BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007742
(591 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/611 (64%), Positives = 465/611 (76%), Gaps = 38/611 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEE------EEEEE 54
M+FDEY+YLEK VEEQ DD + K K E++E+S RKRE EE E+EE
Sbjct: 1 MDFDEYDYLEKAVEEQ-----DDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEV 55
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
K KRSR + ENG + DRD R ++RHRRDR+ + D G+ER++E R RER
Sbjct: 56 KV---KRSR--SEHENG-KEDRDHS-GRARDRHRRDREEETDGGKERDKERNRTRERGSS 108
Query: 115 RR---------------EKEKERER-RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
+ KEKERER ++R+D+E++RER ++ +R R + +
Sbjct: 109 EKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKE 168
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ R R+RE E R R R +RERER++++RESRR KEKK+ EPEADPER
Sbjct: 169 KEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKDTTEPEADPER 228
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMA
Sbjct: 229 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMA 288
Query: 279 IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
IALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G + GPYGA+DRKLYVGNLHFNMTET L
Sbjct: 289 IALSGQLLLGQPVMVKPSEAEKNLVQSNTT-GASGAGPYGAVDRKLYVGNLHFNMTETHL 347
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
R++FE FGPVELVQLPLD+E+G CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSS
Sbjct: 348 REIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSS 406
Query: 399 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 458
VTDH+G Q++ AKS D DDD+GGGLALNAQSRALLMQKLDRTGIATSIAGSLG AP +NG
Sbjct: 407 VTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLG-APVLNG 465
Query: 459 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 518
SA NQ++ SLPV GQ AV P + A P + + +GSPSECLLLKNMFDP+ ET PDFD
Sbjct: 466 SAPNQRSTSLPVNGQAAVAAPVLPANFTPPV-LQSVGSPSECLLLKNMFDPSTETAPDFD 524
Query: 519 LEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 578
+EI+ DVEEECSKYGRVKHIYVDK SAG VYL++++ EAA +AQRAMH+RWFA R IS +
Sbjct: 525 MEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVL 584
Query: 579 FMKPEDYEAKF 589
FM+P+ YEAKF
Sbjct: 585 FMQPQVYEAKF 595
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/611 (64%), Positives = 464/611 (75%), Gaps = 38/611 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEE------EEEEE 54
M+FDEY+YLEK VEEQ DD + K K E++E+S RKRE EE E+EE
Sbjct: 1 MDFDEYDYLEKAVEEQ-----DDRETKKPKRSDSERNEKSTRKREVDEEAGSGGREDEEV 55
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
K KRSR + ENG + DRD R ++RHRRDR+ + D G+ER++E R RER
Sbjct: 56 KV---KRSR--SEHENG-KEDRDHS-GRARDRHRRDREEETDGGKERDKERNRTRERGSS 108
Query: 115 RR---------------EKEKERER-RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
+ KEKERER ++R+D+E++RER ++ +R R + +
Sbjct: 109 EKERERDRDREERDRDRHKEKERERDKDRKDKERDRERHKEKDRERDKDRRDKEREREKE 168
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ R R+RE E R R R +RERER++++RESRR KEKK EPEADPER
Sbjct: 169 KEKERERRDRERREREREEERSRRSRSRSVREREREVDVRESRRMKEKKGTTEPEADPER 228
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMA
Sbjct: 229 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMA 288
Query: 279 IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
IALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G + GPYGA+DRKLYVGNLHFNMTET L
Sbjct: 289 IALSGQLLLGQPVMVKPSEAEKNLVQSNTT-GASGAGPYGAVDRKLYVGNLHFNMTETHL 347
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
R++FE FGPVELVQLPLD+E+G CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSS
Sbjct: 348 REIFEAFGPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSS 406
Query: 399 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 458
VTDH+G Q++ AKS D DDD+GGGLALNAQSRALLMQKLDRTGIATSIAGSLG AP +NG
Sbjct: 407 VTDHIGAQESVAKSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLG-APVLNG 465
Query: 459 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 518
SA NQ++ SLPV GQ AV P + A P + + +GSPSECLLLKNMFDP+ ET PDFD
Sbjct: 466 SAPNQRSTSLPVNGQAAVAAPVLPANFTPPV-LQSVGSPSECLLLKNMFDPSTETAPDFD 524
Query: 519 LEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 578
+EI+ DVEEECSKYGRVKHIYVDK SAG VYL++++ EAA +AQRAMH+RWFA R IS +
Sbjct: 525 MEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVL 584
Query: 579 FMKPEDYEAKF 589
FM+P+ YEAKF
Sbjct: 585 FMQPQVYEAKF 595
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/600 (64%), Positives = 447/600 (74%), Gaps = 46/600 (7%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREE-KSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVEEQ +D DSS KK + KSER+YRK ++ + E RS
Sbjct: 1 MDFDEYEYLEKTVEEQ---PEDKDSSKKKNTDITDIKSERTYRKHGIDDDLDGGEDRRS- 56
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHR------RDRDRDRDRG-RERERETERDRERS 112
KRSR +DE NGS++DRDRDRDR+++R R R+RD +RG RE+ERE + +R
Sbjct: 57 KRSRGGDDE-NGSKKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGR 115
Query: 113 RERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+ R++E+E+ER R ++ RD ER R + R S SR ER+R
Sbjct: 116 DKERDREREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDR---- 171
Query: 173 ERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKA
Sbjct: 172 ------------------GERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVM 292
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVM
Sbjct: 214 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVM 273
Query: 293 VKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
VKPSEAEKNLVQSN S+G GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQ
Sbjct: 274 VKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQ 333
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKS 412
LPLD+ETG CKGFGFVQFA LEHAKAAQS LNGKLEI GRT+KVSSVTDHVG+QDT KS
Sbjct: 334 LPLDMETGHCKGFGFVQFAHLEHAKAAQS-LNGKLEIAGRTIKVSSVTDHVGSQDTTTKS 392
Query: 413 ADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 472
ADFDDD+ GGL LNA SRALLMQ+L T I TSI P VNGS QQA S+P G
Sbjct: 393 ADFDDDE-GGLTLNAHSRALLMQRLAGTDITTSIG-----VPTVNGSVPVQQAFSMP-FG 445
Query: 473 QPAVPVPAVTAP--VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 530
P V +PA P V+P AE +G PSECLLLKNMFDP+ E +PDFD++I+ DVEEECS
Sbjct: 446 NPGV-IPASVLPTQVMPTPVAEPVGIPSECLLLKNMFDPSTEIEPDFDIDIKEDVEEECS 504
Query: 531 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
KYGRV HIYVDKRSAGFVYL+FE+ EA+++AQRAMHMRWFARRLI+AIFM+P YEAKFK
Sbjct: 505 KYGRVMHIYVDKRSAGFVYLQFETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKFK 564
>gi|297811089|ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319265|gb|EFH49687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/596 (62%), Positives = 423/596 (70%), Gaps = 81/596 (13%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEE----EEKS 56
MEFDEYEYLEKTVEE D S+ K++ EKSERSYRKRE E +E EE+
Sbjct: 1 MEFDEYEYLEKTVEE------GDGSNKNKESSGNEKSERSYRKREGGERHDEEGGDEERG 54
Query: 57 RSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
S + R + EENG R ERHR RD+DR+ R++ RE RD+E RER
Sbjct: 55 SSRSKKSRGDGEENGKR-----------ERHRSSRDKDRE--RDKVREGSRDKESDRERS 101
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR-SRRERERESERERE 175
KE R+R DR+K R+RER R SS R + R R SRR ++++ E
Sbjct: 102 SKE-----RDRSDRDKTRDRERRERERRSSSRSRREEREREVVERGSRRHKDKKDE---- 152
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
PEADPERDQRTVFAYQMPLKATER
Sbjct: 153 ------------------------------------PEADPERDQRTVFAYQMPLKATER 176
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LGQPVMVKP
Sbjct: 177 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPFLGQPVMVKP 236
Query: 296 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
SEAEKNL QSNT+ GGT G +DRKLYVGNLHFNMTE QLR++FE FGPVELVQLPL
Sbjct: 237 SEAEKNLAQSNTTPGGT-----GPVDRKLYVGNLHFNMTELQLRQIFEAFGPVELVQLPL 291
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF 415
D ETGQCKGFGF+QFAQLEH+KAAQ +LNGKLEI GRT+KVSSV+DH+GTQD A KSADF
Sbjct: 292 DPETGQCKGFGFIQFAQLEHSKAAQISLNGKLEIAGRTIKVSSVSDHIGTQDAAPKSADF 351
Query: 416 DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 475
DDDDGGGLALNAQSRALLMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+
Sbjct: 352 DDDDGGGLALNAQSRALLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PS 404
Query: 476 VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRV 535
P P + IP+ E +G PSECLLLKNMFDPA ET+ DFD EI+ DV +ECSKYG V
Sbjct: 405 FPTPVLPTTAIPSFVNEPVGQPSECLLLKNMFDPATETERDFDFEIREDVADECSKYGEV 464
Query: 536 KHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
HIYVDK SAGFVYLRF+S EAA +AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 465 NHIYVDKNSAGFVYLRFQSVEAAVAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 520
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/430 (76%), Positives = 367/430 (85%), Gaps = 26/430 (6%)
Query: 165 ERERES-ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R+RE ER RE+E RESRR+K+KKE VEPEADPERDQRTV
Sbjct: 94 DRDRELRERSREIE-------------------PRESRRFKDKKEAVEPEADPERDQRTV 134
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG 283
FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSG
Sbjct: 135 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSG 194
Query: 284 QLLLGQPVMVKPSEAEKNLVQSNTS---AGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
LL GQPVMVKPSEAEKNLVQSN S +GG A GPYGA+DRKLYVGNLHFNMTE QLR+
Sbjct: 195 HLLHGQPVMVKPSEAEKNLVQSNASGAVSGGIA-GPYGAVDRKLYVGNLHFNMTELQLRQ 253
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
+FEPFG VELVQLPLD+ETGQCKGFGFVQFA+LEHAKAAQ+ LNGKL+I GR +KVSSVT
Sbjct: 254 IFEPFGRVELVQLPLDLETGQCKGFGFVQFAELEHAKAAQN-LNGKLDIAGRIIKVSSVT 312
Query: 401 DHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 460
DH+G QD AK+ADFDDDDGGGL+LNAQSRALLMQKLDRTGIA+SIAGSLGV P +NGSA
Sbjct: 313 DHIGVQDAGAKAADFDDDDGGGLSLNAQSRALLMQKLDRTGIASSIAGSLGV-PMLNGSA 371
Query: 461 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLE 520
NQQAISL + GQ AV PA+ V+ + A+E +G+P+ECLLLKNMFDPA E DPDFDL+
Sbjct: 372 PNQQAISLSINGQAAVSAPALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLD 431
Query: 521 IQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
I+ +V+EECS +GRVKHIYV+K SAG+VYLRFE+ EAA +AQRAMHMRWFARRLISAIF+
Sbjct: 432 IKEEVQEECSNFGRVKHIYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFL 491
Query: 581 KPEDYEAKFK 590
+P DYEAKFK
Sbjct: 492 QPRDYEAKFK 501
>gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 372/596 (62%), Positives = 429/596 (71%), Gaps = 74/596 (12%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEEGA------GSNKKKEESGNERSERSYRKREGVERQGEEGGEEERV 54
Query: 61 RSR----RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
SR R + EENG + RDR+R++ R RD+DR+RD+ RE R
Sbjct: 55 SSRSKKSRGDGEENGGGK---RDRERERHRSSRDKDRERDKVREGS-------------R 98
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
+KE +RER + ERD RS R++ R+ ER
Sbjct: 99 DKESDRERSSK---------ERD---------------------RSDRDKPRDRERRER- 127
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERD 236
E+ E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATERD
Sbjct: 128 --EKRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATERD 183
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 296
VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL LGQPVMVKPS
Sbjct: 184 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPS 243
Query: 297 EAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
EAEKNL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPL
Sbjct: 244 EAEKNLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPL 298
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF 415
D ETGQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADF
Sbjct: 299 DPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADF 358
Query: 416 DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 475
DDDDGGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+
Sbjct: 359 DDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PS 411
Query: 476 VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRV 535
P + IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V
Sbjct: 412 FPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPV 471
Query: 536 KHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
HIYVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 472 NHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 527
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 380/597 (63%), Positives = 443/597 (74%), Gaps = 53/597 (8%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVEE + SKKK +KSERSYRK +++ + R K
Sbjct: 1 MDFDEYEYLEKTVEEDIDKDS-----SKKKKDITDKSERSYRKPR-DVDDDLDADDRKSK 54
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKE------RHRRDRDRDRDRGRERERETERDRERSRE 114
RSR D DE GS++DRDRDR+RD++ RHR +R+RD +R + RD+++ ++
Sbjct: 55 RSRGD-DENGGSKKDRDRDRERDRDRERSSGRHRSERERDGERKDRDKDRERRDKDKDKD 113
Query: 115 RREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERER 174
R R+R DREKERER RD +++ERE E+E
Sbjct: 114 RDRDRDRRDRDRDGDREKERER-RD------------------------KDKEREGEKEA 148
Query: 175 ELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATE 234
R R R R+RERD EMR+ RR++ KKE EPEADPERDQRTVFAYQMPLKATE
Sbjct: 149 RERSTRSRSRSERDRDRERDFEMRDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATE 208
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK 294
RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVMVK
Sbjct: 209 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVK 268
Query: 295 PSEAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
PSEAEKNLVQSN + GPYGA+DRKLYVGNLHFNMTE+QLR++FEPFGPVE+VQL
Sbjct: 269 PSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQL 328
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA 413
PLD+ETG CKGFGFVQF LEHAKAAQS LNGKLEI GRT+KVS VTDHV +QD AKSA
Sbjct: 329 PLDLETGHCKGFGFVQFTHLEHAKAAQS-LNGKLEIAGRTIKVSCVTDHVASQDATAKSA 387
Query: 414 DFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQ 473
D DDD+ GGL LNA SRALLMQ+L A + S+G+ P VNGS QQAISLP +G
Sbjct: 388 DLDDDE-GGLTLNAHSRALLMQRL-----AGADPASIGL-PVVNGSVPAQQAISLP-IGA 439
Query: 474 PAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 533
P +P V+PN E +G+PSECLLLKNMFDP+ ET+PDFD++I+ DVEEECSKYG
Sbjct: 440 PVLP-----TLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYG 494
Query: 534 RVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
RVKHI+VDK+SAGFVYLRF++ EAA++AQ AMH+RWFARRLISA+FM+PE YEAKFK
Sbjct: 495 RVKHIFVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKFK 551
>gi|18416114|ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein [Arabidopsis thaliana]
gi|332004077|gb|AED91460.1| RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 372/597 (62%), Positives = 430/597 (72%), Gaps = 76/597 (12%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEK----- 55
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEEGA------GSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 56 SRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER 115
S K+SR D +E G +RDR+R+ + R RD+DR+RD+ RE
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERE----RHRSSRDKDRERDKVREGS------------- 97
Query: 116 REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
R+KE +RER + ERD RS R++ R+ ER
Sbjct: 98 RDKESDRERSSK---------ERD---------------------RSDRDKPRDRERRER 127
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
E+ E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATER
Sbjct: 128 ---EKRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATER 182
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL LGQPVMVKP
Sbjct: 183 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKP 242
Query: 296 SEAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
SEAEKNL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLP
Sbjct: 243 SEAEKNLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLP 297
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 414
LD ETGQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSAD
Sbjct: 298 LDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSAD 357
Query: 415 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 474
FDDDDGGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P
Sbjct: 358 FDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------P 410
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGR 534
+ P + IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG
Sbjct: 411 SFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGP 470
Query: 535 VKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
V HIYVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 471 VNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 527
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 335/474 (70%), Positives = 379/474 (79%), Gaps = 22/474 (4%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
E E E+ E E +++DG +S RS R R E R RER
Sbjct: 5 EYEYLEKAVEEPENRKKKDGGEKSE-RSYRKREGGEEDDDDERGEGRRSKRRERH----- 58
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E++R R R+ ER+ + RR+K+KKE VEPEADPERDQRTVFAYQMPLKATERDVYEF
Sbjct: 59 EKDRRRSGRDGERE---SKGRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEF 115
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSG LL GQPVMVKPSEAEK
Sbjct: 116 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEK 175
Query: 301 NLVQSNTS---AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 357
NLVQSN S +GG A GPYGA+DRKLYVGNLHFNMTE QLR++FEPFG VELVQLPLD+
Sbjct: 176 NLVQSNASGAVSGGIA-GPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQLPLDL 234
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD 417
ETGQCKGFGFVQFA+LEHAKAAQ+ LNGKL+I GR +KVSSVTDH+G QD AK+ADFDD
Sbjct: 235 ETGQCKGFGFVQFAELEHAKAAQN-LNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDD 293
Query: 418 DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP 477
DDGGGL+LNAQSRALLMQKLDRT GSLGV P +NGSA NQQAISL + GQ AV
Sbjct: 294 DDGGGLSLNAQSRALLMQKLDRT-------GSLGV-PMLNGSAPNQQAISLSINGQAAVS 345
Query: 478 VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKH 537
PA+ V+ + A+E +G+P+ECLLLKNMFDPA E DPDFDL+I+ +V+EECS +GRVKH
Sbjct: 346 APALPTQVVTSPASEPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKH 405
Query: 538 IYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
IYV+K SAG+VYLRFE+ EAA +AQRAMHMRWFARRLISAIF++P DYEAKFK
Sbjct: 406 IYVEKHSAGYVYLRFETVEAAVTAQRAMHMRWFARRLISAIFLQPRDYEAKFKG 459
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEK VEE +K+ D EKSERSYRKRE EE++++E+ +
Sbjct: 1 MDFDEYEYLEKAVEEPENRKKKDGG---------EKSERSYRKREGGEEDDDDERGEGRR 51
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDR 109
RR+ E++ R RD +R+ R +D+ E E + ERD+
Sbjct: 52 SKRRERHEKDRRRSGRDGERESKGRRF-----KDKKEAVEPEADPERDQ 95
>gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 604
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 366/586 (62%), Positives = 422/586 (72%), Gaps = 76/586 (12%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEK----- 55
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 56 SRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER 115
S K+SR D +E G +RDR+R+ + R RD+DR+RD+ RE
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERE----RHRSSRDKDRERDKVREGS------------- 97
Query: 116 REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
R+KE +RER + ERD RS R++ R+ ER
Sbjct: 98 RDKESDRERSSK---------ERD---------------------RSDRDKPRDRERRER 127
Query: 176 LELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATER 235
E+ E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATER
Sbjct: 128 ---EKRSSSRSRREEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATER 182
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 295
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL LGQPVMVKP
Sbjct: 183 DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKP 242
Query: 296 SEAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
SEAEKNL QSN T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLP
Sbjct: 243 SEAEKNLAQSNSTTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLP 297
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 414
LD ETGQCKGFGF+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSAD
Sbjct: 298 LDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSAD 357
Query: 415 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 474
FDDDDGGGLALNAQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P
Sbjct: 358 FDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------P 410
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGR 534
+ P + IP+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG
Sbjct: 411 SFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGP 470
Query: 535 VKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
V HIYVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM
Sbjct: 471 VNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFM 516
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 315/382 (82%), Positives = 338/382 (88%), Gaps = 3/382 (0%)
Query: 201 RRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
RR+KEKKEVVEPEADPERDQRTVF YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR
Sbjct: 1 RRFKEKKEVVEPEADPERDQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 60
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYG 318
SKGVGY+EFYD MSVPMAI LSGQLLLGQPVMVKPSEAEKNLVQ + S GGT P+G
Sbjct: 61 SKGVGYVEFYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFG 120
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
A+DRKLYVGNLHFNMTE QLR+LFEPFG VELVQLPLD+ETGQCKGFGFVQF QLE+AKA
Sbjct: 121 AVDRKLYVGNLHFNMTEMQLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAKA 180
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 438
AQSALNGKLEI GRT+KVSSVT+H G QD+ KSADFDDDDGGGLALNAQSRALLMQKLD
Sbjct: 181 AQSALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLD 240
Query: 439 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 498
RTG ATSIAGSLGV P +NGSA NQQAISLPV GQ + A A V+P+ A E IG PS
Sbjct: 241 RTGTATSIAGSLGV-PLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPS 299
Query: 499 ECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAA 558
ECLLLKNMFDPA ET+PDFDL+I+ DVEEECS+YG+VKHI+VDK SAG VYL+F+S EAA
Sbjct: 300 ECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEAA 359
Query: 559 ASAQRAMHMRWFARRLISAIFM 580
A AQRAMHMRWFARR I AIFM
Sbjct: 360 ARAQRAMHMRWFARRSILAIFM 381
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/399 (74%), Positives = 329/399 (82%), Gaps = 12/399 (3%)
Query: 196 EMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
E R+ RR+++KK+ VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD
Sbjct: 1 ENRDGRRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 60
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT-AT 314
RNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN ++G T
Sbjct: 61 RNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVT 120
Query: 315 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 374
GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD+ETG CKGFGFVQFA LE
Sbjct: 121 GPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLE 180
Query: 375 HAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLM 434
HAKA+ S K+ K SSVTDHVG+QDT AKSADFDDD+ GGL LNA SRALLM
Sbjct: 181 HAKAS-SEFKWKIGDCWPNNKGSSVTDHVGSQDTTAKSADFDDDE-GGLTLNAHSRALLM 238
Query: 435 QKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP--VIPNMAAE 492
Q+L I TSI P VNG QQA SLP +G P V +PA P V+P E
Sbjct: 239 QRLAGADIPTSIG-----VPMVNGPVPVQQAFSLP-IGNPGV-IPAQVLPAQVMPTPVVE 291
Query: 493 FIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRF 552
+G PSECLLLKNMFDP+ ET+PDFDL+I+ DVEEECSKYGRVKHIYVDKRSAGFVYLRF
Sbjct: 292 PVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLRF 351
Query: 553 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
E+ EA+++AQRAMHMRWFARRLI+AIFM+P YEAKFK
Sbjct: 352 ETVEASSAAQRAMHMRWFARRLITAIFMQPHLYEAKFKG 390
>gi|227206234|dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
Length = 505
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 316/465 (67%), Positives = 361/465 (77%), Gaps = 32/465 (6%)
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERE-----------------RE 187
SSRS++S + R R+ + ER++ RE
Sbjct: 55 SSRSKKSRGDGEENGGGKRDRERERHRSSRDKDRERDKVREGSRDKERREREKRSSSRSR 114
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
E+E ++ R SRR+++KK+ EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV
Sbjct: 115 REEKEPEVVERGSRRHRDKKD--EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 172
Query: 248 RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN- 306
RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL LGQPVMVKPSEAEKNL QSN
Sbjct: 173 RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNS 232
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
T+ GGT G DRKLYVGNLHFNM+E QLR++FE FGPVELVQLPLD ETGQCKGFG
Sbjct: 233 TTVGGT-----GPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFG 287
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 426
F+QF QLEH+KAAQ ALNGKLEI GRT+KVSSV+DH+GTQD+A KSADFDDDDGGGLALN
Sbjct: 288 FIQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALN 347
Query: 427 AQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI 486
AQSRA+LMQKLDR+GIATSI GSLGV P +NG+A NQ ++ P+ P + I
Sbjct: 348 AQSRAMLMQKLDRSGIATSIVGSLGV-PGLNGAAFNQPGMN------PSFPTSVLPTTAI 400
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAG 546
P+ E +G PSECLLLKNMFDPA ET+P+FDLEI+ DV +ECSKYG V HIYVDK SAG
Sbjct: 401 PSFVNEHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAG 460
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
FVYLRF+S EAAA+AQRAMHMRWFA+++ISA FM P +YEAK K+
Sbjct: 461 FVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAKAKA 505
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 153/322 (47%), Gaps = 51/322 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEE------ 54
MEFDEYEYLEKTVEE S+ KK+ E+SERSYRKRE E + EE
Sbjct: 1 MEFDEYEYLEKTVEE------GAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERV 54
Query: 55 KSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE 114
SRS K+SR D +E G +RD R+R++ R RD+DR+RD+ RE R+ ER R
Sbjct: 55 SSRS-KKSRGDGEENGGGKRD----RERERHRSSRDKDRERDKVREGSRDKERREREKRS 109
Query: 115 RREKEKER------ERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERER 168
+E ER RR R+K+ E E D ER R+ + +++ R E
Sbjct: 110 SSRSRREEKEPEVVERGSRRHRDKKDEPEADPER--DQRTVFAYQMPLKATERDVYEFFS 167
Query: 169 ESERERELELERERERER----------ELRERERDLEMRESRRYKEKKEVVEP-EADPE 217
++ + R++ L +R R ++ + + + + + +V+P EA+
Sbjct: 168 KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL-SGQLFLGQPVMVKPSEAEKN 226
Query: 218 RDQ-------------RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
Q R ++ + +E + + F G V V+L +D + + KG
Sbjct: 227 LAQSNSTTVGGTGPADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGF 286
Query: 265 GYIEFYDV-MSVPMAIALSGQL 285
G+I+F + S IAL+G+L
Sbjct: 287 GFIQFVQLEHSKAAQIALNGKL 308
>gi|224081877|ref|XP_002306512.1| predicted protein [Populus trichocarpa]
gi|222855961|gb|EEE93508.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/365 (81%), Positives = 324/365 (88%), Gaps = 3/365 (0%)
Query: 228 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
MPLK TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY+EFYD MSVPMAIALSGQLL
Sbjct: 1 MPLKVTERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLF 60
Query: 288 GQPVMVKPSEAEKNLVQSNTSAGGT--ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 345
GQPVMVKPSEAEKNLVQS+ S+GGT GP+G +DRKLYVGNLHFNMTE QLR+LFEPF
Sbjct: 61 GQPVMVKPSEAEKNLVQSSASSGGTSGVAGPFGPVDRKLYVGNLHFNMTEMQLRQLFEPF 120
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 405
G VELVQLPLD+ETGQCKGFGFVQF QLE+AKAAQSALNGKLEI GRT+KVSSVT+H G
Sbjct: 121 GTVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQ 180
Query: 406 QDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA 465
QDT AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV P +NGSA NQQA
Sbjct: 181 QDTGAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV-PLLNGSASNQQA 239
Query: 466 ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 525
ISLP++GQ A+ A+ APV+ + A E IG PSECL+LKNMFDPA ET+PDFDL+I+ DV
Sbjct: 240 ISLPIIGQTAIGAAALPAPVLSSPAYEPIGQPSECLMLKNMFDPATETEPDFDLDIKEDV 299
Query: 526 EEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 585
EEECSKYG+V+HI+VDK S G VYLRF S EAAA AQRAMHMRWFARRLI A+FM +Y
Sbjct: 300 EEECSKYGQVEHIFVDKNSTGCVYLRFGSIEAAAGAQRAMHMRWFARRLILAVFMPTREY 359
Query: 586 EAKFK 590
EA+F+
Sbjct: 360 EARFQ 364
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 346/621 (55%), Positives = 426/621 (68%), Gaps = 48/621 (7%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEE-----EK 55
M+FDEY+YLEKTVE QK + + + + + ERS + SE+ +++ ++
Sbjct: 1 MDFDEYDYLEKTVENPESQKVKETVNGGDETVKSGEKERSRSSKHKSEDNDDDLDRRLKR 60
Query: 56 SRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERD-RERSR 113
S+SG SR D +E GS R RD +++RHR R+ ER+ +ER R
Sbjct: 61 SKSGDDSRDHDRRKERGSSHPRSSSRDGERDRHRSSREHRERDRDRDRDREERNGKERDR 120
Query: 114 ERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERE 173
E+ + R+RR+R++E ERER+ ER R S + S R ++RER +RE
Sbjct: 121 EKDRNRERDRDRDRRERDRESERERERERERERSRRSRSRSEKHLSERDEKDRERSRDRE 180
Query: 174 RELELERERERERELRERERDLEMRESRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKA 232
+ RER+ RE+RR+K+KKE V EPEADPERDQRTVFAYQ+ LKA
Sbjct: 181 NKEREREREIRERD----------RETRRHKDKKEEVAEPEADPERDQRTVFAYQICLKA 230
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVM 292
ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQ LLGQPVM
Sbjct: 231 DERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVM 290
Query: 293 VKPSEAEKNLVQSNTSAGGTA---TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
VKPSEAEKNLVQS T+A G GPY R+LYVGNLHFN+TE QLR++FEPFG VE
Sbjct: 291 VKPSEAEKNLVQSTTAAAGGPGGLIGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVE 350
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 409
LVQLP D+ETG CKGFGFVQFA+LE A+AAQS LNG+L+I GRT+KVS VTD G QD
Sbjct: 351 LVQLPTDLETGHCKGFGFVQFARLEDARAAQS-LNGQLDIAGRTIKVSVVTDQAGLQDIG 409
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG------------VAPAVN 457
A + DFDDD+GGGL+LNA+SRA+LMQKLDR+G IAGSLG AP +
Sbjct: 410 ANAGDFDDDEGGGLSLNARSRAILMQKLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILG 469
Query: 458 GSAVNQQAIS----LPVVGQPAVP-----VPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 508
+ V ++ PV G +P VPAVT P I + IG PSECL+LKNMFD
Sbjct: 470 AAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSI-----DTIGVPSECLMLKNMFD 524
Query: 509 PAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMR 568
P +ET+PDFDL+I+ DV++ECSK+G VKHIYVDK SAGFV+LRFE+T+AA SAQRA+H R
Sbjct: 525 PKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDKNSAGFVFLRFENTQAAISAQRALHGR 584
Query: 569 WFARRLISAIFMKPEDYEAKF 589
WFA ++I+A FM P++YEAKF
Sbjct: 585 WFAGKMITATFMLPQNYEAKF 605
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 335/606 (55%), Positives = 410/606 (67%), Gaps = 38/606 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE + +K +S + D EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSVPST---NGGGEKDRSSRRRSSTAGGGGRDQEE-------RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQP 290
KA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL+GQ LLGQ
Sbjct: 229 KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQA 288
Query: 291 VMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
VMVKPSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VEL
Sbjct: 289 VMVKPSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVEL 344
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA 410
VQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q
Sbjct: 345 VQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGT 402
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN-------GSAVNQ 463
+ D DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N SA+
Sbjct: 403 TTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLNSSVGLPAASALGA 461
Query: 464 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
+ ++ QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+
Sbjct: 462 PLTAASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIRD 519
Query: 524 DVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 583
DV+EECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM
Sbjct: 520 DVQEECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAH 579
Query: 584 DYEAKF 589
YE KF
Sbjct: 580 QYEMKF 585
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 338/607 (55%), Positives = 412/607 (67%), Gaps = 40/607 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE + +K +S + D EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSVPST---NGGGEKDRSSRRRSSTAGGGGRDQEE-------RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQP 290
KA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL+GQ LLGQ
Sbjct: 229 KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQA 288
Query: 291 VMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
VMVKPSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VEL
Sbjct: 289 VMVKPSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVEL 344
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA 410
VQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q
Sbjct: 345 VQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGT 402
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL-- 468
+ D DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S+V A S+
Sbjct: 403 TTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLN-SSVGLPAASVLG 460
Query: 469 -PVVG-----QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
P+ QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+
Sbjct: 461 APLTAASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIR 518
Query: 523 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV+EECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM
Sbjct: 519 DDVQEECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTA 578
Query: 583 EDYEAKF 589
YE KF
Sbjct: 579 HQYEMKF 585
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 329/622 (52%), Positives = 410/622 (65%), Gaps = 62/622 (9%)
Query: 1 MEFDEYEYLEKTVEE-QRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLE VE Q + + + S K +R ++ +D + + + S+ G
Sbjct: 1 MDFDEYEYLENAVENPQAKHRANGGDKSVKSEERGRNGSSKHKGDDDDDVDLHPKHSKPG 60
Query: 60 KRSRRDED--EENGSRRDRDRDRDRDKERH--------------RRDRDRDRDRGRERER 103
S E E+ GS R + RD DK+R ++DR RD G ++
Sbjct: 61 DDSHDRERLREKRGSSRHGSKSRDGDKDRSSGGIRDRKRDRDRDHENKDRKRDHG---DK 117
Query: 104 ETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSR 163
+ +RDRER R+ ++ R + E+++ +R + + R +SR R
Sbjct: 118 DVKRDRERDRDHGRDQERDRRDRGSEAERQQRSRSRSDRHRTDLDDKD-----RETSRDR 172
Query: 164 RERERESERERELELERERERERELRERERDLEMRESRRYKEKKE-VVEPEADPERDQRT 222
R+ E R+++ ++R R RE RER+R + RR+KEKKE EPEADPERDQRT
Sbjct: 173 EYRDIERSRDKDY---KDRGRVRESRERDR-----QDRRHKEKKEEATEPEADPERDQRT 224
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
VFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS
Sbjct: 225 VFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 284
Query: 283 GQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT---GPYGAIDRKLYVGNLHFNMTETQLR 339
GQ LLGQPVMVKPSEAEKNLVQS TS T GPY RKLYVGNLH ++TE +R
Sbjct: 285 GQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHVSITEADIR 344
Query: 340 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 399
++FE FG VELVQLPLD E+G CKGFGFVQFA+LE A+ AQS LNG+LEI GRT+KVS+V
Sbjct: 345 RVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQS-LNGQLEIGGRTIKVSAV 402
Query: 400 TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 459
TD G Q+ + DFDDD+GGGL+LNA SRA+LMQKLDR+G A+S+ GS+G S
Sbjct: 403 TDQSGMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDRSGTASSMVGSIG------NS 456
Query: 460 AVNQQAISLPVVGQ--PAVPV----------PAVTAPVIPNMAAEFIGSPSECLLLKNMF 507
VN ++LP G A PV P T P I + IG PSECL+LKNMF
Sbjct: 457 GVNNTGLNLPATGNILAAAPVGGLAGGGLQIPTATIPSI-----DPIGVPSECLMLKNMF 511
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
DP ET+PDFDL+I+ DVE ECSK+G +KHIYVDK+SAGFVYLRFE T++A SAQ+A+H
Sbjct: 512 DPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKSAGFVYLRFEDTQSAISAQQALHG 571
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
RWFA ++I+A FM P+ YE KF
Sbjct: 572 RWFAGKMITASFMVPQSYEDKF 593
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 337/607 (55%), Positives = 411/607 (67%), Gaps = 40/607 (6%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEK VE + +K +S + D EE R K
Sbjct: 1 MDFDEYDYLEKAVEPSVPST---NGGGEKDRSSRRRSSTAGGGGRDQEE-------RGSK 50
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER----- 115
R R ED E RDR+ KE+ R++ R++D GR+RE+ E+D RSRE+
Sbjct: 51 RPRSGEDRERHRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKD 110
Query: 116 --REKEKERERRERRDREKERERE--RDGER-RSSSRSRRSSSQSRRSSSRSRRERERES 170
R+ EK RE+ E RDREK RE++ RD E+ R R R R + R E
Sbjct: 111 ESRDPEKVREKEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSER 170
Query: 171 ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPL 230
R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q+ L
Sbjct: 171 RRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSL 228
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQP 290
KA ERD YEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL+GQ LLGQ
Sbjct: 229 KADERDAYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQA 288
Query: 291 VMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
VMVKPSEAEKNL QSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VEL
Sbjct: 289 VMVKPSEAEKNLAQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVEL 344
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA 410
VQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q
Sbjct: 345 VQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQ-LGT 402
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL-- 468
+ D DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S+V A S+
Sbjct: 403 TTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLN-SSVGLPAASVLG 460
Query: 469 -PVVG-----QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
P+ QP VP P+I A IG+P+E LLLKNMFDP++ETDPDFDL+I+
Sbjct: 461 APLTAASLLVQPVGAVPGAPLPIISQSAD--IGTPTEFLLLKNMFDPSVETDPDFDLDIR 518
Query: 523 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV+EECSK+G VKHI+VDK +AGFVYL F+S AAASAQR++H RWFA ++I+A FM
Sbjct: 519 DDVQEECSKFGVVKHIFVDKHTAGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTA 578
Query: 583 EDYEAKF 589
YE KF
Sbjct: 579 HQYEMKF 585
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 280/415 (67%), Positives = 324/415 (78%), Gaps = 31/415 (7%)
Query: 200 SRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNS 258
RR+K+KKE V EPEADPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNS
Sbjct: 15 CRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNS 74
Query: 259 RRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA---TG 315
RRSKGVGYIEFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G G
Sbjct: 75 RRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIG 134
Query: 316 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
PY R+LYVGNLHFN+TE QLR++FEPFG VELVQLP D+ETG CKGFGFVQFA+LE
Sbjct: 135 PYSGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLED 194
Query: 376 AKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 435
A+AAQS LNG+L+I GRT+KVS VTD G QD A + DFDDD+GGGL+LNA+SRA+LMQ
Sbjct: 195 ARAAQS-LNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQ 253
Query: 436 KLDRTGIATSIAGSLG------------VAPAVNGSAVNQQAIS----LPVVGQPAVP-- 477
KLDR+G IAGSLG AP + + V ++ PV G +P
Sbjct: 254 KLDRSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGA 313
Query: 478 ---VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGR 534
VPAVT P I + IG PSECL+LKNMFDP +ET+PDFDL+I+ DV++ECSK+G
Sbjct: 314 GLQVPAVTVPSI-----DTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGT 368
Query: 535 VKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VKHIYVDK SAGFV+LRFE+T+AA SAQRA+H RWFA ++I+A FM P++YEAKF
Sbjct: 369 VKHIYVDKNSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKF 423
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 334/615 (54%), Positives = 414/615 (67%), Gaps = 50/615 (8%)
Query: 1 MEFDEYEYLEKTVE-----EQRQQKQDDDSSSKKKAKREEKSERSYR--KREDSEEEEEE 53
M+FDEY+YLEK VE ++D S + ++ R KR S E+ E
Sbjct: 1 MDFDEYDYLEKAVEPPVPSTNGAGEKDRSSRRRSSTGGGGGRDQDERGSKRPRSGEDRER 60
Query: 54 EKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRGRERERETERDRE 110
+S R R D E++GSR DR++ R++D+ R R R++D R R + RE++ RD E
Sbjct: 61 HRSSREHRDRDDGKEKDGSR-DREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPE 119
Query: 111 RSRER---REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERE 167
+ RE+ R++EK RE+ RDR+K RE+ERDG R R + R
Sbjct: 120 KVREKDEGRDREKIREKDSSRDRDKVREKERDG---------RDRLMERENGRERRSRSR 170
Query: 168 RESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQ 227
E R E E+ RE +RERE +R R + R+ ++K + EPE DPERDQRTVFA+Q
Sbjct: 171 SERRRGEEEEMVRELQRERERSDRHR--DYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQ 228
Query: 228 MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL+GQ LL
Sbjct: 229 LSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLL 288
Query: 288 GQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGP 347
GQ VMVKPSEAEKNL QSN ++GG A+ RKLYVGNLH N+TE QLR++FEPFG
Sbjct: 289 GQAVMVKPSEAEKNLAQSNAASGGAAS----GGARKLYVGNLHSNITEDQLRQVFEPFGQ 344
Query: 348 VELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQD 407
VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTD G Q
Sbjct: 345 VELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDQGGVQL 403
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA-- 465
+ D DDD+GGGLALNA SRALLM+KLDR+G ATS+ G +G AP +N S A
Sbjct: 404 GGTTTGDLDDDEGGGLALNASSRALLMRKLDRSGTATSLTGGIG-APGLNTSVGLPAASV 462
Query: 466 -----------ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
++P VG VP PVI A IG+P+E LLLKNMFDPA+ETD
Sbjct: 463 FGAPLAAASLAPTIPTVGA----VPGAPLPVISQSAD--IGTPTEFLLLKNMFDPAVETD 516
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRL 574
PDFDL+I+ DV+EECSK+G VKHI+VDK +AGFVYL F+S+ AA SAQR++H RWFA ++
Sbjct: 517 PDFDLDIRDDVQEECSKFGVVKHIFVDKHTAGFVYLHFDSSTAATSAQRSLHGRWFAGKM 576
Query: 575 ISAIFMKPEDYEAKF 589
I+A FM + YE KF
Sbjct: 577 ITATFMTAQQYEMKF 591
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 326/629 (51%), Positives = 398/629 (63%), Gaps = 73/629 (11%)
Query: 1 MEFDEYEYLEKTVE--EQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRS 58
M+FDEYEYLEK VE E + D + K + + S + +D + S+S
Sbjct: 1 MDFDEYEYLEKAVENPEVNHRANGGDKNVKSEERGRNGSSKHKDDDDDDVVDLHPRHSKS 60
Query: 59 GKRSRRDEDEENGSRRDRDRDRDRDKERH---RRDRDRDRDRG-------RERERETERD 108
G SR DR+R R+R H RD D+DR+ G +D
Sbjct: 61 GDNSR-----------DRERQRERGSTLHGSKSRDGDKDRNSGGSRDRRRDRDRDHENKD 109
Query: 109 RERSRERREKEKERERRERRDRE-------------KERERERDGERRSSSRSRRSSSQS 155
R+R +ER +K+ +R RDR+ E E+E+ RS +
Sbjct: 110 RKRDKERDHGDKDMKRDRERDRDRNRDQERDRRDRGSEAEQEQRSRSRSDRLRTDLDDKD 169
Query: 156 RRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEAD 215
R +S S R+++ ++RER RE RE +R E+RR+KEKKE AD
Sbjct: 170 REASRDREYRDRERS-RDKDY---KDRERVRESREHDR-----ENRRHKEKKEETTEPAD 220
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PERDQR VFAYQ+ LKA ERDV+EFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV
Sbjct: 221 PERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 280
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT---GPYGAIDRKLYVGNLHFN 332
PMAIALSGQ LLGQPVMVKPSEAEKNLVQS TS T GPY RKLYVGNLH +
Sbjct: 281 PMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYSGGARKLYVGNLHIS 340
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE +R++FE FG VELVQLPLD E+G CKGFGFVQFA+LE A+ AQS LNG+LEI GR
Sbjct: 341 ITEADIRRVFEAFGQVELVQLPLD-ESGHCKGFGFVQFARLEDARNAQS-LNGQLEIGGR 398
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 452
T+KVS+VTD G Q+ + DFDDD+GGG++LNA SRA+LMQKLDR+G A+S+ GSLG
Sbjct: 399 TIKVSAVTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRSGTASSMVGSLG- 457
Query: 453 APAVNGSAVNQQAISLPVVGQ--PAVPV----------PAVTAPVIPNMAAEFIGSPSEC 500
S VN ++LP G A PV P T P I + IG SEC
Sbjct: 458 -----NSVVNNTGLNLPATGNILAAAPVGELAGGGLQIPTATIPSI-----DTIGVASEC 507
Query: 501 LLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 560
L+LKNMFDP E +PDFDL+I+ DVE ECSK G +KHIYVDK+SAGFVYLRFE T++A S
Sbjct: 508 LMLKNMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSAGFVYLRFEDTQSAIS 567
Query: 561 AQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AQ+A+H RWFA ++I+A FM P+ YE KF
Sbjct: 568 AQQALHGRWFAGKMITASFMVPQSYEDKF 596
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 261/387 (67%), Positives = 308/387 (79%), Gaps = 17/387 (4%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP
Sbjct: 222 ERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 281
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
MAIALSGQ LLGQPVMVKPSEAEKNLVQS T+ +GPY R+LYVGNLHFN+TE
Sbjct: 282 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTTV-NAGSGPYSGGARRLYVGNLHFNITED 340
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
QLR++FEPFG VELVQLPLD ETG CKGFGFVQFA+LE AK A + LNG++EI GR +KV
Sbjct: 341 QLRQVFEPFGIVELVQLPLD-ETGHCKGFGFVQFARLEDAKNALN-LNGQVEIAGRPIKV 398
Query: 397 SSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 456
S+VTD G QD+ + DFDDD+GGGLALNA+SRA+LMQKLDR+G A+SIAGSLG + A
Sbjct: 399 STVTDQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAAS 458
Query: 457 NGSAVNQQAI--SLPVVGQPAVPVPAVTAPVIPNM------------AAEFIGSPSECLL 502
G AV I + PV+ P+ + +AP P + + + IG PSECLL
Sbjct: 459 TGLAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGAIPSVDTIGVPSECLL 518
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
LKNMFDP++ET+PDFDL+I+ DV+ ECSK+G ++HIYVDK SAGFVYLRFE+T++A SAQ
Sbjct: 519 LKNMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQ 578
Query: 563 RAMHMRWFARRLISAIFMKPEDYEAKF 589
RA+H RWFA ++I+A FM P+ YE KF
Sbjct: 579 RALHGRWFAGKMITATFMVPQVYETKF 605
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 283/500 (56%), Positives = 350/500 (70%), Gaps = 30/500 (6%)
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
+R + ++E RE R +DR+ +R++ER +R R + + +S R S+
Sbjct: 67 NRGKEDREGNREERSSKDRDVDRDKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSD 126
Query: 172 REREL-ELERERERERELRERERDLEMRESRRYKEKK-EVVEPEADPERDQRTVFAYQMP 229
R+ + E R+ E +ERE R+ RRYK+KK E EPEADPERDQRTVFAYQ+
Sbjct: 127 RDDGIRERSRDNELREREKERESRERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQIS 186
Query: 230 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQ 289
LKATERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGY+EF D MSVPMAIALSGQLLL Q
Sbjct: 187 LKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQ 246
Query: 290 PVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGP 347
PVMVKPSEAEKN VQS + G A GPY R+LYVGNLH N+TE LR++F FG
Sbjct: 247 PVMVKPSEAEKNQVQSTSAAGGPGGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGT 306
Query: 348 VELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQD 407
VELVQ+P+D E+G CKGFGF+QF +LE A+ A S LNG+LEI GRT+KVS+VTD G QD
Sbjct: 307 VELVQMPVD-ESGHCKGFGFIQFTRLEDARNALS-LNGQLEIAGRTIKVSTVTDQPGLQD 364
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV-----------APAV 456
A + D D++DGGGL+LNA SRA LMQKLDRTG A+SIAGSLG AP +
Sbjct: 365 VGASTGDLDEEDGGGLSLNASSRASLMQKLDRTGAASSIAGSLGTHVVNNTGATMPAPIL 424
Query: 457 NGSAVNQQAISLPVVGQPAVP-------VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
G+ + ++ + PA P VP VTA ++ +G+PSECLLLKNMFDP
Sbjct: 425 GGATIPSLSVGTSLAAFPAFPGLGAGVQVPPVTANLLG------VGTPSECLLLKNMFDP 478
Query: 510 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
E++P FDL+I+ DVEEECS++G++KHIYVD+ SAGFVYLRFE +E+A AQRA++ RW
Sbjct: 479 TAESEPTFDLDIRDDVEEECSRFGKLKHIYVDRNSAGFVYLRFEKSESAMEAQRALNGRW 538
Query: 570 FARRLISAIFMKPEDYEAKF 589
FA ++I A FM YEAKF
Sbjct: 539 FAGKMIGATFMDIPSYEAKF 558
>gi|413934153|gb|AFW68704.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
gi|413934154|gb|AFW68705.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 536
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 319/602 (52%), Positives = 377/602 (62%), Gaps = 82/602 (13%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE S K +R R+RE E R K
Sbjct: 1 MEFDEYEYLEKAVEPAPPPANGSGSGEK---------DRGSRRREGDE-------GRISK 44
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR E DR+RGR R RDR++
Sbjct: 45 RSRSGE---------------------------DRERGRHRSVREHRDRDK--------- 68
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
D KE+ER RD + R R + R R R R R
Sbjct: 69 --------DDGKEKERSRDSRGKDRDREGREREKERGDRHRPREREVERERRSLSRSERR 120
Query: 181 ERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLKATE 234
E E +RE E + E E Y+++ EPE DPERDQRTVFA+Q+ LKA E
Sbjct: 121 RIEEEEMVRELEMERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLKADE 180
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK 294
RDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LLGQ VMVK
Sbjct: 181 RDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMVK 240
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
PSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 241 PSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP 296
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 414
LD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A + D
Sbjct: 297 LDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGVQASGATTGD 355
Query: 415 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA----PA--VNGSAVNQQAISL 468
DDD+GGGLALNA SRA LM KLDR+G ATS+ G +G A PA V G+A +S
Sbjct: 356 LDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLSP 415
Query: 469 PVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
V +VP APV+P A I S P+E LLLKNMFDP++ETDPDFDL+I+ DV++
Sbjct: 416 TVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQD 471
Query: 528 ECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 587
ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+H RWFA ++I+A FM ++Y
Sbjct: 472 ECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYST 531
Query: 588 KF 589
KF
Sbjct: 532 KF 533
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/334 (72%), Positives = 277/334 (82%), Gaps = 18/334 (5%)
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT-ATGPYGAIDRKL 324
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G GPYGA+DRKL
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKL 463
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVGNLHFNMTE+QLR++FEPFG VE+VQLPLD+ETG CKGFGF+QFA +EHAKAAQS LN
Sbjct: 464 YVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQS-LN 522
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
GKLEI GRT+KVSSV DH+G+QDT KSADFDDD+GG LALNAQSRALLMQKLDR+GI
Sbjct: 523 GKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGG-LALNAQSRALLMQKLDRSGITA 581
Query: 445 SIAGSL-GVAPAVNGSAVNQQAISLPV-----VGQPAVPVPAVTAP--VIPNMAAEFIGS 496
SI + G+APA Q AISLP+ + +P P + P ++P AE +G+
Sbjct: 582 SIGLPMNGLAPA-------QPAISLPIGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGT 634
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTE 556
PS CLLLKNMFDP ET+PDFDL+I+ DVEEECSKYGRVKHIYVDK SAGFVYL FE+ E
Sbjct: 635 PSNCLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGFVYLMFETVE 694
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
AA++AQRAMHMRWFAR++ISAI+M+P +YEAKFK
Sbjct: 695 AASAAQRAMHMRWFARKMISAIYMQPHEYEAKFK 728
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
EMR+SRR++EKKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM
Sbjct: 189 FEMRDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 248
Query: 255 DRNSRRSKGVG 265
DRNSRRSKGVG
Sbjct: 249 DRNSRRSKGVG 259
>gi|194704666|gb|ACF86417.1| unknown [Zea mays]
gi|414871304|tpg|DAA49861.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 537
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 318/603 (52%), Positives = 375/603 (62%), Gaps = 83/603 (13%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE Q S S +K +R R+RE E
Sbjct: 1 MEFDEYEYLEKAVEPAPPQANGSGSGSGEK-------DRGSRRREGGE------------ 41
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
DR +R R DRDRDR
Sbjct: 42 --------------------DRISKRSRSGEDRDRDR----------------------- 58
Query: 121 ERERRERRDREKE---RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
R RE RDR+K+ ER R+ + R R + R R R R R
Sbjct: 59 HRSGREHRDRDKDDVKEERSRESRGKDRDREGREREKERGDRHRLREREVERERRSRSRS 118
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLK 231
R E E +RE ER+ E E Y+++ EPE DPERDQRTVFA+Q+ LK
Sbjct: 119 ERRRAEEEEMVRELERERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLK 178
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPV 291
A ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LLGQ V
Sbjct: 179 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAV 238
Query: 292 MVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELV 351
MVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELV
Sbjct: 239 MVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELV 294
Query: 352 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK 411
QLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A
Sbjct: 295 QLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGMQASGAT 353
Query: 412 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GSLGVA-PAVNGSAVNQQAIS 467
+ D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+ GVA PA + A
Sbjct: 354 TGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPATSVIGAPGAASL 413
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 526
LP VP APV+P + +P+E LLLKNMFDPA+ETDPDFDL+I+ DV+
Sbjct: 414 LPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQ 471
Query: 527 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
+ECSK+G VKHI+VDK +AGFVYL+F+S AAA AQ A+H RWFA ++I+A FM +Y
Sbjct: 472 DECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYS 531
Query: 587 AKF 589
KF
Sbjct: 532 TKF 534
>gi|224034337|gb|ACN36244.1| unknown [Zea mays]
Length = 410
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 272/423 (64%), Positives = 321/423 (75%), Gaps = 25/423 (5%)
Query: 174 RELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKAT 233
RELE+ERER R+R+ + EPE DPERDQRTVFA+Q+ LKA
Sbjct: 3 RELEMERERSERHHYRDRDVRRRKDDG---------AEPEVDPERDQRTVFAFQLSLKAD 53
Query: 234 ERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMV 293
ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LLGQ VMV
Sbjct: 54 ERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAVMV 113
Query: 294 KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
KPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQL
Sbjct: 114 KPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQL 169
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA 413
PLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A +
Sbjct: 170 PLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGVQASGATTG 228
Query: 414 DFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA----PA--VNGSAVNQQAIS 467
D DDD+GGGLALNA SRA LM KLDR+G ATS+ G +G A PA V G+A +S
Sbjct: 229 DLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGAAGVAVPATSVIGAAGAASLLS 288
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKNMFDPAMETDPDFDLEIQGDVE 526
V +VP APV+P A I S P+E LLLKNMFDP++ETDPDFDL+I+ DV+
Sbjct: 289 PTVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKNMFDPSLETDPDFDLDIRDDVQ 344
Query: 527 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
+ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+H RWFA ++I+A FM ++Y
Sbjct: 345 DECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQALHGRWFAGKMITATFMSDQEYS 404
Query: 587 AKF 589
KF
Sbjct: 405 TKF 407
>gi|242039571|ref|XP_002467180.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
gi|241921034|gb|EER94178.1| hypothetical protein SORBIDRAFT_01g021020 [Sorghum bicolor]
Length = 535
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/398 (65%), Positives = 306/398 (76%), Gaps = 30/398 (7%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K + EPE DPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 151 KDDGAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 210
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
YIEFYDVMSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLY
Sbjct: 211 YIEFYDVMSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLY 266
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGNLH N+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG
Sbjct: 267 VGNLHSNITEDQLRQVFEPFGQVELVQLPLDPMTGLCKGYGFIQFARLEDAKAAQS-LNG 325
Query: 386 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 445
+L+I GR +KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS
Sbjct: 326 QLDIAGRVIKVSAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATS 385
Query: 446 IAGSLGVAPAVNGSAVNQQAISLP---VVGQPAV-----PVPAVT-----APVIPNMAAE 492
+ G +G A +SLP V+G P P A APV+P
Sbjct: 386 LTGGIGAA-----------GVSLPATSVIGAPGAASLLSPTVAAVGSVPGAPVLPVTTQN 434
Query: 493 FIGS-PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLR 551
I S P+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+
Sbjct: 435 VIMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQ 494
Query: 552 FESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
F+S AA AQ+A+H RWFA ++I+A FM ++Y KF
Sbjct: 495 FDSVAAAGKAQQALHGRWFAGKMITATFMSAQEYSTKF 532
>gi|357113992|ref|XP_003558785.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 551
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/398 (66%), Positives = 314/398 (78%), Gaps = 23/398 (5%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K++ EPEADPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 165 KEDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 224
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS+ ++ A+G GA RKLY
Sbjct: 225 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSSATSSVAASG--GA--RKLY 280
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGNLH N+TE QLR++FEPFG VELVQLP+D TG CKGFGFVQFA+LE AKAAQS LNG
Sbjct: 281 VGNLHANITEDQLRQVFEPFGLVELVQLPVDPLTGLCKGFGFVQFARLEDAKAAQS-LNG 339
Query: 386 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 445
+L+I GR +KVS+VTD G Q + A + D DDD+GGGLALNA SRALLMQKLDR+G+ TS
Sbjct: 340 QLDIAGRVIKVSAVTDQAGVQVSGATTGDLDDDEGGGLALNASSRALLMQKLDRSGVTTS 399
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVG--------QPAVP----VPAVTAPVIPNMAAEF 493
+ +G A +N ++V A+S V+G QP + +P + PVI A
Sbjct: 400 LTSGMGAA-GLN-TSVTLPAVS--VLGAPPAAPALQPTLTGLGLIPGASVPVISQPIAT- 454
Query: 494 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFE 553
PSECLLLKNMFDPA+ETDPDFDL+I+ DV EECSK+G+++HI+VDK +AGFVYLRF+
Sbjct: 455 -APPSECLLLKNMFDPAVETDPDFDLDIKDDVREECSKFGQIRHIFVDKNTAGFVYLRFD 513
Query: 554 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
S AA AQ+A+ RWFA ++I+A FM P+ YEAKF S
Sbjct: 514 SITAAMGAQKALQGRWFAGKMITATFMSPQQYEAKFPS 551
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 276/368 (75%), Gaps = 51/368 (13%)
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT-ATGPYGAIDRKL 324
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT+ G GPYGA+DRKL
Sbjct: 404 YIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTTGAAGVVGPYGAVDRKL 463
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVGNLHFNMTE+QLR++FEPFG VE+VQLPLD+ETG CKGFGF+QFA +EHAKAAQS LN
Sbjct: 464 YVGNLHFNMTESQLREIFEPFGTVEVVQLPLDLETGHCKGFGFIQFAHIEHAKAAQS-LN 522
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG----------------------- 421
GKLEI GRT+KVSSV DH+G+QDT KSADFDDD+GG
Sbjct: 523 GKLEIAGRTIKVSSVADHIGSQDTTTKSADFDDDEGGLSETSIFAPTISLSQFFPSYEFL 582
Query: 422 -----------GLALNAQSRALLMQKLDRTGIATSIAGSL-GVAPAVNGSAVNQQAISLP 469
ALNAQSRALLMQKLDR+GI SI + G+APA Q AISLP
Sbjct: 583 AHLLCLFVTFMQQALNAQSRALLMQKLDRSGITASIGLPMNGLAPA-------QPAISLP 635
Query: 470 V-----VGQPAVPVPAVTAP--VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
+ + +P P + P ++P AE +G+PS CLLLKNMFDP ET+PDFDL+I+
Sbjct: 636 IGNTGLIHPGLIPAPGLALPTQIMPTQVAEPVGTPSNCLLLKNMFDPTTETEPDFDLDIK 695
Query: 523 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DVEEECSKYGRVKHIYVDK SAGFVYL FE+ EAA++AQRAMHMRWFAR++ISAI+M+P
Sbjct: 696 EDVEEECSKYGRVKHIYVDKNSAGFVYLMFETVEAASAAQRAMHMRWFARKMISAIYMQP 755
Query: 583 EDYEAKFK 590
+YEAKFK
Sbjct: 756 HEYEAKFK 763
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/71 (92%), Positives = 69/71 (97%)
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
EMR+SRR++EKKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM
Sbjct: 189 FEMRDSRRFREKKETVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 248
Query: 255 DRNSRRSKGVG 265
DRNSRRSKGVG
Sbjct: 249 DRNSRRSKGVG 259
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 310/603 (51%), Positives = 381/603 (63%), Gaps = 63/603 (10%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 -RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVY
Sbjct: 148 PKERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVY 199
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEA 298
EFFS+AGKVRDVR+IMDR SRRS+G+GY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEA
Sbjct: 200 EFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEA 259
Query: 299 EKNLVQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
EKNLVQS T+A G GPY R+LYVGNLH NM+E LRK+FE FG VELVQ+P D
Sbjct: 260 EKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD 319
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAA 410
ETG CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T
Sbjct: 320 -ETGLCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGD 377
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 470
D +LNAQSRALLMQKLDR+G A+S L A + NG +++ P
Sbjct: 378 LDDDDGGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPA 431
Query: 471 VGQPAVP-VPAVTAPVIPN-MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 526
+ Q + P V + +IP + A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+
Sbjct: 432 LVQGSFPAVAGLAGGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVK 491
Query: 527 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
EECSK+G++ HI+VDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YE
Sbjct: 492 EECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYE 551
Query: 587 AKF 589
AKF
Sbjct: 552 AKF 554
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 266/405 (65%), Positives = 310/405 (76%), Gaps = 33/405 (8%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E EPEADPERDQRTVFAYQ+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 177 KEEAGEPEADPERDQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 236
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
YIEFYDVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKLY
Sbjct: 237 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKLY 292
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ--FAQLEHAKAAQSAL 383
VGNLH N+TE QLR++FEPFG VELVQLPLD TG CKGFGFVQ FA+LE AKAAQS L
Sbjct: 293 VGNLHSNITEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQASFARLEDAKAAQS-L 351
Query: 384 NGKLEIVGRTLK--VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 441
NG+L+I GR +K VS+VTD G Q + + D DDD+GGGLALNA SRALLMQKLDR+G
Sbjct: 352 NGQLDIAGRVIKASVSAVTDQAGVQVSGVTTGDLDDDEGGGLALNASSRALLMQKLDRSG 411
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLP---VVGQPAVPVPAVTAPVIPNMA-------- 490
+ TS+ G+A G+ +N ++ LP V+G P PV A P +P +
Sbjct: 412 VTTSLTA--GIA----GTGLN-TSVGLPPASVLGAP--PVAASVLPTVPGLGSVPGVSLP 462
Query: 491 ----AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAG 546
A PSECLLLKNMFDP++ETDPDFDL+I+ DV+EECSK+G+VKHI+VDK ++G
Sbjct: 463 ITTQAIETAPPSECLLLKNMFDPSVETDPDFDLDIKDDVQEECSKFGQVKHIFVDKNTSG 522
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
FVYLRF+S AA SAQ+A+H RWFA ++I+A FM P+ Y KF S
Sbjct: 523 FVYLRFDSITAAMSAQKALHGRWFAGKMITATFMSPQQYSTKFPS 567
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 311/604 (51%), Positives = 381/604 (63%), Gaps = 64/604 (10%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 -RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVY
Sbjct: 148 PKERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVY 199
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEA 298
EFFS+AGKVRDVR+IMDR SRRS+G+GY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEA
Sbjct: 200 EFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEA 259
Query: 299 EKNLVQSNTSAGGTAT--GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
EKNLVQS T+A G GPY R+LYVGNLH NM+E LRK+FE FG VELVQ+P D
Sbjct: 260 EKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD 319
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAA 410
ETG CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T
Sbjct: 320 -ETGLCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGD 377
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 470
D +LNAQSRALLMQKLDR+G A+S L A + NG +++ P
Sbjct: 378 LDDDDGGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPA 431
Query: 471 VGQPAVPVPAVTA--PVIPN-MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 525
+ Q + P A A +IP + A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV
Sbjct: 432 LVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDV 491
Query: 526 EEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 585
+EECSK+G++ HI+VDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E Y
Sbjct: 492 KEECSKFGKLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAY 551
Query: 586 EAKF 589
EAKF
Sbjct: 552 EAKF 555
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/391 (66%), Positives = 308/391 (78%), Gaps = 13/391 (3%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K + EPEADPERDQRTVFA+Q+ LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVG
Sbjct: 162 KDDGAEPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 221
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
YIEFYD MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLY
Sbjct: 222 YIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASG--GA--RKLY 277
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGNLH N+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG
Sbjct: 278 VGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNG 336
Query: 386 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 445
+L+I GR +KVS+VT+ G Q A + D DDD+GGGLALNA SRA+LM+KLDR+G ATS
Sbjct: 337 QLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATS 396
Query: 446 IAGSLGVAPAVNGS----AVNQQAISLPVVG--QPAVP-VPAVTAPVIPNMAAEFIGSPS 498
I G +G+ P VN S + + LP QP +P + V IP + IGSP+
Sbjct: 397 ITGGIGI-PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQIPGTQSADIGSPT 455
Query: 499 ECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAA 558
E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK +AGFVYL F+S AA
Sbjct: 456 EFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAA 515
Query: 559 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+AQRA+H RWFA ++I+A FM + Y+ KF
Sbjct: 516 TAAQRALHGRWFAGKMITATFMTAQQYKMKF 546
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 315/648 (48%), Positives = 387/648 (59%), Gaps = 103/648 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 RERERERELRERERD--------------------------------------------L 195
+ERE ++R+RD +
Sbjct: 148 ---PKERETKDRDRDRRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCV 204
Query: 196 EMRESRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
+R+K+KKE VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IM
Sbjct: 205 YAYWRKRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIM 264
Query: 255 DRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA- 313
DR SRRS+G+GY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G
Sbjct: 265 DRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGG 324
Query: 314 -TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
GPY R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+
Sbjct: 325 MLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFAR 383
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALN 426
LE A+ A + LNG+LEI GR +KVS+VTD TQ T D +LN
Sbjct: 384 LEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLN 438
Query: 427 AQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--P 484
AQSRALLMQKLDR+G A+S L A + NG +++ P + Q + P A A
Sbjct: 439 AQSRALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSG 496
Query: 485 VIPN-MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVD 541
+IP + A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VD
Sbjct: 497 IIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVD 556
Query: 542 KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
K S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 557 KNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 604
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 317/637 (49%), Positives = 388/637 (60%), Gaps = 92/637 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKS-ERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVE + + + +K K E K RS R R D
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGKERSRSSRHRGD------------- 47
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKE 119
K+ RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 48 KKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEE----RNGK 103
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 104 DRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIE 147
Query: 180 RERERERELRERERD---------------------LEMRESR---RYKEKKE-VVEPEA 214
+ERE ++R+RD L R+ R+K+KKE VEPEA
Sbjct: 148 ---PKERETKDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEA 204
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKV---------RDVRLIMDRNSRRSKGVG 265
DPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKV RDVR+IMDR SRRS+G+G
Sbjct: 205 DPERDQRTVFAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIG 264
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA--TGPYGAIDRK 323
Y+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GPY R+
Sbjct: 265 YVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARR 324
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+LE A+ A + L
Sbjct: 325 LYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDARNALN-L 382
Query: 384 NGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
NG+LEI GR +KVS+VTD TQ T D +LNAQSRALLMQKL
Sbjct: 383 NGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLNAQSRALLMQKL 438
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP--VIPN-MAAEF- 493
DR+G A+S L A + NG +++ P + Q + P A A +IP + A F
Sbjct: 439 DRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFD 496
Query: 494 -IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRF 552
IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VDK S GFVYLRF
Sbjct: 497 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRF 556
Query: 553 ESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
E+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 557 ENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 593
>gi|302790311|ref|XP_002976923.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
gi|302797811|ref|XP_002980666.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300151672|gb|EFJ18317.1| hypothetical protein SELMODRAFT_178258 [Selaginella moellendorffii]
gi|300155401|gb|EFJ22033.1| hypothetical protein SELMODRAFT_151471 [Selaginella moellendorffii]
Length = 532
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 288/593 (48%), Positives = 361/593 (60%), Gaps = 71/593 (11%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE S+ + + +E++ + + RS K
Sbjct: 1 MDFDEYEYLEKTVE-----------SAAAAGATAGANGEGAKAVAAAEDDGHKSEHRSSK 49
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR DE+ RDRD+G DRE+ R +
Sbjct: 50 RSRGDEE-------------------------RDRDKG---------DREKRSRREHRSS 75
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER + RDR + ++E+ R R + S R + R R+ E+E E +
Sbjct: 76 RYEREKDRDRGRGDDKEKSERDRDRDRDKERSRSRRDDRDKDSRRHSRDKEKE-ERASSK 134
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
+RE++++ R+ RE R KE+ E E DPERDQRTVFA+Q+ LKA E+ VY+F
Sbjct: 135 DREKDKDFRKS------RERRDRKEESAPAESEPDPERDQRTVFAWQICLKADEKHVYDF 188
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVP+A+ L+ Q LLGQ VMVKPSEAEK
Sbjct: 189 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPLALQLNNQPLLGQNVMVKPSEAEK 248
Query: 301 NLVQSNTSAGGTA--TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
NLV S + GPY R+LYVGNLH N+TE QLR++FEPFG +ELVQLPLD E
Sbjct: 249 NLVHSASGGSAAGAFNGPYSGGARRLYVGNLHVNITEDQLRQVFEPFGVIELVQLPLDQE 308
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 418
TG CKG+GFVQ+++LE A+AAQ LNG LE+ GR +KVS+VTD QD D DDD
Sbjct: 309 TGLCKGYGFVQYSKLEDARAAQQGLNGILELAGRAIKVSAVTDQQTGQDIGTTQNDLDDD 368
Query: 419 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV-APAVNGSAVNQQAISL-PVVGQPAV 476
+GGGLALNA+SRALLMQKLDR+G GV APA S Q +++ PV G
Sbjct: 369 EGGGLALNARSRALLMQKLDRSG---------GVGAPA---SLQPQAPMAVPPVYGGIGS 416
Query: 477 PVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVK 536
+ V+P E IG PSECLLLKNMFDPA ETDP+FD++I+ DV++ECSK+G VK
Sbjct: 417 ALSMQNGSVLPE---EPIGPPSECLLLKNMFDPATETDPEFDIDIKNDVQDECSKFGPVK 473
Query: 537 HIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
HI VDK S G VY+RF + A +AQ ++ RWFA + I A FM + YE KF
Sbjct: 474 HISVDKYSQGHVYVRFGTAIDALAAQLNLNKRWFAGKTIRATFMNVQVYEEKF 526
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 302/600 (50%), Positives = 378/600 (63%), Gaps = 60/600 (10%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + + + +K K E + + E++E
Sbjct: 1 MDFDEYEYLEKTVENPHLENEVGNGGGDEKVKSEGRERSRSSRHRGDEKKE--------- 51
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RDEDE+ + RDR R R+R+RE + D+E R +
Sbjct: 52 ---RDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDIDKEE----RNGKD 104
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE- 179
R++ K R+ E+D RRS SRS R SQ ERE+ LE+E
Sbjct: 105 RERDRDKDRDGKGRDHEKDRSRRSRSRSERHRSQ----------------EREKSLEIEP 148
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
+ERE + R+R R + +E + VEPEADPERDQRTVFAYQ+ L+ATERDVYE
Sbjct: 149 KERETKDRDRDRRRHKDKKEDK--------VEPEADPERDQRTVFAYQIALRATERDVYE 200
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 299
FFS+AGKVRDVR+IMDR SRRS+G+GY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAE
Sbjct: 201 FFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAE 260
Query: 300 KNLVQSNTSAGGTA--TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 357
KNLVQS T+A G GPY R+LYVGNLH NM+E LRK+FEPFG VELVQ+P D
Sbjct: 261 KNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRD- 319
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAK 411
ETG CKGFGFVQFA+LE A+ A + LNG+LEI GR +KVS+VTD TQ T
Sbjct: 320 ETGLCKGFGFVQFARLEDARNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDL 378
Query: 412 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 471
D +LNAQSRALLMQKLDR+G A+S L A +++G +++ P +
Sbjct: 379 DDDDGGGL----SLNAQSRALLMQKLDRSGTASSTG--LTTAASIHGGVSTISSLAAPAL 432
Query: 472 GQPAVPVPA--VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
Q + P A A +IP + + +G PSECLLLKNMFDP+ +T+ DFD +I+ DV+EEC
Sbjct: 433 VQGSFPAVAGLAGAGIIPGV-IDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEEC 491
Query: 530 SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
SK+G + HIYVDK S GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M YEAKF
Sbjct: 492 SKFGNLNHIYVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTVAYEAKF 551
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 322/596 (54%), Positives = 395/596 (66%), Gaps = 56/596 (9%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEKTVE + S + ++++ R ++EE R K
Sbjct: 1 MEFDEYEYLEKTVEPS--------APSTNGSGEKDRAGSRRRSSGGGRDDEE----RGSK 48
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
RSR S DRDRDRDR + RDRD G+E+ER + RSR ++ EK
Sbjct: 49 RSR--------SGEDRDRDRDRHRGGGGGREHRDRDDGKEKERSS-----RSR-VKDGEK 94
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
+R + +DR KE E++R +R S R + R S R E R E E+ R
Sbjct: 95 DRGKDGEKDRSKEAEKDRSRDRDRDRDSERDRRRERDSGRERRSSSRPERRRTEEEEMVR 154
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E ++ERE +R RD R+ RR K+ EPEADPERDQRTVFA+Q+ LKA ERDVYEF
Sbjct: 155 ELQKERERSDRNRDYRDRDVRRRKDDG--AEPEADPERDQRTVFAFQLSLKADERDVYEF 212
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
FS+AGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIAL+GQ+LLGQ VMVKPSEAEK
Sbjct: 213 FSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEK 272
Query: 301 NLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETG 360
NLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP
Sbjct: 273 NLVQSNVASGGIASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP------ 322
Query: 361 QCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG 420
FA+LE AKAAQS LNG+L+I GR +KVS+VT+ G Q A + D DDD+G
Sbjct: 323 ---------FARLEDAKAAQS-LNGQLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEG 372
Query: 421 GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS----AVNQQAISLPVVG--QP 474
GGLALNA SRA+LM+KLDR+G ATSI G +G+ P VN S + + LP QP
Sbjct: 373 GGLALNASSRAMLMRKLDRSGTATSITGGIGI-PGVNTSVELPSASVTGAPLPTTSLIQP 431
Query: 475 AVP-VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYG 533
+P + V IP + IGSP+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G
Sbjct: 432 TIPAIGTVPGIQIPGTQSADIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFG 491
Query: 534 RVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
V HI+VDK +AGFVYL F+S AA +AQRA+H RWFA ++I+A FM + Y+ KF
Sbjct: 492 AVNHIFVDKNTAGFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKF 547
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/404 (62%), Positives = 298/404 (73%), Gaps = 22/404 (5%)
Query: 200 SRRYKEKKE-VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNS 258
RR+K+KKE VEPEADPERDQRTVFAYQ+ L+ATERDVYEFFS+AGKVRDVR+IMDR S
Sbjct: 19 CRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRIS 78
Query: 259 RRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA--TGP 316
RRS+G+GY+EFYD MSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS T+A G GP
Sbjct: 79 RRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGP 138
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
Y R+LYVGNLH NM+E LRK+FE FG VELVQ+P D ETG CKGFGFVQFA+LE A
Sbjct: 139 YSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRD-ETGLCKGFGFVQFARLEDA 197
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHV------GTQDTAAKSADFDDDDGGGLALNAQSR 430
+ A + LNG+LEI GR +KVS+VTD TQ T D +LNAQSR
Sbjct: 198 RNALN-LNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGL----SLNAQSR 252
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPN 488
ALLMQKLDR+G A+S L A + NG +++ P + Q + P A A +IP
Sbjct: 253 ALLMQKLDRSGTASSTG--LTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPG 310
Query: 489 -MAAEF--IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA 545
+ A F IG PSECLLLKNMFDP+ ET+ DFD +I+ DV+EECSK+G++ HI+VDK S
Sbjct: 311 VIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSV 370
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
GFVYLRFE+ +AA AQRA+H RWFA ++I+A +M E YEAKF
Sbjct: 371 GFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKF 414
>gi|62320860|dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 308
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/320 (73%), Positives = 266/320 (83%), Gaps = 13/320 (4%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN-TSAGGTATGPYGAIDRKLYVGNLHF 331
MSVPMAIALSGQL LGQPVMVKPSEAEKNL QSN T+ GGT G DRKLYVGNLHF
Sbjct: 1 MSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTVGGT-----GPADRKLYVGNLHF 55
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
NM+E QLR++FE FGPVELVQLPLD ETGQCKGFGF+QF QLEH+KAAQ ALNGKLEI G
Sbjct: 56 NMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGFIQFVQLEHSKAAQIALNGKLEIAG 115
Query: 392 RTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG 451
RT+KVSSV+DH+GTQD+A KSADFDDDDGGGLALNAQSRA+LMQKLDR+GIATSI GSLG
Sbjct: 116 RTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNAQSRAMLMQKLDRSGIATSIVGSLG 175
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
V P +NG+A NQ ++ P+ P + IP+ E +G PSECLLLKNMFDPA
Sbjct: 176 V-PGLNGAAFNQPGMN------PSFPTSVLPTTAIPSFVNEHVGLPSECLLLKNMFDPAT 228
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 571
ET+P+FDLEI+ DV +ECSKYG V HIYVDK SAGFVYLRF+S EAAA+AQRAMHMRWFA
Sbjct: 229 ETEPNFDLEIRDDVADECSKYGPVNHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFA 288
Query: 572 RRLISAIFMKPEDYEAKFKS 591
+++ISA FM P +YEAK K+
Sbjct: 289 QKMISATFMPPHEYEAKAKA 308
>gi|414871305|tpg|DAA49862.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 487
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 292/556 (52%), Positives = 341/556 (61%), Gaps = 83/556 (14%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
MEFDEYEYLEK VE Q S S +K +R R+RE E
Sbjct: 1 MEFDEYEYLEKAVEPAPPQANGSGSGSGEK-------DRGSRRREGGE------------ 41
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
DR +R R DRDRDR
Sbjct: 42 --------------------DRISKRSRSGEDRDRDR----------------------- 58
Query: 121 ERERRERRDREKE---RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
R RE RDR+K+ ER R+ + R R + R R R R R
Sbjct: 59 HRSGREHRDRDKDDVKEERSRESRGKDRDREGREREKERGDRHRLREREVERERRSRSRS 118
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEV------VEPEADPERDQRTVFAYQMPLK 231
R E E +RE ER+ E E Y+++ EPE DPERDQRTVFA+Q+ LK
Sbjct: 119 ERRRAEEEEMVRELERERERSERHHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSLK 178
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPV 291
A ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LLGQ V
Sbjct: 179 ADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQAV 238
Query: 292 MVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELV 351
MVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N+TE QLR++FEPFG VELV
Sbjct: 239 MVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELV 294
Query: 352 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK 411
QLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR +KVS+VTDHVG Q + A
Sbjct: 295 QLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGRVIKVSAVTDHVGMQASGAT 353
Query: 412 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GSLGVA-PAVNGSAVNQQAIS 467
+ D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+ GVA PA + A
Sbjct: 354 TGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGAAGVAVPATSVIGAPGAASL 413
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 526
LP VP APV+P + +P+E LLLKNMFDPA+ETDPDFDL+I+ DV+
Sbjct: 414 LPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMFDPALETDPDFDLDIRDDVQ 471
Query: 527 EECSKYGRVKHIYVDK 542
+ECSK+G VKHI+VDK
Sbjct: 472 DECSKFGAVKHIFVDK 487
>gi|224080644|ref|XP_002306193.1| predicted protein [Populus trichocarpa]
gi|222849157|gb|EEE86704.1| predicted protein [Populus trichocarpa]
Length = 348
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/350 (66%), Positives = 271/350 (77%), Gaps = 20/350 (5%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA-GGT 312
MDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS T+ G
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTTAVTSGG 60
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
TGPY R+LYVGNLHFN+TE QLR++FEPFG VELVQLP D E+G CKGFGFVQFA+
Sbjct: 61 LTGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPHD-ESGHCKGFGFVQFAR 119
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRAL 432
LE A+ A + LNG++EI GR +KVS+VTD GTQD DFDDD+GGGLALNA+SRAL
Sbjct: 120 LEDARNALN-LNGQVEIAGRPIKVSAVTDQTGTQDGGTNVGDFDDDEGGGLALNARSRAL 178
Query: 433 LMQKLDRTGIATSIAGSLGV-----APAVNGSAVNQQAI------SLPVVGQPAVPVPAV 481
LMQKLDRTG A+SIAGSLG AP + + V A+ S+P + P +PVP +
Sbjct: 179 LMQKLDRTGTASSIAGSLGTPTLPTAPILGATPVVSPAVAPLLSGSVPAI--PGLPVPGL 236
Query: 482 TAPV--IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 539
P IP M + IG PS+CL LKNMFDP ET+PDFDL+I+ DV+EECS++G VKHIY
Sbjct: 237 QLPATAIPTM--DTIGVPSDCLFLKNMFDPKTETEPDFDLDIKEDVQEECSRFGNVKHIY 294
Query: 540 VDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VDK SAGFVY+RFE+ +AA +AQ A+H RWFA +LI+A FM P+ YEAKF
Sbjct: 295 VDKNSAGFVYMRFENMQAAINAQHALHGRWFAGKLITATFMVPQTYEAKF 344
>gi|168061001|ref|XP_001782480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666033|gb|EDQ52699.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/362 (59%), Positives = 258/362 (71%), Gaps = 29/362 (8%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLL QPVMVKPSEAEKNLVQS T+ G
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTAVPGVT 60
Query: 314 ---TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GPY R+LYVGNLHFNMTE QLR++FEPFGPVELVQLP DIETGQ KG+GFVQ+
Sbjct: 61 GGFIGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQY 120
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
A+LE A+AAQ LNG LE+ GR +KVS+V+D +G +D + DDD+GGGL+LNA+SR
Sbjct: 121 ARLEDARAAQQNLNG-LELAGRPIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSR 179
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAV-PVPAVTAPVI--- 486
ALLMQKLDR+G TS G+ PA A+ ++P P V P V P++
Sbjct: 180 ALLMQKLDRSGSGTSNTGA--TLPAAPVPALGLLGTAVPTGVTPLVRPPFFVQNPLVLAG 237
Query: 487 ------------PNM-------AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P + A + IG PSE LLLKNMFDP+ E+DP+FDL+I+ DV++
Sbjct: 238 AATGLGAAALGTPGLVMPPVVGAVDAIGQPSEYLLLKNMFDPSTESDPEFDLDIKEDVQD 297
Query: 528 ECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 587
ECSK+G VKHI+VDK SAG VYL FEST AA +AQRA+H RWFA ++I+A +M Y+
Sbjct: 298 ECSKFGAVKHIFVDKNSAGHVYLCFESTPAAMAAQRALHGRWFAGKMITATYMSALAYQT 357
Query: 588 KF 589
KF
Sbjct: 358 KF 359
>gi|217074842|gb|ACJ85781.1| unknown [Medicago truncatula]
Length = 346
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/350 (63%), Positives = 265/350 (75%), Gaps = 22/350 (6%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ LLGQPVMVKPSEAEKNLVQS S
Sbjct: 1 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTASVVNGP 60
Query: 314 TG---PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
+G PY R+LYVGNLH ++TE LR++FE FG VELVQ+PLD + G CKGFGFVQF
Sbjct: 61 SGNLGPYSGGARRLYVGNLHSSITEADLRRVFEAFGQVELVQMPLD-DIGHCKGFGFVQF 119
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
A+LE AK AQS LN +LEI GRT+KVS+VTD G Q+ + D DDD+GGGL+LNA SR
Sbjct: 120 ARLEDAKNAQS-LNSQLEIGGRTIKVSAVTDQSGMQEFGGNTGDIDDDEGGGLSLNASSR 178
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA---------ISLPVVGQPA--VPVP 479
ALLMQKLDR+GIA+S+ G LG + VN + +N QA I P VG P + +P
Sbjct: 179 ALLMQKLDRSGIASSMVGLLGNS-VVNNTGLNLQAMGSIPAVALIPAPGVGMPGGGLQIP 237
Query: 480 AVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 539
+T+P I + IG+PSECLLLKNMFDP E +PDFDL+++ DVE ECSK+G +KHIY
Sbjct: 238 MLTSPTI-----DTIGTPSECLLLKNMFDPEDEKEPDFDLDVKEDVEAECSKFGNLKHIY 292
Query: 540 VDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VDKRSAGFVYLRFE+T+ A SAQRA+H RWFA ++I+A FM P+ YE +F
Sbjct: 293 VDKRSAGFVYLRFENTQPAISAQRALHGRWFAGKMITASFMVPQLYEDRF 342
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/429 (55%), Positives = 280/429 (65%), Gaps = 85/429 (19%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERD----------------------------- 236
K+EV EPE DPERDQRTVFA+Q+ LKA ERD
Sbjct: 155 KEEVAEPEVDPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVG 214
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 296
YIEFYD MSVPMAIALSGQLLLGQ VMVKPS
Sbjct: 215 -----------------------------YIEFYDAMSVPMAIALSGQLLLGQQVMVKPS 245
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
EAEKNLVQSN S+ G A+ RKLYVGNLH N+ E QLR++FEPFG VELVQLPLD
Sbjct: 246 EAEKNLVQSNASSSGAAS----GGARKLYVGNLHSNINEDQLRQVFEPFGQVELVQLPLD 301
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD 416
TG CKGFGFVQF +LE AKAAQS LNG+LEI GR +KVS+VTD G Q + A + D D
Sbjct: 302 PLTGLCKGFGFVQFVRLEDAKAAQS-LNGQLEIAGRVIKVSAVTDQAGVQVSGA-TGDLD 359
Query: 417 DDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG---- 472
DD+GGGLALNA SRALLMQKLDR+GI TS+ G +G A G + ++ V+G
Sbjct: 360 DDEGGGLALNASSRALLMQKLDRSGITTSLTGGMGTA----GLSTPVVIPTVSVLGAAPA 415
Query: 473 -----QPAVP----VPAVTAPV-IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
P VP +P T P+ P++ + PSECLLLKNMFDPA+ETDPDFDL+I+
Sbjct: 416 AAPLLHPTVPGLGSIPGATLPITTPSID---LAPPSECLLLKNMFDPALETDPDFDLDIR 472
Query: 523 GDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV+EECSK+G++KHI+VDK +AGFVYLRF+S AA SAQ+A+H RWFA ++I+A FM P
Sbjct: 473 DDVQEECSKFGQLKHIFVDKNTAGFVYLRFDSITAAMSAQKALHGRWFAGKMITATFMTP 532
Query: 583 EDYEAKFKS 591
+ YE KF S
Sbjct: 533 QQYEMKFPS 541
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/359 (60%), Positives = 260/359 (72%), Gaps = 37/359 (10%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLL QPVMVKPSEAEKNLVQS T G A
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLNQPVMVKPSEAEKNLVQSTTVVPGVA 60
Query: 314 ---TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GPY R+LYVGNLHFNMTE QLR++FEPFGPVELVQLP DIETGQ KG+GFVQ+
Sbjct: 61 GSFIGPYSGGARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQY 120
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
A+LE A+AAQ LNG LE+ GR +KVS+V+D +G +D + DDD+GGGL+LNA+SR
Sbjct: 121 ARLEDARAAQQNLNG-LELAGRPIKVSAVSDQIGMEDMGVHPGELDDDEGGGLSLNARSR 179
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPA----VNGSAVNQQAISLPVVGQPAVPVPAVTAPVI 486
ALLMQKLDR+G TS+A +L APA + G+AV P V A P V P++
Sbjct: 180 ALLMQKLDRSGTGTSVASTLPAAPAPTLGLLGTAVP------PTVTPLARPPFFVQNPLV 233
Query: 487 ---------------------PNM--AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
P++ A + IG PSE LLLKNMFDP+ E+DPDFD++I+
Sbjct: 234 LAGAAPGLGAAAALSSPALAMPSLTGAVDAIGQPSEYLLLKNMFDPSTESDPDFDMDIKD 293
Query: 524 DVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV+EECSK+G VKHI+VDK SAG VYL F+S AA +AQRA+H RWFA ++I+A ++KP
Sbjct: 294 DVQEECSKFGVVKHIFVDKNSAGHVYLCFDSIAAAMAAQRALHGRWFAGKMITATYLKP 352
>gi|78708720|gb|ABB47695.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215765085|dbj|BAG86782.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 339
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/346 (63%), Positives = 266/346 (76%), Gaps = 19/346 (5%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MDRNSRRSKGVGYIEFYD MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A
Sbjct: 1 MDRNSRRSKGVGYIEFYDAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIA 60
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
+G GA RKLYVGNLH N+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+L
Sbjct: 61 SG--GA--RKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARL 116
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALL 433
E AKAAQS LNG+L+I GR +KVS+VT+ G Q A + D DDD+GGGLALNA SRA+L
Sbjct: 117 EDAKAAQS-LNGQLDIAGRVIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAML 175
Query: 434 MQKLDRTGIATSIAGSLGVAPAVNGS----AVNQQAISLPVVG--QPAVP----VPAVTA 483
M+KLDR+G ATSI G +G+ P VN S + + LP QP +P VP +
Sbjct: 176 MRKLDRSGTATSITGGIGI-PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQ- 233
Query: 484 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR 543
IP + IGSP+E LLLKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK
Sbjct: 234 --IPGTQSADIGSPTEFLLLKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKN 291
Query: 544 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+AGFVYL F+S AA +AQRA+H RWFA ++I+A FM + Y+ KF
Sbjct: 292 TAGFVYLHFDSVAAATAAQRALHGRWFAGKMITATFMTAQQYKMKF 337
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 246/393 (62%), Positives = 284/393 (72%), Gaps = 36/393 (9%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREE-KSERSYRKREDSEEEEEEEKSRSG 59
M+FDEYEYLEKTVEEQ +D DSS KK + KSER+YRK ++ + E RS
Sbjct: 1 MDFDEYEYLEKTVEEQ---PEDKDSSKKKNTDITDIKSERTYRKHGIDDDLDGGEDRRS- 56
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHR------RDRDRDRDRG-RERERETERDRERS 112
KRSR D+ENGS++DRDRDRDR+++R R R+RD +RG RE+ERE + +R
Sbjct: 57 KRSR-GGDDENGSKKDRDRDRDRERDREHRERSSGRHRERDGERGSREKEREKDVERGGR 115
Query: 113 RERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+ R++E+E+ER R ++ RD ER R + R S SR ER+R
Sbjct: 116 DKERDREREKERERRDKEREKERERRDKEREKERAEREKEEKERPRRSMSRPERDRG--- 172
Query: 173 ERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKA
Sbjct: 173 -------------------ERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVM 292
TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVM
Sbjct: 214 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVM 273
Query: 293 VKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
VKPSEAEKNLVQSN S+G GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQ
Sbjct: 274 VKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQ 333
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LPLD+ETG CKGFGFVQFA LEHAKAAQS LNG
Sbjct: 334 LPLDMETGHCKGFGFVQFAHLEHAKAAQS-LNG 365
>gi|293336330|ref|NP_001169267.1| uncharacterized protein LOC100383130 [Zea mays]
gi|223975957|gb|ACN32166.1| unknown [Zea mays]
gi|413934151|gb|AFW68702.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 318
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 248/324 (76%), Gaps = 16/324 (4%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 452
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G +G
Sbjct: 116 VIKVSAVTDHVGVQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGA 175
Query: 453 A----PA--VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKN 505
A PA V G+A +S V +VP APV+P A I S P+E LLLKN
Sbjct: 176 AGVAVPATSVIGAAGAASLLSPTVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKN 231
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 565
MFDP++ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+
Sbjct: 232 MFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQAL 291
Query: 566 HMRWFARRLISAIFMKPEDYEAKF 589
H RWFA ++I+A FM ++Y KF
Sbjct: 292 HGRWFAGKMITATFMSDQEYSTKF 315
>gi|226509668|ref|NP_001142242.1| uncharacterized protein LOC100274411 [Zea mays]
gi|194690874|gb|ACF79521.1| unknown [Zea mays]
gi|194707772|gb|ACF87970.1| unknown [Zea mays]
gi|414871307|tpg|DAA49864.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
gi|414871308|tpg|DAA49865.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 318
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 243/322 (75%), Gaps = 12/322 (3%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE QLR++FEPFG VELVQLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GS 449
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+
Sbjct: 116 VIKVSAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGA 175
Query: 450 LGVA-PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMF 507
GVA PA + A LP VP APV+P + +P+E LLLKNMF
Sbjct: 176 AGVAVPATSVIGAPGAASLLPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMF 233
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
DPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AAA AQ A+H
Sbjct: 234 DPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAAKAQNALHG 293
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
RWFA ++I+A FM +Y KF
Sbjct: 294 RWFAGKMITATFMSALEYSTKF 315
>gi|224103159|ref|XP_002312948.1| predicted protein [Populus trichocarpa]
gi|222849356|gb|EEE86903.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 210/361 (58%), Positives = 247/361 (68%), Gaps = 50/361 (13%)
Query: 230 LKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQ 289
LKA ERDVYEFFS+AGKVRDVRLIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQ LLGQ
Sbjct: 5 LKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQ 64
Query: 290 PVMVKPSEAEKNLVQSNTS-AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPV 348
PVMVKPSEAEKNLVQS T+ A G GPY R+LY+GNLHFN+TE QLR++FEPFG V
Sbjct: 65 PVMVKPSEAEKNLVQSTTAVASGGLIGPYTGGARRLYIGNLHFNITEDQLRQVFEPFGAV 124
Query: 349 ELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDT 408
ELVQLP D E G CKGFGFVQFA+LE A+ A + LNG++EI GR +KVS+VTD G QD
Sbjct: 125 ELVQLPHD-EGGHCKGFGFVQFARLEDARNALN-LNGQVEIAGRPIKVSAVTDQAGAQDG 182
Query: 409 AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL 468
DFDDD+GGGLALNA+SRALLMQKLDRTG A+SI GSLG P + +
Sbjct: 183 GTNVGDFDDDEGGGLALNARSRALLMQKLDRTGTASSITGSLGT-PTLP---------TA 232
Query: 469 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEE 528
P++G PAV+ + P ++ + P L + + PA
Sbjct: 233 PILGA----APAVSPAIAPLLSGSVLAIPG--LPVAGLQLPA------------------ 268
Query: 529 CSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
SAGFVY+RFE+ + A +AQRA+H RWFA ++I+A FM P+ YEAK
Sbjct: 269 -------------TNSAGFVYMRFENMQGAVNAQRALHGRWFAGKMITATFMVPQTYEAK 315
Query: 589 F 589
F
Sbjct: 316 F 316
>gi|413934152|gb|AFW68703.1| hypothetical protein ZEAMMB73_109361 [Zea mays]
Length = 300
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 235/324 (72%), Gaps = 34/324 (10%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE QLR++FEPFG VELVQLPLD TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPLDAMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 452
+KVS+VTDHVG Q + GG SRA LM KLDR+G ATS+ G +G
Sbjct: 116 VIKVSAVTDHVGVQAS------------GG------SRAALMLKLDRSGTATSLTGGIGA 157
Query: 453 A----PA--VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-PSECLLLKN 505
A PA V G+A +S V +VP APV+P A I S P+E LLLKN
Sbjct: 158 AGVAVPATSVIGAAGAASLLSPTVSAVGSVP----GAPVLPITAQNVIMSTPTEFLLLKN 213
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 565
MFDP++ETDPDFDL+I+ DV++ECSK+G VKHI+VDK +AGFVYL+F+S AA AQ+A+
Sbjct: 214 MFDPSLETDPDFDLDIRDDVQDECSKFGAVKHIFVDKNTAGFVYLQFDSVTAAGKAQQAL 273
Query: 566 HMRWFARRLISAIFMKPEDYEAKF 589
H RWFA ++I+A FM ++Y KF
Sbjct: 274 HGRWFAGKMITATFMSDQEYSTKF 297
>gi|78708721|gb|ABB47696.1| splicing factor, CC1-like family protein, expressed [Oryza sativa
Japonica Group]
gi|215695222|dbj|BAG90413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 320
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 248/327 (75%), Gaps = 19/327 (5%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
MSVPMAIAL+GQ+LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASG--GA--RKLYVGNLHSN 56
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE QLR++FEPFG VELVQLP+D TG CKGFGF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGV 452
+KVS+VT+ G Q A + D DDD+GGGLALNA SRA+LM+KLDR+G ATSI G +G+
Sbjct: 116 VIKVSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGGIGI 175
Query: 453 APAVNGS----AVNQQAISLPVVG--QPAVP----VPAVTAPVIPNMAAEFIGSPSECLL 502
P VN S + + LP QP +P VP + IP + IGSP+E LL
Sbjct: 176 -PGVNTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQ---IPGTQSADIGSPTEFLL 231
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
LKNMFDPA+ETDPDFDL+I+ DV++ECSK+G V HI+VDK +AGFVYL F+S AA +AQ
Sbjct: 232 LKNMFDPAVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQ 291
Query: 563 RAMHMRWFARRLISAIFMKPEDYEAKF 589
RA+H RWFA ++I+A FM + Y+ KF
Sbjct: 292 RALHGRWFAGKMITATFMTAQQYKMKF 318
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 167/194 (86%), Positives = 178/194 (91%), Gaps = 1/194 (0%)
Query: 192 ERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR 251
ERD E R+ RR+++KKE VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR
Sbjct: 10 ERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR 69
Query: 252 LIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGG 311
LIMDRNSRRSKGVGYIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN S+G
Sbjct: 70 LIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGA 129
Query: 312 TATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
GPYGA+DRKLYVGNLHFNMTE LR++FEPFG +E+VQLPLD+ETG CKGFGFVQFA
Sbjct: 130 AVVGPYGAVDRKLYVGNLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFA 189
Query: 372 QLEHAKAAQSALNG 385
LEHAKAAQS LNG
Sbjct: 190 HLEHAKAAQS-LNG 202
>gi|414871306|tpg|DAA49863.1| TPA: hypothetical protein ZEAMMB73_656561 [Zea mays]
Length = 357
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 243/361 (67%), Gaps = 51/361 (14%)
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
MSVPMAIALSGQ LLGQ VMVKPSEAEKNLVQSN ++GG A+G GA RKLYVGNLH N
Sbjct: 1 MSVPMAIALSGQPLLGQAVMVKPSEAEKNLVQSNATSGGAASG--GA--RKLYVGNLHSN 56
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE QLR++FEPFG VELVQLP+D TG CKG+GF+QFA+LE AKAAQS LNG+L+I GR
Sbjct: 57 ITEDQLRQVFEPFGQVELVQLPVDPMTGLCKGYGFIQFARLEDAKAAQS-LNGQLDIAGR 115
Query: 393 TLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA---GS 449
+KVS+VTDHVG Q + A + D DDD+GGGLALNA SRA LM KLDR+G ATS+ G+
Sbjct: 116 VIKVSAVTDHVGMQASGATTGDLDDDEGGGLALNASSRAALMLKLDRSGTATSLTRGIGA 175
Query: 450 LGVA-PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF-IGSPSECLLLKNMF 507
GVA PA + A LP VP APV+P + +P+E LLLKNMF
Sbjct: 176 AGVAVPATSVIGAPGAASLLPPTVAAVGSVPG--APVLPVTTQNVTMSTPTEFLLLKNMF 233
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK------------------------- 542
DPA+ETDPDFDL+I+ DV++ECSK+G VKHI+VDK
Sbjct: 234 DPALETDPDFDLDIRDDVQDECSKFGAVKHIFVDKCYYIFLKTGSTLEKIDLGQVNYNLD 293
Query: 543 --------------RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
+AGFVYL+F+S AAA AQ A+H RWFA ++I+A FM +Y K
Sbjct: 294 AGSGICLGCPTIVVNTAGFVYLQFDSVTAAAKAQNALHGRWFAGKMITATFMSALEYSTK 353
Query: 589 F 589
F
Sbjct: 354 F 354
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 241/618 (38%), Positives = 317/618 (51%), Gaps = 151/618 (24%)
Query: 2 EFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKR 61
EFDEY YLEK +E + DD + K++ KRE+K
Sbjct: 3 EFDEYAYLEKQLEAKDANGHKDDGTHKRE-KREKK------------------------- 36
Query: 62 SRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKE 121
DR RDRD ER R RD+DRDR + RE R+K +
Sbjct: 37 ---------------DRTRDRDSERERT-RDQDRDR-----------KSSKREHRDKSPD 69
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERE 181
RER+ ERD R+ SSR R S RRER RE +
Sbjct: 70 RERKRHHSSHDHHRSERD--RKHSSRPR---------SLEKRRERTPPEVRE-------Q 111
Query: 182 RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFF 241
RE+EREL+E +RD+ RTVFAY +PLKA ERD++EFF
Sbjct: 112 REKERELKELDRDI-------------------------RTVFAYNLPLKAEERDLFEFF 146
Query: 242 SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN 301
SKAG + DV++IMDRN+R+SKG YIE+ + + A+AL+GQ+L+GQ VMVK SEAEKN
Sbjct: 147 SKAGPIEDVKIIMDRNTRKSKGFAYIEYTNKADIVTAMALTGQILMGQAVMVKSSEAEKN 206
Query: 302 LVQSNTSA-----------GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
L A G TGP KLY+GNLH N+ E L+++FE FG VE
Sbjct: 207 LAWEAAQAQNASMLQMSTIGNAGTGPC-----KLYIGNLHPNIQEQDLKQVFEAFGAVEY 261
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR--TLKVSSVTD-HVGTQD 407
+ L D TG+ +G+GFVQ+ A A L+G L+I G ++K++ +T
Sbjct: 262 ITLQKD-PTGRSQGYGFVQYQTTPDATKAMQQLDG-LDIAGSQISVKIAPLTPAETAAAA 319
Query: 408 TAAKSADFDDDDG--GGLALNAQSRALLMQKLD-RTGIATSIAGSLGVAPAVNGSAVNQQ 464
AA D DD +G GGL L A +RA LMQ+L T + IA +LG
Sbjct: 320 AAAAGLDLDDAEGEHGGLKLTANARAALMQRLSGPTDLGVLIADALG------------- 366
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS-----------PSECLLLKNMFDPAMET 513
P+ G PA+ VPA T V+ + A+ + P++CLLLKNMFDP ET
Sbjct: 367 ----PLPGPPAM-VPAGT--VVMSAGAQALAMEQGILGPSSPIPTQCLLLKNMFDPKEET 419
Query: 514 DPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARR 573
+PD+D EI DV EECSKYG V H +VDK S GFVYL+F + E +A+AQ+A+H RWFA R
Sbjct: 420 EPDWDQEIATDVTEECSKYGPVSHTHVDKNSKGFVYLKFVTVEGSAAAQKALHGRWFAGR 479
Query: 574 LISAIFMKPEDYEAKFKS 591
+ A F + Y + F++
Sbjct: 480 QVVAEFQFTQIYNSYFQT 497
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 247/418 (59%), Gaps = 35/418 (8%)
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
R+R + R ++ER +R + + + + + PE ERD RTVF Q+ + RD+ +
Sbjct: 110 RKRSKTRSPVKKERS-PVRLDKTFIQPIDNLTPE---ERDARTVFCMQLAARIRARDLED 165
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAE 299
FFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP+AI L+GQ LLG P++V+ S+AE
Sbjct: 166 FFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAE 225
Query: 300 KN-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
KN + + ++GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D E
Sbjct: 226 KNRAAAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSE 280
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 418
TG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ D++ S+ D+D
Sbjct: 281 TGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSILDND 336
Query: 419 DG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV-GQP 474
+ G+ L R LM +L + TG L + PA + ++S P + G P
Sbjct: 337 ELERTGIDLGTTGRLQLMARLAEGTG--------LKIPPAAQQALQMTGSMSFPTIGGPP 388
Query: 475 AVPVPAVTAPVIPNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 532
AVP P+ P+ A P + CL L N+F+P E DP + +EIQ DV EEC+K+
Sbjct: 389 AVPTPS------PSQALNLPAQPLATHCLQLSNLFNPQAENDPSWAVEIQDDVIEECNKH 442
Query: 533 GRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G V HIYVDK SA G VY++ S AA + A+H RWFA ++I+A ++ Y F
Sbjct: 443 GGVVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLF 500
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 286/528 (54%), Gaps = 48/528 (9%)
Query: 72 SRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDRE 131
S+RDR RD +K R +RDRD+ R R RD++R RE++++R RER DR
Sbjct: 14 SKRDRSHSRDHEK-RSKRDRDKHDKRSRNSRSRHSRDKDR-HSSRERDRDRHSRER-DRH 70
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRER 191
RER+R+ R R + + R R RER+R S R L
Sbjct: 71 SSRERDRNRHSRDRDRYSKDRDRRSRDRDRHSRERDRYSRERDRYRSRRRSISPNNLAPH 130
Query: 192 ERDLEM--------RESRRY-KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFS 242
+ E R+S + K + + PE ERDQRTVF Q+ + RD+ EFFS
Sbjct: 131 LLNNEYAYKKYASYRKSPTFSKLPIDDLTPE---ERDQRTVFCMQLSQRIRGRDLEEFFS 187
Query: 243 KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL 302
GKVRDV+LI +RR KG+ Y+EF D SVP+A+ L+GQ LLG P+ V+P++AEKN
Sbjct: 188 SVGKVRDVKLITCNKTRRFKGIAYVEFKDPESVPLAMGLTGQKLLGIPISVQPTQAEKNR 247
Query: 303 VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 362
++T+ + G + +LYVG+LHFN+TE LR +FEPFG ++ +QL +D ETG+
Sbjct: 248 QGNSTAPMMMPSDMRGPM--RLYVGSLHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRS 305
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA-DFDDDDGG 421
KG+GF+ F + AK A LNG E+ GR +KV +V + T + A S D D+ D
Sbjct: 306 KGYGFITFHSADDAKKALEQLNG-FELAGRPMKVGNVQER--TDNIAGTSILDTDELDRS 362
Query: 422 GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAV 481
G+ L A R LM KL A G+ + A +LP QPA P+
Sbjct: 363 GIDLGATGRLQLMYKL---------AEGTGMQIPPAAATALNLANALPQAVQPAPPI--- 410
Query: 482 TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVD 541
++C +L NMFDPA ET+P +D+EI+ DV EEC+K+G V H+YVD
Sbjct: 411 ---------------ATQCFMLANMFDPATETNPTWDVEIRDDVIEECNKHGGVLHVYVD 455
Query: 542 KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
K S G VY++ + A ++ ++H RWFA R+I+A ++ +Y + F
Sbjct: 456 KTSNGNVYVKCPTIATAVASVNSLHGRWFAGRIITAAYVPLLNYHSHF 503
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 228/381 (59%), Gaps = 31/381 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP
Sbjct: 128 ERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSVP 187
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
+AI L+GQ LLG P++V+ S+AEKN + + ++GP +LYVG+LHFN+TE
Sbjct: 188 LAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGPM-----RLYVGSLHFNITE 242
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
LR +FEPFG +E +QL +D ETG+ KG+GF+ FA E AK A LNG E+ GR +K
Sbjct: 243 EMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMK 301
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGV 452
V VT+ D++ S+ D+D+ G+ L R LM +L + TG L +
Sbjct: 302 VGHVTER---SDSSTASSILDNDELERTGIDLGTTGRLQLMARLAEGTG--------LKI 350
Query: 453 APAVNGSAVNQQAISLPVV-GQPAVPVPAVTAPVIPNMAAEFIGSP--SECLLLKNMFDP 509
PA + ++S P + G PAVP P+ P+ A P + CL L N+F+P
Sbjct: 351 PPAAQQALQMTGSMSFPTISGPPAVPTPS------PSQALNLPAQPLATHCLQLSNLFNP 404
Query: 510 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 568
E DP + +EIQ DV EEC+K+G V HIYVDK S G VY++ S AA + A+H R
Sbjct: 405 QAENDPSWAVEIQDDVIEECNKHGGVVHIYVDKNSTQGNVYVKCPSIPAAMATVNALHGR 464
Query: 569 WFARRLISAIFMKPEDYEAKF 589
WFA ++I+A ++ Y F
Sbjct: 465 WFAGKMITAAYVPLPTYHNLF 485
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/481 (38%), Positives = 264/481 (54%), Gaps = 53/481 (11%)
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
+E++R R R +R SR R+S ++ + ++ + + R+R R +
Sbjct: 76 KERKRSRSRSKDRGGRSRGRKSPFMGQKLNGGP----GGKTGPQHFPKHSRKRSRSKSPF 131
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADP----ERDQRTVFAYQMPLKATERDVYEFFSKAG 245
++E+ ++ +K+ K V D ERD RTVF Q+ + RD+ +FFS G
Sbjct: 132 KKEKSPFKKDKSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVG 191
Query: 246 KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS 305
KVRDVR+I DRNSRRSKG+ Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +
Sbjct: 192 KVRDVRMISDRNSRRSKGIAYVEFVDSTSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 251
Query: 306 NTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 362
S GG GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+
Sbjct: 252 MASMLQRGG--AGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRS 304
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG-- 420
KG+GF+ FA E AK A LNG E+ GR +KV VT+ D ++ S+ D+D+
Sbjct: 305 KGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDASSASSFLDNDELER 360
Query: 421 GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVV 471
G+ L R LM +L + TG+ A ++GS+ N SA
Sbjct: 361 TGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVSFGNMPNASAT---------- 410
Query: 472 GQPAVPVPAVTAPVIPNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
P +P P + N A P + CL L NMF+P ME +P +D+EI+ DV EEC
Sbjct: 411 -PPLIPNPGM------NQAMNLPTQPLATHCLQLSNMFNPQMENEPGWDIEIRDDVIEEC 463
Query: 530 SKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
K+G V HIYVDK SA G VY++ + A + ++H RWFA ++I+A ++ Y
Sbjct: 464 RKHGGVIHIYVDKNSAQGNVYVKCPTIPVAMAVVSSLHGRWFAGKMITAAYVPLPTYHNL 523
Query: 589 F 589
F
Sbjct: 524 F 524
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 223/380 (58%), Gaps = 48/380 (12%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
E+DQRTVF Q+ RD+ EFFSK G+V DVR+I DRNSRRSKG+ YIEF D +VP
Sbjct: 115 EKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVP 174
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+AI LSGQ LLG P+MV ++AEKN + + GP +LYVG+LHFN+TE
Sbjct: 175 LAIGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGP-----TRLYVGSLHFNITEA 229
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
++ +FEPFG V+ VQL D ET + KG+GFVQF + E AK A +NG E+ GR LK+
Sbjct: 230 MVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNG-FELAGRPLKI 288
Query: 397 SSVTDHVGTQDTAAKSADFDDD---DGGGLALNAQSRALLMQKLDR---TGIATSIAGSL 450
VT+ D++A S F DD + GG+ LN+ +RA LM KL + G++
Sbjct: 289 GPVTER---GDSSAYS--FLDDEEYEKGGVELNSSARAALMAKLSQGHSAGLSVP----- 338
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
G P V+G QQA++ PV + P+ C +L NMFDP
Sbjct: 339 GAPPIVSGV---QQALATPVA----------------------VSLPTPCFMLTNMFDPT 373
Query: 511 METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRW 569
E D +DL+I+ DV EEC+K+G + HI+VDK S G VY++ + + A SA +++H RW
Sbjct: 374 KERDAGWDLDIRDDVLEECNKFGPIVHIHVDKNSPQGIVYVKCATPDIAISASKSLHGRW 433
Query: 570 FARRLISAIFMKPEDYEAKF 589
FA + I A + +Y F
Sbjct: 434 FAGKQIIAAPVPLSNYHTMF 453
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 250/446 (56%), Gaps = 83/446 (18%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
EAD RD+RTVFA +P++A+E +++EFF KAGKV D+RLI DRNSR+SKG GYIE+ D
Sbjct: 163 EAD--RDERTVFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDK 220
Query: 273 MSVPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
SVP+A+ L+G GQ V+V+ ++AEKN + +A P + +LYVGNLH
Sbjct: 221 SSVPLALHQLNGTQCKGQTVLVQITQAEKNRAAAAAAAAAANAPPSLSAPTRLYVGNLHT 280
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
++ E LR +FEPFG ++ + L +D ETG+ KGF FVQ+ E AK A NG +E+ G
Sbjct: 281 DLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHCNG-MELAG 339
Query: 392 RTLKVSSVTDHVGTQDTAAKSADFD--------------------------------DDD 419
R LKV V+D GT A DD+
Sbjct: 340 RQLKVGIVSDP-GTLTAGGPGAGLGGPIGFGGGGAFGGGGGFGGGGFGGGGGGLNELDDE 398
Query: 420 GGGLALNAQSRALLMQKL-DRTGIA--TSIAGS-----------LGVAPAVNGSAVNQQA 465
GGGL LNAQSRA+LM +L +TG A S+ G+ LG+ P V
Sbjct: 399 GGGLGLNAQSRAMLMARLAGQTGGAGFPSLPGAPMGFHGMTPAGLGLLPGV--------- 449
Query: 466 ISLPVVGQPAVP-VPAVT------APVIPNMAAEFIG--------SP-----SECLLLKN 505
LP +G P +P +P+ +P++P A + +P S +LLKN
Sbjct: 450 --LPGLGMPGMPGLPSALGGLGAPSPLLPTAGAMPMPTPIIPPTVAPRPVVASAFMLLKN 507
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRA 564
MFDPA ET+P+F L+IQ DV EECSKYG+V +V + S +G VYLRFES+E AA A +A
Sbjct: 508 MFDPAQETEPNFHLDIQEDVTEECSKYGKVLQCHVVRDSPSGLVYLRFESSEGAAKAIQA 567
Query: 565 MHMRWFARRLISAIFMKPEDYEAKFK 590
++ RWFA ++ISA F+ + A K
Sbjct: 568 LNGRWFAGKVISAEFIDENTFAAGCK 593
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 225/385 (58%), Gaps = 28/385 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP
Sbjct: 152 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLEANSVP 211
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G A GP +LYVG+LHFN+T
Sbjct: 212 LAIGLTGQRLLGVPIIVQASQAEKNRAAAMANNLQKGNA-GPM-----RLYVGSLHFNIT 265
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG +E +QL +D ET + KG+GF+ FA E AK A LNG E+ GR +
Sbjct: 266 EDMLRGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQLNG-FELAGRPM 324
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI--------ATS 445
KV +VT+ + TA+ D D+ + G+ L R LM +L + TG+ A
Sbjct: 325 KVGNVTERTDS-STASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQ 383
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
++GS+ + G+ AI+ P + A+ P P + CL L N
Sbjct: 384 MSGSMHSSSIHFGNMAAGTAIANPALNLGPSMNQAMNLPTQP--------LATHCLQLSN 435
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRA 564
MF P E +P +D+EIQ DV EEC+K+G + HIYVDK S G VY++ + A +A A
Sbjct: 436 MFSPQSENEPGWDIEIQDDVMEECNKHGGIVHIYVDKNSPQGNVYVKCPTIPTAMAAVNA 495
Query: 565 MHMRWFARRLISAIFMKPEDYEAKF 589
+H RWFA ++I+A ++ Y F
Sbjct: 496 LHGRWFAGKMITAAYVPLPTYHNLF 520
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 245/441 (55%), Gaps = 54/441 (12%)
Query: 172 RERELELERERERERELRERERDLEMRE-----SRRYKEKKEVVEP--EADPE-RDQRTV 223
R +E R R ++R R + R +R+ S KE+ V +P PE RD RTV
Sbjct: 92 RSKEHHRSRSRSKDRTGRYKARKSPVRKRTKSRSPPKKERSPVRQPIDNLTPEERDARTV 151
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG 283
F Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP+AI L+G
Sbjct: 152 FCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVETSSVPLAIGLTG 211
Query: 284 QLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 341
Q LLG P++V+ S+AEKN + + G+A GP +LYVG+LHFN+TE LR +
Sbjct: 212 QRLLGVPIIVQASQAEKNRAAAAANNLQKGSA-GPM-----RLYVGSLHFNITEEMLRGI 265
Query: 342 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 401
FEPFG +E +QL +D ETG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+
Sbjct: 266 FEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTE 324
Query: 402 HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI--------ATSIAGSL-- 450
TA+ D D+ + G+ L R LM +L + TG+ A + GS+
Sbjct: 325 R-SDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSIPF 383
Query: 451 -GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
+A + QA++LP QP + CL L N+FDP
Sbjct: 384 GNMAAPAIPTPAPSQALNLP--SQPLA---------------------THCLQLSNLFDP 420
Query: 510 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 568
E DP + EIQ DV EEC+K+G V HIYVDK S G VY++ S AA + A+H R
Sbjct: 421 QAENDPAWASEIQDDVIEECNKHGGVVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGR 480
Query: 569 WFARRLISAIFMKPEDYEAKF 589
WFAR++I+A ++ Y F
Sbjct: 481 WFARKMITAAYVPLPTYHNLF 501
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 30/237 (12%)
Query: 80 RDRDKERHRRDRDRDRDR-GRERERETE-RDRERSRERREKEKERERR-------ERRD- 129
+ R KE HR R R +DR GR + R++ R R +SR +KE+ R+ E RD
Sbjct: 90 QSRSKEHHR-SRSRSKDRTGRYKARKSPVRKRTKSRSPPKKERSPVRQPIDNLTPEERDA 148
Query: 130 ------REKERERERDGERRSSSRSRR------SSSQSRRSSSRSRRERERESERERELE 177
+ R R RD E S+ + S SRRS + E S +
Sbjct: 149 RTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVETSSVPLAIG 208
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDV 237
L +R + + E ++R + + A P R ++ + TE +
Sbjct: 209 LTGQRLLGVPIIVQASQAE--KNRAAAAANNLQKGSAGPMR----LYVGSLHFNITEEML 262
Query: 238 YEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
F GK+ ++L+MD + RSKG G+I F D A+ L+G L G+P+ V
Sbjct: 263 RGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV 319
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 219/376 (58%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 235 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 294
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ T A + TGP +LYVG+LHFN+T
Sbjct: 295 LALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPM-----RLYVGSLHFNIT 349
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 350 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLM 408
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 409 KVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA------------- 452
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P P P V P++A ++C +L NMFDP ET+
Sbjct: 453 ---GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFILSNMFDPRTETN 501
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 502 PTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGR 561
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y F
Sbjct: 562 VITAAYLPVINYHTMF 577
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 219/376 (58%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 247 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVA 306
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ T A + TGP +LYVG+LHFN+T
Sbjct: 307 LALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHTGPM-----RLYVGSLHFNIT 361
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 362 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLM 420
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 421 KVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA------------- 464
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P P P V P++A ++C +L NMFDP ET+
Sbjct: 465 ---GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFILSNMFDPRTETN 513
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 514 PTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGR 573
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y F
Sbjct: 574 VITAAYLPVINYHTMF 589
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 217/376 (57%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 267 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVA 326
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +QS TGP +LYVG+LHFN+T
Sbjct: 327 LALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKLHTGPM-----RLYVGSLHFNIT 381
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++++QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 382 EDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRPM 440
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 441 KVGNVTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGA------------- 484
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P P P P++A ++C +L NMFDP ET+
Sbjct: 485 ---GLAVPQAAANALLATAPQ-PAPMQHEQQTPSIA-------TQCFILSNMFDPRTETN 533
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D E++ DV EEC+K+G V HI+VD SA G VY++ ST A A ++H RWFA R
Sbjct: 534 PTWDTEVRDDVLEECTKHGGVLHIHVDTVSATGTVYVKCPSTATAVLAVNSLHGRWFAGR 593
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 594 VITAAYVPLINYHSMF 609
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 220/381 (57%), Gaps = 37/381 (9%)
Query: 213 EADP-ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
E P ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D
Sbjct: 228 ELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDD 287
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNL 329
SV +A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +LYVG+L
Sbjct: 288 PESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----RLYVGSL 342
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
HFN+TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+
Sbjct: 343 HFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FEL 401
Query: 390 VGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGS 449
GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 402 AGRLMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA-------- 450
Query: 450 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
G AV Q A + + P P P V P++A ++C +L NMFDP
Sbjct: 451 --------GLAVPQAAANALLATAPQ-PAPLQQQEVAPSIA-------TQCFILSNMFDP 494
Query: 510 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMR 568
ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H R
Sbjct: 495 RTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGR 554
Query: 569 WFARRLISAIFMKPEDYEAKF 589
WFA R+I+A ++ +Y F
Sbjct: 555 WFAGRVITAAYVPVINYHTMF 575
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 183/499 (36%), Positives = 253/499 (50%), Gaps = 52/499 (10%)
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
S++ R R R + R R K+R + R RR S+ RS + R S RRE E
Sbjct: 43 SKKHRSGSPGRNRDKERRRSKDRSKSRSPARRDRSKD-RSKEKDRGKSDHHRREVVVEKR 101
Query: 172 RERE--------------------LELERERERERELRERERDLEMRESRRYKEKKEVVE 211
R R+ R + + R Y + +E
Sbjct: 102 RSRDRVDHRRRSRERDYRRRSRSRDGGRGMGRGRRSMSPKPYRGRGRGGSGYYRDRSPLE 161
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
+ +RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D
Sbjct: 162 EMSQEDRDARTVFCMQLSQRIHARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKD 221
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
SV +A+ LSGQ LLG P+ V+ ++AEKN + S P G + +LYVG+LHF
Sbjct: 222 PESVALALGLSGQKLLGIPISVQHTQAEKNRMASQPPV-APPKNPSGPM--RLYVGSLHF 278
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
N+TE L +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A LNG E+ G
Sbjct: 279 NITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNG-FELAG 337
Query: 392 RTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG 451
R +KV +VT+ + T S D D+ D G+ L A R LM KL A G
Sbjct: 338 RPMKVGNVTERLDV--TTHASLDTDEMDRSGIELGATGRLQLMFKL---------AEGAG 386
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
+A + PV QP + P + ++C LL NMFDPA
Sbjct: 387 LAVPRAAADALLATAPQPVPQQPIMQSPPIA---------------TQCFLLSNMFDPAT 431
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWF 570
ET+P++DLEIQ DV EEC+K+G V+H+YVDK+S +G VY++ S A A A+H RWF
Sbjct: 432 ETNPNWDLEIQDDVIEECNKHGGVQHVYVDKQSPSGNVYVKCPSIATAVLAVNALHGRWF 491
Query: 571 ARRLISAIFMKPEDYEAKF 589
A R+I A ++ +Y F
Sbjct: 492 AGRVIGAAYVPLINYYNLF 510
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 217/376 (57%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 232 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVA 291
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +LYVG+LHFN+T
Sbjct: 292 LALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----RLYVGSLHFNIT 346
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 347 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLM 405
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 406 KVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA------------- 449
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P P P P++A ++C +L NMFDP ET+
Sbjct: 450 ---GLAVPQAAANALLATAPQ-PAPMQQQEAAPSIA-------TQCFILSNMFDPRTETN 498
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 499 PTWDVEIRDDVLEECAKHGGVLHIHVDTISPTGTVYVKCPSTTTAVLAVNALHGRWFAGR 558
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y F
Sbjct: 559 VITAAYVPVINYHTMF 574
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 226/394 (57%), Gaps = 40/394 (10%)
Query: 202 RYKEKKEV--VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 259
RY++ + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++
Sbjct: 173 RYRDGSPLEELSPE---ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTK 229
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPY 317
R KG+ YIEF D SV +A+ LSGQ LLG P+ V+ ++AEKN + + GP
Sbjct: 230 RFKGIAYIEFRDPESVALALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPM 289
Query: 318 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 377
+LYVG+LHFN+TE LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK
Sbjct: 290 -----RLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAK 344
Query: 378 AAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
A LNG E+ GR +KV +VT+ + T S D D+ D G+ L A R LM KL
Sbjct: 345 KALEQLNG-FELAGRPMKVGNVTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKL 401
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP 497
+ G AV +A + + P QPA P +P I
Sbjct: 402 -----------AEGAGLAVPRAAADALLATAP---QPAPNQPVQDSPAI----------A 437
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTE 556
++C LL NMFDPA ET+P +D+EI+ DV EEC+K+G V H+YVDK+S AG VY++ S
Sbjct: 438 TQCFLLSNMFDPATETNPSWDVEIEDDVIEECNKHGGVLHVYVDKQSPAGNVYVKCPSIA 497
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
A A A+H RWFA R+I+A ++ +Y F+
Sbjct: 498 TAVLAVNALHGRWFAGRVIAAAYVPLVNYHTLFQ 531
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 239/423 (56%), Gaps = 44/423 (10%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R + R RE + + + PE ERD RTVF Q+ + RD+ EFFS GKVR
Sbjct: 97 RSKSRSPPKREKSPVRGPIDNLSPE---ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVR 153
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSN 306
DVR+I DRNSRRSKG+ Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +N
Sbjct: 154 DVRMISDRNSRRSKGIAYVEFVDQSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALAN 213
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
GTA GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+G
Sbjct: 214 NLQKGTA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 267
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 426
F+ F+ E AK A LNG E+ GR +KV VT+ + A+ D D+ + G+ L
Sbjct: 268 FITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLG 325
Query: 427 AQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQA---------IS 467
R LM +L + TG+ A ++GSL + ++QQ+ +
Sbjct: 326 TTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAASAA 385
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
+ Q +P PA T P+ ++C L NMF+P E + +D EI+ DV E
Sbjct: 386 TISLAQSPLPTPATTQPIA-----------TQCFQLSNMFNPQTEDELGWDSEIKEDVME 434
Query: 528 ECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
EC+K+G HIYVDK S G VY++ + +A +A A+H RWFA ++I+A ++ Y
Sbjct: 435 ECNKHGGAIHIYVDKNSPQGNVYVKCSTITSAIAAVNALHGRWFAGKMITAAYVPVPTYH 494
Query: 587 AKF 589
+ F
Sbjct: 495 SLF 497
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 224/377 (59%), Gaps = 31/377 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI +RR KG+ Y+EF + SVP
Sbjct: 5 ERDARTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLITCNKTRRFKGLCYVEFAEPESVP 64
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTAT-GPYGAIDRKLYVGNLHFNMT 334
+AIAL+GQ L G P++V+P++AEKN L SN A + GP G + +LYVG+LHFN+T
Sbjct: 65 LAIALTGQRLCGVPIVVQPTQAEKNRLAGSNMPAMSSFNKGPNGPM--RLYVGSLHFNIT 122
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG +E +QL +D ETG+ KG+GF+ F E AK A LNG E+ GR +
Sbjct: 123 EDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQLNG-FELAGRPM 181
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDR-TGIATSIAGSLGVA 453
K++ VT+H T D D+ D G+ L A R LM KL + TG+
Sbjct: 182 KINHVTEHFTGNHT---YLDSDEMDRAGIDLGATGRLQLMAKLAQGTGLEI--------- 229
Query: 454 PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 513
PA SA+N QA Q A+PV +V P+ ++C +L NMFD + ET
Sbjct: 230 PAAAQSALNLQASIQ-AAQQQALPVASVAPPI-----------ATQCFMLSNMFDSSSET 277
Query: 514 DPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFAR 572
P + EI DV +EC+K+G V HIYVDK S G VY++ S A +A A+H RWFA
Sbjct: 278 HPLWHQEICDDVMDECNKHGGVLHIYVDKASPQGNVYVKCPSVTVAVNAVNALHGRWFAG 337
Query: 573 RLISAIFMKPEDYEAKF 589
R+I+A ++ +Y + F
Sbjct: 338 RIITAAYVPLINYHSLF 354
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 219/376 (58%), Gaps = 32/376 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ +RR KG+ YIEF D SV
Sbjct: 160 ERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVT 219
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P++V+ ++AEKN + ++ TGP +LYVG+LHFN+T
Sbjct: 220 LALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTGPM-----RLYVGSLHFNIT 274
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ F E AK A LNG E+ GR +
Sbjct: 275 EDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNG-FELAGRPM 333
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + Q D D+ D G+ L A R LM KL G
Sbjct: 334 KVGNVTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAE-----------GAGM 382
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
V +A N +I+ GQP VP V P +A ++C +L NMFDPA E+
Sbjct: 383 QVPQAAANALSIA---TGQPV--VPQVQTNSTPPIA-------TQCFMLSNMFDPATEST 430
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 573
+D+EI+ DV EEC+K+G V H+YVDK S G VY++ S A ++ ++H RWFA R
Sbjct: 431 QTWDVEIRDDVIEECNKHGGVLHVYVDKGSPQGNVYVKCPSIATAVASVNSLHGRWFAGR 490
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 491 VITAAYVPLLNYHSLF 506
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 229/404 (56%), Gaps = 46/404 (11%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R+R R E +RR PE D RD+RTVF Q+ + T R+ FFS+AG+VR
Sbjct: 94 RKRSRTPERHTNRRGGRSPSPPVPEED--RDRRTVFVTQLAARLTTREFDAFFSQAGRVR 151
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSN 306
+ ++I DRNSR+SKG GY+EFYD SV A+ALSGQ LLG PV+V+ SEAEKN + +
Sbjct: 152 EAKIITDRNSRKSKGCGYVEFYDETSVQNALALSGQKLLGIPVLVQLSEAEKNRLAMAAQ 211
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
+A G T P + ++LY+G+LHF++TE +R++FEPFGP++ V L D ETG+ KGFG
Sbjct: 212 RNAMGVTTEP---LYQRLYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFG 268
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 426
F+Q+ AK A +NG E+ GR LKV V++ G T + DD++ GLALN
Sbjct: 269 FIQYKNANDAKQALEKMNG-FELAGRNLKVGLVSEKSG---TTMSTFGLDDEETEGLALN 324
Query: 427 AQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA-VTAPV 485
+ SRA LM KL A P P+ PA V P
Sbjct: 325 SLSRAELMAKL---------------------------AARDPQNSPPSRHAPAPVLKPN 357
Query: 486 IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA 545
IP + ++ +L NMF+P ETDPD+ +++ D++ EC KYGRV+HI V+ S
Sbjct: 358 IPTASTRYV-------MLNNMFNPNEETDPDWVSDLEADIKIECEKYGRVEHIKVNSDSM 410
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G V+L+F+ +A A A++ RWF + I+A + Y A
Sbjct: 411 GEVFLKFDRVGSAEKAISALNGRWFGGKQITAACISDAIYNANI 454
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 172/418 (41%), Positives = 239/418 (57%), Gaps = 32/418 (7%)
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERD 236
R R R +R+R R S KEK + P PE RD RTVF Q+ + RD
Sbjct: 90 RYRARRSPIRKRSRS----RSPFKKEKSPIRAPIDNLTPEERDARTVFCMQLAARIRARD 145
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 296
+ +FFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP+AI L+GQ LLG P++V+ S
Sbjct: 146 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQAS 205
Query: 297 EAEKN-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+AEKN + + ++GP +LYVG+LHFN+TE LR +FEPFG +E +QL +
Sbjct: 206 QAEKNRAAAAANNLQKGSSGPM-----RLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMM 260
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADF 415
D ETG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ D++ S+
Sbjct: 261 DSETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSFL 316
Query: 416 DDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 472
D+D+ G+ L R LM +L + TG L + PA + +I +G
Sbjct: 317 DNDELERTGIDLGTTGRLQLMARLAEGTG--------LKIPPAAQQALQMTGSIPFGGIG 368
Query: 473 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 532
PA + + N+ ++ + + CL L N+F+P E DP + EIQ DV EEC+K+
Sbjct: 369 APAAVPTPAPSQAL-NLPSQPLA--THCLQLSNLFNPQAENDPSWAAEIQDDVIEECNKH 425
Query: 533 GRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G + HIYVDK S G VY++ S AA + A+H RWFA ++I+A ++ Y F
Sbjct: 426 GGIVHIYVDKNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLF 483
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 234/404 (57%), Gaps = 47/404 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 182 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 241
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 242 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 299
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 300 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 355
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 356 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 411
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL + ++QQ L A A V
Sbjct: 412 LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVL-----------AAAASVQ 460
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
P ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 461 P--------LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 512
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y + F
Sbjct: 513 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 556
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 217/377 (57%), Gaps = 35/377 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 165 ERDMRTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFRDPESVA 224
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+ V+ ++AEKN + + GP +LYVG+LHFN+T
Sbjct: 225 LALGLSGQRLLGIPISVQHTQAEKNRLANIPPPPPPKVIVGPM-----RLYVGSLHFNIT 279
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A LNG E+ GR +
Sbjct: 280 EDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNG-FELAGRPM 338
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + T S D D+ D G+ L A R LM KL G
Sbjct: 339 KVGNVTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKLAE-----------GAGL 385
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
AV +A + + P QPA P +P I ++C LL NMFDPA ET+
Sbjct: 386 AVPRAAADALLATAP---QPAPNQPVQDSPAI----------ATQCFLLSNMFDPATETN 432
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D+EI+ DV EEC+K+G V H+YVDK+S AG VY++ S A A A+H RWFA R
Sbjct: 433 PSWDVEIEDDVIEECNKHGGVLHVYVDKQSPAGNVYVKCPSIATAVLAVNALHGRWFAGR 492
Query: 574 LISAIFMKPEDYEAKFK 590
+I+A ++ +Y F+
Sbjct: 493 VIAAAYVPLVNYHTLFQ 509
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/380 (41%), Positives = 220/380 (57%), Gaps = 38/380 (10%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ RD+ EFFS GKVRDVR+I +RR KG+ YIEF D SVP
Sbjct: 136 ERDARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRRFKGIAYIEFKDPESVP 195
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+A+ L+GQ LLG P++V+P++AEKN + +N+ YG + KLYVG+LH+N+TE
Sbjct: 196 LAMGLNGQKLLGVPIVVQPTQAEKNRM-ANSMPNMVQRTHYGPM--KLYVGSLHYNITEE 252
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LR +FEPFG V+ +QL +D ETG+ KG+GF+ + E AK A LNG EI GR +KV
Sbjct: 253 MLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHLNG-FEIAGRPMKV 311
Query: 397 SSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLGVA 453
VT++ D A + D+ D G L A R LM KL + TG I + A +L VA
Sbjct: 312 GHVTENHSVYDKTA--FEVDELDRAGYDLGATGRLQLMYKLAEGTGFPIPQAAANALQVA 369
Query: 454 PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA--- 510
V + PA P VT P+ ++C LL NMFDP
Sbjct: 370 SGVQAA--------------PAAPTVQVTPPIA-----------TQCFLLANMFDPNKED 404
Query: 511 METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRW 569
++++ ++ EI+ DV EEC+K+G V H+YVDK S G VY++ + E A ++ A+H RW
Sbjct: 405 VDSNTTWETEIRDDVIEECNKHGGVLHVYVDKASPQGNVYVKCTTIETALASVAALHGRW 464
Query: 570 FARRLISAIFMKPEDYEAKF 589
F R+I+A ++ +Y F
Sbjct: 465 FGGRVITAAYVPVTNYHNLF 484
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 215/376 (57%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 256 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVA 315
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +QS TGP +LYVG+LHFN+T
Sbjct: 316 LALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM-----RLYVGSLHFNIT 370
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 371 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRPM 429
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 430 KVGNVTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGA------------- 473
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P P P + P++A ++C +L NMFDP ET+
Sbjct: 474 ---GLAVPQAAANALLATAPQ-PAPVLQQQQTPSIA-------TQCFILSNMFDPRTETN 522
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P + +++ DV +EC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 523 PTWATDVRDDVLDECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAVNALHGRWFAGR 582
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 583 VITAAYVPVINYHSMF 598
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 234/404 (57%), Gaps = 47/404 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL + ++QQ V A A V
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQN-----------EVLAAAASVQ 411
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
P ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 412 P--------LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 463
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y + F
Sbjct: 464 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 507
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 234/404 (57%), Gaps = 47/404 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL + ++QQ V A A V
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQN-----------EVLAAAASVQ 411
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
P ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 412 P--------LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 463
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y + F
Sbjct: 464 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 507
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 234/403 (58%), Gaps = 43/403 (10%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
L + TG+ A ++GSL A A Q +S Q V A A V P
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSL----AFGAVADLQTRLS----QQSEVTALAAAASVQP 414
Query: 488 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-G 546
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G
Sbjct: 415 --------LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQG 466
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 467 NVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 174/404 (43%), Positives = 237/404 (58%), Gaps = 47/404 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 189 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 248
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 249 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 306
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 307 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 362
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 363 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 418
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL + + ++QQ+ L A A V
Sbjct: 419 LAEGTGLQIPPAAQQALQMSGSLAFSAVADLQTRLSQQSEVL-----------AAAASVQ 467
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
P +A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 468 P-LA-------TQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVVHIYVDKNSAQ 519
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 520 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 563
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 219/376 (58%), Gaps = 32/376 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ +RR KG+ YIEF D SV
Sbjct: 139 ERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGIAYIEFKDPESVT 198
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P++V+ ++AEKN + ++ TGP +LYVG+LHFN+T
Sbjct: 199 LALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMTGPM-----RLYVGSLHFNIT 253
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ F E AK A LNG E+ GR +
Sbjct: 254 EDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNG-FELAGRPM 312
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + Q D D+ D G+ L A R LM KL G
Sbjct: 313 KVGNVTERLDLQQQGPSILDSDELDRSGIDLGATGRLQLMFKLAE-----------GAGM 361
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
V +A N +I+ GQP VP V P +A ++C +L NMFDPA E+
Sbjct: 362 QVPQAAANALSIA---TGQPV--VPQVQTNSTPPIA-------TQCFMLSNMFDPATEST 409
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 573
+D+EI+ DV EEC+K+G V H+YVDK S G VY++ S A ++ ++H RWFA R
Sbjct: 410 QTWDVEIRDDVIEECNKHGGVLHVYVDKGSPQGNVYVKCPSIATAVASVNSLHGRWFAGR 469
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 470 VITAAYVPLLNYHSLF 485
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 224/383 (58%), Gaps = 26/383 (6%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ Y+EF
Sbjct: 189 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 245
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGN 328
DV SVP+A+ L+GQ L G P++V+P++AE+N + ++ ++T G + +LYVG+
Sbjct: 246 LDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGS 305
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
LHFN+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E
Sbjct: 306 LHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FE 364
Query: 389 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIA 447
+ GR +KV VT+ A D ++ D G+ L A R LM KL + TG A
Sbjct: 365 LAGRPMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQA 423
Query: 448 GSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF 507
AVN A+ LP GQP A A P +A ++C LL NMF
Sbjct: 424 -------AVN--ALQMNTTGLP--GQPQAAAVAAAAAAAPTIA-------TQCFLLSNMF 465
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMH 566
DP ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A+H
Sbjct: 466 DPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNALH 525
Query: 567 MRWFARRLISAIFMKPEDYEAKF 589
RWFA R+I+A ++ Y F
Sbjct: 526 GRWFAGRIITAAYVPVMSYHTLF 548
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 210/376 (55%), Gaps = 35/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 185 DRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKDPESVA 244
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+ V+ ++AEKN + S +GP +LYVG+LHFN+T
Sbjct: 245 LALGLSGQRLLGIPISVQHTQAEKNRMASTPPQPPPKVTSGPM-----RLYVGSLHFNIT 299
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + AK A LNG E+ GR +
Sbjct: 300 EDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNG-FELAGRPM 358
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + T S D D+ D G+ L A R LM KL A G+A
Sbjct: 359 KVGNVTERLDV--TTHASLDTDEMDRSGIDLGATGRLQLMFKL---------AEGAGLAV 407
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
+ P QP P P + ++C LL NMFDP ET+
Sbjct: 408 PRAAADALLATAPQPAPQQPVAPSPPIA---------------TQCFLLSNMFDPTTETN 452
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D EI+ DV EEC+K+G V H+YVDK + AG VY++ S A A A+H RWFA R
Sbjct: 453 PTWDTEIEDDVIEECNKHGGVLHVYVDKENPAGNVYVKCPSIATAVLAVNALHGRWFAGR 512
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y F
Sbjct: 513 IITAAYVPLVNYHTLF 528
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 234/403 (58%), Gaps = 43/403 (10%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 166 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 225
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 226 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 283
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 284 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 339
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 340 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 395
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
L + TG+ A ++GSL A A Q +S Q V A A V P
Sbjct: 396 LAEGTGLQIPPAAQQALQMSGSL----AFGAVADLQTRLS----QQSEVTALAAAASVQP 447
Query: 488 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-G 546
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G
Sbjct: 448 --------LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQG 499
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 500 NVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 542
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 234/405 (57%), Gaps = 38/405 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLP--VVGQPAVPVPAVTAPV 485
L + TG+ A ++GSL AV I L + Q V A A V
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFG-AVAAKIFFPFFIDLQTRLSQQSEVTALAAAASV 421
Query: 486 IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA 545
P ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 422 QP--------LATQCFQLSNMFNPQTEDELGWDTEIKDDVIEECNKHGGVIHIYVDKNSA 473
Query: 546 -GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 474 QGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 518
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 235/433 (54%), Gaps = 62/433 (14%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R + + + RE + + + PE ERD RTVF Q+ + RD+ EFFS GKVR
Sbjct: 125 RSKSKSPQKREKSPVRGPIDNLSPE---ERDARTVFCMQLAARIRPRDLEEFFSTVGKVR 181
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSN 306
DVR+I DRNSRRSKG+ Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +N
Sbjct: 182 DVRMISDRNSRRSKGIAYVEFVDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAAMAN 241
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
GTA GP +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+G
Sbjct: 242 NLQKGTA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYG 295
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 426
F+ F+ E AK A LNG E+ GR +KV VT+ + A+ D D+ + G+ L
Sbjct: 296 FITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLG 353
Query: 427 AQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG------------- 472
R LM +L + TG L + PA + +++ V
Sbjct: 354 TTGRLQLMARLAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEAL 405
Query: 473 ---------------QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 517
+P+PA T P+ ++C L NMF+P E + +
Sbjct: 406 AAAAASAATISLAAASSTLPIPATTQPIA-----------TQCFQLSNMFNPQTEDELGW 454
Query: 518 DLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
D EI+ DV EEC+K+G V HIYVDK S G VY++ + +A +A A+H RWFA ++I+
Sbjct: 455 DSEIKEDVIEECNKHGGVVHIYVDKNSPQGNVYVKCPTIASAIAAVNALHGRWFAGKMIT 514
Query: 577 AIFMKPEDYEAKF 589
A ++ Y + F
Sbjct: 515 AAYVPLPTYHSLF 527
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/412 (42%), Positives = 237/412 (57%), Gaps = 41/412 (9%)
Query: 200 SRRYKEKKEVVEPEADP-----------ERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
SRR+ + K V+ E P ERD RTVF Q+ + RD+ EFFS GKVR
Sbjct: 121 SRRWSKSKSPVKKEKSPIRMPNDNLTPEERDGRTVFCMQLAARIRPRDLEEFFSAVGKVR 180
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 308
DVR+I DRNSRRSKG+ YIEF + SVP+AI L+GQ LLG P++V+ S+AEKN + +
Sbjct: 181 DVRMISDRNSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAA 240
Query: 309 AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 368
A G G + +LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+
Sbjct: 241 ANNLQRGLTGPM--RLYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFI 298
Query: 369 QFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA-DFDDDDGGGLALNA 427
F+ E AK A LNG E+ GR +KV VT+ T ++A S D D+ + G+ L
Sbjct: 299 TFSDAECAKKALEQLNG-FELAGRPMKVGHVTER--TDPSSAPSILDNDELERSGIDLGT 355
Query: 428 QSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAI--SLPVVGQPAVPVPAVTAP 484
R LM +L + TG L + PA QQA+ S + V A P
Sbjct: 356 TGRLQLMARLAEGTG--------LQIPPAA------QQALQMSGAIAIGAMAAVSAAMNP 401
Query: 485 VI-PNMAAEFIGSPSE-----CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 538
+ NM + + PS+ C L NMF+P+ E ++++IQ DV EEC+K+G V HI
Sbjct: 402 SLNVNMNSGALNLPSQPLATHCFQLSNMFNPSSENTFGWEVDIQRDVIEECNKHGGVVHI 461
Query: 539 YVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
YVDK SA G VY++ S AA SA A+H R+F ++I+A ++ Y F
Sbjct: 462 YVDKNSAEGNVYVKCPSIPAAMSAVNALHGRFFGGKMITAAYVPLPTYHKLF 513
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 341 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 392
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 393 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 452
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 453 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 226/385 (58%), Gaps = 32/385 (8%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ Y+EF
Sbjct: 130 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 186
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGN 328
DV SVP+A+ L+GQ L G P++V+P++AE+N + ++ +T G + +LYVG+
Sbjct: 187 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGS 246
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
LHFN+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E
Sbjct: 247 LHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FE 305
Query: 389 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATS 445
+ GR +KV VT+ A D ++ D G+ L A R LM KL + TG I +
Sbjct: 306 LAGRPMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQA 364
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
+L + PAV LP GQP AV A P +A ++C LL N
Sbjct: 365 AVNALQMNPAV-----------LP--GQPQ--AAAVAAAAAPTIA-------TQCFLLSN 402
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRA 564
MFDP ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A
Sbjct: 403 MFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNA 462
Query: 565 MHMRWFARRLISAIFMKPEDYEAKF 589
+H RWFA R+I+A ++ Y F
Sbjct: 463 LHGRWFAGRIITAAYVPVMSYHTLF 487
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 341 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 392
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 393 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 452
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 453 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 341 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 392
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 393 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 452
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 453 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 213/376 (56%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 263 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVA 322
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ T A + GP +LYVG+LHF++T
Sbjct: 323 LALGLSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKSHVGPM-----RLYVGSLHFDIT 377
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ET + KG+GF+ + E AK A LNG E+ GR +
Sbjct: 378 EEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNG-FELAGRPM 436
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL A G+A
Sbjct: 437 KVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKL---------AEGAGLAV 484
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
+ P Q P++ ++C +L NMFDP ET+
Sbjct: 485 PQAAANALLATAPQPAPVQQQQATPSIA---------------TQCFILSNMFDPRTETN 529
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 530 PTWDVEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLAVNALHGRWFAGR 589
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 590 VITAAYVPVVNYHSMF 605
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 210 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 269
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 270 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 327
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 328 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 383
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 384 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 439
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 440 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 491
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 492 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 551
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 552 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 586
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 341 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 396
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 397 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 449
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 450 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 493
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 341 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 396
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 397 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 449
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 450 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 493
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 363 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 414
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 415 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 474
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 475 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 363 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 414
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 415 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 474
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 475 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 363 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 414
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 415 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 474
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 475 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 509
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 229/395 (57%), Gaps = 27/395 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 130 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 189
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 190 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 247
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 248 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 303
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 304 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 359
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 360 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 411
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 412 LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 471
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 506
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 234/404 (57%), Gaps = 47/404 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 34 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 93
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 94 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 151
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 152 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 207
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 208 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 263
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVVGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL + ++QQ V A A V
Sbjct: 264 LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQN-----------EVLAAAASVQ 312
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
P ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 313 P--------LATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 364
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y + F
Sbjct: 365 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 408
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 169/395 (42%), Positives = 230/395 (58%), Gaps = 38/395 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 111 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 170
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 171 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 228
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 229 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 284
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 285 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 340
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V A+ A P+
Sbjct: 341 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVAASALAAAASVQPL---------- 382
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 383 -ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 441
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 442 IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 476
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 226/385 (58%), Gaps = 32/385 (8%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ Y+EF
Sbjct: 142 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 198
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGN 328
DV SVP+A+ L+GQ L G P++V+P++AE+N + ++ +T G + +LYVG+
Sbjct: 199 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGS 258
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
LHFN+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E
Sbjct: 259 LHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FE 317
Query: 389 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATS 445
+ GR +KV VT+ A D ++ D G+ L A R LM KL + TG I +
Sbjct: 318 LAGRPMKVGHVTERTDVSQ-APSFLDSEELDRSGIDLGATGRLQLMAKLAEGTGFQIPQA 376
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
+L + PAV LP GQP AV A P +A ++C LL N
Sbjct: 377 AVNALQMNPAV-----------LP--GQPQ--AAAVAAAAAPTIA-------TQCFLLSN 414
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRA 564
MFDP ET+P +D EI+ DV EEC K+G H+YVD+ S G VY++ + +A ++ A
Sbjct: 415 MFDPLTETNPSWDEEIRRDVIEECRKHGGALHVYVDRASPEGHVYVKCPTIASAVASVNA 474
Query: 565 MHMRWFARRLISAIFMKPEDYEAKF 589
+H RWFA R+I+A ++ Y F
Sbjct: 475 LHGRWFAGRIITAAYVPVMSYHTLF 499
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELTGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 229/421 (54%), Gaps = 55/421 (13%)
Query: 203 YKEKKEVVEPEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
Y K+ P+ PE RD RTVF +Q+ K RD+ EFFS G VRDVRLI DRNSRRS
Sbjct: 28 YGPSKKKDLPDLPPEERDARTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRS 87
Query: 262 KGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAI 320
KG+ Y+EF D SVP+A+ LSGQ LL P+MV+ S+AEKN Q++ + +GP
Sbjct: 88 KGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNSGP---- 143
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
+LYVG+LHFN+TE LR +FEPFG ++ +QL D ETG+ KG+GF+ F E AK A
Sbjct: 144 -MRLYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKAL 202
Query: 381 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL- 437
LNG E+ GR +KV VT+ D A ++ D DD G+ L R LM KL
Sbjct: 203 EQLNG-FELAGRPMKVGHVTER---SDAATDASFLDSDDLERSGIDLGTTGRLQLMAKLA 258
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----------- 486
+ TG PA +A+N A LP +G P +P +
Sbjct: 259 EGTGFQV---------PAAAAAALNPLA-GLPGIGLPVLPGTTPPQVMPPQPVNLQASLA 308
Query: 487 -----------------PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
P ++ I +P C +L NMFDP ET +D EIQ DV EEC
Sbjct: 309 AAQQQAQQQAAALHQPPPTVSMPSIATP--CFMLSNMFDPTNETSSGWDREIQDDVIEEC 366
Query: 530 SKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
+K+G HIYVDK + G VY++ + + A A A+H RWFA ++I+A ++ +Y A
Sbjct: 367 NKHGGCVHIYVDKTNPLGVVYVKCATVQIAQMAVNALHGRWFAGKMITAAYVPLANYHAL 426
Query: 589 F 589
F
Sbjct: 427 F 427
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 175/402 (43%), Positives = 231/402 (57%), Gaps = 38/402 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
KEK V +P PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 130 KEKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRR 189
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSE--AEKN--LVQSNTSAGGTATGP 316
SKG+ YIEF + SVP+AI LSGQ LLG P++V+ S+ AEKN +N G A GP
Sbjct: 190 SKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMANNLQKGNA-GP 248
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E A
Sbjct: 249 M-----RLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECA 303
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 436
K A LNG E+ GR +KV VT+ TA+ D D+ + G+ L R LM +
Sbjct: 304 KKALDQLNG-FELAGRPMKVGHVTERTDAS-TASSFLDSDELERTGIDLGTTGRLQLMAR 361
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAI--SLPVVGQPAVPVPAVTAPVIPNMAAEF 493
L + TG L + PA QQA+ S + V A P +
Sbjct: 362 LAEGTG--------LQIPPAA------QQALQMSGAIAIGAMAAVSAAMNPAMNMNMNTA 407
Query: 494 IGSPSE-----CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GF 547
+ PS+ C L NMF+P E +PD+D++IQ DV EEC+K+G V HIYVDK S G
Sbjct: 408 MNLPSQPLATHCFQLSNMFNPQSEDNPDWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGN 467
Query: 548 VYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VY++ S AA +A A+H R+FA ++I+A ++ Y F
Sbjct: 468 VYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLF 509
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 124 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 183
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 184 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 241
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 242 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 297
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 298 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 353
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 354 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 409
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 410 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 462
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 463 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 506
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 227/384 (59%), Gaps = 30/384 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ YIEF + SVP
Sbjct: 122 ERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSVP 181
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+AI L+GQ LLG P++V+ S+AEKN + +A G G + +LYVG+LHFN+TE
Sbjct: 182 LAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPM--RLYVGSLHFNITED 239
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV
Sbjct: 240 MLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNG-FELAGRPMKV 298
Query: 397 SSVTDHVGTQDTAAKSA-DFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAP 454
VT+ T ++A S D D+ + G+ L R LM +L + TG L + P
Sbjct: 299 GHVTER--TDPSSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTG--------LQIPP 348
Query: 455 AVNGSAVNQQAI--SLPVVGQPAVPVPAVTAPVI-PNMAAEFIGSPSE-----CLLLKNM 506
A QQA+ S + V A P + NM + + PS+ C L NM
Sbjct: 349 AA------QQALQMSGAIAIGAMAAVSAAMNPSLNVNMNSGALNLPSQPLATHCFQLSNM 402
Query: 507 FDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAM 565
F+P+ E ++++IQ DV EEC+K+G V HIYVDK SA G VY++ S AA SA A+
Sbjct: 403 FNPSSENTFGWEVDIQRDVIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMSAVNAL 462
Query: 566 HMRWFARRLISAIFMKPEDYEAKF 589
H R+F ++I+A ++ Y F
Sbjct: 463 HGRFFGGKMITAAYVPLPTYHKLF 486
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYMEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/514 (37%), Positives = 275/514 (53%), Gaps = 46/514 (8%)
Query: 89 RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRS 148
RD++RDRD G R R+ ++DR RS R+KE+E++RR+ ++R K R R+ + +
Sbjct: 64 RDKERDRDGGEGRSRK-DKDRSRSPRPRDKEREKDRRKSKERSKSRSPRRERSKDHKEKD 122
Query: 149 RRSSSQSRRSSSRSRRERER-----ESERERELELERERERERELRERERDLEMRESRR- 202
RS + RS + RR RER + R+ R R R R+ R R + R RR
Sbjct: 123 HRSKNDHHRSVEK-RRSRERGGGMIDHRRKSRERDHRRRSRSRDAGRRRRSMSPRHYRRG 181
Query: 203 ------YKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
Y+++ E + +RD RTVF Q+ + RD+ EFFS GKVRDVRLI
Sbjct: 182 RGGYGSYRDRTPGDEVSQE-DRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCN 240
Query: 257 NSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP 316
++R KG+ YIEF D SV +A+ LSGQ LLG P+ V+ ++AEKN + +
Sbjct: 241 KTKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMANQPPPAPPKN-- 298
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
A +LYVG+LHFN+TE LR +FEPFG ++ +QL +D +TG+ KG+GF+ F + A
Sbjct: 299 -PAGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDA 357
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 436
K A LNG E+ GR +KV +VT+ + T S D D+ D G+ L A R LM K
Sbjct: 358 KKALEQLNG-FELAGRPMKVGNVTERLDV--TTHASLDTDEMDRSGIELGATGRLQLMFK 414
Query: 437 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 496
L + L V A + + +P P A ++ NM
Sbjct: 415 L-------AEGAGLAVPRAAADALLATAPQPIPQQPLQQSPPIATQCFLLSNM------- 460
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFEST 555
FDP+ ET+P++D+EIQ DV EEC+K+G V H+YVDK S +G VY++ +
Sbjct: 461 ----------FDPSTETNPNWDVEIQDDVIEECNKHGGVLHVYVDKLSPSGNVYVKCPNV 510
Query: 556 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
A A A+H RWFA R+I A ++ +Y F
Sbjct: 511 ATAVLAVNALHGRWFAGRVIGAAYVPLVNYYNLF 544
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 100 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 159
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 160 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 217
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 218 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 273
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 274 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 329
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 330 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 385
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 386 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 438
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 439 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 482
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 233/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 106 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 165
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 166 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 223
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 224 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 279
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 280 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 335
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 336 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 391
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 392 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 444
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 445 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 488
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 228/394 (57%), Gaps = 26/394 (6%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK-NLVQSNTSAGGTATGPYGA 319
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEK +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKRAAAMANNLQKGSA-GPM-- 249
Query: 320 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 379
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 250 ---RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKA 306
Query: 380 QSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL 437
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 307 LEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARL 362
Query: 438 -DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 496
+ TG L + PA + +++ V + T AA
Sbjct: 363 AEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPL 414
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFEST 555
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 415 ATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSI 474
Query: 556 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 475 AAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 508
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/403 (42%), Positives = 231/403 (57%), Gaps = 37/403 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 109 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 168
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 169 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 226
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 227 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 282
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 283 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 338
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
L + TG+ A ++GSL S V L Q A +
Sbjct: 339 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQ 395
Query: 488 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-G 546
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G
Sbjct: 396 PLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQG 448
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 449 NVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 491
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 227/421 (53%), Gaps = 60/421 (14%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
D ERD RT+F +Q+ K TE+DVY FFS AGKVRD+R+I+D+ S R KG Y+EFY +
Sbjct: 180 DYERDLRTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEA 239
Query: 275 VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS-----------------AGGTATGPY 317
+P A+ L+GQ L G PV +KPSEAEKN+ + +GG T P
Sbjct: 240 IPSAMRLAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPN 299
Query: 318 G--AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
KLYVG++HF+++E LR +FEPFG V +QL D ETG+ +GFGFVQ+ E
Sbjct: 300 SNPLTFTKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFVQYKNHED 359
Query: 376 AKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRAL--L 433
AK A LNG L++ GR LKV T +L++++ A
Sbjct: 360 AKKAFEQLNG-LDLAGRPLKVGLATAEAQKLQVLGAIPSGVPGTIAAQSLSSKNYAYSAY 418
Query: 434 MQKLDRTG-----------------------IATSIAGSLGV-APAVNGSAVNQQAISLP 469
+ +LD G +A+ + +LG +P + S + Q+ ++P
Sbjct: 419 ISELDEGGDSGMALSATQRTQLMQRLARGEALASKSSPALGGKSPGLLSSEASPQSGTVP 478
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
P++ ++ SPS CL+L+NMFDPA ETDP+F LE+Q DV +EC
Sbjct: 479 T-------RQGYNPPLVHSI------SPSTCLMLRNMFDPAQETDPNFHLEVQEDVRDEC 525
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
SK+G ++HI+VDK SAG VY++FE+ A A++ +H RWFA + ++ Y +
Sbjct: 526 ISKFGPLRHIFVDKNSAGLVYVQFETMSDAMKAKQGLHGRWFAGHQVIVEYISESVYYIR 585
Query: 589 F 589
F
Sbjct: 586 F 586
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 238/411 (57%), Gaps = 25/411 (6%)
Query: 185 ERELRERERDLEMRESRRYKEKKEVVEPEADPE-RDQRTVFAYQMPLKATERDVYEFFSK 243
ERE R+R + RY + PE PE RD RTVF Q+ + RD+ EFFS
Sbjct: 132 ERERRQRSNS---KSPMRYTRQPG---PELTPEERDARTVFCMQLSARIRPRDLEEFFSS 185
Query: 244 AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLV 303
GKVRDVRLIMD +RRSKG+ Y+EF D SVP+AI L+ Q LLG P++V+ S+AEKN V
Sbjct: 186 VGKVRDVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPIIVQHSQAEKNRV 245
Query: 304 QSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
+ TS G G + +LYVG+LHFN+TE LR +FEPFG ++ ++L D ET + +
Sbjct: 246 GNPTSI--LTKGNIGPM--RLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQ 301
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGL 423
G+GF+ F E AK A LNG E+ GR +KV VT+ G + A D D+ D G+
Sbjct: 302 GYGFITFHDSEDAKKALEQLNG-FELAGRPMKVGHVTERQG-EIQGASMLDSDEMDRAGI 359
Query: 424 ALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 482
L A R LM KL + TG AV+ + QQA + PA P P V+
Sbjct: 360 DLGATGRLQLMAKLAEGTGFQIP-------EYAVSALNITQQAPGVASAAPPAGPAPNVS 412
Query: 483 APVIPNMAAEFIGSP---SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY 539
A + A + +P ++C +L NMFDP E+ +D EI+ DV EEC+K+G V H+Y
Sbjct: 413 AILGSQAAGQDNTAPPIATQCFMLSNMFDPNAESRSSWDQEIRDDVIEECNKHGGVLHLY 472
Query: 540 VDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VDK S G VY++ + AA ++ RA+H R+F ++I+A ++ +Y + F
Sbjct: 473 VDKASPQGNVYVKCPTISAAVASVRALHGRYFGGKMITAAYVPLPNYHSLF 523
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/403 (42%), Positives = 231/403 (57%), Gaps = 37/403 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 32 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 91
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 92 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 149
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 150 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 205
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 206 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 261
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
L + TG+ A ++GSL S V L Q A +
Sbjct: 262 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRL---SQQTEASALAAAASVQ 318
Query: 488 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-G 546
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G
Sbjct: 319 PLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQG 371
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 372 NVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 414
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 210/376 (55%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI+ ++R KG+ YIEF D SV
Sbjct: 233 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVA 292
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +LYVG+LHFN+T
Sbjct: 293 LALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----RLYVGSLHFNIT 347
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 348 EDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLM 406
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 407 KVGNVTERL---DMNTSSLDTDEMDRTGIDLGATGRLQLMFKLAEGA------------- 450
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P FI L NMFDP ET+
Sbjct: 451 ---GLAVPQAAANALLATAPQPAPVQQQQQAPSIATQCFI--------LSNMFDPRTETN 499
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D EI+ DV EEC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 500 PTWDAEIRDDVLEECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAVNALHGRWFAGR 559
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 560 VITAAYVPLVNYHSMF 575
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 190/484 (39%), Positives = 265/484 (54%), Gaps = 31/484 (6%)
Query: 115 RREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRER---ERESE 171
+R K KER+R R+R+K + RER R R RS S+ RR R R + S
Sbjct: 15 KRSKSKERKRSRDRERKKSKSRERKRSRSKDRRRSRSRSRDRRFRGRYRSPYSGPKFNSA 74
Query: 172 RERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLK 231
++ L + R + ++ +E + + PE ERD RTVF Q+ +
Sbjct: 75 IRGKIGLPHSIKLSRRRSRSKSPFR-KDKSPVREPIDNLTPE---ERDARTVFCMQLAAR 130
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPV 291
RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +LG P+
Sbjct: 131 IRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPI 190
Query: 292 MVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
+V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEPFG +E
Sbjct: 191 IVQASQAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIE 244
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 409
+QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ D +
Sbjct: 245 SIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT---DAS 300
Query: 410 AKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAI 466
+ S+ D D+ G+ L R LM +L + TG L + PA + ++
Sbjct: 301 SASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQMSGSL 352
Query: 467 SLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVE 526
+ V + T AA ++C L NMF+P E + +D EI+ DV
Sbjct: 353 AFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVI 412
Query: 527 EECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 585
EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++ Y
Sbjct: 413 EECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTY 472
Query: 586 EAKF 589
F
Sbjct: 473 HNLF 476
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/404 (42%), Positives = 232/404 (57%), Gaps = 39/404 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
S+G+ Y+EF DV SV +AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SRGIAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 472 GNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 515
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 269/493 (54%), Gaps = 43/493 (8%)
Query: 115 RREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRER---ERESE 171
+R K KER+R R+R+K + RER R R RS S+ RR R R + S
Sbjct: 17 KRSKSKERKRSRDRERKKSKSRERKRSRSKDRRRSRSRSRDRRFRGRYRSPYSGPKFNSA 76
Query: 172 RERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLK 231
++ L + R + ++ +E + + PE ERD RTVF Q+ +
Sbjct: 77 IRGKIGLPHSIKLSRRRSRSKSPFR-KDKSPVREPIDNLTPE---ERDARTVFCMQLAAR 132
Query: 232 ATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPV 291
RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +LG P+
Sbjct: 133 IRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPI 192
Query: 292 MVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
+V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEPFG +E
Sbjct: 193 IVQASQAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIE 246
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 409
+QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ D +
Sbjct: 247 SIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT---DAS 302
Query: 410 AKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVNG 458
+ S+ D D+ G+ L R LM +L + TG+ A ++GSL
Sbjct: 303 SASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEF 362
Query: 459 SAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 517
S V I L + Q A + +A ++C L NMF+P E + +
Sbjct: 363 SFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQTEEEVGW 411
Query: 518 DLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+
Sbjct: 412 DTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMIT 471
Query: 577 AIFMKPEDYEAKF 589
A ++ Y F
Sbjct: 472 AAYVPLPTYHNLF 484
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 250/474 (52%), Gaps = 65/474 (13%)
Query: 140 GERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRE 199
G RSS + R ++ + R + + ++
Sbjct: 93 GHYRSSYSGPKFGGSGRG-------------------KIGIPHGVKLRRRSKSKSPPKKD 133
Query: 200 SRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 259
+ + + PE ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSR
Sbjct: 134 KSPVRGPIDNLSPE---ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSR 190
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPY 317
RSKG+ Y+EF D SVP+AI L+GQ +LG P++V+ S+AEKN +N GTA GP
Sbjct: 191 RSKGIAYVEFLDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAALANNLQKGTA-GPM 249
Query: 318 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 377
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 250 -----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAK 304
Query: 378 AAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
A LNG E+ GR +KV VT+ + A+ D D+ + G+ L R LM +L
Sbjct: 305 KALEQLNG-FELAGRPMKVGHVTERTDASN-ASSFLDSDELERTGIDLGTTGRLQLMARL 362
Query: 438 -DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQA-----------ISLPVVGQPAV 476
+ TG+ A ++GSL + ++QQ+ + + +
Sbjct: 363 AEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRISQQSEALAAAAAAASAASITLASATL 422
Query: 477 PVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVK 536
P+PA T P+ ++C L NMF+P E + +D EI+ DV EEC+K+G V
Sbjct: 423 PIPATTQPI-----------ATQCFQLSNMFNPQTEDELGWDSEIKEDVIEECNKHGGVV 471
Query: 537 HIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
H+YVDK SA G VY++ + +A +A A+H RWFA ++I+A ++ Y + F
Sbjct: 472 HLYVDKNSAQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF 525
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 197/534 (36%), Positives = 278/534 (52%), Gaps = 80/534 (14%)
Query: 87 HRRDRDRDRDRGRERERETERDRERSRERREKEKERERRE-RRDREKERERERDGERRSS 145
++ D D+ ER +R +SR R ++ K R+E +R R++ER+R R ER+ S
Sbjct: 15 YKTDEDKLSSANGHGERSKKRGESKSRSRTDEPKRSRRKEGKRSRDRERKRSRSPERKRS 74
Query: 146 SRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRR-YK 204
R S+SR R R R + ++R + L +R+ + +
Sbjct: 75 RSKERRRSRSRSRDGRFRGRYTSPYSRPK---------FNSDIRG-QTGLPLRKDKSPVR 124
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
E + + PE ERD RTVF Q+ + RD+ FFS GKVRDVR+I DRN+RRSKG+
Sbjct: 125 EPIDNLTPE---ERDARTVFCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGI 181
Query: 265 GYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDR 322
Y+EF DV SVP+AI L+GQ + G P++V+ S+AEKN +N G A GP
Sbjct: 182 AYVEFVDVSSVPLAIGLTGQRVFGVPILVRASQAEKNRAAAMANNLQKGRA-GPM----- 235
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+LH N+TE LR +FEPFG +E +QL D ETG+ KG+GF+ F+ E AK A
Sbjct: 236 RLYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQ 295
Query: 383 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 442
LNG LE+ GR +KV VT+ GT + A S F + D +L+RTGI
Sbjct: 296 LNG-LELAGRPMKVGHVTE--GTDASTASS--FLNSD----------------ELERTGI 334
Query: 443 ATSIAGSLG-VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI------- 494
AG L +A G+ + +P Q A+ + +P+ AEF
Sbjct: 335 DLGTAGGLQFMARLAEGT-----GLQIPPAAQQAL---QMNSPLAFGATAEFSFRLDLLT 386
Query: 495 ------------------GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVK 536
++C L NMF+P E + +D EI+ DV EEC+K+G V
Sbjct: 387 RLSQQTQASDLAAAASVQPLATQCFQLSNMFNPQTE-EVGWDTEIKDDVIEECNKHGGVI 445
Query: 537 HIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 446 HIYVDKNSAQGNVYVKCPSIAAAVAAVSALHGRWFAGKMITAAYVPLPTYHNLF 499
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 254 bits (649), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 249/489 (50%), Gaps = 100/489 (20%)
Query: 107 RDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRER 166
+D+ + R R + + +R++ +++ERER E RS SR
Sbjct: 126 KDKVKERSRERERSRDQHPPKREKSRDKERERS-EYRSKSRG------------------ 166
Query: 167 ERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAY 226
E +L+ +L ERDL RTVF
Sbjct: 167 -----IEPKLD---------DLPPEERDL-------------------------RTVFCM 187
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + +D+ EFFS GKVRDVRLI +RR KG+ YIEF D SVP+A+ L+GQ L
Sbjct: 188 QLSQRIRAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFKDAESVPLALGLTGQKL 247
Query: 287 LGQPVMVKPSEAEKNLVQSNTS--AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ ++AEKN V + A T+ GP +LYVG+LHFN+TE LR +FEP
Sbjct: 248 LGVPIIVQHTQAEKNRVGNTLPNLAPKTSNGP-----TRLYVGSLHFNITEDMLRGIFEP 302
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG ++ +QL D +TG+ KG+GF+ F AK A LNG E+ GR +KV +VT+
Sbjct: 303 FGKIDHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQLNG-FELAGRPMKVGNVTE--- 358
Query: 405 TQDTAAKSADFDDD--DGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAV 461
+ S FD D D G+ L A R LM KL + TG L + PA ++V
Sbjct: 359 -RADGGSSTRFDADELDRAGVDLGATGRLQLMFKLAEGTG--------LQIPPA--AASV 407
Query: 462 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 521
A S V QP V P T +C +L NMFDP+ E++P +D+EI
Sbjct: 408 LMGAGSTLVAPQPQVAPPIAT----------------QCFMLNNMFDPSSESNPSWDIEI 451
Query: 522 QGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
+ DV EC+K+G V H+YVDK S G VY + + A ++ ++H RWFA R+I+A ++
Sbjct: 452 RDDVISECNKHGGVLHVYVDKASPQGNVYCKCPTIATAVASVNSLHGRWFAGRVITAAYV 511
Query: 581 KPEDYEAKF 589
+Y + F
Sbjct: 512 PLVNYHSLF 520
>gi|260834973|ref|XP_002612484.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
gi|229297861|gb|EEN68493.1| hypothetical protein BRAFLDRAFT_214383 [Branchiostoma floridae]
Length = 466
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 225/433 (51%), Gaps = 75/433 (17%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
P+ PE RDQRTVF Q+ + +D+ +FFS GKVR+VRLI DRNSRR KG+ Y EF
Sbjct: 37 PQLSPEERDQRTVFVMQLSQRVRPKDLEDFFSSVGKVREVRLIADRNSRRHKGIAYCEFT 96
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKLYVGNL 329
D VPMAI L+ Q LLG P++V+ S+AEKN +N+ + ++GP +LYVG+L
Sbjct: 97 DASCVPMAIGLTNQKLLGVPIIVQASQAEKNRAAANSQNLQKGSSGP-----MRLYVGSL 151
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
HFN+TE LR +FEPFG ++ +QL D ETG+ KG+GF+ F E AK A LNG E+
Sbjct: 152 HFNITEDMLRGIFEPFGKIDNIQLMKDSETGRSKGYGFITFHDAECAKKALEQLNG-FEL 210
Query: 390 VGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSI 446
GR +KV VT+ D A ++ D D+ G+ L+ R LM KL + TG
Sbjct: 211 AGRPMKVGHVTER---SDAGAATSFLDSDELERTGIELSTTGRLQLMAKLAEGTGFEM-- 265
Query: 447 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVP--VPAVTAPV----------IPNMAAEFI 494
PA SA+N SL G P +P P V AP P
Sbjct: 266 -------PAAAQSALNMPMASL--TGLPTLPGAGPGVAAPAGVMPAAGQQQPPPPPVPIP 316
Query: 495 GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS---------- 544
+ C L NMFD ME P++D+EI+ DV EEC+K+G V H++VDK S
Sbjct: 317 AYATPCFQLSNMFDIKMENAPNWDMEIRNDVVEECTKHGGVLHVFVDKNSDNVSHDTHSH 376
Query: 545 ----------------------------AGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
G VY++ + + AA+ A+H RWFA ++I
Sbjct: 377 FVFLSLYQQMGQMPEFTAQSFHHTLFCLQGNVYVKCPNIQTAAACVNALHGRWFAGKMIQ 436
Query: 577 AIFMKPEDYEAKF 589
A ++ +Y A F
Sbjct: 437 ANYVPIVNYHALF 449
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/376 (40%), Positives = 208/376 (55%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVRLI ++R KG+ YIEF D SV
Sbjct: 238 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVA 297
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +QS TGP +LYVG+LHFN+T
Sbjct: 298 LALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM-----RLYVGSLHFNIT 352
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++++QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 353 EDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRPM 411
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 412 KVGNVTERL---DMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGA------------- 455
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
G AV Q A + + P FI L NMFDP ET+
Sbjct: 456 ---GLAVPQAAANALLATAPQPAPLQQQQQTPSIATQCFI--------LSNMFDPRTETN 504
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARR 573
P +D +++ DV +EC+K+G V HI+VD S G VY++ ST A A A+H RWFA R
Sbjct: 505 PTWDTDVREDVLDECAKHGGVLHIHVDTVSPTGTVYVKCPSTTTAVLAVNALHGRWFAGR 564
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 565 VITAAYVPVINYHSMF 580
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 212/376 (56%), Gaps = 36/376 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I ++R KG+ YIEF D SV
Sbjct: 251 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFEDPESVS 310
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+A+ LSGQ LLG P+MV+ ++AEKN +Q+ A + TGP +LYVG+LHFN+T
Sbjct: 311 LALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPM-----RLYVGSLHFNIT 365
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++++QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +
Sbjct: 366 EDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRPM 424
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
KV +VT+ + D S D D+ D G+ L A R LM KL L V
Sbjct: 425 KVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAE-------GAGLAVPQ 474
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
A + + PV Q P A + L NMFDPA ET+
Sbjct: 475 AAANALLATAPQPAPVQQQQQTPSIATQCFI-----------------LSNMFDPATETN 517
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 573
+D EI+ DV EEC+K+G V HI+VD S+ G VY++ ST A A A+H RWFA R
Sbjct: 518 TTWDSEIRDDVLEECAKHGGVLHIHVDTASSTGTVYVKCPSTTTAVLAVNALHGRWFAGR 577
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ +Y + F
Sbjct: 578 VITAAYVPLINYHSMF 593
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 273/515 (53%), Gaps = 80/515 (15%)
Query: 106 ERDRERSRERREKEKERERRE-RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRR 164
+R +SR R ++ K R+E +R R++ER+R R ER+ S R S+SR R R
Sbjct: 7 KRGESKSRSRTDEPKRSRRKEGKRSRDRERKRSRSPERKRSRSKERRRSRSRSRDGRFRG 66
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRR-YKEKKEVVEPEADPERDQRTV 223
R + ++R + L +R+ + +E + + PE ERD RTV
Sbjct: 67 RYTSPYSRPK---------FNSDIRG-QTGLPLRKDKSPVREPIDNLTPE---ERDARTV 113
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG 283
F Q+ + RD+ FFS GKVRDVR+I DRN+RRSKG+ Y+EF DV SVP+AI L+G
Sbjct: 114 FCMQLAARIRPRDLEAFFSTVGKVRDVRMISDRNARRSKGIAYVEFVDVSSVPLAIGLTG 173
Query: 284 QLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 341
Q + G P++V+ S+AEKN +N G A GP +LYVG+LH N+TE LR +
Sbjct: 174 QRVFGVPILVRASQAEKNRAAAMANNLQKGRA-GPM-----RLYVGSLHLNITEAMLRGI 227
Query: 342 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 401
FEPFG +E +QL D ETG+ KG+GF+ F+ E AK A LNG LE+ GR +KV VT+
Sbjct: 228 FEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQLNG-LELAGRPMKVGHVTE 286
Query: 402 HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL-GVAPAVNGSA 460
GT + A S F + D +L+RTGI AG L +A G+
Sbjct: 287 --GTDASTASS--FLNSD----------------ELERTGIDLGTAGGLQFMARLAEGT- 325
Query: 461 VNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF------------------IGS------ 496
+ +P Q A+ + +P+ AEF + +
Sbjct: 326 ----GLQIPPAAQQAL---QMNSPLAFGATAEFSFRLDLLTRLSQQTQASDLAAAASVQP 378
Query: 497 -PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFES 554
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 379 LATQCFQLSNMFNPQTE-EVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS 437
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 438 IAAAVAAVSALHGRWFAGKMITAAYVPLPTYHNLF 472
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 220/379 (58%), Gaps = 38/379 (10%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GP-----MRLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTE--- 171
Query: 405 TQDTAAKSADFDDDDG---GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGV 452
+ A+ ++ F D DG G+ L R LM +L + TG+ A ++GSL
Sbjct: 172 -RTDASSASSFLDSDGLERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAF 230
Query: 453 APAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
S V I L + Q A + +A ++C L NMF+P
Sbjct: 231 GAVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQT 279
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWF 570
E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWF
Sbjct: 280 EEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWF 339
Query: 571 ARRLISAIFMKPEDYEAKF 589
A ++I+A ++ Y F
Sbjct: 340 AGKMITAAYVPLPTYHNLF 358
>gi|195996811|ref|XP_002108274.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
gi|190589050|gb|EDV29072.1| hypothetical protein TRIADDRAFT_37071 [Trichoplax adhaerens]
Length = 351
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 214/358 (59%), Gaps = 34/358 (9%)
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK 294
R + E FS G++RD+R+I DRNSRRSKG+ Y+EF V SV A+ L+G + G P+M++
Sbjct: 10 RQLEELFSPVGEMRDIRVIADRNSRRSKGIAYVEFRLVDSVDKALKLNGTKVEGIPIMIQ 69
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+++EKN + + + GP +LY+G+LH+N+ E LR +FEPFG VE V +
Sbjct: 70 RTQSEKNKIAALQAQQKAQQGP-----TRLYIGSLHYNINEDMLRAIFEPFGLVENVNII 124
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 414
D +T KG+GF+Q+ + + A+ A LNG LE+ GR +KV +VTD + D +A SA
Sbjct: 125 RDSDTNVSKGYGFIQYKEPDSARRALEQLNG-LEVAGRPIKVGTVTDR--SADLSAMSA- 180
Query: 415 FDDDDG--GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 472
DDDD GG+ +N+ SR LM KL +T AT++ S V +LP G
Sbjct: 181 LDDDDTERGGIEMNSLSRVALMAKLSQTHNATTVPVS-------VPVPVPVPGPTLPATG 233
Query: 473 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 532
+IP AA + + S C L+ NMFDPA ETD D+DL+I+ D+ EEC+K+
Sbjct: 234 ------------LIP--AANTVQA-SPCFLISNMFDPAKETDQDWDLDIRDDIIEECNKH 278
Query: 533 GRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G V H+YVDK S G VY++ ++ + AA A ++++ RWFA +I+A F+ Y F
Sbjct: 279 GNVYHVYVDKTSPKGIVYVKCQTIDVAARAVKSLNGRWFAGNMITAQFLSLASYHTTF 336
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 217/380 (57%), Gaps = 39/380 (10%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVI 486
L + TG+ A ++GSL S V I L + Q A +
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV----IDLQTRLSQQTEASALAAAASV 418
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA- 545
+A ++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA
Sbjct: 419 QPLA-------TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQ 471
Query: 546 GFVYLRFESTEAAASAQRAM 565
G VY++ S AA + +
Sbjct: 472 GNVYVKCPSIAAAHCCCQCI 491
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 215/369 (58%), Gaps = 24/369 (6%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELTGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAV 461
D ++ S+ D D+ G+ L R LM +L + TG L + PA +
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQ 223
Query: 462 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 521
+++ V + T AA ++C L NMF+P E + +D EI
Sbjct: 224 MSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEI 283
Query: 522 QGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++
Sbjct: 284 KDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYV 343
Query: 581 KPEDYEAKF 589
Y F
Sbjct: 344 PLPTYHNLF 352
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 215/369 (58%), Gaps = 24/369 (6%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAV 461
D ++ S+ D D+ G+ L R LM +L + TG L + PA +
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQ 223
Query: 462 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 521
+++ V + T AA ++C L NMF+P E + +D EI
Sbjct: 224 MSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEI 283
Query: 522 QGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++
Sbjct: 284 KDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYV 343
Query: 581 KPEDYEAKF 589
Y F
Sbjct: 344 PLPTYHNLF 352
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 209/368 (56%), Gaps = 38/368 (10%)
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK 294
RD+ +FFS GKVRDVR+I DR+SRRSKG+ YIEF + SVP+AI L+GQ LLG P++V+
Sbjct: 142 RDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQ 201
Query: 295 PSEAEKN---------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 345
S+AEKN +N G GP +LYVG+LHFN+TE LR +FEPF
Sbjct: 202 ASQAEKNRAAAAAAAAAAANNLQKG--MMGPL-----RLYVGSLHFNITEEMLRGIFEPF 254
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 405
G +E +QL +D +TG+ KG+GF+ FA E AK A LNG E+ GR +KV VTD +
Sbjct: 255 GRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQLNG-FELAGRPMKVGHVTDR--S 311
Query: 406 QDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQ 464
A D ++ + G L + R LM +L + TG L + P+ +
Sbjct: 312 DAVAPPFPDGEEQERAGADLGSTGRLQLMAQLSEGTG--------LPMPPSAQQALQMSG 363
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQ 522
AI+L + AV+A + P + P + C L NMF P E P ++L+IQ
Sbjct: 364 AIALGAMA-------AVSAAMNPGLNMSIPSQPLATHCFQLSNMFSPNSELPPGWELDIQ 416
Query: 523 GDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMK 581
+V EEC+K+G V HIYVDK SA G VY++ + AA +A +H R+F +LI+A ++
Sbjct: 417 HNVIEECNKHGGVVHIYVDKDSAEGNVYIKCPTIPAAMAAVNVLHGRFFNGKLITAAYVP 476
Query: 582 PEDYEAKF 589
Y F
Sbjct: 477 LPTYHNLF 484
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 219/378 (57%), Gaps = 36/378 (9%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GP-----MRLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELTGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVA 453
D ++ S+ D D+ G+ L R LM +L + TG+ A ++GSL
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFG 231
Query: 454 PAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
S V I L + Q A + +A ++C L NMF+P E
Sbjct: 232 AVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQTE 280
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFA 571
+ +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA
Sbjct: 281 EEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 340
Query: 572 RRLISAIFMKPEDYEAKF 589
++I+A ++ Y F
Sbjct: 341 GKMITAAYVPLPTYHNLF 358
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 219/378 (57%), Gaps = 36/378 (9%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GP-----MRLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVA 453
D ++ S+ D D+ G+ L R LM +L + TG+ A ++GSL
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFG 231
Query: 454 PAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
S V I L + Q A + +A ++C L NMF+P E
Sbjct: 232 AVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQTE 280
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFA 571
+ +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA
Sbjct: 281 EEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 340
Query: 572 RRLISAIFMKPEDYEAKF 589
++I+A ++ Y F
Sbjct: 341 GKMITAAYVPLPTYHNLF 358
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 227/407 (55%), Gaps = 26/407 (6%)
Query: 197 MRESRRYKEKKEVVEPEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
M + RY + V+ E PE RD RTVF Q+ RD+ EFFS+ KVRDVR+I D
Sbjct: 204 MPFTPRYSPPRNYVDSELSPEERDARTVFCMQLARSIRPRDLEEFFSEVAKVRDVRIITD 263
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT- 314
+RRSKG+ Y+EF+D+ SVP+A++L G+ LLG P++V+P+++EKN + S A
Sbjct: 264 SKTRRSKGIAYVEFWDLDSVPLALSLHGKRLLGAPIVVQPTQSEKNRMASAMLATAFTQN 323
Query: 315 -GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP KLYVG+LHFN+TE LR +FEPFG +E +QL D ET + +G+GF+ F
Sbjct: 324 RGPM-----KLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNS 378
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK-SADFDDDDGGGLALNAQSRAL 432
E AK A LNG E+ GR +KV VT+H Q+T + S D D+ D G+ L R
Sbjct: 379 EDAKRAMEQLNG-FELAGRPMKVGHVTEH---QNTLFQPSLDSDELDRSGIDLGTTGRLQ 434
Query: 433 LMQKL-DRTGI-ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
LM KL + TG+ +A + +N Q P +
Sbjct: 435 LMAKLAEGTGMELPQVAKQM-----LNAQPQQHQHTLPPAMQVQQQQQQQQQQHEQQQQL 489
Query: 491 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 549
A ++C +L NMF+P E+DPD+D EI+ DV +EC+K+ V HI+VDK S G VY
Sbjct: 490 ASQQLIATQCFVLSNMFNPMAESDPDWDREIRDDVIDECNKHQGVVHIFVDKASGDGNVY 549
Query: 550 LRFESTEAAASAQRAMHMRWFARRLISA-----IFMKPEDYEAKFKS 591
++ + AA +A ++H R+FA + + + + M + Y K +S
Sbjct: 550 VKCPTVAAAVAAVNSLHGRYFAGKCVVSRCLLQLCMMLQCYNGKLRS 596
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 244 bits (624), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 219/378 (57%), Gaps = 36/378 (9%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIVVQASQAEKNRAAAMANNLQKGSA-GP-----MRLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVA 453
D ++ S+ D D+ G+ L R LM +L + TG+ A ++GSL
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFG 231
Query: 454 PAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
S V I L + Q A + +A ++C L NMF+P E
Sbjct: 232 AVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQTE 280
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFA 571
+ +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA
Sbjct: 281 EEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 340
Query: 572 RRLISAIFMKPEDYEAKF 589
++I+A ++ Y F
Sbjct: 341 GKMITAAYVPLPTYHNLF 358
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 217/378 (57%), Gaps = 38/378 (10%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR KG+ Y+EF D SV
Sbjct: 7 ERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVT 66
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLV---QSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
+A+ LSGQ LLG P++V+ ++AEKN + N G TGP +LYVG+LHFN+
Sbjct: 67 LALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ-TGP-----MRLYVGSLHFNI 120
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG E+ GR
Sbjct: 121 TEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRP 179
Query: 394 LKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGV 452
+KV +VT+ D D+ D G+ L A R LM KL + TG+
Sbjct: 180 MKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEI-------- 230
Query: 453 APAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
P +A+N P +TAP P AA I ++C +L NMFDP E
Sbjct: 231 -PPAAANALNM--------------APVMTAPQPPPQAAPPIA--TQCFMLSNMFDPQNE 273
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFA 571
T+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A ++H RWFA
Sbjct: 274 TNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWFA 333
Query: 572 RRLISAIFMKPEDYEAKF 589
R+I+A ++ +Y + F
Sbjct: 334 GRVITAAYVPVVNYHSLF 351
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 214/380 (56%), Gaps = 42/380 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKV+DVRLI +RR KG+ Y+EF D SV
Sbjct: 167 ERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVT 226
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLV---QSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
+A+ LSGQ LLG P++V+ ++AEKN + N G TGP +LYVG+LHFN+
Sbjct: 227 LALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ-TGPM-----RLYVGSLHFNI 280
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG E+ GR
Sbjct: 281 TEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRP 339
Query: 394 LKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSL 450
+KV +VT+ D D+ D G+ L A R LM KL + TG I + A +L
Sbjct: 340 MKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 398
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
+AP ++ QA ++C +L NMFDP
Sbjct: 399 NMAPVMSTPQPPPQAAPP---------------------------IATQCFMLSNMFDPQ 431
Query: 511 METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRW 569
ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A ++H RW
Sbjct: 432 NETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRW 491
Query: 570 FARRLISAIFMKPEDYEAKF 589
FA R+I+A ++ +Y + F
Sbjct: 492 FAGRVITAAYVPVVNYHSLF 511
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 214/380 (56%), Gaps = 42/380 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKV+DVRLI +RR KG+ Y+EF D SV
Sbjct: 144 ERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVT 203
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLV---QSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
+A+ LSGQ LLG P++V+ ++AEKN + N G TGP +LYVG+LHFN+
Sbjct: 204 LALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ-TGPM-----RLYVGSLHFNI 257
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG E+ GR
Sbjct: 258 TEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRP 316
Query: 394 LKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSL 450
+KV +VT+ D D+ D G+ L A R LM KL + TG I + A +L
Sbjct: 317 MKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANAL 375
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
+AP ++ QA ++C +L NMFDP
Sbjct: 376 NMAPVMSTPQPPPQAAPP---------------------------IATQCFMLSNMFDPQ 408
Query: 511 METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRW 569
ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A ++H RW
Sbjct: 409 NETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRW 468
Query: 570 FARRLISAIFMKPEDYEAKF 589
FA R+I+A ++ +Y + F
Sbjct: 469 FAGRVITAAYVPVVNYHSLF 488
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 225/397 (56%), Gaps = 65/397 (16%)
Query: 198 RESRRYKEKKE---VVEPEADPERDQRTVFAYQMPLKATERDVYEFF-SKAG--KVRDVR 251
RES Y E + EP+ D + + R+VF Q+ + T RD+ FF K G V DVR
Sbjct: 110 RESPSYDEAPSDPYMDEPKED-DSEARSVFVSQLAARMTARDLGYFFEDKLGDNSVLDVR 168
Query: 252 LIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG- 310
++ DR SRRSKG+ Y+EF + V AI+L+G +++G P+M++ +EAE+N T AG
Sbjct: 169 IVTDRISRRSKGIAYVEFGSIELVDKAISLTGTIVMGLPIMIQHTEAERN----KTHAGD 224
Query: 311 GTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 368
G+ P GA R LYVG+LHFN+TE+ ++++FEPFG ++ V L D TG+ KG+ F+
Sbjct: 225 GSINLPPGASGRGATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATGRSKGYAFI 284
Query: 369 QFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH----VGTQDTAAKSADFDDDDGGGLA 424
+ + E AK A + G E+ GRTL+V++V + + TQD+ D+ GG
Sbjct: 285 HYKRAEDAKMALEQMEG-FELAGRTLRVNTVHEKGQTRISTQDSL--------DESGGGN 335
Query: 425 LNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAP 484
LNA SR LMQKL R ++ + V QQ I P V QP
Sbjct: 336 LNAASRQALMQKLAR----------------IDSAPVTQQPIMKPTVAQPMT-------- 371
Query: 485 VIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKR 543
S+ +L++NMFDP ET+P +D ++ DV+ EC +KYGRV+HI V+K
Sbjct: 372 -------------SKSVLMRNMFDPEEETEPAWDKDLAEDVKTECQAKYGRVQHIKVEKD 418
Query: 544 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
S G +Y++F++ +AA +A ++ RWF + ISA F+
Sbjct: 419 SEGEIYVQFDTVDAAKAAINGLNGRWFGGKQISATFI 455
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 212/377 (56%), Gaps = 52/377 (13%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 259 EPRED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYV 317
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKL 324
EF V V A+ LSG +++G P+ ++ +EAE+N + N + + P+G + +L
Sbjct: 318 EFRSVELVDKALGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGM--QL 375
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 376 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQME 435
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
G E+ GRTL+V++V + T+ S D+ GG LNA SR LMQKL RT
Sbjct: 436 G-FELAGRTLRVNTVHEKGTTKYAQQDSL----DEAGGGNLNAASRQALMQKLART---- 486
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
QPAV +P VT P IP S +LLK
Sbjct: 487 ---------------------------DQPAVKLPPVTKPNIPQSMQ------SRSVLLK 513
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMF+P ET+ D+D ++ DV+ EC KYG+V+ I V++ S G +Y++F+S E+A +A +
Sbjct: 514 NMFNPEEETERDWDKDLAEDVKGECEDKYGKVEFIKVERESQGEIYVKFDSIESAKNAIQ 573
Query: 564 AMHMRWFARRLISAIFM 580
+H RWF +SA F+
Sbjct: 574 GLHGRWFGGNQVSAAFI 590
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 216/388 (55%), Gaps = 21/388 (5%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RTVF + K ER +++FFSK GKV DVR+I DRN+ +SKG+ Y+EF D +
Sbjct: 131 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKKFIH 190
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLV----QSNTSAGGTATG---PY--GAIDRKLYVG 327
A+ L+GQ L GQ + VK SEAEKN+ Q+ G + G PY A KL VG
Sbjct: 191 PALELTGQELNGQAIAVKTSEAEKNIAWEAEQAQKKKLGASYGQGVPYIASAGPCKLRVG 250
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG--FVQFAQLEHAKAAQSALNG 385
LH ++E ++ +FEPFG ++ + + D + G F FVQF +HA A S LNG
Sbjct: 251 GLHLGLSEDDVKAVFEPFGELDFISMIKDDDPGAAGKFASAFVQFKLTQHAMLALSQLNG 310
Query: 386 KLEIVGRTLKVSSVTDHV----GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 441
LE+VG ++VS + V T +S D+ GGL ++++ RA LM +L G
Sbjct: 311 -LELVGIPIRVSIASQGVQAAASTMAAPVESLGELDEGSGGLRMDSRGRAALMARL--AG 367
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 501
I + P+ + + A ++ + P +P P+ + P+ C+
Sbjct: 368 QDKEIEKGFTIDPS---TGLPTTADAVKPIDVPGEALPLAAQPITQGVLGPGSPIPTPCI 424
Query: 502 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 561
LLKN+F+ A ETDP++ L+I DV+ EC K+G + H +VDK S GFVYL+F T ++ A
Sbjct: 425 LLKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHAFVDKDSQGFVYLKFVDTASSTRA 484
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKF 589
Q+A+H RWFA R I+A F E Y+ F
Sbjct: 485 QQALHARWFAGRKIAAEFQFAEVYDGHF 512
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 213/379 (56%), Gaps = 35/379 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 246 ERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 305
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLY+G LH ++TE
Sbjct: 306 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPTNTTGPLKLYIGQLHTSITE 365
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
LR++FEPFG ++ +++ D+ +G KG+ +V F + AK A +NG E+ GR +K
Sbjct: 366 DMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDAKRAMEQMNG-FELAGRPMK 423
Query: 396 VSSV-TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLG 451
V +V D V +Q ++ D D+ D G+ L R LM KL + +G + S L
Sbjct: 424 VGTVDGDEVPSQ--PQRTLDTDEADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKDMLA 481
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
+ Q +++P + ++C LL NMFDPA
Sbjct: 482 QNQQQQQQTDSSQNLAIPPIA-------------------------TQCFLLSNMFDPAQ 516
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWF 570
ET ++ E++ DV EEC+K G V HI+VD+ S +G VY++ S AA + ++H RWF
Sbjct: 517 ETGENWADEVRDDVIEECAKNGGVVHIFVDRESPSGNVYVKCPSVAAAYKSVNSLHGRWF 576
Query: 571 ARRLISAIFMKPEDYEAKF 589
+ ++I+A ++ Y F
Sbjct: 577 SGKVITANYIPVASYSQLF 595
>gi|412993528|emb|CCO14039.1| predicted protein [Bathycoccus prasinos]
Length = 641
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 212/413 (51%), Gaps = 57/413 (13%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RT FAY + K+ ERD+++FF KAG+V DVR+I DRN SKG+ Y+EF D S+P
Sbjct: 246 DRDTRTCFAYNLSTKSDERDIFKFFMKAGEVTDVRIIYDRNRPISKGMAYVEFQDKSSIP 305
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRK-------LYVG 327
A+ L+G+ L GQ VMVK SEAEKN+ A G T G G D L+V
Sbjct: 306 KALELTGETLRGQKVMVKHSEAEKNIAWEAEQAAKGVTGKGKRGNGDGTQQSGPCALFVA 365
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
LH + E ++ +FEPFG ++ +++ D GQ G G VQ+ + HA A S LNG L
Sbjct: 366 GLHEGLAEEDVKAVFEPFGALDAIEISRD-GNGQSNGHGIVQYREWSHAMLAVSQLNG-L 423
Query: 388 EIVGRTLKVSSVTDHVGTQDTAAKSADFD-------------------------DDDGGG 422
E+VG+ LK+S G ++ + DD
Sbjct: 424 ELVGQALKISVAAGQGGAKNDNKNRNNDRSGGGDVGGGGGGGEEDDDDRVGGQMDDTATY 483
Query: 423 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 482
++A RA LMQKL G AT+I A+ + + A+ + + + +T
Sbjct: 484 AKMDAAKRAELMQKL-AGGDATTIG-------AIPTATLTHNAVKIKTKEEEKRELIMMT 535
Query: 483 ----APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 538
P P P++C+LLKN+FDPA ETD ++ L+I+ DV+ E SKYG H
Sbjct: 536 QGFFGPSSP--------IPTKCVLLKNLFDPAEETDEEWWLDIEEDVKGEVSKYGECVHA 587
Query: 539 YVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
+VDK + GF YL+F+ EAA AQ ++ RWFA R I F E Y FK
Sbjct: 588 HVDKENPYGFCYLKFDDVEAAKKAQFGLNNRWFAGRSIICDFQFVEPYNKHFK 640
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 208/375 (55%), Gaps = 27/375 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 94 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 153
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE
Sbjct: 154 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITE 213
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L ++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +K
Sbjct: 214 DMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMK 271
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 455
V SV ++ D DD D G+ L R LM KL G + S A
Sbjct: 272 VCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----A 325
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 515
A NQQ + VT P IP +A ++C +L NMFDP+ ET
Sbjct: 326 KEILAQNQQQLE----------SATVTGPAIPPIA-------TQCFMLSNMFDPSQETGE 368
Query: 516 DFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRL 574
+ E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++
Sbjct: 369 TWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKV 428
Query: 575 ISAIFMKPEDYEAKF 589
I+A ++ Y F
Sbjct: 429 ITANYVPVASYSQLF 443
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 224/383 (58%), Gaps = 41/383 (10%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RT+F Q+ + RD+ EFFS GKVR+V+LI D++S+RSKG+ Y+EF D+ S+P
Sbjct: 100 DRDARTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIP 159
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
+A+ LSGQ LLG P++V+P+++EKN + + S A GP KLYVG+LH N+TE
Sbjct: 160 LALGLSGQKLLGVPIVVQPTQSEKNKIAAAQLSLQKAALGP-----TKLYVGSLHENITE 214
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
++ +F PFG VE VQ+ D + G +G+GF+ FA+ E AK A LNG EI G+ +K
Sbjct: 215 EMIKGIFSPFGRVEQVQIIKD-DAGASRGYGFITFAEAECAKRALDQLNG-FEIAGKPIK 272
Query: 396 VSSV---TDHVGTQDTAAKSADFDDD--DGGGLALNAQSRALLMQKL-DRTGIATSIAGS 449
+++V TD Q A+ + D+D + G+ L R LM KL + TG+ A
Sbjct: 273 LNTVSYGTDMNAMQGLASGPSFLDNDAVERAGIDLGTTGRLQLMAKLAEGTGLEVPSAA- 331
Query: 450 LGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP---SECLLLKNM 506
QQA+ L GQ +P AA G+P + C L NM
Sbjct: 332 -------------QQALYL---GQS-------MGLGLPQSAAGTTGAPPIATTCFQLSNM 368
Query: 507 FDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMH 566
FDP ET +D EI+ DV EEC ++G V H++VDK+S G VY++ +S AAA++ A+H
Sbjct: 369 FDPLNETGSSWDKEIRDDVIEECQRHGAVYHVFVDKQSKGNVYVKCDSVSAAANSVAALH 428
Query: 567 MRWFARRLISAIFMKPEDYEAKF 589
R+FA +I+A ++ +Y + F
Sbjct: 429 GRYFAGNMITAAYVPVVNYHSLF 451
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 207/375 (55%), Gaps = 27/375 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 149 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 208
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE
Sbjct: 209 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITE 268
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L ++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +K
Sbjct: 269 DMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMK 326
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 455
V SV ++ D DD D G+ L R LM KL G + S A
Sbjct: 327 VCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----A 380
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 515
A NQQ + T P IP +A ++C +L NMFDP+ ET
Sbjct: 381 KEILAQNQQQLE----------SATATGPAIPPIA-------TQCFMLSNMFDPSQETGE 423
Query: 516 DFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRL 574
+ E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++
Sbjct: 424 TWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKV 483
Query: 575 ISAIFMKPEDYEAKF 589
I+A ++ Y F
Sbjct: 484 ITANYVPVASYSQLF 498
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 213/379 (56%), Gaps = 35/379 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 163 ERDQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 222
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLY+G LH ++TE
Sbjct: 223 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGSLGFGPTNTTGPLKLYIGQLHTSITE 282
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
LR++FEPFG ++ +++ D+ +G KG+ +V F + AK A +NG E+ GR +K
Sbjct: 283 DMLRRIFEPFGKIDTLEIATDL-SGVSKGYAYVTFRHADDAKRAMEQMNG-FELAGRPMK 340
Query: 396 VSSV-TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLG 451
V +V D V +Q ++ D D+ D G+ L R LM KL + +G + S L
Sbjct: 341 VGTVDGDEVPSQ--PQRTLDTDEADRRGIDLGTSGRLHLMAKLAEGSGLELPKSAKDMLA 398
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
+ Q +++P + ++C LL NMFDPA
Sbjct: 399 QNQQQQQQTDSSQNLAIPPIA-------------------------TQCFLLSNMFDPAQ 433
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWF 570
ET ++ E++ DV EEC+K G V HI+VD+ S +G VY++ S AA + ++H RWF
Sbjct: 434 ETGENWADEVRDDVIEECAKNGGVVHIFVDRESPSGNVYVKCPSVAAAYKSVNSLHGRWF 493
Query: 571 ARRLISAIFMKPEDYEAKF 589
+ ++I+A ++ Y F
Sbjct: 494 SGKVITANYIPVASYSQLF 512
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 209/377 (55%), Gaps = 53/377 (14%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 224 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 282
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG---PYGAIDRKL 324
EF + V AI LSG +++G P+MV+ +EAE+N + + G P+GAI L
Sbjct: 283 EFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPPGVSAPHGAI---L 339
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FE FG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 340 YVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQME 399
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
G E+ GRTL+V++V + T+ T S D+ GG LNA SR LMQKL RT
Sbjct: 400 G-FELAGRTLRVNTVHEKGTTKYTQQDSL----DESGGGNLNAASRQALMQKLART---- 450
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
QPA V P IP S +LLK
Sbjct: 451 ---------------------------DQPAPRPEPVQRPNIPQAMQ------SRSVLLK 477
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMFDP ET+ D+D E+ DV+ EC SKYG+V I V+K S G +Y++F+S + A A +
Sbjct: 478 NMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDSQGEIYVKFDSIDYAQKAIQ 537
Query: 564 AMHMRWFARRLISAIFM 580
++ RWF R +SA+F+
Sbjct: 538 GLNGRWFGGRQVSAVFI 554
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 209/377 (55%), Gaps = 53/377 (14%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 224 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 282
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG---PYGAIDRKL 324
EF + V AI LSG +++G P+MV+ +EAE+N + + G P+GAI L
Sbjct: 283 EFRTIELVEKAIGLSGTVVMGLPIMVQLTEAERNKTHAGDGSINLPPGVSAPHGAI---L 339
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FE FG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 340 YVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMTGRSKGYAFVQYKRAEDARMALQQME 399
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
G E+ GRTL+V++V + T+ T S D+ GG LNA SR LMQKL RT
Sbjct: 400 G-FELAGRTLRVNTVHEKGTTKYTQQDSL----DESGGGNLNAASRQALMQKLART---- 450
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
QPA V P IP S +LLK
Sbjct: 451 ---------------------------DQPAPRPEPVQRPNIPQAMQ------SRSVLLK 477
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMFDP ET+ D+D E+ DV+ EC SKYG+V I V+K S G +Y++F+S + A A +
Sbjct: 478 NMFDPDEETEKDWDRELAQDVKGECESKYGKVLAIKVEKDSQGEIYVKFDSIDYAQKAIQ 537
Query: 564 AMHMRWFARRLISAIFM 580
++ RWF R +SA+F+
Sbjct: 538 GLNGRWFGGRQVSAVFI 554
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 207/375 (55%), Gaps = 27/375 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 271 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 330
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE
Sbjct: 331 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITE 390
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L ++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +K
Sbjct: 391 DMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMK 448
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 455
V SV ++ D DD D G+ L R LM KL G + S A
Sbjct: 449 VCSVEGDELPPPVPQRTLDTDDADRRGIDLGTSGRLHLMAKLAE-GSGLELPKS-----A 502
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 515
A NQQ + T P IP +A ++C +L NMFDP+ ET
Sbjct: 503 KEILAQNQQQLE----------SATATGPAIPPIA-------TQCFMLSNMFDPSQETGE 545
Query: 516 DFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRL 574
+ E++ DV EEC+K G V HI+VDK S G VY++ S AA + A+H RWF+ ++
Sbjct: 546 TWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNALHGRWFSGKV 605
Query: 575 ISAIFMKPEDYEAKF 589
I+A ++ Y F
Sbjct: 606 ITANYVPVASYSQLF 620
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 219/406 (53%), Gaps = 46/406 (11%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADP---ERDQRTVFAYQMPLKATERDVYEFFSKAG 245
R+R+R+ ++ K P+ +P +RD RT+ Q+ K T RD+ +FF +AG
Sbjct: 119 RDRDRNSPPSVAQPIGSYKRQRSPDLEPPSVDRDNRTIMCMQLSAKVTNRDLEDFFMRAG 178
Query: 246 KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS 305
VRDV +I DR SRRSKG+ Y+EF + SV A++ SGQ + G P+M++P+ AEKN + +
Sbjct: 179 VVRDVHIIADRQSRRSKGIAYVEFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKNRLAA 238
Query: 306 NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGF 365
A GP +KLYVG+LH+N+TE L+ +F PFG VE V + D T +G+
Sbjct: 239 AAENLKKAEGP-----KKLYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGY 293
Query: 366 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD--DDGGGL 423
FV+F + A+ A + LNG E+ GR +KV + GT DT+ + D D D G+
Sbjct: 294 AFVEFRDSDSAERAMANLNG-FELAGRPMKV-----NYGTVDTSLVNIDSLDGEDMDVGV 347
Query: 424 ALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA 483
+ QSR LM KL +A + +S+P V VP P
Sbjct: 348 GMTPQSRVALMHKL---------------------AAGHNADMSIPGV---QVPPPPFAV 383
Query: 484 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR 543
P +P S C ++ NMFDP+ ET D+D EI+ DV EEC K+G + HI+VDK
Sbjct: 384 PTMPTCIT------SCCFVIGNMFDPSKETGSDWDKEIREDVLEECVKFGNIFHIHVDKF 437
Query: 544 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
S G VY++ ++ + A++A + + R +A +I A + Y KF
Sbjct: 438 SQGKVYIKSQTPQTASAAVGSFNGRRYAGNVIHAELVPENTYHLKF 483
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 213/385 (55%), Gaps = 61/385 (15%)
Query: 212 PEADPERDQ--------RTVFAYQMPLKATERDVYEFF-SKAGK--VRDVRLIMDRNSRR 260
P+ DP D+ R+VF Q+ + T RD+ FF K G+ V D R++ DR SRR
Sbjct: 276 PQDDPMNDEPSPDDSEARSVFVSQLAARLTARDLGYFFEDKLGENTVMDSRIVTDRISRR 335
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPY 317
SKG+GY+EF V V AIALSG +++G P+ ++ +EAE+N + N + + P+
Sbjct: 336 SKGIGYVEFRSVELVDKAIALSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPH 395
Query: 318 GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 377
G + +LYVG+LHFN++E+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E AK
Sbjct: 396 GGM--QLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPVTGRSKGYAFVQYKRAEDAK 453
Query: 378 AAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
A ++G E+ GRTL+V++V + + T S D + GG LNA SR LMQKL
Sbjct: 454 MALEQMDG-FELAGRTLRVNTVHEKGSARYTQQDSLD----EAGGGNLNAASRQALMQKL 508
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI-PNMAAEFIGS 496
R P PA P+ PN+
Sbjct: 509 ARID-----------------------------------PTPAKMEPIARPNIPQTMQ-- 531
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFEST 555
S +L+KNMF+P ET+ D+D ++ DV+ EC SKYGRV I V+K S G +Y++FE+
Sbjct: 532 -SRSVLMKNMFNPEEETERDWDKDLAEDVKGECESKYGRVLAIKVEKESQGEIYVKFETV 590
Query: 556 EAAASAQRAMHMRWFARRLISAIFM 580
+AA +A ++ RWF R I+A F+
Sbjct: 591 DAAKNAIEGLNGRWFGGRQITAAFI 615
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 255/522 (48%), Gaps = 102/522 (19%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+R +DREK+R R+RD +R SR R RSR + R R+L+ R
Sbjct: 213 ERDRERDKDREKDRARDRDPKRSHRSRDLDEDRDRHRKRPRSRSRERSKEPRPRDLD-GR 271
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADP------------ERDQRTVFAYQM 228
E ER+R E E + R R + EP P E + R+VF Q+
Sbjct: 272 ESERQRRFEEAEGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQL 331
Query: 229 PLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
+ +R++++FF +AGKVRD RLI DR SRRSKGVGY+EF ++ SV A+AL+G LL
Sbjct: 332 SARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKALALTGTKLL 391
Query: 288 GQPVMVKPSEAEKN-----LVQSNTSAG----------------GTATGPYGAID----R 322
G PVMV+ +EAEKN Q N G A GP G D
Sbjct: 392 GLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVTPKARGP-GPNDPNSYA 450
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+L+FN+T+ +R++F+PFG +E V L D TG+ KG+ FVQF + AK A
Sbjct: 451 RLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEK 510
Query: 383 LNGKLEIVGRTLKV---------------SSVTDHV-----GTQDTAAKSADFDD--DDG 420
+NG ++ GR L+V V + V G TA + F++ +D
Sbjct: 511 MNG-FQLAGRALRVEIKAQPPAALLNATAPGVANPVIVTPSGGNFTAPAPSTFEERLEDP 569
Query: 421 GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 480
G LN SR LM KL RT T+ VPV
Sbjct: 570 IGGNLNQISRVELMHKLARTEQPTN------------------------------VPVTD 599
Query: 481 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIY 539
+ P IP S +LLKNMF+P ET+ +D+E++ DV+ EC KYG V I
Sbjct: 600 MFRPNIPTAT-------SRSVLLKNMFNPEEETEQGWDIELRDDVKGECEEKYGPVLAIA 652
Query: 540 VDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
++K S AG +Y+ F+S +A A ++ RWF R I+A F+
Sbjct: 653 IEKESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFI 694
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 204/378 (53%), Gaps = 55/378 (14%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 245 EPRED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVMDSRIVTDRISRRSKGIGYV 303
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDR----K 323
EF + V AI LSG +++G P+ V+ +EAE+N T AG + P G +
Sbjct: 304 EFRTIELVEKAIGLSGTIVMGLPIQVQHTEAERN----RTHAGDSLHLPPGVSSHHGGMQ 359
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVG+LHFN+TE+ +R++FEPFG +E V L D TG+ KG+ FVQ+ + E AK A +
Sbjct: 360 LYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRGEDAKMALEQM 419
Query: 384 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 443
G E+ GRTL+V++V + + T +S DD GG LNA SR LMQKL RT
Sbjct: 420 EG-FELAGRTLRVNTVHEKGNVRYTPQESL----DDTGGGNLNAASRQALMQKLART--- 471
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
QPA + P IP S+ +LL
Sbjct: 472 ----------------------------DQPAARPQPIMKPNIPQSMQ------SKSVLL 497
Query: 504 KNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
KNMF+P ET+ D+D E+ DV+ E KYG V I V++ S G +Y++F+S E+A A
Sbjct: 498 KNMFNPEEETERDWDKELADDVKNEVEDKYGDVNFIKVERESQGEIYVKFDSIESAKKAI 557
Query: 563 RAMHMRWFARRLISAIFM 580
+H RWF R +SA F+
Sbjct: 558 EGLHGRWFGGRQVSAAFI 575
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 255/522 (48%), Gaps = 102/522 (19%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+R +DREK+R R+RD +R SR R RSR + R R+L+ R
Sbjct: 213 ERDRERDKDREKDRARDRDPKRSHRSRDLDEDRDRHRKRPRSRSRERSKEPRPRDLD-GR 271
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADP------------ERDQRTVFAYQM 228
E ER+R E + + R R + EP P E + R+VF Q+
Sbjct: 272 ESERQRRFEEADGEDRRRRPDRRSPRYRPYEPTGSPPRRSSSPHLTEEEHEMRSVFVSQL 331
Query: 229 PLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
+ +R++++FF +AGKVRD RLI DR SRRSKGVGY+EF ++ SV A+AL+G LL
Sbjct: 332 SARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESVQKALALTGTKLL 391
Query: 288 GQPVMVKPSEAEKN-----LVQSNTSAG----------------GTATGPYGAID----R 322
G PVMV+ +EAEKN Q N G A GP G D
Sbjct: 392 GLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKARGP-GPNDPNSYA 450
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+L+FN+T+ +R++F+PFG +E V L D TG+ KG+ FVQF + AK A
Sbjct: 451 RLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEK 510
Query: 383 LNGKLEIVGRTLKV---------------SSVTDHV-----GTQDTAAKSADFDD--DDG 420
+NG ++ GR L+V V + V G TA + F++ +D
Sbjct: 511 MNG-FQLAGRALRVEIKAQPPAALLNATAPGVANPVIVTPSGGNFTAPAPSTFEERLEDP 569
Query: 421 GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 480
G LN SR LM KL RT T+ VPV
Sbjct: 570 IGGNLNQISRVELMHKLARTEQPTN------------------------------VPVTD 599
Query: 481 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIY 539
+ P IP S +LLKNMF+P ET+ +D+E++ DV+ EC KYG V I
Sbjct: 600 MFRPNIPTAT-------SRSVLLKNMFNPEEETEQGWDIELRDDVKGECEEKYGPVLAIA 652
Query: 540 VDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
++K S AG +Y+ F+S +A A ++ RWF R I+A F+
Sbjct: 653 IEKESTAGDIYITFDSVPSAQKAITGLNNRWFGGRQITAAFI 694
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 209/381 (54%), Gaps = 61/381 (16%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 244 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGYV 302
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKL 324
EF + V AI+LSG +++G PVMV+ +E+E+N + N + + P+GA+ +L
Sbjct: 303 EFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPHGAM--QL 360
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 361 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQME 420
Query: 385 GKLEIVGRTLKVSSV----TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRT 440
G E+ GRTL+V++V T QDT D+ GG LNA SR LMQKL R
Sbjct: 421 G-FELAGRTLRVNTVHEKGTARYAQQDTL--------DEAGGGNLNAASRQALMQKLARI 471
Query: 441 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 500
+P P P IP S
Sbjct: 472 --------------------------------EPIPKPPTNNKPTIPQAMQ------SRS 493
Query: 501 LLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAA 559
+LLKNMFDP ET+ D+D ++ DV+ EC KYG+V I V++ + G +Y++F S ++A
Sbjct: 494 VLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGKIYVKFNSIDSAK 553
Query: 560 SAQRAMHMRWFARRLISAIFM 580
+A + ++ RWF R +SA F+
Sbjct: 554 NAIQGLNGRWFGGRQVSAGFI 574
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 209/381 (54%), Gaps = 61/381 (16%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 244 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGYV 302
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKL 324
EF + V AI+LSG +++G PVMV+ +E+E+N + N + + P+GA+ +L
Sbjct: 303 EFRSIDMVEKAISLSGTVVMGLPVMVQLTESERNKLHPGDGNLNLPPGVSAPHGAM--QL 360
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 361 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDARMALEQME 420
Query: 385 GKLEIVGRTLKVSSV----TDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRT 440
G E+ GRTL+V++V T QDT D+ GG LNA SR LMQKL R
Sbjct: 421 G-FELAGRTLRVNTVHEKGTARYAQQDTL--------DEAGGGNLNAASRQALMQKLARI 471
Query: 441 GIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSEC 500
+P P P IP S
Sbjct: 472 --------------------------------EPIPKPPTNNKPTIPQAMQ------SRS 493
Query: 501 LLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAA 559
+LLKNMFDP ET+ D+D ++ DV+ EC KYG+V I V++ + G +Y++F S ++A
Sbjct: 494 VLLKNMFDPEEETERDWDKDLAEDVKGECEDKYGQVDAIKVEQETQGEIYVKFNSIDSAK 553
Query: 560 SAQRAMHMRWFARRLISAIFM 580
+A + ++ RWF R +SA F+
Sbjct: 554 NAIQGLNGRWFGGRQVSAGFI 574
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 216/380 (56%), Gaps = 59/380 (15%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 109 EPKED-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDSRIVTDRLSRRSKGIGYV 167
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS-----NTSAGGTATGPYGAIDR 322
EF + V A+ALSG +++G P+MV+ +E+E+N + N G TA+ +GAI
Sbjct: 168 EFRTIDHVEKALALSGTVVMGLPIMVQLTESERNKLHPGDGSLNLPPGVTAS--HGAI-- 223
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A
Sbjct: 224 -LYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQ 282
Query: 383 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 442
+ G E+ GRTL+V++V + + TA + D+ GG LNA SR LMQKL RT
Sbjct: 283 MEG-FELAGRTLRVNTVHE----KGTARYTQQDSLDEAGGGNLNAASRQALMQKLART-- 335
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI-PNMAAEFIGSPSECL 501
AP P T PV PN+ S +
Sbjct: 336 ---------EAP------------------------PTFTEPVARPNIPQAM---QSRSV 359
Query: 502 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 560
LLKNMFDP ET+ D+D E+ DV+ EC +KYG+V+ I V++ + G +YL+F+S E+A
Sbjct: 360 LLKNMFDPEEETERDWDKELADDVKVECENKYGKVEAIKVERETQGEIYLKFDSIESAKQ 419
Query: 561 AQRAMHMRWFARRLISAIFM 580
A + ++ RWF R +SA F+
Sbjct: 420 AIQGLNGRWFGGRQVSAAFI 439
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 211/378 (55%), Gaps = 57/378 (15%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP+ D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 243 EPKDD-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARIVTDRLSRRSKGIGYV 301
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP----YGAIDRK 323
EF + V AIALSG +++G P+ V+ +E+E+N +S+ G P GAI
Sbjct: 302 EFRSIDLVEKAIALSGTIVMGLPINVQLTESERN--KSHAGDGSLHLPPGVTASGAI--- 356
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A +
Sbjct: 357 LYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTGRSKGYAFVQYKRAEDARMALEQM 416
Query: 384 NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 443
G E+ GRTL+V++V + + T S D D GG LNA SR LMQKL RT
Sbjct: 417 EG-FELAGRTLRVNTVHEKGSVRYTQTDSLD----DSGGANLNAASRQALMQKLARTE-- 469
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
QP VP V P+IP S +LL
Sbjct: 470 -----------------------------QPVVPAEPVK-PIIPQAMQ------SRSVLL 493
Query: 504 KNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
KNMF+P ET+ ++D ++ DV+ EC +KYG+V I V+K S G +Y++F++ + A SA
Sbjct: 494 KNMFNPEEETEQNWDKDLADDVKGECENKYGKVLAIKVEKDSQGEIYVKFDTVDTAKSAV 553
Query: 563 RAMHMRWFARRLISAIFM 580
+ ++ RWF R ISA F+
Sbjct: 554 QGLNGRWFGGRQISANFI 571
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 212/386 (54%), Gaps = 38/386 (9%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
PE PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSKG+ Y+EF
Sbjct: 94 PELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVEFR 153
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
+V S +A+ L+G LLG P+ ++ S AEKN V + S + G + KLY+G+LH
Sbjct: 154 EVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPM--KLYIGSLH 211
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
+N+TE L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG E+
Sbjct: 212 YNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNG-FELA 270
Query: 391 GRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
GR +KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 271 GRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG---------- 318
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SECLLLK 504
G + + A++ +GQ P++ ++ I P ++C +L
Sbjct: 319 ------TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQCFMLS 364
Query: 505 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQR 563
NMFDP + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A
Sbjct: 365 NMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVN 423
Query: 564 AMHMRWFARRLISAIFMKPEDYEAKF 589
+H R+F+ RLI+A ++ +Y F
Sbjct: 424 MLHGRYFSGRLITAAYVPLINYHQLF 449
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 221/398 (55%), Gaps = 36/398 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ER RT FAY + LKA ERD+Y+ FSK GKV D++LI D+ ++RSKG YIEF V V
Sbjct: 2 ERSTRTAFAYNLNLKADERDIYQLFSKVGKVVDIKLITDKTTKRSKGFAYIEFSKVEEVI 61
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-------SAGGTA---TGPYGAIDRKLYV 326
A+AL+G + +GQ +MVK SE EKNL +T +AG T T P G KLYV
Sbjct: 62 AAVALTGTVFMGQAIMVKSSEHEKNLAWVSTYLASLLGAAGVTGPNDTLPVGPC--KLYV 119
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
NL+ + E +++LF PFG ++ VQL D TG+ +G+G+V +A + A A NG+
Sbjct: 120 ANLNAAIAEADVQQLFAPFGQIDNVQLVRD-ATGRSQGYGYVTYANVLDATKAVEHWNGR 178
Query: 387 LEIVGRTLKVS-----SVTDHVGTQDTA----AKSADFDDDDG-GGLALNAQSRALLMQK 436
+ + G LKVS S G T + + D+++ GGL L + R LM +
Sbjct: 179 V-VAGSALKVSVSSKGSCIRFFGITRTVLLLRCRVGELDEEEARGGLKLTSDRRQALMAR 237
Query: 437 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 496
L + +A +L V P+V AV ++ P + + +V P P
Sbjct: 238 LASSAGLQPVAPALPV-PSVPALAVAPAVLAGPKLDPSLGLIQSVLGPASP--------I 288
Query: 497 PSECLLLKNMFDPAM---ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFE 553
P+ CLL+KNMFDPA E D+ EI DV++ECSKYG V HI+VDK S G VYL+
Sbjct: 289 PTPCLLIKNMFDPAAAQEEMGQDWAEEIAQDVQDECSKYGAVVHIHVDKSSKGCVYLKCG 348
Query: 554 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
S EAA++AQ AM+ RWFA R ++ F Y A FK
Sbjct: 349 SVEAASAAQAAMNGRWFAGRQLAVEFQFLAPYNAHFKC 386
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 212/386 (54%), Gaps = 38/386 (9%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
PE PE RD RTVF +Q+ + +RD+ +FF+ GK+RDVRLIMD ++RSKG+ Y+EF
Sbjct: 94 PELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVEFR 153
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
+V S +A+ L+G LLG P+ ++ S AEKN V + S + G + KLY+G+LH
Sbjct: 154 EVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPM--KLYIGSLH 211
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
+N+TE L+ +FEPFG +E ++L D T + +G+GFV + + AK A LNG E+
Sbjct: 212 YNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNG-FELA 270
Query: 391 GRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
GR +KV+ VT+ ++ + D D+ D G+ L R LM KL
Sbjct: 271 GRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGRLALMAKLAEG---------- 318
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI----PNMAAEFIGSP--SECLLLK 504
G + + A++ +GQ P++ ++ I P ++C +L
Sbjct: 319 ------TGLEIPKAALAQLHIGQ--------NNPILGSAGSVSSSSAIAPPVCTQCFMLS 364
Query: 505 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQR 563
NMFDP + T F+ EI+ DV EEC+K G HI+VD+ SA G VY++ S A
Sbjct: 365 NMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTSAQGNVYVKCPSIAVATQCVN 423
Query: 564 AMHMRWFARRLISAIFMKPEDYEAKF 589
+H R+F+ RLI+A ++ +Y F
Sbjct: 424 MLHGRYFSGRLITAAYVPLINYHQLF 449
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 207/357 (57%), Gaps = 36/357 (10%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SVP+AI L+GQ +
Sbjct: 2 QLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRV 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVG 404
FG +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+
Sbjct: 116 FGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT- 173
Query: 405 TQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVA 453
D ++ S+ D D+ G+ L R LM +L + TG+ A ++GSL
Sbjct: 174 --DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFG 231
Query: 454 PAVNGSAVNQQAISLPV-VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
S V I L + Q A + +A ++C L NMF+P E
Sbjct: 232 AVAEFSFV----IDLQTRLSQQTEASALAAAASVQPLA-------TQCFQLSNMFNPQTE 280
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMR 568
+ +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H R
Sbjct: 281 EEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGR 337
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 218/392 (55%), Gaps = 54/392 (13%)
Query: 198 RESRRYKEKKEVVEPEADPERDQ--RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRL 252
R S Y +++E P+ E D R+VF Q+ + T RD+ FF G V D R+
Sbjct: 5 RASPSYDQQQEDYNPDEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVLDSRI 64
Query: 253 IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSA 309
+ DR SRRSKG+GY+EF + V A+ LSG +++G P+MV+ +E+E+N + N +
Sbjct: 65 VTDRISRRSKGIGYVEFRSIDLVEKALGLSGTVVMGLPIMVQLTESERNRLHPGDGNLNL 124
Query: 310 GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 369
P+GA+ +LYVG+LHFN+TE ++++FEPFG +E V L D TG+ KG+ FVQ
Sbjct: 125 PPGVHAPHGAM--QLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDSTTGRSKGYAFVQ 182
Query: 370 FAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQS 429
+ + E AK A ++G E+ GRTL+V++V + + TA + ++ GG LNA S
Sbjct: 183 YKRPEDAKMALEQMDG-FELAGRTLRVNTVHE----KGTARYTQQDSLEETGGGNLNAAS 237
Query: 430 RALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM 489
R LMQKL R I P +P V+ P IP
Sbjct: 238 RQALMQKLAR--------------------------IETPTPAEP------VSRPSIPQA 265
Query: 490 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFV 548
S +L+KNMFDP ET+ D+D E+ DV+ EC KYG+V+ I V+K + G +
Sbjct: 266 MQ------SRSVLMKNMFDPEEETERDWDKELAEDVKGECQEKYGKVEAIKVEKETQGEI 319
Query: 549 YLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
Y++F + ++A A +A++ RWF R ISA+F+
Sbjct: 320 YVKFATIDSAKEAVQALNGRWFGGRQISAVFI 351
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 206/385 (53%), Gaps = 47/385 (12%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRTVF Q+ + RD+ EFFS G VRDVR+I D +RRSKG+ Y+EF+++ SV
Sbjct: 263 ERDQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVN 322
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+A+AL+GQ LLG P++++P+ AE+N +NT G GP KLYVG LH ++TE
Sbjct: 323 LALALNGQKLLGAPLVIQPTLAERNRAANNTVGGTLGFGPTNTTGPLKLYVGQLHTSITE 382
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L ++F+PFG +E +++ D+ +G KG+ +V F + K A +NG E+ GR +K
Sbjct: 383 DMLGRIFDPFGKIENLEIATDL-SGVSKGYAYVTFRHADDGKRAMEQMNG-FELAGRPMK 440
Query: 396 VSSVTD----------HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 445
V SV + T D + G+ L R LM KL G
Sbjct: 441 VCSVEGDEMPPPVPQRTLDTDDADRR----------GIDLGTSGRLHLMAKLAE-GSGLE 489
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
+ S A A NQQ + VT P IP +A ++C +L N
Sbjct: 490 LPKS-----AKEILAQNQQQLE----------SATVTGPAIPPIA-------TQCFMLSN 527
Query: 506 MFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRA 564
MFDP+ ET + E++ DV EEC+K G V HI+VDK S G VY++ S AA + A
Sbjct: 528 MFDPSQETGETWADEVRDDVIEECAKNGGVLHIFVDKASPNGNVYVKCPSVAAAFKSVNA 587
Query: 565 MHMRWFARRLISAIFMKPEDYEAKF 589
+H RWF+ ++I+A ++ Y F
Sbjct: 588 LHGRWFSGKVITANYVPVASYSQLF 612
>gi|301108451|ref|XP_002903307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097679|gb|EEY55731.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 556
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 230/442 (52%), Gaps = 59/442 (13%)
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 249
ERER + R K++ E++E RD RTVF Q+ K E+D+ F +K GKV +
Sbjct: 118 ERERSTSAERAERAKQR-ELMELT----RDHRTVFVGQLTQKVREKDLERFLTKTGKVEN 172
Query: 250 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQ--PVMVKPSEAEKNL----- 302
V LI D+ + RSKG Y+E ++ VP + L+GQ+ Q P+M+K SEAEKN
Sbjct: 173 VLLIRDKFTNRSKGFAYVELSNLEDVPKVLLLNGQVPDFQVFPIMIKVSEAEKNFAAKKD 232
Query: 303 -VQSNT-------SAGGTATGPYGAID------------RKLYVGNLHFNMTETQLRKLF 342
V + T SA G+ G GAI ++Y GNLH N+TE LR +F
Sbjct: 233 SVMNGTAASGGPLSADGSGAGLAGAISGGGMSASALSAASRIYCGNLHTNITEDDLRIVF 292
Query: 343 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 402
+ FG V V + D E G+ KGF F+QF+ + A A S NG LE+ G L++ V ++
Sbjct: 293 QSFGEVLSVTINRD-EMGRSKGFSFIQFSSPQEANFALSKGNG-LELAGSFLRLGPVNEN 350
Query: 403 VGTQDTAAKSAD---------FDDDDGGGLALNAQSRALLMQKL--DRTGIATSIAGSLG 451
T S D +D++G GL++NAQSR+ LM KL + + S++G +G
Sbjct: 351 AVGNRTGVSSVDNNATGGRWKLEDEEGEGLSMNAQSRSALMAKLAGNDVNLFPSMSG-VG 409
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
A + N A + Q A A+ + + F C ++KNMFD
Sbjct: 410 GYTASTAAYTNSMAAT---AAQRAEQATALMSSSEIEGSESF------CFVVKNMFDVYQ 460
Query: 512 E---TDPDFDLEIQGDVEEECSKYGRVKHIYVDK-RSAGFVYLRFESTEAAASAQRAMHM 567
E +P++ +EIQ DVEEEC +YG V H YV+K + G VY+ F + EAA SA + +H
Sbjct: 461 EQKSGNPEWGVEIQQDVEEECGQYGSVLHTYVEKEKQGGLVYVLFGTVEAAVSAAKKLHG 520
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
RWF +R IS ++ ++Y F
Sbjct: 521 RWFNKRQISVRYLSSQEYVGMF 542
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 211/429 (49%), Gaps = 87/429 (20%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
EP D ERD+RTVF Q+ + R++ EFF +AG V D +++ DR S RSKGVGY+EF
Sbjct: 211 AEP-TDDERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEF 269
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
+ SV AIAL+GQ LLG P++ + +EAEKN NT GTAT G +LYVGN+
Sbjct: 270 KEEESVQKAIALTGQKLLGIPIIAQLTEAEKNRQARNTE--GTATQSNGIPFHRLYVGNI 327
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF AK A +NG E+
Sbjct: 328 HFSITEDDLKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPTQAKEALEKMNG-FEL 385
Query: 390 VGRTLKVSSVTD------------------------------------HVGTQ------- 406
GR ++V D H G
Sbjct: 386 AGRPIRVGLGNDKFTPESTQSLLQRFGGGQANAHAQGSSFSGMGGRGAHAGGTGNFDRTT 445
Query: 407 ----DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 462
D ++ DD D GG+ + SR LM+KL RT +AP
Sbjct: 446 ARDVDKTGGASALDDTDVGGVNFSNYSRDALMRKLARTDEPEQK-----MAPKT------ 494
Query: 463 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
Q + PVV QP + C+LLKNM+D E+DP++ E++
Sbjct: 495 -QQVKKPVVEQPTA---------------------TRCVLLKNMYDQNTESDPNWQDELK 532
Query: 523 GDVEEECS-KYGRVKHIYVD-KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
DV+ EC KYG+V HI + + G +Y++F+ + +A R ++ RWF +I+A ++
Sbjct: 533 DDVKSECDEKYGKVVHIGLALDNNDGEIYIKFDRVQGGENAIRGLNGRWFGGNMITAQYV 592
Query: 581 KPEDYEAKF 589
Y F
Sbjct: 593 VDAVYHMNF 601
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 218/442 (49%), Gaps = 101/442 (22%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RTVFAY +PL+A E+++++FF KAG + D+++I D+ + RSKG YIEF V
Sbjct: 135 DRDTRTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVI 194
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQ-------------------------------- 304
A+AL+GQ+L+GQ VMVK SEAEKNL
Sbjct: 195 NALALTGQVLMGQAVMVKMSEAEKNLAWEAAEQAKRQQKELERELGPGAMAAPLLPPPMP 254
Query: 305 ---------SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+ A A GP +L + NL ++TET LR +FEPFG ++ + L
Sbjct: 255 PGMPGMVGLAMPMAPMVAAGP-----ARLALSNLPTSITETDLRPIFEPFGALDFLTLQR 309
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAA----- 410
D + G GFVQ+ L A A+ L+G L+IVG L V + A
Sbjct: 310 DT-AARPTGNGFVQYRLLSDATKAKENLSG-LDIVGHQLGVGWANVETPVEAVAIAPPPP 367
Query: 411 ----------KSADFDDDDG----GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 456
+ AD D+ GGL L QSRA LM KL A
Sbjct: 368 PLPVAMAAAEQVADQLDEPAEGTGGGLKLTGQSRAALMSKL-----------------AA 410
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAA---EFIGS----PSECLLLKNMF 507
N L V P +P+P V P++P+ A +G P++CLLLKNMF
Sbjct: 411 NAG--------LDVSNVPQIPLPQVAPQQPLVPSALALEQGLLGPASPIPTQCLLLKNMF 462
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
DPA ET ++D EI DV EC KYG V+H++VD+ S GFVY++F + +AA+AQRA+H
Sbjct: 463 DPAEETADNWDAEIAEDVGSECQKYGPVEHVFVDRNSRGFVYVKFTAISSAANAQRALHG 522
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
RWFA R I+A F Y F
Sbjct: 523 RWFAARQIAADFQFTPIYNQHF 544
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 209/377 (55%), Gaps = 52/377 (13%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYI 267
EP D + + R+VF Q+ + T RD+ FF G V D R++ DR SRRSKG+GY+
Sbjct: 4 EPSPD-DSEARSVFVSQLAARLTARDLGYFFEDKLGEGSVMDSRIVTDRISRRSKGIGYV 62
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKL 324
EF V V AI LSG +++G P+ ++ +EAE+N + N + + P+G + +L
Sbjct: 63 EFRTVELVDRAIGLSGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSAPHGGM--QL 120
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+ FVQ+ + E AK A +
Sbjct: 121 YVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRAEDAKMALEQME 180
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
G E+ GRTL+V++V + T+ T + D+ GG LNA SR LMQKL RT
Sbjct: 181 G-FELAGRTLRVNTVHEKGSTRYTQQDTL----DEAGGGNLNAASRQALMQKLARTD--- 232
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
S PV +P V P IP S +LLK
Sbjct: 233 ----------------------SAPVKLEP------VARPHIPQTMQ------SRSVLLK 258
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMF+P ET+ D+D ++ DV+ EC +KYG V+ I V+K + G +Y+ FE+ +AA A
Sbjct: 259 NMFNPEEETERDWDKDLADDVKSECATKYGPVQAIKVEKETQGEIYVLFETVDAAGQAIE 318
Query: 564 AMHMRWFARRLISAIFM 580
++ RWF R ISA F+
Sbjct: 319 GLNGRWFGGRQISAAFI 335
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 212/410 (51%), Gaps = 82/410 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +D++ FF KAG V+D +++ DR S RSKGVGY+EF + SV
Sbjct: 162 ERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESVA 221
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ+LLG P++ + +EAEKN N +AG T P+ +LYVGN+HF++T
Sbjct: 222 AAIRLTGQMLLGIPIIAQLTEAEKNRQARNPEATAGNQHTAPF----HRLYVGNVHFSIT 277
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L +FEPFG +E VQL D ETG+ KG+ FVQFA E A+ A +NG E+ GR +
Sbjct: 278 EDDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKMNG-FELAGRAI 335
Query: 395 KV--------------------------------------------SSVTDHVGTQDT-- 408
+V S+ D G ++T
Sbjct: 336 RVGLGNDKFTPDAHANRPSGASSTNQSNFQGSSFSGQGGRGVQAGGSNNFDRAGGRETEK 395
Query: 409 AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL 468
A ++ DD D G+ N SR LM+KL RT A P+V+ ++Q
Sbjct: 396 GAGASALDDTDVAGVNFNNYSRDALMRKLARTDDAQ---------PSVD----DRQKFLR 442
Query: 469 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEE 528
P +P+ NMA S C+LL+NMFDPA ET + E++ DV E
Sbjct: 443 PKTETKPLPINV-------NMA-------SRCVLLRNMFDPAEETGEAWIKELEEDVRSE 488
Query: 529 C-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
C KYG V HI +D S G +YL+F+ + +A + ++ R+F + I+A
Sbjct: 489 CEEKYGHVVHISLDVSSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 538
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 209/409 (51%), Gaps = 81/409 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +D++ FF KAG V+D +++ DR S RSKGVGY+EF + SV
Sbjct: 169 ERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESVA 228
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ+LLG P++ + +EAEKN NT ++G T P+ +LYVGN+HF++T
Sbjct: 229 AAIRLTGQMLLGIPIIAQLTEAEKNRQARNTESTSGHHHTAPF----HRLYVGNVHFSIT 284
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L +FEPFG +E VQL D ETG+ KG+ FVQFA E A+ A +NG E+ GR +
Sbjct: 285 EEDLTNVFEPFGELEFVQLQKD-ETGRSKGYAFVQFANPEQARDALEKMNG-FELAGRAI 342
Query: 395 KVSSVTDHV------------------------------GTQDTAAKSAD---------- 414
+V D G Q + S D
Sbjct: 343 RVGLGNDKFTPDTHANRPSGASTNQPNFQGSSFSGQGGRGVQAGGSNSFDRAGGREPEKG 402
Query: 415 -----FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
DD D G+ N SR LM+KL RT P+V+ ++Q P
Sbjct: 403 AGASALDDTDVAGVNFNNYSRDALMRKLARTDDPQ---------PSVD----DRQKFLRP 449
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+P+ NMA S C+LL+NMFDPA ET ++ E++ DV EC
Sbjct: 450 KTETKPLPINV-------NMA-------SRCVLLRNMFDPAEETGENWVKELEEDVRSEC 495
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F + I+A
Sbjct: 496 EKKYGHVVHISLDASSQGDIYLKFDRVQGGENAIKGLNGRYFGGKQITA 544
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 230/437 (52%), Gaps = 69/437 (15%)
Query: 163 RRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRT 222
R + E+E L E ++ + + +RD RT
Sbjct: 122 RYDETYRYEKEIPDRLPAE--------------------------QIAKDDEGFDRDMRT 155
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
+F Q+ KA ERD+++FFS+AGKV DVR+I D +RRSKG+ Y+EF A+ S
Sbjct: 156 IFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQKS 215
Query: 283 GQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID--RKLYVGNLHFNMTETQLRK 340
GQLL G PV+V+ S+AEKN A A G +D KL V NLH ++ E L+
Sbjct: 216 GQLLCGFPVVVQASQAEKN------QAARLAAQVAGELDLPAKLQVDNLHMDIAEDDLQT 269
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV---- 396
LF PFG V V+ ++ E G+ G G V+F L+ A+ A + LNG ++ G+ L V
Sbjct: 270 LFSPFGKVLSVR--INKEHGRSTGKGVVEFKTLQDAQKAVAHLNG-FDLAGKALNVRIIQ 326
Query: 397 SSVTDHVGTQDTAAKSAD--FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
S+ + + G+ ++ A DD++ GG+ ++AQSR LMQKL R G +
Sbjct: 327 SAGSGYTGSMSSSGGPATEMLDDNEIGGVHVSAQSRHSLMQKLAR--------GDAQLTS 378
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
AV S ++ QP+ P A IPN ++ PS ++L NMFDPA ET+
Sbjct: 379 AVPNSLMSGAL-------QPSKP-----ANAIPNGQSQ----PSVFMVLVNMFDPAKETE 422
Query: 515 PDFDLEIQGDVEEEC-SKYGRVKHIYVD-KRSAGFVYLRFESTEAAASAQRAMHMRWFAR 572
PDF +EIQ DV+EEC +K+GRV + D K G VY+RF+ST+ A AQ + R+FA
Sbjct: 423 PDFHVEIQDDVKEECEAKFGRVIQVVADRKHPNGLVYVRFDSTDTAQKAQAGLQGRFFAG 482
Query: 573 RLISAIFMKPEDYEAKF 589
+ ISAI++ +EA
Sbjct: 483 KQISAIYLAQGTFEANI 499
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 223/419 (53%), Gaps = 37/419 (8%)
Query: 195 LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
E R S K++ EP D ERD+RTVF Q+ + R++ EFF + G V D +++
Sbjct: 133 CERRPSPHRGTKRKTPEP-TDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVK 191
Query: 255 DRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 314
DR S RSKGVGY+EF + SV AI L+GQ LLG P++ + +EAEKN NT GTAT
Sbjct: 192 DRVSGRSKGVGYVEFKEEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARNTE--GTAT 249
Query: 315 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLE 374
G +LYVGN+HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF
Sbjct: 250 QSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKE-EAGRSKGYGFVQFIDPA 308
Query: 375 HAKAAQSALNGKLEIVGRTLKV------------SSVTDHVGTQDTAAKSADFDDDDG-G 421
AK A +NG E+ GR ++V +S+ G Q A + G G
Sbjct: 309 QAKEALEKMNG-FELAGRPIRVGLGNDKFTPESTNSLLQRFGAQAQQAHNFQGSQFSGMG 367
Query: 422 GLALNAQSRALL----MQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAI--SLPVVGQP- 474
G +A + +D+TG A+++ + VN S ++ A+ L +P
Sbjct: 368 GRGAHAGGTGNFDRPAARDVDKTGGASALDDT--DVGGVNFSNYSRDALMRKLARTDEPE 425
Query: 475 --AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SK 531
P PV+ AA + C+L+KNM+D ETDP++ E++ DV+ EC +K
Sbjct: 426 QKMAPKTQQKKPVVEQAAA------TRCVLIKNMYDQNTETDPNWQKELKEDVKGECEAK 479
Query: 532 YGRVKHI-YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
YG+V HI + G VY++F+ + +A + ++ RWF R+++A ++ Y F
Sbjct: 480 YGKVVHIDLALDNNDGEVYVKFDRVQGGENAFKGLNGRWFGGRMLTAQYVVDAVYHMNF 538
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 215/396 (54%), Gaps = 62/396 (15%)
Query: 198 RESRRYKEKKEVVEPEADPERDQ--RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRL 252
R S Y+ E PE E D R+VF Q+ + T RD+ FF G V D R+
Sbjct: 78 RPSPTYEAPPEDYNPEEPKEDDSEARSVFVSQLAARLTARDLGYFFEDKLGEGTVMDARI 137
Query: 253 IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS-----NT 307
+ DR SRRSKG+GY+E + V AI LSG +++G P+ V+ +EAE+N + N
Sbjct: 138 VTDRLSRRSKGIGYVELKTIELVDQAINLSGTVVMGLPIKVQHTEAERNRTHAGDGSLNL 197
Query: 308 SAGGTAT-GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
G + T GP R+LYVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KG+
Sbjct: 198 PPGVSGTHGP-----RQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGYC 252
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN 426
F+Q+ + E AK A + G E+ GRTL+V++V + + T +S +++GG LN
Sbjct: 253 FIQYKRAEDAKMALEQMEG-FELAGRTLRVNTVHEKGTVKYTQQESL---EENGGN--LN 306
Query: 427 AQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA-VPVPAVTAPV 485
A SR LMQKL R +PA PV V+ PV
Sbjct: 307 AASRQALMQKLARI--------------------------------EPARAPVETVSKPV 334
Query: 486 IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRS 544
I S+ +LLKNMFDPA ET+ D+D ++ DV+ EC +KYG V I VDK S
Sbjct: 335 ITQTLQ------SKSVLLKNMFDPAEETEKDWDKDLADDVKVECENKYGMVNFIKVDKES 388
Query: 545 AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
G +Y++F++ ++A A ++ R+F R ++A F+
Sbjct: 389 QGEIYVKFDTVDSAKKAIEGLNGRYFGGRQVTATFI 424
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 212/385 (55%), Gaps = 58/385 (15%)
Query: 212 PEADP---------ERDQRTVFAYQMPLKATERDVYEFF-SKAGK--VRDVRLIMDRNSR 259
P+ DP + + R+VF Q+ + T RD+ FF K G+ V D R++ DR SR
Sbjct: 58 PQPDPFDEDAPNPQDSEARSVFVSQLAARLTARDLGYFFEDKLGENTVMDARIVTDRISR 117
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQS---NTSAGGTATGP 316
RSKG+GY+EF V V A+ LSG +++G P+MV+ +EAE+N + + N + + P
Sbjct: 118 RSKGIGYVEFRTVDLVDKALDLSGTVVMGLPIMVQLTEAERNRLHAGDGNLNLPPGVSAP 177
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+G +LYVG+LHFN+TE ++++FEPFG +E V L D TG+ KG+ FVQ+ + E A
Sbjct: 178 HGGA-MQLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDPTTGRSKGYAFVQYKRAEDA 236
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQK 436
+ A + G E+ GR LKV++V D G A++ DD GG LNA SR LMQK
Sbjct: 237 RMAMEQMEG-FELAGRQLKVNTVHDKGGVV-RYAQTESLDDSGGGN--LNAASRQALMQK 292
Query: 437 LDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 496
L RT A P +P P V P IP
Sbjct: 293 LARTDSA------------------------------PLLPEP-VARPNIPQTME----- 316
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFEST 555
S +LLKNMFDP E+ D+D E+ DV+ EC SKYG+V I V+K + G +Y++F++
Sbjct: 317 -SRSVLLKNMFDPEEESGDDWDKELADDVKGECESKYGKVSAIKVEKETQGEIYVKFDAV 375
Query: 556 EAAASAQRAMHMRWFARRLISAIFM 580
+AA A + ++ RWF + +SA F+
Sbjct: 376 DAARKAVQGLNGRWFGGKQVSAAFI 400
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 202/387 (52%), Gaps = 22/387 (5%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+RD RTVF + K ER +++FFSK GKV DVR+I DRNS SKG+ Y+EF D +
Sbjct: 5 DRDTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIH 64
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA----------GGTATGPYGAIDRKLYV 326
A+ +G L G + VK SEAEKN+ A GA KL V
Sbjct: 65 PALECTGMELHGNAISVKTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGAGGGAGPCKLRV 124
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
G LH ++E ++ +FEPFG ++ + + L + G+ FVQF Q A A S LNG
Sbjct: 125 GGLHLALSEDDIKAVFEPFGQLDFISM-LKEDDGKYAS-AFVQFRQTSQAMLALSQLNG- 181
Query: 387 LEIVGRTLKVS----SVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 442
LE+VG ++VS T T +S D+DGGGL ++++ RA LM +L G
Sbjct: 182 LELVGIPIRVSIASQGATAAASTMVAPTESLGELDEDGGGLKMDSRGRAALMARL--AGQ 239
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 502
I + PA G AI + P +P P+ + P+ CLL
Sbjct: 240 DKEIEKGFTIDPA-TGLPTTVDAIK--PIDAPGEDLPLAAQPITQGVLGPGSPIPTPCLL 296
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
LKN+F+ A ETDP++ L+I DV+ EC K+G + H +VDK S GFVYL+F ++ AQ
Sbjct: 297 LKNLFNAAEETDPEWWLDIAEDVKGECEKFGEITHTFVDKDSQGFVYLKFADVASSTRAQ 356
Query: 563 RAMHMRWFARRLISAIFMKPEDYEAKF 589
+A+H RWFA R I+A + Y F
Sbjct: 357 QALHTRWFAGRKIAAEYQFAATYNGHF 383
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 205/367 (55%), Gaps = 50/367 (13%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
R+VF Q+ + T RD+ FF G VRD R++ DR SRRSKG+GY+E + V
Sbjct: 249 RSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRISRRSKGIGYVELRSIDLVTK 308
Query: 278 AIALSGQLLLGQPVMVKPSEAEKNLVQS--NTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
A+ LSG +++G P+MV+ +EAE+N V + N + + P G +LYVG+LHFN+TE
Sbjct: 309 ALDLSGTIVMGLPIMVQLTEAERNRVHAGENLNLPPGVSAPQGGA-MQLYVGSLHFNLTE 367
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
++++FEPFG ++ V L D TG+ KG+ FVQ+ + E AK A ++G E+ GRTL+
Sbjct: 368 QDIKQVFEPFGELDFVDLHRDPGTGRSKGYAFVQYKRAEDAKMALEQMDG-FELAGRTLR 426
Query: 396 VSSVTDH-VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
V+SV + V ++T + D +D GGG LNA SR LMQKL R
Sbjct: 427 VNSVNEKGVAVRNTT--TIDSLEDSGGG-NLNAASRQALMQKLAR--------------- 468
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
I P QP IP + + +LL NMFDP ET+
Sbjct: 469 -----------IDPPKSSQPE------ARKHIPQNQS------TRSVLLLNMFDPDEETE 505
Query: 515 PDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARR 573
PD+D ++ DV+ EC SKYG V + ++K S G +Y++FES ++A A +++ RWF R
Sbjct: 506 PDWDKDLADDVKGECASKYGPVTALKIEKDSQGEIYVQFESVDSAKKAVDSLNGRWFGGR 565
Query: 574 LISAIFM 580
++A F+
Sbjct: 566 QVNARFI 572
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 217/433 (50%), Gaps = 77/433 (17%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E P + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVG
Sbjct: 177 KRETTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVG 236
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
Y+EF + SVP AI L+GQ LLG P++ + +EAEKN N A T++ P +LY
Sbjct: 237 YVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEA--TSSNPNQIPFHRLY 294
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF A+ A +NG
Sbjct: 295 VGNIHFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPSQAREALEKMNG 353
Query: 386 KLEIVGRTLKVSSVTDHVGTQDT------------------------------AAKSADF 415
++ GR ++V D + T AA +F
Sbjct: 354 -FDLAGRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQAANGGNF 412
Query: 416 ------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 457
DD D GG+ N SR LM+KL RT APA
Sbjct: 413 DRAGGRDNEKSSGGASALDDTDVGGVNFNNYSRDALMRKLARTDEP---------APATK 463
Query: 458 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 517
G ++ + +P A+ PV NMA S C++LKNMFDPA E +
Sbjct: 464 GRDERREVV------KPKTEAKAL--PVNVNMA-------SRCVVLKNMFDPAEEEGDSW 508
Query: 518 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
+ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+IS
Sbjct: 509 EKELEDDVRAEAEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMIS 568
Query: 577 AIFMKPEDYEAKF 589
A + Y + F
Sbjct: 569 ATPVVDAVYSSLF 581
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 223/442 (50%), Gaps = 80/442 (18%)
Query: 198 RESRRYKE-KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
RE RR + K+E P ++ ERD+RTVF Q+ + +++ FF K G V++ +++ DR
Sbjct: 153 REERRPRSPKREGTPPLSEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDR 212
Query: 257 NSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP 316
S RSKGVGY+EF + SVP AI L+GQ LLG P++ + +EAEKN N A T + P
Sbjct: 213 VSGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEA--TTSNP 270
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+LYVGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF A
Sbjct: 271 NQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQA 329
Query: 377 KAAQSALNGKLEIVGRTLKV------------------------------SSVTDHVGTQ 406
+ A +NG ++ GR ++V S+ + G
Sbjct: 330 REALEKMNG-FDLAGRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRG 388
Query: 407 DTAAKSADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 448
TAA ++F DD D GG+ N SR LM+KL RT T A
Sbjct: 389 PTAAGGSNFDRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDDTTVAAN 448
Query: 449 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 508
++ +S P A+PV NMA S C++LKNMFD
Sbjct: 449 H------------ERREVSKPKTETKALPVNV-------NMA-------SRCVVLKNMFD 482
Query: 509 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
P E +++ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++
Sbjct: 483 PTEEDGENWEKELEDDVRAEAEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNG 542
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
R+F R+ISA + Y + F
Sbjct: 543 RYFGGRMISATPVVDAVYSSLF 564
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/483 (33%), Positives = 243/483 (50%), Gaps = 93/483 (19%)
Query: 142 RRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESR 201
RR RSR + RR R R R+ E + R++ER R R+ L+ S
Sbjct: 181 RRHGDRSREAD---RRYGDRPHRLRDPRDEFDDPPRFGRDKERSR--RDHRTPLDEARSE 235
Query: 202 RYKEKKEV---------VEP--EADP---------ERDQRTVFAYQMPLKATERDVYEFF 241
R ++K V EP + DP + + R+VF Q+ + T RD+ FF
Sbjct: 236 RSHDRKSVPPVTRPSPSYEPIVDVDPMNPEEPREDDSEARSVFVSQLAARLTARDLGYFF 295
Query: 242 SKA---GKVRDVRLIMDRNSRRSKG-----------------VGYIEFYDVMSVPMAIAL 281
G V D R++ DR SRRSKG +GY+EF V V AIAL
Sbjct: 296 EDKLGEGSVMDSRIVTDRISRRSKGLLLIISRINTSLTFCLRIGYVEFRTVELVDKAIAL 355
Query: 282 SGQLLLGQPVMVKPSEAEKNLVQ---SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
SG +++G P+ ++ +EAE+N + N + + +G + +LYVG+LHFN+TE+ +
Sbjct: 356 SGTVVMGLPIQIQHTEAERNRLHPGDGNLNLPPGVSASHGGM--QLYVGSLHFNLTESDI 413
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
+++FEPFG +E V L D TG+ KG+ FVQ+ + E A+ A + G E+ GRTL+V++
Sbjct: 414 KQVFEPFGELEFVDLHRDPMTGRSKGYAFVQYKRSEDARMALEQMEG-FELAGRTLRVNT 472
Query: 399 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 458
V + + T S D+ GG LNA SR LMQKL RT
Sbjct: 473 VHEKGTIRYTQQDSL----DEAGGGNLNAASRQALMQKLART------------------ 510
Query: 459 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 518
+Q I+ P V +P +P S +LLKNMF+P ET+ D+D
Sbjct: 511 ---DQTVITPPPVVRPNIPQTM----------------QSRSVLLKNMFNPENETERDWD 551
Query: 519 LEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
++ DV+ EC KYG+V+ I V+K S G +Y++F+S E+A +A + ++ RWF +SA
Sbjct: 552 KDLAEDVKYECEDKYGKVEFIKVEKDSQGEIYVKFDSVESAKNAIQGLNGRWFGGNQVSA 611
Query: 578 IFM 580
F+
Sbjct: 612 GFI 614
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 222/442 (50%), Gaps = 80/442 (18%)
Query: 198 RESRRYKE-KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
RE RR + K+E P + ERD+RTVF Q+ + +++ FF K G V++ +++ DR
Sbjct: 153 REERRPRSPKREGTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDR 212
Query: 257 NSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP 316
S RSKGVGY+EF + SVP AI L+GQ LLG P++ + +EAEKN N A T + P
Sbjct: 213 VSGRSKGVGYVEFKNEESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEA--TTSNP 270
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+LYVGN+HF++TE L+ +FEPFG +E VQL + E G+ +G+GFVQF A
Sbjct: 271 NQIPFHRLYVGNIHFSITEADLQNVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQA 329
Query: 377 KAAQSALNGKLEIVGRTLKV------------------------------SSVTDHVGTQ 406
+ A +NG ++ GR ++V S+ + G
Sbjct: 330 REALEKMNG-FDLAGRPIRVGLGNDKFTPESTASLLQRFHGQSHQQQFQGSAFSGAGGRG 388
Query: 407 DTAAKSADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 448
TAA ++F DD D GG+ N SR LM+KL RT T+ A
Sbjct: 389 PTAAGGSNFDRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDDTTTAAN 448
Query: 449 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 508
++ +S P A+PV NMA S C++LKNMFD
Sbjct: 449 H------------ERREVSKPKTETKALPVNV-------NMA-------SRCVVLKNMFD 482
Query: 509 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
P E +++ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++
Sbjct: 483 PTEEDGENWEKELEDDVRAEAEEKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNG 542
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
R+F R+ISA + Y + F
Sbjct: 543 RYFGGRMISATPVVDAVYSSLF 564
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 224/411 (54%), Gaps = 60/411 (14%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
RD TV + LKA ERD+YEFFS+ AGKVRD++ I D+ S +SKGV Y+EFY SV
Sbjct: 622 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVV 681
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL---HFNM 333
A++ +G +L +P+ ++ S+AEKN ++ +A P I KLY+G L N+
Sbjct: 682 KALSANGYMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLYIGGLVGPLGNI 738
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE +L++LF PFG + V++ D TG+CKGFGF+QF + A A LNG +EI GR
Sbjct: 739 TEVELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNG-MEIAGRE 797
Query: 394 LKVSSVTDH---VGTQDTA---------AKSADFDD--------------DDGGGLALNA 427
LKVS D + ++ A AK A ++ DDGGGL A
Sbjct: 798 LKVSFAQDSKYILASEKEAKEKILAQLLAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGA 857
Query: 428 QSRALLMQKLDR-----TGIATSIA-GSLGVAPAVNGSAVNQQAISLPVVGQP-AVPVPA 480
S+ LMQKL R +GI++ A G+ + A +A AI + G P A P+
Sbjct: 858 GSKIALMQKLQRDTVLDSGISSQFATGANAIMHAAPLAAAQSNAI---MHGAPLAAAQPS 914
Query: 481 VTAPVIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDVEEECSKYGRVKH 537
+ PN L+L NMF P ++ +DPDF +I DV+EECSKYG +
Sbjct: 915 ALNNITPN------------LVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSIAK 962
Query: 538 IYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 587
I++D ++ G +Y+++ + + + A + ++ R+F LISA F+ E +++
Sbjct: 963 IWLDSKNIDGKIYIKYATPDESLKAFQFLNGRYFGGSLISAYFITAEVWDS 1013
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 215/421 (51%), Gaps = 94/421 (22%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ FF K G VRD +++ DR S RSKGVGY+EF D SV
Sbjct: 108 ERDRRTVFVQQLAARLRTRELIAFFEKVGPVRDAQVVKDRVSGRSKGVGYVEFRDEESVH 167
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGG-TATGPYGAIDRKLYVGNLHFN 332
AI ++GQ LLG P++V+ +EAEKN ++ S+GG + P+ +LYVGN+HFN
Sbjct: 168 KAINMTGQRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPF----HRLYVGNIHFN 223
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE LR++FEPFG +E VQL + +TG+ +G+GFVQ A+ A +NG E+ GR
Sbjct: 224 LTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQ--DPAQARDALEKMNG-FELAGR 280
Query: 393 TLKVSSVTDHVGTQDTAAKSADF-------------------------------DDDDGG 421
++V D + T+A A F DD++ G
Sbjct: 281 AIRVGLGNDKFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNEAG 340
Query: 422 GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAV 481
G++ N SR LM+KL R SI G+A P P PAV
Sbjct: 341 GVSFNNISRDALMRKLAREEGKESI----GLA--------------------PPKPTPAV 376
Query: 482 TAPVIPNMAAEFIGSPSECLLLKNMFDPA--------------METDPDFDLEIQGDVEE 527
S C+LLKNMF+P E+ ++ E++ DV+
Sbjct: 377 QM-------------TSRCVLLKNMFNPQEYVFVLVFKFLIFFRESGDNWIRELEDDVKA 423
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
EC +KYG+V HI+V++ S G VY++F++ A A + ++ RWF R ISA F+ Y
Sbjct: 424 ECENKYGKVLHIHVEENSPGDVYIKFDNVVAGERAIQGLNGRWFGGRTISASFLIDAVYT 483
Query: 587 A 587
A
Sbjct: 484 A 484
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 215/417 (51%), Gaps = 79/417 (18%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S+RSKGVG
Sbjct: 170 KREGTPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVG 229
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYGAIDRK 323
Y+EF +V A+ L+GQ LLG P++V+ +EAEKN T A GT + P+ +
Sbjct: 230 YVEFKSEDTVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRTTEAAGTQSNSIPF----HR 285
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVGN+HFN+TE L+ +FEPFG +E VQL D +TG+ +G+GFVQ+ A+ A +
Sbjct: 286 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DTGRSRGYGFVQYRDAGQAREALEKM 344
Query: 384 NGKLEIVGRTLKV----------------------------------------SSVTDHV 403
NG ++ GR ++V +S D
Sbjct: 345 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFSGREQPFQGSAFSGAGGRGPQNSTFDRA 403
Query: 404 GTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 461
G +D+ + ++ DD D G+ N SR LM+KL RT A+ +AV
Sbjct: 404 GGRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDAS--------------NAV 449
Query: 462 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 521
+++ P +PV NMA S C++L NMFDP E D+ E+
Sbjct: 450 DERQTLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGEDWAKEL 495
Query: 522 QGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
+ DV +E SKYGRV HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 496 EDDVRQEAESKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 552
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 216/433 (49%), Gaps = 82/433 (18%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD E RE++R + ++ E E RD+RTVF Q+ + R++ EFF K G V +
Sbjct: 152 RGRDDERRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFEKVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG 310
+++ DR S+RSKGVGY+EF + SV A+ L+GQ LLG PV+V+ +EAEKN N A
Sbjct: 208 QIVKDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEAS 267
Query: 311 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
G P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 268 GPH--PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQF 324
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKV---------------------------------- 396
A+ A +NG ++ GR ++V
Sbjct: 325 RDAGQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQNQNFQGSAFS 383
Query: 397 --------SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATS 445
SS D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 384 GSGGRGPQSSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS-- 440
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
A NG Q V +P + PV NMA S C++L N
Sbjct: 441 ---------ATNGHDERQ-------VLKPKTETKPL--PVNVNMA-------SRCVVLHN 475
Query: 506 MFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 564
MFDP E D+ E++ DV +E SKYG V HI D S G +YL+F+ + +A +
Sbjct: 476 MFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISADPNSKGDIYLKFDKVQGGENAIKG 535
Query: 565 MHMRWFARRLISA 577
++ R+F R+I A
Sbjct: 536 LNGRYFGGRMIDA 548
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 213/377 (56%), Gaps = 49/377 (12%)
Query: 209 VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVG 265
V+E D + + R+VF Q+ + T RD+ FF G VRD R++ DR SRRSKG+G
Sbjct: 53 VIEEINDEDSEARSVFVSQLAARLTARDLGYFFEDKLGEGAVRDARIVTDRLSRRSKGIG 112
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG---GTATGPYGAIDR 322
Y+EF ++ V AIALSG +++G P+M++ +E+E+N + ++S G + G++
Sbjct: 113 YVEFKNIDLVNKAIALSGTIVMGLPIMIQLTESERNKIGPSSSLHLPPGVSHPHAGSM-- 170
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+LHFN+TE+ +R++FEPFG ++ V L D TG+ KG+ F+Q+ + E A+ A
Sbjct: 171 QLYVGSLHFNLTESDIRQVFEPFGELDFVDLHRDPATGKSKGYCFIQYKRPEDARMALEQ 230
Query: 383 LNGKLEIVGRTLKVSSVTDH-VGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 441
+ G E+ GR L+V++V D GT + D +D GG L N+ SR LMQKL RT
Sbjct: 231 MEG-FELAGRQLRVNTVHDKGQGTVRISTAPQDSLEDTGGVLN-NSTSRHQLMQKLARTE 288
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 501
P+ N + + + IP + S C+
Sbjct: 289 -----------QPSKNNTMLMKSN--------------------IPQTLS------SRCV 311
Query: 502 LLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAAS 560
LL+NMFDP ET+ D+D ++ DV EC KYG+V + V+K S G +Y++FES E+A
Sbjct: 312 LLRNMFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESEGEIYIKFESVESAEK 371
Query: 561 AQRAMHMRWFARRLISA 577
A + ++ RWF + ++A
Sbjct: 372 AIKGLNGRWFGGKQVTA 388
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 209/394 (53%), Gaps = 47/394 (11%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
L + TG L + PA + +++ V + T AA
Sbjct: 363 LAEGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQP 414
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFEST 555
++C L NMF+P +++ + R G VY++ S
Sbjct: 415 LATQCFQLSNMFNPQ-------------------TQWNNYHKPFCGYR--GNVYVKCPSI 453
Query: 556 EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 454 AAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 487
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 213/382 (55%), Gaps = 57/382 (14%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIE 268
PE + + R+VF Q+ + T RD+ FF + G VRDVR++ DR SRRSKG+ Y+E
Sbjct: 294 PEHSEDSELRSVFVSQLAARLTARDLGYFFEEKLGEGSVRDVRIVTDRVSRRSKGIAYVE 353
Query: 269 FYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA----GGTATGPYGAIDRKL 324
+ V AIAL+G +++G P+MV+ +E+E+N V ++ S+ G P G++ +L
Sbjct: 354 LSSIDMVSRAIALTGTIVMGLPIMVQLTESERNKVAASGSSMHLPPGVTAPPPGSM--QL 411
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
YVG+LHFN+TE+ ++++FEPFG +E V L D TG+ KGF FVQ+ + E A+ A +++
Sbjct: 412 YVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFVQYKRSEDARMALQSMD 471
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
G ++ GR LKV++V + G ++S D+ GG L NA SR LMQKL R
Sbjct: 472 G-FDLAGRQLKVNTVHEKGGAIRYQSQSDSLDESGGGNL--NAASRQALMQKLAR----- 523
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPV-IPNMAAEFIGSPSECLLL 503
+ P P PA++ +P A + S +LL
Sbjct: 524 -------IEP----------------------PKPAISPMASLPKAAMQ-----SRSVLL 549
Query: 504 KNMF-DPAME---TDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAA 558
+NMF +P +E P++ E+ DV++EC KYG V I ++ S G +YL+F+S EAA
Sbjct: 550 RNMFKEPELEEKENGPNWAKELTDDVKQECEDKYGLVDFIKLEPDSQGEMYLKFKSIEAA 609
Query: 559 ASAQRAMHMRWFARRLISAIFM 580
+ A ++ R+F + I A F+
Sbjct: 610 SKAIEGLNGRYFGGQPIQATFI 631
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 218/434 (50%), Gaps = 82/434 (18%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD + RE++R + ++ E E RD+RTVF Q+ + R++ EFF + G V +
Sbjct: 152 RGRDDDRRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFERVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG 310
+++ DR S+RSKGVGY+EF + SV A+ L+GQ LLG PV+V+ +EAEKN N A
Sbjct: 208 QIVKDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEAS 267
Query: 311 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
G P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 268 GPH--PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQF 324
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKV---------------------------------- 396
A+ A +NG ++ GR ++V
Sbjct: 325 RDAGQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAF 383
Query: 397 ---------SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
+S D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 384 SGSGGRGPQNSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS- 441
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
AP NG Q V +P + PV NMA S C++L
Sbjct: 442 --------AP-TNGHEERQ-------VLKPKTETKPL--PVNVNMA-------SRCVVLH 476
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMFDP E D+ E++ DV +E SKYG V HI VD S G +YL+F+ + +A +
Sbjct: 477 NMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIK 536
Query: 564 AMHMRWFARRLISA 577
++ R+F R+I A
Sbjct: 537 GLNGRYFGGRMIDA 550
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 219/434 (50%), Gaps = 82/434 (18%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
R RD + RE++R + ++ E E RD+RTVF Q+ + R++ EFF + G V +
Sbjct: 152 RGRDDDRRETKREEGNPQLTEDE----RDRRTVFVQQLAARLRTRELKEFFERVGPVNEA 207
Query: 251 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG 310
+++ DR S+RSKGVGY+EF + SV A+ L+GQ LLG PV+V+ +EAEKN N A
Sbjct: 208 QIVKDRISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEAS 267
Query: 311 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
G P +LYVGN+HFN+TE L+ +FEPFG +E VQL D E G+ +G+GFVQF
Sbjct: 268 GPH--PNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQF 324
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKV---------------------------------- 396
A+ A +NG ++ GR ++V
Sbjct: 325 RDAGQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQQNPNFQGSAF 383
Query: 397 ---------SSVTDHVGTQD---TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIAT 444
+S D G +D T SA DD D G+ N SR LM+KL RT +
Sbjct: 384 SGSGGRGPQNSTFDRAGGRDNEKTGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDDS- 441
Query: 445 SIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLK 504
AP NG Q V +P + + PV NMA S C++L
Sbjct: 442 --------AP-TNGHEERQ-------VLKPKMETKPL--PVNVNMA-------SRCVVLH 476
Query: 505 NMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
NMFDP E D+ E++ DV +E SKYG V HI VD S G +YL+F+ + +A +
Sbjct: 477 NMFDPEEEEGTDWVKELEDDVRQEAESKYGHVVHISVDPNSKGDIYLKFDKVQGGENAIK 536
Query: 564 AMHMRWFARRLISA 577
++ R+F R+I A
Sbjct: 537 GLNGRYFGGRMIDA 550
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 220/439 (50%), Gaps = 80/439 (18%)
Query: 190 ERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
+R+RD R + + EP+ + ERD+RTVF Q+ + +++ FF K G V+
Sbjct: 156 KRDRDGRRRSPSSGRRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVK 215
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 308
+ +++ DR S RSKGVGY+EF D SVP+AI L+GQ LLG P++ + +EAEKN N
Sbjct: 216 EAQIVKDRVSGRSKGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE 275
Query: 309 AGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 367
A A+G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GF
Sbjct: 276 A--NASGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGF 332
Query: 368 VQFAQLEHAKAAQSALNGKLEIVGRTLKV------------------------------S 397
VQF A+ A +NG ++ GR ++V S
Sbjct: 333 VQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGS 391
Query: 398 SVTDHVGTQDTAAKSADF------------------DDDDGGGLALNAQSRALLMQKLDR 439
+ H G A S F DD D G+ N SR LM+KL R
Sbjct: 392 LFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLAR 451
Query: 440 TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE 499
T PAV + ++ + P + +PV NMA S
Sbjct: 452 TD-----------EPAVEPTPDEKRKVPKPQINAKPLPVSV-------NMA-------SR 486
Query: 500 CLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAA 558
C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +YL+F+ +
Sbjct: 487 CVLLRNMFDPAEEEGESWVKELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGG 546
Query: 559 ASAQRAMHMRWFARRLISA 577
+A + ++ R+F R ISA
Sbjct: 547 ENAIKGLNGRFFGGRQISA 565
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 214/446 (47%), Gaps = 81/446 (18%)
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVF 224
+++RE E+ +RD RTVF
Sbjct: 128 QQKRELEKL-------------------------------------------DRDTRTVF 144
Query: 225 AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ 284
AY + KA ER++Y+FFS AG V DVR+I DRN+ RSKG+ Y+EF D S+ A++L+GQ
Sbjct: 145 AYNLSTKADEREIYKFFSAAGIVSDVRIIYDRNTPRSKGMAYVEFKDKASIENALSLTGQ 204
Query: 285 LLLGQPVMVKPSEAEKNLVQSNTSAG-------GTATGPYGAIDR---------KLYVGN 328
L Q VMVK SEAEKN+ A T P AI+ KL V
Sbjct: 205 TLRNQVVMVKSSEAEKNIAWEAEQATKREEQKLATTVDP--AINPNLNPTAGPCKLRVEG 262
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+H N+ E L+ +FEPFG + + + D G VQ+ + A A S LNG LE
Sbjct: 263 VHPNVREEDLKAVFEPFGETDFITIDKDQSGG-----AHVQYKLTQQAMLAVSQLNG-LE 316
Query: 389 IVGRTLKVSSVTDHVGTQDTAA-----KSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 443
+VG+TLKV V AA +A +D G+ ++++ RA LM +L
Sbjct: 317 LVGKTLKVFVAPVVVNPATAAAIAYTQANAVSLSEDAEGVRMDSRGRAALMARL----AG 372
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
TS G A Q+A L PA +P + P P++ LLL
Sbjct: 373 TSDGGDFAGVDASGRVITAQEAAKLATPQMPAAALPTAQGVLGPGSPI-----PTQTLLL 427
Query: 504 KNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQR 563
KN+FDP ET+P++ +I DV++EC K+G V H +VDK S GFVYL+F + A AQ
Sbjct: 428 KNLFDPKEETEPEWWNDIAEDVKDECGKHGAVAHCHVDKDSEGFVYLKFAEVKGAERAQA 487
Query: 564 AMHMRWFARRLISAIFMKPEDYEAKF 589
A+H RWFA R+I+A + Y F
Sbjct: 488 ALHSRWFAGRMIAAEYQFTAVYNKHF 513
>gi|330791359|ref|XP_003283761.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
gi|325086384|gb|EGC39775.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
Length = 630
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 244/527 (46%), Gaps = 94/527 (17%)
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
R+K+ R+RD R S+SRSR S S +S++R +E+E + E
Sbjct: 129 RDKDYSRDRD--RESTSRSRHSDS-----ASKNRDSKEKEISNGN-----KPSSVESPSL 176
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 249
++ +++ PE D E DQRTVF ++ ++D+Y+ FSKAGKV
Sbjct: 177 TSSKETNGKDTSSSLSSSTSTLPEPDEESDQRTVFVSKISQNVVDKDLYDLFSKAGKVLG 236
Query: 250 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA 309
V+LI+D+ ++++KGVGY+EF + + V A+ALSG L GQ + V + EK
Sbjct: 237 VQLIVDKVTKKNKGVGYVEFAEKVMVERAVALSGSYLDGQAITVHAIQPEKK-------- 288
Query: 310 GGTATGPYG--AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 367
T P G A ++YVG +H ++TE Q+R +F+P+G +E + + + G K F F
Sbjct: 289 ---TTKPTGISAEQSRIYVGYIHLSVTEEQIRVIFQPYGDIEFIN--IHTKPGISK-FAF 342
Query: 368 VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALN- 426
+QF E AK A S LNG E++G+ LK++ V+ T + ++ G A N
Sbjct: 343 IQFRTQESAKRAISELNG-YELMGKNLKLNMVSQEKNANGTYVQIPQINNIVHHGYAPNQ 401
Query: 427 -AQSRALLMQKLDRTGIATS-----------------IAGSL------------------ 450
+ A + L G + I L
Sbjct: 402 AYNATASAVAALQHQGFPVNPYYLQQQHPHQQHFQSQIQAHLQQGATNNSNQHTFKENTP 461
Query: 451 ---------GVAPAVNGSAV---NQQAISLPVVGQPAVPVPAV-------TAPVIPNMAA 491
G+ +G A+ Q LP Q PA+ PNM
Sbjct: 462 LSSLDEDDGGIPLTAHGRALLTAKLQGKVLPTPQQQMAKAPAIQQQQQQQQQQQQPNMQT 521
Query: 492 EFI---------GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 542
I G S CL+L+NMFDP ET+ D+D +I + ECS++G+++HIY+DK
Sbjct: 522 SVIQPYTSLPQFGFSSTCLILRNMFDPDTETEEDWDQDITTETHSECSQFGKIQHIYLDK 581
Query: 543 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ G +Y+R+++ E+ A + +H RWF++ I A + Y+ KF
Sbjct: 582 NTKGCIYIRYDNPESPLKAIQKLHGRWFSKNEIIAELVPEPVYKLKF 628
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 204/404 (50%), Gaps = 74/404 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF SVP
Sbjct: 179 ERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKSEDSVP 238
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+A+ L+GQ LLG PV+V+ +EAEKN N + + P +LYVGN+HFN+TE
Sbjct: 239 LALQLTGQKLLGIPVIVQHTEAEKNRQARNPDS--SNAHPNSVPFHRLYVGNIHFNVTEQ 296
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 297 DLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FDLAGRPIRV 354
Query: 397 S---------------------------------------SVTDHVGTQD---TAAKSAD 414
S D G +D T SA
Sbjct: 355 GLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSTFDRAGGRDSEKTGGASA- 413
Query: 415 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 474
DD D G+ N SR LM+KL RT A + NG+ QQ + +P
Sbjct: 414 LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNDERQQILKPKTETKP 462
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYG 533
PV NMA S C++L NMFDPA E D+ E++ +V +E KYG
Sbjct: 463 --------LPVNVNMA-------SRCVVLHNMFDPAEEEGDDWVKELEDEVRQEAEEKYG 507
Query: 534 RVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 508 HVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 551
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 215/427 (50%), Gaps = 75/427 (17%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E + ERD+RTVF Q+ + RD+ FF K G V + +++ DR S+RSKGVG
Sbjct: 165 KREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVG 224
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
Y+EF + SV A+ L+GQ LLG P++V+ +EAEKN T TA P +LY
Sbjct: 225 YVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTET--TAAHPNSIPFHRLY 282
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ + A+ A +NG
Sbjct: 283 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNG 341
Query: 386 KLEIVGRTLKV----------------------------------------SSVTDHVGT 405
++ GR ++V +S D G
Sbjct: 342 -FDLAGRPIRVGLGNDKFTPESTANILQRFPGQNPQYQGSAFSGAGGRGPQTSAFDRAGG 400
Query: 406 QDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 463
+D+ + ++ DD D G+ N SR LM+KL RT A++ V++
Sbjct: 401 RDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDASN--------------GVDE 446
Query: 464 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
+ + P +PV NMA S C++L NMFDP E D+ E++
Sbjct: 447 RQLLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGDDWVKELED 492
Query: 524 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV +E +KYGRV HI VD S G +YL+F+ + +A R ++ R+F R+I A +
Sbjct: 493 DVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDASPVVD 552
Query: 583 EDYEAKF 589
Y + F
Sbjct: 553 AVYSSLF 559
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 209/413 (50%), Gaps = 83/413 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF D SVP
Sbjct: 197 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDEESVP 256
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++ + +EAEKN N A G + P+ +LYVGN+HF++
Sbjct: 257 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF----HRLYVGNIHFSI 312
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A +NG ++ GR
Sbjct: 313 TESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRP 370
Query: 394 LKV------------------------------SSVTDHVGTQDTAAKSADF-------- 415
++V S + H G A S +F
Sbjct: 371 IRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGNFDRAGGRDN 430
Query: 416 ----------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA 465
DD D G+ N SR LM+KL RT PAV ++
Sbjct: 431 DKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAVEPKPDEKRK 479
Query: 466 ISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDV 525
+ P + A P+ PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 480 VPKPQLN--AKPL-----PVTVNMA-------SRCVLLRNMFDPAEEEGDGWIKELEDDV 525
Query: 526 EEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 526 RAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 578
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 207/411 (50%), Gaps = 79/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 186 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 245
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+AI L+GQ LLG P++ + +EAEKN N A +G +I +LYVGN+HF++TE
Sbjct: 246 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITE 303
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A +NG ++ GR ++
Sbjct: 304 SDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIR 361
Query: 396 V------------------------------SSVTDHVGTQDTAAKSADF---------- 415
V S + H G A S F
Sbjct: 362 VGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDK 421
Query: 416 --------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
DD D G+ N SR LM+KL RT PAV + ++ +
Sbjct: 422 AAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAVEPTPDEKRKVP 470
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P V +PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 471 KPQVNAKPLPVSV-------NMA-------SRCVLLRNMFDPAEEEGESWIKELEDDVRA 516
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 517 ECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 207/411 (50%), Gaps = 79/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 185 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 244
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+AI L+GQ LLG P++ + +EAEKN N A +G +I +LYVGN+HF++TE
Sbjct: 245 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITE 302
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+ A +NG ++ GR ++
Sbjct: 303 SDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIR 360
Query: 396 V------------------------------SSVTDHVGTQDTAAKSADF---------- 415
V S + H G A S F
Sbjct: 361 VGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDK 420
Query: 416 --------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
DD D G+ N SR LM+KL RT PAV + ++ +
Sbjct: 421 AAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAVEPTPDEKRKVP 469
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P V +PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 470 KPQVNAKPLPVSV-------NMA-------SRCVLLRNMFDPAEEEGESWIKELEDDVRA 515
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 516 ECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 566
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 214/430 (49%), Gaps = 84/430 (19%)
Query: 200 SRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNS 258
S R + K + EP+ + ERD+RTVF Q+ + +++ +FF KAG V++ +++ DR S
Sbjct: 147 SPRKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVS 206
Query: 259 RRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG 318
RSKGVGY+EF + SVP+AI ++GQ LLG P++ + +EAEKN N A +T +
Sbjct: 207 GRSKGVGYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPEA---STSHHN 263
Query: 319 AID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK 377
++ +LYVGN+HF++TE L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+
Sbjct: 264 SVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAR 322
Query: 378 AAQSALNGKLEIVGRTLKVSSVTDHVGTQDT----------------------------- 408
A +NG ++ GR ++V D + T
Sbjct: 323 EALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHSGGSQGSAFSGLGGRGA 381
Query: 409 --------------------AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 448
A ++ DD D G+ N SR LM+KL RT
Sbjct: 382 HAGGSGGAFDRAGGRDNDKGAGNASALDDTDVAGVNFNNYSRDALMRKLARTD------- 434
Query: 449 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 508
PA A ++A LP +PV A S C+LL+NMFD
Sbjct: 435 ----EPA--HEAETKRAAVLPKKESKPLPVNVSQA--------------SRCVLLRNMFD 474
Query: 509 PAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
PA E ++ E++ DV EC KYG V HI VD + G +YL+FE +A + ++
Sbjct: 475 PAEEEGENWVKELEDDVRAECEEKYGHVVHISVDPNTQGDIYLKFERVSGGENAIKGLNG 534
Query: 568 RWFARRLISA 577
R+F R ISA
Sbjct: 535 RYFGGRQISA 544
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 205/404 (50%), Gaps = 74/404 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF K G V + +++ DR S+RSKGVGY+EF + SV
Sbjct: 174 ERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEESVT 233
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
A+ L+GQ LLG PV+V+ +EAEKN N A G P +LYVGN+HFN+TE
Sbjct: 234 QALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPH--PNSIPFHRLYVGNIHFNVTEQ 291
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L+ +FEPFG +E VQL D E G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 292 DLQAVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAGQAREALEKMNG-FDLAGRPIRV 349
Query: 397 ----------------------------------------SSVTDHVGTQDT--AAKSAD 414
SS D G +D+ S+
Sbjct: 350 GLGNDKFTPESTANMLQRFSGQNQSFQGSAFSGAGGRGPQSSTFDRAGGRDSEKTGGSSA 409
Query: 415 FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP 474
DD D G+ N SR LM+KL RT + NG+ Q V +P
Sbjct: 410 LDDTDVAGVNFNNYSRDALMRKLARTDDTNT-----------NGNDERQ-------VLKP 451
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYG 533
+ + P+ NMA S C++L NMFDP E D+ E++ DV +E S+YG
Sbjct: 452 KMETKPL--PMNVNMA-------SRCVVLHNMFDPEEEEGDDWVKELEDDVRQEAESRYG 502
Query: 534 RVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 503 HVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 546
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 213/417 (51%), Gaps = 72/417 (17%)
Query: 204 KEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 262
K + + EP+ + ERD+RTVF Q+ + +++ FF KAG V+D +++ DR S RSK
Sbjct: 177 KPRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 236
Query: 263 GVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID- 321
GVGY+EF + SVP+AI L+GQ LLG P++ + +EAEKN N A G +G +I
Sbjct: 237 GVGYVEFKNEESVPVAIQLTGQKLLGIPIIAQFTEAEKNKAARN--AEGHVSGNQNSIPF 294
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A+ A
Sbjct: 295 HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALE 353
Query: 382 ALNGKLEIVGRTLKVSSVTDHV--------------------------GTQDTA------ 409
+NG ++ GR ++V D GTQ +
Sbjct: 354 KMNG-FDLAGRPIRVGLGNDKFSSDSATNLMRLQSQGQQGSLYGQGGRGTQAASNFDRAG 412
Query: 410 --------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 461
++ DD D G+ N SR LM+KL RT PA + S
Sbjct: 413 GRDNDKGIGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAADTSTD 461
Query: 462 NQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI 521
+++ P A PV NMA S C+LL+NMFDP E + E+
Sbjct: 462 DKRKA-------PKARTEAKPLPVSVNMA-------SRCVLLRNMFDPTEEEGDSWVKEL 507
Query: 522 QGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
+ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 508 EDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 564
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 215/427 (50%), Gaps = 75/427 (17%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E + ERD+RTVF Q+ + RD+ FF K G V + +++ DR S+RSKGVG
Sbjct: 165 KREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVG 224
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
Y+EF + SV A+ L+GQ LLG P++V+ +EAEKN T T+ P +LY
Sbjct: 225 YVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTET--TSAHPNSIPFHRLY 282
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ + A+ A +NG
Sbjct: 283 VGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYREASQAREALEKMNG 341
Query: 386 KLEIVGRTLKV----------------------------------------SSVTDHVGT 405
++ GR ++V +S D G
Sbjct: 342 -FDLAGRPIRVGLGNDKFTPESTANILQRFPGQNPQFQGSAFSGAGGRGPQTSAFDRAGG 400
Query: 406 QDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 463
+D+ + ++ DD D G+ N SR LM+KL RT A++ V++
Sbjct: 401 RDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDDASN--------------GVDE 446
Query: 464 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
+ + P +PV NMA S C++L NMFDP E ++ E++
Sbjct: 447 RQVLKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPEEEEGDEWVKELED 492
Query: 524 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKP 582
DV +E +KYGRV HI VD S G +YL+F+ + +A R ++ R+F R+I A +
Sbjct: 493 DVRQEAETKYGRVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDASPVVD 552
Query: 583 EDYEAKF 589
Y + F
Sbjct: 553 AVYSSLF 559
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 215/405 (53%), Gaps = 31/405 (7%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K++ EP D ERD+RTVF Q+ + R++ +FF + G V D +++ DR S RSKGVG
Sbjct: 222 KRKTPEP-TDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVKDRVSGRSKGVG 280
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
Y+EF D SV AI L+GQ LLG P++ + +EAEKN Q+ T+ GTAT G +LY
Sbjct: 281 YVEFKDEESVQKAIGLTGQKLLGIPIIAQLTEAEKNR-QARTTE-GTATQSNGVPFHRLY 338
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HF++TE L+ +FEPFG +E QL + E G+ KG+GFVQF AK A +NG
Sbjct: 339 VGNIHFSITEADLKNVFEPFGELEFAQLQKE-ENGRSKGYGFVQFIDPAQAKEALEKMNG 397
Query: 386 KLEIVGRTLKVSSVTDHVGTQDT-------------AAKSADFDDDDGGGLALNAQS--- 429
E+ GR ++V D T+ T A K + F G G
Sbjct: 398 -FELAGRPIRVGLGNDKFTTESTQTLLVKFGSHTPSAQKGSQFSGLGGRGAHAGGTGNFD 456
Query: 430 RALLMQKLDRTGIATSIAGS-LGVAPAVNGS--AVNQQAISLPVVGQPAVPVPAVTAPVI 486
R + +D+TG A+++ + +G N S + +Q Q P V P
Sbjct: 457 RPAAARDVDKTGGASALDDTDVGGVDFHNYSREKLMKQLARTDEPEQKIAPKTQVKKPAT 516
Query: 487 PNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHI-YVDKRS 544
S S C+L+KNM++ E++P + E++ DV+ EC KYG+V HI +
Sbjct: 517 FEQP-----SASRCVLIKNMYNQNEESEPGWQKELKDDVKSECEEKYGKVVHIDLALDNN 571
Query: 545 AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY++F+ + +A + ++ RWFA R+I+A ++ Y F
Sbjct: 572 DGEVYVKFDRVQGGENAFKGLNGRWFAGRMITAQYVVDAVYTMNF 616
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 207/411 (50%), Gaps = 78/411 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF +
Sbjct: 176 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGVGYVEFKN 235
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNL 329
SV +A+ L+GQ LLG PV+V+ +EAEKN N S G + P+ +LYVGN+
Sbjct: 236 EDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNSIPF----HRLYVGNI 291
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG ++
Sbjct: 292 HFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FDL 349
Query: 390 VGRTLKVS---------------------------------------SVTDHVGTQD--- 407
GR ++V S D G +D
Sbjct: 350 AGRPIRVGLGNDKFTPESTANLMHKFSGNNQGFQGSAFSGAGGRGQQSAFDRAGGRDSEK 409
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
T SA DD D G+ N SR LM+KL RT A + NG+ QQ +
Sbjct: 410 TGGASA-LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNDERQQILK 457
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
+P PV NMA S C++L NMFDP E D+ E++ +V +
Sbjct: 458 PKTETKPL--------PVNVNMA-------SRCVVLHNMFDPTEEEGDDWVKELEDEVRQ 502
Query: 528 ECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
E +YG V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 503 EAEERYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 205/414 (49%), Gaps = 87/414 (21%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF D SVP
Sbjct: 165 ERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDEASVP 224
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++ + +EAEKN N S+G +A+ P+ +LYVGN+HF++T
Sbjct: 225 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPF----HRLYVGNIHFSIT 280
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E ++ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR +
Sbjct: 281 ENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPI 338
Query: 395 KVS----------------------------------------------SVTDHVGTQDT 408
+V S D G +DT
Sbjct: 339 RVGLGNDKFTPESTANLLQRFQGQGHHQQYQGSAFSGNGGRGAQAGGAPSNFDRAGGRDT 398
Query: 409 ---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQA 465
++ DD D G+ N SR LM+KL RT ++
Sbjct: 399 DKGTGGASALDDTDVAGVNFNNYSRDALMRKLART---------------------DEPE 437
Query: 466 ISLPVVGQPAVP-VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
S QP P PV NMA S C+LL+NMFDP E + E++ D
Sbjct: 438 PSADEKLQPLRPKTEPKPLPVNVNMA-------SRCVLLRNMFDPTEEEGESWIKELEDD 490
Query: 525 VEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V EC KYG V HI +D S G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 491 VRAECEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 544
>gi|325187692|emb|CCA22234.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 205/416 (49%), Gaps = 59/416 (14%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
RD RTVF Q+ K ERD+ ++F+K GK V LI D+ + RSKG Y+E ++ VP
Sbjct: 5 RDHRTVFIGQLTQKVRERDLEKYFNKVGKTEHVLLIRDKFTNRSKGFAYVEMSNLEDVPK 64
Query: 278 AIALSGQLLLGQ--PVMVKPSEAEKNL------VQSNTS------AGGTATGP------- 316
+ L+GQ+ Q PVM+K SEAEKN V S+T + GP
Sbjct: 65 VLLLNGQIPEFQIFPVMIKASEAEKNFAAKKDTVMSSTMRSSDWLNSSESNGPNSALAAA 124
Query: 317 ---------YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGF 367
+ ++Y GNLH N+TE LR +F FG V V + D E G+ KG+GF
Sbjct: 125 IASSMSSGGSLSAASRIYCGNLHTNVTEDHLRVVFHSFGEVVSVNINRD-EMGRSKGYGF 183
Query: 368 VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD---------FDDD 418
+QF + A A S NG LE+ G L++ V ++ G S DDD
Sbjct: 184 IQFGTPQEANLALSKGNG-LELHGNFLRLGPVNENAGLGGMGMGSFSTMDGSHMWKLDDD 242
Query: 419 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV 478
+G G+ALN+QSR LM KL AG + P + + G+ +
Sbjct: 243 EGAGMALNSQSRTALMAKL---------AGGKDIFPNPASGSSMYTNVGSNSYGKSEISQ 293
Query: 479 PAVTAPVIPNMAAEFI-GSPSECLLLKNMFDPAME---TDPDFDLEIQGDVEEECSKYGR 534
A +A+E I G PS C ++KNMFD E +PD+ LEIQ DV EEC +G
Sbjct: 294 TERAAA----LASEKIEGVPSFCFVVKNMFDAQAEKRTGNPDWHLEIQEDVVEECESFGP 349
Query: 535 VKHIYVDK-RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
V H +V+K + G VY+ F+ E+A A MH RWF +R IS F+ ++Y F
Sbjct: 350 VLHSFVEKEKVGGLVYILFDQKESAMKAANRMHGRWFNKRQISVRFLSSQEYVGMF 405
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 215/420 (51%), Gaps = 77/420 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + ++++EFF +AG V +++ DR S RSKGVGY+EF S+P
Sbjct: 206 ERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEESLP 265
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGP--YGAIDRKLYVGNLHFNMT 334
A+ L+GQ L G PV+V+P+EAEKN Q T+ A G + +LYVGN+HF++T
Sbjct: 266 AALQLTGQKLAGIPVIVQPTEAEKNR-QVRTTENSNANGAQQNSVLFHRLYVGNIHFSIT 324
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +F PFG + VQL + + G+ +G+GFV++ +A+ A +NG ++ GR +
Sbjct: 325 EPDLRTVFGPFGELRFVQLQKE-DNGRSRGYGFVEYNDPANAREALEKMNG-FDLAGRPI 382
Query: 395 KVSSVTDHVGTQDTA---------------------------AKSADF------DDDDGG 421
+V D + TA +S++F D+D GG
Sbjct: 383 RVGLGNDKFTPESTANIMQRYPGTNGGNQGQGYPGRNGQANGPQSSNFDRAGGRDNDKGG 442
Query: 422 -----------GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 470
G+ N+ SR LM+KL RT A+S AP +Q I P
Sbjct: 443 GASALDDTDVAGVNFNSYSRDALMRKLARTDEASS-------APP------ERQQILKPK 489
Query: 471 VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC- 529
+PV NMA S C+LLKNMFDPA E+ D+ +++ DV EE
Sbjct: 490 TEIKPLPVNV-------NMA-------SRCVLLKNMFDPAEESGEDWIKDLENDVREEAE 535
Query: 530 SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
KYG V HI VD S G +YL+F+ + +A + ++ R+F +I+A + Y + F
Sbjct: 536 KKYGHVVHISVDPNSNGDIYLKFDKVQGGENAIKGLNGRYFGGNIITAAPVVDAVYSSLF 595
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 204/409 (49%), Gaps = 80/409 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SV
Sbjct: 174 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVA 233
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++T
Sbjct: 234 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGSNHAAPF----HRLYVGNIHFSIT 289
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR +
Sbjct: 290 ESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRAI 347
Query: 395 KVSSVTDHV-----------------------------------GTQD----------TA 409
+V D GT +
Sbjct: 348 RVGLGNDKFTPESNAQRMQSQGASQQNFQGSMFSGQGGRGVQAGGTNNFDRAGGRESEKG 407
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
A ++ DD D G+ N SR LM+KL RT + SA ++Q I P
Sbjct: 408 AGASALDDTDVAGVNFNNYSRDALMRKLARTDEPSEP------------SADDKQKILRP 455
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+PV NMA S C+LL+NMFDPA E + E++ DV EC
Sbjct: 456 KTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGESWIKELEDDVRAEC 501
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 502 EDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 550
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/433 (33%), Positives = 212/433 (48%), Gaps = 97/433 (22%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
R+VF Q+ + +RD+ EFF + G V+DVR++MDR +RRSKGVGY+EF VP
Sbjct: 262 RSVFCSQLSARLGQRDLGEFFEEHLGEGAVQDVRIVMDRVTRRSKGVGYVEFAARELVPK 321
Query: 278 AIALSGQLLLGQPVMVKPSEAEKNL-----------VQSNTSAGG--------------- 311
AI L+G++L G P++V+ ++A +N V S+ + GG
Sbjct: 322 AIELTGKVLFGIPIVVQRTDAGRNGPPPISAVAPHGVASHPALGGPHLDARALANVPMPM 381
Query: 312 -----------TATGPYGA-----------IDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
P G + +LYVG+LHF++T+ ++ +FEPFG +E
Sbjct: 382 QYHQAGVPIHLNVNAPPGPRAMRPGPNMPNTEARLYVGSLHFSLTDENVKAVFEPFGEIE 441
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV------TDHV 403
V L + TG+ KGF F+QF + A+ A A+NG E+ GR ++V +V + ++
Sbjct: 442 YVDLHREPGTGKSKGFCFIQFKHADDARKAHEAMNG-FELAGRAIRVGNVNAKGSGSSYM 500
Query: 404 GTQDTAAKSADFDD------DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN 457
G ++S DDGGG LN + RA LMQKL R P+
Sbjct: 501 GGPGPNSQSGGHLPQLTSAFDDGGGAGLNPERRAALMQKLARNN-----------EPSPA 549
Query: 458 GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF 517
S N P +P T S LLLKNMFDPA ET+ D+
Sbjct: 550 ASDANTATQERPAG------IPEAT---------------STSLLLKNMFDPAEETEADW 588
Query: 518 DLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
D ++ DV++EC +KYG V I+V+K SAG +YL F +A+ A ++ R+F + IS
Sbjct: 589 DKDLAEDVKDECQAKYGPVTRIHVEKESAGEIYLTFADLDASRKALDGLNGRFFGGKPIS 648
Query: 577 AIFMKPEDYEAKF 589
A ++ +AK
Sbjct: 649 AQYIPDAFVQAKL 661
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 207/402 (51%), Gaps = 63/402 (15%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF D SVP
Sbjct: 134 ERDRRTVFVQQLAARLRTKELITFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDEASVP 193
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG--PYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN ++A T T P+ +LYVGN+HF++T
Sbjct: 194 KAIQLTGQKLLGIPIIAQLTEAEKNRQARVSAAEATTTNQIPF----HRLYVGNIHFSIT 249
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E+ L+ +FEPFG +E VQL + E G+ +G+GFVQ+ A+ A +NG ++ GR +
Sbjct: 250 ESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQYRDPNQAREALEKMNG-FDLAGRPI 307
Query: 395 KVSSVTDHVGTQDTA-------------------------------------AKSADFDD 417
+V D + TA A ++ DD
Sbjct: 308 RVGLGNDKFTPESTAQMLQRFSGYQGFQGSAFDSRGRGGNDRVGRADDKASGAGASALDD 367
Query: 418 DDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP 477
D G+ N SR LLM+KL R A NG LP+ + +P
Sbjct: 368 TDVAGVNFNNYSRDLLMRKLARQDEPAPTDKKTKSPAASNGK-------DLPL--RQKLP 418
Query: 478 VPAV-TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRV 535
T P+ MA S C++LKNMFDPA ET + +++ DV+ EC +KYG V
Sbjct: 419 EKVTKTLPLDVPMA-------SRCVVLKNMFDPAEETGDAWIKDLEDDVKTECENKYGHV 471
Query: 536 KHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
HI +D S G +Y++FE + A + ++ R+F R ISA
Sbjct: 472 VHIALDPNSQGEIYIKFEKVQGGEKAIQGLNGRFFGGRRISA 513
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 200/359 (55%), Gaps = 30/359 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + ++ +FF GKVRD L++D+++ RSKGV Y+EFY+V +V
Sbjct: 36 ERDKRTVFCMQLAARLRSHELVKFFEACGKVRDASLVIDKHTGRSKGVAYVEFYEVEAVS 95
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
A+ ++GQ LLG P++V+ +EAE+N V ++ T ++YVG+L +++TE
Sbjct: 96 KALEMTGQKLLGIPIIVQLTEAERNRVALQAASKTVDTAA-----SRIYVGSLDYSLTEQ 150
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ-LEHAKAAQSALNGKLEIVGRTLK 395
+ F+ FGP+E + + +D ETG KG+ FVQ+ + L ++ ++ +
Sbjct: 151 DVANAFQGFGPIEFINIHMDKETGHSKGYAFVQYVKDAWFLNIFILKLQIRVNLISEKSQ 210
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKLDRTGIATS-IAGSLGV 452
+ VT+ + A F+ DDG G +N+ SRA LM KL RT S + S+
Sbjct: 211 SAPVTNASNVGIASENIATFNMDDGEMEGFQMNSLSRAELMAKLARTEPTLSKTSASVAA 270
Query: 453 APAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME 512
N V + +PAV VP + + C+LLKNMF+P E
Sbjct: 271 IIFTNTYFVFDSS------TKPAVVVPTM---------------ETRCVLLKNMFNPENE 309
Query: 513 TDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFA 571
+ ++ EI+ DV+EEC+K+G++ HI VD S G VYL+F+S ++ +A +A+H R+FA
Sbjct: 310 VESNWVQEIEEDVKEECTKFGKILHISVDPESHGHVYLKFDSLVSSQAAVKALHGRFFA 368
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 212/414 (51%), Gaps = 80/414 (19%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
+P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 172 QPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFK 231
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGN 328
+ SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +LYVGN
Sbjct: 232 NEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HRLYVGN 287
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG +
Sbjct: 288 IHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FD 345
Query: 389 IVGRTLKV------------------------------------------SSVTDHVGTQ 406
+ GR ++V +S D G +
Sbjct: 346 LAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGAR 405
Query: 407 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 464
D ++ DD D GG+ N SR LM+KL RT PA S + ++
Sbjct: 406 DNEKGTGASALDDTDVGGVNFNNYSRDALMRKLART----------DEPPA---SVIPER 452
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
I P +PV NMA S C++L NMFDPA E ++ E++ D
Sbjct: 453 QILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIKELEDD 498
Query: 525 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 499 VREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 552
>gi|356514806|ref|XP_003526094.1| PREDICTED: uncharacterized protein LOC100782991 [Glycine max]
Length = 390
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 125/200 (62%), Gaps = 53/200 (26%)
Query: 197 MRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL---- 252
M + RR+++KKE EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK + +L
Sbjct: 94 MGDGRRFRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKNVECKLGFAK 153
Query: 253 ------------------------------IMDRNSR-------RSKGVG---------- 265
I D N + + G+
Sbjct: 154 FCGINAVGLSRGRKSLLKPIMAKEDHGASLIDDGNPKCQGHQVNKPNGINPSTALSAQPD 213
Query: 266 -YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA-TGPYGAIDRK 323
YIEFYD MSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN S G TG YGA+DRK
Sbjct: 214 LYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVTGSYGAVDRK 273
Query: 324 LYVGNLHFNMTETQLRKLFE 343
LYVGNLHFNMTE+QLR+ F
Sbjct: 274 LYVGNLHFNMTESQLREFFH 293
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 210/396 (53%), Gaps = 30/396 (7%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P D ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF +
Sbjct: 186 PTGD-ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKN 244
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKLYVGNLH 330
SV A+ L+GQ LLG PV+V+P+EAEKN N+ S+G + P+ +LYVGN+H
Sbjct: 245 EESVAAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIPF----HRLYVGNIH 300
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
F++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++
Sbjct: 301 FSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDASQAREALEKMNG-FDLA 358
Query: 391 GRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
GR ++V D + TA F + G A R L DR G S G+
Sbjct: 359 GRPIRVGLGNDKFTPESTANLLRGFQGQNQGSAFSGAGGRGLQASNFDRAGGRDSDKGTA 418
Query: 451 GVA------PAVNGSAVNQQAI-------SLPVVGQP--AVPVPAV-TAPVIPNMAAEFI 494
A VN + ++ A+ P GQP + P T P+ N++
Sbjct: 419 ASALDDTDVAGVNFNNYSRDALMRKLARTDEPSTGQPERQILKPKTETQPLPVNVSMA-- 476
Query: 495 GSPSECLLLKNMFDPAMETDPDFDLEI-QGDVEEECSKYGRVKHIYVDKRSAGFVYLRFE 553
S C++L NMFDP + + E+ + +E KYG V HI VD S G +YL+F+
Sbjct: 477 ---SRCVVLHNMFDPTEQEGEGWIKELEEEVRQEAEEKYGHVVHIAVDPNSQGDIYLKFD 533
Query: 554 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+A + ++ R+F R+ISA + Y + F
Sbjct: 534 KVSGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 569
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 213/423 (50%), Gaps = 82/423 (19%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+ P + ERD+RTVF Q+ + +D+ FF K G V++ +++ DR S RSKGVG
Sbjct: 195 KRSSSPPLTEDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGVG 254
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 323
Y+EF + SVP AI L+GQ L+G P++ + +EAEKN + + G P+ +
Sbjct: 255 YVEFKNEESVPAAIQLTGQKLMGIPIIAQLTEAEKNRQARTGDGNNGNNNGVPF----HR 310
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVGN+HF++TE+ L+ +FEPFG +E VQL + E G+ +G+GFVQF AK A +
Sbjct: 311 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKE-EGGRSRGYGFVQFRDPAQAKEALEKM 369
Query: 384 NGKLEIVGRTLKV---------------------------------------------SS 398
NG ++ GR ++V
Sbjct: 370 NG-FDLAGRPIRVGLGNDKFTPESTANLLQRFNGQGPPNFQGSAFSGSGGRGAHAGGSGG 428
Query: 399 VTDHVGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 455
D G +D A ++ DD D G+ N SR LM+KL RT PA
Sbjct: 429 TFDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPA 477
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 515
A Q+ I +PAV A T PV N A S C++LKNMFDPA E
Sbjct: 478 DTNGADKQKII------KPAVQA-ARTLPVSVNQA-------SRCVVLKNMFDPAEEEGE 523
Query: 516 DFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRL 574
+ E++ DV+EEC +KYG V HI +D + G +Y++F++ + +A + ++ R+F R
Sbjct: 524 SWMKELEDDVKEECQAKYGTVVHIALDPNTQGDIYVKFDTVQGGENAIKGLNGRFFGGRQ 583
Query: 575 ISA 577
I+A
Sbjct: 584 ITA 586
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 208/382 (54%), Gaps = 29/382 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + T R++Y+FF +AG VRD +++ D+ S RSKGV Y+EF SV
Sbjct: 236 ERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQ 295
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
AIALSG+ LLG PV+V+ +EAEKN + + +A P+ +L V N+HFN+
Sbjct: 296 AAIALSGKRLLGLPVIVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNL 351
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
T+ ++ +FEPFG +E V L D + + KGFG++Q+ A+ A +NG ++ GR
Sbjct: 352 TDEDVKAIFEPFGDIEFVHLQRD-DQNRSKGFGYIQYRNPISARNALEKMNG-FDLAGRN 409
Query: 394 LKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA 453
++V D T+ T++ FD+ L Q R+ Q R G +S S
Sbjct: 410 MRVCLGNDKFTTETTSSMLKRFDE------TLARQERS---QPSQRNG-GSSTYESQDYR 459
Query: 454 PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP-----SECLLLKNMFD 508
A S ++ S P+ + A + + N ++ + P S C LL+NMF+
Sbjct: 460 EAAPLSPTEEE--SRPITRDELMKKLARSEDISDN--SKLVSEPEPPIRSRCALLENMFN 515
Query: 509 PAMETDPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHM 567
PA ET P++ E++ DV+EEC KYG+V HI V G ++++FE+ + A A +H
Sbjct: 516 PAEETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQ 575
Query: 568 RWFARRLISAIFMKPEDYEAKF 589
RWF R I A + DY KF
Sbjct: 576 RWFGGRTIKASILPETDYYFKF 597
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 204/411 (49%), Gaps = 81/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 195 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 254
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++ + +EAEKN N A + P+ +LYVGN+HF++
Sbjct: 255 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYVGNIHFSI 310
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE+ L+ +FEPFG ++ VQL + ETG+ KG+GFVQF A+ A +NG ++ GR
Sbjct: 311 TESDLQNVFEPFGELDFVQLQRE-ETGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRP 368
Query: 394 LKV--------------------------SSVTDHVG--------------------TQD 407
++V SS + H G
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANVGGSSGGNFDRAGGRDNDK 428
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
A ++ DD D G+ N SR LM+KL RT PA + ++
Sbjct: 429 GAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDEKRKA- 476
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P A PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 477 ------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELEDDVRA 523
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 524 ECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 239/527 (45%), Gaps = 148/527 (28%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
ER+RR SS + E+E
Sbjct: 164 ERDRR---------------------------------SSSGKYEKES------------ 178
Query: 181 ERERERELRERERDLEMRESRRYKEK---KEVVEPEADP----ERDQRTVFAYQMPLKAT 233
R E+ + SRR EK E V PE P E D RTVF ++ K T
Sbjct: 179 --------RYPEKPYDKPISRRSPEKPAAAEPVLPEISPEEQEESDSRTVFVSKLSPKIT 230
Query: 234 ERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMV 293
E D+YEFF++AGKV V L++D+ ++R KGVGY+EF + V A+ L+GQ +L Q ++V
Sbjct: 231 ENDLYEFFAQAGKVLKVSLVIDKITKRLKGVGYVEFSEREMVEKAVLLTGQKVLNQSILV 290
Query: 294 KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
+EK A P + +LYVG L+ ++TE Q+R +F G +E V+
Sbjct: 291 HGIHSEK-------KATPVTKIPVHTNNSRLYVGYLNLSITEDQIRTIFSQHGDLEFVK- 342
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKS- 412
L ++ G K + FVQF E A+ A ALNG +E++G+ LKV V ++ GT ++S
Sbjct: 343 -LHVKPGLYK-YAFVQFKASESAQKALDALNG-VEVMGKNLKVVFVNEN-GTNKDLSQSN 398
Query: 413 --------------------------------------------------ADFDDDDGGG 422
D++D G
Sbjct: 399 MNNPNNIHNNNNHHHQRNMHFQQNNQNNLNNQNNQNNIARVMQQVYHQPMGSLDEED-GS 457
Query: 423 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 482
+ L Q++++L KL IA++ A ++ A + + NQ +P P P VT
Sbjct: 458 IPLTPQAQSILSAKLMGIPIASNGAHNVAAANVLANTVYNQ----IP-------PAPPVT 506
Query: 483 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 542
S C++LKNMFDP ET D+D EI+ DVE ECS YG VKHI++DK
Sbjct: 507 I-------------TSTCIVLKNMFDPDTETGDDWDKEIERDVELECSTYGNVKHIFLDK 553
Query: 543 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
S G++YL ++S E A++A ++ RWFA +++SA + Y AKF
Sbjct: 554 NSQGYIYLCYDSIEGASTAINKLNRRWFAGKMLSAESIPENIYFAKF 600
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 203/408 (49%), Gaps = 97/408 (23%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ FF K G VRD +++ DR S RSKG
Sbjct: 140 ERDRRTVFVQQLAARLRTRELIAFFEKVGPVRDAQVVKDRVSGRSKGA------------ 187
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGG-TATGPYGAIDRKLYVGNLHFN 332
+ LLG P++V+ +EAEKN ++ S+GG + P+ +LYVGN+HFN
Sbjct: 188 -------KRLLGIPIIVQLTEAEKNRQAKAEAMLSSGGRQSDAPF----HRLYVGNIHFN 236
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+TE LR++FEPFG +E VQL + +TG+ +G+GFVQ+ A+ A +NG E+ GR
Sbjct: 237 LTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRDPAQARDALEKMNG-FELAGR 295
Query: 393 TLKVSSVTDHVGTQDTAAKSADF-------------------------------DDDDGG 421
++V D + T+A A F DD++ G
Sbjct: 296 AIRVGLGNDKFTPESTSAVLARFSGFTGSAFENKNRGGTERIGGPRDGSSSVSLDDNEAG 355
Query: 422 GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAV 481
G++ N SR LM+KL R SI G+A P P PAV
Sbjct: 356 GVSFNNISRDALMRKLAREEGKESI----GLA--------------------PPKPTPAV 391
Query: 482 TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYV 540
S C+LLKNMF+P E+ ++ E++ DV+ EC +KYG+V HI+V
Sbjct: 392 QM-------------TSRCVLLKNMFNPQEESGDNWIRELEDDVKAECENKYGKVLHIHV 438
Query: 541 DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
++ S G VY++F++ A A + ++ RWF R ISA F+ Y AK
Sbjct: 439 EENSPGDVYIKFDNVVAGERAIQGLNGRWFGGRTISASFLIDAVYTAK 486
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 215/426 (50%), Gaps = 80/426 (18%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
+P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 173 QPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFK 232
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGN 328
+ SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +LYVGN
Sbjct: 233 NEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HRLYVGN 288
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG +
Sbjct: 289 IHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FD 346
Query: 389 IVGRTLKV------------------------------------------SSVTDHVGTQ 406
+ GR ++V +S D G +
Sbjct: 347 LAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPTTSNFDRAGAR 406
Query: 407 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 464
D ++ DD D G+ N SR LM+KL RT PA S + ++
Sbjct: 407 DNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---SVIPER 453
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
I P +PV NMA S C++L NMFDPA E ++ E++ D
Sbjct: 454 QILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIKELEDD 499
Query: 525 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 583
V EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A +
Sbjct: 500 VREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDA 559
Query: 584 DYEAKF 589
Y + F
Sbjct: 560 VYSSLF 565
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 199/383 (51%), Gaps = 51/383 (13%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 176 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKS 235
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
V A+ L+GQ LLG PV+V+ +EAEKN T + T P +LYVGN+HF
Sbjct: 236 EEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTES--TGHHPNSIPFHRLYVGNIHF 293
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF--------------AQLEHAK 377
++TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ Q H +
Sbjct: 294 SITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQYFTPESTANLLQRFQGQNHHQQ 352
Query: 378 AAQSALNGKLEIVGRTLKVSSVTDHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQ 435
SA +G G +S D G +D ++ DD D G+ N SR LM+
Sbjct: 353 FQGSAFSG----AGGRGPATSNFDRAGARDNEKGTGASALDDTDVAGVNFNNYSRDALMR 408
Query: 436 KLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIG 495
KL RT PA S V + I P +PV NMA
Sbjct: 409 KLART----------DEPPA---SVVPDRQILKPKTETKPLPVNV-------NMA----- 443
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFES 554
S C++L NMFDPA E D+ E++ DV EE +KYG V HI +D SAG +YL+F+
Sbjct: 444 --SRCVVLHNMFDPAEEEGEDWIKELEDDVREEAEAKYGHVVHISLDPNSAGDIYLKFDK 501
Query: 555 TEAAASAQRAMHMRWFARRLISA 577
+ +A + ++ R+F R+I+A
Sbjct: 502 VQGGENAIKGLNGRYFGGRMITA 524
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 215/426 (50%), Gaps = 80/426 (18%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
+P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 173 QPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFK 232
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGN 328
+ SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +LYVGN
Sbjct: 233 NEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HRLYVGN 288
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG +
Sbjct: 289 IHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FD 346
Query: 389 IVGRTLKV------------------------------------------SSVTDHVGTQ 406
+ GR ++V +S D G +
Sbjct: 347 LAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGAR 406
Query: 407 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 464
D ++ DD D G+ N SR LM+KL RT PA S + ++
Sbjct: 407 DNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---SVIPER 453
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
I P +PV NMA S C++L NMFDPA E ++ E++ D
Sbjct: 454 QILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIKELEDD 499
Query: 525 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 583
V EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A +
Sbjct: 500 VREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITAAPVVDA 559
Query: 584 DYEAKF 589
Y + F
Sbjct: 560 VYSSLF 565
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 203/409 (49%), Gaps = 80/409 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF SV
Sbjct: 172 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEESVA 231
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++T
Sbjct: 232 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HRLYVGNIHFSIT 287
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L+ +FEPFG +E VQL D E G+ KG+GFVQF A+ A +NG ++ GR +
Sbjct: 288 ENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRAI 345
Query: 395 KV-------------------------------------------SSVTDHVGTQDT--A 409
+V +S D G +D+
Sbjct: 346 RVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSEKG 405
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
A ++ DD D G+ N SR LM+KL RT A A ++Q + P
Sbjct: 406 AGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA------------ADDKQKVLRP 453
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+PV NMA S C+LL+NMFDPA E + E++ DV EC
Sbjct: 454 KTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGEAWIKELEDDVRAEC 499
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 500 EDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|403359392|gb|EJY79355.1| Splicing factor, putative [Oxytricha trifallax]
Length = 508
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 227/461 (49%), Gaps = 87/461 (18%)
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADP-------------------- 216
E ER + R+R +E +RD K+ EPE DP
Sbjct: 86 EEERRKNRDRNGKEGDRD----------GKEPNAEPEIDPVKKQEEALLKQIEEAKRQAE 135
Query: 217 --ERDQRTVFAYQMPLKATERDVYEFFSK---AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
+RD TV ++ L A ERD+Y FFSK GK+RDVRLI D+ S +SKG+ Y+EFY
Sbjct: 136 ESQRDDCTVLVNRIALHANERDMYNFFSKEKGVGKIRDVRLIRDQRSGKSKGIAYVEFYT 195
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT----------SAGGTATGPYGAID 321
SV +A+ALSG +GQ +M++ S+AEKN + + + G P +D
Sbjct: 196 PESVLLAMALSGTQFMGQTIMIQASQAEKNRAAAASKYKKEQDRFGNLGNPKPQPQKKVD 255
Query: 322 --RKLYVGNLH--FN-MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+++VG L N + E +R F PFG +E ++LP D TG+ KG + + + ++A
Sbjct: 256 LENQVFVGGLIDVLNQVNEQDIRGWFTPFGDIETIELPKDHITGRNKGHAIITYRKHKYA 315
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFD--DDDGGGLALNAQSRALLM 434
+ A +NG +I GR LKV +T+ + D+D DD +AQSRALLM
Sbjct: 316 RTAVKEMNG-FDINGRKLKVQIMTEANSKLMNQRGAGDYDLEDDSANQYIHSAQSRALLM 374
Query: 435 QKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 494
QKL R S+ N +AV Q A ++
Sbjct: 375 QKLSRESNKQDSGQSIMAQNYNNHAAVQQYAQAM-------------------------- 408
Query: 495 GSPSECLLLKNMFDPA---METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLR 551
PS C+LL NMFDP ++ DP + ++++ VE+ CS++G+V+ ++V+ ++AG +++
Sbjct: 409 --PSNCVLLNNMFDPTGVDLKKDPAYFIDVKEQVEDVCSEFGKVEKVWVE-QAAGNCWVK 465
Query: 552 FEST--EAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
F + A +Q ++ R+F RLI+A F+ + K K
Sbjct: 466 FNKNDIQGAQRSQMTLNQRYFDGRLITANFVPENVFYGKVK 506
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 209/395 (52%), Gaps = 29/395 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVGY+EF SV
Sbjct: 171 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESVA 230
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKLYVGNLHFNMTE 335
A+ L+GQ LLG PV+V+P+EAEKN S G T P+ +LYVGN+HF++TE
Sbjct: 231 AALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVGNIHFSITE 286
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++ GR ++
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNG-FDLAGRPIR 344
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDG----GGLALNAQSRALLMQK---LDRTGIATSIAG 448
V D + TA F +G G A + + DR G + G
Sbjct: 345 VGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKG 404
Query: 449 SLGVA------PAVNGSAVNQQAI--SLPVVGQPAVPVP--AVTAP---VIPNMAAEFIG 495
S A VN + ++ A+ L +P+ P + P V P + +
Sbjct: 405 SGASALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQPERQILKPRTEVKP-LPINNVN 463
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFES 554
S C++L NMFDPA E D+ E++ DV +E KYG V HI +D S G +YL+F+
Sbjct: 464 QASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPNSQGDIYLKFDR 523
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ +A + ++ R+F R+I+A + Y + F
Sbjct: 524 VQGGENAIKGLNGRYFGGRMITAAPVVDAFYSSLF 558
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 203/409 (49%), Gaps = 80/409 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF SV
Sbjct: 172 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEESVA 231
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++T
Sbjct: 232 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HRLYVGNIHFSIT 287
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L+ +FEPFG +E VQL D E G+ KG+GFVQF A+ A +NG ++ GR +
Sbjct: 288 ENDLQNVFEPFGELEFVQLQKD-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRAI 345
Query: 395 KV-------------------------------------------SSVTDHVGTQDT--A 409
+V +S D G +D+
Sbjct: 346 RVGLGNDKFTPDSSAQRSQSHGANQPNFQGSSFSGQGGRGIQAGGTSNFDRAGGRDSEKG 405
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
A ++ DD D G+ N SR LM+KL RT A A ++Q + P
Sbjct: 406 AGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA------------ADDKQKVLRP 453
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+PV NMA S C+LL+NMFDPA E + E++ DV EC
Sbjct: 454 KTETKPLPVNV-------NMA-------SRCVLLRNMFDPAEEEGEAWIKELEDDVRAEC 499
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 500 EDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 213/399 (53%), Gaps = 33/399 (8%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P D ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF +
Sbjct: 181 PTGD-ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKN 239
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT-SAGGTATGPYGAIDRKLYVGNLH 330
SV A+ L+GQ LLG PV+V+P+EAEKN NT S+G + P+ +LYVGN+H
Sbjct: 240 EESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNSVPF----HRLYVGNIH 295
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
F++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++
Sbjct: 296 FSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMNG-FDLA 353
Query: 391 GRTLKVSSVTDHVGTQDTAAKSADFDDDD---GGGLALNAQSRALLMQKLDRTGIATSIA 447
GR ++V D + TA F + G A R + DR G S
Sbjct: 354 GRPIRVGLGNDKFTPESTANLLRGFQGQNQQYQGSAFSGAGGRGPQVSNFDRAGGRDSDK 413
Query: 448 GSLGVA------PAVNGSAVNQQAI-------SLPVVGQP--AVPVPAV-TAPVIPNMAA 491
G+ A VN + ++ A+ P GQP + P T P+ N++
Sbjct: 414 GTGASALDDTDVAGVNFNNYSRDALMRKLARTDEPTNGQPERQILKPKTETKPMPVNVSM 473
Query: 492 EFIGSPSECLLLKNMFDPAMETDPDFDLEI-QGDVEEECSKYGRVKHIYVDKRSAGFVYL 550
S C++L NMFDPA + D+ E+ + +E KYG V HI VD S G +YL
Sbjct: 474 A-----SRCVVLHNMFDPAEQEGEDWAKELEEEVRQEAEEKYGHVVHIAVDTNSQGDIYL 528
Query: 551 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+F+ + +A + ++ R+F R+ISA + Y + F
Sbjct: 529 KFDKVQGGENAIKGLNGRYFDGRMISAAPVVDAVYSSLF 567
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 211/414 (50%), Gaps = 80/414 (19%)
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
+P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 173 QPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFK 232
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGN 328
+ SV A+ L+GQ LLG PV+V+ +EAEKN + + TS + P+ +LYVGN
Sbjct: 233 NEDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPF----HRLYVGN 288
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+HF++TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG +
Sbjct: 289 IHFSITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FD 346
Query: 389 IVGRTLKV------------------------------------------SSVTDHVGTQ 406
+ GR ++V +S D G +
Sbjct: 347 LAGRPIRVGLGNDKFTPESTANLLQRFQGQNHHQQFQGSAFSGAGGRGPATSNFDRAGAR 406
Query: 407 DT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 464
D ++ DD D G+ N SR LM+KL RT PA S + ++
Sbjct: 407 DNEKGTGASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---SVIPER 453
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
I P +PV NMA S C++L NMFDPA E ++ E++ D
Sbjct: 454 QILKPKTETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGENWIKELEDD 499
Query: 525 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V EE +KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 500 VREEAEAKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 553
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 213/437 (48%), Gaps = 79/437 (18%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
K ++ P + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKG
Sbjct: 161 KGSRDGTPPLTEDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKG 220
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
VGY+EF + SV AI L+GQ LLG P++ + +EAEKN + +A + P +
Sbjct: 221 VGYVEFKNEESVAAAIQLTGQKLLGIPIIAQLTEAEKN--RQVRTAEPASNNPNQIPFHR 278
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVGN+HF++TE L+ +FEPFG +E VQL + + G+ +G+GFVQF A+ A +
Sbjct: 279 LYVGNIHFSITEGDLQNVFEPFGELEFVQLQKE-DQGRSRGYGFVQFRDPHQAREALEKM 337
Query: 384 NGKLEIVGRTLKVSSVTDHVGTQDTAA--------------------------------- 410
NG ++ GR ++V D + TA+
Sbjct: 338 NG-FDLAGRPIRVGLGNDKFTPESTASLLQRFQGQSHQQQFQGSAFSGAGGRGPQASGGG 396
Query: 411 -----------------KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVA 453
++ DD D GG+ N SR LM+KL RT A
Sbjct: 397 GGAFDRAGGRDNDKGAGGASALDDTDVGGVNFNNYSRDALMRKLARTDEP---------A 447
Query: 454 PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMET 513
PA NG ++ A P V P I + + S C++L+NMFDPA ET
Sbjct: 448 PATNGRDDRREV---------AKPRTEVKPPPI------NVNTASRCVVLRNMFDPAEET 492
Query: 514 DPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 572
+++ E++ DV E KYG V HI +D S G +YL+F+ + +A + ++ R+F
Sbjct: 493 GENWEKELEDDVRAEAEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIQGLNGRYFGG 552
Query: 573 RLISAIFMKPEDYEAKF 589
R+ISA + Y F
Sbjct: 553 RMISATPVVDAVYSTMF 569
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 205/383 (53%), Gaps = 29/383 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVGY+EF SV
Sbjct: 171 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESVA 230
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKLYVGNLHFNMTE 335
A+ L+GQ LLG PV+V+P+EAEKN S G T P+ +LYVGN+HF++TE
Sbjct: 231 AALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVGNIHFSITE 286
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++ GR ++
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNG-FDLAGRPIR 344
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDG----GGLALNAQSRALLMQK---LDRTGIATSIAG 448
V D + TA F +G G A + + DR G + G
Sbjct: 345 VGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKG 404
Query: 449 SLGVA------PAVNGSAVNQQAI--SLPVVGQPAVPVP--AVTAP---VIPNMAAEFIG 495
S A VN + ++ A+ L +P+ P + P V P + +
Sbjct: 405 SGASALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQPERQILKPRTEVKP-LPINNVN 463
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFES 554
S C++L NMFDPA E D+ E++ DV +E KYG V HI +D S G +YL+F+
Sbjct: 464 QASRCVVLHNMFDPAEEEGDDWVKELEEDVRQEAEEKYGHVVHISLDPNSQGDIYLKFDR 523
Query: 555 TEAAASAQRAMHMRWFARRLISA 577
+ +A + ++ R+F R+I+A
Sbjct: 524 VQGGENAIKGLNGRYFGGRMITA 546
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 203/411 (49%), Gaps = 81/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 197 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 256
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++ + +EAEKN N A + P+ +LYVGN+HF++
Sbjct: 257 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYVGNIHFSI 312
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +NG ++ GR
Sbjct: 313 TESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRP 370
Query: 394 LKV--------------------------SSVTDHVG--------------------TQD 407
++V SS + H G
Sbjct: 371 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGNFDRAGGRDNDK 430
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
A ++ DD D G+ N SR LM+KL RT PA + ++
Sbjct: 431 GAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDEKRKA- 478
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P A PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 479 ------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELEDDVRA 525
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 526 ECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 576
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 206/409 (50%), Gaps = 77/409 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 198 ERDRRTVFVQQLAARLRTKELIAFFEKIGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 257
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTE 335
+AI L+GQ LLG P++ + +EAEKN N + A + AI +LYVGN+HF++TE
Sbjct: 258 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDS--HANSNHQAIPFHRLYVGNIHFSITE 315
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +NG ++ GR ++
Sbjct: 316 SDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRPIR 373
Query: 396 V--------------------------SSVTDH-----------------VGTQDT---A 409
V SS + H G +D A
Sbjct: 374 VGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANSGGSSGGNFDRAGGRDNDKGA 433
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
++ DD D G+ N SR LM+KL RT PA + ++
Sbjct: 434 GGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDEKRK---- 478
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
P A PV NMA S C+LL+NMFDPA E + E++ DV EC
Sbjct: 479 ---APKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELEDDVRAEC 528
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 529 EEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 577
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 203/411 (49%), Gaps = 81/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 195 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 254
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++ + +EAEKN N A + P+ +LYVGN+HF++
Sbjct: 255 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYVGNIHFSI 310
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +NG ++ GR
Sbjct: 311 TESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRP 368
Query: 394 LKV--------------------------SSVTDHVG--------------------TQD 407
++V SS + H G
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANTGGSSGGNFDRAGGRDNDK 428
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
A ++ DD D G+ N SR LM+KL RT PA + ++
Sbjct: 429 GAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDEKRKA- 476
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P A PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 477 ------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELEDDVRA 523
Query: 528 ECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 524 ECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 165/273 (60%), Gaps = 22/273 (8%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+E + ++ PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG
Sbjct: 136 REPETILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKG 192
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAID 321
+ Y+EF D+ SVP+AI L+GQ LLG P++V+ S+AEKN SN G GP
Sbjct: 193 IAYVEFCDIQSVPLAIGLTGQRLLGVPIIVQVSQAEKNRLAAMSNNLQRGNP-GPM---- 247
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+LYVG+LHFN+TE LR +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A
Sbjct: 248 -RLYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALE 306
Query: 382 ALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG---GGLALNAQSRALLMQKL- 437
LNG E+ GR +KV VTDH+ A F D D G+ L A R LM KL
Sbjct: 307 QLNG-FELAGRPMKVGHVTDHL----EGGGEASFLDSDELERTGIDLGATGRLQLMAKLA 361
Query: 438 DRTGIATSIA--GSLGVAPAVNGSAVNQQAISL 468
+ TG+ +A +L + A+ +A+N +L
Sbjct: 362 EGTGLQIPLAAQAALQLGGAIPLTALNPTLTAL 394
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 232/479 (48%), Gaps = 86/479 (17%)
Query: 156 RRSS------------SRSRRERERESERERELELERERERERELRERERDLEMRESRRY 203
RSS +RSR + R + + R R + S
Sbjct: 128 YRSSGGDYYRGGGRARTRSRSPHDDRYYRPSGRSRRDDDRDDDRRRSRRDKDGRKRSLSA 187
Query: 204 KEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 262
K + + EP+ + ERD+RTVF Q+ + +++ FF KAG V+D +++ DR S RSK
Sbjct: 188 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 247
Query: 263 GVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID- 321
GVGY+EF + SVP+AI L+GQ LLG P++ + +EAEKN NT G +G +I
Sbjct: 248 GVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTE--GHVSGNQNSIPF 305
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+LYVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A+ A
Sbjct: 306 HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQAREALE 364
Query: 382 ALNGKLEIVGRTLKVSSVTDHV--------------GTQDT----------AAKSADF-- 415
+NG ++ GR ++V D G Q++ A +F
Sbjct: 365 KMNG-FDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALGGNFDR 423
Query: 416 ----------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 459
DD D G+ N SR LM+KL RT PA + +
Sbjct: 424 AGGRDNDKGVGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAADTT 472
Query: 460 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 519
A +++ P A P+ PV NMA S C+LL+NMFDP E +
Sbjct: 473 ADDKR--KAPKARPEAKPL-----PVSVNMA-------SRCVLLRNMFDPTEEEGDSWVK 518
Query: 520 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 519 ELEDDVRAECEEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 577
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/448 (32%), Positives = 217/448 (48%), Gaps = 106/448 (23%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIE 268
PE D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR +RRSKGVGY+E
Sbjct: 247 PEID-DYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTRRSKGVGYVE 305
Query: 269 FYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGG-TATGPYGAI----- 320
F VP AI L+G +L G P++V+ ++A N + Q + AG + P+ A+
Sbjct: 306 FAARELVPKAIELTGTILFGIPIVVQRTDAAHNGGVYQGSGDAGARHGSAPHPAVAAPQL 365
Query: 321 ------------------------------------------DRKLYVGNLHFNMTETQL 338
+ +LYVG+LHF++T+ +
Sbjct: 366 DPRVLANAPLPMQYHTAGAPIHLGAAPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENV 425
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
+ +FEPFG +E V L + TG+ KGF F+QF E AK A +NG + + R ++V +
Sbjct: 426 KAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKYPEDAKKALEQMNGFV-LAERAIRVGN 484
Query: 399 VT----------------DHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 442
V D G ++ F DDGGG LN + RA LM+KL R
Sbjct: 485 VNAKGSGGGSSYSSGSGQDSQGDGHLPQLTSAF--DDGGGAGLNPERRAALMEKLARNN- 541
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 502
P+ + S V A P IP S S LL
Sbjct: 542 ----------EPSASASEVTTVAQERPA--------------GIPE-------STSTSLL 570
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASA 561
LKNMF+PA ET+PD+D ++ DV+EEC +KYGRV I+V+K SAG +Y+ F +A+ A
Sbjct: 571 LKNMFNPAEETEPDWDTDLAEDVKEECQAKYGRVTSIHVEKESAGEIYVTFADLDASRKA 630
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKF 589
++ R+F + ISA ++ +AK
Sbjct: 631 LDGLNGRFFGGKPISAQYIPDAFVQAKL 658
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 203/410 (49%), Gaps = 75/410 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 175 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGVGYVEFKS 234
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
+V A+ L+GQ LLG PV+V+ +EAEKN N + T+ P +LYVGN+HF
Sbjct: 235 EDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDS--TSGHPNSIPFHRLYVGNIHF 292
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
N+TE L+ +FEPFG +E VQL D + G+ +G+GFVQF A+ A +NG ++ G
Sbjct: 293 NVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQFRDAGQAREALEKMNG-FDLAG 350
Query: 392 RTLKVS----------------------------------------SVTDHVGTQD---T 408
R ++V S D G +D T
Sbjct: 351 RPIRVGLGNDKFTPESTANLMHKFSGNNQGGFQGSAFSGAGGRGQQSTFDRAGGRDSEKT 410
Query: 409 AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL 468
SA DD D G+ N SR LM+KL RT A + NG+ QQ +
Sbjct: 411 GGASA-LDDTDVAGVNFNNYSRDALMRKLARTDEAPT-----------NGNEERQQILKP 458
Query: 469 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEE 528
+P PV NMA S C++L NMFD E D+ E++ +V +E
Sbjct: 459 KTETKP--------LPVNVNMA-------SRCVVLHNMFDATEEEGDDWVKELEDEVRQE 503
Query: 529 C-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
+YG V HI VD S G +YL+F+ + +A + ++ R+F R+I A
Sbjct: 504 AEQRYGHVVHISVDPNSKGDIYLKFDKVQGGENAIKGLNGRYFGGRMIDA 553
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 202/411 (49%), Gaps = 81/411 (19%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 195 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 254
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++ + +EAEKN N A + P+ +LYVGN+HF++
Sbjct: 255 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPDAHSNNNQQSIPF----HRLYVGNIHFSI 310
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +NG ++ GR
Sbjct: 311 TESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNG-FDLAGRP 368
Query: 394 LKV--------------------------SSVTDHVG--------------------TQD 407
++V S + H G
Sbjct: 369 IRVGLGNDKFSHDPAQLMQRLQQQGHNQGSPYSHHGGRGANAGGSSGGNFDRAGGRDNDK 428
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
A ++ DD D G+ N SR LM+KL RT PA + ++
Sbjct: 429 GAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDEKRKA- 476
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEE 527
P A PV NMA S C+LL+NMFDPA E + E++ DV
Sbjct: 477 ------PKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELEDDVRA 523
Query: 528 EC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 524 ECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 574
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 197/393 (50%), Gaps = 69/393 (17%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 108 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 167
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI 320
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+
Sbjct: 168 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQ----------------------- 204
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
+E +QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 205 ---------------------------IESIQLMMDSETGRSKGYGFITFSDSECAKKAL 237
Query: 381 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL- 437
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 238 EQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLA 293
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP 497
+ TG L + PA + +++ V + T AA
Sbjct: 294 EGTG--------LQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLA 345
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 346 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIA 405
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 406 AAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 438
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 205/435 (47%), Gaps = 101/435 (23%)
Query: 187 ELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 246
+L E ERD+RTVF Q+ + R++ EFF K G
Sbjct: 161 QLTED-------------------------ERDRRTVFVQQLAARLRTRELKEFFEKVGP 195
Query: 247 VRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 306
V + +++ DR S RSKGVGY+EF D SV A+ L+GQ LLG PV+V+ +EAEKN N
Sbjct: 196 VTEAQIVKDRISGRSKGVGYVEFKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARN 255
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFG 366
T AGG P +LYVGN+HFN+TE LR +FEPFG +E VQL D E+ + +G+G
Sbjct: 256 TEAGGPH--PNHVPFHRLYVGNIHFNVTEEDLRAVFEPFGELEFVQLQKD-ESDRSRGYG 312
Query: 367 FVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA----------------- 409
FVQF A+ A +NG ++ GR ++V D + TA
Sbjct: 313 FVQFRDATQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNSSNQQGS 371
Query: 410 --------------------------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIA 443
++ DD D GG+ N SR LM+KL RT
Sbjct: 372 SFSGSGGRGGQNSNFDRAGARDSEKTGGASALDDTDVGGVNFNNYSRDALMRKLARTD-- 429
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
S GS ++ + P + +PV TA S C++L
Sbjct: 430 ESNKGS------------EERPVLKPRTEKKPLPVNVNTA--------------SRCVVL 463
Query: 504 KNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
NMF+P E D+ E++ DV +E KYGRV HI VD S G +YL+FE + +A
Sbjct: 464 HNMFNPDEEEGDDWVKELEDDVRQEAEDKYGRVVHISVDPNSKGDIYLKFEKVQGGENAI 523
Query: 563 RAMHMRWFARRLISA 577
R ++ R+F R+I A
Sbjct: 524 RGLNGRYFGGRMIDA 538
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 223/432 (51%), Gaps = 77/432 (17%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+ P + ERD+RTVF Q+ + R++ +FF KAG V + +++ DR S RSKGVGY+EF
Sbjct: 198 MPPLTEDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEF 257
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSA--GGTATG-PYGAIDRKLY 325
SV A+ L+GQ LLG PV+V+ +EAEKN V+S A G +TG P+ +LY
Sbjct: 258 RSEESVTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVPF----HRLY 313
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HF++TE+ LR +FEPFG +E VQL D +TG+ +G+GFVQF + A+ A +NG
Sbjct: 314 VGNIHFSITESDLRNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDSDQAREALEKMNG 372
Query: 386 KLEIVGRTLKVSSVTDHVGTQDTA------------------------------------ 409
++ GR ++V D + TA
Sbjct: 373 -FDLAGRPIRVGLGNDKFTPESTANLMKGFQGRDQQQQHQGSAFSGSGGRGQNASNFDRA 431
Query: 410 --------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 461
+ + DD D G+ N SR LM+KL R +++ G +A
Sbjct: 432 GGRDNDKGSGAGALDDTDVAGVNFNNYSRDALMRKLARADDSSAN----GTGGGSTSAAA 487
Query: 462 NQQAISLPVVGQP---AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 518
++Q P++ +P A P+P V NMA S C++L NMFD + E ++
Sbjct: 488 DEQ--QRPIL-KPRTEAKPLP-----VNVNMA-------SRCVVLHNMFDTSEEEGEEWI 532
Query: 519 LEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
E++ DV +E KYG V H+ +D S G +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 533 KELEDDVRQEAEEKYGHVVHVALDPNSIGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 592
Query: 578 IFMKPEDYEAKF 589
+ Y + F
Sbjct: 593 APVVDAVYSSLF 604
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 213/433 (49%), Gaps = 86/433 (19%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K++ EP D ERD+RTVF Q+ + +++ FF G V + +++ DR S RSKGVG
Sbjct: 233 KRKSPEP-TDDERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVG 291
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
Y+EF D SV AI L+GQ LLG P++ + +EAEKN +T GTAT G +LY
Sbjct: 292 YVEFKDEESVQKAIQLTGQKLLGIPIIAQLTEAEKNRQARHTE--GTATQSNGIPFHRLY 349
Query: 326 VGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
VGN+HF++TE L+ +FEPFG +E VQL + E G+ KG+GFVQF AK A +NG
Sbjct: 350 VGNIHFSITEDDLKNVFEPFGELEFVQLQKE-EQGRSKGYGFVQFIDPAQAKEALEKMNG 408
Query: 386 KLEIVGRTLKVSSVTD------------------------------------HVGTQ--- 406
E+ GR ++V D H G Q
Sbjct: 409 -FELAGRPIRVGLGNDKFTPESTQSLLQRFASQGQAAAFQGSSFSGMGGRGAHAGGQANF 467
Query: 407 --------DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 458
D ++ DD D G+ + SR LM+KL RT + VAP
Sbjct: 468 DRASGRDADKTGGASALDDTDVAGVNFSNYSRDALMRKLARTDDSEE-----KVAP---- 518
Query: 459 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFD 518
Q+ + P V QPA PS C+LLKN+++ A ET+P +
Sbjct: 519 -KTMQKKPTGP-VDQPA---------------------PSRCVLLKNVYNQAEETEPGWQ 555
Query: 519 LEIQGDVEEECS-KYGRVKHIYVD-KRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
E++ DV+ EC KYG+V HI + + G +Y++F+ + +A R ++ R + R+I+
Sbjct: 556 KELEEDVKVECDEKYGQVVHIGLALDNNDGEIYIKFDRKQGGENAIRGLNGRMYGGRMIT 615
Query: 577 AIFMKPEDYEAKF 589
A ++ Y F
Sbjct: 616 AQYVVDAVYNMNF 628
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 165/274 (60%), Gaps = 26/274 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAV 461
L + TG+ A ++GSL S V
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFV 396
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 211/428 (49%), Gaps = 87/428 (20%)
Query: 198 RESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R R E E ERD+RT+F Q+ + +++ FF K G V++ +++ DR
Sbjct: 164 RSRERTPEPTE-------DERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRV 216
Query: 258 SRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATG 315
S RSKGVGY+EF SV AI L+GQ LLG P++ + +EAEKN N S+G
Sbjct: 217 SGRSKGVGYVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAA 276
Query: 316 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
P+ +LYVGN+HF++TE+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF
Sbjct: 277 PF----HRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQ 331
Query: 376 AKAAQSALNGKLEIVGRTLKV--------------------------------------- 396
A+ A +NG ++ GR ++V
Sbjct: 332 AREALEKMNG-FDLAGRAIRVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGV 390
Query: 397 ----SSVTDHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
+S D G +D+ A ++ DD D G+ N SR LM+KL RT + A
Sbjct: 391 QAGGTSNFDRAGGRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPSEPA--- 447
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
A +QQ + P A P+ PV NMA S C++L+NMFDP
Sbjct: 448 ---------ADDQQKVLRPKT--EAKPL-----PVNVNMA-------SRCVMLRNMFDPN 484
Query: 511 METDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
E + E++ DV EC KYG V HI +D S G +YL+F+ + +A + ++ R+
Sbjct: 485 EEEGEAWIKELEDDVRAECEDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRF 544
Query: 570 FARRLISA 577
F R I+A
Sbjct: 545 FGGRQITA 552
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 231/488 (47%), Gaps = 90/488 (18%)
Query: 149 RRSSSQSRRSSSRSRRERERESEREREL-ELERERERERE-----LRERERDLEMRESRR 202
R S R R+ R R R +R R R ER+ R S
Sbjct: 126 RSSGGDYYRGGGRTTRSRSRSPFDDRYYRPTGRPRHDERDDDKRTSRRDRDGRRRSPSGG 185
Query: 203 YKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+ EP+ + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RS
Sbjct: 186 RGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 245
Query: 262 KGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYG 318
KGVGY+EF D SVP+AI L+GQ LLG P++ + +EAEKN N A G + P+
Sbjct: 246 KGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF- 304
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+
Sbjct: 305 ---HRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQARE 360
Query: 379 AQSALNGKLEIVGRTLKV------------------------------SSVTDHVGTQDT 408
A +NG ++ GR ++V S + H G
Sbjct: 361 ALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQ 419
Query: 409 AAKSADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
A S +F DD D G+ N SR LM+KL RT
Sbjct: 420 AGGSGNFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD--------- 470
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
PAV ++ + P + A P+ PV NMA S C+LL+NMFDPA
Sbjct: 471 --EPAVEPKPDEKRKVPKPQLN--AKPL-----PVTVNMA-------SRCVLLRNMFDPA 514
Query: 511 METDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
E + E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+
Sbjct: 515 EEEGDGWIKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRF 574
Query: 570 FARRLISA 577
F R ISA
Sbjct: 575 FGGRQISA 582
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/285 (44%), Positives = 172/285 (60%), Gaps = 27/285 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSA-VNQQAISLPVV 471
L + TG+ A ++GSL + ++QQ +L V+
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEALFVI 407
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 177/311 (56%), Gaps = 26/311 (8%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 250
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 251 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 306
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 307 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 362
Query: 437 L-DRTGI--------ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
L + TG+ A ++GSL + Q ++ VP+P
Sbjct: 363 LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEGKMITAAYVPLPTYHNLFPD 422
Query: 488 NMAAEFIGSPS 498
+M A + PS
Sbjct: 423 SMTATQLLVPS 433
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 231/488 (47%), Gaps = 90/488 (18%)
Query: 149 RRSSSQSRRSSSRSRRERERESEREREL-ELERERERERE-----LRERERDLEMRESRR 202
R S R R+ R R R +R R R ER+ R S
Sbjct: 126 RSSGGDYYRGGGRTTRSRSRSPFDDRYYRPTGRPRHDERDDDKRTSRRDRDGRRRSPSGG 185
Query: 203 YKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+ EP+ + ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RS
Sbjct: 186 RGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRS 245
Query: 262 KGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYG 318
KGVGY+EF D SVP+AI L+GQ LLG P++ + +EAEKN N A G + P+
Sbjct: 246 KGVGYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEANVSGNQNSIPF- 304
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVGN+HF++TE+ L+K+FEPFG ++ VQL + E G+ +G+GFVQF A+
Sbjct: 305 ---HRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE-EGGRSRGYGFVQFRDPNQARE 360
Query: 379 AQSALNGKLEIVGRTLKV------------------------------SSVTDHVGTQDT 408
A +NG ++ GR ++V S + H G
Sbjct: 361 ALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGQGAHHNFQGSLFSGHGGRGAQ 419
Query: 409 AAKSADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
A S +F DD D G+ N SR LM+KL RT
Sbjct: 420 AGGSGNFDRAGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD--------- 470
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
PAV ++ + P + A P+ PV NMA S C+LL+NMFDPA
Sbjct: 471 --EPAVEPKPDEKRKVPKPQLN--AKPL-----PVTVNMA-------SRCVLLRNMFDPA 514
Query: 511 METDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
E + E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+
Sbjct: 515 EEEGDGWIKELEDDVRAECEEKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRF 574
Query: 570 FARRLISA 577
F R ISA
Sbjct: 575 FGGRQISA 582
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 200/405 (49%), Gaps = 76/405 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ FF K G V + +++ DR S RSKGVGY+EF + SV
Sbjct: 155 ERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSKGVGYVEFKNEDSVA 214
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
A+ L+GQ LLG PV+V+ +EAEKN T GG+ P +LYVGN+HFN+TE
Sbjct: 215 PALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSH--PNHVPFHRLYVGNIHFNVTEQ 272
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L+ +F+PFG +E VQL D ET + +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 273 DLQAVFDPFGELEFVQLQKD-ETNRSRGYGFVQFRDAGQAREALEKMNG-FDLAGRPIRV 330
Query: 397 SSVTDHVGTQDTA-------------------------------------------AKSA 413
D + TA ++
Sbjct: 331 GLGNDKFTPESTANMLQRFSGQNASNQQGSSFSGSGGRGGQNSNFDRAGARDSEKTGGAS 390
Query: 414 DFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQ 473
DD D GG+ N SR LM+KL RT N+ + PV+ +
Sbjct: 391 ALDDTDVGGVNFNNYSRDALMRKLART------------------DESNKGSDERPVL-K 431
Query: 474 PAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS-KY 532
P T P+ N + + S C++L NMF+P E D+ E++ DV +E KY
Sbjct: 432 PRTE----TKPLPMN-----VNTASRCVVLHNMFEPDEEEGDDWVKELEDDVRQEAEEKY 482
Query: 533 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
G V HI VD S G +YL+F+ + +A R ++ R+F R+I A
Sbjct: 483 GHVVHISVDPNSKGDIYLKFDKVQGGENAIRGLNGRYFGGRMIDA 527
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 264/571 (46%), Gaps = 89/571 (15%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDR------GRERERETERDRERSRERRE 117
+ DE NGSR +R +R R G E + + DR +
Sbjct: 29 KSHDESNGSRSERRDRDRDLDRERKRRDRSRERRHERDADGDEEMKSPKSDRASANGSNR 88
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
K R+ R R+R+ D R S R ++ R SRSR + R
Sbjct: 89 SRKRSRSRDSGKRHSRRDRD-DPYRSSGGDYYRGPGRTTR--SRSRSPYDDRYYRPTGRS 145
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERD 236
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + ++
Sbjct: 146 RRDERDDDRRSSKRDRDGRRRSPSSSRRRSRSPEPQLTEDERDRRTVFVQQLAARLRTKE 205
Query: 237 VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 296
+ FF K G V++ +++ DR S RSKGVGY+EF + SVP+AI L+GQ LLG P++ + +
Sbjct: 206 LIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLT 265
Query: 297 EAEKNLVQSNTSAGGTATGPYGAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
EAEKN N A +G +I +LYVGN+HF++TE+ L+K+FEPFG ++ VQL
Sbjct: 266 EAEKNRQARNPEA--NVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQK 323
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV------------------- 396
+ E G+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 324 E-EGGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRF 381
Query: 397 -----------SSVTDHVGTQDTAAKSADF------------------DDDDGGGLALNA 427
S + H G A S F DD D G+ N
Sbjct: 382 QGQGAHHNFQGSLFSGHGGRGAQAGGSGHFDRAGGRDNDKAAGGASALDDTDVAGVNFNN 441
Query: 428 QSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
SR LM+KL RT PAV + ++ + P V +PV
Sbjct: 442 YSRDALMRKLARTD-----------EPAVEPTPDEKRKVPKPQVNAKPLPVSV------- 483
Query: 488 NMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAG 546
NMA S C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G
Sbjct: 484 NMA-------SRCVLLRNMFDPAEEEGESWIKELEDDVRAECEDKYGHVVHIALDPNTQG 536
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISA 577
+YL+F+ + +A + ++ R+F R ISA
Sbjct: 537 DIYLKFDRVQGGENAIKGLNGRFFGGRQISA 567
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/423 (33%), Positives = 208/423 (49%), Gaps = 78/423 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P + ERD+RTVF Q+ + +++ EFF K G V + +++ DR S RSKGVGY+EF +
Sbjct: 170 PLTEDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKN 229
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
SV A+ L+GQ LLG PV+V+ +EAEKN N A T P +LYVGN+HF
Sbjct: 230 EDSVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDA--TGNHPNSIPFHRLYVGNIHF 287
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
++TE L+ +FEPFG +E VQL D +TG+ +G+GFVQF A+ A +NG ++ G
Sbjct: 288 SITEQDLQNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDATQAREALEKMNG-FDLAG 345
Query: 392 RTLKV----------------------------------------SSVTDHVGTQDT--A 409
R ++V +S D G +D
Sbjct: 346 RPIRVGLGNDKFTPESTANLLQRFQGQNQQFQGSSFSGAGGRGPPTSNFDRAGARDNEKG 405
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
++ DD D G+ N SR LM+KL RT + IS P
Sbjct: 406 TGASALDDTDVAGVNFNNYSRDALMRKLART----------------------DEPISAP 443
Query: 470 VVGQPAVPVPAV--TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEI-QGDVE 526
Q A P + P+ NMA S C++L+NMFDPA + D+ E+ + +
Sbjct: 444 SDRQVAKPKTEIKPNLPINVNMA-------SRCVVLRNMFDPAEQEGEDWAKELEEEVRQ 496
Query: 527 EECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
E KYG V HI +D S G +YL+F+ + +A + ++ R+F R+I+A + Y
Sbjct: 497 EAEEKYGHVVHISLDPNSPGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPVVDAVYS 556
Query: 587 AKF 589
+ F
Sbjct: 557 SLF 559
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 197/393 (50%), Gaps = 80/393 (20%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 192
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI 320
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+ E
Sbjct: 193 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQIES-------------------- 232
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
+QL +D ETG+ KG+GF+ F+ E AK A
Sbjct: 233 ------------------------------IQLMMDSETGRSKGYGFITFSDSECAKKAL 262
Query: 381 SALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL- 437
LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +L
Sbjct: 263 EQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLA 318
Query: 438 DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSP 497
+ TG L + PA + +++ V A+ A P+
Sbjct: 319 EGTG--------LQIPPAAQQALQMSGSLAFGAVAASALAAAASVQPL-----------A 359
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
++C L NMF+P E + +D EI+ DV EEC+K+G V HIYVDK SA G VY++ S
Sbjct: 360 TQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIA 419
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 420 AAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 452
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 212/397 (53%), Gaps = 70/397 (17%)
Query: 230 LKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLG 288
LKA ERD+YEFFS+ AGKVRD++ I D+ S +SKGV Y+EFY +V A++ +G +L
Sbjct: 509 LKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVKALSANGYMLKN 568
Query: 289 QPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL---HFNMTETQLRKLFEPF 345
+P+ ++ S+AEKN ++ +A P I KLY+G L N++E +L++LF PF
Sbjct: 569 RPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLYIGGLVGPLGNISEQELKQLFNPF 625
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH--- 402
G + V++ D TG+CKGFGF+QF + A A LNG +EI GR LKVS D
Sbjct: 626 GEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNG-MEIAGRELKVSFAQDSKYI 684
Query: 403 VGTQDTA---------AKSADFDD--------------DDGGGLALNAQSRALLMQKLDR 439
+ ++ A AK A ++ DDGGGL A S+ LMQKL R
Sbjct: 685 LASEKEAKDKLIAQLLAKKAKAEEKVEEPDNEKIDNDDDDGGGLIAGAGSKIALMQKLQR 744
Query: 440 -----TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 494
+GI++ A + N + P+ A P + PN
Sbjct: 745 DPILDSGISSQFA-----------TGANTIMQTAPL----ATAQPNTLNNITPN------ 783
Query: 495 GSPSECLLLKNMFDP---AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYL 550
L+L NMF P ++ +DPDF +I DV+EECSKYG V I++D ++ G +Y+
Sbjct: 784 ------LVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSVTKIWLDTKNIDGKIYI 837
Query: 551 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 587
++ + + + A + ++ R+F LI+A F+ E +++
Sbjct: 838 KYANNDESLKAFQFLNGRYFGGSLINAYFLTTEMWDS 874
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 163/263 (61%), Gaps = 26/263 (9%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRR
Sbjct: 13 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRR 72
Query: 261 SKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYG 318
SKG+ Y+EF DV SVP+AI L+GQ +LG P++V+ S+AEKN +N G+A GP
Sbjct: 73 SKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSA-GPM- 130
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+LYVG+LHFN+TE LR +FEPFG +E +QL +D ETG+ KG+GF+ F+ E AK
Sbjct: 131 ----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKK 186
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQK 436
A LNG E+ GR +KV VT+ D ++ S+ D D+ G+ L R LM +
Sbjct: 187 ALEQLNG-FELAGRPMKVGHVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMAR 242
Query: 437 L-DRTGI--------ATSIAGSL 450
L + TG+ A ++GSL
Sbjct: 243 LAEGTGLQIPPAAQQALQMSGSL 265
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 203/397 (51%), Gaps = 56/397 (14%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF SV
Sbjct: 172 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEESVA 231
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++T
Sbjct: 232 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGHNHAAPF----HRLYVGNIHFSIT 287
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR +
Sbjct: 288 ENDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRAI 345
Query: 395 KVSSVTDHVGTQDTAAK-------------SADFDDDDGGGLALNAQSRALLMQKLDRTG 441
+V D T D++A+ + F G G+ S DR G
Sbjct: 346 RVGLGNDKF-TPDSSAQRSQGHGANQQNFQGSSFSGQGGRGIQAGGTS------SFDRAG 398
Query: 442 IATSIAGSLGVA------PAVNGSAVNQQAI--SLPVVGQPAVPVP------------AV 481
S G+ A VN + ++ A+ L +PA P
Sbjct: 399 GRDSEKGAGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPAADDKQKLLRPKTEVK 458
Query: 482 TAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYV 540
PV NMA S C+LL+NMFDP+ E + +++ DV EC KYG V HI +
Sbjct: 459 PLPVNVNMA-------SRCVLLRNMFDPSEEEGEAWIKDLEDDVRAECEEKYGHVVHIAL 511
Query: 541 DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 512 DPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 548
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 214/444 (48%), Gaps = 104/444 (23%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P D ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 175 PTGD-ERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKG 233
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
SV A+ L+GQ LLG PV+V+P+EAEKN V+++ S+G + P+ +LYVGN+H
Sbjct: 234 EESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVPF----HRLYVGNIH 289
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
F++TET L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++
Sbjct: 290 FSITETDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDAGQAREALEKMNG-FDLA 347
Query: 391 GRTLKVSSVTDHVGTQDTA----------------------------------------- 409
GR ++V D + TA
Sbjct: 348 GRPIRVGLGNDKFTPESTANLLRGFQGQNQNQQFQGSSFSGAGGRGPQASNFDRAGGRDN 407
Query: 410 ---AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAI 466
++ DD D G+ N SR LM+KL RT
Sbjct: 408 EKGTGASALDDTDVAGVNFNNYSRDALMRKLART-------------------------- 441
Query: 467 SLPVVGQP--AVPVPAV-TAPVIPNMAAEFIGSPSECLLLKNMFDPA---METDP----- 515
P GQP + P T P+ N++ S C++L+NMFDPA + P
Sbjct: 442 DEPTNGQPERQILKPKTETKPLPVNVSMA-----SRCVVLRNMFDPAEYVFYSPPSEAGS 496
Query: 516 ---------DFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 565
D+ E++ +V +E KYG V HI +D S G +YL+F+ +A + +
Sbjct: 497 LTSARQVGDDWAKELEDEVRQEAEEKYGHVVHISLDPNSQGDIYLKFDKVSGGENAIKGL 556
Query: 566 HMRWFARRLISAIFMKPEDYEAKF 589
+ R+F R+I+A + Y + F
Sbjct: 557 NGRYFDGRMITAAPVVDAVYSSLF 580
>gi|388517761|gb|AFK46942.1| unknown [Lotus japonicus]
Length = 175
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 122/167 (73%), Gaps = 14/167 (8%)
Query: 423 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 482
L+LNA SRA LMQKLDR+G S+ G LG SAVN +++LPV G + +P T
Sbjct: 19 LSLNASSRASLMQKLDRSGTTPSMVGFLG------DSAVNNTSLNLPVGG---LQIPTAT 69
Query: 483 APVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDK 542
P + + IG PSECL+LKNMFDP ET+PDFDL+I+ DVE ECSK+G++KHIYVDK
Sbjct: 70 IPSV-----DTIGVPSECLMLKNMFDPKAETEPDFDLDIKEDVEAECSKFGKLKHIYVDK 124
Query: 543 RSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+SAGFVYLRFE+T+AA AQRA+H RWFA ++I+ FM P+ YE +F
Sbjct: 125 KSAGFVYLRFEATQAAIGAQRALHGRWFAGKMITVSFMVPQSYEDRF 171
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 231/485 (47%), Gaps = 73/485 (15%)
Query: 34 EEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDR 93
E E +Y+K ED ++ +E +K + +N + H RDRDR
Sbjct: 11 EAMLEAAYKKEEDEQQRKEVKKDSPSNTANNTSSTDNNGSGTSASSSSGETSNHSRDRDR 70
Query: 94 DRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSS 153
R R RSRER+ + + R +R E R +R E R RS ++
Sbjct: 71 HRQR---------NSLSRSRERQHRHRSRSWDHQRSSES-RSWDRRREDRVRYRSPPLAT 120
Query: 154 QSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPE 213
R S+S RE+ RE + + PE
Sbjct: 121 GRRYGHSKSPHFREKSPVRE--------------------------------PVDNLSPE 148
Query: 214 ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++
Sbjct: 149 ---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQ 205
Query: 274 SVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
SVP+AI L+GQ LLG P++V+ S+AEKN +N G+ GP +LYVG+LHF
Sbjct: 206 SVPLAIGLTGQWLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHF 259
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
N+TE LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ G
Sbjct: 260 NITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAG 318
Query: 392 RTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
R ++V T+ G D D + D G +A R LM KL G + +
Sbjct: 319 RPMRVGHATERPDGGTDITFPDGDRELDLG-----SAGGRLQLMAKLAE-GSGIQLPTTA 372
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLK 504
A A +A A+ L AVP+ PA + P N+A++ + S+CL L
Sbjct: 373 AAAAAAAAAAAAAAALQL----NGAVPLGALNPAALTALSPALNLASQAVA--SQCLQLS 426
Query: 505 NMFDP 509
++F P
Sbjct: 427 SLFTP 431
>gi|328848768|gb|EGF97966.1| hypothetical protein MELLADRAFT_84111 [Melampsora larici-populina
98AG31]
Length = 695
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 230/486 (47%), Gaps = 119/486 (24%)
Query: 183 ERER-------ELRERERDLEMR----------------------ESRRYKEKKEVVEPE 213
ERER ++R RD R ++ RY+ ++ P
Sbjct: 230 ERERYRKRHRSRSKDRSRDRSHRPDDPIDDREIERRRRYEEAEGEDNPRYRPYEQTASPT 289
Query: 214 A---------DPERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKG 263
A + E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKG
Sbjct: 290 ARRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKG 349
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK------NLVQSNTSAGGTATGPY 317
VGY+EF ++ SV A+AL+G LLG PVMV+ +EAEK N +N +AG P
Sbjct: 350 VGYVEFRELDSVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVPPA 409
Query: 318 GAIDR-------------------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
+ R +LYVG+L+FN+T+ LR++F+PFG +E V L D
Sbjct: 410 PPVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQI 469
Query: 359 TGQCKGFGF-------VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAK 411
TG+ KG+ F ++F + AK A +NG ++ GR L+V + Q AA
Sbjct: 470 TGKSKGYAFTLLTCVNIRFKNMHDAKNAMEKMNG-FQLAGRALRVE-----IKAQPPAA- 522
Query: 412 SADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN---------GSAVN 462
LNA + ++ I T G+ + + + GS +N
Sbjct: 523 ------------LLNATAPGVI-----NPVIVTPTGGNFAMTNSNSFEERLEEPVGSGMN 565
Query: 463 QQA-----ISLPVVGQPA-VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD 516
Q + L QP VPV + P IP S +LLKNMF+P ET+
Sbjct: 566 QISRVELMHKLARTEQPTNVPVTDMFRPNIPTAT-------SRSVLLKNMFNPEEETERG 618
Query: 517 FDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGF-VYLRFESTEAAASAQRAMHMRWFARRL 574
+D+E++ DV+ EC KYG V I ++K S G +Y+ F+S +A A ++ RWF R
Sbjct: 619 WDMELRDDVKGECEEKYGPVLAIAIEKESMGGEIYITFDSVASAQKAIAGLNNRWFGGRQ 678
Query: 575 ISAIFM 580
I+A F+
Sbjct: 679 ITAAFI 684
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/467 (32%), Positives = 222/467 (47%), Gaps = 88/467 (18%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESR-RYKEKKEVVEPEADPER 218
+RSR + R ER+ +R R SR R E E ER
Sbjct: 123 TRSRSPNDDRYYRPSGRARREERDDDRRSRRERETRRRSPSRERTPELNE-------DER 175
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
D+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SV A
Sbjct: 176 DRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEDSVAPA 235
Query: 279 IALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
I L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++TE
Sbjct: 236 IQLTGQKLLGIPIIAQLTEAEKNRQARNPDASSGNNHAAPF----HRLYVGNIHFSITEN 291
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR ++V
Sbjct: 292 DLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRAIRV 349
Query: 397 ----------------------------SSVTDHVGTQDTAAKSADF------------- 415
SS + H G A +++F
Sbjct: 350 GLGNDKFTPDSSAQRLQSQGANQQNFQGSSFSGHGGRGIQAGGTSNFDRAGGRDSEKGAG 409
Query: 416 ----DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 471
DD D G+ N SR LM+KL RT + SA ++Q + P
Sbjct: 410 ASALDDTDVAGVNFNNYSRDALMRKLARTDEPSE------------SSADDKQKVLRPKT 457
Query: 472 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-S 530
+PV NMA S C++L+NMFDP E + E++ DV EC
Sbjct: 458 ETKPLPVNV-------NMA-------SRCVMLRNMFDPGEEEGESWIKELEDDVRAECEE 503
Query: 531 KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F + I+A
Sbjct: 504 KYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGKQITA 550
>gi|348674007|gb|EGZ13826.1| hypothetical protein PHYSODRAFT_249442 [Phytophthora sojae]
Length = 413
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 206/406 (50%), Gaps = 47/406 (11%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
RD RTVF Q+ K E+D+ F SK GKV +V LI D+ + RSKG Y+E ++ VP
Sbjct: 5 RDHRTVFVGQLTQKVREKDLERFLSKTGKVENVLLIRDKFTNRSKGFAYVELSNLEDVPK 64
Query: 278 AIALSGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTA--TGPYGA-----------IDR 322
+ L+GQ+ Q P+M+K SEAEKN S A T P A
Sbjct: 65 VLLLNGQVPDFQVFPIMIKASEAEKNFAAKKDSVMNAAASTAPLTADAPGMSASALSAAS 124
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
++Y GNLH N+TE LR +F+ FG V V + D E G+ KGF F+QF+ + A A S
Sbjct: 125 RIYCGNLHTNITEDDLRIVFQSFGEVLSVTINRD-EMGRSKGFSFIQFSSPQEANFALSK 183
Query: 383 LNGKLEIVGRTLKVSSVTDHV---------------GTQDTAAKSADFDDDDGGGLALNA 427
NG LE+ G L++ V ++ + +DD+G GL++NA
Sbjct: 184 GNG-LELAGNYLRLGPVNENAMNGGNRGMAGAGGSGADNGASGGRWKLEDDEGTGLSMNA 242
Query: 428 QSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
QSR+ LM KL G ++ + A A N A + + A + + T
Sbjct: 243 QSRSALMAKL--AGNDVNLFPTRYPAAASTTDYTNTMAATAAQRAEQAAALMSST----- 295
Query: 488 NMAAEFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGDVEEECSKYGRVKHIYV-DKR 543
E GS S C ++KNMFD E +P++ +EIQ DVEEEC +YG V H YV +++
Sbjct: 296 ----EIEGSESFCFVVKNMFDVYQEQKSGNPEWAVEIQQDVEEECGQYGPVLHTYVENEK 351
Query: 544 SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
G VY+ F + AA SA + +H RWF +R IS ++ ++Y F
Sbjct: 352 QGGLVYVLFANVSAAVSAAKKLHGRWFNKRQISVRYLSSQEYVGMF 397
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/437 (34%), Positives = 223/437 (51%), Gaps = 69/437 (15%)
Query: 196 EMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
E R SRR E PE + +RD+RT+F Q+ +A R + FF + G V + +++
Sbjct: 155 ERRNSRRNNTPPE---PEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVK 211
Query: 255 DRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 314
DR + RSKGVGY+EF D SVP A+ L+GQ L G P++ + +EAEKN + S GGTA
Sbjct: 212 DRVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRA-ARPSEGGTAP 270
Query: 315 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQL 373
G GA +LYVGN+HF++TE L+++FEPFG +E V L D + G+ KG+GFVQF
Sbjct: 271 GANGAPFHRLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDP 330
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA---------AKSAD---------- 414
HAK A + +NG E+ GR ++V D + TA A+S
Sbjct: 331 SHAKNALAEMNG-FELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGR 389
Query: 415 ----------FD-----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAV 456
FD DD G G AL+ A + + DR+ + ++A P
Sbjct: 390 GAYAGGSGGVFDRTHSKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARRDNPEPTK 449
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---T 513
G+ PVV +P VPV V P+ S+C+ ++N FDP E
Sbjct: 450 QGAQ--------PVVSKPRVPV--VDKPMA-----------SKCIKIENAFDPDEEQRNW 488
Query: 514 DPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 572
++ +++ +V+ EC KYG+V HI VD S G ++++F+S A + ++ R F
Sbjct: 489 GDNWVKDLELEVKSECDKKYGKVVHIAVDTNSEGEIFVKFDSVSGGEKALQGLNGRNFNH 548
Query: 573 RLISAIFMKPEDYEAKF 589
R I A ++ + Y + +
Sbjct: 549 RTIRASYVVDKIYNSLW 565
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/396 (38%), Positives = 210/396 (53%), Gaps = 50/396 (12%)
Query: 134 RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERER 193
R+R+R +R S SRSR R R R R + +R E R +R RE R R R
Sbjct: 82 RDRDRHRQRNSLSRSRE----------RQHRHRSRSWDHQRSSE-SRSWDRRREDRVRYR 130
Query: 194 DLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFS 242
+ RRY +EK V EP PE RD RTVF Q+ + RD+ +FFS
Sbjct: 131 SPPLATGRRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFS 190
Query: 243 KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN- 301
GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN
Sbjct: 191 AVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQASQAEKNR 250
Query: 302 -LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETG 360
+N G+ GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG
Sbjct: 251 LAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTG 304
Query: 361 QCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDD 419
KG+GF+ F+ E A+ A LNG E+ GR ++V T+ G D D + D
Sbjct: 305 HSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHATERPDGGTDITFPDGDRELDL 363
Query: 420 GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV- 478
G +A R LM KL G + + A A +A A+ L AVP+
Sbjct: 364 G-----SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAAAAAAAAALQL----NGAVPLG 413
Query: 479 ---PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 509
PA + P N+A++ + S+CL L ++F P
Sbjct: 414 ALNPAALTALSPALNLASQAVA--SQCLQLSSLFTP 447
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 230/469 (49%), Gaps = 86/469 (18%)
Query: 157 RSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADP 216
R+ +RSR + +R R+ E R RD + S R +E+ EP D
Sbjct: 123 RARTRSRSPYD---DRYYRPSGRSRRDERDEDRRTRRDRKRSPSPRSRERTP--EPTED- 176
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF +V
Sbjct: 177 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDAVA 236
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N S+G P+ +LYVGN+HF++T
Sbjct: 237 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGNNHAAPF----HRLYVGNIHFSIT 292
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E+ L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR +
Sbjct: 293 ESDLQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-FDLAGRAI 350
Query: 395 KV-------------------------------------------SSVTDHVGTQDT--A 409
+V +S D G +D+
Sbjct: 351 RVGLGNDKFTPDSNAQRMQSQGANQHNFQGSLFSGHGGRGVQAGGTSNFDRAGGRDSEKG 410
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
A ++ DD D G+ N SR LM+KL RT A A +QQ + P
Sbjct: 411 AGASALDDTDVAGVNFNNYSRDALMRKLARTDEPAEPA------------ADDQQKVLRP 458
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
A P+ PV NMA S C++L+NMFDP E + E++ DV EC
Sbjct: 459 KT--EAKPL-----PVNVNMA-------SRCVMLRNMFDPNEEEGEAWIKELEDDVRAEC 504
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 505 EDKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 553
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 191/354 (53%), Gaps = 28/354 (7%)
Query: 134 RERERDGERRSSSRS----RRSSSQS--RRSSSRSRRERERESERERELELERERERERE 187
R+R+R ERRS SRS +R SQS R SS SR + R RE + R
Sbjct: 79 RDRDRHCERRSGSRSGDRQQRPCSQSWDRPHSSESRSQDWR---REDYVPYRRLPLATGW 135
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
+ RE +E + + PE ERD RTVF Q+ + RD+ +FFS GKV
Sbjct: 136 RYGPSKSPHFRERSPVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAIGKV 192
Query: 248 RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQS 305
DVR+I DRNSRRSKG+ Y+EF D+ SVP+AI L+GQ LLG P++V+ S+AEKN +
Sbjct: 193 HDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPIVVQASQAEKNRLAAMA 252
Query: 306 NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGF 365
N G+ GP ++LYVG LHFN+TE LR +FEPFG +E + L D ETG KG+
Sbjct: 253 NNLQKGSG-GP-----KRLYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGY 306
Query: 366 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDD---DGG 421
GF+ F++ E A+ A LNG E+ GR ++V +T+ G D D D GG
Sbjct: 307 GFITFSESECARRAVEQLNG-FELAGRPMRVGHLTERADGGTDITFPDGDQVVDLGSAGG 365
Query: 422 GLALNAQSRALLMQKLDRTGIATSIAGSLGVAP--AVNGSAVNQQAISLPVVGQ 473
L L A+ + + + + GV P A+N +A+ + +L + Q
Sbjct: 366 HLQLMAKGSGIHL-PITAAAAQAAALQLNGVVPLSALNPAALTALSPALKLTSQ 418
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 213/424 (50%), Gaps = 84/424 (19%)
Query: 204 KEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSK 262
K + + EP+ + ERD+RTVF Q+ + +++ FF KAG V+D +++ DR S RSK
Sbjct: 186 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 245
Query: 263 GVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKP-----SEAEKNLVQSNTSAGGTATGPY 317
GVGY+EF + SVP+AI L+GQ L + P +EAEKN NT G +G
Sbjct: 246 GVGYVEFKNEESVPLAIQLTGQKL-----LGIPIIAQFTEAEKNKAARNTE--GHVSGNQ 298
Query: 318 GAID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+I +LYVGN+HF++TE+ L+ +FEPFG ++ VQL D E G+ +G+GFVQF A
Sbjct: 299 NSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKD-ENGRSRGYGFVQFRDPNQA 357
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHV--------------GTQDT----------AAKS 412
+ A +NG ++ GR ++V D G Q++ A
Sbjct: 358 REALEKMNG-FDLAGRPIRVGLGNDKFSSDPATNLMRLQAQGQQNSLYGQGGRGAATALG 416
Query: 413 ADF------------------DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAP 454
+F DD D G+ N SR LM+KL RT P
Sbjct: 417 GNFDRAGGRDNDKGVGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EP 465
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
A + +A +++ P A P+ PV NMA S C+LL+NMFDP E
Sbjct: 466 AADTTADDKR--KAPKARPEAKPL-----PVSVNMA-------SRCVLLRNMFDPTEEEG 511
Query: 515 PDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARR 573
+ E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R
Sbjct: 512 DSWVKELEDDVRAECEEKYGHVVHIALDPNAQGDIYLKFDRVQGGENAIKGLNGRFFGGR 571
Query: 574 LISA 577
I+A
Sbjct: 572 QITA 575
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 149/415 (35%), Positives = 216/415 (52%), Gaps = 44/415 (10%)
Query: 119 EKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELEL 178
+KE + ++R++ +K+ S+ + +S S S S R+R+ R+R L
Sbjct: 19 KKEEDEQQRKEVKKDSPSNTANNTSSTDNNGSGTSASSSSGETSNHSRDRDRHRQRN-SL 77
Query: 179 ERERERERELRERERDLE-MRESRRYKEKKEVVEPEADP--------------ERDQRTV 223
R RER+ R R D + ESR + ++E P ERD RTV
Sbjct: 78 SRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPLATGEPVDNLSPEERDARTV 137
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSG 283
F Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+G
Sbjct: 138 FCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 197
Query: 284 QLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 341
Q LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+TE LR +
Sbjct: 198 QWLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNITEDMLRGI 251
Query: 342 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 401
FEPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR ++V T+
Sbjct: 252 FEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHATE 310
Query: 402 HV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSA 460
G D D + D G +A R LM KL G + + A A +A
Sbjct: 311 RPDGGTDITFPDGDRELDLG-----SAGGRLQLMAKLAE-GSGIQLPTTAAAAAAAAAAA 364
Query: 461 VNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 509
A+ L AVP+ PA + P N+A++ + S+CL L ++F P
Sbjct: 365 AAAAALQL----NGAVPLGALNPAALTALSPALNLASQAVA--SQCLQLSSLFTP 413
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 198/408 (48%), Gaps = 76/408 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P + ERD+RTVF Q+ + R++ EFF K G V + +++ DR S RSKGVGY+EF
Sbjct: 176 PLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKS 235
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
V A+ L+GQ LLG PV+V+ +EAEKN T + T P +LYVGN+HF
Sbjct: 236 EEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTES--TGHHPNSIPFHRLYVGNIHF 293
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF--------------------- 370
++TE L+ +FEPFG +E VQL D + G+ +G+GFVQ
Sbjct: 294 SITEQDLQNVFEPFGELEFVQLQKD-DNGRSRGYGFVQPERPSKKMNGFDLAGRPIRVGL 352
Query: 371 ------------------AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDT--AA 410
Q H + SA +G G +S D G +D
Sbjct: 353 GNDKFTPESTANLLQRFQGQNHHQQFQGSAFSG----AGGRGPATSNFDRAGARDNEKGT 408
Query: 411 KSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 470
++ DD D G+ N SR LM+KL RT PA S V + I P
Sbjct: 409 GASALDDTDVAGVNFNNYSRDALMRKLART----------DEPPA---SVVPDRQILKPK 455
Query: 471 VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC- 529
+PV NMA S C++L NMFDPA E D+ E++ DV EE
Sbjct: 456 TETKPLPVNV-------NMA-------SRCVVLHNMFDPAEEEGEDWIKELEDDVREEAE 501
Query: 530 SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
+KYG V HI +D SAG +YL+F+ + +A + ++ R+F R+I+A
Sbjct: 502 AKYGHVVHISLDPNSAGDIYLKFDKVQGGENAIKGLNGRYFGGRMITA 549
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 181/323 (56%), Gaps = 37/323 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 143 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 202
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N GT
Sbjct: 203 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTG 262
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 263 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 316
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR +++ VT+ + G+ D D + D G +A R
Sbjct: 317 ECARRALEQLNG-FELAGRPMRIGHVTERLDGSTDITFPDGDQELDLG-----SAGGRLQ 370
Query: 433 LMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP- 487
LM KL A G+ +L + G AVP+ PA + P
Sbjct: 371 LMAKL---------AEGSGIQLPTTXXXXXXXXXALQLNG--AVPLGALNPAALTALSPA 419
Query: 488 -NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 420 LNLASQAIA--SQCFQLSSLFTP 440
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/433 (32%), Positives = 212/433 (48%), Gaps = 97/433 (22%)
Query: 212 PEADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY 270
PE D E RD+RTVF Q+ + + FF ++G V + +++ DR S RSKGVGY+EF
Sbjct: 202 PELDQEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFA 261
Query: 271 DVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
D SV A+ L+GQ L+ P++V+ +EAEKN Q+ TS G T G +LYVGN+H
Sbjct: 262 DEESVQKALELTGQKLMNIPIIVQLTEAEKNR-QARTSE-GQPTQSNGIPFHRLYVGNIH 319
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
F++ E+ LR +FEPFG +E VQL + +TG+ KG+GFVQFA+ + AK A +NG E+
Sbjct: 320 FSIEESDLRDVFEPFGELEFVQLQKE-DTGRSKGYGFVQFAKSDEAKIALEKMNG-FEVA 377
Query: 391 GRTLKV------------SSVTDHVGTQ-------------------------------- 406
GR ++V S++ G+Q
Sbjct: 378 GRPIRVGLGSDKFTPETTSALLQRFGSQAHHAQMQGSSFSGAGGRGAHAGGQNNFDRSTN 437
Query: 407 ----DTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 462
D + S DD D GG+A N SR LM KL RT +
Sbjct: 438 AREHDKSGASGALDDTDVGGVAFNNYSRHALMSKLARTDEPQPVV--------------- 482
Query: 463 QQAISLP---VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDF-D 518
+ ++LP VV +P +PS C+L+KN+++ + ET+ D
Sbjct: 483 ETKVALPQRVVVDEP---------------------NPSRCVLIKNVYNHSKETEESLAD 521
Query: 519 LEIQGDVEEECS-KYGRVKHI-YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
L++ D+ EEC KYG V H+ + G VY++F + + A + ++ R+F R ++
Sbjct: 522 LKV--DMREECDKKYGSVVHLDTASGSTGGEVYVKFAAKDGGIKAVQGLNGRFFGGRRLT 579
Query: 577 AIFMKPEDYEAKF 589
A ++ Y +
Sbjct: 580 ASYVADAFYHTMW 592
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 192/364 (52%), Gaps = 38/364 (10%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 96 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 154
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 155 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 214
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 215 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 268
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 269 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 327
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATS 445
E+ GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 328 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL- 381
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ +A A + + AVP+ A+ + ++ + S+C L +
Sbjct: 382 --------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSS 432
Query: 506 MFDP 509
+F P
Sbjct: 433 LFTP 436
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 208/400 (52%), Gaps = 48/400 (12%)
Query: 202 RYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
R KE+KE+ E +DQRTVF Q+ +KA ER V FF GKVR V ++ DR++ +
Sbjct: 68 RTKEQKELDELT----KDQRTVFISQLVMKADERAVRAFFENFGKVRSVVMLRDRSTGKH 123
Query: 262 KGVGYIEFYDVMSVPMAIALSGQLLLGQ--PVMVKPSEAEKN-LVQSNTSAGGTATGPYG 318
KG Y+E D+ ++P + ++ Q+ Q P+ VK SEAEKN L + A GT P G
Sbjct: 124 KGFAYVEMADLETIPNVLLMNDQVPDFQKFPIAVKASEAEKNYLAKQEAIAKGTVR-PDG 182
Query: 319 AIDR------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
R K+++GNLH N+TE L L +PFG V+ + L + E G KGF F F++
Sbjct: 183 GRKRNVGQPNKVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKN-EEGVSKGFAFATFSK 241
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA---------DFDDDDGGGL 423
+E A+ + L G + + R +KV V D G + A S+ ++ DD G L
Sbjct: 242 VEEAQTVMTQLGG-VPLADRPIKVGPVNDR-GVEAVAMASSVPASGPATGNWRLDDAGVL 299
Query: 424 ALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA 483
++A +RA LM KL G A I + P G+ Q P P
Sbjct: 300 PMDAAARAELMSKL---GAAAGIQVPVSAGP---GAQQLQLQQLQQQQLLQQQPPP---- 349
Query: 484 PVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVD-K 542
+G PS LLLKNMFDPA E D ++L+IQ DVE+E K+G V+H+ VD K
Sbjct: 350 ---------IVGIPSRALLLKNMFDPAEEKDDGWELDIQDDVEDEGRKFGEVRHVRVDVK 400
Query: 543 RSAGFVYLRFEST--EAAASAQRAMHMRWFARRLISAIFM 580
G VY+ F+ E A + +A++ RWFA R+I ++
Sbjct: 401 GPGGHVYMLFKEGEEEGAQKSAQALNGRWFAGRMIMVEYL 440
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 196/400 (49%), Gaps = 82/400 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKV+DVRLI +RR KG+ Y+EF D SV
Sbjct: 166 ERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDVRLITCNKTRRFKGIAYVEFKDPESVT 225
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---------LVQSNTSAGGTATG------------ 315
+A+ LSGQ LLG P++V+ ++AEKN + + T G
Sbjct: 226 LALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQTGPMRLYVGSLHFNITEDMLR 285
Query: 316 ----PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
P+G ID +QL +D ETG+ KG+GF+ F
Sbjct: 286 GIFEPFGKIDN----------------------------IQLIMDPETGRSKGYGFLTFR 317
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRA 431
+ AK A LNG E+ GR +KV +VT+ D D+ D G+ L A R
Sbjct: 318 NADDAKKALEQLNG-FELAGRPMKVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRL 375
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
LM KL + TG+ P +A+N P +T P P A
Sbjct: 376 QLMFKLAEGTGLEI---------PPAAANALNM--------------APVMTQPQPPPQA 412
Query: 491 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVY 549
A I ++C +L NMFDP ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY
Sbjct: 413 APPIA--TQCFMLSNMFDPQNETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVY 470
Query: 550 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
++ S A +A ++H RWFA R+I+A ++ +Y + F
Sbjct: 471 VKCPSIATAVAAVNSLHGRWFAGRVITAAYVPVVNYHSLF 510
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 192/379 (50%), Gaps = 72/379 (18%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
+D R + +RR KG+ Y+EF D SV +
Sbjct: 176 QDVRLITC------------------------------NKTRRFKGIAYVEFKDPESVTL 205
Query: 278 AIALSGQLLLGQPVMVKPSEAEKNLV---QSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
A+ LSGQ LLG P++V+ ++AEKN + N G TGP +LYVG+LHFN+T
Sbjct: 206 ALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ-TGPM-----RLYVGSLHFNIT 259
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG E+ GR +
Sbjct: 260 EDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPM 318
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLG 451
KV +VT+ D D+ D G+ L A R LM KL + TG I + A +L
Sbjct: 319 KVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALN 377
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
+AP ++ QA ++C +L NMFDP
Sbjct: 378 MAPVMSTPQPPPQAAPP---------------------------IATQCFMLSNMFDPQN 410
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWF 570
ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A ++H RWF
Sbjct: 411 ETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWF 470
Query: 571 ARRLISAIFMKPEDYEAKF 589
A R+I+A ++ +Y + F
Sbjct: 471 AGRVITAAYVPVVNYHSLF 489
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 192/379 (50%), Gaps = 72/379 (18%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
+D R + +RR KG+ Y+EF D SV +
Sbjct: 176 QDVRLITC------------------------------NKTRRFKGIAYVEFKDPESVTL 205
Query: 278 AIALSGQLLLGQPVMVKPSEAEKNLV---QSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
A+ LSGQ LLG P++V+ ++AEKN + N G TGP +LYVG+LHFN+T
Sbjct: 206 ALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNLMPKGQ-TGPM-----RLYVGSLHFNIT 259
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ +QL +D ETG+ KG+GF+ F + AK A LNG E+ GR +
Sbjct: 260 EDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNG-FELAGRPM 318
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG--IATSIAGSLG 451
KV +VT+ D D+ D G+ L A R LM KL + TG I + A +L
Sbjct: 319 KVGNVTERTDLIQ-GPSLLDTDELDRSGIDLGATGRLQLMFKLAEGTGLEIPPAAANALN 377
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAM 511
+AP ++ QA ++C +L NMFDP
Sbjct: 378 MAPVMSTPQPPPQAAPP---------------------------IATQCFMLSNMFDPQN 410
Query: 512 ETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWF 570
ET+P++ EI+ DV EEC+K+G V H+YVD+ S G VY++ S A +A ++H RWF
Sbjct: 411 ETNPNWAKEIRDDVIEECNKHGGVLHVYVDQASPQGNVYVKCPSIATAVAAVNSLHGRWF 470
Query: 571 ARRLISAIFMKPEDYEAKF 589
A R+I+A ++ +Y + F
Sbjct: 471 AGRVITAAYVPVVNYHSLF 489
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 208/428 (48%), Gaps = 100/428 (23%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
K+E + ERD+RTVF Q+ + RD+ FF K G V + +++ DR S+RSKGVG
Sbjct: 170 KREATPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVG 229
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVK-----------PSEAEKNLVQSNTSAGGTAT 314
Y+EF + SV A+ L+GQ LLG P++V+ SE TAT
Sbjct: 230 YVEFKNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSE--------------TAT 275
Query: 315 G--PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
G P +LYVGN+HFN+TE L+ +FEPFG +E VQL D + G+ +G+GFVQ+ +
Sbjct: 276 GAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DNGRSRGYGFVQYRE 334
Query: 373 LEHAKAAQSALNGKLEIVGRTLKV------------------------------------ 396
A+ A +NG ++ GR ++V
Sbjct: 335 ASQAREALEKMNG-FDLAGRPIRVGLGNDKFTPESTANMLQRFPGQNQAYQGSAFSGAGG 393
Query: 397 ----SSVTDHVGTQDT--AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSL 450
+S D G +D+ + ++ DD D G+ N SR LM+KL RT A+
Sbjct: 394 RGPQTSAFDRAGGRDSEKSGGASALDDTDVAGVNFNNYSRDALMRKLARTDEAS------ 447
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPA 510
NG+ Q V +P + + PV +MA S C++L NMFDP
Sbjct: 448 ------NGADERQ-------VLKPKTEIKPL--PVNVSMA-------SRCVVLHNMFDPE 485
Query: 511 METDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
E D+ E++ DV +E KYGRV HI VD S G +YL+F+ + +A R ++ R+
Sbjct: 486 EEDGDDWAKELEDDVRQEAEKKYGRVVHIAVDPNSKGDIYLKFDKVQGGENAIRGLNGRY 545
Query: 570 FARRLISA 577
F R+I A
Sbjct: 546 FGGRMIDA 553
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 192/364 (52%), Gaps = 38/364 (10%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 140 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 198
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 199 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 258
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 259 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 312
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 313 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 371
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATS 445
E+ GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 372 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL- 425
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ +A A + + AVP+ A+ + ++ + S+C L +
Sbjct: 426 --------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSS 476
Query: 506 MFDP 509
+F P
Sbjct: 477 LFTP 480
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 208/410 (50%), Gaps = 51/410 (12%)
Query: 193 RDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL 252
RD+ R K +E A+ ERDQRT+ Q+ RD+ EFFS G VRDVR+
Sbjct: 140 RDVMPFNPRHSPPKNAKLELSAE-ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRI 198
Query: 253 IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGT 312
I D + RSKG+ Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N + +N+S T
Sbjct: 199 ITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRI-ANSSVAST 257
Query: 313 A--TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE---TGQCKGFGF 367
P G ++ V NLH + + L ++F+ FG ++ LD+E G+ KGF
Sbjct: 258 LGFVAPGGKGPAQVLVENLHPKIDDKMLGEVFDSFGRID----KLDVEKDMNGENKGFAV 313
Query: 368 VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD---DDGG--- 421
+ F + A+ A LN E+ GR ++++ + Q + A DD G
Sbjct: 314 ITFRNADEAQKACEQLN-DFEVAGRKMRLTIKQEPTPQQSIKKEEASIHQRSLDDVGDRQ 372
Query: 422 GLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 480
G +L A R LM KL + TG + S +A G N Q
Sbjct: 373 GFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAG---NSQ---------------- 413
Query: 481 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV 540
IP++A ++C LL NMFDPA ET+P +D +I+ DV E+C+ +G H++V
Sbjct: 414 -----IPSIA-------TQCFLLSNMFDPAKETEPQWDHDIREDVIEQCACHGGALHVFV 461
Query: 541 DKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
DK S G VY++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 462 DKGSQQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 511
>gi|426232776|ref|XP_004010396.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Ovis aries]
Length = 447
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 195/349 (55%), Gaps = 36/349 (10%)
Query: 180 RERERERELRERERDLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQM 228
R R+ RE R R + RRY +EK V EP PE RD RTVF Q+
Sbjct: 113 RSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPEERDARTVFCMQL 172
Query: 229 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLG 288
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG
Sbjct: 173 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 232
Query: 289 QPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPV 348
P++V+ S+AEKN + + +A G G + +LYVG+LHFN+TE LR +FEPFG +
Sbjct: 233 VPIIVQASQAEKNRLAA--TASNLQKGSGGPV--RLYVGSLHFNITEDMLRGIFEPFGKI 288
Query: 349 ELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQD 407
+ + L D ETG KG+GF+ F+ E A+ A LNG E+ GR +++ VT+ G D
Sbjct: 289 DNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRPMRIGHVTERPDGGTD 347
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAI 466
D + D G +A R L+ KL + +GI + + A A A QA
Sbjct: 348 ITFPDGDQELDLG-----SAGGRLQLVAKLAEGSGIQLPTSTA---AAAAVAQAAAAQAA 399
Query: 467 SLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 509
+L + G AVP+ PA + P N+A++ I S+C L ++F P
Sbjct: 400 ALQLNG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 444
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 183/316 (57%), Gaps = 25/316 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 144 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 203
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 204 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 263
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 264 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 317
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G+ D D + D G +A SR
Sbjct: 318 ECARRALEQLNG-FELAGRPMRVGHVTERLDGSTDITFPDGDQELDLG-----SAGSRLQ 371
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI + A A + A+ L + A+ +P + N+A+
Sbjct: 372 LMAKLAEGSGIQLPTTAAAAAAAAQAAALQLNGAVPLGALNPTAL---TALSPAL-NLAS 427
Query: 492 EFIGSPSECLLLKNMF 507
+ I S+C L ++F
Sbjct: 428 QAIA--SQCFQLSSLF 441
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 192/364 (52%), Gaps = 38/364 (10%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 80 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 138
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 139 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 198
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 199 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 252
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 253 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 311
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATS 445
E+ GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 312 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL- 365
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ +A A + + AVP+ A+ + ++ + S+C L +
Sbjct: 366 --------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSS 416
Query: 506 MFDP 509
+F P
Sbjct: 417 LFTP 420
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 195/349 (55%), Gaps = 36/349 (10%)
Query: 180 RERERERELRERERDLEMRESRRY--------KEKKEVVEP--EADPE-RDQRTVFAYQM 228
R R+ RE R R + RRY +EK V EP PE RD RTVF Q+
Sbjct: 129 RSRDWRREDRVHYRSPPLATGRRYGHSKSSHFREKSPVREPVDNLSPEERDARTVFCMQL 188
Query: 229 PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLG 288
+ RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG
Sbjct: 189 AARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 248
Query: 289 QPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPV 348
P++V+ S+AEKN + + +A G G + +LYVG+LHFN+TE LR +FEPFG +
Sbjct: 249 VPIIVQASQAEKNRLAA--TASNLQKGSGGPV--RLYVGSLHFNITEDMLRGIFEPFGKI 304
Query: 349 ELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQD 407
+ + L D ETG KG+GF+ F+ E A+ A LNG E+ GR +++ VT+ G D
Sbjct: 305 DNIVLMKDSETGCSKGYGFITFSDSECARRALEQLNG-FELAGRPMRIGHVTERPDGGTD 363
Query: 408 TAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAI 466
D + D G +A R L+ KL + +GI + + A A A QA
Sbjct: 364 ITFPDGDQELDLG-----SAGGRLQLVAKLAEGSGIQLPTSTA---AAAAVAQAAAAQAA 415
Query: 467 SLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNMFDP 509
+L + G AVP+ PA + P N+A++ I S+C L ++F P
Sbjct: 416 ALQLNG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSLFTP 460
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 192/364 (52%), Gaps = 38/364 (10%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 124 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 182
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 183 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 242
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 243 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 296
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 297 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 355
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATS 445
E+ GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 356 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL- 409
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ +A A + + AVP+ A+ + ++ + S+C L +
Sbjct: 410 --------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSS 460
Query: 506 MFDP 509
+F P
Sbjct: 461 LFTP 464
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 179/318 (56%), Gaps = 29/318 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 368
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI P +A A + + AVP+ A+ + ++
Sbjct: 369 LMAKLAEGSGIQL---------PTTAAAAAAAAAHAAALQLNGAVPLGALNPAALTALSP 419
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 420 A-LNLASQCFQLSSLFTP 436
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 186/319 (58%), Gaps = 28/319 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK + EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 144 KSPLYREKSPLREPLGSLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 203
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 204 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 263
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LH N+T+ LR +FEPFG ++ + L D +TGQ KG+GF+ F++
Sbjct: 264 -GPM-----RLYVGSLHCNITKEMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEA 317
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + GT D + D+ D GL L A L
Sbjct: 318 ECARRALEQLNG-FELAGRPMRVGQVTERLDGTTDITFPDGN-DEPDRSGLNLGATGSQL 375
Query: 433 -LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
LM KL + +G+ S + A +NG AI L + A+ +P + N+A
Sbjct: 376 QLMAKLAEGSGLPLSTTAAAQAALQLNG------AIPLGALNPAAL---TALSPAL-NLA 425
Query: 491 AEFIGSPSECLLLKNMFDP 509
++ + S+C L +F P
Sbjct: 426 SQTLA--SQCFQLSGLFTP 442
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/232 (46%), Positives = 142/232 (61%), Gaps = 22/232 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DR+SRRSKG+ YIEF + SVP
Sbjct: 35 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRSSRRSKGIAYIEFVEASSVP 94
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---------LVQSNTSAGGTATGPYGAIDRKLYVG 327
+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 95 LAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAAAAAANNLQKG--MMGPL-----RLYVG 147
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG +E +QL +D +TG+ KG+GF+ FA E AK A LNG
Sbjct: 148 SLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQLNG-F 206
Query: 388 EIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL 437
E+ GR +KV VT+ D++ A D +D G+ L R LM +L
Sbjct: 207 ELAGRPMKVGHVTER---SDSSGAPAFLDGEDLERSGIDLGNPGRLQLMAQL 255
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 179/318 (56%), Gaps = 29/318 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 352
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI P +A A + + AVP+ A+ + ++
Sbjct: 353 LMAKLAEGSGIQL---------PTTAAAAAAAAAHAAALQLNGAVPLGALNPAALTALSP 403
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 404 A-LNLASQCFQLSSLFTP 420
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 183/318 (57%), Gaps = 28/318 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 140 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 199
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N GT
Sbjct: 200 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTG 259
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 260 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 313
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A
Sbjct: 314 ECARRAMDQLNG-FELAGRPMRVGHVTEQLDGGTDITFPDGDQELDLG-----SAGGCLQ 367
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI L A +A QA +L + G AVP+ A+ V+ ++
Sbjct: 368 LMAKLAEGSGI------QLPSTTATAAAAAAAQAAALQLNG--AVPLGALNPAVLTALSP 419
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 420 A-LNLASQCFQLSSLFTP 436
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 183/316 (57%), Gaps = 25/316 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 128 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 187
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 188 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 247
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 248 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 301
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G+ D D + D G +A SR
Sbjct: 302 ECARRALEQLNG-FELAGRPMRVGHVTERLDGSTDITFPDGDQELDLG-----SAGSRLQ 355
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI + A A + A+ L + A+ +P + N+A+
Sbjct: 356 LMAKLAEGSGIQLPTTAAAAAAAAQAAALQLNGAVPLGALNPTAL---TALSPAL-NLAS 411
Query: 492 EFIGSPSECLLLKNMF 507
+ I S+C L ++F
Sbjct: 412 QAIA--SQCFQLSSLF 425
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 193/363 (53%), Gaps = 35/363 (9%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 80 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 138
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 139 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 198
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 199 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 252
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG
Sbjct: 253 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-F 311
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSI 446
E+ GR ++V VT+ + G D D + D G +A R LM KL A
Sbjct: 312 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGA 361
Query: 447 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNM 506
L A +A QA +L + G AVP+ A+ + ++ + S+C L ++
Sbjct: 362 GIQLPSTAAAAAAAAAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCFQLSSL 418
Query: 507 FDP 509
F P
Sbjct: 419 FTP 421
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 209/410 (50%), Gaps = 52/410 (12%)
Query: 193 RDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL 252
RD+ R K +E A+ ERDQRT+ Q+ RD+ EFFS G VRDVR+
Sbjct: 93 RDVMPFNPRHSPPKNAKLELSAE-ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRI 151
Query: 253 IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-- 310
I D + RSKG+ Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +++ A
Sbjct: 152 ITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTL 211
Query: 311 -----GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGF 365
G A GP + V NLH + L+ +F+ FG +E +++ + G +GF
Sbjct: 212 GFVAPGAAKGP-----AHVVVENLHPKIDAKMLQGIFDAFGRIEKLEMETE-HNGDNRGF 265
Query: 366 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS----SVTDHVGTQDTAAKSADFDDDDGG 421
+ F E A+ A LN E+ GR +++S +V H + + + + D D
Sbjct: 266 AVISFKNSEEAQKACEQLN-NFELAGRNIRLSIKQDAVPQHKKEEASIHQRSLDDIGDRQ 324
Query: 422 GLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPA 480
G +L A R LM KL + TG + S +A G N Q
Sbjct: 325 GFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAG---NSQ---------------- 365
Query: 481 VTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV 540
IP++A ++C LL NMFDP+ ET+P++D++I+ DV E+C ++G H++V
Sbjct: 366 -----IPSIA-------TQCFLLSNMFDPSKETEPNWDVDIREDVIEQCLQHGGALHVFV 413
Query: 541 DKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
DK S G VY++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 414 DKGSEQGNVYVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 463
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 179/317 (56%), Gaps = 24/317 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 196 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 255
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 256 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 315
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 316 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 369
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 370 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 423
Query: 433 LMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAE 492
LM KL G + + A A +A + A+ L AVP+ A+ + ++
Sbjct: 424 LMAKLAE-GSGIQLPTTAAAAAAAAAAAAHAAALQL----NGAVPLGALNPAALTALSPA 478
Query: 493 FIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 479 -LNLASQCFQLSSLFTP 494
>gi|170284570|gb|AAI61141.1| rbm23 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 155/256 (60%), Gaps = 19/256 (7%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF D+ SVP+AI
Sbjct: 2 RTVFCMQLAARIRSRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQSVPLAIG 61
Query: 281 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
L+GQ LLG P++V+ S+AEKN SN G GP +LYVG+LHFN+TE L
Sbjct: 62 LTGQRLLGVPIIVQVSQAEKNRLAAMSNNLQRGN-PGPM-----RLYVGSLHFNITEDML 115
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
R +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A LNG E+ GR +KV
Sbjct: 116 RGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQLNG-FELAGRPMKVGH 174
Query: 399 VTDHVGTQDTAAKSADFDDDDG---GGLALNAQSRALLMQKL-DRTGIATSIA--GSLGV 452
VTDH+ A F D D G+ L A R LM KL + TG+ +A +L +
Sbjct: 175 VTDHL----EGGGEASFLDSDELERTGIDLGATGRLQLMAKLAEGTGLQIPLAAQAALQL 230
Query: 453 APAVNGSAVNQQAISL 468
A+ +A+N +L
Sbjct: 231 GGAIPLTALNPTLTAL 246
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 203/375 (54%), Gaps = 48/375 (12%)
Query: 142 RRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESR 201
RS S RR S++SR S RR +R R L R + RE+
Sbjct: 80 HRSHSWDRRHSTESR---SWDRRREDRVHYRSPPLATGRRYGHSKSPHFREKS------- 129
Query: 202 RYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
+E + + PE ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRS
Sbjct: 130 PVREPVDNLSPE---ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 186
Query: 262 KGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGA 319
KG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+ GP
Sbjct: 187 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GP--- 242
Query: 320 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 379
+LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F++ E A+ A
Sbjct: 243 --MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRA 300
Query: 380 QSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL- 437
LNG E+ GR ++V VT+ + G D D + D G +A R LM KL
Sbjct: 301 LEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAKLA 354
Query: 438 DRTGI---ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFI 494
+ +GI T+ A +L + AV A+N ++ PA+ N+A++ I
Sbjct: 355 EGSGIQLPTTAAAAALQLNGAVPLGALNPATLT---ALSPAL-----------NLASQAI 400
Query: 495 GSPSECLLLKNMFDP 509
S C L N+F P
Sbjct: 401 A--SHCFQLSNLFSP 413
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 178/318 (55%), Gaps = 27/318 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 368
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI + A A A Q AVP+ A+ + ++
Sbjct: 369 LMAKLAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSP 421
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 422 A-LNLASQCFQLSSLFTP 438
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 178/318 (55%), Gaps = 27/318 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 368
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI + A A A Q AVP+ A+ + ++
Sbjct: 369 LMAKLAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSP 421
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 422 A-LNLASQCFQLSSLFTP 438
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 184/322 (57%), Gaps = 37/322 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 153 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 212
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 213 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 272
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+
Sbjct: 273 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDS 326
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D + D G A R
Sbjct: 327 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQ 380
Query: 433 LMQKL-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP-- 487
LM KL + +GI T+ A + A +NG AV A++ PA + P
Sbjct: 381 LMAKLAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPAL 428
Query: 488 NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 429 NLASQAIA--SQCFQLSSLFTP 448
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 184/322 (57%), Gaps = 37/322 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 151 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 210
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 211 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 270
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+
Sbjct: 271 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDS 324
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D + D G A R
Sbjct: 325 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQ 378
Query: 433 LMQKL-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP-- 487
LM KL + +GI T+ A + A +NG AV A++ PA + P
Sbjct: 379 LMAKLAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPAL 426
Query: 488 NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 427 NLASQAIA--SQCFQLSSLFTP 446
>gi|48146631|emb|CAG33538.1| RNPC4 [Homo sapiens]
Length = 423
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 191/364 (52%), Gaps = 38/364 (10%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 80 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 138
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 139 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 198
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 199 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 252
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+G + F+ E A+ A LNG
Sbjct: 253 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGLITFSDSECARRALEQLNG-F 311
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATS 445
E+ GR ++V VT+ + G D D + D G +A R LM KL + GI
Sbjct: 312 ELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL- 365
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ +A A + + AVP+ A+ + ++ + S+C L +
Sbjct: 366 --------PSTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSS 416
Query: 506 MFDP 509
+F P
Sbjct: 417 LFTP 420
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 178/318 (55%), Gaps = 27/318 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 368
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI + A A A Q AVP+ A+ + ++
Sbjct: 369 LMAKLAEGSGIQLPTTAAAAAAAAAAAHAAALQL-------NGAVPLGALNPAALTALSP 421
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 422 A-LNLASQCFQLSSLFTP 438
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 230/500 (46%), Gaps = 103/500 (20%)
Query: 130 REKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERESERERELELEREREREREL 188
R ++R R G R RS SRS R + R +R+ E+ R
Sbjct: 94 RSRKRNFYRGGGRTRSRSRSPLDDRYYRPTGRARRDGDDRDDEKRRS------------- 140
Query: 189 RERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
R + + EP+ + ERD+RTVF Q+ + +++ FF K G V
Sbjct: 141 -------RRDRDSRRRSPSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPV 193
Query: 248 RDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNT 307
++ +++ DR S RSKGVGY+EF + SVP+AI L+GQ LLG P++ + +EAEKN N
Sbjct: 194 KEAQIVKDRVSGRSKGVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNP 253
Query: 308 SA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKG 364
A + P+ +LYVGN+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG
Sbjct: 254 DAHSNNNQQSIPF----HRLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKG 308
Query: 365 FGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV--------------------------SS 398
+GFVQF A+ A +NG ++ GR ++V S
Sbjct: 309 YGFVQFRDPNQAREALEKMNG-FDLAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSP 367
Query: 399 VTDHVG--------------------TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 438
+ H G A ++ DD D G+ N SR LM+KL
Sbjct: 368 YSHHGGRGANAGGSSGGNFDRAGGRDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLA 427
Query: 439 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPS 498
RT PA + ++ P A PV NMA S
Sbjct: 428 RTD-----------EPAAEPAPDEKRKA-------PKARTEAKPLPVTVNMA-------S 462
Query: 499 ECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEA 557
C+LL+NMFDPA E + E++ DV EC KYG V HI +D + G +YL+F+ +
Sbjct: 463 RCVLLRNMFDPAQEEGESWVKELEDDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQG 522
Query: 558 AASAQRAMHMRWFARRLISA 577
+A + ++ R+F R ISA
Sbjct: 523 GENAIKGLNGRFFGGRQISA 542
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 183/325 (56%), Gaps = 38/325 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 143 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 202
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGT 312
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 203 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG-- 260
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
++GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 SSGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 315
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRA 431
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 316 SECARRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRL 369
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVI 486
LM KL + +GI P +A + + VP+ PA +
Sbjct: 370 QLMAKLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALS 420
Query: 487 P--NMAAEFIGSPSECLLLKNMFDP 509
P N+A++ I S+C L ++F P
Sbjct: 421 PALNLASQAIA--SQCFQLSSLFTP 443
>gi|33150650|gb|AAP97203.1|AF087905_1 splicing factor SF2 [Homo sapiens]
Length = 425
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 192/363 (52%), Gaps = 34/363 (9%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 80 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 138
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 139 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 198
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 199 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 252
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A + L
Sbjct: 253 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRACGTVEWGL 312
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSI 446
++GR ++V VT+ + G D D + D G +A R LM KL A
Sbjct: 313 SLLGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGA 362
Query: 447 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNM 506
L A +A QA +L + G AVP+ A+ + ++ + S+C L ++
Sbjct: 363 GIQLPSTAAAAAAAAAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCFQLSSL 419
Query: 507 FDP 509
F P
Sbjct: 420 FTP 422
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 201/411 (48%), Gaps = 86/411 (20%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVGY+EF SV
Sbjct: 226 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESVA 285
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
A+ L+GQ LLG P++V+P+EAEKN TS + P+ +LYVGN+HF++TET
Sbjct: 286 AALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNSVPF----HRLYVGNIHFSITET 341
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L+ +FEPFG +E VQL D E G+ +G+GFVQF +A+ A +NG ++ GR ++V
Sbjct: 342 DLQHVFEPFGELEFVQLQKD-ENGRSRGYGFVQFRDAANAREALEKMNG-FDLAGRPIRV 399
Query: 397 -----------------------------------SSVTDHVGTQDT--AAKSADFDDDD 419
+S D G +D+ + ++ DD D
Sbjct: 400 GLGNDKFTPESTANLLRGFPGQGSAFSGAGGRGPPASTFDRAGGRDSDKVSGASALDDTD 459
Query: 420 GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVP 479
G+ N SR LM+KL RT + A +Q + V +PV
Sbjct: 460 VAGVNFNNYSRDALMRKLART----------------DEPAPERQILKPKTVETKPLPVN 503
Query: 480 AVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHI 538
NMA+ G D+ E++ +V +E KYG V HI
Sbjct: 504 V-------NMASRQQGE-------------------DWIKELEDEVRQEAEEKYGHVVHI 537
Query: 539 YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
VD S G +YL+F+ + +A + ++ R+F R+I+A + Y + F
Sbjct: 538 AVDPNSNGDIYLKFDKVQGGENAIKGLNGRYFDGRMITAAPVVDAVYSSLF 588
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 224/449 (49%), Gaps = 88/449 (19%)
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERD 236
E+E + R +L++ ++E +R KE++E + R TV + +K TER+
Sbjct: 89 EIEEAKLRAEKLKQ------IKEFKRNKEQEEAM-------RTDLTVLVANLHMKITERE 135
Query: 237 VYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKP 295
+YE FS AGK+RD++L+ D+ + R KGV Y+EFY SV A+++SG LL QP+ V
Sbjct: 136 IYELFSDGAGKIRDIQLVRDQRTGRPKGVAYVEFYTNDSVIKALSMSGHFLLNQPIRVTA 195
Query: 296 SEAEKNL-------VQSNTSAGGTATGPYGAIDRKLYVGNL---HFNMTETQLRKLFEPF 345
S+AEKN Q+N S + +LYVG L N++E +LR+LF PF
Sbjct: 196 SQAEKNRAAKASKEFQTNES----------EMPLRLYVGGLVDSLVNISENELRQLFVPF 245
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH--- 402
G + V+L D TG+ KGF F+++ + A+ A A++G EI GR +KV+ +D+
Sbjct: 246 GEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDG-FEISGRNIKVNLTSDNRPN 304
Query: 403 -----VGTQDTAAKSADFD----------DDDGGGLALNAQSRALLMQKLDRTG-IATSI 446
G + + D D D D L A S+ LM++L+R G + TS
Sbjct: 305 AYTALNGLNNAQKITNDLDRLEKEKMEEYDSD---LMPGAVSKIELMKRLNRDGDLPTSN 361
Query: 447 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNM 506
SL A + P V P +A V +E ++L NM
Sbjct: 362 KTSLDAAKVI-----------------PGVSAPGNSATV----------GVTENIVLSNM 394
Query: 507 F---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQ 562
F DP + DP+F ++ DV+ EC KYG V +Y++K G V+++F + E A +A
Sbjct: 395 FSATDPQIMEDPEFFTDLVEDVKSECKKYGNVLQVYINKSVPDGMVWVKFATVEQAVAAF 454
Query: 563 RAMHMRWFARRLISAIFMKPEDYEAKFKS 591
++++ R+F ISA F + + K+
Sbjct: 455 QSLNDRFFGGNSISAAFATNHTWLSTCKA 483
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 368
Query: 433 LMQKL 437
LM KL
Sbjct: 369 LMAKL 373
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 179/323 (55%), Gaps = 34/323 (10%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 142 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 201
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 202 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 261
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 262 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 315
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 316 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 369
Query: 433 LMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP- 487
LM KL GS P +A + + VP+ PA + P
Sbjct: 370 LMAKLAE--------GSGMQLPTTTAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPA 421
Query: 488 -NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 422 LNLASQAIA--SQCFQLSSLFTP 442
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 200/410 (48%), Gaps = 72/410 (17%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
RD TV + LKA ERD+YEFFS+ AGKVRD++ I D+ S +SKGV Y+EFY +V
Sbjct: 590 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVV 649
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL---HFNM 333
A++ +G +L +P+ ++ S+AEKN ++ +A P I KLY+G L N+
Sbjct: 650 KALSANGYMLKNRPIKIQSSQAEKN--RAAKAAKHQPIDP-NDIPIKLYIGGLVGPLGNI 706
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
+E +L++LF PFG + V++ D TG+CKGFGF+QF + A A LNG +EI GR
Sbjct: 707 SEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNG-MEIAGRE 765
Query: 394 LKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALL-------------------- 433
LKVS D S+ +L
Sbjct: 766 LKVSFAQD---------------------------SKYILASEKEAKEKVLAKLMAKKAK 798
Query: 434 ----MQKLDRTGIATS-------IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVT 482
+++ D I IAG+ G A+ + + Q A+
Sbjct: 799 AEEKVEEPDNEKIDNDDDDGGGLIAGA-GSKIALMQKLQRDTILDSGISSQFTTGANAIM 857
Query: 483 APVIPNMA-AEFIGSPSECLLLKNMFDPAME---TDPDFDLEIQGDVEEECSKYGRVKHI 538
A + + + + L+L NMF P E +DPDF +I DV+EECSKYG + I
Sbjct: 858 QTTSLGAAQSNTLNNITPNLVLCNMFSPNDENIGSDPDFFSDIIEDVKEECSKYGSITKI 917
Query: 539 YVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEA 587
++D ++ G +Y+++ + A A + ++ R+F LI+A F+ E + +
Sbjct: 918 WMDTKNIDGKIYIKYTKQDEAFKAFQFLNGRYFGGSLINAYFVTEEMWNS 967
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 167/301 (55%), Gaps = 36/301 (11%)
Query: 292 MVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
MV+ ++AEKN +Q+ A + TGP +LYVG+LHFN+TE LR +FEPFG ++
Sbjct: 1 MVQHTQAEKNRLQNAAPAFQPKSHTGP-----MRLYVGSLHFNITEDMLRGIFEPFGKID 55
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA 409
+QL +D ETG+ KG+GF+ + + AK A LNG E+ GR +KV +VT+ + D
Sbjct: 56 AIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNG-FELAGRLMKVGNVTERL---DMN 111
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
S D D+ D G+ L A R LM KL G AV Q A +
Sbjct: 112 TTSLDTDEMDRTGIDLGATGRLQLMFKLAEGA----------------GLAVPQAAANAL 155
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+ P P P V P++A ++C +L NMFDP ET+P +D+EI+ DV EEC
Sbjct: 156 LATAPQ-PAPLQQQEVAPSIA-------TQCFILSNMFDPRTETNPTWDVEIRDDVLEEC 207
Query: 530 SKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
+K+G V HI+VD S G VY++ ST A A A+H RWFA R+I+A ++ +Y
Sbjct: 208 AKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINYHTM 267
Query: 589 F 589
F
Sbjct: 268 F 268
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|444728803|gb|ELW69245.1| putative RNA-binding protein 23 [Tupaia chinensis]
Length = 450
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 163/284 (57%), Gaps = 31/284 (10%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 129 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 188
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 189 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 248
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 249 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 302
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ G+ D D + D G +A R
Sbjct: 303 ECARRALEQLNG-FELAGRPMRVGHVTERADGSTDITFPDGDQELDLG-----SAGGRLQ 356
Query: 433 LMQKLDRTGIATSIAGSLGVAPAVN--GSAVNQQAISLPVVGQP 474
LM KL ++PA+N A+ Q L + P
Sbjct: 357 LMAKLAEA-----------LSPALNLASQAIASQCFQLSSLFTP 389
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/322 (41%), Positives = 184/322 (57%), Gaps = 37/322 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S Y+EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 135 KSPHYREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 194
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 195 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 254
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KGFGF+ F+
Sbjct: 255 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDS 308
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D + D G A R
Sbjct: 309 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQ 362
Query: 433 LMQKL-DRTGI--ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP-- 487
LM KL + +GI T+ A + A +NG AV A++ PA + P
Sbjct: 363 LMAKLAEGSGIQLPTTAAAAQAAALQLNG-AVPLGALN-----------PAALTALSPAL 410
Query: 488 NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 411 NLASQAIA--SQCFQLSSLFTP 430
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 200/416 (48%), Gaps = 91/416 (21%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF + SVP
Sbjct: 192 ERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVP 251
Query: 277 MAIALSGQLLLGQPVMVKP-----SEAEKNLVQSNT---SAGGTATGPYGAIDRKLYVGN 328
+AI L+GQ L + P +EAEKN N S+ + P+ +LYVGN
Sbjct: 252 LAIQLTGQKL-----LGIPIIAQLTEAEKNRQARNPDAHSSNNQQSIPF----HRLYVGN 302
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
+HF++TE+ L+ +FEPFG ++ VQL + E G+ KG+GFVQF A+ A +NG +
Sbjct: 303 IHFSITESDLQNVFEPFGELDFVQLQRE-EAGRSKGYGFVQFRDPNQAREALEKMNG-FD 360
Query: 389 IVGRTLKV--------------------------SSVTDHVG------------------ 404
+ GR ++V SS + H G
Sbjct: 361 LAGRPIRVGLGNDKFSHDPAQLMQRLQQQGHNQGSSYSHHGGRGANAGGSSGGNFDRAGG 420
Query: 405 --TQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 462
A ++ DD D G+ N SR LM+KL RT PA +
Sbjct: 421 RDNDKGAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAAEPAPDE 469
Query: 463 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQ 522
++ P A PV NMA S C+LL+NMFDPA E + E++
Sbjct: 470 KRK-------APKARTEAKPLPVTVNMA-------SRCVLLRNMFDPAQEEGESWVKELE 515
Query: 523 GDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 516 DDVRAECEEKYGHVVHISLDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 571
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 183/325 (56%), Gaps = 38/325 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 127 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 186
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGT 312
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 187 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG-- 244
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
++GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 SSGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 299
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRA 431
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 300 SECARRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRL 353
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVI 486
LM KL + +GI P +A + + VP+ PA +
Sbjct: 354 QLMAKLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALS 404
Query: 487 P--NMAAEFIGSPSECLLLKNMFDP 509
P N+A++ I S+C L ++F P
Sbjct: 405 PALNLASQAIA--SQCFQLSSLFTP 427
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 166/295 (56%), Gaps = 34/295 (11%)
Query: 149 RRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKE 208
RR SS+ R SR RR +R S R L + S ++EK
Sbjct: 32 RRHSSELR---SRDRRHEDRVSYRSPPLAAGYRYGHSK-------------SPHFREKSP 75
Query: 209 VVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+
Sbjct: 76 VREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIA 135
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRK 323
Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+ GP +
Sbjct: 136 YVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----R 189
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A L
Sbjct: 190 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 249
Query: 384 NGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
NG E+ GR ++V VT+ + G D D + D G +A R LM KL
Sbjct: 250 NG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDPG-----SAGGRLQLMAKL 298
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 175/318 (55%), Gaps = 31/318 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 368
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + GI + A +N AVP+ A+ + ++
Sbjct: 369 LMAKLAEGAGIQLPTTATAAAAAQAAALQLNG-----------AVPLGALNPAALTALSP 417
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 418 A-LNLASQCFQLSSLFTP 434
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 187/319 (58%), Gaps = 26/319 (8%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 142 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 201
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGT 312
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 202 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG-- 259
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
++GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 260 SSGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 314
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRA 431
E A+ A LNG E+ GR ++V VT+ + G D + + D G +A R
Sbjct: 315 SECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGEQELDLG-----SAGGRL 368
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
LM KL + +GI + A A +A+ ++P+ G + A++ + N+A
Sbjct: 369 QLMAKLAEGSGIQLPTTAAAAAAAAQAAAALQLNG-TVPLGGLNPAALTALSPAL--NLA 425
Query: 491 AEFIGSPSECLLLKNMFDP 509
++ I S+C L ++F P
Sbjct: 426 SQAIA--SQCFQLSSLFTP 442
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 368
Query: 433 LMQKL 437
LM KL
Sbjct: 369 LMAKL 373
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 179/323 (55%), Gaps = 34/323 (10%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 126 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 185
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 186 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 245
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 246 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 299
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 300 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 353
Query: 433 LMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP- 487
LM KL GS P +A + + VP+ PA + P
Sbjct: 354 LMAKLAE--------GSGMQLPTTTAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPA 405
Query: 488 -NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 406 LNLASQAIA--SQCFQLSSLFTP 426
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 190/353 (53%), Gaps = 31/353 (8%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
Query: 280 ALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 337
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE
Sbjct: 191 GLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDM 244
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 245 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVG 303
Query: 398 SVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 456
VT+ + G D D + D G +A R LM KL A L A
Sbjct: 304 HVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQLPSTAAA 353
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
+A QA +L + G AVP+ A+ + ++ + S+CL L ++F P
Sbjct: 354 AAAAAAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCLQLSSLFTP 403
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 179/318 (56%), Gaps = 29/318 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S +KEK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFKEKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRPAAMANNLQKGSG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 352
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAA 491
LM KL + +GI P +A A + + AVP+ A+ + ++
Sbjct: 353 LMAKLAEGSGIQL---------PTTAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSP 403
Query: 492 EFIGSPSECLLLKNMFDP 509
+ S+C L ++F P
Sbjct: 404 A-LNLASQCFQLSSLFTP 420
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 188/354 (53%), Gaps = 34/354 (9%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
Query: 280 ALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 337
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE
Sbjct: 191 GLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDM 244
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 245 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVG 303
Query: 398 SVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPA 455
VT+ + G D D + D G +A R LM KL + GI P+
Sbjct: 304 HVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---------PS 349
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
+A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 350 TAAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 402
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 188/353 (53%), Gaps = 34/353 (9%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 124 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATG----EPVDNLSPE---ERDA 175
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI
Sbjct: 176 RTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 235
Query: 281 LSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE L
Sbjct: 236 LTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDML 289
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
R +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 290 RGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGH 348
Query: 399 VTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAV 456
VT+ + G D D + D G +A R LM KL + GI P+
Sbjct: 349 VTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKLAEGAGIQL---------PST 394
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
+A A + + AVP+ A+ + ++ + S+C L ++F P
Sbjct: 395 AAAAAAAAAQAAALQLNGAVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 446
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 368
Query: 433 LMQKL 437
LM KL
Sbjct: 369 LMAKL 373
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 170/303 (56%), Gaps = 27/303 (8%)
Query: 141 ERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRES 200
E + S RS S RR S SR R+ RE +R R L R +S
Sbjct: 70 EVQVGSVVTRSRSWDRRHGSESR---SRDHRRE-----DRVHYRSPPLTTGYR-YGHSKS 120
Query: 201 RRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRN
Sbjct: 121 PHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 180
Query: 258 SRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATG 315
SRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G G
Sbjct: 181 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-G 239
Query: 316 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
P +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E
Sbjct: 240 PM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSEC 294
Query: 376 AKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLM 434
A+ A LNG E+ GR ++V VT+ + G D D + D G +A R LM
Sbjct: 295 ARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLM 348
Query: 435 QKL 437
KL
Sbjct: 349 AKL 351
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 205/445 (46%), Gaps = 100/445 (22%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIE 268
PE D + ++R+VF Q+ + ++RD+ EFF G V+DVR++MDR +RRSKGVGY+E
Sbjct: 266 PEID-DYEERSVFCAQLSARLSQRDLGEFFEDHLGEGAVQDVRIVMDRLTRRSKGVGYVE 324
Query: 269 FYDVMSVPMAIALSGQLLLG-------------QPVMVKPSEA----------------- 298
F VP AI LSG+ L G P P +A
Sbjct: 325 FAARELVPKAIELSGKDLFGIPIIVQRTDAPRNGPAYAGPGDASARNGLTPHPAVPQLDP 384
Query: 299 ----EKNLVQSNTSAGG--------------TATGP-YGAIDRKLYVGNLHFNMTETQLR 339
L +AG GP + +LYVG+LHF++T+ ++
Sbjct: 385 RVLANAPLPMQYHTAGAPIHMNVAPPQAPRAPRPGPNMPNTEARLYVGSLHFSLTDENVK 444
Query: 340 KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 399
+FEPFG +E V L + TG+ KGF F+QF E AK A +NG E+ GR ++V +V
Sbjct: 445 AVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALEQMNG-FELAGRAIRVGNV 503
Query: 400 ----TDHVGTQDTAAKSADFDD----------DDGGGLALNAQSRALLMQKLDRTGIATS 445
T G+ + DDGGG LN + RA LM+KL R
Sbjct: 504 NAKGTGSAGSYSNGSCPGSEGGGHLPQLTSAFDDGGGAGLNPERRAALMEKLARN----- 558
Query: 446 IAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKN 505
P+ + T+ +I A S S LLLKN
Sbjct: 559 --------------------------NDPSPTISEATSAMIQERPAGIPESTSTSLLLKN 592
Query: 506 MFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRA 564
MF+PA ET+ +D ++ DV++EC +KYG V I+V+K SAG VY+ F + + + A
Sbjct: 593 MFNPAEETEQGWDKDLAEDVKDECHAKYGAVTSIHVEKDSAGEVYVTFANLDGSRKALEG 652
Query: 565 MHMRWFARRLISAIFMKPEDYEAKF 589
++ R+F + ISA ++ +AK
Sbjct: 653 LNGRFFGGKPISAQYIPDAFVQAKL 677
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 150/245 (61%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 182/324 (56%), Gaps = 38/324 (11%)
Query: 196 EMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+RE ++ + + PE ERD RTV Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 130 HIREKSPVRQPVDNLSPE---ERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 186
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF D+ +VP+AI L+GQ LLG P+MV+ S+AEKN +N G+
Sbjct: 187 RNSRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQKGSG 246
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 247 -GPL-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDS 300
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E + A LNG E+ GR ++V VT+ GT D D + D G + R
Sbjct: 301 ECGRRALEQLNG-FELAGRPMRVGHVTERPDGTTDITFPDGDQELDLG-----SPGGRLQ 354
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP 487
LM KL + +GI P +A QA +L + G AVP+ PA + P
Sbjct: 355 LMAKLAEGSGIQL---------PTTAVAAAAAQAAALQLNG--AVPLGALNPAALTALSP 403
Query: 488 --NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 404 ALNLASQAIA--SQCFQLSSLFTP 425
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 204/401 (50%), Gaps = 56/401 (13%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
K K + PE ERDQRT+ Q+ RD+ EFFS G VRDVR+I D + RSKG
Sbjct: 227 KNAKLELSPE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKG 283
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-------GTATGP 316
+ Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N +++ A G A GP
Sbjct: 284 ICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGP 343
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+ V NLH +TE +R++FE FG +E +++ + G + + F + A
Sbjct: 344 -----AHVLVENLHPKITENMIREIFESFGRIEKLEME-KLSNGDNRETAVIVFRNADEA 397
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTD-----HVGTQDTAAKSADFDD-DDGGGLALNAQSR 430
+ + LN E+ GR +++S D + ++ + DD D G +L A R
Sbjct: 398 QKSIEQLN-NFELAGRQIRLSIKQDAPPPPQIKKEEASIHQRSLDDVGDRQGFSLGAGGR 456
Query: 431 ALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM 489
LM KL + TG + S +A G N Q IP++
Sbjct: 457 QQLMAKLAQGTGSGMELTASAQMAAQHAG---NSQ---------------------IPSI 492
Query: 490 AAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFV 548
A ++C LL NMFDP+ ET+P +D +I+ DV E+C+++G H++VDK S G V
Sbjct: 493 A-------TQCFLLSNMFDPSKETEPAWDHDIREDVIEQCAQHGGALHVFVDKGSEQGNV 545
Query: 549 YLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
Y++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 546 YVKCPSIAIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 586
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 189/353 (53%), Gaps = 31/353 (8%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
R R R R +R E R R+ RE R R + E + + PE ERD
Sbjct: 79 GRQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLTTG----EPVDNLSPE---ERD 130
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI
Sbjct: 131 ARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 190
Query: 280 ALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 337
L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE
Sbjct: 191 GLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDM 244
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V
Sbjct: 245 LRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVG 303
Query: 398 SVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 456
VT+ + G D D + D G +A R LM KL A L A
Sbjct: 304 HVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL-----AEGAGIQLPSTAAA 353
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP 509
+A QA +L + G AVP+ A+ + ++ + S+C L ++F P
Sbjct: 354 AAAAAAAQAAALQLNG--AVPLGALNPAALTALSPA-LNLASQCFQLSSLFTP 403
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 352
Query: 433 LMQKL 437
LM KL
Sbjct: 353 LMAKL 357
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 368
Query: 433 LMQKL 437
L+ KL
Sbjct: 369 LIAKL 373
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 196/408 (48%), Gaps = 90/408 (22%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RT+F Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF D SV
Sbjct: 170 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDESSVA 229
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNT--SAGGTATGPYGAIDRKLYVGNLHFNMT 334
AI L+GQ LLG P++ + +EAEKN N+ S+G + P+ +LYVGN+HF++
Sbjct: 230 PAIQLTGQKLLGIPIIAQLTEAEKNRQARNSEASSGNKHSAPF----HRLYVGNIHFSID 285
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L+ +FEPFG +E VQL D ETG+ +G+GFVQF A+ A +NG ++ GR +
Sbjct: 286 ENDLQSVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQAREALEKMNG-YDLGGRAI 343
Query: 395 KVSSVTDHV---GTQDTAAKSAD------------------------------------- 414
+V D TQ T ++SA+
Sbjct: 344 RVGLGNDKFTPENTQRTQSQSANQSNFQGSMFSGSGGRGVQAGGTSNFDRAGGREPEKGT 403
Query: 415 ----FDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPV 470
DD D G+ N SR LM+KL RT PA + QQ I LP
Sbjct: 404 AASALDDTDVAGVNFNNFSRDALMRKLARTD-----------EPAEPSADDKQQKILLP- 451
Query: 471 VGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECS 530
P P PV NMA+ E + E++ DV EC
Sbjct: 452 ---KTEPKPL---PVNVNMASR-------------------EEGESWVKELEDDVRAECE 486
Query: 531 -KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
KYG V HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 487 EKYGHVVHIALDPNSQGDIYLKFDRVQGGENAIKGLNGRFFGGRQITA 534
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 183/325 (56%), Gaps = 38/325 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S +++K + EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 146 KSPHFRDKSPIREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 205
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGT 312
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 206 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQQLLGVPIIVQASQAEKNRLAAMANNLQKG-- 263
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
++GP L+VG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 264 SSGPM-----HLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 318
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRA 431
E A+ A LNG E+ GR +KV VT+ + G D D + D G + R
Sbjct: 319 SECARRALEQLNG-FELAGRPMKVGQVTERLDGGTDITFPDGDQELDLG-----STGGRL 372
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVI 486
LM KL + +GI P +A A + + AVP+ PA +
Sbjct: 373 QLMAKLAEGSGIQL---------PTAAATAAAAAAQAAALQLNGAVPLGALNPAALTALS 423
Query: 487 P--NMAAEFIGSPSECLLLKNMFDP 509
P N+A++ I S+C L ++F P
Sbjct: 424 PALNLASQAIA--SQCFQLSSLFTP 446
>gi|281343373|gb|EFB18957.1| hypothetical protein PANDA_015655 [Ailuropoda melanoleuca]
Length = 369
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 183/325 (56%), Gaps = 38/325 (11%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 66 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 125
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGT 312
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 126 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG-- 183
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
++GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+
Sbjct: 184 SSGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSD 238
Query: 373 LEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRA 431
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 239 SECARRALEQLNG-FELAGRPMRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRL 292
Query: 432 LLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVI 486
LM KL + +GI P +A + + VP+ PA +
Sbjct: 293 QLMAKLAEGSGIQL---------PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALS 343
Query: 487 P--NMAAEFIGSPSECLLLKNMFDP 509
P N+A++ I S+C L ++F P
Sbjct: 344 PALNLASQAIA--SQCFQLSSLFTP 366
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 314
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 315 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 368
Query: 433 LMQKL 437
L+ KL
Sbjct: 369 LIAKL 373
>gi|428672327|gb|EKX73241.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 511
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 220/423 (52%), Gaps = 93/423 (21%)
Query: 191 RERDLEMRESRRYKEKKEVVE-PEA---------------DPERDQRTVFAYQMPLKATE 234
R RD+E ++ +E++ VVE PE + +R TV + L A E
Sbjct: 129 RHRDVE----KKTREQENVVEDPEVVRRRELELKRRKEIEEAQRADLTVLVINLSLSADE 184
Query: 235 RDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMV 293
RD+YE FS+ AGKVRD++ + D S +SKG+ Y+EFY SV A++++G L GQ + +
Sbjct: 185 RDIYELFSEHAGKVRDIQCVRDLRSGKSKGIAYVEFYTQESVIKALSMTGLDLKGQRIKI 244
Query: 294 KPSEAEKN-------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT---ETQLRKLFE 343
+ S+AEKN ++Q +A + P+ +YVG L ++ E +L++LF
Sbjct: 245 QSSQAEKNRAAKAAKMLQQ--TAMDASDSPF-----TIYVGGLIGALSALNEVELKQLFS 297
Query: 344 PFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 403
PFG + V++ D ETG+ KG+ F++F + AK A + +NG +I G+ +KV ++
Sbjct: 298 PFGTIIDVEIFRDPETGESKGYAFLKFRRSSEAKEAMNTMNG-FDIGGQQIKVGYA--NL 354
Query: 404 GTQDTAAKSA---DFD----DDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAV 456
T D+ ++ + D D DDDGGGL A ++ LM+KL RT
Sbjct: 355 NTTDSKSRLSSLGDVDIERLDDDGGGLISGATNKIALMEKLQRT---------------- 398
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF---DPAMET 513
AP+ ++ P+ ++L NMF DP +
Sbjct: 399 ------------------------TAAPISATFSSGKASGPTSNIILSNMFTANDPGAD- 433
Query: 514 DPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFAR 572
+P+F +EI+ DV+EEC KYG+V +Y++K++ G V+++F+++ A++A + ++ R+FA
Sbjct: 434 EPNFFVEIEEDVKEECEKYGKVVAVYLNKKTIDGKVWVKFQNSTDASTAYKGLNGRYFAG 493
Query: 573 RLI 575
I
Sbjct: 494 NTI 496
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 173/295 (58%), Gaps = 22/295 (7%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 131 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 190
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+T
Sbjct: 191 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNIT 244
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR +
Sbjct: 245 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPM 303
Query: 395 KVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGV 452
+V VT+ + G+ D D + D G +A SR LM KL + +GI +
Sbjct: 304 RVGHVTERLDGSTDITFPDGDQELDLG-----SAGSRLQLMAKLAEGSGIQLPTTAAAAA 358
Query: 453 APAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF 507
A A + A+ L + A+ +P + N+A++ I S+C L ++F
Sbjct: 359 AAAQAAALQLNGAVPLGALNPTAL---TALSPAL-NLASQAIA--SQCFQLSSLF 407
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 352
Query: 433 LMQKL 437
L+ KL
Sbjct: 353 LIAKL 357
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/245 (44%), Positives = 149/245 (60%), Gaps = 18/245 (7%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 125 KSPHFREKSPVREPIDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 184
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 185 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 244
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG KG+GF+ F+
Sbjct: 245 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDS 298
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR ++V VT+ + G D D + D G +A R
Sbjct: 299 ECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQ 352
Query: 433 LMQKL 437
L+ KL
Sbjct: 353 LIAKL 357
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 196/383 (51%), Gaps = 45/383 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERDQRT+ Q+ RD+ EFFS G VRDVR+I D + RSKG+ Y+EF+D SVP
Sbjct: 21 ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVP 80
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
+ +AL+GQ L+G P+ ++ + AE+N +++ A G A G G + V NLH +
Sbjct: 81 LGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGP--THVLVENLHPKI 138
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
E +R +FE FG +E + L +D + +GF + F + A+ + LN E+ GR
Sbjct: 139 DEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNADDAQKSCEQLN-NFELAGRC 196
Query: 394 LKVS----SVTDHVGTQDTAAKSADFDD-DDGGGLALNAQSRALLMQKLDR-TGIATSIA 447
+++S S V ++ + DD D G +L A R LM KL + TG +
Sbjct: 197 IRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTGSGMELT 256
Query: 448 GSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF 507
S +A G + IP++A ++C LL NMF
Sbjct: 257 ASAQMAAQHAGHS------------------------QIPSIA-------TQCFLLSNMF 285
Query: 508 DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMH 566
DP+ ET+P +D +I+ DV E+C +G H++VDK S G VY++ S A A A+H
Sbjct: 286 DPSKETEPAWDHDIREDVIEQCLAHGGALHVFVDKGSEQGNVYVKCPSIVIAHQAVSALH 345
Query: 567 MRWFARRLISAIFMKPEDYEAKF 589
RWF+ ++I+A ++ Y F
Sbjct: 346 GRWFSGKVITANYVPVNSYHDLF 368
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 156/265 (58%), Gaps = 32/265 (12%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+E + ++ PE ERD RTVF Q+ + RD+ +FFS GKVRDV++I DRNSRRSKG
Sbjct: 139 REPEAILSPE---ERDARTVFCMQLAARIRSRDLEDFFSAVGKVRDVKIISDRNSRRSKG 195
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + + ++ G +G + +
Sbjct: 196 IAYVEFCEIHSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMSN--NLQRGNFGPM--R 251
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LYVG+LHFN+TE LR +FEPFG +E +QL + +TG+ KGFGF+ F E A+ A L
Sbjct: 252 LYVGSLHFNITEEMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 311
Query: 384 NG-----KLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG---GGLALNAQSRALLMQ 435
NG K VG HV T A F D D G+ L A R LM
Sbjct: 312 NGFELAGKPMKVG----------HV----TGGGDASFLDSDELERNGIGLGATGRLQLMA 357
Query: 436 KLDR-TGIATSIAGSLGVAPAVNGS 459
KL + TG+ +A A +NG+
Sbjct: 358 KLAQGTGLQIPLAAQ--AALQLNGA 380
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 140/224 (62%), Gaps = 15/224 (6%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 187
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+T
Sbjct: 188 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNIT 241
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR +
Sbjct: 242 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPM 300
Query: 395 KVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
+V VT+ + G D D + D G +A R LM KL
Sbjct: 301 RVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRFQLMAKL 339
>gi|291403539|ref|XP_002718108.1| PREDICTED: RNA binding motif protein 23 isoform 1 [Oryctolagus
cuniculus]
Length = 410
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 173/303 (57%), Gaps = 35/303 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTV Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF D+ +VP
Sbjct: 130 ERDARTVLCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCDIQAVP 189
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P+MV+ S+AEKN +N G+ GP +LYVG+LHFN+T
Sbjct: 190 LAIGLTGQRLLGVPIMVQASQAEKNRLAAMANNLQKGSG-GPL-----RLYVGSLHFNIT 243
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E + A LNG E+ GR +
Sbjct: 244 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALEQLNG-FELAGRPM 302
Query: 395 KVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGV 452
+V VT+ GT D D + D G + R LM KL + +GI
Sbjct: 303 RVGHVTERPDGTTDITFPDGDQELDLG-----SPGGRLQLMAKLAEGSGIQL-------- 349
Query: 453 APAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKNM 506
P +A QA +L + G AVP+ PA + P N+A++ I S+C L ++
Sbjct: 350 -PTTAVAAAAAQAAALQLNG--AVPLGALNPAALTALSPALNLASQAIA--SQCFQLSSL 404
Query: 507 FDP 509
F P
Sbjct: 405 FTP 407
>gi|301781272|ref|XP_002926047.1| PREDICTED: probable RNA-binding protein 23-like isoform 3
[Ailuropoda melanoleuca]
Length = 412
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 173/304 (56%), Gaps = 35/304 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 130 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 189
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++V+ S+AEKN + +N G ++GP +LYVG+LHFN+
Sbjct: 190 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGPM-----RLYVGSLHFNI 242
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR
Sbjct: 243 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRP 301
Query: 394 LKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLG 451
++V VT+ + G D D + D G +A R LM KL + +GI
Sbjct: 302 MRVGQVTERLDGGIDITFPDGDQELDLG-----SAGGRLQLMAKLAEGSGIQL------- 349
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP--NMAAEFIGSPSECLLLKN 505
P +A + + VP+ PA + P N+A++ I S+C L +
Sbjct: 350 --PTTAAAAAAAAQAAAALQLNGTVPLGALNPAALTALSPALNLASQAIA--SQCFQLSS 405
Query: 506 MFDP 509
+F P
Sbjct: 406 LFTP 409
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 140/224 (62%), Gaps = 15/224 (6%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 187
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+T
Sbjct: 188 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNIT 241
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR +
Sbjct: 242 EDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPM 300
Query: 395 KVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
+V VT+ + G D D + D G +A R LM KL
Sbjct: 301 RVGHVTERLDGGTDITFPDGDQELDLG-----SAGGRLQLMAKL 339
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 192/432 (44%), Gaps = 123/432 (28%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + +++ FF K G V++ +++ DR S RSKGVGY+EF D SVP
Sbjct: 165 ERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKDESSVP 224
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--------------------LVQSNTSAGGTATGP 316
+AI L+GQ LLG P++ + +EAEKN L N
Sbjct: 225 LAIQLTGQKLLGIPIIAQLTEAEKNRQARNPEASSGQSASAPFHRLYVGNI--------- 275
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
HF++TE ++ +FEPFG +E VQL D ETG+ +G+GFVQF A
Sbjct: 276 -------------HFSITENDIQNVFEPFGELEFVQLQKD-ETGRSRGYGFVQFRDPNQA 321
Query: 377 KAAQSALNGKLEIVGRTLKVS--------------------------------------- 397
+ A +NG ++ GR ++V
Sbjct: 322 REALEKMNG-FDLAGRPIRVGLGNDKFTPESTANLLQRFQGREQNQQFQGSLFSGHGGRG 380
Query: 398 -------SVTDHVGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIA 447
S D G +DT ++ DD D G+ N SR LM+KL RT
Sbjct: 381 AQAGGTPSNFDRAGGRDTDKGTGGASALDDTDVAGVNFNNYSRDALMRKLART------- 433
Query: 448 GSLGVAPAVNGSAVNQQAISLPVVGQPAVP-VPAVTAPVIPNMAAEFIGSPSECLLLKNM 506
++ S QP P PV NMA S C+LL+NM
Sbjct: 434 --------------DEPEPSADEKSQPLRPKTEPKPLPVNVNMA-------SRCVLLRNM 472
Query: 507 FDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAM 565
FDPA E + E++ DV EC KYG V HI +D S G +YL+F+ + +A + +
Sbjct: 473 FDPAEEEGEAWIKELEDDVRAECEEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGL 532
Query: 566 HMRWFARRLISA 577
+ R+F R ISA
Sbjct: 533 NGRFFGGRQISA 544
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 183/324 (56%), Gaps = 32/324 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 216 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 275
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+
Sbjct: 276 -GPV-----RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDS 329
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR +++ VT+ G D D + D G +A
Sbjct: 330 ECARRALEQLNG-FELAGRPMRIGHVTERPDGGTDITFPDGDQELDLG-----SAGGHLQ 383
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP 487
LM KL + +GI + A A A QA +L + G AVP+ PA + P
Sbjct: 384 LMAKLAEGSGIQLP---TTTAAAAAVAQAAAAQAAALQLNG--AVPLGALNPAALTALSP 438
Query: 488 --NMAAEFIGSPSECLLLKNMFDP 509
N+A++ I S+C L ++F P
Sbjct: 439 ALNLASQAIA--SQCFQLSSLFTP 460
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 178/301 (59%), Gaps = 34/301 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 138 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 197
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G+ GP +LYVG+LHFN+T
Sbjct: 198 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG-GPM-----RLYVGSLHFNIT 251
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG+ KGFGF+ F+ E A+ A LNG E+ GR +
Sbjct: 252 EDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQLNG-FELAGRPM 310
Query: 395 KVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGI--ATSIAGSL 450
+V VT+ + G D + D G A R LM KL + +GI T+ A +
Sbjct: 311 RVGHVTERLDGGTDITFPDGGEELDLG-----TAGGRLQLMAKLAEGSGIQLPTTAAAAQ 365
Query: 451 GVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSECLLLKNMFD 508
A +NG AV A++ PA A+TA P + N+A++ I S+C L ++F
Sbjct: 366 AAALQLNG-AVPLGALN------PA----ALTALSPAL-NLASQAIA--SQCFQLSSLFT 411
Query: 509 P 509
P
Sbjct: 412 P 412
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 208/442 (47%), Gaps = 111/442 (25%)
Query: 183 ERER-------ELRERERDLEMR----------------------ESRRYKEKKEVVEPE 213
ERER ++R RD R ++ RY+ ++ P
Sbjct: 230 ERERYRKRHRSRSKDRSRDRSHRPDDPIDDREIERRRRYEEAEGEDNPRYRPYEQTASPT 289
Query: 214 A---------DPERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKG 263
A + E + R+VF Q+ + +R++ +FF +AGKVRD R+I DR SRRSKG
Sbjct: 290 ARRSSSPHLTEEEHEMRSVFVSQLSARVGDRELSQFFEQQAGKVRDARVITDRISRRSKG 349
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK------NLVQSNTSAGGTATGPY 317
VGY+EF ++ SV A+AL+G LLG PVMV+ +EAEK N +N +AG P
Sbjct: 350 VGYVEFRELDSVQKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNNVAAGLVTVAPP 409
Query: 318 GAIDR-------------------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
+ R +LYVG+L+FN+T+ LR++F+PFG +E V L D
Sbjct: 410 PPVQRSYVAPKPRGPGPNDPNSYARLYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQI 469
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 418
TG+ KG+ FVQF + AK A +NG ++ GR L+V + Q AA
Sbjct: 470 TGKSKGYAFVQFKNMHDAKNAMEKMNG-FQLAGRALRVE-----IKAQPPAA-------- 515
Query: 419 DGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVN---------GSAVNQQA---- 465
LNA + ++ I T G+ + + + GS +NQ +
Sbjct: 516 -----LLNATAPGVI-----NPVIVTPTGGNFAMTNSNSFEERLEEPVGSGMNQISRVEL 565
Query: 466 -ISLPVVGQPA-VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
L QP VPV + P IP S +LLKNMF+P ET+ +D+E++
Sbjct: 566 MHKLARTEQPTNVPVTDMFRPNIPTAT-------SRSVLLKNMFNPEEETERGWDMELRD 618
Query: 524 DVEEEC-SKYGRVKHIYVDKRS 544
DV+ EC KYG V I ++ S
Sbjct: 619 DVKGECEEKYGPVLAIAIETES 640
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 216 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 275
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+
Sbjct: 276 -GPV-----RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDS 329
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTD 401
E A+ A LNG E+ GR +++ VT+
Sbjct: 330 ECARRALEQLNG-FELAGRPMRIGHVTE 356
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 182/324 (56%), Gaps = 32/324 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 156 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 215
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G
Sbjct: 216 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG 275
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQL 373
GP +LYVG+LH N+TE LR + EPFG ++ + L D ETG+ KG+GF+ F+
Sbjct: 276 -GPV-----RLYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDS 329
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL 432
E A+ A LNG E+ GR +++ VT+ G D D + D G +A
Sbjct: 330 ECARRALEQLNG-FELAGRPMRIGHVTERPDGGTDITFPDGDQELDLG-----SAAGHLQ 383
Query: 433 LMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPV----PAVTAPVIP 487
LM KL + +GI + A A A QA +L + G AVP+ PA + P
Sbjct: 384 LMAKLAEGSGIQLP---TTTAAAAAVAQAAAAQAAALQLNG--AVPLGALNPAALTALSP 438
Query: 488 --NMAAEFIGSPSECLLLKNMFDP 509
N+A++ + S+C L ++F P
Sbjct: 439 ALNLASQAVA--SQCFQLSSLFTP 460
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/301 (41%), Positives = 180/301 (59%), Gaps = 29/301 (9%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 129 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 188
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
+AI L+GQ LLG P++V+ S+AEKN + +N G ++GP +LYVG+LHFN+
Sbjct: 189 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG--SSGPM-----RLYVGSLHFNI 241
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE LR +FEPFG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR
Sbjct: 242 TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRP 300
Query: 394 LKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLG 451
++V VT+ + G D + + D G +A R LM KL + +GI +
Sbjct: 301 MRVGHVTERLDGGTDITFPDGEQELDLG-----SAGGRLQLMAKLAEGSGIQLPTTAAAA 355
Query: 452 VAPAVNGSAVNQQAISLPVVG-QPAVPVPAVTA--PVIPNMAAEFIGSPSECLLLKNMFD 508
A A +A+ ++P+ G PA A+TA P + N+A++ I S+C L ++F
Sbjct: 356 AAAAQAAAALQLNG-TVPLGGLNPA----ALTALSPAL-NLASQAIA--SQCFQLSSLFT 407
Query: 509 P 509
P
Sbjct: 408 P 408
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 199/421 (47%), Gaps = 75/421 (17%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + R++ EFF KAG V + +++ DR S RSKGVGY+EF SV
Sbjct: 171 ERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEESVA 230
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKLYVGNLHFNMTE 335
A+ L+GQ LLG PV+V+P+EAEKN S G T P+ +LYVGN+HF++TE
Sbjct: 231 AALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVPF----HRLYVGNIHFSITE 286
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
L+ +FEPFG +E VQL D ++G+ +G+GFVQF A+ A +NG ++ GR ++
Sbjct: 287 QDLQNVFEPFGELEFVQLQKD-DSGRSRGYGFVQFRDATQAREALEKMNG-FDLAGRPIR 344
Query: 396 VSSVTDHVGTQDTA---------------------------------------------- 409
V D + TA
Sbjct: 345 VGLGNDKFTPESTANLLRGFQGPNGQQQYQGSAFSGSGGRGAAGQPSNFDRAGGRDNDKG 404
Query: 410 AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLP 469
+ ++ DD D G+ N SR LM+KL RT ++ ++ I P
Sbjct: 405 SGASALDDTDVAGVNFNNFSRDALMRKLARTDEPSTTQ--------------PERQILKP 450
Query: 470 VVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC 529
+P+ V A+F + F E D+ E++ DV +E
Sbjct: 451 RTEVKPLPINNVN-------QAKFGQGNTYDSSTDQFFCFYREEGDDWVKELEEDVRQEA 503
Query: 530 -SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
KYG V HI +D S G +YL+F+ + +A + ++ R+F R+I+A + Y +
Sbjct: 504 EEKYGHVVHISLDPNSQGDIYLKFDRVQGGENAIKGLNGRYFGGRMITAAPVVDAFYSSL 563
Query: 589 F 589
F
Sbjct: 564 F 564
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 216/437 (49%), Gaps = 69/437 (15%)
Query: 196 EMRESRRYKEKKEVVEPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIM 254
E R SRR E PE + +RD+RT+F Q+ +A R + FF + G V + +++
Sbjct: 152 ERRNSRRNNTPPE---PEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVK 208
Query: 255 DRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTAT 314
DR + RSKGVGY+EF D SVP A+ L+GQ L G P++ + +EAEKN + G
Sbjct: 209 DRVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPG 268
Query: 315 GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQL 373
R LYVGN+HF++TE L+++FEPFG +E V L D + G+ KG+GFVQF
Sbjct: 269 ANGAPFHR-LYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDP 327
Query: 374 EHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTA---------AKSAD---------- 414
HAK A + +NG E+ GR ++V D + TA A+S
Sbjct: 328 SHAKNALAEMNG-FELAGRQIRVGLGNDKFTPESTANLLRTFSQQAQSYQGSAFSGAGGR 386
Query: 415 ----------FD-----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAV 456
FD DD G G AL+ A + + DR+ + ++A P
Sbjct: 387 GAYAGGSGGVFDRTHSKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARRDNPEPTK 446
Query: 457 NGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAME---T 513
G+ PVV +P VPV V P+ S+C+ ++N FDP E
Sbjct: 447 QGAQ--------PVVSKPRVPV--VDKPMA-----------SKCIKIENAFDPDEEQRNW 485
Query: 514 DPDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFAR 572
++ +++ +V+ EC KYG+V HI VD S G ++++F+S A + ++ R F
Sbjct: 486 GDNWVKDLELEVKSECDKKYGKVVHIAVDTNSEGDIFVKFDSVSGGEKALQGLNGRNFNH 545
Query: 573 RLISAIFMKPEDYEAKF 589
R I A ++ + Y + +
Sbjct: 546 RTIRASYVVDKIYNSLW 562
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 187/321 (58%), Gaps = 30/321 (9%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKA--TERDVYEFFSKAGKVRDVRLI 253
+S ++EK V EP PE RD RTVF Q L A RD+ +FFS GKVRDVR+I
Sbjct: 126 KSPHFREKSPVREPIDNLSPEERDARTVFCMQ--LAARIRPRDLEDFFSAVGKVRDVRII 183
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---LVQSNTSAG 310
DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN + +N G
Sbjct: 184 SDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKG 243
Query: 311 GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
++GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ F
Sbjct: 244 --SSGPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITF 296
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQS 429
+ E A+ A LNG E+ GR ++V VT+ + G D + + D G +A
Sbjct: 297 SDSECARRALEQLNG-FELAGRPMRVGHVTERLDGGTDITFPDGEQELDLG-----SAGG 350
Query: 430 RALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPN 488
R LM KL + +GI + A A +A+ ++P+ G + A++ + N
Sbjct: 351 RLQLMAKLAEGSGIQLPTTAAAAAAAAQAAAALQLNG-TVPLGGLNPAALTALSPAL--N 407
Query: 489 MAAEFIGSPSECLLLKNMFDP 509
+A++ I S+C L ++F P
Sbjct: 408 LASQAIA--SQCFQLSSLFTP 426
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 36/192 (18%)
Query: 423 LALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP-VPAV 481
++LNA+SRA+LMQKLDR+GIATS GS+ P N S +SLP P VP + ++
Sbjct: 19 ISLNARSRAILMQKLDRSGIATS--GSVAPVPLANPS------LSLP---GPTVPGMSSL 67
Query: 482 TAPVIPNMAA------------------------EFIGSPSECLLLKNMFDPAMETDPDF 517
AP++P++ + IG P++CLLLKNMFDP ET+PDF
Sbjct: 68 VAPLVPSLGPTTMSGYMGLHGSAVAAPAVAAPVMDPIGVPNDCLLLKNMFDPNNETEPDF 127
Query: 518 DLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
DL+I+ DV++ECSK+G V+HI+VDK SAG VYLRF+S +A AQRA+H RWFA ++I+A
Sbjct: 128 DLDIKEDVQDECSKFGAVRHIFVDKHSAGHVYLRFDSATSAIGAQRALHGRWFAGKMITA 187
Query: 578 IFMKPEDYEAKF 589
FM YEAKF
Sbjct: 188 TFMPSYTYEAKF 199
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 208/435 (47%), Gaps = 103/435 (23%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIE 268
PE D + ++R+VF Q+ + +RD+ EFF G V+DVR++MDR + RSKGVGY+E
Sbjct: 239 PEID-DYEERSVFCSQLSARLGQRDLGEFFEDHLGEGAVQDVRIVMDRVTHRSKGVGYVE 297
Query: 269 FYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG------GTATGPYGA--- 319
F VP AI L+G+++ G P++V+ ++A ++ + G G A P A
Sbjct: 298 FAARELVPKAIELTGKIVFGIPIVVQRTDAARSNGGAPRGPGDVSNHPGMAPHPAVAATQ 357
Query: 320 IDRKLYV------------GNLHF--------------NMTETQLR-------------- 339
+D ++ +H NM T+ R
Sbjct: 358 LDARVLANAPLPMQYHMAGAPIHLEAALRPPRALRPGPNMPNTEARLYVGSLHFSLTDEA 417
Query: 340 --KLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
+FEPFG +E V L + ETG+ KGF F+QF + E AK A +NG + R ++V
Sbjct: 418 VKTVFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALEQMNG-FVLADRAIRVG 476
Query: 398 SVT---DHVGTQDTAAKSADFDD-----------DDGGGLALNAQSRALLMQKLDRTGIA 443
+V G+ T + DF DDGGG LN + RA LM+KL R
Sbjct: 477 NVNAKGSGGGSSHTNGSAQDFQGGGHLPQLTSSFDDGGGAGLNPERRAALMEKLARHNEP 536
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
+ PA + + Q +PA IP S S LLL
Sbjct: 537 S---------PAASEATTTVQE-------RPA---------GIPE-------STSTSLLL 564
Query: 504 KNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQ 562
KNMFDPA ET+P++D ++ DV+EEC +KYG V I+V+K SAG +Y+ F + +A+ A
Sbjct: 565 KNMFDPAEETEPNWDTDLAEDVKEECQAKYGPVTSIHVEKDSAGEIYVTFANLDASRKAL 624
Query: 563 RAMHMRWFARRLISA 577
++ R+F + ISA
Sbjct: 625 DGLNGRFFGGKPISA 639
>gi|392574247|gb|EIW67384.1| hypothetical protein TREMEDRAFT_33681 [Tremella mesenterica DSM
1558]
Length = 619
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 239/538 (44%), Gaps = 124/538 (23%)
Query: 131 EKERERERDGERR---SSSRSRRSSSQSRRSS---------------SRSRRE------- 165
+ER R +G R S R RR S + R SR RE
Sbjct: 109 HRERYRNGNGHSRGPESEGRDRRESREIRDDRYRSRDRSRESYRSHRSRDLREMTREEKE 168
Query: 166 -------RERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEP------ 212
RE E+ L+ ER +RE R RERD R RR E+ P
Sbjct: 169 AEREKRDREMAEEKREAARLKEERFAQRERRTRERDFSPRR-RRPSPTYEIPRPRDSPPP 227
Query: 213 --EADP--------ERDQRTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSR 259
E DP + + R+VF Q+ + T D+ FF G VRD R++ DR S+
Sbjct: 228 TKEKDPVSELLEEVDSEARSVFVSQISSRMTSSDLGLFFEDKLGRGAVRDARVVTDRGSK 287
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN---------LVQSNTS-- 308
RSKG+GY+E V V A+ALSG +++G P+ V +E+E+N + + + S
Sbjct: 288 RSKGIGYVELDAVALVNRALALSGTIVMGMPIQVTLTESERNREGMDLAATIAKLSASKA 347
Query: 309 -------------AGGTATGPYGAID---------RKLYVGNLHFNMTETQLRKLFEPFG 346
+ G P +D +L+V L +++ ++++F+PFG
Sbjct: 348 RPQVTYQTRFPPLSNGLYIPPGVDVDANRDASVPYHRLFVSGLAYSLAADDIKQVFDPFG 407
Query: 347 PVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 406
++ V L D+ TGQ KG +VQF L+ A+ A A+NG EI GR ++V ++ +
Sbjct: 408 QIDFVDLHHDV-TGQSKGTAYVQFHDLKSAQTALDAMNG-FEIAGRPIRVQTIQERAHIS 465
Query: 407 DTAAKSADFDDDDGG---GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQ 463
+T +D G G ++ +R LMQKL R GS +P + S
Sbjct: 466 ETL--------EDAGYSQGRKMDNSTRMSLMQKLAR----NDGPGSAHNSP-LQFSCHKM 512
Query: 464 QAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQG 523
I P P P +L+ NMF+P ET+ ++DL++
Sbjct: 513 HIIDNSTNNAPVAPTP--------------------FILVNNMFNPEEETERNWDLDLAE 552
Query: 524 DVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
DV+ E SKYGRVK I VDK SAG VY+ FE T A+ A + +H R+F R + A ++
Sbjct: 553 DVKGEIESKYGRVKRIKVDKMSAGDVYVEFEGTGASERAVKGLHGRFFGGRSLRAGYI 610
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+ PE ERD RTVF Q+ + RD+ EFFS GKVRDVRLIMD +RRSKG+ Y+EF
Sbjct: 35 ITPE---ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 91
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID-RKLYVGN 328
DV SVP+A+ L+GQ L G P++V+P++AE+N + +++ ++T G I +LYVG+
Sbjct: 92 QDVESVPLAMGLNGQKLFGIPIVVQPTQAERNRAAAQSASTSSSTLQRGNIGPMRLYVGS 151
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
LHFN+TE L+ +FEPFG ++ ++L D+ET + KG+GF+ F E AK A LNG E
Sbjct: 152 LHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNG-FE 210
Query: 389 IVGRTLKVSSVTD 401
+ GR +KV VT+
Sbjct: 211 LAGRPMKVGHVTE 223
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 181/346 (52%), Gaps = 43/346 (12%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MD ++RSKG+ Y+EF +V S +A+ L+G LLG P+ ++ S AEKN V + S +
Sbjct: 1 MDNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 314 T---GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GP KLY+G+LH+N+TE L+ +FEPFG +E ++L D T + +G+GFV +
Sbjct: 61 QQNRGP-----MKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTY 115
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
+ AK A LNG E+ GR +KV+ VT+ ++ + D D+ D G+ L R
Sbjct: 116 VNSDDAKKALDQLNG-FELAGRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGR 172
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI---- 486
LM KL G + + A++ +GQ P++
Sbjct: 173 LALMAKLAEG----------------TGLEIPKAALAQLHIGQ--------NNPILGSAG 208
Query: 487 PNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS 544
++ I P ++C +L NMFDP + T F+ EI+ DV EEC+K G HI+VD+ S
Sbjct: 209 SVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTS 267
Query: 545 A-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
A G VY++ S A +H R+F+ RLI+A ++ +Y F
Sbjct: 268 AQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQLF 313
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 207/448 (46%), Gaps = 102/448 (22%)
Query: 211 EPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
EPE + +RD+RT+F Q+ +A R + FF G V + +++ DR + RSKGVGY+EF
Sbjct: 169 EPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEF 228
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
+ SVP A+ L+GQ L G P++ + +EAEKN + G R LYVGN+
Sbjct: 229 KEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR-LYVGNI 287
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
HF++TE L+++FEP+G +E V L D + G+ KG+GFVQF HAK A + +NG E
Sbjct: 288 HFSVTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAEMNG-FE 346
Query: 389 IVGRTLKVSSVTDHVGTQDTA--------------------------------------- 409
+ GR ++V D + TA
Sbjct: 347 LAGRQIRVGLGNDKFTPESTANLLRTFTQQAQSYQGSAFSGAGGRGAYAGGSGGIFDRTH 406
Query: 410 -------AKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVN 462
+ ++ DD D G+ R+ LM L R +G V
Sbjct: 407 SKDDRGVSGASALDDTDVAGVNFKTYDRSKLMDALARR----------------DGPEVA 450
Query: 463 QQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDP----------AME 512
+ + PVV +P V PV+ MA S+C+ ++N FD A++
Sbjct: 451 KHG-AQPVVSKPRV-------PVVDRMA-------SKCIKIENAFDADQYFARSFRTALQ 495
Query: 513 TD----------PDFDLEIQGDVEEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASA 561
D P++ ++ +V+ EC KYGRV HI VD + G +Y++F+S A
Sbjct: 496 ADDSSREQAAFGPNWIKGLETEVKAECDKKYGRVVHIAVDPNTDGDIYVKFDSVTGGEKA 555
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ ++ R F R+I A ++ + Y + +
Sbjct: 556 LQGLNGRNFNHRVIRASYVVDKIYNSLW 583
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 181/346 (52%), Gaps = 43/346 (12%)
Query: 254 MDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA 313
MD ++RSKG+ Y+EF +V S +A+ L+G LLG P+ ++ S AEKN V + S +
Sbjct: 1 MDNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPS 60
Query: 314 T---GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GP KLY+G+LH+N+TE L+ +FEPFG +E ++L D T + +G+GFV +
Sbjct: 61 QQNKGP-----MKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTY 115
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
+ AK A LNG E+ GR +KV+ VT+ ++ + D D+ D G+ L R
Sbjct: 116 VNSDDAKKALDQLNG-FELAGRPMKVNHVTER--SEYACLSALDNDEADRSGVDLGTTGR 172
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVI---- 486
LM KL G + + A++ +GQ P++
Sbjct: 173 LALMAKLAEG----------------TGLEIPKAALAQLHIGQ--------NNPILGSAG 208
Query: 487 PNMAAEFIGSP--SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS 544
++ I P ++C +L NMFDP + T F+ EI+ DV EEC+K G HI+VD+ S
Sbjct: 209 SVSSSSAIAPPVCTQCFMLSNMFDPHVATHSVFE-EIRDDVIEECTKAGGCLHIFVDRTS 267
Query: 545 A-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
A G VY++ S A +H R+F+ RLI+A ++ +Y F
Sbjct: 268 AQGNVYVKCPSIAVATQCVNMLHGRYFSGRLITAAYVPLINYHQLF 313
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/405 (33%), Positives = 193/405 (47%), Gaps = 101/405 (24%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
RD TV + LKA ERD+YEFFS+ AGKVRD++ I D+ S +SKGV Y+EFY SV
Sbjct: 315 RDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVI 374
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPY--GAIDRKLYVGNLH---F 331
A++++G +L +P+ V+ S+AEKN +A T P I KLY+G L
Sbjct: 375 KALSVNGYMLKNRPIKVQSSQAEKN-----RAAKATKHHPIDPNDIPLKLYIGGLLGPLS 429
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
N+TE +L++LF PFG + V++ D TG+ KGFGF+QF + A A + +NG +E+ G
Sbjct: 430 NITEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNG-MEVAG 488
Query: 392 RTLKVSSVTDH------------------------VGTQDTAAKSADFDDD-------DG 420
R +KVS D G Q + K + D++ DG
Sbjct: 489 REIKVSYAQDSKYLLASDALKDLNIPNLNQIKAATQGGQKSTNKEEEQDNEKIDNDDDDG 548
Query: 421 GGLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVP 479
GGL A S+ LMQKL R T I SI + A N A N SL V P
Sbjct: 549 GGLITGASSKIALMQKLQRDTIIDASIPNTY--ATGTNAMARN----SLNNVSNP----- 597
Query: 480 AVTAPVIPNMAAEFIGSPSECLLLKNMFDP---AMETDPDFDLEIQGDVEEECSKYGRVK 536
+ PN ++L NMF P ++ +DPDF +I DV EECSKYG +
Sbjct: 598 --LNNITPN------------IVLCNMFSPNDSSIGSDPDFFSDIIEDVREECSKYGNII 643
Query: 537 HIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMK 581
I+++ ++ + I++K
Sbjct: 644 KIWLN-----------------------------SKNIDGKIYIK 659
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 155/256 (60%), Gaps = 12/256 (4%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
R R+ L + Y + E+ PE ERD RTVF +Q+ + +RD+ +FF+ GK+R
Sbjct: 51 RNRKLSLSILAVELYSCRPEL-TPE---ERDARTVFVWQLSARIRQRDLEDFFTSVGKIR 106
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 308
DVRLIMD ++RSKG+ Y+EF +V S +A+ L+G LLG P+ ++ S AEKN + + S
Sbjct: 107 DVRLIMDNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPS 166
Query: 309 AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 368
G + KLY+G+LH+N+TE L+ +FEPFG ++ ++L D TG+ +G+GFV
Sbjct: 167 VPKPTQQNRGPM--KLYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFV 224
Query: 369 QFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSA-DFDDDDGGGLALNA 427
+A + AK A LNG E+ GR +KV+ VT+ + AA SA D DD D G+ L
Sbjct: 225 TYANSDDAKKALDQLNG-FELAGRPMKVNHVTER---GEYAALSALDNDDADRAGVDLGT 280
Query: 428 QSRALLMQKL-DRTGI 442
R LM KL + TG+
Sbjct: 281 TGRLALMAKLAEGTGL 296
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 162/297 (54%), Gaps = 40/297 (13%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
RS+R R +E +++E+ R+ + + + R+ M+ S+R K
Sbjct: 178 RSKRSRSKERNKDKEISPVRD-DPDADTRDARTVFVMQLSQRAK---------------- 220
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM-SVPMAI 279
ER++ EFFS GKVR V++I DRNSRRSKGVGY+E YDV SVP+A+
Sbjct: 221 -------------ERELKEFFSSVGKVRTVKIITDRNSRRSKGVGYVE-YDVADSVPLAL 266
Query: 280 ALSGQLLLGQPVMVKPSEAEKN-LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
L+ Q LLG P++V+PS AEKN N + +GP +LYVG+LH+N+TE L
Sbjct: 267 GLNNQKLLGVPIIVQPSHAEKNRSAGQNVTLQKVNSGPM-----RLYVGSLHYNITEAML 321
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSS 398
R +FEPFG ++ +QL +D + + KG+GF+ F E AK A LNG E+ GR +KV+
Sbjct: 322 RGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQLNG-FELAGRPMKVNH 380
Query: 399 VTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAP 454
VT+ A D ++ D G+ LN R LM KL + TG A + + P
Sbjct: 381 VTERNEQGQQAPSFLDSEELDKRGITLNTTGRLQLMAKLAEGTGFQIPAAAAEALHP 437
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
+ C +L NMFDP ET ++ +I+ DV EEC+K+G V HI+VDK S G VY++ + +
Sbjct: 556 TACFMLSNMFDPQAETMLGWETDIRDDVIEECNKHGGVLHIHVDKASPQGNVYVKCPTAQ 615
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
A +A +H RWFA ++I+A +M +Y A F
Sbjct: 616 IAMAALNNLHNRWFAGKMITAAYMPVANYHAIF 648
>gi|114652071|ref|XP_522797.2| PREDICTED: probable RNA-binding protein 23 isoform 12 [Pan
troglodytes]
Length = 408
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 137/232 (59%), Gaps = 35/232 (15%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 128 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 187
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG+LHFN+T
Sbjct: 188 LAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNIT 241
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E LR +FEPFG ++ + L D +TG KG+GF+ F+ E A+ A LNG E+ GR +
Sbjct: 242 EDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQLNG-FELAGRPM 300
Query: 395 KVSSVTDHV--GTQDT-------------------AAKSADFDDDDGGGLAL 425
+V VT+ + GT T AK A +G G+ L
Sbjct: 301 RVGHVTERLDGGTDITFPDGDQELDLGSAGGRFQLIAKLA-----EGAGIQL 347
>gi|403264879|ref|XP_003924694.1| PREDICTED: probable RNA-binding protein 23 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 139/240 (57%), Gaps = 25/240 (10%)
Query: 164 RERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP--E 213
+ R R +R R R+ RE R R R + RY +EK V EP
Sbjct: 97 QHRHRSRSWDRRHSESRSRDHRREDRVRYRSPPLPTGHRYGHSKSPHFREKSPVREPIDN 156
Query: 214 ADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++
Sbjct: 157 LSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEI 216
Query: 273 MSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
SVP+AI L+GQ LLG P++V+ S+AEKN +N GT GP +LYVG+LH
Sbjct: 217 QSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGTG-GPM-----RLYVGSLH 270
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
FN+TE LR +FEPFG ++ + L D +TG+ KG+GF+ L+ + N +L IV
Sbjct: 271 FNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITVNNLD------TYTNSRLGIV 324
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 199/409 (48%), Gaps = 41/409 (10%)
Query: 211 EPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
EPE + +RD+RT+F Q+ +A + FF + G V + +++ DR + RSKGVGY+EF
Sbjct: 166 EPEVTEDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKDRVTLRSKGVGYVEF 225
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
D SV A+ L+GQ L G P++ + +EAEKN + G R LYVGN+
Sbjct: 226 KDEESVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHR-LYVGNI 284
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
HF++TE LR +FEPFG +E V L D G+ KG+GFVQF HAK A + +NG E
Sbjct: 285 HFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMNG-FE 343
Query: 389 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRAL------------LMQK 436
+ GR ++V D + TA F A + Q A
Sbjct: 344 LAGRQIRVGLGNDKFTPESTANLLRTFSQQ-----AQSYQGSAFSGAGGRGAYAGGSGGN 398
Query: 437 LDRT------GIATSIAGSLGVAPAVNGSAVNQQAISLPVV----GQPAVPVPAVTAPVI 486
DRT G++ + A VN ++ + + G+PA PVI
Sbjct: 399 FDRTHAKDDRGVSGASALDDTDVAGVNYKTYDRSKLMDALARRDNGEPA----RGAQPVI 454
Query: 487 PNMAAEFIGSP--SECLLLKNMFDPAME---TDPDFDLEIQGDVEEEC-SKYGRVKHIYV 540
A + P S+C+ ++N FD E ++ E++ +V+ EC KYG+V HI V
Sbjct: 455 NKPRAPIVDKPMASKCVKIENAFDADEEQRMIGNNWVKELEVEVKAECEKKYGKVVHIAV 514
Query: 541 DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
D S G ++++F+S A + ++ R F R I A ++ + Y + +
Sbjct: 515 DTNSDGEIFVKFDSVTGGEKALQGLNGRSFNNRRIRASYVVDKIYNSLW 563
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 197/415 (47%), Gaps = 72/415 (17%)
Query: 185 ERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA 244
E ERDQRT+ Q+ RD+ EFFS
Sbjct: 161 ELTAE---------------------------ERDQRTLLIMQIARDTRPRDLEEFFSAV 193
Query: 245 GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQ 304
G VRDVR+I D + RSKG+ Y+EF+D SVP+ +AL+GQ L+G P+ ++ + AE+N
Sbjct: 194 GAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAA 253
Query: 305 SNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQ 361
+++ A G A G G + V NLH + E +R +FE FG +E + L +D +
Sbjct: 254 NSSVASTLGFVAPGNKGPT--HVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRE 310
Query: 362 CKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS----SVTDHVGTQDTAAKSADFDD 417
+GF + F + A+ + LN E+ GR +++S S V ++ + DD
Sbjct: 311 NRGFATITFRNADDAQKSCEQLN-NFELAGRCIRLSIKQESQAPAVKKEEASIHQRSLDD 369
Query: 418 -DDGGGLALNAQSRALLMQKLDR-TGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPA 475
D G +L A R LM KL + TG + S +A G +
Sbjct: 370 VGDRQGFSLGAGGRQQLMAKLAQGTGSGMELTASAQMAAQHAGHS--------------- 414
Query: 476 VPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRV 535
IP++A ++C LL NMFDP+ ET+P +D +I+ DV E+C +G
Sbjct: 415 ---------QIPSIA-------TQCFLLSNMFDPSKETEPAWDHDIREDVIEQCLAHGGA 458
Query: 536 KHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
H++VDK S G VY++ S A A A+H RWF+ ++I+A ++ Y F
Sbjct: 459 LHVFVDKGSEQGNVYVKCPSIVIAHQAVSALHGRWFSGKVITANYVPVNSYHDLF 513
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
RD RTVF + +K E+ + +F +AG V+ ++LI DR S RSKG+GYIE
Sbjct: 106 RDIRTVFVSDLQVKVDEKWLRHYFEQAGTVKSIKLIRDRYSNRSKGMGYIEMATQEDAAK 165
Query: 278 AIALSGQLLL---------GQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGN 328
A+ L+GQ + G P+ VK SEAEKN A P + V N
Sbjct: 166 ALMLNGQKMCTKHKACNCSGFPMKVKRSEAEKNWSAMKERA------PPKIQPSTIRVCN 219
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
LH +T L +LFE FG V+ V + LD E Q KG ++F + E A A + ++G++
Sbjct: 220 LHPQLTRPNLIELFEAFGDVDNVTMDLD-EHKQFKGSANIKFRRPESASRAATRMDGQV- 277
Query: 389 IVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAG 448
R L V + + ++ ++D + + L+ R+L+M+ + ++
Sbjct: 278 YFDRKLSVQLLQ-------RSGRNWKYEDREDN-IILDPSRRSLMMRHIAENKNDPTLLD 329
Query: 449 SLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFD 508
++ + VN + GQ A P A P I G+ S CL+L NMF+
Sbjct: 330 TM--------NQVNNR-------GQIANPAGAAK-PTIE-------GNASNCLVLHNMFN 366
Query: 509 PAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMR 568
A+E P +D++IQ DV EC KYG + H +VDK S+G VYL F++ + +A M+ R
Sbjct: 367 SAIEQGPHWDIDIQEDVRTECQKYGAILHCFVDKNSSGDVYLMFDNMNSCQNAANDMNGR 426
Query: 569 WFARRLISAIFMKPEDYEAKF 589
W+ R++ +M +Y +F
Sbjct: 427 WYDGRVVQVSYMPSGEYVNRF 447
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 145/268 (54%), Gaps = 29/268 (10%)
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+LHF++TE LR +FEPFG ++ +QL +D ET + KG+GF+ + E AK A
Sbjct: 30 RLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQ 89
Query: 383 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGI 442
LNG E+ GR +KV +VT+ + D S D D+ D G+ L A R LM KL
Sbjct: 90 LNG-FELAGRPMKVGNVTERL---DMNTTSLDTDEMDRTGIDLGATGRLQLMFKL----- 140
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 502
A G+A + P Q P++ ++C +
Sbjct: 141 ----AEGAGLAVPQAAANALLATAPQPAPVQQQQATPSIA---------------TQCFI 181
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASA 561
L NMFDP ET+P +D+EI+ DV EEC+K+G V HI+VD S G VY++ ST A A
Sbjct: 182 LSNMFDPRTETNPTWDVEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLA 241
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKF 589
A+H RWFA R+I+A ++ +Y + F
Sbjct: 242 VNALHGRWFAGRVITAAYVPVVNYHSMF 269
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 202/425 (47%), Gaps = 66/425 (15%)
Query: 208 EVVEPEA-DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY 266
+ V PE + +RD+RT+F Q+ +A + FF G V + +++ DR + RSKGVGY
Sbjct: 136 KTVSPEVTEDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGVGY 195
Query: 267 IEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYV 326
+EF D SV A+ L+GQ L G P++ + +EAEKN + G R LYV
Sbjct: 196 VEFKDEESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHR-LYV 254
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLD-IETGQCKGFGFVQFAQLEHAKAAQSALNG 385
GN+HF++TE L +F PFG +E V L D + KG+GFVQF AK A + +NG
Sbjct: 255 GNIHFSVTEQDLHTIFAPFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMNG 314
Query: 386 KLEIVGRTLKVSSVTDHVGTQDTAAKSADFD----------------------------- 416
E+ GR ++V D + TA+ F+
Sbjct: 315 -FELAGRQIRVGLGNDKFTPESTASLLRTFNQQAQSYQGSAFSGAGGRGAYAGGTGGVFD 373
Query: 417 -----DDDG--GGLALNAQSRA-LLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL 468
DD G G AL+ A + + DR+ + ++A G A I+
Sbjct: 374 RTHSKDDRGVSGASALDDSDVAGVNFKTYDRSKLMNALARRDGPEAAAQ--------IAR 425
Query: 469 PVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD---PDFDLEIQGDV 525
PVV +P P+ V P+ S+C+ ++N FD E P + +++G+V
Sbjct: 426 PVVSKPRDPI--VDKPM-----------ASKCIKIENAFDADQELQQFGPSWVKDLEGEV 472
Query: 526 EEECS-KYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 584
+ EC KYG+V HI V+ S G VY++F+S A R ++ R F R+I A ++ +
Sbjct: 473 KLECDKKYGKVVHIAVEPNSEGDVYVKFDSVTGGEKALRGLNGRNFNHRVIRASYVVDKI 532
Query: 585 YEAKF 589
Y + +
Sbjct: 533 YNSLW 537
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 131/223 (58%), Gaps = 20/223 (8%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 96 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 154
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF
Sbjct: 155 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 214
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 215 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVG 268
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+
Sbjct: 269 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|58267808|ref|XP_571060.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112313|ref|XP_775132.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257784|gb|EAL20485.1| hypothetical protein CNBE4060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227294|gb|AAW43753.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 205/413 (49%), Gaps = 83/413 (20%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
R++F Q+ + T + + FF G VRD R++ D+ +RRSKG+GY+E V V
Sbjct: 242 RSIFVSQLSARMTSQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLVNK 301
Query: 278 AIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAGGT-------------------- 312
A+ALSG +++G P+ + +EAE+N L+ + A
Sbjct: 302 ALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNYPP 361
Query: 313 -ATG---PYG---------AID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
+TG P G AI +L+V NL F++T +R++FEPFG +E V L D+
Sbjct: 362 LSTGLALPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHTDL- 420
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDD 418
+G KG +VQF ++ A+ A A+ G ++ GR +KV ++ + GT T D +D
Sbjct: 421 SGLRKGTAYVQFKDVKSAQMALDAMAG-FDLAGRLIKVQTIQER-GTYQTP----DLIED 474
Query: 419 DGG-GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP 477
G G L+A R LM KL RT +++ S AP +NGS
Sbjct: 475 SGNYGTRLDANQRQQLMFKLARTEPNVNLSLS---APKINGSQSK--------------- 516
Query: 478 VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVK 536
IP M P+ +++ NMF+P ET+ ++DL++ DV+ E SKYGRVK
Sbjct: 517 --------IPAM------DPTPRIVVHNMFNPEEETERNWDLDLAEDVKGEVESKYGRVK 562
Query: 537 HIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
I V+K SAG VY+ F T++A A + ++ R+F R + A ++ + A
Sbjct: 563 RIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQAGYITEALFNAHL 615
>gi|441667161|ref|XP_004091953.1| PREDICTED: probable RNA-binding protein 23 [Nomascus leucogenys]
Length = 319
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 118/177 (66%), Gaps = 11/177 (6%)
Query: 199 ESRRYKEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
+S ++EK V EP PE RD RTVF Q+ + RD+ +FFS GKVRDVR+I D
Sbjct: 141 KSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISD 200
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTA 313
RNSRRSKG+ Y+EF ++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G+
Sbjct: 201 RNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGSG 260
Query: 314 TGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GP +LYVG+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+
Sbjct: 261 -GPM-----RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|193785067|dbj|BAG54220.1| unnamed protein product [Homo sapiens]
Length = 319
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 130/223 (58%), Gaps = 20/223 (8%)
Query: 161 RSRRERERESERERELELERERERERELRERERDLEMRESRRY--------KEKKEVVEP 212
R R R R +R E R R+ RE R R + RY +EK V EP
Sbjct: 96 RQCRHRSRSWDRRHGSE-SRSRDHRREDRVHYRSPPLATGYRYGHSKSPHFREKSPVREP 154
Query: 213 --EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
PE RD RTVF Q+ + RD+ +FFS GKVRDV +I DRNSRRSKG+ Y+EF
Sbjct: 155 VDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVCIISDRNSRRSKGIAYVEF 214
Query: 270 YDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVG 327
++ SVP+AI L+GQ LLG P++V+ S+AEKN +N G GP +LYVG
Sbjct: 215 CEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMANDLQKGNG-GPM-----RLYVG 268
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
+LHFN+TE LR +FEPFG ++ + L D +TG+ KG+GF+
Sbjct: 269 SLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITL 311
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 179/341 (52%), Gaps = 53/341 (15%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD+RTVF Q+ + T ++ EFF +AG VRD +++ DR + RSKGV Y+EF SV
Sbjct: 213 ERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGRSKGVAYVEFRREDSVQ 272
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
+A+ LSG+ +LG PV+V+ +EAEKN L + N + +A P+ +L VGN+HF
Sbjct: 273 VALTLSGKRILGIPVIVQLTEAEKNRKARELSEQNRAL--SAELPF----HRLCVGNIHF 326
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
N+T+ L+ +FEPFG +E V+L D + + KGFGF+QF A+ A +NG ++ G
Sbjct: 327 NITDEDLKAIFEPFGELEYVRLQRD-DQNRSKGFGFIQFRDPLCARIALEKMNG-FDLAG 384
Query: 392 RTLKVSSVTDHVGTQDTAAKSADFDDD---------DGGGLALNAQSRALLMQKLDRTGI 442
R L+V TD T+ TA+ FD +++A S Q+L ++
Sbjct: 385 RQLRVGLGTDKFATETTASMLRRFDSSYSRYKHEHVSQPTPSISASSDEASHQRLVKSSD 444
Query: 443 AT---SIAGSLGVAPAVN------GSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF 493
+++ S PA++ A N+Q +S +++ P
Sbjct: 445 NLDEGNLSPSEDSRPAISRDELMKKLARNEQIVSTD---------DSLSKP--------- 486
Query: 494 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYG 533
P+ C+LL+NMF+P ET + E+ V EEC KYG
Sbjct: 487 ---PTRCVLLQNMFNPEEETGDHWMEELALHVREECEEKYG 524
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 160/299 (53%), Gaps = 22/299 (7%)
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
P+E + +N G+A GP +LYVG+LHFN+TE LR +FEPFG +E +QL
Sbjct: 137 PAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEPFGRIESIQLM 190
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSAD 414
+D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV VT+ D ++ S+
Sbjct: 191 MDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVGHVTERT---DASSASSF 246
Query: 415 FDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVV 471
D D+ G+ L R LM +L + TG L + PA + +++ V
Sbjct: 247 LDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPPAAQQALQMSGSLAFGAV 298
Query: 472 GQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSK 531
+ T AA ++C L NMF+P E + +D EI+ DV EEC+K
Sbjct: 299 ADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNK 358
Query: 532 YGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+G V HIYVDK SA G VY++ S AA +A A+H RWFA ++I+A ++ Y F
Sbjct: 359 HGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLF 417
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 15/214 (7%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ L
Sbjct: 2 QLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV- 403
FG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+ +
Sbjct: 116 FGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLD 174
Query: 404 GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
G D D + D G +A R LM KL
Sbjct: 175 GGTDITFPDGDQELDLG-----SAGGRFQLMAKL 203
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 150/269 (55%), Gaps = 20/269 (7%)
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVG+LHFN+TE LR +F+PFG ++ ++L + ETG+ +G+GF+ F E AK A
Sbjct: 2 RLYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQ 61
Query: 383 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL-DRTG 441
LNG E+ GR +KV VT+ +G + T + D DD D G+ L A R LM KL + TG
Sbjct: 62 LNG-FELAGRPMKVGHVTERLG-ETTGPSALDTDDMDRAGIDLGATGRLQLMAKLAEGTG 119
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 501
P V +A+N I P A +AA ++C
Sbjct: 120 FEI---------PQVAANALNMNGI-------PHSIQVESAAACAAAIAASAPPIATQCF 163
Query: 502 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAAS 560
+L NMFDP E +++EIQ DV EEC+K+G V HIYVDK S G VY++ S AA +
Sbjct: 164 MLSNMFDPITEATTTWEIEIQDDVIEECNKHGGVLHIYVDKASPQGNVYVKCPSISAAVA 223
Query: 561 AQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ A+H R+FA ++I+A ++ +Y + F
Sbjct: 224 SVNALHGRYFAGKVITAAYVPLPNYHSLF 252
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 15/214 (7%)
Query: 227 QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLL 286
Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP+AI L+GQ L
Sbjct: 2 QLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 61
Query: 287 LGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEP 344
LG P++V+ S+AEKN +N G GP +LYVG+LHFN+TE LR +FEP
Sbjct: 62 LGVPIIVQASQAEKNRLAAMANNLQKGNG-GPM-----RLYVGSLHFNITEDMLRGIFEP 115
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV- 403
FG ++ + L D +TG+ KG+GF+ F+ E A+ A LNG E+ GR ++V VT+ +
Sbjct: 116 FGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNG-FELAGRPMRVGHVTERLD 174
Query: 404 GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKL 437
G D D + D G +A R LM KL
Sbjct: 175 GGTDITFPDGDQELDLG-----SAGGRFQLMAKL 203
>gi|223999617|ref|XP_002289481.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974689|gb|EED93018.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 821
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 202/422 (47%), Gaps = 77/422 (18%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKA------GKVRDVRLIMDRNSRRSKGVGYIEFYD 271
+DQRT+F Q+ +KA ERD+ +F + G VRDV L+ D+ + R KG Y+E +
Sbjct: 412 KDQRTIFISQLVMKAEERDIRRYFQRKILNGHRGCVRDVILLRDKRTGRHKGCAYVELAN 471
Query: 272 VMSVPMAIALSGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTATGPY-----GAI---- 320
+ V A+ SG+ Q P++VK S ++ GGT G G +
Sbjct: 472 LSDVEKALDASGKTPDFQKFPILVKSSTLP-------STPGGTVEGAVILAVAGGMTVDG 524
Query: 321 ----DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+K+Y+GN+ +T+ QL LF FGP+E V L +D TG +GF F+ + + A
Sbjct: 525 KRVESQKVYLGNVDRMVTQAQLYALFSQFGPLEKVLLQMDPTTGASRGFAFLSYRDPKDA 584
Query: 377 KAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDD----------------- 419
A ++G+L + G+ LK T Q AA + D+
Sbjct: 585 NLAIQTMSGQL-LAGKPLK----TGWANQQSAAAGIVEVKTDEIPADANEKVEKANAALI 639
Query: 420 ---GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG-QPA 475
G GL AQ A L G A +LG+ PA +V + A+ + + G P
Sbjct: 640 QLTGTGLITVAQQGATAQALLSSGGAAA----ALGILPAQQVQSVAEAALEMALGGAAPN 695
Query: 476 V-PVPAVT------------APVIPNMAAEFIG---SPSECLLLKNMFDPAMETDPDFDL 519
V PVPAV APV+ + A +G +PS+ +L+ NMFD ET+P+++
Sbjct: 696 VQPVPAVAVAPSVSTALIAPAPVV--VDATVVGRSDNPSQHILVHNMFDKDEETEPNWEN 753
Query: 520 EIQGDVEEECSKYGRVKHIYV-DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 578
+I+ D EEEC++YG++ + V K G +Y FES+ A + + + RWF +R +
Sbjct: 754 DIKLDFEEECAQYGKMTSVVVMSKEVGGKIYASFESSRDAMNCAKNLAGRWFDKRQLRVE 813
Query: 579 FM 580
F+
Sbjct: 814 FV 815
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 196/402 (48%), Gaps = 75/402 (18%)
Query: 198 RESRRYK--EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
ESRR K+E P + ERD+RTVF Q+ + RD+ FF K G V++ +++ D
Sbjct: 324 NESRRVSRSPKREATPPLTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKD 383
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG 315
R S RSKGVGY+EF + SVP AI L+GQ LLG P++ + +EAEKN N A G +
Sbjct: 384 RVSGRSKGVGYVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAAG--SN 441
Query: 316 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
P +LY +FEPFG +E VQL + E G+ +G+GFVQF
Sbjct: 442 PNSIPFHRLY--------------NVFEPFGELEFVQLQKE-EQGRSRGYGFVQFRDPNQ 486
Query: 376 AKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 435
A+ A +NG ++ GR ++V D + TA+ L+Q
Sbjct: 487 AREALEKMNG-FDLAGRPIRVGLGNDKFTPESTAS----------------------LLQ 523
Query: 436 K-----LDRTGIATSIAGSLGVAP-AVNG-------------SAVNQQAISLPVVGQPAV 476
+ + ++ +G+ G P A NG SA A+ VG+
Sbjct: 524 RFQGQSHQQQFQGSAFSGAGGRGPQAANGSNFDRAGGRDNDKSAGGASALDDTDVGESKP 583
Query: 477 PVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRV 535
P V NMA S C++LK+MFDP + + D+ E++ +V E +KYG V
Sbjct: 584 LPPGV------NMA-------SRCVVLKHMFDPTGQDNDDWIKELEDEVRAEAEAKYGHV 630
Query: 536 KHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
HI +D S G +YL+F+ + +A + ++ R+F R I+A
Sbjct: 631 VHIAIDPNSDGDIYLKFDRVQGGENAIKGLNGRFFDGRTINA 672
>gi|219120589|ref|XP_002181030.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407746|gb|EEC47682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 687
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 203/414 (49%), Gaps = 62/414 (14%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAG-KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+DQRTVF Q+ + ERD+ +FF++ G KV +V L+ D+ + + KG Y+E + V
Sbjct: 284 KDQRTVFVTQLVQRTQERDLKKFFTRKGCKVNEVILLRDKRTGKHKGCAYVEMKRMEDVS 343
Query: 277 MAIALSGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTAT------------GPYGAI-- 320
+A+ LS ++ Q PV+VK SEAEKN + + ++A TA GP G +
Sbjct: 344 IAVGLSAEVPDFQRFPVLVKASEAEKNYLANASTATSTAAQMGVPIKSAPLLGPDGKMLE 403
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF-----AQLEH 375
+K+Y+G+L ++++ L LF FG +E V L +D TG KGF F+ F A L
Sbjct: 404 AQKVYIGSLDPSVSQEHLFALFSQFGQLEKVTLQMDSNTGLSKGFAFLTFHDPKEANLAI 463
Query: 376 AKAAQSALNGKLEIVGRTLKVSSVTD-HVGTQDTAAKSADFDDDDGGGLALNAQSRAL-L 433
A AL G+ G + SS+ V T D +F D A +RA
Sbjct: 464 QTMANQALAGRPMKTGWASQGSSIPGVEVVTSD------EFPAD--------ASTRAQRA 509
Query: 434 MQKLDRTGIATSIAGSLGVAPAVNG----SAVNQQAISLPVVGQ------------PAVP 477
Q L + + +A S+G AP + +AV A +P V + PA P
Sbjct: 510 YQVLAQLTMGVPVA-SVGQAPGTSSFAAAAAVPGGASRIPTVAEARASLAGAVAMAPATP 568
Query: 478 VPAVTAPVIPNMA---AEFIG---SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSK 531
V P + + A+ +G +P++ +L++NMFD ETDP ++ +I+ + E+ECSK
Sbjct: 569 AVLVPTPAVAPLGSPDAKIVGNADTPTKNVLIRNMFDKDKETDPGWEKDIKEEFEDECSK 628
Query: 532 YGRVKHIYV-DKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPED 584
YG + + V G +Y F+S A ++ RWF +R + F+ +D
Sbjct: 629 YGTITSVTVMHMEPGGKIYASFDSVIGAQKCASSLAGRWFDKRQLRVDFVADKD 682
>gi|145513991|ref|XP_001442906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410267|emb|CAK75509.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 290/571 (50%), Gaps = 87/571 (15%)
Query: 62 SRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERS---RERREK 118
+++ + ++ G+ +DRDR D++K++H +D +R+R+R RER+++ +R+R++S +++++
Sbjct: 20 TQQQKHDQKGNEKDRDRGHDKNKDKHYKDNNRERERERERDKDKDRERDKSAEKKKKKKD 79
Query: 119 EKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR----SRRERERESERER 174
EK+ +++ R + ++++ + + + + +Q + +S+ S +++RE ++R
Sbjct: 80 EKKDKKKRSRSASRSSKKKKSKKDKEREKDKDKDNQQQVITSQLLMTSDIQKKREIAKQR 139
Query: 175 ELEL-ERE-RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
++E+ E E RE ER++ E ER+LE + R TV Y +PLKA
Sbjct: 140 KIEIMEAEIRELERKIVEVERELE------------------EAHRQDLTVLMYCLPLKA 181
Query: 233 TERDVYEFFS--KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL--G 288
E+ +Y+FF GK+RD+R+I D+ S RS+GV Y+EFY S+PMA+AL+ +L + G
Sbjct: 182 KEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALALNDRLFIMDG 241
Query: 289 Q-----PVMVKPSEAEKN---------------------LVQSNTSAGGTATGPYGAIDR 322
Q PV ++ S+AEKN L N A TG + R
Sbjct: 242 QQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQNIQDLQNMNGPARVQITGMAEQLQR 301
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+ E +R+ F PFG +E V++P D E+G+ G +V + + E A+
Sbjct: 302 ----------INEEDIREAFVPFGTIETVEIPKD-ESGRMTGVLYVTYEKAESARNMIEV 350
Query: 383 LNGK-LEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTG 441
+N + + G+ +KV V+ D DDD L N R LM+KL
Sbjct: 351 INNQPFLLNGKPIKVQLVSGANNYMD-----LQLDDD----LVQNPVMRITLMKKL---- 397
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSE 499
+ S+ ++ + P + + Q I L ++ P + ++ P+ N A ++
Sbjct: 398 MDDSLIDNINLPPLMTQLGLTVQRI-LNIIQSPNPTLGCISGWMPLKHNPPA--CPCTTK 454
Query: 500 CLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAA 559
++L NM+ ++ +E++ +VE EC KYG V+ ++VDK++ G V + F+ EAA
Sbjct: 455 VIVLTNMWTDLEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIIVFKQWEAAK 514
Query: 560 SAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
M+ R F +++ + F+ + + K
Sbjct: 515 QVNVLMNNRKFGNKIVQSYFITESQFMSIIK 545
>gi|209878175|ref|XP_002140529.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
gi|209556135|gb|EEA06180.1| splicing factor, CC1-like family domain-containing protein
[Cryptosporidium muris RN66]
Length = 555
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 250/567 (44%), Gaps = 112/567 (19%)
Query: 36 KSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR 95
KS R YR + + EEE K++ ++E ++ ++ + + DK R R ++
Sbjct: 57 KSHRHYRDHAEVDHSSEEEDFLRRKKNYYKQNE----KKVKNYNSNDDKYTKYRFRSKES 112
Query: 96 DRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQS 155
D +E E +R E + +RD + + R+ + R+++ + SS
Sbjct: 113 DC-------SEGSYEGNRGSFEYN---HFKYKRDYKLKYYRDSKYDNRTTTYNHWDSSDI 162
Query: 156 RRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEAD 215
+ ++ ++ER + E + + EL +RDLE+
Sbjct: 163 YKGNNNGKKERYKS---------EFDASKVAELNRVKRDLEV------------------ 195
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
RD TV + L A E DVYEFF+ AG VRD+R+I D+ S RSKGV Y+EFY S
Sbjct: 196 SSRDDLTVLVLNLNLNAAEYDVYEFFAAHAGNVRDIRIIRDQRSGRSKGVCYVEFYTAES 255
Query: 275 VPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL--HFN 332
V A+ LSGQ ++ PV ++ S+AEKN + KLYVG L H +
Sbjct: 256 VIKALKLSGQSIMNSPVTIQASQAEKNRA---AKLAKLQELEAEIVPLKLYVGGLVDHLS 312
Query: 333 -MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
+TE ++ KLF FGP++ V++P D T + +GF +V F + A ALN EI G
Sbjct: 313 KLTEDEINKLFRTFGPIKSVEIPRDPHTDKHQGFAYVTFQKTIDGHEAMRALNN-YEIAG 371
Query: 392 RTLKVSSVTD-----HVGTQDTA-----AKSADFD--------DDDGGGLALNAQSRALL 433
+ + V+ D +G+ + A S D +D GGL A SR++L
Sbjct: 372 QRITVALSVDTPTNNSIGSTSSINVMSYAPSISIDLYGDTEKLEDVDGGLLSGASSRSIL 431
Query: 434 MQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEF 493
M+KL + +IP E
Sbjct: 432 MKKLQEREFGRT------------------------------------ETQLIPQ--DEI 453
Query: 494 IGSPSECLLLKNMF--DPAMETDPDFDL----EIQGDVEEECSKYGRVKHIYVD-KRSAG 546
+ + S CL+L NMF + +++ D D+ EI+ DVE EC KYG V +D K+ G
Sbjct: 454 LKTSSRCLVLGNMFTREEILDSKGDIDIITLEEIEKDVESECKKYGEVLECRIDHKKCDG 513
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARR 573
V+++++ A A +A R+F R
Sbjct: 514 KVWIKYKEAIYAKKASQAFKGRFFGGR 540
>gi|145509627|ref|XP_001440752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407980|emb|CAK73355.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 222/457 (48%), Gaps = 72/457 (15%)
Query: 165 ERERESERERELEL-ERE-RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRT 222
+++RE ++R++E+ E E RE ER++ E ER+LE + R T
Sbjct: 118 QKKREIAKQRKIEIMEAEIRELERKIVEVERELE------------------EAHRQDLT 159
Query: 223 VFAYQMPLKATERDVYEFFS--KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
V Y +PLKA E+ +Y+FF GK+RD+R+I D+ S RS+GV Y+EFY S+PMA+A
Sbjct: 160 VLMYCLPLKAKEKHIYQFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALA 219
Query: 281 LSGQLLL--GQ-----PVMVKPSEAEKN-----------------LVQSNTSAGGTATGP 316
L+ +L + GQ PV ++ S+AEKN +Q + G A
Sbjct: 220 LNDRLFIMDGQQVGTIPVKIQLSQAEKNRAARDQKNMQIKQNKLQSIQDLQNMNGPARVQ 279
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHA 376
+ +L + E +R+ F PFG ++ V++P D E G+ G +V + + E A
Sbjct: 280 ITGMAEQLQ------KINEEDIREAFVPFGTIDTVEIPKD-EQGRMTGVLYVTYEKAESA 332
Query: 377 KAAQSALNGKLEIV-GRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQ 435
+ +N + ++ G+ +KV V+ D DDD L N R LM+
Sbjct: 333 RNMIEVINNQQFLLNGKPIKVQLVSGANNYMDL-----QLDDD----LVQNPVMRITLMK 383
Query: 436 KLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAAEF 493
KL + ++ ++ + P + + Q I L ++ P + ++ P+ N A
Sbjct: 384 KL----MDDNLIDNINLPPLMTQLGLTVQRI-LNIIQSPNPSLGCISGWMPLKHNPPA-- 436
Query: 494 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFE 553
++ ++L NM+ ++ +E++ +VE EC KYG V+ ++VDK++ G V + F+
Sbjct: 437 CPCITKVIVLTNMWTELEISNQAAIVELKEEVENECKKYGDVEMVWVDKKNEGNVIVVFK 496
Query: 554 STEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFK 590
EAA M+ R F +++ + F+ + + K
Sbjct: 497 QWEAAKQVNVLMNNRKFGNKVVQSYFITESQFMSIIK 533
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 187/390 (47%), Gaps = 72/390 (18%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
+ +RD TV + M L ERD+YE FS+ AGKVRD++L+ D S RSKG+ Y+EFY
Sbjct: 319 EAQRDDLTVLVFNMSLSVDERDIYELFSEHAGKVRDIQLVRDSRSGRSKGIAYVEFYTQE 378
Query: 274 SVPMAIALSGQLLLGQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAIDRKLYVGN 328
SV A++++G L GQ + V+ S+AEKN Q +A A P + L VG
Sbjct: 379 SVIKALSMNGMSLKGQGIRVQSSQAEKNRAARAAKQLQENALKEADNPTTVMVSNL-VGV 437
Query: 329 LHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLE 388
L N++E L++LF PFG V V + + + G KG+ +V+F + A+ A + +NG +
Sbjct: 438 LS-NLSEGDLQQLFAPFGNVAEVAVARN-DLGLSKGYAYVRFKRWTEAREALNVMNG-FD 494
Query: 389 IVGRTLKVSSVTDHV-GTQDTAAKSADFD----DDDGGGLALNAQSRALLMQKLDRTGIA 443
I G+ +KVS VT + G + D D DD+ GL + ++ LM+KL
Sbjct: 495 ISGQPIKVSYVTSNKRGRGSRLNELGDLDIERLDDEEAGLISGSSNKIALMKKL------ 548
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLL 503
QQ ++ AA + L
Sbjct: 549 -------------------QQRVN----------------------AANIV--------L 559
Query: 504 KNMFDPAMETD-PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASA 561
NM+ D DF EI+ DV EEC KYG V +Y+++R G VY++F S A +A
Sbjct: 560 SNMYTSEDYADNNDFFDEIEDDVREECKKYGEVVKVYLNRRKPDGKVYVKFRSNTDAQTA 619
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
+++ R+FA I ++ + + + S
Sbjct: 620 HKSLQGRYFAGNTIQVGYLSDDQFNSLLGS 649
>gi|349804535|gb|AEQ17740.1| putative rna-binding region containing protein 2 isoform b isoform
15 [Hymenochirus curtipes]
Length = 258
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 8/139 (5%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ EFFS GKVRDVR+I DRNSRRSKG+ Y+EF DV SV
Sbjct: 7 ERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVA 66
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+AI L+GQ +LG P++V+ S+AEKN +N GTA GP +LYVG+LHFN+T
Sbjct: 67 LAIGLTGQRVLGVPIVVQASQAEKNRAAALANNLQKGTA-GPM-----RLYVGSLHFNIT 120
Query: 335 ETQLRKLFEPFGPVELVQL 353
E LR +FEPFG +E +QL
Sbjct: 121 EDMLRGIFEPFGRIESIQL 139
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLR 551
++C L NM +P E +P +D EI+ DV EEC+K+G V HIYVDK S G VY++
Sbjct: 203 TQCFQLSNM-NP-QEDEPGWDTEIKDDVIEECNKHGGVVHIYVDKSSPQGNVYVK 255
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 203/431 (47%), Gaps = 75/431 (17%)
Query: 173 ERELELERERERERELRERERDLEMRESRRYKEKKEV----VEPEADPERDQRTVFAYQM 228
ERE+E ++ + + R+ L++ E + E+ ++ + +RD TV M
Sbjct: 266 EREVEYQKSDRTDNDREPRDIGLDIMEKAKILRSNEMERRRMKDIEEAQRDDLTVLVSNM 325
Query: 229 PLKATERDVYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
L ERD+YE FS AGKVRD++ + D S RSKG+ Y+EFY SV A++++G +
Sbjct: 326 HLSVDERDIYELFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFYTQESVIKALSMTGMSMK 385
Query: 288 GQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 342
GQ + V S+AEKN Q +A + P + L +G L + + E +L +LF
Sbjct: 386 GQGIRVHSSQAEKNRAAKAQKQLQDNALKESDNPTTIVVSNL-LGVLSY-LNEIELNQLF 443
Query: 343 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 402
PFG + V L + G KG+ +++F + AK A + +NG +I G+ +KV+
Sbjct: 444 SPFGNIIDVALAR-TDDGNSKGYAYIRFKRWNEAKEALNVMNG-FDINGQQIKVAYANTR 501
Query: 403 VGTQDTAAKSADFD----DDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNG 458
++ D D DDD GL + + LM+KL
Sbjct: 502 KDSKSRLHSLGDVDMERLDDDDAGLISGSNIKIALMKKL--------------------- 540
Query: 459 SAVNQQAISLPVVGQPAVPVPAVTAPVIPNM--AAEFIGSPSECLLLKNMFDPAMETDPD 516
Q P+ + + V+ NM +A++ E + +
Sbjct: 541 --------------QQRQPLNS-SNLVLSNMYTSADY------------------EDNRE 567
Query: 517 FDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLI 575
F EI+ DV+EEC KYG V ++V+KR+ G VY++F++ + A +A +++ R+FA I
Sbjct: 568 FFDEIEEDVKEECGKYGTVIQVFVNKRNPDGKVYVKFKNNDDAQAANKSLQGRYFAGNTI 627
Query: 576 SAIFMKPEDYE 586
++ + Y+
Sbjct: 628 QVSYISDDQYQ 638
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 181/383 (47%), Gaps = 71/383 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
+RD TV M L ERD+YE FS AGKVRD++ + D S RSKG+ Y+EFY SV
Sbjct: 313 QRDDLTVLVSNMHLSVDERDIYELFSEHAGKVRDIQCVRDLRSGRSKGIAYVEFYTQESV 372
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKNLV-----QSNTSAGGTATGPYGAIDRKLYVGNLH 330
A++++G + GQ + V S+AEKN Q +A + P + L +G L
Sbjct: 373 IKALSMTGMSMKGQGIRVHSSQAEKNRAAKAAKQLQDNALKESDNPTTIVVSNL-LGVLS 431
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
+ + E +L +LF PFG + V L + G+ KG+ +++F + AK A + +NG +I
Sbjct: 432 Y-LNEIELNQLFSPFGNIIDVALAR-TDNGESKGYAYIRFKRWNEAKEALNVMNG-FDIN 488
Query: 391 GRTLKVSSVTDHVGTQDTAAKSADFD----DDDGGGLALNAQSRALLMQKLDRTGIATSI 446
G+ +KV+ + D D DDD GL + + LM+KL
Sbjct: 489 GQQIKVAYANTRKDPKSRLHSLGDLDMERLDDDDAGLISGSNVKIALMKKL--------- 539
Query: 447 AGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNM--AAEFIGSPSECLLLK 504
Q P+ + + V+ NM +A++ +
Sbjct: 540 --------------------------QQRQPLNS-SNLVLSNMYTSADYADNHE------ 566
Query: 505 NMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQR 563
FD EI+ DV+EEC KYG V ++V++R+ G VY++F++ + A SA +
Sbjct: 567 -FFD-----------EIEEDVKEECGKYGTVVQVFVNRRNPDGKVYVKFKNNDDAQSANK 614
Query: 564 AMHMRWFARRLISAIFMKPEDYE 586
++ R+FA I ++ + Y+
Sbjct: 615 SLQGRYFAGNTIQVSYISDDQYQ 637
>gi|145494510|ref|XP_001433249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400366|emb|CAK65852.1| unnamed protein product [Paramecium tetraurelia]
Length = 535
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 147/561 (26%), Positives = 279/561 (49%), Gaps = 75/561 (13%)
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEK 120
+S + + + N +DR D+++DK ++R+++R RER++ E+ +++ E+++K+K
Sbjct: 19 QSYKHDSKLNDKEKDRGHDKNKDKHNRESHKEREKERERERDKSAEKKKKKKEEKKDKKK 78
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELEL-E 179
+ ++K+ ++++D E+ + ++Q ++ ++ RE ++R++E+ E
Sbjct: 79 RSRSASKSSKKKKSKKDKDREKEKEQHQQAITTQILMTNDIQKK---REIAKQRKIEIME 135
Query: 180 RE-RERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
E RE ER++ E ER+LE + R TV Y +PLKA E+ +Y
Sbjct: 136 AEIRELERKIVEVERELE------------------EAHRQDLTVLMYCLPLKAKEKHIY 177
Query: 239 EFFS--KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL--GQ----- 289
+FF GK+RD+R+I D+ S RS+GV Y+EFY S+PMA+AL+ +L + GQ
Sbjct: 178 QFFQTFNCGKIRDIRIIRDQKSGRSRGVAYVEFYQEESIPMALALNDRLFIMDGQQVGTI 237
Query: 290 PVMVKPSEAEKN-----------------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
PV ++ S+AEKN +Q + G A + +L
Sbjct: 238 PVKIQLSQAEKNRAARDQKNMQIKQNKLQSIQDLQNMNGPARVQITGMAEQLQ------K 291
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV-G 391
+ E +R+ F PFG ++ V++P D E G+ G +V + + E A+ +N + ++ G
Sbjct: 292 INEEDIREAFVPFGTIDTVEIPKD-EQGRMTGVLYVTYEKAESARNMIEVINNQQFLLNG 350
Query: 392 RTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLG 451
+ +KV V+ D DDD L N R LM+KL + ++ ++
Sbjct: 351 KPIKVQLVSGANNYMDL-----QLDDD----LVQNPVMRITLMKKL----MDDNLIDNIN 397
Query: 452 VAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA--PVIPNMAAEFIGSPSECLLLKNMFDP 509
+ P ++ + Q I L ++ P + ++ P+ N A ++ ++L NM+
Sbjct: 398 LPPLMSQLGLTVQRI-LNIIQSPNPSLGCISGWMPLKHNPPA--CPCITKVIVLTNMWTD 454
Query: 510 AMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRW 569
++ +E++ +VE EC KYG ++ ++VDK++ G V + F+ EAA M+ R
Sbjct: 455 LEISNQAAIVELKEEVENECKKYGEIEMVWVDKKNEGNVIVVFKQWEAAKQVNVLMNNRK 514
Query: 570 FARRLISAIFMKPEDYEAKFK 590
F +++ + F+ + + K
Sbjct: 515 FGNKVVQSYFITESQFMSIIK 535
>gi|321259451|ref|XP_003194446.1| hypothetical protein CGB_E5340C [Cryptococcus gattii WM276]
gi|317460917|gb|ADV22659.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 236/520 (45%), Gaps = 121/520 (23%)
Query: 150 RSSSQSRRS-----SSRSRRERE---------RESERERELELERERERERELRERERD- 194
R SS RS S RS R+R+ RES E E +R RE + ERD
Sbjct: 137 RPSSHRDRSRESHRSYRSHRDRDEMPPIRPMNRESRDIAEERRENDRRREMHFADLERDG 196
Query: 195 ---------------------LEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKAT 233
R ++ + E D E R++F Q+ + T
Sbjct: 197 RMRSPPPRRRRLSPEYGGPRGPPPRRPPPPRDPATALIEEVDSE--ARSIFVSQLSARMT 254
Query: 234 ERDVYEFFSKA---GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQP 290
+ + FF G VRD R++ D+ +RRSKG+GY+E V V A+ALSG +++G P
Sbjct: 255 SQVLGLFFEDKLGRGAVRDARVVTDKVARRSKGIGYVELDSVDLVNKALALSGTVVMGIP 314
Query: 291 VMVKPSEAEKN-----LVQSNTSAGGT---------------------ATG---PYG--- 318
+ + +EAE+N L+ + A +TG P G
Sbjct: 315 INIMLTEAERNHSGTELITATALASNARSHGGGGGRSSVPFTQNYPPLSTGLALPLGLDP 374
Query: 319 ------AID-RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
AI +L+V NL F++T +R++FEPFG +E V L +D +G KG +VQF
Sbjct: 375 DAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMD-PSGLRKGTAYVQFK 433
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG-GLALNAQSR 430
++ A+ A A+ G ++ GR +KV ++ + GT T D +D G G L+A R
Sbjct: 434 DVKSAQMALDAMAG-FDLAGRLIKVQTIQER-GTYQT----PDLIEDSGNYGTRLDANQR 487
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
LM KL RT P+VN S +S P + VPA+
Sbjct: 488 QQLMFKLART------------EPSVNLS------LSAPKISGSQSKVPAM--------- 520
Query: 491 AEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRSAGFVY 549
P+ +++ NMF+P ET+ ++DL++ DV+ E SKYG+VK I V+K SAG VY
Sbjct: 521 -----DPTPRIVVHNMFNPEEETERNWDLDLAEDVKGEVESKYGKVKRIKVEKMSAGEVY 575
Query: 550 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ F T++A A + ++ R+F R + ++ + A
Sbjct: 576 IEFIDTDSAIKAVKGLNGRFFGGRQLQVGYITEALFNAHL 615
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 198/388 (51%), Gaps = 56/388 (14%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
+ +R+ TV + L A ER +YE FS AGKVRDV+ + D S RSKGV Y+EFY
Sbjct: 137 EAQREDLTVLVINLYLGADERKIYEVFSEHAGKVRDVQCVRDARSGRSKGVAYVEFYTQE 196
Query: 274 SVPMAIALSGQLLLGQPVMVKPSEAEKN-------LVQSNTSAGGTATGPYGAIDRKLYV 326
SV A+A++G L GQ + V+ S+AEKN ++Q T A P+ I
Sbjct: 197 SVIKALAMNGFELNGQRIRVQSSQAEKNRAARAAKMIQQQTVE--VADSPF-TIQVTGLT 253
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
G+L +++E ++R++F PFG + V++ D + G +++F + AK A +A+NG
Sbjct: 254 GSLS-SISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIKFKRTSEAKEAVTAMNG- 311
Query: 387 LEIVGRTLKVSSVTDHVGTQDTAAKSADFD----DDDGGGLALNAQSRALLMQKLDRTGI 442
+I G+T+KV+ T + + + D D+DGGGL A ++ LM KL RT
Sbjct: 312 FDIGGQTIKVAYATG-ASAKGRLSTHGEVDIERLDEDGGGLISGATNKIALMHKLQRTSS 370
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLL 502
T+ S G + N S ++ + P+ +
Sbjct: 371 DTNSHLSSGSSGDTN-SGISSK--------------------------------PTCNIT 397
Query: 503 LKNMF---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAA 558
L NMF DP++ ++P F E++ DV EEC+KYG+V +Y+++ G V+++F + +
Sbjct: 398 LSNMFSSSDPSV-SEPTFFDEVEEDVNEECNKYGKVLKVYINRGVIDGKVWVKFGNVVDS 456
Query: 559 ASAQRAMHMRWFARRLISAIFMKPEDYE 586
A R+++ R FA I A ++ E ++
Sbjct: 457 TVAFRSLNGRVFAGNTIKAEYVTDEYWQ 484
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 36/214 (16%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
E + R+VF Q+ + +R++++FF +AGKVRD RLI DR SRRSKGVGY+EF ++ SV
Sbjct: 286 EHEMRSVFVSQLSARVGDRELFQFFEQQAGKVRDARLITDRISRRSKGVGYVEFRELESV 345
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAG-------------------- 310
A+AL+G LLG PVMV+ +EAEKN Q N G
Sbjct: 346 QKALALTGTKLLGLPVMVQYTEAEKNRQAMANTQPNVPPGFVATAPPPPVPRPYVAPKAR 405
Query: 311 GTAT----GPYGAID----RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQC 362
G+A GP G D +LYVG+L+FN+T+ +R++F+PFG +E V L D TG+
Sbjct: 406 GSAYELNRGP-GPNDPNSYARLYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKS 464
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
KG+ FVQF + AK A +NG ++ GR L+V
Sbjct: 465 KGYAFVQFKNMHDAKNAMEKMNG-FQLAGRALRV 497
>gi|118357832|ref|XP_001012164.1| splicing factor, CC1-like family protein [Tetrahymena thermophila]
gi|89293931|gb|EAR91919.1| splicing factor, CC1-like family protein [Tetrahymena thermophila
SB210]
Length = 588
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 234/511 (45%), Gaps = 108/511 (21%)
Query: 121 ERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
R R ++D++ ER E + QS+ + S+S+ R+ S EL +
Sbjct: 116 HRSRSSKKDKKHHHSSERKTEEK----------QSQEAISKSQETRQLTSVERIEL---K 162
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
+RE E+++ + +D E D R+ TV YQ+P KA E+D++ +
Sbjct: 163 KRELEQQIEKLNKDAE------------------DAAREDLTVMIYQLPSKAEEKDIWRY 204
Query: 241 FSK---AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-------LSGQLLLGQP 290
+K A KVRD++LI D+ +++SKGV Y EFY V A+A L G+ +
Sbjct: 205 LTKHCGASKVRDIKLIRDQKTKKSKGVAYAEFYIKEDVDKALAADTKPFFLKGEEVPMSE 264
Query: 291 VMVKPSEAEKNLVQSNTSA---------------GGTATGPYGAIDRKLYVGNLH---FN 332
V ++ S+AEKN ++ +A GP K++VG L+ +
Sbjct: 265 VRIQHSQAEKN--RAALAAREIKRQRAEALKEQLAKLQEGPV-----KVFVGGLNGKLAD 317
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
M E L+ +F+ +G +E V+LP++ + G+C GFG++ F + A A +NG ++ +
Sbjct: 318 MNEQDLKDIFQKYGDIESVELPVNAQ-GKCLGFGYLTFKKKSDAHEAIKMMNG-FKLQDQ 375
Query: 393 TLKVSSVTDHV--------------GTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 438
+ V+ V ++ GTQ + D D ++ +A + LM+KL
Sbjct: 376 KISVTPVAVNLSFAPVQPLFPSSLGGTQ--TQDNIDLDQNENKVFLHSAAKKLELMKKL- 432
Query: 439 RTGIAT-SIAGSLGVA-PAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGS 496
G +T S+ G+ A P VN LP+ G +P++ P + F+
Sbjct: 433 -AGNSTLSVPGTETAAQPTVN--------TPLPIPG--IANLPSLNIAQNPQIQNNFMAG 481
Query: 497 --------PSECLLLKNMF-DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AG 546
P+ ++L NMF + + DP F +++ DV EEC KYG V ++V RS G
Sbjct: 482 NRPPTSLLPTNYIVLVNMFAESDFKNDPSFFADLKEDVSEECKKYGDVVEVFVAIRSPCG 541
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISA 577
V++ F A + + M R F R IS+
Sbjct: 542 SVFVLFNDAVGAVTCAKNMDGRMFNGRPISS 572
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 124/221 (56%), Gaps = 12/221 (5%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRD 249
RERD + ++ R + KK VE + RD TV + LKA E+ +YEFFS AGK+RD
Sbjct: 196 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 252
Query: 250 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN----LVQS 305
++LI D+ S SKGV Y+EFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 253 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 312
Query: 306 NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ---LRKLFEPFGPVELVQLPLDIETGQC 362
GG A +I ++YVG L ++ + Q LR LF PFG + V++P D TG
Sbjct: 313 QQQGGGAAESAVVSIPMRVYVGGLVDSLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 372
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 403
+G+GFV +A A A +N E++G+ L+V D V
Sbjct: 373 RGYGFVTYASAADAHEAMQHMN-NFELLGQQLRVGYAADGV 412
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 501 LLLKNMFDPA---METDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
++L NMF P ++ DP F L++ DV +EC K+G V+ +++D+R+ G V++RF +
Sbjct: 549 VVLHNMFAPKDVDLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVDGNVWIRFAHPD 608
Query: 557 AAASAQRAMHMRWFARRLISAIFM 580
A +A A++ R+FA + ISA F+
Sbjct: 609 QARAAFGALNGRYFAGKPISAEFI 632
>gi|405120919|gb|AFR95689.1| RNA splicing factor Pad-1 [Cryptococcus neoformans var. grubii H99]
Length = 588
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 179/366 (48%), Gaps = 79/366 (21%)
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSA--------G 310
+GY+E V V A+ALSG +++G P+ + +EAE+N L+ + A G
Sbjct: 262 IGYVELDSVDLVNKALALSGTVVMGIPINIMLTEAERNHSGTELITATALASNARSHGGG 321
Query: 311 GTATGPY------------------------GAID-RKLYVGNLHFNMTETQLRKLFEPF 345
G ++ P+ AI +L+V NL F++T +R++FEPF
Sbjct: 322 GRSSVPFTQNYPPLSTGLDLPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPF 381
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 405
G +E V L +D+ +G KG +VQF ++ A+ A A+ G ++ GR +KV ++ + GT
Sbjct: 382 GEIEFVDLHMDL-SGLRKGTAYVQFKDVKSAQMALDAMAG-FDLAGRLIKVQTIQER-GT 438
Query: 406 QDTAAKSADFDDDDGG-GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ 464
T D +D G G L+A R LM KL RT P VN S
Sbjct: 439 YQTP----DLIEDSGNYGTRLDANQRQQLMFKLART------------EPNVNLS----- 477
Query: 465 AISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGD 524
+S P + VPA+ P+ +++ NMF+P ET+ ++DL++ D
Sbjct: 478 -LSAPRINDSQSKVPAM--------------DPTPRIVVHNMFNPEEETERNWDLDLAED 522
Query: 525 VEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPE 583
V+ E SKYGRVK I V+K SAG VY+ F T++A A + ++ R+F R + A ++
Sbjct: 523 VKGEVESKYGRVKRIKVEKMSAGEVYIEFIDTDSAIKAVKGLNGRFFGGRQLQAGYITEA 582
Query: 584 DYEAKF 589
+ A
Sbjct: 583 LFNAHL 588
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 210 VEPEADPERDQRTVFAYQ------MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+ P DP+ + Y + T DV + F G++ V L MD + R KG
Sbjct: 341 LPPGLDPDAHKDAAIPYHRLFVSNLAFSLTADDVRQVFEPFGEIEFVDLHMDLSGLR-KG 399
Query: 264 VGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVK 294
Y++F DV S MA+ A++G L G+ + V+
Sbjct: 400 TAYVQFKDVKSAQMALDAMAGFDLAGRLIKVQ 431
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 123/221 (55%), Gaps = 12/221 (5%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRD 249
RERD + ++ R + KK VE + RD TV + LKA E+ +YEFFS AGK+RD
Sbjct: 191 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 247
Query: 250 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN----LVQS 305
++LI D+ S SKGV Y+EFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 248 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 307
Query: 306 NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ---LRKLFEPFGPVELVQLPLDIETGQC 362
G A +I ++YVG L N+ + Q LR LF PFG + V++P D TG
Sbjct: 308 QQQGGAAAESAVVSIPMRVYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 367
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 403
+G+GFV +A A A +N E++G+ L+V D V
Sbjct: 368 RGYGFVTYASAADAHEAMQHMN-NFELLGQQLRVGYAADGV 407
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 501 LLLKNMF---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
++L NMF D ++ DP F L++ DV +EC K+G V+ +++D+R+ G V++RF +
Sbjct: 540 VVLHNMFAAKDVNLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVDGNVWIRFAHPD 599
Query: 557 AAASAQRAMHMRWFARRLISAIFM 580
A +A A++ R+FA + ISA F+
Sbjct: 600 QARAAFGALNGRYFAGKPISAEFI 623
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 123/221 (55%), Gaps = 12/221 (5%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRD 249
RERD + ++ R + KK VE + RD TV + LKA E+ +YEFFS AGK+RD
Sbjct: 191 RERDEQQKKQREDELKKREVE---EARRDDLTVLVLNLCLKAEEKHIYEFFSANAGKIRD 247
Query: 250 VRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN----LVQS 305
++LI D+ S SKGV Y+EFY SV A+AL+G GQP+ V+ S AEKN +
Sbjct: 248 IQLIRDQRSGTSKGVAYVEFYTQESVIKAMALNGIAFKGQPLRVQASMAEKNRAARAAKQ 307
Query: 306 NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ---LRKLFEPFGPVELVQLPLDIETGQC 362
G A +I ++YVG L N+ + Q LR LF PFG + V++P D TG
Sbjct: 308 QQQGGAAAESAVVSIPMRVYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGL 367
Query: 363 KGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHV 403
+G+GFV +A A A +N E++G+ L+V D V
Sbjct: 368 RGYGFVTYASAADAHEAMQHMN-NFELLGQQLRVGYAADGV 407
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 501 LLLKNMF---DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTE 556
++L NMF D ++ DP F L++ DV +EC K+G V+ +++D+R+ G V++RF +
Sbjct: 540 VVLHNMFAAKDVNLKEDPHFFLDLGDDVRDECKKFGSVEKVWIDERNVDGNVWIRFAHPD 599
Query: 557 AAASAQRAMHMRWFARRLISAIFM 580
A +A A++ R+FA + ISA F+
Sbjct: 600 QARAAFGALNGRYFAGKPISAEFI 623
>gi|313230893|emb|CBY18890.1| unnamed protein product [Oikopleura dioica]
Length = 492
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 181/388 (46%), Gaps = 47/388 (12%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTV A Q+ E D+ +FFS G VR V+LI D +++G+ YIEF V SVP
Sbjct: 126 ERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIKDER-HKTQGLAYIEFKHVQSVP 184
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
+A+ L+GQ +LG+ ++V ++A+KN L Q+ + TGPY K+ V LH
Sbjct: 185 LAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKAGTGPY-----KIRVDKLHK 239
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN----GKL 387
+TE QL+ + EPFG VE VQ+ D TG G FV F E + A L+ G L
Sbjct: 240 TVTEEQLKMIMEPFGRVEKVQIIKDGFTGGSSGTAFVTFVDCEGGEDAIRHLHNFDLGGL 299
Query: 388 EIVGRTLKVSSVTDHV-GTQDTAAKSADFDDDDGGGLALNAQSRAL---LMQKLDRTGIA 443
++ R + V + + A A G+ Q +A+ + G+
Sbjct: 300 NLILRLVAKGKAAREVENSHNPNAMKAML------GVTAAPQKKAIEGVQYTPVKSEGMQ 353
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVG-QPAVPVPAVTAPVIPNMAAEFIGSPSECLL 502
I + + GS +L ++ + A P+ ++C
Sbjct: 354 FFIVMNHDHNFSTAGSGYGNSKAALRLMARRQAAPI------------------STQCFQ 395
Query: 503 LKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYLRFESTEAAASA 561
+ N FD + + +++ DV + S +G V H++VD+ S AG V+++ S + SA
Sbjct: 396 IVNAFD--VNEKGKWQDKVKKDVIQRVSNFGDVYHVHVDQNSLAGNVFVKVASAASCQSA 453
Query: 562 QRAMHMRWFARRLISAIFMKPEDYEAKF 589
++H R F R ++A ++ +Y F
Sbjct: 454 VNSLHGRQFRGRSVTAAYVPLPNYHQLF 481
>gi|358058197|dbj|GAA95989.1| hypothetical protein E5Q_02647 [Mixia osmundae IAM 14324]
Length = 959
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 182/411 (44%), Gaps = 124/411 (30%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
+ R+VF Q+ + ++ ++ FF ++AG VR+ ++I+DR SRRSKGVGY+EF ++ +V
Sbjct: 270 HEMRSVFVSQLAARIGDQQLHAFFENQAGPVREAKVIVDRISRRSKGVGYVEFMELETVQ 329
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN----LVQSN---------TSAGGTATGPYGAIDRK 323
A+ALSG +LG P+ V+ +EAEKN QS+ T G+ P GA+
Sbjct: 330 RALALSGMKVLGVPIQVQYTEAEKNRQASTAQSSYGALMDAGFTIPAGSDATPSGAVPYN 389
Query: 324 -LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
LYVG+L++++T +R++F PFG V V L D +G+ KG+ +VQF + A A+
Sbjct: 390 VLYVGSLNYSLTADDMREVFTPFGAVASVDLQTDPGSGKSKGYCYVQFYKHVDAIHAREK 449
Query: 383 LNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG-GGLALNAQSRALLMQKLDRTG 441
+NG ++ GR L++S++++ ++S DG G LN R LMQKL RT
Sbjct: 450 MNG-FQLAGRQLRISTISERNAILPPMSRSGPVALGDGEIGPNLNNIGRIELMQKLARTD 508
Query: 442 IATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECL 501
A+ NQ P P V P IP A S C+
Sbjct: 509 AAS-----------------NQ-------------PPPTVMRPNIPTAA-------SRCI 531
Query: 502 LLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIY-----------VDKR------- 543
L +K+++ D R
Sbjct: 532 L--------------------------------LKNMFDPAEETEPTWDTDLRDDVKEEI 559
Query: 544 ----------------SAGFVYLRFESTEAAASAQRAMHMRWFARRLISAI 578
+ G +YL+ E T AA A ++ RW LI+A+
Sbjct: 560 QSKYGAVAELVVQRDSTEGAIYLKMEDTNGAAKALSGLNGRW----LITAV 606
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 11/189 (5%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
PE D E DQRTVF ++ E+D+ + FS+AG V +VRLI D+ ++R KGVGY+EF
Sbjct: 257 PEPDEESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQ 316
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
V AIALSG +L GQ ++V + EK +++SN +TG G + ++YVG +H
Sbjct: 317 KEMVDKAIALSGSVLDGQQILVHSIQPEKKVIKSN------STGSSGG-ESRIYVGYIHL 369
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
++ E Q+R +F+P+G ++ + + + G K + F+QF E AK A + LNG E++G
Sbjct: 370 SVAEEQIRVIFQPYGDIDFIN--IHTKPGISK-YAFIQFKTQESAKRAITELNG-YELMG 425
Query: 392 RTLKVSSVT 400
+ LK++ V+
Sbjct: 426 KNLKLNMVS 434
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 11/190 (5%)
Query: 402 HVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAV 461
H ++ A S D DD GG+ L A RALL KL + T + +L N + +
Sbjct: 545 HTFKENNALSSLDEDD---GGIPLTAHGRALLTAKLQGKTL-TPPSNNLNNNINNNNNNI 600
Query: 462 NQQAISLPVVGQPAVPVPAVTAPV--IPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 519
N S V P++ + P +P+ A F+ S CL+L+NMFDP ET+ ++D
Sbjct: 601 NNLNNSTHTVINPSLASTGIITPYTQLPHFA--FV---STCLILRNMFDPETETEENWDQ 655
Query: 520 EIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIF 579
+I + ECS +G++ HIY+DK + G +Y+R+++ E+ A + +H RWF+++ I A
Sbjct: 656 DILSETHAECSTFGKIMHIYLDKNTKGCIYIRYDNNESPLKAIQKLHGRWFSKKQIIAEL 715
Query: 580 MKPEDYEAKF 589
+ Y+ +F
Sbjct: 716 VPEPVYKLQF 725
>gi|340508480|gb|EGR34174.1| splicing factor, putative [Ichthyophthirius multifiliis]
Length = 582
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 139/516 (26%), Positives = 244/516 (47%), Gaps = 83/516 (16%)
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
K K R R +++++ + + R++S + ++ S + ++++++ + E+ +
Sbjct: 96 KHKHRSRSAKKEKKSKHQN-----RKNSPPQKEANELSNTNLPEQQQKQQQSQQSEQRQQ 150
Query: 178 LERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDV 237
ER L ++++LE + R KE +E R+ TV YQ+P KA E+D+
Sbjct: 151 TSAER-----LERKKKELEEQIERLNKEAEEAT-------REDLTVMIYQLPTKADEKDI 198
Query: 238 YEFFSK---AGKVRDVRLIMDRNSRRSKGVGYIEFY---DVMSVPMA----IALSGQLLL 287
+++ K KVRD+++I D+ +++SKGV Y EFY DV A L G+ +
Sbjct: 199 WKYLVKHCGCTKVRDIKIIRDQRTKKSKGVAYAEFYIQEDVQKALQADTKPFILKGEEVP 258
Query: 288 GQPVMVKPSEAEKN--------LVQSNTSA-----GGTATGPYGAIDRKLYVGNLH---F 331
V+ S+AEKN + Q A GP K++VG L
Sbjct: 259 NSETRVQHSQAEKNRAALAAKQIKQQRAEALKEQLQKLQDGPV-----KVFVGGLTGKLA 313
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
+MT+T LR +F+ +G +E V+LP D+ G+C GFG++ F++ A A +A+N K +I
Sbjct: 314 SMTDTDLRDIFQQYGDIESVELPQDV-NGKCIGFGYIIFSKKSEAHEAINAMNNK-KISD 371
Query: 392 RTLKVSSVTD-------HVGTQDTAAKS-ADFDDDDGGGLALNAQSRALLMQKLDRTGIA 443
+ + V+ V+ H+ + ++ D D ++ AQSR LMQKL
Sbjct: 372 QQITVAPVSSLNPALAAHMPIIALSQENKVDLDQNENNIYLHTAQSRLQLMQKL------ 425
Query: 444 TSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTA---PVIPNMAAEFIG----- 495
AG+ P ++ S N LP+ G + +P++ P++ N I
Sbjct: 426 ---AGNNLSIPGLDQSLSNG---VLPIPGMNSNIIPSLNIANNPLLNNQITAGIHLKRPL 479
Query: 496 ---SPSECLLLKNMF-DPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRS-AGFVYL 550
P+ ++L NMF + D F +++ DV EEC K+G V + V +S G V++
Sbjct: 480 LSLVPTPYVVLVNMFLEGEGNGDSAFFADLKEDVAEECKKFGDVIQVIVAVKSPCGAVFV 539
Query: 551 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
F + +A + + M MR F +R I+ + E +
Sbjct: 540 IFNNEISAVNCAKNMDMRLFNQRQINCYCISEETLQ 575
>gi|67604702|ref|XP_666635.1| splicing factor [Cryptosporidium hominis TU502]
gi|54657670|gb|EAL36408.1| splicing factor [Cryptosporidium hominis]
Length = 563
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 189/435 (43%), Gaps = 91/435 (20%)
Query: 232 ATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQP 290
A E +VYEFF+ AG VRD+R+I D + RSKGV Y+EFY V SV A+ LSGQ ++ P
Sbjct: 145 AREFEVYEFFTTYAGNVRDIRIIRDHRTGRSKGVCYVEFYSVESVLKALKLSGQKIMNTP 204
Query: 291 VMVKPSEAEKN----------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ V+ S+AEKN + T G G + R + ++
Sbjct: 205 ITVQASQAEKNRAAKLAKLEEIKAETTPLLLRVDGLVGLLAR----------IRRDEIES 254
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV---- 396
LF FG V + + +D +T +C GF + F + A ALN EI G+ + V
Sbjct: 255 LFSTFGKVNKIDIEIDKKTQRCLGFAHILFEKAIEGHDAIKALNN-FEIAGQKITVTISQ 313
Query: 397 -------------SSVTDHVGTQDTAAKS-----------------ADFD--DDDGGGLA 424
SS + + + S ++FD D+ +
Sbjct: 314 ECNSSVKVSNCLASSTFNSYSSPSVVSNSQNEPSKGNSSAHNLERVSEFDKLDESEEAVL 373
Query: 425 LNAQSRALLMQKL-----------------DRTGIATSIAGSLGVAPAVNGSAVNQQAIS 467
L A SR L +KL +++I + +P+ + S +NQ
Sbjct: 374 LGADSRNFLTKKLLARAQSQIDNPPPIQETSNNTSSSTILNTSLPSPSSSISPLNQ---- 429
Query: 468 LPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSE--CLLLKNMFDP-----AMETDPDFDL- 519
L Q +PV T + EF S CLLL NMF +ME D +
Sbjct: 430 LSNTNQ-NLPVLTGTDSQSSSNNIEFNKSEIHLRCLLLSNMFTEQSIKESMEEDETIEQI 488
Query: 520 --EIQGDVEEECSKYGRVKHIYVDK-RSAGFVYLRFESTEAAASAQRAMHMRWFARRLIS 576
EIQ DVEEEC KYG + ++DK + G V++++ E A+ A+ H R+FA R ++
Sbjct: 489 LEEIQADVEEECGKYGTLLECFLDKEKMDGNVWVKYSRPEEASKAKMVFHGRFFAGRKLN 548
Query: 577 AIFMKPEDYEAKFKS 591
F+K E++ KS
Sbjct: 549 VSFIKDEEFPKAVKS 563
>gi|294932839|ref|XP_002780467.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
gi|239890401|gb|EER12262.1| RNA-binding region-containing protein, putative [Perkinsus marinus
ATCC 50983]
Length = 571
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 242/528 (45%), Gaps = 72/528 (13%)
Query: 91 RDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRR 150
R DRD+ RER R+ R RR+++ RR R + + S
Sbjct: 87 RGDDRDK---RERRHGREDHARRPRRDEDDRESRRHRDIERDRHHHHQSRHHQHRRDSPS 143
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVV 210
S R S+ R + +R R+ E LR +++ E +SRR E +
Sbjct: 144 RSRSRPRRPSKRDASRSPPAVNGTRARTKRSRDEEEYLRLQKKGRE-DDSRRGHEHQS-- 200
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEF 269
R RTV Q+ + T+R VY SK AGKVRDV++I D S+RSKG+ Y+EF
Sbjct: 201 -----RSRASRTVLIAQLGMDVTDRTVYLVMSKQAGKVRDVQIIRDGRSQRSKGIAYVEF 255
Query: 270 YDVMSVPMAIALSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG--AIDRKL 324
D S A+ + L LG ++PS+AE+NL S + + YG + +L
Sbjct: 256 EDQNSAVKALGIEPTSLWTKLGHGANIQPSQAERNLYPSQ-----SVSNAYGERVNECRL 310
Query: 325 YVG---NLHFNMTETQLRKLFEPFGPVELV-QLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
YVG NL +++E LR LF+PFGP++ V + P + G+ + FVQ+ EHA++A
Sbjct: 311 YVGGSANLVADLSEDDLRALFQPFGPLDFVDRHPRN--QGEGGTYAFVQYGDSEHARSAL 368
Query: 381 SALNGKLEIVGRTLKVSSVT-----DHVGTQDTAAKSADFD---DDDGG-----GLALNA 427
L+G + I G+ LKV T + + D D D++ G GL +
Sbjct: 369 KGLSGMM-IGGKELKVGMATSAASAGLSSSSVVVGANTDLDLVEDNEEGPSTHTGLLKDN 427
Query: 428 QSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIP 487
SRA LM+ + R IA GS S + + A LP + +
Sbjct: 428 LSRARLMRAMVREPIAE---GS---------SLLMKSATRLPA------------SNLAS 463
Query: 488 NMAAEFIGSPSECLLLKNMF---DPAM-ETDPD-FDLEIQGDVEEECSKYGRVKHIYVDK 542
+ G+ S L+L+N++ D M E P+ F EI DV+ E ++G + ++D+
Sbjct: 464 AASGAATGTGSRVLILRNLWAAGDQLMNEGGPEKFFKEITDDVKSEAKRFGTITGCWLDE 523
Query: 543 RS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
S G +L+F + AAA ++ RWFA R + A+ + + +EA
Sbjct: 524 ASENGDCWLKFTTGAAAAKCSLGLNRRWFAGRQLVAVIVSEDKWEAGL 571
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 132/256 (51%), Gaps = 16/256 (6%)
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
L + F G +E +QL +D ETG+ KG+GF+ F+ E AK A LNG E+ GR +KV
Sbjct: 169 LEEFFSTVGKIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNG-FELAGRPMKVG 227
Query: 398 SVTDHVGTQDTAAKSADFDDDDG--GGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAP 454
VT+ D ++ S+ D D+ G+ L R LM +L + TG L + P
Sbjct: 228 HVTERT---DASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTG--------LQIPP 276
Query: 455 AVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETD 514
A + +++ V + T AA ++C L NMF+P E +
Sbjct: 277 AAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEE 336
Query: 515 PDFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARR 573
+D EI+ DV EEC+K+G V HIYVDK SA G VY++ S AA +A A+H RWFA +
Sbjct: 337 VGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGK 396
Query: 574 LISAIFMKPEDYEAKF 589
+I+A ++ Y F
Sbjct: 397 MITAAYVPLPTYHNLF 412
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 204 KEKKEVVEP--EADPE-RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
K+K V EP PE RD RTVF Q+ + RD+ EFFS GK+ ++L+MD + R
Sbjct: 133 KDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSETGR 192
Query: 261 SKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
SKG G+I F D A+ L+G L G+P+ V
Sbjct: 193 SKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 226
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 36/180 (20%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
RTVFAY + L+A ERD++EFFSK G+V D+RLI D+N+++S+G+ Y+EF V V A+A
Sbjct: 79 RTVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAYVEFSKVEEVISAVA 138
Query: 281 LSGQLLLGQPVMVKPSEAEKNL----------------------VQSNTSAGGTAT---- 314
L+G +L GQPVMVK SEAEKN+ + S+T +GG T
Sbjct: 139 LTGNILKGQPVMVKASEAEKNMAWEAAQQQKHSAQAATHQLLSSLASSTGSGGKGTNQVA 198
Query: 315 ----GPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
GP L V NL + E ++++LF PFG +E VQL D TG+ G +++F
Sbjct: 199 LAGNGPC-----WLQVSNLVKELGEAEVQQLFAPFGKLEAVQLRRD-ATGRSTGIAYLKF 252
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 24/185 (12%)
Query: 416 DDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISL-PVVGQP 474
+D++GGG+ ++AQ R LM KL G A A V PA +AV +S+ PV+
Sbjct: 355 EDNEGGGIKMSAQGRVALMTKL--AGSAGLPAPPTSVLPAGVTNAVAHAVLSVDPVLLMQ 412
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPD---------FDLEIQGDV 525
V P P I +P CLLLKNMFD A E++ DV
Sbjct: 413 Q----GVLGPSSP------IATP--CLLLKNMFDAAASAGDAAAQNAAASVLAAEVEVDV 460
Query: 526 EEECSKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDY 585
EECS++G + H++VD +S GFVYLRF +T++A +A RA+H RW++ R I A + Y
Sbjct: 461 REECSRFGELLHVWVDAKSKGFVYLRFATTQSAEAAHRALHGRWYSGRQILAEYQFMPLY 520
Query: 586 EAKFK 590
+ FK
Sbjct: 521 NSHFK 525
>gi|334362319|gb|AEG78359.1| RNA binding motif protein 39 [Epinephelus coioides]
Length = 238
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 126/251 (50%), Gaps = 49/251 (19%)
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDD 417
ETG+ KG+GF+ FA E AK A LNG E+ GR +KV VT+ D++ S+ D+
Sbjct: 3 ETGRSKGYGFISFADAECAKKALEQLNG-FELAGRPMKVGHVTER---SDSSTASSFLDN 58
Query: 418 DDG--GGLALNAQSRALLMQKL-DRTGI--------ATSIAGSLGVAPAVN-------GS 459
D+ G+ L R LM +L + TG+ A + GS+ P N +
Sbjct: 59 DELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQMTGSI---PFGNIAAPPAVPT 115
Query: 460 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 519
QA++LP QP + CL L N+F+P E DP + +
Sbjct: 116 PAPSQALNLP--SQPLA---------------------THCLQLSNLFNPQAENDPSWAI 152
Query: 520 EIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAI 578
EIQ DV EEC+K+G + HIYVDK SA G VY++ S AA + A+H RWFA ++I+A
Sbjct: 153 EIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAA 212
Query: 579 FMKPEDYEAKF 589
++ Y F
Sbjct: 213 YVPLPTYHNLF 223
>gi|50553814|ref|XP_504318.1| YALI0E23628p [Yarrowia lipolytica]
gi|49650187|emb|CAG79917.1| YALI0E23628p [Yarrowia lipolytica CLIB122]
Length = 621
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 53/261 (20%)
Query: 155 SRRSSSRSRR---ERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVE 211
S R+ +R RR E ER ER + E E
Sbjct: 292 SERARARYRRWETEHERNYERRGPISKNHELSAE-------------------------- 325
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
+RD+RTV+ Q+ ++++FF++AG V DV L+ DR+S R +GV ++EF D
Sbjct: 326 -----DRDKRTVYVQQVAPHVQSTELFDFFAEAGPVHDVSLVKDRSS-RCRGVAFVEFED 379
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNL------VQSNTSAGGT------ATGPYGA 319
V SV AI L+G+ L GQ ++++ +++ +N N+S G+ A
Sbjct: 380 VESVSRAIGLTGRSLHGQALLIRCTDSARNREEQQSEASFNSSGAGSTHAVANVNASTSA 439
Query: 320 ID----RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
ID +LYVGN++F +TE ++ ++FE FGP+E L + +TG+ KG+ F+Q+ +
Sbjct: 440 IDSVRFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADLQKE-KTGKSKGYCFIQYVNPDD 498
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
AK A +NG E+ GR L+V
Sbjct: 499 AKTALEKMNG-FELAGRKLRV 518
>gi|294866432|ref|XP_002764713.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
gi|239864403|gb|EEQ97430.1| RNA-binding protein rsd1, putative [Perkinsus marinus ATCC 50983]
Length = 629
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 219/481 (45%), Gaps = 106/481 (22%)
Query: 138 RDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEM 197
R+G R++R R+ E E R+R +E +LR RE +
Sbjct: 226 REG--------------------RTKRSRD-----EEEYLRSRKRGKEEDLR-REHQHQS 259
Query: 198 RESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDR 256
R R RTV Q+ + ++R VY SK AGKVRDV++I D
Sbjct: 260 R------------------SRASRTVLIAQLGMDVSDRTVYLLMSKMAGKVRDVQIIRDG 301
Query: 257 NSRRSKGVGYIEFYDVMSVPMAIALSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTA 313
S+RSKG+ Y+EF + S A+ + L LG ++PS+AEKNL ++T A
Sbjct: 302 RSQRSKGIAYVEFEEQESAMKALGIEPTSLWTKLGHGANIQPSQAEKNL--NSTQA---V 356
Query: 314 TGPYG--AIDRKLYVG---NLHFNMTETQLRKLFEPFGPVELV-QLPLDIETGQCKGFGF 367
P G + +LYVG NL +++E LR LF+PFGP++ V + P + G+ + F
Sbjct: 357 LNPSGERVNECRLYVGGSANLVADLSEDDLRALFQPFGPLDFVDRHPRN--QGEGGTYAF 414
Query: 368 VQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQD----TAAKSADFD---DDDG 420
VQ+ +HA++A L+G + I G+ LKV T + D D D++
Sbjct: 415 VQYGDSDHARSALKGLSGMM-IGGKELKVGMATSAASAGLASSVVVGPNTDLDLVEDNEE 473
Query: 421 G-----GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAIS-LPVVGQP 474
G GL + SRA LM+ + R P GS++ ++ S LP
Sbjct: 474 GPSTHTGLLKDNLSRARLMRAMVRE-------------PISEGSSLLMKSASRLPA---- 516
Query: 475 AVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMF---DPAM-ETDPD-FDLEIQGDVEEEC 529
+ + + G+ S L+L+N++ D M E P+ F EI DV+ E
Sbjct: 517 --------SNLASAASGAATGTGSRVLILRNLWAAGDQLMHEGGPEKFFKEITNDVKSEA 568
Query: 530 SKYGRVKHIYVDKRS-AGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
++G + ++D+ S G +LRF + AAA ++ RWFA R + A+ + + ++
Sbjct: 569 VRFGTIVGCWLDEASENGDCWLRFTTGSAAAKCALGLNRRWFAGRQLVAVVVSEDKWDTG 628
Query: 589 F 589
Sbjct: 629 L 629
>gi|294882869|ref|XP_002769861.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239873674|gb|EER02579.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 364
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 8/193 (4%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
RD TV + K TE++VY F S+ AGKVRDV++I D + RSKGV Y+EFY S+
Sbjct: 151 HRDDCTVMVMGIHPKCTEKEVYVFMSQNAGKVRDVQVIRDPRTNRSKGVAYVEFYTPDSI 210
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH---FN 332
A+A +GQ L+G P+ ++ S+AEKN A + ++YVG L +
Sbjct: 211 LKALACNGQALMGHPIRIQASQAEKNRA---AEAARVVQNQQQDLPMRVYVGGLTGVLIH 267
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
+ E+++RKLF PFG ++ +++ TG+ +GF FV +++ A+ A +A++ K I
Sbjct: 268 LQESEIRKLFAPFGDIQCIEIAKSPYTGRPRGFAFVIYSRACDARVAIAAMH-KYRIADT 326
Query: 393 TLKVSSVTDHVGT 405
TL+V + V T
Sbjct: 327 TLEVGYLASAVNT 339
>gi|388583572|gb|EIM23873.1| splicing factor, CC1-like protein [Wallemia sebi CBS 633.66]
Length = 459
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 134/250 (53%), Gaps = 33/250 (13%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFS-KAGK--VRDVRLIMDRNSRRSKGVGYIEFYDVM 273
E +QR+VF Q+ + D+ FF + G+ + D R++MD+NSRRSKG+GY+E
Sbjct: 94 ESEQRSVFVSQLSTRTNSSDLRRFFQDRLGERSIVDARIVMDKNSRRSKGIGYVEVKTAS 153
Query: 274 SVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDR----------- 322
+ A+ L+G+LL G P++V SEA+KN +S+ T + + R
Sbjct: 154 LIDKALELTGELLNGIPMIVTQSEADKNRQAKASSSLQTQSVQAEEVRRSTKSRDYDNRS 213
Query: 323 ------------KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
K+YVG+L + + E +R +FEPFG +E V+L +D + + KG+ +V++
Sbjct: 214 STINPANDPTLYKVYVGSLSYTLKEYDVRSVFEPFGEIEDVELSVD-DQNRSKGYAYVKY 272
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSR 430
++E ++ A +N + E+ GRTLKV V + +S + + GL LN+ SR
Sbjct: 273 KRMEDSRMACEQMN-RFELAGRTLKVQLVNYYGDPVRMPEQSIENE-----GLNLNSVSR 326
Query: 431 ALLMQKLDRT 440
LM+ L R+
Sbjct: 327 HELMKTLMRS 336
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 501 LLLKNMFDPAMETDPDFDLEIQGDVEEEC-SKYGRVKHIYVDKRS-AGFVYLRFESTEAA 558
+LLK MF + ET+ ++ E+ DV+ EC +KYG+V+ I VDK S G + ++F + E+A
Sbjct: 365 VLLKYMFKASEETEAGWEKELAEDVKTECENKYGKVQEIGVDKESEEGEIVVKFYTIESA 424
Query: 559 ASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
A ++ RWF R + A+ + + E K
Sbjct: 425 EDAINGLNGRWFGGRQVKAVNIADKFLEMKL 455
>gi|326438129|gb|EGD83699.1| hypothetical protein PTSG_04304 [Salpingoeca sp. ATCC 50818]
Length = 541
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 184/412 (44%), Gaps = 77/412 (18%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFS-KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
+RD RTV Q+ T D+ +F KAGK+ R++ DRN+ RSKG+ Y EF D SV
Sbjct: 147 DRDARTVTCLQLHRTCTAEDLGQFLEEKAGKLVSCRIVRDRNTGRSKGIAYAEFEDESSV 206
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM-T 334
+A++L+GQ L G P++V P+ AE+N A A A R + V NL +
Sbjct: 207 TVALSLTGQRLKGAPLVVMPTMAERN-----RQAAEKAKQEQLARTR-VIVENLPEKIED 260
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAK----------------- 377
E L KLF FG V+ L D + G+ G+G+V F + AK
Sbjct: 261 EEALEKLFARFGRVKKGVLTKD-QFGRPLGYGYVVFGFAKDAKEAVTGMNGQAIDDKVLK 319
Query: 378 -----------AAQSAL------NGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDG 420
A+Q L N L R +++ +G
Sbjct: 320 VTLAVDASPQLASQVNLDTQPKPNLPLPQPNRPNFRPNMSMPLGQAPAVPAVV------- 372
Query: 421 GGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQ--AISLPVVGQPAVPV 478
SR L + L AP + V Q AI+ + QP P
Sbjct: 373 -----PPISRPPL-----------PMMAPLMPAPPMRPPGVPGQVPAITPMPMSQPTQPQ 416
Query: 479 PAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI 538
P+ +P ++ P+ L L NMFDPA ETDPD+ +++ +V E +KYG V HI
Sbjct: 417 PS-----LPGGVSQM---PTNFLKLSNMFDPAAETDPDWHEDVRDEVLEASTKYGPVFHI 468
Query: 539 YVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+VDK + G V+L+F+ + A+A A +AM+ R F R + A +MK Y +F
Sbjct: 469 FVDKTAPQGQVFLKFKDSVASAQAYQAMNGRLFDGRTVKAEYMKETFYTTRF 520
>gi|401888136|gb|EJT52101.1| hypothetical protein A1Q1_06639 [Trichosporon asahii var. asahii
CBS 2479]
gi|406699204|gb|EKD02415.1| hypothetical protein A1Q2_03307 [Trichosporon asahii var. asahii
CBS 8904]
Length = 612
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 203/494 (41%), Gaps = 139/494 (28%)
Query: 147 RSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEK 206
RS + Q S R RR S R+ +L E + E
Sbjct: 207 RSLELTLQRDYHSPRRRRG---SSARDEAADLLNEVDSE--------------------- 242
Query: 207 KEVVEPEADPERDQRTVFAYQMPLKATERDVYEFF-SKAG--KVRDVRLIMDRNSRRSKG 263
R+VF Q+ D+ FF K G VRD R+I DR+SRRS+G
Sbjct: 243 -------------ARSVFVSQLAASLKSSDLGLFFEDKLGPRTVRDARIINDRHSRRSRG 289
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL--------------------- 302
+GY+E V A+ALSG +++G P++V ++A N
Sbjct: 290 IGYVELASTDLVSKALALSGTIVMGIPILVTLTDASSNPDGMNLGAILATLKAERRERRE 349
Query: 303 -----------------VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPF 345
+ + +A A PY +L++ +L + +R++FEPF
Sbjct: 350 RIQQRRFPPLSPGLQHRLGVDVNAHAEAALPY----HRLFIADLAEVLNAEDIRQVFEPF 405
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGT 405
G +E V L D+ TG KG ++QFA+L A+ A A+N E+ +T+KV SV
Sbjct: 406 GEIEFVDLHTDV-TGTSKGTAYIQFAELNSAQMALDAMN-NFELADKTIKVMSV------ 457
Query: 406 QDTAAKSADFDDDD------GGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 459
++ +D++ G L+AQ R LM KL R + S AP
Sbjct: 458 --DPPRAPRIEDEERGGGNGRRGGRLDAQGRMDLMYKLARRENPDDSSRSRAPAP----- 510
Query: 460 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 519
QQ + P T ++ NM F+P ET+ ++D+
Sbjct: 511 --QQQERARP-----------TTFLLVSNM-----------------FNPDEETERNWDI 540
Query: 520 EIQGDVEEEC-SKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
++ DV+ E +KYG V I VDK S G VY+ F+ + A AQR + R+F R ++A
Sbjct: 541 DLADDVKVEVENKYGHVARIKVDKMSNKGDVYIEFKDIDGAERAQRGLQGRFFGGRSLTA 600
Query: 578 IFMKPEDYEAKFKS 591
++ E FKS
Sbjct: 601 QYIN----EGLFKS 610
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 181/401 (45%), Gaps = 62/401 (15%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
++ + +E D+ + F G + V + M R RSKG +IE+ S MA+A
Sbjct: 158 IYVGSLDYSLSEADLRQVFGSFGTI--VNIDMPREGNRSKGFCFIEYTTQESAEMALATM 215
Query: 283 GQLLL-GQPVMV-KPSEAEKNLVQSNTSAGGTATG---------------------PYGA 319
+ +L G+P+ V +P+ A + Q+N ++ G TG P
Sbjct: 216 NRFVLKGRPIKVGRPTNAIVSNNQNNNNSMGNHTGMVGMPVLPPENTNANIPPHQIPQNP 275
Query: 320 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE-TGQCKGFGFVQFAQLEHAKA 378
++Y+G++ ++ T LR +F+ FG + QL +E G +G+GF++F + AK
Sbjct: 276 PQNRIYIGSVPYSFTPDDLRHIFKAFGVILSCQLIPSVEKPGTHRGYGFIEFGTPDQAKL 335
Query: 379 AQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLD 438
A +NG E+ G+ LKV+ T + ++ ++ + ++ Q++
Sbjct: 336 AIETMNG-FEVGGKQLKVNVATALKPSNSISSNQIPI---------VSPTLQNVMSQQIP 385
Query: 439 RTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQP---AVPVPAVTAPVIPNMAAEFIG 495
T +I ++ + P ++ V P + QP VP PA + P+IPN +
Sbjct: 386 PT---LAIPPTMAIPPVLSMPNVTPLP---PNLYQPPNIPVPYPANSYPIIPNSTSN--- 436
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVK----HI--YVDKRSAGF-V 548
S +LL NM P + D E++ +V+ ECSKYG+V HI +V K S +
Sbjct: 437 --SNVILLTNMIGPE-----EVDDELKEEVKIECSKYGKVYDVRIHISDHVSKPSDRVRI 489
Query: 549 YLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
++ FE+ A A A++ RWF + E + + F
Sbjct: 490 FVVFETNTMAQIAVPALNNRWFGGNQVYCRLYNTERFYSSF 530
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
++YVG+L ++++E LR++F FG + + +P E + KGF F+++ E A+ A +
Sbjct: 157 RIYVGSLDYSLSEADLRQVFGSFGTIVNIDMPR--EGNRSKGFCFIEYTTQESAEMALAT 214
Query: 383 LNGKLEIVGRTLKVSSVTDHV 403
+N + + GR +KV T+ +
Sbjct: 215 MN-RFVLKGRPIKVGRPTNAI 234
>gi|159163856|pdb|2CQ4|A Chain A, Solution Structure Of Rna Binding Domain In Rna Binding
Motif Protein 23
Length = 114
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 69/93 (74%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTVF Q+ + RD+ +FFS GKVRDVR+I DRNSRRSKG+ Y+EF ++ SVP
Sbjct: 22 ERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVP 81
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA 309
+AI L+GQ LLG P++V+ S+AEKN + +S
Sbjct: 82 LAIGLTGQRLLGVPIIVQASQAEKNRLSGPSSG 114
>gi|328866609|gb|EGG14992.1| putative RNA splicing factor [Dictyostelium fasciculatum]
Length = 637
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 25/203 (12%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
D RT F + K E D+Y+FF++AGKV V L++DR +R+ KGVGY+EF + V A
Sbjct: 179 DLRTAFIQNLSPKVHESDLYDFFAQAGKVVKVSLVVDRITRKLKGVGYVEFKEKDMVDEA 238
Query: 279 IALSGQLLLGQPVMVKPSEAEK-----------------NLVQSN---TSAGGTATGPYG 318
+ L+GQ +LG + V + EK +L+ +N T+ T
Sbjct: 239 VKLTGQKVLGHTIAVHRVQPEKKSTATTIIGATTAMDATSLMATNADPTTLKNNTTSTV- 297
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
A + +LYVG L+ MTE Q+R LF P+G V+ + + I+ G K + FVQF E A
Sbjct: 298 AHNSRLYVGFLNLGMTEEQIRALFVPYGEVDFIN--VHIKPGIYK-YAFVQFRTSEAAAR 354
Query: 379 AQSALNGKLEIVGRTLKVSSVTD 401
A + LNGK +++G+ LK++ V++
Sbjct: 355 AHADLNGK-DLLGKPLKITFVSE 376
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 67/93 (72%)
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTE 556
PS C++LKNMFDP ET ++ EIQ DVEEEC+ +G +KHI++D+ S G++YL++++++
Sbjct: 539 PSPCMVLKNMFDPDSETGDEWPQEIQKDVEEECTNFGNIKHIFLDRYSQGYIYLKYDNSD 598
Query: 557 AAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
AA A ++ RWF+ +++SA F+ Y KF
Sbjct: 599 MAALAISKLNRRWFSSKMLSAEFIPETIYYQKF 631
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 65/92 (70%)
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKRSAGFVYLRFESTEA 557
++ LLLKNMFDPA E DP++ L+I+ V +EC K+G V HI+VD S GFV+++F S EA
Sbjct: 495 TQFLLLKNMFDPAQERDPEWQLDIRDTVLDECVKHGSVTHIFVDANSPGFVFIKFSSVEA 554
Query: 558 AASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
+ QR MH RWFA +LI+A ++ Y A+F
Sbjct: 555 CIAVQRTMHGRWFAGKLITADYVPEPMYHARF 586
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 65/246 (26%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ER + TV +Q+P + ++ + FS+ G++RDV + DR R+ GV Y+EF D +V
Sbjct: 189 ERLKNTVIVHQLPTNVRKHEIEQVFSECGEIRDVAIQSDRARGRAGGVAYVEFKDFAAVS 248
Query: 277 MAIALSGQLL---------------------------------LGQPVMVKPSEAEKNLV 303
A+ LS + + + +PV + P+ A N+
Sbjct: 249 KAMGLSSRRIDNIPMLVQATKPAAAALAMMGANAGGVSNTPAAIARPVTLNPNSAAYNIA 308
Query: 304 QSNTSAGGTATGPYGAI----------------------------DRKLYVGNLHFNMTE 335
++G T Y + ++YVG+L F +TE
Sbjct: 309 TYQMNSGMTVQNVYHTMPLHSSAVHSAPLPAAPLGTAAIAMAAKQQTRVYVGSLDFALTE 368
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
++ LF P G E++ + L+ + G+ KG+ FVQFA AK A LNG +E+ GR LK
Sbjct: 369 ADVKSLFSPCG--EVISVTLNRDNGKSKGYAFVQFADAGAAKLAME-LNG-VEVAGRPLK 424
Query: 396 VSSVTD 401
V+ TD
Sbjct: 425 VNFATD 430
>gi|345314908|ref|XP_003429563.1| PREDICTED: RNA-binding protein 39-like, partial [Ornithorhynchus
anatinus]
Length = 399
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 12/112 (10%)
Query: 241 FSKAGKVR----DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPS 296
F +A VR +R+I DRNSRRSKG Y+EF DV SVP+AI L+GQ +LG P++V+ S
Sbjct: 134 FKQAVAVRFGSGHLRMISDRNSRRSKGFAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQAS 193
Query: 297 EAEKN--LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFG 346
+AEKN +N G+A GP +LYVG+LHFN+TE LR +FEPFG
Sbjct: 194 QAEKNRAAAMANNLQKGSA-GPM-----RLYVGSLHFNITEDMLRGIFEPFG 239
>gi|224117778|ref|XP_002331629.1| predicted protein [Populus trichocarpa]
gi|224149815|ref|XP_002339522.1| predicted protein [Populus trichocarpa]
gi|222837035|gb|EEE75414.1| predicted protein [Populus trichocarpa]
gi|222874025|gb|EEF11156.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 107 bits (267), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/66 (75%), Positives = 59/66 (89%)
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF 269
+EPE DP+RDQRTVFAY M LKAT+R+ YEFFSKAGKV DVRLIM+RNSR SKGVG+IEF
Sbjct: 1 MEPETDPKRDQRTVFAYHMYLKATKRNFYEFFSKAGKVMDVRLIMERNSRLSKGVGHIEF 60
Query: 270 YDVMSV 275
YD +++
Sbjct: 61 YDELAL 66
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 431 ALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMA 490
ALL QK++ TGIA SIAG LGV P +NGSA NQQ ISLPV GQ + A+ P +P+ A
Sbjct: 65 ALLTQKINSTGIARSIAGCLGV-PLLNGSAPNQQFISLPVNGQTTMGAAALQTPALPSPA 123
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 112/193 (58%), Gaps = 6/193 (3%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
KK V+ AD +T+F ++ + F++ G+V R+ MDRN+ +S+G G
Sbjct: 294 KKVKVDEAADDSASTKTIFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFG 353
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMV-KPSEAEKNLV-QSNTSAGGTATGPYGAIDRK 323
++ F +V A+ L+G+ + G+P+ + K E ++N V + A G AT ++
Sbjct: 354 FVTFASPEAVDKALELNGKEIDGRPINIDKSVEKDQNQVRERRAKAFGDATSAPSSV--- 410
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L+VGNL F+ TE QL ++F +G V+ V++P D E+G+ KGFG+V+F +E AK A L
Sbjct: 411 LFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESAKKAHEGL 470
Query: 384 NGKLEIVGRTLKV 396
G+ EI GR +++
Sbjct: 471 AGQ-EIAGRAVRL 482
>gi|66363398|ref|XP_628665.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
gi|46229660|gb|EAK90478.1| splicing factor with 3 RRM domains [Cryptosporidium parvum Iowa II]
Length = 563
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 57/345 (16%)
Query: 71 GSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRE---- 126
+R D RD +E +R+ D + RE + + R + + RR+
Sbjct: 5 NNRLKSDFPRDYSRESSKRNYDYRKKDFYGRESDVTGHSNSYKPYRNEYPYKFRRKDQYF 64
Query: 127 RRD--REKERERERDGERRSSSRSRRSS-SQSRRSSSRSRRERERESERERELELERERE 183
R+D R ER R R+ + SR +S S R SS+ SRR E+ + +L++ +
Sbjct: 65 RKDSSRSPERYRNRNQISKGIEYSRSNSISPDRISSNSSRRYPNPNFEKNLDSKLDKVK- 123
Query: 184 RERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSK 243
+DLE RD TV + L A E +VYEFF+
Sbjct: 124 ---------KDLEY------------------SSRDDLTVLVMNLNLDAREFEVYEFFTT 156
Query: 244 -AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN- 301
AG VRD+R+I D + RSKGV Y+EFY V SV A+ LSGQ ++ P+ V+ S+AEKN
Sbjct: 157 YAGNVRDIRIIRDHRTGRSKGVCYVEFYSVESVLKALKLSGQKIMNTPITVQASQAEKNR 216
Query: 302 ---------LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
+ T G G + R + ++ LF FG V +
Sbjct: 217 AAKLAKLEEIKAETTPLLLRVDGLVGLLAR----------IRRDEIESLFSTFGKVNKID 266
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
+ +D +T +C GF + F + A ALN EI G+ + V+
Sbjct: 267 IEIDKKTQRCLGFAHILFEKAIEGHDAIKALNN-FEIAGQKITVT 310
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 500 CLLLKNMFDP-----AMETDPDFDL---EIQGDVEEECSKYGRVKHIYVDK-RSAGFVYL 550
CLLL NMF +ME D + EIQ DVEEEC KYG + ++DK + G V++
Sbjct: 463 CLLLSNMFTEQSIKESMEEDETIEQILEEIQADVEEECGKYGTLLECFLDKEKMDGNVWV 522
Query: 551 RFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKFKS 591
++ E A+ A+ H R+FA R ++ F+K E++ KS
Sbjct: 523 KYSRPEEASKAKMVFHGRFFAGRKLNVSFIKDEEFPKAVKS 563
>gi|146197845|dbj|BAF57634.1| rnpc2 protein [Dugesia japonica]
Length = 278
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 58/315 (18%)
Query: 278 AIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI--DRKLYVGNLHFNMTE 335
A+ L+GQ L+G P+ ++ +EK +A GT Y KL V NLH + E
Sbjct: 5 ALDLNGQKLMGVPIQIRTVSSEKC-----RAAEGTMNSSYIYFRGPTKLCVSNLHPQINE 59
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ ++F P+G ++ ++L DI G G F+ F + E+AK +N + G+ LK
Sbjct: 60 QMIEEIFSPYGKIDELRLMKDIR-GTSLGTAFILFRKGENAKNVVEQMN-DFNLAGQLLK 117
Query: 396 VSSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA 455
++ V + G + F ++ G +++ A R LM KL ++ L V P
Sbjct: 118 IAPVVEEGGLNE-------FGENQG--VSMTAADRLGLMAKL-------AVGTGLQVVPK 161
Query: 456 VNGSAVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDP 515
N +V AP+I S+C +L NMFD D
Sbjct: 162 AN----------------------SVQAPIIN----------SQCFVLSNMFDVKDAHDD 189
Query: 516 DFDLEIQGDVEEECSKYGRVKHIYVDKRSA-GFVYLRFESTEAAASAQRAMHMRWFARRL 574
F E+Q DV EC+++G V H+++D++S G +Y++ S A +H R F RL
Sbjct: 190 KFCKEVQDDVVGECNQFGGVYHVHIDRKSPRGEIYVKCPSIYVANKCVSTLHGRSFDGRL 249
Query: 575 ISAIFMKPEDYEAKF 589
I+A ++ E Y F
Sbjct: 250 ITANYIPLEHYHKMF 264
>gi|297721815|ref|NP_001173271.1| Os03g0153000 [Oryza sativa Japonica Group]
gi|255674214|dbj|BAH91999.1| Os03g0153000, partial [Oryza sativa Japonica Group]
Length = 103
Score = 106 bits (264), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/76 (76%), Positives = 63/76 (82%), Gaps = 4/76 (5%)
Query: 266 YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLY 325
YIEFYDVMSVPMAIALSGQLLLGQ VMVKPSEAEKNLVQSN S+ G A+ RKLY
Sbjct: 10 YIEFYDVMSVPMAIALSGQLLLGQQVMVKPSEAEKNLVQSNASSSGAAS----GGARKLY 65
Query: 326 VGNLHFNMTETQLRKL 341
VGNLH N+TE QLR++
Sbjct: 66 VGNLHSNITEDQLRQV 81
>gi|298708815|emb|CBJ30774.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 604
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR-SAGFVYLRFES 554
+P+ CLL+KNMFDPA ETD ++L+I+ ++EEECSK+G V H YV+ R G VY+ F +
Sbjct: 493 TPTFCLLVKNMFDPATETDEGWELDIKEEMEEECSKHGAVMHSYVESRQPGGLVYVMFST 552
Query: 555 TEAAASAQRAMHMRWFARRLISAIFMKPEDYEAKF 589
T AA ++ ++ RWFA R++ ++ P+ Y AKF
Sbjct: 553 TGAAVASAEMLNGRWFAGRMVLVEYLNPKVYTAKF 587
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 147/339 (43%), Gaps = 91/339 (26%)
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKV 247
+ E RDQRTVF Q+ +K TE D+ ++F G+V
Sbjct: 72 IDEL-------------------------TRDQRTVFVNQLTMKVTEDDLAKYFGLLGEV 106
Query: 248 RDVRLIMDRNSR---------------RSKGVGYIEFYDVMSVPMAIALSGQLLLGQ--P 290
+V ++ D+ + R KG Y+E + SVP+ + L+ ++ Q P
Sbjct: 107 NNVIMLRDKFTSRHKDGGDAMRGRALPRHKGFAYVEMKSLESVPVVLQLNERVPDFQKFP 166
Query: 291 VMVKPSEAEKNLV-----QSNTSAGGTATGPYGAI-DRKLYVGNLHFNMTETQLRKLFEP 344
VMVK SEAEKN + ++ G G A+ KL++GNLH N+TE L ++
Sbjct: 167 VMVKASEAEKNYLAKQEEKAKNPTGHVILGNAAALAGLKLHIGNLHQNITEDDLGEICRS 226
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS------- 397
FG V + L D E G+ K F FV +A E A L+G LE+ G+ L VS
Sbjct: 227 FGEVTQLILHRD-EAGESKRFAFVTYADTESTNACLEKLDG-LEVAGKALSVSYCKADPK 284
Query: 398 SVTDHV---------------------------GTQDTAAKS-ADFDDDDG-GGLALNAQ 428
S+ ++ G Q TAA S DDD+G GG+ +++
Sbjct: 285 SIPKNLDANVTATAAAAAAATAHAASLAAATTAGQQSTAASSNWKLDDDEGAGGVKMDST 344
Query: 429 SRALLMQKLDRTGIATSIAGSLGVA-----PAVNGSAVN 462
+RA +M + + +AG G+ P ++G+ +
Sbjct: 345 NRANIMSRFGGAAMNMGLAGIPGMMNHATLPGMSGTGMG 383
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 8/183 (4%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
E +++F ++ + + F++ G+V R+ MDRN+ +S+G GY+EF +V
Sbjct: 293 EEGTKSIFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFATTEAVE 352
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNM 333
A+ L+G+ + G+PV + SE + A G +A+ P L+VGNL ++
Sbjct: 353 AALLLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDSASEPSAV----LFVGNLSWDC 408
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
TE Q+ ++F G V+ V+LP D ETG+ KGFG+V+F +E AK A L+G E+ GR
Sbjct: 409 TEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETAKKAFEGLSG-TEVAGRP 467
Query: 394 LKV 396
+++
Sbjct: 468 IRL 470
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 211 EPEADPERDQ---RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYI 267
EP P+ ++ TVF + E + F+ G V R+I D+ + R+KG GY+
Sbjct: 170 EPTKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 268 EFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVG 327
F ++ A+AL+G L G+ + V S + + + G P A L++G
Sbjct: 230 TFESADALTAAMALTGTELDGREIRVDVSTPKP---PRDGNRQGRKEAPQSAPTTTLFLG 286
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
NL FN+TE ++R+ F +G + V+ P D +TG KGFG+V++ +E A+ A LNG +
Sbjct: 287 NLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNG-V 345
Query: 388 EIVGRTLKVSSVTDHVGTQD 407
EI GR+L++ D+ G +D
Sbjct: 346 EIAGRSLRL----DYAGGRD 361
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 110/186 (59%), Gaps = 7/186 (3%)
Query: 214 ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
A+ E + +T+F ++ + + F++ G+V R+ +DRN+ +S+G G++EF D
Sbjct: 336 AEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADAS 395
Query: 274 SVPMAI-ALSGQLLLGQPVMV--KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
SV AI ++G+ + G+PV V P + ++ A G +T ++ L+VGNL
Sbjct: 396 SVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKAFGDSTSAPSSV---LFVGNLS 452
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
++ TE + + F G V+ V+LP D E+G+ KGFG+V+F ++ AKAA AL+G EI
Sbjct: 453 WDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVDVDAAKAAFEALSG-TEIG 511
Query: 391 GRTLKV 396
GR++++
Sbjct: 512 GRSIRL 517
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 116/208 (55%), Gaps = 20/208 (9%)
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
E++E+ P+A + T++ + +AT DV EFF + G+++DVR+ +D + +++G
Sbjct: 123 EQEEIPVPKAAKTEENYTIWCGGISFEATADDVREFFGECGEIKDVRIRIDEATGKNRGF 182
Query: 265 GYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
+I+F + A+ALSG LG+ + + ++ K ++NTS +AT +K+
Sbjct: 183 CHIDFATQEAKDAAVALSGNEFLGRRIRIDGADGGK---KTNTSGPASAT-------KKV 232
Query: 325 YVGNLHFNMTE----TQLRKLFEPFGP-VELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 379
+V NL+ + E T L + F+ FG V ++LP + E+G KG G+++F E A+AA
Sbjct: 233 FVANLNRDYDEDAHRTALTEAFQEFGTIVGDIRLPYNRESGALKGIGYIEFETTEQAEAA 292
Query: 380 QSALNGKLEIVGRTLKVSSVTDHVGTQD 407
+NG +EI GR L+ TD G D
Sbjct: 293 VKGMNG-VEINGRPLR----TDFSGDND 315
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
VF Q+ + F G+V R++ DR+S++S+G GY+EF D+ S AI
Sbjct: 194 NVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK 253
Query: 282 SGQLLLGQPVMV------KPSEA-EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
G + G+ + V KP+EA EK N A L++G+L F++T
Sbjct: 254 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPA--------ETLWIGSLSFSVT 305
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E Q+ + F G V+ V+LP D +TG KGFG+VQF+ ++ A AA A+NG EI GR +
Sbjct: 306 EDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNG-AEIAGRAI 364
Query: 395 KV 396
+V
Sbjct: 365 RV 366
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
VF Q+ + F G+V R++ DR+S++S+G GY+EF D+ S AI
Sbjct: 197 NVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK 256
Query: 282 SGQLLLGQPVMV------KPSE-AEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
G + G+ + V KP+E AEK N A L++G+L F++T
Sbjct: 257 DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPA--------ETLWIGSLSFSVT 308
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E Q+ + F G V+ V+LP D +TG KGFG+VQF+ ++ A AA A+NG EI GR +
Sbjct: 309 EDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNG-AEIAGRAI 367
Query: 395 KV 396
+V
Sbjct: 368 RV 369
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
VF Q+ + F G+V R++ DR+S++S+G GY+EF D+ S AI
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEKD 257
Query: 283 GQLLLGQPVMV------KPSEA-EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
G + G+ + V KP+EA EK N A L++G+L F++TE
Sbjct: 258 GSEIDGRAIRVNYATQRKPNEAAEKRARVFNDKQSPPA--------ETLWIGSLSFSVTE 309
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
Q+ + F G V+ V+LP D +TG KGFG+VQF+ ++ A AA A+NG EI GR ++
Sbjct: 310 DQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKAMNG-AEIAGRAIR 368
Query: 396 V 396
V
Sbjct: 369 V 369
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
Query: 214 ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
+D + D +TVF ++ + + F+ G+V R+ MDRN+ +S+G G++EF
Sbjct: 314 SDSQEDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEFATAE 373
Query: 274 SVPMAIALSGQLLL-GQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
A+AL+GQ + G+ V + + A+ + A G +T ++ L+VGN+ F+
Sbjct: 374 GANAAVALNGQKEIDGRAVNLDKTSAKPADPERRAKAFGDSTSAPSSV---LFVGNVSFD 430
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
MTE L ++F +G V+ V+LP D +T + KG+G+V+F +E AK A G +++ GR
Sbjct: 431 MTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARG-MDVGGR 489
Query: 393 TLKV 396
T+++
Sbjct: 490 TIRL 493
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
VF Q+ + F G+V R++ DR+S++S+G GY+EF D+ + AI
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEKD 255
Query: 283 GQLLLGQPVMV------KPSEA-EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
G + G+ + V KP+EA EK N A L++G+L F++TE
Sbjct: 256 GSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDKQSPPA--------ETLWIGSLSFSVTE 307
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
Q+ + F G V+ V+LP D +TG KGFG+VQF+ +E A AA A+NG EI GR ++
Sbjct: 308 DQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNG-AEIAGRAIR 366
Query: 396 V 396
V
Sbjct: 367 V 367
>gi|167518462|ref|XP_001743571.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777533|gb|EDQ91149.1| predicted protein [Monosiga brevicollis MX1]
Length = 652
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 110/207 (53%), Gaps = 10/207 (4%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSK-AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
ERD+RTV Q+ K TE D+++F + AGKVR V ++ DRN+ R KGV Y EF + SV
Sbjct: 246 ERDERTVICSQLSRKTTEADLFDFLEQNAGKVRSVSMVRDRNTGRGKGVAYAEFLEPESV 305
Query: 276 PMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
P A+ L+GQ L P+++ ++A+K N A A A+ R L++ NL +T+
Sbjct: 306 PTALTLNGQRLNHAPIVIMLTQAQK-----NRQAAEKARLEREAMTR-LHITNLSEQVTD 359
Query: 336 TQ-LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
+ LR+L + FG V +L D E GQ KG FV++ + A A LN ++ +G TL
Sbjct: 360 DETLRELVKVFGRVRECKLVRD-EEGQPKGEAFVRYDEPNEANLALDGLN-EMTFLGNTL 417
Query: 395 KVSSVTDHVGTQDTAAKSADFDDDDGG 421
+ + A A+ GG
Sbjct: 418 RATLAAQTGMASGAPALGANMPPMAGG 444
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 78/168 (46%), Gaps = 42/168 (25%)
Query: 414 DFDDDDGGGLALNAQSRALLMQKL-DRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVG 472
D DD + GGL LN SR LM +L R +A V G
Sbjct: 503 DTDDTERGGLRLNGTSRVALMHRLASRANMA--------------------------VPG 536
Query: 473 QPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKY 532
P P +P L+L +MFDPA ET+ ++D ++ +V EEC+K
Sbjct: 537 MPGAKPPKPESPF---------------LVLHHMFDPAKETEANWDKDMAEEVLEECTKS 581
Query: 533 GRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
G V HI VDK S G +YL+F T +AA A M+ R+F R I+A +M
Sbjct: 582 GPVFHIVVDKTSQGDIYLKFSDTRSAAHASSVMNGRFFDGRQITAEYM 629
>gi|313243412|emb|CBY42180.1| unnamed protein product [Oikopleura dioica]
Length = 250
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 11/131 (8%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
ERD RTV A Q+ E D+ +FFS G VR V+LI D +++G+ YIEF V SVP
Sbjct: 126 ERDARTVIAMQLAHAIREFDLKDFFSSVGDVRAVKLIKD-ERHKTQGLAYIEFKHVQSVP 184
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKN-----LVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
+A+ L+GQ +LG+ ++V ++A+KN L Q+ + TGPY K+ V LH
Sbjct: 185 LAMGLTGQRVLGRAIVVHHAQADKNRHSEKLEQAKKNLMKAGTGPY-----KIRVDKLHK 239
Query: 332 NMTETQLRKLF 342
+TE QL+ +
Sbjct: 240 TVTEEQLKMIM 250
>gi|308473552|ref|XP_003099000.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
gi|308267803|gb|EFP11756.1| hypothetical protein CRE_26714 [Caenorhabditis remanei]
Length = 294
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 21/157 (13%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
K K + PE ERDQRT+ Q+ RD+ EFFS G VRDVR+I D + RSKG
Sbjct: 128 KNAKLELSPE---ERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRDVRIITDSRTGRSKG 184
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-------GTATGP 316
+ Y SVP+ +AL+GQ L+G P+ ++ + AE+N +++ A G A GP
Sbjct: 185 ICY------ESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMASTLGFVAPGAAKGP 238
Query: 317 YGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
+ V NLH +TE +R++FE FG +E +++
Sbjct: 239 A-----HVLVENLHPKITENMIREIFESFGRIEKLEM 270
>gi|240274521|gb|EER38037.1| RNA splicing factor [Ajellomyces capsulatus H143]
Length = 537
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 144/539 (26%), Positives = 216/539 (40%), Gaps = 118/539 (21%)
Query: 64 RDEDEENG-------SRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR 116
+ DE NG RD DR+R R R +RD D G E + + DR +
Sbjct: 74 KSHDESNGSRSERRDRDRDLDRERKRRNRSRERRHERDAD-GDEEMKSPKSDRASANGSN 132
Query: 117 EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
K R+ R R+R+ D R S R ++ R SRSR + R
Sbjct: 133 RSRKRSRSRDSGKRHSRRDRD-DPYRSSGGDYYRGPGRTTR--SRSRSPYDDRYYRPTGR 189
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPE-ADPERDQRTVFAYQMPLKATER 235
ER+ +R +R+RD R + + EP+ + ERD+RTVF Q+ + +
Sbjct: 190 SRRDERDDDRRSSKRDRDGRRRSPSSSRRRSRSPEPQLTEDERDRRTVFVQQLAARLRTK 249
Query: 236 DVYEFFSKAGKVRDVRLIMDRNSRRSK------GVGYIEFYDVMSVPMAI-ALSGQLLLG 288
++ FF K G V++ +++ DR S RSK G G+++F D A+ ++G L G
Sbjct: 250 ELIAFFEKVGPVKEAQIVKDRVSGRSKGRGRSRGYGFVQFRDPNQAREALEKMNGFDLAG 309
Query: 289 QPVMVK------PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLF 342
+P+ V E+ NL+Q G H N + LF
Sbjct: 310 RPIRVGLGNDKFTPESTANLLQRFQGQGA------------------HHNFQGS----LF 347
Query: 343 EPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDH 402
G + AQ+ +G D
Sbjct: 348 SGHG-----------------------------GRGAQAGGSGHF-------------DR 365
Query: 403 VGTQDT---AAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGS 459
G +D A ++ DD D G+ N SR LM+KL RT PA+ +
Sbjct: 366 AGGRDNDKAAGGASALDDTDVAGVNFNNYSRDALMRKLARTD-----------EPAIEPT 414
Query: 460 AVNQQAISLPVVGQPAVPVPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDL 519
++ + P V +PV NMA S C+LL+NMFDPA E +
Sbjct: 415 PDEKRKVPKPQVNAKPLPVSV-------NMA-------SRCVLLRNMFDPAEEEGESWIK 460
Query: 520 EIQGDVEEEC-SKYGRVKHIYVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISA 577
E++ DV EC KYG V HI +D + G +YL+F+ + +A + ++ R+F R ISA
Sbjct: 461 ELEDDVRAECEDKYGHVVHIALDPNTQGDIYLKFDRVQGGENAIKGLNGRFFGGRQISA 519
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 104/185 (56%), Gaps = 8/185 (4%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
D + + +++F ++ + + F++ G+V + MDR++ RS+G GY+ F +
Sbjct: 327 DVDNEIKSIFVGRLSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEA 386
Query: 275 VPMAIALSGQLLLGQPVMV---KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
V AI L+G+ + G+ V V P + + + + G T + P L+VGNL F
Sbjct: 387 VEKAIELNGKEIDGRAVNVDKSNPPNKDASREKRAKTFGDTTSPPSAT----LFVGNLSF 442
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
M + L + F G V+ V+LP D E+G+ KGFG+V+F+ +E AK A +A+ G +E+ G
Sbjct: 443 GMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQG-VELDG 501
Query: 392 RTLKV 396
R++++
Sbjct: 502 RSVRL 506
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 211 EPEADPERDQR-------TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
EPE P++ + +F + E + F + G+++ VR+I DR+S RSKG
Sbjct: 228 EPEQSPKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKG 287
Query: 264 VGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG---- 318
GY+EF + A+ A +G L + + + S +N Q+ G YG
Sbjct: 288 FGYVEFENAEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQQYGDKAS 347
Query: 319 AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKA 378
+ L+VGNL F+ TE +R+ FE G + ++LP D E+G KGFG+V+ ++ AKA
Sbjct: 348 EPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAKA 407
Query: 379 AQSALNGKLEIVGRTLKVSSVT 400
A AL G ++ GR +++ T
Sbjct: 408 AYEALQG-ADLGGRPMRLDYST 428
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
T+F ++ + F + G+V R+ MDRN+ +S+G GY+EF +V A+ L
Sbjct: 301 TIFVGRLSWNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKL 360
Query: 282 SGQLLLGQPVMV-KPSEAEKNLVQSN--TSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
+G+ + G+P+ V K + K+ V+ + + G + P L+VGNL F+ +E L
Sbjct: 361 TGKEIDGRPINVDKSTGVSKDKVRDSRAKAFGDQKSEP----SSTLFVGNLSFSASEDVL 416
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+ F +G V+ V++P D ETGQ KGF +V F +E AK A G ++I GR +++
Sbjct: 417 WEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKAHDEGAG-MDIAGRAVRL 473
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
+ VF Q+ + F+ G++ + MDRN+ +S+G GY+ F V + A+
Sbjct: 327 KAVFVGQLSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKALE 386
Query: 281 LSGQLLLGQPVMV------KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
L+G+ + +P+ V P A + Q+ G T P L+VGNL FN +
Sbjct: 387 LNGKEIDNRPIKVDISTPRNPDAARQKRAQTF----GDVTSP---PSNTLFVGNLSFNTS 439
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E + LF +G V+ V+LP D E+G+ KGFG+V+F +E AK A A NG ++ GR +
Sbjct: 440 EDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEANNG-ADLDGRPI 497
Query: 395 KV 396
++
Sbjct: 498 RL 499
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E E+ + + ++R E + K+ K E+ P + +F + E +
Sbjct: 205 EEEKPKAVESKKRKAEAEPAHATKKNKTDAVDESAPTGN---LFVGNISWNVDEEWLTRE 261
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F + G++ VR+I DR+S RSKG GY+EF D + A+ A +G L G+ + + S
Sbjct: 262 FEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPR 321
Query: 300 KN-----LVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELV 351
N +SN A G T P L+VGN+ F+ E + + F+ G ++ V
Sbjct: 322 TNDGPGAGNKSNDRAARFGDTTNAPAAT----LFVGNISFDADENAITEYFQEHGTIKAV 377
Query: 352 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+LP D ETG KGFG+V+ + +E A+AA +AL G +I GR +++
Sbjct: 378 RLPTDRETGAPKGFGYVEMSSIEEAQAAFTALQG-ADIAGRPIRL 421
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 28/173 (16%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLL--------LGQPV 291
F + G ++ VR+I DR+S RSKG GY+EF A+ A G L LG P
Sbjct: 273 FEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEARHGYTLDNRELRVDLGTP- 331
Query: 292 MVKPSEAEKNLVQS--------NTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFE 343
A++N Q+ G T + P L+VGN+ F+ T+ + ++F+
Sbjct: 332 -----RAQRNDGQTPQQRSNDRQKQYGDTPSQPSAT----LFVGNISFDATQDMVTEVFQ 382
Query: 344 PFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+G + V+LP D ETG KGFG+V+F+ +E AK+A L G ++I GR +++
Sbjct: 383 EYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENLTG-VDIAGRPIRL 434
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 89/158 (56%), Gaps = 7/158 (4%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G+V + MDR + RSKG GY+ F + AIA ++G+ + G+ V V + +
Sbjct: 411 FEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPK 470
Query: 300 K-NLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
N G T + A + L+VGN+ FN E L + F G + V+LP D E
Sbjct: 471 TPNPAGRAKQFGDTVS----AESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRE 526
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
TGQ KGFG+V+F +E+AK+A +ALNGK +I GR +++
Sbjct: 527 TGQMKGFGYVEFTSVENAKSAFNALNGK-DIAGRNIRL 563
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 90/163 (55%), Gaps = 11/163 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F G++ VR++ DR+S RS+G GY+EF + A A G L G+P+ + + A
Sbjct: 285 FESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANAR 344
Query: 300 KNL------VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
+N Q+ + G T P L++GN+ F E +++ F +G + ++L
Sbjct: 345 QNAGGAKDRSQARAKSFGDQTSPE---SDTLFIGNISFGADENAIQETFSSYGTISGIRL 401
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
P D E+G+ KGFG++QF+ ++ A++A + L G E+ GR +++
Sbjct: 402 PTDPESGRPKGFGYIQFSSVDEARSALNELQGS-ELAGRAMRL 443
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 181 ERERERELRERERDLEMRESR--------RYKEKKEVVEPEADPERDQRTVFAYQMPLKA 232
E ++ EL R +L+ +R R + + + + PE D T+F + A
Sbjct: 324 EAKKGAELDGRPLNLDYANARQNAGGAKDRSQARAKSFGDQTSPESD--TLFIGNISFGA 381
Query: 233 TERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
E + E FS G + +RL D S R KG GYI+F V
Sbjct: 382 DENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQFSSV 421
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 204 KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
+E TVF + + F+ G+V R+++DR+++RS+G
Sbjct: 200 QEA-------------TNTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRG 246
Query: 264 VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
GY+EF DV S AI G+ L G+ V V + A K P
Sbjct: 247 FGYVEFADVDSAIKAIEFEGKELDGRAVRVNFANARKPDADKRAKVFNDKRSPPA---DT 303
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L++G+L F+ TE + + F +G V+ V+LP D ETG KGFG+V F + A AA AL
Sbjct: 304 LWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEAL 363
Query: 384 NG 385
NG
Sbjct: 364 NG 365
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF-YDVMSVPMAIAL 281
+F Q+ + + F + G V+ R+ +DR S RS+G GY+EF ++V
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQF 266
Query: 282 SGQLLLGQPVMVKPSEA-EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+G+ + G+PV V S N + S G + P L++GNL FN E ++ +
Sbjct: 267 AGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQRSDP----SNTLFIGNLSFNTNEDRVWE 322
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
F FG VE V++P D ETG KGFG+V FA ++ AKAA G E+ GR +++ T
Sbjct: 323 FFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAIDGAAGS-ELDGRVIRLDFST 381
>gi|397610803|gb|EJK61025.1| hypothetical protein THAOC_18547 [Thalassiosira oceanica]
Length = 178
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 25/184 (13%)
Query: 230 LKATERDVYEFFSK--AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL 287
++A ERDV +F + VRDV+L+ D+ + R +G Y+E + V +A+A +G +
Sbjct: 1 MRADERDVRHYFRRRVGVSVRDVQLLRDKRTGRHRGCAYVELGSLTDVTLALASTGTVPD 60
Query: 288 GQ--PVMVKPSEAEKNLVQSNTSAGGTATGPYGAID---------------RKLYVGNLH 330
Q P++VK SEAEKN + G TA G G + +K+YVG++
Sbjct: 61 FQRFPILVKHSEAEKN-----AAPGSTALGIGGDMTAASSSSGTGPGGSEAQKVYVGSID 115
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
+T+ QL LF FGP++ V L +D TGQ +GF F+ + A A + G++ +
Sbjct: 116 AAVTQAQLYALFSAFGPLQKVLLQMDPLTGQSRGFAFLSYRDARDANLAIRTMGGQV-VA 174
Query: 391 GRTL 394
GR L
Sbjct: 175 GRQL 178
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 10/187 (5%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E + FS+ G++ VR++ DR S RS+G GY+E+
Sbjct: 247 PEGASANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADA 306
Query: 276 PMAIALS-GQLLLGQPV---MVKPSEA--EKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
A+ G L G+ + P +A +++ Q + G T P L+VGNL
Sbjct: 307 AKAMEAKKGTDLDGRTINLDYAAPRQANPQQDRTQDRARSYGDQTSPE---SDTLFVGNL 363
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
F+ TE L ++F G V ++LP + ETG+ KGFG+VQF+ ++ AKAA ALNG E+
Sbjct: 364 PFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGH-EL 422
Query: 390 VGRTLKV 396
GR +++
Sbjct: 423 EGRAVRL 429
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 185 ERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKA 244
E E ++R E K+ K V EP + +F + E + F
Sbjct: 200 EEEAPSKKRKAEEAAEPAIKKTKTVEEPAG--AEGIKNLFVGNLSWNIDEDWLRREFEGF 257
Query: 245 GKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL-GQPVMVKPSEAEKNLV 303
G++ R+I DR + R KG GY+EF A A Q L G+P+ V S +
Sbjct: 258 GEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEMHQYELDGRPLNVDFSTPRQK-- 315
Query: 304 QSNTSAGGTA--TGPYG----AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 357
AG T YG A L++GNL F+ T ++++F +G + V LP D
Sbjct: 316 ---PDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDR 372
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+TG KGFG+V F E A AA ALNG+ +I GR +++
Sbjct: 373 DTGSIKGFGYVDFGSQEEATAALDALNGQ-DIAGRNIRI 410
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 14/205 (6%)
Query: 201 RRYKEKKEVVEPE---ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R+ ++++EVV P+ +P + +F + E + F + G++ VR++ DR+
Sbjct: 209 RKAEDEEEVVAPKKTRVEP-TEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 267
Query: 258 SRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGG 311
S RSKG GY+EF + A A L G+ L + + A ++ QS G
Sbjct: 268 SGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 327
Query: 312 TATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
P L++GN+ F+ E+ + + F +G + V+LP D E+G+ KGFG+VQF+
Sbjct: 328 DQKSPE---SDTLFIGNIAFSADESMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFS 384
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKV 396
++ A++A +LNG E+ GR +++
Sbjct: 385 SIDEARSAFESLNGS-ELAGRAMRL 408
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 22/166 (13%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV------ 293
F++AG+V R+ MDR + +SKG GY+EF D S A+ ++G+ + G+PV +
Sbjct: 292 FAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPR 351
Query: 294 ---KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
P K S + T L+VGNL F+ T+ + +LF G V
Sbjct: 352 GPPNPERRAKAFGDSRSEPSAT-----------LFVGNLAFSATQDAVYELFGAVGEVVN 400
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
V+LP D ++GQ KGFG+V+FA +E A A + L G + GR +++
Sbjct: 401 VRLPTDRDSGQPKGFGYVEFADVETASKALNELGG-TDFEGRNIRL 445
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 191 RERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 250
++R +E ES E K+ + + T+FA ++ + + F V
Sbjct: 225 KKRKIEEAESINTPENKKAKSESFTTDEEPATIFAGRLSWNIDDDWLKREFEHLEGVISA 284
Query: 251 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQSNTSA 309
R+IM+R + +S+G GY++F + AIA + G+ + G+P+ + S + + +SN
Sbjct: 285 RVIMERATGKSRGYGYVDFSSKSAAENAIAEMQGKEIDGRPINLDLSTGKPHATKSNNDR 344
Query: 310 GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQ 369
L++GNL FN +L ++F +G V +LP +T Q KGFG+VQ
Sbjct: 345 ARQFGDQQSPPSDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQ 404
Query: 370 FAQLEHAKAAQSALNG 385
F+ ++ AKAA ALNG
Sbjct: 405 FSSVDEAKAALEALNG 420
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
TVF Q+ AT ++ F + G V DVRL M N +S+G +I+F A+AL
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 282 SGQLLLGQPVMVKPSE-AEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
G +G+ + V ++ A+ +N YG K++V NL ++ E L++
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTN----------YGPKTDKVFVANLSYDTDEDSLKQ 191
Query: 341 LFEPFGP-VELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 399
FE FG V + LP+ +TG+ +G ++QF + A+AA +NG + + GR ++
Sbjct: 192 AFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAEAAVKGMNG-VYLDGRPIR---- 246
Query: 400 TDHVGTQD 407
TD G D
Sbjct: 247 TDFSGDND 254
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+F + + +Y+ F + R+I DR ++RS+G GY+EF V A
Sbjct: 167 TLFVGNLSWNVDDSVLYDEFKGFDGLTGARVITDRETQRSRGFGYVEFDSVEHAQAAFDK 226
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-----GTATGPYGAIDRKLYVGNLHFNMTE 335
++G L G+ + + S +N +A G T P L+VGNL F+ E
Sbjct: 227 MTGYFLDGRELKIDFSTGRAKSNDANPAASRAKKYGDVTSPESDT---LFVGNLSFDADE 283
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ F V+ ++LP D+E+G+ KGFG+V F LE +K A LNG+ GR ++
Sbjct: 284 ETVSAFFSEVANVKSLRLPTDMESGRPKGFGYVSFYSLEDSKKAFDTLNGQ-SCAGRNVR 342
Query: 396 VSSVT 400
+ T
Sbjct: 343 LDYST 347
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 224 FAYQMPLKATERDVYEFFSKAG--KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
F +P A E V +FF G V VRLI DR++ R KG GYIE V +AL
Sbjct: 183 FIGNLPWSAEEDTVKQFFESQGVSAVYAVRLITDRDTGRKKGFGYIE-TSASDVDAVLAL 241
Query: 282 SGQLLLGQPVMV-----KPSEAEKNLVQSNTS--AGGTATGPYGAIDRKLYVGNLHFNMT 334
+G G+ + V +P+ A+++ + +G AT D +++GNL FN T
Sbjct: 242 NGADFEGRELKVDKANERPANADRDTKPRDAPRQSGEAAT------DGNVFLGNLSFNST 295
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E + E FG V+ V++ D ET + +GFG+ +F + A A +A +G +++ GR +
Sbjct: 296 EDSIWAALEQFGTVKAVRIVYDRETQRPRGFGYCEFEDADTANKAIAA-SGTVDVDGRQI 354
Query: 395 KVSSVT 400
++ + T
Sbjct: 355 RIDTAT 360
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 11/163 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F G++ VR++ DR+S RS+G GY+EF + A A + G+ + + + A
Sbjct: 284 FESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANAR 343
Query: 300 KNL------VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
+N QS + G T P L++GN+ FN E +++ F G + ++L
Sbjct: 344 QNAGGARDRAQSRAKSFGDQTSPE---SDTLFIGNISFNADENAVQETFSSHGSILGIRL 400
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
P D E+G+ KGFG+VQF+ ++ A++A +AL G E+ GR +++
Sbjct: 401 PTDPESGRPKGFGYVQFSSVDEARSAFNALQG-TELAGRAMRL 442
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
+ PE D T+F + A E V E FS G + +RL D S R KG GY++F V
Sbjct: 363 QTSPESD--TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSV 420
Query: 273 MSVPMAI-ALSGQLLLG 288
A AL G L G
Sbjct: 421 DEARSAFNALQGTELAG 437
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 11/163 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F G++ VR++ DR+S RS+G GY+EF + A A + G+ + + + A
Sbjct: 282 FESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANAR 341
Query: 300 KNL------VQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
+N QS + G T P L++GN+ FN E +++ F G + ++L
Sbjct: 342 QNAGGARDRAQSRAKSFGDQTSPE---SDTLFIGNISFNADENAVQETFSSHGSILGIRL 398
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
P D E+G+ KGFG+VQF+ ++ A++A +AL G E+ GR +++
Sbjct: 399 PTDPESGRPKGFGYVQFSSVDEARSAFNALQG-TELAGRAMRL 440
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
+ PE D T+F + A E V E FS G + +RL D S R KG GY++F V
Sbjct: 361 QTSPESD--TLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYVQFSSV 418
Query: 273 MSVPMAI-ALSGQLLLG 288
A AL G L G
Sbjct: 419 DEARSAFNALQGTELAG 435
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
D + +T+F Q+ E + F V + R++ D RSKG+GY++F
Sbjct: 247 DGSEESKTLFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRAD 306
Query: 275 VPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLH 330
A+A G + G+P+ + + A +N S A G + + P L+VGNL
Sbjct: 307 AEKALAEKQGAEIDGRPINLDFTTARQNNNNSQDRARKFGDSESPP----SDTLFVGNLS 362
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
FN E L G V V++P D +TG KGF +V F+ ++ AK A +A+NG+ ++
Sbjct: 363 FNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQ-QVC 421
Query: 391 GRTLKV 396
GR+++
Sbjct: 422 GRSIRT 427
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F +AG V R++++R++ +S+G GY++F + A+ L G+ + G+PV + S +
Sbjct: 201 FEEAGGVISARVMIERSTGKSRGYGYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGK 260
Query: 300 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 359
SN A P D L++GNL FN +L ++F +G V +LP +T
Sbjct: 261 PKTPASNDRAKKFGDVPSAPSD-TLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDT 319
Query: 360 GQCKGFGFVQFAQLEHAKAAQSALNG 385
Q KGFG+VQF+ +E A+ A ++LNG
Sbjct: 320 QQPKGFGYVQFSSVEEAQNALNSLNG 345
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 201 RRYKEKKEVVEPE---ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R+ ++++EVV P+ +P + +F + E + F + G++ VR++ DR+
Sbjct: 225 RKAEDEEEVVAPKKTKVEPT-EGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 283
Query: 258 SRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGG 311
S RSKG GY+EF + A A L G+ L + + A ++ QS G
Sbjct: 284 SGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 343
Query: 312 TATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
P L++GN+ F+ E + + F +G + V+LP D E+G+ KGFG+VQF+
Sbjct: 344 DQRSPE---SDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFS 400
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKV 396
++ A++A +LNG E+ GR +++
Sbjct: 401 SIDEARSAFESLNGS-ELAGRAMRL 424
>gi|403419677|emb|CCM06377.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 8/180 (4%)
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
+++F ++ + + F+ G+V R+ MDRN+ +S+G Y+ F + A+
Sbjct: 313 NKSIFVGRLSWNVDNEWLAQEFADCGEVVSARVQMDRNTGKSRGFAYVTFATAEAAQAAL 372
Query: 280 ALSGQLLLGQPV---MVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
L+G+ + G+PV M + + G + P L+VGNL F+ TE
Sbjct: 373 QLTGKEIDGRPVNIDMTTERDPNAARQNRAAAYGDKPSEPSAV----LFVGNLSFSATED 428
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L + F +G V+ V++P D ETG KGF +V+F+ +E AK+A ++GK EI GR +++
Sbjct: 429 LLWETFSEYGDVKSVRVPTDRETGSPKGFAYVEFSDVETAKSAYEGVSGK-EIAGRAVRL 487
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E V FS+ G++ VR++ DR + RS+G GY+E+
Sbjct: 206 PEGAVANLFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADA 265
Query: 276 PMAIALS-GQLLLGQPVMVKPSEAEKNLVQSNTSAG----------GTATGPYGAIDRKL 324
A+ G L G+ + + + Q+NT G T P L
Sbjct: 266 AKAMEAKKGTDLDGRTINLDYAAPR----QANTQGADRSQDRARSYGDQTSPE---SDTL 318
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
+VGNL F+ TE L ++F G V ++LP + ETG+ KGFG+VQF+ ++ AKAA +ALN
Sbjct: 319 FVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALN 378
Query: 385 GKLEIVGRTLKV 396
G E+ GR +++
Sbjct: 379 GH-ELEGRAIRL 389
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 157 RSSSRSRRERERESERERELELERERERERELRERERDLEMRESR--------RYKEKKE 208
R + RSR E + E ++ +L R +L+ R R +++
Sbjct: 246 RETGRSRGFGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRAR 305
Query: 209 VVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIE 268
+ PE D T+F +P ATE ++E F G V +RL ++ + R KG GY++
Sbjct: 306 SYGDQTSPESD--TLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQ 363
Query: 269 FYDVMSVPMA-IALSGQLLLGQPV 291
F + A AL+G L G+ +
Sbjct: 364 FSSIDEAKAAHAALNGHELEGRAI 387
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 158/401 (39%), Gaps = 110/401 (27%)
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
Q ++ + TE D+ FS G ++ + L D + RS+G +IE+ + AI
Sbjct: 602 QSRIYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINAI 661
Query: 280 ------ALSG-QLLLGQPVM--VKPSEA---------------EKNLVQSNTSAGGTATG 315
+SG Q+ + QP + + P+ + N++ SNT T+
Sbjct: 662 QNMNQKTISGRQIKVRQPSIPVINPAATGVSVGMGGGGMSEILQPNIIPSNTFLSSTSVA 721
Query: 316 PYGAI--------------DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQ 361
+ D ++YVG++ +N TE Q++ +F G V L ++ETG+
Sbjct: 722 SSFSSQALLNNTPVKERDNDNRVYVGSVPWNATEDQIKTIFSSIGNVVSCSLKPNLETGR 781
Query: 362 CKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQDTAAKSADFDDDDGG 421
G+GF+ + + A+ A S NG +I GR LKV + + +++DG
Sbjct: 782 HMGYGFIDYDNPKSAEDAISTFNG-YDINGRQLKV---------RKPVRNAPKVNNNDGN 831
Query: 422 ----GLALNAQSRALLMQKLDRTGIATSIAGSLGVAPAVNGSAVNQQAISLPVVGQPAVP 477
++LN + + LL QKL +A S PA N
Sbjct: 832 LLEDNISLNNEQKILLTQKL--------LAAS---EPATN-------------------- 860
Query: 478 VPAVTAPVIPNMAAEFIGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKH 537
C++++N+ PA E D F+ EI+ ECS +G V+
Sbjct: 861 ---------------------RCMVMRNLGSPA-ELDEYFEEEIK----NECSSFGAVEK 894
Query: 538 IYVDKRSAGF-VYLRFESTEAAASAQRAMHMRWFARRLISA 577
+ + Y+ F + A + R+F+ L+ A
Sbjct: 895 VVITNEGTSVKAYVLFRDAPSCAMCLSKQNGRYFSGYLVKA 935
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 320 IDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 379
I ++Y+GN+HFN+TE + F PFGP++ + L D TG+ +GF F+++ E A A
Sbjct: 601 IQSRIYIGNIHFNLTEADIVAAFSPFGPIKSLSLSKDPATGRSRGFCFIEYTYPEAAINA 660
Query: 380 QSALNGKLEIVGRTLKV 396
+N K I GR +KV
Sbjct: 661 IQNMNQK-TISGRQIKV 676
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 14/205 (6%)
Query: 201 RRYKEKKEVVEPE---ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R+ ++++EVV P+ +P + +F + E + F + G++ VR++ DR+
Sbjct: 225 RKAEDEEEVVAPKKTKVEPT-EGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 283
Query: 258 SRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGG 311
+ RSKG GY+EF + A A L G+ L + + A ++ QS G
Sbjct: 284 TGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRKLNVDFANARSNAAPRDRAQSRAQNFG 343
Query: 312 TATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
P L++GN+ F+ E + + F +G + V+LP D E+G+ KGFG+VQF+
Sbjct: 344 DQRSPE---SDTLFIGNIAFSADENMISETFAEYGSILGVRLPTDPESGRPKGFGYVQFS 400
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKV 396
++ A++A +LNG E+ GR +++
Sbjct: 401 SIDEARSAFESLNGS-ELAGRAMRL 424
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 12/164 (7%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV---KP- 295
F G++ VR++ +R + RS+G GY+E+ D S A A L G+ + + KP
Sbjct: 245 FESFGELSGVRIMTERETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPR 304
Query: 296 ---SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
S+A + Q+ + G T P L+VGNL F + E +R++FE G ++ V+
Sbjct: 305 DANSQAPREKAQTRARSFGDQTSPE---SNTLFVGNLVFGVDENAVREVFEGQGQIQGVR 361
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LP D ETG+ KG+G+V+F+ ++ A+ A + L G +I GR +++
Sbjct: 362 LPTDAETGRPKGYGYVEFSSVDEARQALNELQG-TDIGGRAIRL 404
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK-PSEAE 299
F G+V + R++ D +++SKG G++ F A+A++G + G+ + +E
Sbjct: 232 FQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVAMTGHEIDGRAIRCDFAAEKT 291
Query: 300 KNLVQ------SNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
N V+ ++ + AT LY+G L +++ E + + F FG ++ V L
Sbjct: 292 DNPVERRAQKFNDQRSAPAAT---------LYLGGLSYDLNEDAVYEAFGDFGDIQRVSL 342
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
P D ETG KGFG+V+FA ++ A AA A+NGK E+ GR ++V
Sbjct: 343 PTDRETGAPKGFGYVEFADVDQATAALEAMNGK-ELSGRRIRV 384
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 19/192 (9%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E + FS+ G++ VR++ DR + RS+G GY+E+
Sbjct: 276 PEGAVANLFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADA 335
Query: 276 PMAIALS-GQLLLGQPVMVKPSEAEKNLVQSNTSAG----------GTATGPYGAIDRKL 324
A+ G L G+ + + + Q+NT G T P L
Sbjct: 336 AKAMEAKKGTDLDGRTINLDYAAPR----QANTQGADRSQDRARSYGDQTSPE---SDTL 388
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
+VGNL F+ TE L ++F G V ++LP + ETG+ KGFG+VQF+ ++ AKAA +ALN
Sbjct: 389 FVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEAKAAHAALN 448
Query: 385 GKLEIVGRTLKV 396
G E+ GR +++
Sbjct: 449 GH-ELEGRAIRL 459
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVK 294
F + G++ VR++ DR+S RS+G GY+EF + A A L G+ L +
Sbjct: 279 FEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGR 338
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ A K QS G T P L++GN+ F+ E + + F G + V+LP
Sbjct: 339 SNAAPKERAQSRAQNFGDQTSPE---SDTLFIGNIAFSANENMISEAFAEHGSILGVRLP 395
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
D E+G+ KGFG+VQF+ ++ A++A ALNG ++ GR++++
Sbjct: 396 TDPESGRPKGFGYVQFSSVDEARSAFQALNG-ADLGGRSMRL 436
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 22/192 (11%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
EA + + VF + T + E F G++ R++ DR + +S+G GY++F D
Sbjct: 280 EAAGSTEIKNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDA 339
Query: 273 MSVPMAIALSGQLLLGQPVMV----------KPSEAEKNLVQSNTSAGGTATGPYGAIDR 322
A+ ++G L G+ + V P K SA +
Sbjct: 340 AGAKAALEMAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSA----------PSQ 389
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA--Q 380
++VGNL F T+ + + F FG V V++P D+ETG+ KGF +V+F ++ AK A Q
Sbjct: 390 TVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVDQ 449
Query: 381 SALNGKLEIVGR 392
+ LEI GR
Sbjct: 450 GRSSEGLEIDGR 461
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 11/196 (5%)
Query: 210 VEPEADPERDQR------TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
VE EA P + Q+ T+F ++ + + F G V R+I +R + +S+G
Sbjct: 218 VEEEAAPAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRG 277
Query: 264 VGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQ--SNTSAGGTATGPYGAI 320
GY++F + A+ G+ + G+P+ + S + + SN A P
Sbjct: 278 YGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSAPS 337
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
D L++GNL FN L ++F +G + V++P +T Q KGFG+VQ+ ++ AKAA
Sbjct: 338 D-TLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAAL 396
Query: 381 SALNGKLEIVGRTLKV 396
ALNG+ I GR +++
Sbjct: 397 EALNGEY-IEGRPVRL 411
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R + +S+G GY++F + A+ + G+ + G+P+ + S +
Sbjct: 216 FEHIGGVISARVIMERATGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGK 275
Query: 300 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 359
+ +S A+ L+VGNL FN L +F +G V ++P +T
Sbjct: 276 PHASRSTNDRAKQYGDSQSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDT 335
Query: 360 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
Q KGFG+VQF+ ++ AKAA ALNG+ I GR ++
Sbjct: 336 QQPKGFGYVQFSSVDEAKAALEALNGEY-IEGRPCRL 371
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVK 294
F + G++ VR++ DR+S RS+G GY+EF + A A L G+ L +
Sbjct: 249 FEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGR 308
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ A K QS G T P L++GN+ F+ E + + F G + V+LP
Sbjct: 309 SNAAPKERAQSRAQNFGDQTSPE---SDTLFIGNIAFSANENMISEAFAEHGSILGVRLP 365
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
D E+G+ KGFG+VQF+ ++ A++A ALNG ++ GR++++
Sbjct: 366 TDPESGRPKGFGYVQFSSVDEARSAFQALNG-ADLGGRSMRL 406
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 190/460 (41%), Gaps = 133/460 (28%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIE--FYDVMSVPM--- 277
++ + + +E D+ FS G V+ V L D ++RSKG ++E + D + +
Sbjct: 253 IYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKHM 312
Query: 278 -AIALSG-QLLLGQP---------------VM---------VKPSEAEKN---LVQSN-- 306
L+G QL +G+P VM + PS N L+Q+N
Sbjct: 313 NGFMLAGRQLKVGRPHTPGAGLPGMPGMPGVMMPGLSPFPQLNPSLPVMNPSILLQANAA 372
Query: 307 ------------------------------TSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
T+A TA+ ++YVG++H+++T
Sbjct: 373 IEAQKAAAAAANGSQPTPEMMQEFTKLTGKTAADATAS-------NRIYVGSIHWDLTSD 425
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
++ +FE FG V+ L + ETG+ KG+GFV++ + + A+ A +NG ++ GR +KV
Sbjct: 426 DIKTVFEAFGTVKSCVLMPNPETGKHKGYGFVEYEESKSAEEAIQQMNG-WDLGGRPIKV 484
Query: 397 SSVTDHVGTQDTAAKSADFDDDDGGGLALNAQSRALLMQKLDRTGIATSIAGSLGVAPA- 455
A SA G GL + + ++ G ++G G+ P
Sbjct: 485 GR----------AISSAPILPTPGAGLLNPSGLPSPMLGGFPMPG----MSGMPGLLPGM 530
Query: 456 VNGSAVNQQAISLPVVGQP--------------------------AVPVPAVTAPVIPNM 489
+ G + Q ++ GQP + P ++ +
Sbjct: 531 MPGMPLGQPGLT---PGQPLSSASAIAQAIANKKVEESLSHEENLTLSTPNQRYALMQKL 587
Query: 490 AAEFI--GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKH--IYVDKRS- 544
A I G S C++LK+M P D D E++G++ +E +KYG V+ IY +++S
Sbjct: 588 ARGTITGGKSSRCVVLKDMAGPE-----DVDDELEGEITDEATKYGIVERVVIYQERQSE 642
Query: 545 -AGFV----YLRFESTEAAASAQRAMHMRWFARRLISAIF 579
G V ++ F+S + A A +++ RWF R I A F
Sbjct: 643 KPGDVIIKIFILFQSADQAQKALTSLNGRWFGGRQIKAAF 682
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
++YVG+L+F ++E ++ F PFGPV+ V L D T + KGF FV++A + A AA
Sbjct: 252 RIYVGSLNFELSEEDIKTAFSPFGPVKSVSLTKDPLTQRSKGFAFVEYAYPDAATAALKH 311
Query: 383 LNGKLEIVGRTLKVS 397
+NG + + GR LKV
Sbjct: 312 MNGFM-LAGRQLKVG 325
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV---KP- 295
F + G++ VR++ +R S RS+G GY+E+ D S A A + G+ + + KP
Sbjct: 251 FEEFGELSGVRIMTERESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPR 310
Query: 296 ---SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
++A + Q+ + G T P L+VGNL F + E +R++FE G ++ ++
Sbjct: 311 DANNQAPREKAQNRARSFGDQTSPE---SNTLFVGNLVFGVDENAVREVFEGQGQIQGIR 367
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LP D ETG+ KG+G+V+F+ ++ A+ A + L G +I GR +++
Sbjct: 368 LPTDAETGRPKGYGYVEFSSVDEARQALNDLQG-TDIGGRAIRL 410
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 20/197 (10%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +FA + E + F + G++ R++ DR S RS+G GY+EF +V
Sbjct: 233 PEGASANLFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDA 292
Query: 276 PMA------IALSGQLL------LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
A + L G+ L P E N +S G T P
Sbjct: 293 VKAHAAKKDVELDGRKLNLDFANARANGNANPRERADNRAKSF----GDQTSPE---SDT 345
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L++GN+ F+ E+ +++LF +G ++ ++LP D E+G+ KGFG+VQF+ ++ A+AA A
Sbjct: 346 LFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQFSSVDEARAAMEAE 405
Query: 384 NGKLEIVGRTLKVSSVT 400
+G ++ GR++++ T
Sbjct: 406 HG-ADLGGRSIRLDYST 421
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 26/171 (15%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
F + G++ VR+I DR+S RSKG GY+EF + A+ + LL +
Sbjct: 260 FEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAKNESLLDN----------R 309
Query: 301 NL-VQSNTSAGGTATGPY--------------GAIDRKLYVGNLHFNMTETQLRKLFEPF 345
N+ V +T + GP G ++ GNL F+ TE +R+ F
Sbjct: 310 NIRVDFSTPRDKSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEH 369
Query: 346 GPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G V ++LP D +TG KGFG+V+ +E A+AA +AL G+ ++ GR +++
Sbjct: 370 GNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQ-DVGGRPVRL 419
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
E K+V A PE ++F Q+ + + FS+ G+V + +DRN+ RS+G
Sbjct: 294 EAKKVKLDPATPE--TLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 265 GYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
GY+ F +V A+ ++G + G+ + V S N Q L
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLS-TPPNSNQIRERRAKVFNDEISPPSSTL 410
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
++GNL F++TE L F+ V+ ++LP D ETGQ KGFG+V+ +E AK A A++
Sbjct: 411 FIGNLPFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAIS 469
Query: 385 GKLEIVGRTLKV 396
G+ EI GR ++V
Sbjct: 470 GQ-EIEGRRVRV 480
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 10/162 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVK 294
F + G++ VR++ DR+S RS+G GY+EF + A A L G+ L +
Sbjct: 251 FEEFGELAGVRIVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGR 310
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ A K QS G T P L++GN+ F+ E + + F G + V+LP
Sbjct: 311 SNAAPKERAQSRAQNFGDQTSPE---SDTLFIGNIAFSANENMISEAFAEHGSILGVRLP 367
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
D E+G+ KGFG+VQF+ ++ A++A ALNG ++ GR++++
Sbjct: 368 TDPESGRPKGFGYVQFSSVDEARSAFQALNG-ADLGGRSMRL 408
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ ++ + F G V+ R+I +R S RS+G GY++F D A+
Sbjct: 237 TIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKE 296
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ L G+P+ S ++ + A P D L++GNL FN Q+ +
Sbjct: 297 MHGKELDGRPINCDMSTSKPTVNPREDRAKRFGDMPSEPSDT-LFLGNLSFNADRDQIYE 355
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LF P G V V++P ET Q KGFG+VQ+A ++ A+ A L G
Sbjct: 356 LFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKALETLQG 400
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
E K+V A PE ++F Q+ + + FS+ G+V + +DRN+ RS+G
Sbjct: 294 EAKKVKLDPATPE--TLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 265 GYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
GY+ F +V A+ ++G + G+ + V S N Q L
Sbjct: 352 GYVHFSTADAVEKALKMNGYEIDGRAIKVDLS-TPPNSNQIRERRAKVFNDEISPPSSTL 410
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
++GNL F++TE L F+ V+ ++LP D ETGQ KGFG+V+ +E AK A A++
Sbjct: 411 FIGNLPFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAIS 469
Query: 385 GKLEIVGRTLKV 396
G+ EI GR ++V
Sbjct: 470 GQ-EIEGRRVRV 480
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAE 299
F + G++ VR+ +DR S RS+G G+I+F +V A+ + G+ + G+ + V +E+
Sbjct: 308 FEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESN 367
Query: 300 KNLVQSNTSA-GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
Q+ + G T + P + ++VGN+ F+ E L + F +G V V+LP D E
Sbjct: 368 PRNTQARAAKFGDTPSEP----SQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRE 423
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
TGQ KGF +V+F A AA A LEI GR +++
Sbjct: 424 TGQPKGFAYVEFEDQAGATAAFEAGKEGLEIGGRPVRL 461
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 12/189 (6%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM-S 274
PE +F + E + F + G++ R++ DR S RS+G GY+EF +V +
Sbjct: 233 PEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVEDA 292
Query: 275 VPMAIALSGQLLLGQPVMVKPSEAEKNL-------VQSNTSAGGTATGPYGAIDRKLYVG 327
V A L G+ + + + A N + + G T P L++G
Sbjct: 293 VKAHTAKKDAELDGRKMNLDYANARTNGNANPRERADNRAKSFGDQTSPE---SDTLFIG 349
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
N+ F+ E +++LF +G ++ ++LP D E+G+ KGFG+VQF+ ++ A+AA A +G
Sbjct: 350 NISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAEHG-A 408
Query: 388 EIVGRTLKV 396
++ GR++++
Sbjct: 409 DLGGRSIRL 417
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
+K +V EP A E + +F M E + F G++ R+I DR + R+KG
Sbjct: 203 KKSKVEEPAA--EEGIKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGF 260
Query: 265 GYIEFYDVMSVPMA------IALSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATG 315
GY+EF + A L G+ L P KP + GG
Sbjct: 261 GYVEFSNAADAAKAQKEMHEYELDGRQLNVDFSTP-RAKPD-----------ANGGARAN 308
Query: 316 PYG----AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
YG L++GN+ F + ++++F +G + V LP D +TG KGFG+V F+
Sbjct: 309 KYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFS 368
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
+ A AA ALNG+ +I GR +++ T
Sbjct: 369 SQQEATAALEALNGQ-DIGGRAIRIDYAT 396
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS-GQLLLGQPVMVKPSEAE 299
F + G++ VRL+ DR + RSKG GY+EF D A A G L G+P+ V + A
Sbjct: 277 FEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAYAAKQGAELDGRPLNVDFANAR 336
Query: 300 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 359
N + + + G L++GNL F+ T+ + + F P G V ++LP D ET
Sbjct: 337 SNDNKPADNRRKSYGDQLGEPTDTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRET 396
Query: 360 GQCKGFGFVQFAQLEHAKAAQSALNG 385
G KGFG+V F ++ AKAA A+ G
Sbjct: 397 GAPKGFGYVTFGSVDEAKAALEAMQG 422
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMV---KPS 296
F G++ R+I DR S RSKG GY+EF A A + L G+ + V P
Sbjct: 218 FEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEMHEYELDGRGLNVDFSTPR 277
Query: 297 EAEKNLVQSNTSAGGTATGPYG----AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
E ++N YG A L++GNL F+ + ++++F+ +G + V
Sbjct: 278 EKPDQSARANK---------YGDKRSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVS 328
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LP D +TG KGFG+V F +E A AA ALNG+ E+ GR +++
Sbjct: 329 LPTDRDTGSLKGFGYVDFGTVEEATAALEALNGQ-EVEGRAIRI 371
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R + +S+G GY++F + A+ + G+ + G+P+ + S +
Sbjct: 188 FEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGK 247
Query: 300 KNLVQSNT----SAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+ +SN G + + P L++GNL FN L +F +G V ++P
Sbjct: 248 PHASKSNNDRAKQYGDSQSPP----SDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPT 303
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+T Q KGFG+VQF+ ++ AKAA A+NG+ I GR ++
Sbjct: 304 HPDTQQPKGFGYVQFSSVDEAKAALEAMNGEY-IEGRPCRL 343
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 10/161 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R + +S+G GY++F + A+ + G+ + G+P+ + S +
Sbjct: 188 FEHIGGVIGARVIMERATGKSRGYGYVDFESKSAAEKALEEMQGKEIDGRPINLDMSTGK 247
Query: 300 KNLVQSNT----SAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+ +SN G + + P L++GNL FN L +F +G V ++P
Sbjct: 248 PHASKSNNDRAKQYGDSQSPP----SDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPT 303
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+T Q KGFG+VQF+ ++ AKAA A+NG+ I GR ++
Sbjct: 304 HPDTQQPKGFGYVQFSSVDEAKAALEAMNGEY-IEGRPCRL 343
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 261 RHARRVYVGGLPPTANEQSVATFFSQVMAKIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 320
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N A G G
Sbjct: 321 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLTPGSA 377
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G +D +++VG L + TETQ+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 378 GGLDGPDRVFVGGLPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 437
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 438 TDIACAALNG-IKMGDKTLTV 457
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 41 YRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERH-RRDRDRDRDRGR 99
Y +R + EEEE + + + S D K RH RD DRD R R
Sbjct: 4 YEERYEGNGEEEE------LHNSHHQPHPDSSPLPTHDDLTDSKSRHGSRDYDRDSSRSR 57
Query: 100 ERERETERDRERSRERREKEKERERRERRDREKE 133
++ERE RDRER +REK ++RER + RDR+ E
Sbjct: 58 DKEREKGRDRER---KREKGRDREREKSRDRDSE 88
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 104/155 (67%), Gaps = 12/155 (7%)
Query: 58 SGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERRE 117
SGK +D+D + ++R++ RD+D+ERHR D+DRD+D R++E E +RD++R R+ +E
Sbjct: 1112 SGKSRHKDKDRD----KEREKPRDKDRERHR-DKDRDKDSHRDKEHERKRDKDRDRQ-KE 1165
Query: 118 KEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR-SRRERERESEREREL 176
K+K+RER R+DRE E +E+D ERR S + RR R R+ERE+ES +E++
Sbjct: 1166 KDKDRER--RKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKD- 1222
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVE 211
E++R + RE +E++RD E +E R +++ KE E
Sbjct: 1223 RGEKDRSKHRE-KEKDRDREKKE-RSHRDNKESAE 1255
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 99/164 (60%), Gaps = 13/164 (7%)
Query: 43 KREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRER 101
+ +D + ++E EK R R R RD+D + S RD++ +R RDK+R R+ +++D+DR R +
Sbjct: 1116 RHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQ-KEKDKDRERRK 1174
Query: 102 ERETERDRERSRERR-----EKEKERERRE-----RRDREKERERERD-GERRSSSRSRR 150
+RE E +E+ RERR + K+++RRE R++REKE +E+D GE+ S +
Sbjct: 1175 DREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREK 1234
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERD 194
+ R RS R+ + +ER + ER R+R+ + RERE++
Sbjct: 1235 EKDRDREKKERSHRDNKESAERTDSGKKERHRDRDEKKREREKE 1278
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 23/202 (11%)
Query: 14 EEQRQQKQDDDSSSKKKAKREEKSERS--YRKREDSEEEEEEEKSRSGKRSRRDEDEENG 71
+++R++ +D D + R++ S R + ++ D + + ++EK + +R R+D + E+
Sbjct: 1123 DKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKDRER-RKDREGESS 1181
Query: 72 SRRDR----DRDRDRDKERHRRDRDRDRDRGRERERETERDR---ERSRER-REKEKERE 123
+DR DR++D K++ RR++DRD + RE+E E+DR +RS+ R +EK+++RE
Sbjct: 1182 KEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDRE 1241
Query: 124 RRERRDRE------------KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
++ER R+ KER R+RD ++R + S + S+ R++ RE +
Sbjct: 1242 KKERSHRDNKESAERTDSGKKERHRDRDEKKREREKESGSRDGDKSSTKDGDRDKRREEK 1301
Query: 172 RERELELERERERERELRERER 193
R R+ + ER +E+E +RER
Sbjct: 1302 RHRDKDRERRKEKESNDSDRER 1323
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 115/204 (56%), Gaps = 18/204 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEE 69
+K ++ R++++D + S K+ RE + +R +++ S++++ EK R G++ R E +
Sbjct: 1163 QKEKDKDRERRKDREGESSKEKDRERRKDR---EKDSSKDKDRREKDRDGRKEREKESSK 1219
Query: 70 NGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD 129
R ++DR + R+KE+ DR RE++ + RD + S ER + K+ R+R +
Sbjct: 1220 EKDRGEKDRSKHREKEK---------DRDREKKERSHRDNKESAERTDSGKKERHRDRDE 1270
Query: 130 REKERERE---RDGERRSSS---RSRRSSSQSRRSSSRSRRERERESERERELELERERE 183
+++ERE+E RDG++ S+ R +R + R R RR+ + ++ +RE R+++
Sbjct: 1271 KKREREKESGSRDGDKSSTKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHRDKD 1330
Query: 184 RERELRERERDLEMRESRRYKEKK 207
+ R+RE+ E + + +KE+K
Sbjct: 1331 GSADRRKREKSGERKHRKEHKEEK 1354
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 15/169 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
E + E+ R +K K+K + EK ERS+R + +E E++ SGK+ R RD DE
Sbjct: 1216 ESSKEKDRGEKDRSKHREKEKDRDREKKERSHR-----DNKESAERTDSGKKERHRDRDE 1270
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ R RD DK +D DRD+ RE +R ++DRER +E+ + +RERR+ R
Sbjct: 1271 KKREREKESGSRDGDKSS---TKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKHR 1327
Query: 129 DREKE---RERERDGERRSSSRSRRSSSQSR---RSSSRSRRERERESE 171
D++ R+RE+ GER+ + +S+ ++ R E++RE E
Sbjct: 1328 DKDGSADRRKREKSGERKHRKEHKEEKGRSKSEHKNGQDERHEKKREDE 1376
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 102/175 (58%), Gaps = 7/175 (4%)
Query: 16 QRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEENGSRR 74
+R++ ++ DSS K + +++ R R++E S+E++ EK RS R + +D D E R
Sbjct: 1187 ERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDREKKERS 1246
Query: 75 DRDRDRDRDK-ERHRRDRDRDRD-RGRERERET-ERDRERSRERREKEKERERRERRDRE 131
RD ++ + +++R RDRD + RERE+E+ RD ++S ++ ++++ R E+R R+
Sbjct: 1247 HRDNKESAERTDSGKKERHRDRDEKKREREKESGSRDGDKS-STKDGDRDKRREEKRHRD 1305
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERER 186
K+RER ++ E S R RR + S RR+RE+ ER+ E + E+ R +
Sbjct: 1306 KDRERRKEKESNDSDRERRKHRD--KDGSADRRKREKSGERKHRKEHKEEKGRSK 1358
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 181 ERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEF 240
E ++R+ E D ++S+ E+ A E + T+F ++ + + +
Sbjct: 220 ENPKKRKNEEVVADETSKKSKTEAEETAAPTSPAVAEEEGATLFVGRLSWNIDDDWLKKE 279
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEF-YDVMSVPMAIALSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R + +S+G GY++F + + G+ + G+P+ + S +
Sbjct: 280 FEHLGDVIGARVIMERATGKSRGYGYVDFKTKAAAEKALAEMQGKEIDGRPINLDMSTGK 339
Query: 300 KNLVQSNTS-----AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ ++N G + + P L++GNL FN L ++F +G V ++P
Sbjct: 340 PHASKANAGDRARQFGDSQSPP----SDTLFIGNLSFNANRDSLFEIFGEYGTVISCRVP 395
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+T Q KGFG+VQF+ ++ AKAA ALNG
Sbjct: 396 THPDTQQPKGFGYVQFSSVDEAKAALEALNG 426
>gi|307109347|gb|EFN57585.1| hypothetical protein CHLNCDRAFT_143267 [Chlorella variabilis]
Length = 521
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
RT+F +P A E + EFF++ G + +VR+ DR++ R+KG +++F ++ A A
Sbjct: 259 RTIFMKNLPWAAEEDTIREFFAECGPIAEVRIAYDRDTGRAKGFAHVQFEELEGAAKATA 318
Query: 281 LSGQLLLGQPVMVK-PSEAEKNLVQSN---TSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
LSG+ L+ + + ++ +E ++ N TS G T I K Y +L +
Sbjct: 319 LSGESLMDRELYIESTTERQQRTPGENRFATSDGTT-------IFVKGYDSSLGEDEVRR 371
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
QL + F G V V+LP D +TG+ KG GF++F + AK L+G E+ G +KV
Sbjct: 372 QLTEAFGEVGAVVSVRLPTDRDTGELKGIGFIEFESTD-AKHKAVELDGS-EVAGGWIKV 429
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 219 DQRTVF--AYQMPLKATE--RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
D T+F Y L E R + E F + G V VRL DR++ KG+G+IEF +
Sbjct: 351 DGTTIFVKGYDSSLGEDEVRRQLTEAFGEVGAVVSVRLPTDRDTGELKGIGFIEFESTDA 410
Query: 275 VPMAIALSGQLLLGQPVMVKPS 296
A+ L G + G + V P+
Sbjct: 411 KHKAVELDGSEVAGGWIKVDPN 432
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + + F G V R+I +R + RS+G GY++F + AI
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ + G+P+ S ++ +N A P D L++GNL FN + +
Sbjct: 202 MQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFGDTPSEPSDT-LFLGNLSFNADRDTIFE 260
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LF G V V++P ET Q KGFG+VQF+ LE +K A +L G
Sbjct: 261 LFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQG 305
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+F + + +Y+ FS+ + R+I DR RS+G GY++F D S A+ A
Sbjct: 227 TLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGYVDFSDAESAKAALEA 286
Query: 281 LSGQLLLGQPVMV-----KPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNM 333
+G L G+ + + +P ++ ++N A G + P L+VGN+ F M
Sbjct: 287 KNGTELEGRNMNIDFSGKRPERSDNPGDRANDRAQRHGDSLSPE---SDTLFVGNISFEM 343
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
+ + F V+LP D E+G KGFG+V F+ ++ AK A S LNG+
Sbjct: 344 DQDTVHAFFATVAEPTSVRLPTDPESGNLKGFGYVSFSSIDDAKKALSELNGQ 396
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 186 RELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAG 245
++ R E D EP T+F ++ + + F G
Sbjct: 164 KKARTDETD----------------EPA--------TLFVGRLSWNIDDEWLKREFEHIG 199
Query: 246 KVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQ 304
V R+IM+R++ +S+G GY++F + S A+ + G+ + G+P+ + S + + +
Sbjct: 200 GVIGARVIMERSTGKSRGYGYVDFDNKDSAEKALVEMQGKEIDGRPINLDMSTGKPHASK 259
Query: 305 SNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQ 361
SN A G T + P L++GNL FN L ++F G V ++P +T Q
Sbjct: 260 SNDRAKQFGDTPSAP----SDTLFIGNLSFNAQRDNLFEIFGQHGTVISCRIPTHPDTQQ 315
Query: 362 CKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
KGFG+VQF+ ++ AKAA ALNG+ I GR ++
Sbjct: 316 PKGFGYVQFSSVDEAKAALEALNGEY-IEGRACRL 349
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA---- 278
+F + E + F + G++ VR++ DR+S RS+G GY+EF + A
Sbjct: 263 LFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAK 322
Query: 279 --IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+ L G+ L + + A + QS G P L++GN+ F+ E
Sbjct: 323 KDVELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQASPE---SDTLFIGNISFSADEN 379
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+ + F G + V+LP D E+G+ KGFG+VQF+ ++ A++A LNG ++ GR +++
Sbjct: 380 MISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGA-DLGGRPMRL 438
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 187 ELRERERDLEMRESRRY---KEKKEV----VEPEADPERDQRTVFAYQMPLKATERDVYE 239
EL R+ +++ +R +E+ + +A PE D T+F + A E + E
Sbjct: 326 ELDGRKLNIDFANARSNAAPRERAQSRAQNFGDQASPESD--TLFIGNISFSADENMISE 383
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPV 291
FS+ G + VRL D S R KG GY++F V A L+G L G+P+
Sbjct: 384 AFSEHGSILGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPM 436
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + + F G V R+I +R + RS+G GY++F + AI
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ + G+P+ S ++ +N A P D L++GNL FN + +
Sbjct: 202 MQGKEIDGRPINCDLSTSKPAGNNTNDRAKKFGDTPSEPSDT-LFLGNLSFNADRDTIFE 260
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LF G V V++P ET Q KGFG+VQF+ LE +K A +L G
Sbjct: 261 LFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQG 305
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 12/167 (7%)
Query: 235 RDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
R+ EF KA VR++ DR + RSKG GY+EF V + A+ A G L +P+ +
Sbjct: 285 REFEEFGPKA-----VRIVTDRATGRSKGFGYVEFETVEAATAALNAKKGTDLDNRPLNL 339
Query: 294 KPS----EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
S E + ++++ A P D L+VGNL F+ T + ++F+ +G +
Sbjct: 340 DFSTPRPEGQNPRDRASSRASQHGDVPSRPSDT-LFVGNLSFDATPDSVTEIFQEYGTIT 398
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
V LP E G KGFG+V F+ +E A+ A AL G E+ GR++++
Sbjct: 399 RVSLPTKPEDGMPKGFGYVGFSSVEEAQGAFEALQG-AELNGRSMRL 444
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E + F + G++ R++ DR S RS+G GY+EF +V
Sbjct: 233 PEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDA 292
Query: 276 PMAIA------LSGQLL------LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
A L G+ + P E N +S G T P
Sbjct: 293 VKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSF----GDQTSPE---SDT 345
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L++GN+ F+ E +++LF +G ++ ++LP D ++G+ KGFG+VQF+ ++ A+AA A
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAE 405
Query: 384 NGKLEIVGRTLKV 396
NG ++ GR++++
Sbjct: 406 NG-ADLGGRSIRL 417
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 211 EPEADPERDQRT----------VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
EP A P++ ++T +F + E + + F G++ VR++ DR+S R
Sbjct: 282 EPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGR 341
Query: 261 SKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVKPSEAEKNL--VQSNTSAGGT 312
S+G GY+E+ + A + G+ + +P+ N Q+ G
Sbjct: 342 SRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGD 401
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
T P L+VGN+ F+ E + +LF G + ++LP D E+G+ KGFG+VQF+
Sbjct: 402 QTSPE---SDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSS 458
Query: 373 LEHAKAAQSALNGKLEIVGRTLKV 396
++ A+ A + LNG E+ GR +++
Sbjct: 459 VDEARQAFNDLNG-AELNGRPVRL 481
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 22/204 (10%)
Query: 211 EPEADPERDQRT----------VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
EP A P++ ++T +F + E + + F G++ VR++ DR+S R
Sbjct: 282 EPAAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGR 341
Query: 261 SKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVKPSEAEKNL--VQSNTSAGGT 312
S+G GY+E+ + A + G+ + +P+ N Q+ G
Sbjct: 342 SRGFGYVEYVNAADAAKAYNAKKDTEIDGRKINLDYATGRPANNNNNQDRAQARARNFGD 401
Query: 313 ATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQ 372
T P L+VGN+ F+ E + +LF G + ++LP D E+G+ KGFG+VQF+
Sbjct: 402 QTSPE---SDTLFVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSS 458
Query: 373 LEHAKAAQSALNGKLEIVGRTLKV 396
++ A+ A + LNG E+ GR +++
Sbjct: 459 VDEARQAFNDLNG-AELNGRPVRL 481
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + F G V R+I +R + RS+G GY++F D AI
Sbjct: 212 TIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAIKE 271
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ + G+P+ V S ++ A P D L++GNL FN + +
Sbjct: 272 MQGKEIDGRPINVDMSTSKPASNPKEDRAKKFGDVPSQPSD-TLFLGNLSFNADRDNIFE 330
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LF+ +G + V++P ET Q KGFG+VQ+A +E A+ A L G
Sbjct: 331 LFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQG 375
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T++ + ++ +YE F + R++ D++SRRS+G GY++F + A
Sbjct: 306 TLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPDAAEKAYNE 365
Query: 281 LSGQLLLGQPVMV----KPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+G L G+ + + KP+E ++ A G P L+VGNL FN T
Sbjct: 366 KNGAHLQGREMRLDFASKPAEGNDPTTRAAERARKHGDVISPE---SDTLFVGNLSFNAT 422
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
E + + F V+ +++P D E+G+ KGF +V F +E AK A + LNG
Sbjct: 423 EESVSEFFNSVAAVQSLRIPTDQESGRPKGFAYVTFNSVEDAKTAFNQLNG 473
>gi|408399266|gb|EKJ78389.1| hypothetical protein FPSE_01494 [Fusarium pseudograminearum CS3096]
Length = 498
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+FA + + +YE F + + R++ ++ + RS+G GY++F D S A
Sbjct: 236 TLFAGSLSWSIDDNALYEAFKHIEGLANARVMTEKGTGRSRGFGYVDFNDAASCTKAYET 295
Query: 281 LSGQLLLGQPVMVKPSEA------EKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
++G L G+ + + + A G P L+VGNL F++
Sbjct: 296 MNGTELEGRAINLDYANARPAEANPAARAADRAQRHGDTVSPE---SDTLFVGNLPFDVD 352
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+ +R FE V V+LP D ++G KGFG+V F+ +E AK A NG
Sbjct: 353 QDSVRAFFEEVAAVASVRLPTDPDSGNLKGFGYVSFSSVEEAKQVFEAKNG 403
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F + + + E F G+V R+I DR + RSKG GY++F A A
Sbjct: 254 TLFVGSLSWNVDDDMLKEEFKFCGEVVSARVITDRETGRSKGFGYVDFASPADAEKAHAE 313
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAG-----GTATGPYGAIDRKLYVGNLHFNMTE 335
G + G+ + V S + N +N SA G T P L+VGNL F+ E
Sbjct: 314 KQGAFIDGRQIKVDFSTGKSN---NNDSADRAKKFGDVTSPESDT---LFVGNLPFDADE 367
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+ + F ++ ++LP D E+G+ KGFG+V F +E AK+A + L+G+ I GR +
Sbjct: 368 DVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVEDAKSAFTQLSGQ-SINGRPCR 426
Query: 396 V 396
+
Sbjct: 427 L 427
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 6/158 (3%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL-GQPVMVKPSEAE 299
F G++ R+I DR + R+KG GY+EF A + L G+P+ V S
Sbjct: 255 FESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPR 314
Query: 300 KNLVQSNTSAGGTATGPY-GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
+ + + +A G A L++GNL F+ T ++++F +G V V LP D +
Sbjct: 315 Q---KPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRD 371
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+G KGFG+V F E A AA AL+G+ ++ GR L+V
Sbjct: 372 SGALKGFGYVDFGSQEEATAALEALHGQ-DVAGRPLRV 408
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
+F + E + F + G++ VR++ +R++ RS+G GY+E+ + + A
Sbjct: 196 NLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEA 255
Query: 281 -----LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDR-KLYVGNLHFNMT 334
+ G+ + +P+ E+ Q A + G + + L+VGN+ F+
Sbjct: 256 KRDTEIDGRKINLDYATGRPANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSAN 315
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E L ++F G + ++LP D E+G+ KGFG+VQF+ +E A+ A + LNG EI GR +
Sbjct: 316 EDSLHEVFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNG-AEIDGRPV 374
Query: 395 KVSSVT 400
++ T
Sbjct: 375 RLDFST 380
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 180 RERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYE 239
R RE + + R R + + PE+D T+F +P A E ++E
Sbjct: 274 RPANRE------QGGFQDRAQARARSFGDQASPESD------TLFVGNIPFSANEDSLHE 321
Query: 240 FFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPV 291
F + G + +RL D S R KG GY++F V A L+G + G+PV
Sbjct: 322 VFGQKGSILGIRLPTDPESGRPKGFGYVQFSSVEEAREAFNELNGAEIDGRPV 374
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA------LSGQLLLGQPVMVK 294
F + G++ VR++ +R++ RS+G GY+E+ + + A + G+ + +
Sbjct: 300 FEEFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGR 359
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDR-KLYVGNLHFNMTETQLRKLFEPFGPVELVQL 353
P+ E+ Q A + G + + L+VGN+ F+ E L ++F G + ++L
Sbjct: 360 PANREQGGFQDRAQARARSFGDQASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRL 419
Query: 354 PLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
P D E+G+ KGFG+VQF+ +E A+ A + LNG EI GR +++
Sbjct: 420 PTDPESGRPKGFGYVQFSSVEEAREAFNELNG-AEIDGRPVRL 461
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA------IALSGQLLLGQPVMVK 294
F + G++ VR++ DR+S RS+G GY+EF D A + L G+ L +
Sbjct: 279 FEEFGELSGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAKKDVELDGRKLNIDFANAR 338
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ A + QS G P L++GN+ F+ E + + F G + V+LP
Sbjct: 339 SNAAPRERAQSRAQNFGDQASPE---SDTLFIGNISFSADENMISEAFSEHGSILGVRLP 395
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
D E+G+ KGFG+VQF+ ++ A++A LNG ++ GR +++
Sbjct: 396 TDPESGRPKGFGYVQFSSVDEARSAFQTLNGA-DLGGRPMRL 436
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
+A PE D T+F + A E + E FS+ G + VRL D S R KG GY++F V
Sbjct: 357 QASPESD--TLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYVQFSSV 414
Query: 273 MSVPMAI-ALSGQLLLGQPV 291
A L+G L G+P+
Sbjct: 415 DEARSAFQTLNGADLGGRPM 434
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL-GQPVMVKPSEAE 299
F G++ R+I DR + R+KG GY+EF A + L G+P+ V S
Sbjct: 268 FESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPR 327
Query: 300 KNLVQSNTSAGGTATGPY-GAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIE 358
+ + + +A G A L++GNL F+ T ++++F +G V V LP D +
Sbjct: 328 Q---KPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRD 384
Query: 359 TGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+G KGFG+V F E A AA AL G+ ++ GR L+V
Sbjct: 385 SGALKGFGYVDFGSQEEATAALEALQGQ-DVAGRPLRV 421
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPM 277
R R V+ + A E+ V FFS+ +M + G G V
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQ---------VMATIGGNTAGPGDAVMRSVEEASN 337
Query: 278 AIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPYGAIDR- 322
A+AL G + G PV V+ PS+ NL N G + G G +D
Sbjct: 338 AMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSAGGLDGP 394
Query: 323 -KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+++VG + + TETQ+R+L E FGP+ L D ETG KG+ F + L A +
Sbjct: 395 DRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAVTDIACA 454
Query: 382 ALNGKLEIVGRTLKV 396
ALNG +++ +TL V
Sbjct: 455 ALNG-IKMGDKTLTV 468
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 12/189 (6%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM-S 274
P+ +FA + E + F + G++ R++ DR S RS+G GY+EF +V +
Sbjct: 228 PDGASANLFAGNLSWNVDEEWLRSEFEEFGELVGARIVTDRESGRSRGFGYVEFANVEDA 287
Query: 275 VPMAIALSGQLLLGQPVMVKPSEAEKNL-------VQSNTSAGGTATGPYGAIDRKLYVG 327
V A L G+ + + + A N S + G T P L++G
Sbjct: 288 VKAHAAKKDAELDGRKLNLDFANARTNAGGNPRERADSRAKSFGDQTSPE---SDTLFLG 344
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
NL F+ E +++LF G + ++LP D ++G+ KGFG+VQF+ ++ A+AA A G
Sbjct: 345 NLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAEYG-A 403
Query: 388 EIVGRTLKV 396
++ GR +++
Sbjct: 404 DLGGRAIRI 412
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + F G V R+IM+R + RS+G GY++F + A+
Sbjct: 257 TIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKAVKE 316
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ + G+P+ S ++ N A P D L++GNL FN + +
Sbjct: 317 MHGKEIDGRPINCDMSTSKPAGNPRNDRAKQFGDTPSQPSDT-LFLGNLSFNADRDNIFE 375
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
F G V V+LP ET Q KGFG+VQ++ ++ A+ A AL G
Sbjct: 376 TFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAFEALQG 420
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
++VG L +++ + L+ FEP G V ++ ++ T + +G+G+V F +A+ A +
Sbjct: 258 IFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKAVKEM 317
Query: 384 NGKLEIVGRTLKVSSVT 400
+GK EI GR + T
Sbjct: 318 HGK-EIDGRPINCDMST 333
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ + A E+ V FFS+ +++ K ++E
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 346
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N G + G
Sbjct: 347 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 403
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 404 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 463
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 464 TDIACAALNG-IKMGDKTLTV 483
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ + A E+ V FFS+ +++ K ++E
Sbjct: 285 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 344
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N G + G
Sbjct: 345 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 401
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 402 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 461
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 462 TDIACAALNG-IKMGDKTLTV 481
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ + A E+ V FFS+ +++ K ++E
Sbjct: 287 RHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDAVVNVYINHDKKFAFVEMRS 346
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N G + G
Sbjct: 347 VEEASNAMALDGIIFEGAPVKVRRPTDYNPSLAAALGPSQPNPNL---NLGLVGLSPGSA 403
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G +D +++VG + + TETQ+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 404 GGLDGPDRIFVGGVPYYFTETQIRELLETFGPLRGFDLVKDRETGNSKGYAFCVYQDLAV 463
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 464 TDIACAALNG-IKMGDKTLTV 483
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 25/150 (16%)
Query: 5 EYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRR 64
EYE+ + EE++ Q+QD+D + + EE+ + K+ G R
Sbjct: 3 EYEFED---EERKFQQQDEDHTHNDSSPPPPPPPPPV-----DEEDLTDSKTNLGSR--- 51
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR-----------DRDRDRGRERERETERDRERSR 113
D D E+ R+++R+ R+KER R ++ RDR ER R +R+ ERSR
Sbjct: 52 DNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSR--DRESERSR 109
Query: 114 ER-REKEKERERRERRDREKERERERDGER 142
+R R++E+ R+R ++ K+RER+RDGE+
Sbjct: 110 DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 10/187 (5%)
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
+ +F + + +Y F + G++ R+I DR S RSKG GY+EF + A+
Sbjct: 191 SKNLFVGNLSWNIDDEWLYREFEEFGEITGARVISDRESGRSKGFGYVEFANSADAAAAL 250
Query: 280 ALSGQLLL-GQPVMVKPSE-----AEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNM 333
L+ G+ V S A K+ + G A P L+VGN+ F
Sbjct: 251 KAKKGALIDGREANVDFSTPRDNAAPKDRANARAQTYGDAKNPE---SDTLFVGNISFEA 307
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
E L + F G V V+LP D+++G KGFG++ F+ +E AK A + G ++ GR
Sbjct: 308 NEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSSVEDAKNAMENMMG-ADVGGRP 366
Query: 394 LKVSSVT 400
+++ T
Sbjct: 367 VRLDYAT 373
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
+PE D T+F + +A E + E F G V +VRL D +S KG GYI F V
Sbjct: 292 NPESD--TLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSSVED 349
Query: 275 VPMAI-ALSGQLLLGQPV 291
A+ + G + G+PV
Sbjct: 350 AKNAMENMMGADVGGRPV 367
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E + F + G++ R++ DR S RS+G GY+EF +V
Sbjct: 233 PEGASANLFVGNLSWNVDEEWLRSEFEEFGELSGTRIVTDRESGRSRGFGYVEFVNVEDA 292
Query: 276 PMAIA------LSGQLL------LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
A L G+ + P E N +S G T P
Sbjct: 293 VKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNRAKSF----GDQTSPE---SDT 345
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L++GN+ F+ E +++LF +G ++ ++LP D ++G+ KGFG+VQF+ ++ A+AA A
Sbjct: 346 LFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQFSSVDEARAALEAE 405
Query: 384 NGKLEIVGRTLKV 396
+G ++ GR++++
Sbjct: 406 HG-ADLGGRSIRL 417
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 205 EKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGV 264
+K +V EP A E + +F M E + F G++ R+I DR + R+KG
Sbjct: 207 KKSKVEEPAA--EEGVKNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGF 264
Query: 265 GYIEFYDVMSVPMA------IALSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATG 315
GY+EF + A L G+ L P KP + GG
Sbjct: 265 GYVEFANAADAAKAQKEMHEYELDGRQLNVDFSTP-RAKPD-----------ANGGARAN 312
Query: 316 PYG----AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
YG L++GN+ F + ++++F +G + V LP D +TG KGFG+V F+
Sbjct: 313 KYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFS 372
Query: 372 QLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
+ A AA ALNG+ +I GR +++ T
Sbjct: 373 SQQEATAALEALNGQ-DIGGRAIRIDYAT 400
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 91/201 (45%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 252 RHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 311
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G +L G PV V+ PS+ NL N +A G ++G
Sbjct: 312 VEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLAAVGLSSGST 368
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F +
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 429 TDIACAALNG-IKMGDKTLTV 448
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSR 113
+SR D E S + ++DRD+D E+ DRDR++ R R+RE+ +RDRERS+
Sbjct: 42 KSRESHDLEKDSSKISEKDRDKDPEK---DRDREKSRDRDREKSRDRDRERSK 91
>gi|327305337|ref|XP_003237360.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326460358|gb|EGD85811.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 422
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 216 PERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSV 275
PE +F + E + F + G++ R++ DR S RS+G GY+EF +V
Sbjct: 232 PEGASANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVEDA 291
Query: 276 PMAIALSGQLLLGQPVM------------VKPSEAEKNLVQSNTSAGGTATGPYGAIDRK 323
A A + L M P E N +S G T P
Sbjct: 292 VKAHAAKKDVELDGRKMNLDYANARANGNANPRERADNRAKSF----GDQTSPE---SDT 344
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAA 379
L++GN+ F+ E +++LF +G ++ ++LP D E+G+ KGFG+VQF+ ++ A+AA
Sbjct: 345 LFIGNISFSADENMVQELFSKYGMIQGIRLPTDPESGRPKGFGYVQFSSVDEARAA 400
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 316 PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
P GA L+VGNL +N+ E LR FE FG + ++ D E+G+ +GFG+V+F +E
Sbjct: 232 PEGA-SANLFVGNLSWNVDEEWLRSEFEEFGELAGTRIVTDRESGRSRGFGYVEFVNVED 290
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A A +A +E+ GR + +
Sbjct: 291 AVKAHAA-KKDVELDGRKMNL 310
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 213 EADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDV 272
+ PE D T+F + A E V E FSK G ++ +RL D S R KG GY++F V
Sbjct: 337 QTSPESD--TLFIGNISFSADENMVQELFSKYGMIQGIRLPTDPESGRPKGFGYVQFSSV 394
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 12/164 (7%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLL-GQPVMV---KP- 295
F G++ VR++ +R + RS+G GY+E+ D S A L G+ + + KP
Sbjct: 244 FESFGELSGVRIMTERETGRSRGFGYVEYADAASAKAAYEAKKDTELDGRTINLDYAKPR 303
Query: 296 ---SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQ 352
++A + Q+ + G T P L++GNL F + E +R++FE G ++ ++
Sbjct: 304 DANAQAPREKAQTRARSFGDQTSPE---SNTLFLGNLVFGVDENAVREVFESQGTIQGIR 360
Query: 353 LPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
LP D ETG+ KG+G+V+F+ ++ A+ A + L G +I GR +++
Sbjct: 361 LPTDPETGRPKGYGYVEFSSVDEARQALNDLQG-TDIGGRAIRL 403
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + F G V R+I ++ + RS+G GY++F + AI
Sbjct: 162 TIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRSRGYGYVDFKNKTFAEKAIKE 221
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI----DRKLYVGNLHFNMTET 336
+ G+ + G+P+ S ++ S GG +G L++GNL F+
Sbjct: 222 MQGKEIDGRPINCDMSTSKP------ASNGGDRAKKFGDTPSEPSETLFLGNLSFDADRD 275
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+ ++F +G + V++P ET Q KGFG+VQ+ +E AK A AL G
Sbjct: 276 NIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALDALQG 324
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK-----AGKVRDV-RLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FF++ G + +++ K ++E
Sbjct: 269 RHARRVYVGGLPPIANEQTVAVFFNQVMAAIGGNTFALGHAVVNVYINHDKKFAFVEMRS 328
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N +A G G
Sbjct: 329 VEEASNAMALDGIMFEGAPVKVRRPTDYNPSQAAALGPSQPNPNL---NLAAVGLTPGAG 385
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE Q+R+L E FGP+ + D ETG KG+ F +
Sbjct: 386 GGLEGPDRIFVGGLPYYFTEAQVRELLETFGPLRGFDIVKDKETGNSKGYAFCLYKDGTV 445
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ RTL V
Sbjct: 446 TDIACAALNG-IQLGDRTLTV 465
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
E+ T+FA + + + E F + R++ DR+ RS+G GY++F +
Sbjct: 263 EQAASTLFAGNLSWNIDDNTLSEAFKGFEGLVGARVVTDRDGGRSRGFGYVDFETAEAAT 322
Query: 277 MAI-ALSGQLLLGQPVMV-----KPSEAE-KNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
A A+ G L +P+ + +P+++ ++ G + P L++GNL
Sbjct: 323 KAYEAMQGSELDSRPLNLDYANSRPADSNPRDRATDRAKKHGDSVSPE---SETLFIGNL 379
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
F+ + +R+ F V V+LP D ++G KGFG+V F +E AK LNG
Sbjct: 380 PFDTDQETVRQFFAEVAEVASVRLPTDPDSGNLKGFGYVTFTSVEDAKNVFQQLNGAPLG 439
Query: 390 VGRT 393
GRT
Sbjct: 440 NGRT 443
>gi|297834768|ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
gi|297331106|gb|EFH61525.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
lyrata]
Length = 564
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 189 RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
++++ D+EM ++ + K+ P + + +T+FA + + D+ FF +AG+V
Sbjct: 281 KKKDSDIEMVDAEQKSNAKQPKTPTTETQGGSKTLFAGNLSFQIKRSDIENFFKEAGEVV 340
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 308
DVR + KG G++EF A+ L+G++LLG+ V + + E+ SN
Sbjct: 341 DVRF-SSYDDGTFKGYGHVEFASPEEAQKALELNGKMLLGRDVRLDLAN-ERGQRNSNPG 398
Query: 309 AGGTATGPYGAIDRKLYVGNLHFNMTE----TQLRKLFEPFGPVELVQLPLDIETGQCKG 364
G G+ R ++V + ++ E +LR LF G V V +P D ETG C+G
Sbjct: 399 RKG-----EGSQSRTIFVRGFNSSLGEDEIKKELRSLFSNCGEVTRVHVPTDRETGACRG 453
Query: 365 FGFVQF 370
++
Sbjct: 454 LAYIDL 459
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+ GNL F + + + F+ G V V+ + G KG+G V+FA E A+ A
Sbjct: 313 KTLFAGNLSFQIKRSDIENFFKEAGEVVDVRF-SSYDDGTFKGYGHVEFASPEEAQKALE 371
Query: 382 ALNGKLEIVGRTLKV 396
LNGK+ ++GR +++
Sbjct: 372 -LNGKM-LLGRDVRL 384
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
+F + TE +++ F + G++ R++ +R++ RS+G GY+EF + A
Sbjct: 278 NLFVGNLSWNVTEEWLHQEFEQFGEL-SARIMTERDTGRSRGFGYVEFTNAADAAKAYEA 336
Query: 281 ----------LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLH 330
++ G+P K K Q+ + G T P L+VGNL
Sbjct: 337 MKEHEIDGRKINLDYATGRPAN-KDQGGFKERAQNRARSFGDQTSPE---SDTLFVGNLP 392
Query: 331 FNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIV 390
F+ E + ++F P G V ++LP D+E+G+ KGFG+VQ++ ++ A+ A + L G EI
Sbjct: 393 FSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGYVQYSSVDEARKAYNELQG-AEID 451
Query: 391 GRTLKV 396
GR +++
Sbjct: 452 GRPIRL 457
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMV-----K 294
F G V R++M+R + RS+G GY++F + S A+ + G+ + G+P+ V K
Sbjct: 146 FEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNSK 205
Query: 295 PSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
P+ + G + P L++GNL F L +LF G V V++P
Sbjct: 206 PAAPAARNNDRASQYGDKRSPP----SDTLFLGNLSFQADRDTLFELFSKHGNVTSVRIP 261
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
ET Q KGFG+VQF+ ++ A A ALNG
Sbjct: 262 THPETEQPKGFGYVQFSSVDEATGALEALNG 292
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+FA + + + E F + + R++ DR+ RS+G GY++F + A A
Sbjct: 261 TLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFETPEAATKAYEA 320
Query: 281 LSGQLLLGQPVMV-----KPSEAE-KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMT 334
+ G L G+P+ + +P+E+ ++ G + P L++GNL F+
Sbjct: 321 MQGFELDGRPLNLDYANTRPAESNPRDRATDRAKKHGDSVSPE---SETLFIGNLPFDTD 377
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+ +R+ F V V+LP D ++G KGFG+V F +E AK LNG
Sbjct: 378 QETVRQFFAEVAEVTSVRLPTDPDSGNLKGFGYVSFNSVEDAKTVFQQLNG 428
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G V R+I ++ S +S+G GY++F A+ G+ + G+P+ + SE++
Sbjct: 311 FEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKEYQGREIDGRPINLDMSESK 370
Query: 300 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 359
A L++GNL FN L +F +G V ++P +T
Sbjct: 371 PRPSNPRFDRAKQFGDVPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDT 430
Query: 360 GQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
Q KGFG+++F+ ++ AKAA ALNG+ + GR ++ T
Sbjct: 431 QQPKGFGYIEFSTVDEAKAALEALNGEY-VEGRPCRLDFST 470
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
T+F + + +YE F + + R++ D+ + RS+G GY++F + A+
Sbjct: 228 TLFVGSLAWAVDDNSLYEAFQEFADLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEG 287
Query: 282 S-GQLLLGQPVMV-----KPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNM 333
S G+ L G+ + + KP+ + +++ A G P L+VGNL F++
Sbjct: 288 SQGRELAGRAMNIDFSGQKPAGDGNHQARASDRAQRHGDTVSPE---SDTLFVGNLPFDV 344
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
+ + F V V+LP D ETG KGFG+V F ++ AK A + LNG+ GR+
Sbjct: 345 DQDTVNAFFSTAAEVTSVRLPTDPETGNLKGFGYVSFNSIDDAKTAFAQLNGQYVGEGRS 404
>gi|302926157|ref|XP_003054238.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
gi|256735179|gb|EEU48525.1| hypothetical protein NECHADRAFT_102368 [Nectria haematococca mpVI
77-13-4]
Length = 507
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+FA + + +YE F + + R++ ++ + RS+G GY++F D A A
Sbjct: 252 TLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCTKAYEA 311
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG-AIDR-------------KLYV 326
+ G L G+ + NL +N A P G A DR L+V
Sbjct: 312 MQGFELDGRAL---------NLDYAN--ARPADANPAGRAADRAKRHGDTLSPESDTLFV 360
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
GNL F++ + +R+ F V V+LP D ++G KGFG+V F +E AKA A NG
Sbjct: 361 GNLPFDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKAVIDAKNG 419
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 198 RESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R + R K + + PE+D T+F +P + V EFF + +V VRL D +
Sbjct: 339 RAADRAKRHGDTLSPESD------TLFVGNLPFDVDQDAVREFFGEVAEVASVRLPTDPD 392
Query: 258 SRRSKGVGYIEFYDV 272
S KG GY+ F V
Sbjct: 393 SGNLKGFGYVSFNSV 407
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS+ +++ K ++E
Sbjct: 252 RHARRVYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 311
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G +L G PV V+ PS+ NL N A G ++G
Sbjct: 312 VEEASNAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLSSGST 368
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F +
Sbjct: 369 GGLEGPDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSV 428
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 429 TDIACAALNG-IKMGDKTLTV 448
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS +++ K ++E
Sbjct: 253 RHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 312
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N A G G
Sbjct: 313 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL---NLGAVGLTPGSA 369
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 370 GGLEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 429
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 430 TDIACAALNG-IKMGDKTLTV 449
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
+ +F + + +Y F + G++ R+I D+ + RSKG GY+EF A+
Sbjct: 239 SKNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAAL 298
Query: 280 ALSGQLLL-GQPVMV---KPSEAEKNLVQSNTSAG--GTATGPYGAIDRKLYVGNLHFNM 333
A L+ G+ V P + ++N A G A P L++GNL F+
Sbjct: 299 AAKKGALIDGREANVDFSTPRDTTAPRERANNRAAQFGDAKNP---PSDTLFLGNLSFDA 355
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
E + + F G V V+LP D ETG KGFG+V F +E A AA A+ G +I GR
Sbjct: 356 DENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMG-ADIAGRP 414
Query: 394 LKVSSVT 400
+++ T
Sbjct: 415 VRLDYAT 421
>gi|380483681|emb|CCF40465.1| cutinase negative acting protein [Colletotrichum higginsianum]
Length = 401
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFY----------- 270
T+F + + +YE F + + R++ D+ + RS+G GY++F
Sbjct: 209 TLFVGSLAWAVDDNSLYEAFQEFSDLTGARVVTDKATGRSRGFGYVDFATPEAAAAALEG 268
Query: 271 ----DVMSVPMAIALSGQLLLGQ--PVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
++ M I SGQ G+ P A+K+ G P L
Sbjct: 269 SQGRELAGRAMNIDFSGQKPAGEGNPQARAFDRAQKH---------GDTVSPE---SDTL 316
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
+VGNL F++ + +R F V V+LP D E+G KGFG+V F ++ AK A + LN
Sbjct: 317 FVGNLPFDVDQDTVRAFFSEAAEVTSVRLPTDPESGNLKGFGYVSFNSIDDAKTAFAQLN 376
Query: 385 GK 386
G+
Sbjct: 377 GQ 378
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R++ +S+G GY++F + A+ G+ L G+P+ + S +
Sbjct: 218 FEPVGGVISARVIMERSTGKSRGYGYVDFDSKSAAEKALQEYQGKELDGRPINLDMSTGK 277
Query: 300 KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET 359
+ NT A L+VGNL FN L F +G V ++P +T
Sbjct: 278 PHASNPNTDRAKQFGDVPSAPSDTLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDT 337
Query: 360 GQCKGFGFVQFA---QLEHAKAAQSALNGKLEIVGRTLKV 396
Q KGFG+VQF+ + AKAA ALNG+ + GR ++
Sbjct: 338 QQPKGFGYVQFSSVDE---AKAALEALNGEY-LDGRACRL 373
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
+ +F + + +Y F + G++ R+I D+ + RSKG GY+EF A+A
Sbjct: 266 KNLFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAALA 325
Query: 281 LSGQLLL-GQPVMV---KPSEAEKNLVQSNTSAG--GTATGPYGAIDRKLYVGNLHFNMT 334
L+ G+ V P + ++N A G A P L++GNL F+
Sbjct: 326 AKKGALIDGREANVDFSTPRDTTAPRERANNRAAQFGDAKNP---PSDTLFLGNLSFDAD 382
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E + + F G V V+LP D ETG KGFG+V F +E A AA A+ G +I GR +
Sbjct: 383 ENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYDAMMG-ADIAGRPV 441
Query: 395 KVSSVT 400
++ T
Sbjct: 442 RLDYAT 447
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS +++ K ++E
Sbjct: 234 RHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 293
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N +A G G
Sbjct: 294 VEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPNPNL---NLAAVGLTPGSA 350
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE Q+R+L E FGP+ L D ETG KG+ F + L
Sbjct: 351 GGLEGPDRIFVGGLPYYFTEGQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSV 410
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 411 TDIACAALNG-IKMGDKTLTV 430
>gi|299470875|emb|CBN78824.1| Protein for assembly of pre-ribosomal particles containing 18S rRNA
[Ectocarpus siliculosus]
Length = 517
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 19/179 (10%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALS 282
++ +P ++ DV +FF GK+ V + + RS G Y+ F + AI L
Sbjct: 284 IYLRGLPWDTSDDDVKDFFKACGKIVTVEQPKNPDG-RSSGTAYVTFDSAAAAAKAIELD 342
Query: 283 GQLLLGQPVMV-----KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 337
GQ L G+ + + KP A + G T +++GNL +++ E
Sbjct: 343 GQELGGRWLKIMMSFEKPDHARNG--EPKVKPAGCTT---------VFIGNLSWSIDEDT 391
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
+R+ F G ++ V+ D ETG+ +GFG V+F EH AA N +++GR ++V
Sbjct: 392 IRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANS--DVMGRPIRV 448
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 15/152 (9%)
Query: 70 NGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD 129
NGS RD RD+D +E HR R +R+ +R +E DR++ E +R++ R D
Sbjct: 1370 NGSSRDHHRDKDHHRESHREHRSSEREHRSDRSKEHRSDRDK-----EHRSDRDKEHRSD 1424
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
R+KE ER+ ++ S R++ S R RS R++E S+R++E ERE+++ RE R
Sbjct: 1425 RDKEHRSEREKDQHRSDRNKEHRSGERDKEHRSDRDKEHRSDRDKEHRSEREKDQHREAR 1484
Query: 190 ----ERERDL-----EMRESRRYKEKKEVVEP 212
ERE+D E ++R +KE KEV EP
Sbjct: 1485 TSIGEREKDQNRDHREKDQNRDHKE-KEVKEP 1515
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 9/141 (6%)
Query: 37 SERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRD 96
S R + + +D E E S + R D +E+ S RD++ DRDKE HR DRD++
Sbjct: 1372 SSRDHHRDKDHHRESHREHRSSEREHRSDRSKEHRSDRDKEHRSDRDKE-HRSDRDKEHR 1430
Query: 97 RGRERERE-TERDRERSRERREKE----KERERRERRDREKERERERDGERRS-SSRSRR 150
RE+++ ++R++E R+KE +++E R RD+E ERE+D R + +S R
Sbjct: 1431 SEREKDQHRSDRNKEHRSGERDKEHRSDRDKEHRSDRDKEHRSEREKDQHREARTSIGER 1490
Query: 151 SSSQSR--RSSSRSRRERERE 169
Q+R R ++R +E+E
Sbjct: 1491 EKDQNRDHREKDQNRDHKEKE 1511
>gi|1438951|gb|AAB04133.1| cutinase negative acting protein [Nectria haematococca mpVI]
Length = 507
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 26/179 (14%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-A 280
T+FA + + +YE F + + R++ ++ + RS+G GY++F D A A
Sbjct: 252 TLFAGSLSWNIDDDALYEAFKEFNGLVGARVVTEKGTGRSRGFGYVDFNDPEGCTKAYEA 311
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYG-AIDR-------------KLYV 326
+ G L G+ + NL +N A P G A DR L+V
Sbjct: 312 MQGFELDGRAL---------NLDYAN--ARPADANPAGRAADRAKRHGDTLSPESDTLFV 360
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
GNL ++ + +R+ F V V+LP D ++G KGFG+V F +E AKA A NG
Sbjct: 361 GNLPIDVDQDAVREFFGEVAEVASVRLPTDPDSGNLKGFGYVSFNSVEDAKAVIDAKNG 419
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 198 RESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRN 257
R + R K + + PE+D T+F +P+ + V EFF + +V VRL D +
Sbjct: 339 RAADRAKRHGDTLSPESD------TLFVGNLPIDVDQDAVREFFGEVAEVASVRLPTDPD 392
Query: 258 SRRSKGVGYIEFYDV 272
S KG GY+ F V
Sbjct: 393 SGNLKGFGYVSFNSV 407
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 223 VFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
V+ +P A E+ V FFS+ +++ K ++E V
Sbjct: 257 VYVGGLPPTANEQSVSTFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEAS 316
Query: 277 MAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPYGAIDR 322
A+AL G +L G PV V+ PS+ NL N A G ++G G ++
Sbjct: 317 NAMALDGIILEGVPVKVRRPTDYNPSLAATLGPSQPNPNL---NLGAVGLSSGSTGGLEG 373
Query: 323 --KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
+++VG L + TE Q+R+L E FGP+ L D ETG KG+ F + A
Sbjct: 374 PDRIFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQDPSVTDIAC 433
Query: 381 SALNGKLEIVGRTLKV 396
+ALNG +++ +TL V
Sbjct: 434 AALNG-IKMGDKTLTV 448
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 58/250 (23%)
Query: 165 ERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVF 224
E++ + + E + TVF
Sbjct: 191 EQKPQKAAKSE-----------------------------------------SGESCTVF 209
Query: 225 AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ 284
++ + + + F + G V + R+IMD S RSKG GY++F + A+A++GQ
Sbjct: 210 VGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVDFDSPEAAKAAVAVNGQ 269
Query: 285 ---------LLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE 335
L + P +P++ Q S G P +++GNL FN TE
Sbjct: 270 KEIDGRMVNLDISTP---RPAQNNNGFAQQRASNFGDKQSP---PSDTVFIGNLSFNATE 323
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLK 395
+R F G ++ V+LP D+ +G+ KGFG+V F ++ AK +NG I GR +
Sbjct: 324 DDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSIDAAKQCVE-MNGHF-IAGRPCR 381
Query: 396 VSSVTDHVGT 405
+ T G
Sbjct: 382 LDFSTPRTGN 391
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 20/198 (10%)
Query: 110 ERSRERREKEKERER----------RERRDREKERERERDGERRSSSRSRR-SSSQSRRS 158
+ S E++ ++ + R + + E + E + +R QS RS
Sbjct: 187 DESEEQKPQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRS 246
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ + + + + ++E+ R +L++ R + + A
Sbjct: 247 KGFGYVDFDSPEAAKAAVAV----NGQKEIDGRMVNLDISTPRPAQNNNGFAQQRASNFG 302
Query: 219 DQR-----TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
D++ TVF + ATE DV FS G+++ VRL D NS R KG GY+ F +
Sbjct: 303 DKQSPPSDTVFIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGFGYVTFDSID 362
Query: 274 SVPMAIALSGQLLLGQPV 291
+ + ++G + G+P
Sbjct: 363 AAKQCVEMNGHFIAGRPC 380
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + F G V R+I +R + RS+G GY++F + A+
Sbjct: 179 TIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAVKE 238
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK----LYVGNLHFNMTET 336
+ G+ + G+ + S + + GG +G + + L++GNL FN
Sbjct: 239 MHGKQIDGREINCDMSTS-----KPAGGNGGDRAKKFGDVPSQPSDTLFLGNLSFNADRD 293
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
Q+ +LF G + V+LP ET Q KGFG+VQ+ + A++A AL G
Sbjct: 294 QIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQG 342
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 209 VVEPEADPE---RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A + R R V+ +P A E+ V +F++ +++
Sbjct: 199 VIQPQAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYIN 258
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G L G PV V+ PS+ NL
Sbjct: 259 HDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 315
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 316 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 375
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 376 GYAFCVYQDLNVTDIACAALNG-IKMGDKTLTV 407
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 209 VVEPEADPE---RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A + R R V+ +P A E+ V +F++ +++
Sbjct: 199 VIQPQAMTQQATRHARRVYVGGLPPTANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYIN 258
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G L G PV V+ PS+ NL
Sbjct: 259 HDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 315
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 316 NLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 375
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 376 GYAFCVYQDLNVTDIACAALNG-IKMGDKTLTV 407
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + F G V R+I +R + RS+G GY++F + A+
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTA-TGPYGAI----DRKLYVGNLHFNMTE 335
+ G+ + G+ E ++ S +AG +G + L++GNL FN
Sbjct: 226 MHGKEIDGR-------EINCDMSTSKPAAGNNDRAKKFGDVPSEPSETLFLGNLSFNADR 278
Query: 336 TQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+ ++F FG + V++P ET Q KGFG+VQ+ +E AK A AL G
Sbjct: 279 DNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQG 328
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F + + +YE F V R++ D++S RS+G GY++F + A
Sbjct: 289 TLFVGNLGWGVDDNALYEEFQNNEGVTGARVVTDKDSGRSRGFGYVDFETPEAAEKAYND 348
Query: 281 LSGQLLLGQPV----MVKPSEAEKNLVQSNTSA--GGTATGPYGAIDRKLYVGNLHFNMT 334
+G L G+ + KPS ++ A G P L+VGNL F+
Sbjct: 349 KNGAFLQGREMRLDFAAKPSADSTPNARAAERARKHGDVISPE---SDTLFVGNLSFSAN 405
Query: 335 ETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTL 394
E + F V+ +++P D E+G+ KGF +V F+ ++ AKAA ALNG ++ GR +
Sbjct: 406 EESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAKAAFEALNGS-DLDGRPV 464
Query: 395 KV 396
++
Sbjct: 465 RL 466
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 122 RERRERRDRE------KERERERDGERRSSSRSRRSSS--------------QSRRSSSR 161
++R+ + E K+ + DGE S + + Q+ +
Sbjct: 257 KKRKAEAEPEAAAASTKKNKASADGEASEKSATLFVGNLGWGVDDNALYEEFQNNEGVTG 316
Query: 162 SRRERERESERERE---LELERERERERE--------LRERERDLEM------------R 198
+R +++S R R ++ E E+ L+ RE L+ R
Sbjct: 317 ARVVTDKDSGRSRGFGYVDFETPEAAEKAYNDKNGAFLQGREMRLDFAAKPSADSTPNAR 376
Query: 199 ESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNS 258
+ R ++ +V+ PE+D T+F + A E V FF+K KV+ +R+ D+ S
Sbjct: 377 AAERARKHGDVISPESD------TLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQES 430
Query: 259 RRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPV 291
R KG Y+ F V A AL+G L G+PV
Sbjct: 431 GRPKGFAYVTFSSVDDAKAAFEALNGSDLDGRPV 464
>gi|342887855|gb|EGU87283.1| hypothetical protein FOXB_02159 [Fusarium oxysporum Fo5176]
Length = 505
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 200 SRRYKEKKEVVEPEADPERDQ----RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMD 255
S++ K + + +AD ++ + T+FA + + +YE F + + R++ +
Sbjct: 229 SKKRKAED---DGDADAKKTKTDEPTTLFAGSLSWSIDDNALYEAFKHIEGLANARVMTE 285
Query: 256 RNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMVKPSEAEKNLVQSNTSAG---- 310
+ + RS+G GY++F D S A + G L G+ + + + A + A
Sbjct: 286 KGTGRSRGFGYVDFNDAASCTKAYETMQGVELEGRAINLDYANARPADANPQSRAADRAQ 345
Query: 311 --GTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFV 368
G P L+VGNL F++ + +R+ F V V+LP D ++G KGFG+V
Sbjct: 346 RHGDTVSPE---SDTLFVGNLPFDVDQDTVREFFSEVAEVASVRLPTDPDSGNLKGFGYV 402
Query: 369 QFAQLEHAKAAQSALNG 385
F +E AK A NG
Sbjct: 403 SFNSVEDAKQVFEAKNG 419
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 209 VVEPEA---DPERDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A R R V+ +P A E+ V +F++ +++
Sbjct: 190 VIQPQAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYIN 249
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G + G PV V+ PS+ NL
Sbjct: 250 HDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 306
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 307 NLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 366
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 367 GYAFCVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|242048366|ref|XP_002461929.1| hypothetical protein SORBIDRAFT_02g010740 [Sorghum bicolor]
gi|241925306|gb|EER98450.1| hypothetical protein SORBIDRAFT_02g010740 [Sorghum bicolor]
Length = 943
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 153/367 (41%), Gaps = 49/367 (13%)
Query: 63 RRDEDEENGSRRDRDRDRD----RDKERHRRDRDRDRDRGRERERETERDRERSRERREK 118
RR+ DEE + RD R + E H DR R + RE ERD E R +
Sbjct: 79 RRNHDEEYATARDHRRSKRIGSREHAEFHGEFEDRYRSSHQSREDSYERDHEYGRYGYDS 138
Query: 119 EKERERRERRDREK---ERERERDGERRSSSRSRRSSSQSRRSSSRSRRE---RERESER 172
+ ER RR+ R + E ERER G SR R S R + SRS S
Sbjct: 139 DYERGRRDSSWRRRDSCESERERSGL----SREREESPYMRHNRSRSHGHDGRSRSRSRS 194
Query: 173 ERELELEREREREREL-------RERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFA 225
R + L R RE D + RR+ + V P A TV
Sbjct: 195 RSPRARSHGRNQRDGLYDDNRFDRRREYDWD---DRRHGDS---VVPSA-------TVVV 241
Query: 226 YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL 285
+ LK + D+Y+ ++ G +R VR+I +RNS S+G +I+F V + + +G+
Sbjct: 242 KGLSLKTNDDDLYQILAQWGPLRSVRVIKERNSGMSRGFAFIDFPTVEAARRMMEATGEN 301
Query: 286 LL---GQPVMV--KPSEAEKNLVQSNTSAGGTATGPYGAIDRK---------LYVGNLHF 331
L G+ V + S + N ++ + ATG R+ L V L
Sbjct: 302 GLEIDGRNVFFQYRTSCFQCNEPRTEDALPADATGSTPHFGRRGSELGPTHVLVVRGLDE 361
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG-KLEIV 390
N E LR F P++ ++L D T +GF FV F +E A A A NG LE
Sbjct: 362 NADEEMLRYEFAKHAPIKDIRLVRDKFTHVSRGFAFVHFHSVEDATKALEATNGTTLEKN 421
Query: 391 GRTLKVS 397
G+ L+V+
Sbjct: 422 GQVLRVA 428
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 209 VVEPEA---DPERDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A R R V+ +P A E+ V +F++ +++
Sbjct: 190 VIQPQAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYIN 249
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G + G PV V+ PS+ NL
Sbjct: 250 HDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 306
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 307 NLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 366
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 367 GYAFCVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 209 VVEPEA---DPERDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A R R V+ +P A E+ V +F++ +++
Sbjct: 190 VIQPQAMTQQATRHARRVYVGGLPPSANEQTVAIYFNQVMAAIGGNTAGPGDAVLNVYIN 249
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G + G PV V+ PS+ NL
Sbjct: 250 HDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 306
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 307 NLAAVGLTAGSNGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 366
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 367 GYAFCVYQDLTVTDIACAALNG-IKMGDKTLTV 398
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 209 VVEPEA---DPERDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSR 259
V++P+A R R V+ +P A E+ V +F++ +++
Sbjct: 196 VIQPQAMTQQATRHARRVYVGGLPPSANEQTVAVYFNQVMAAIGGNTAGPGDAVLNVYIN 255
Query: 260 RSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQS 305
K ++E V A+AL G + G PV V+ PS+ NL
Sbjct: 256 HDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPSPNL--- 312
Query: 306 NTSAGGTATGPYGAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
N +A G G G ++ +++VG L + TE Q+R+L E FGP+ L D ETG K
Sbjct: 313 NLAAVGLTAGSTGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSK 372
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F + L A +ALNG +++ +TL V
Sbjct: 373 GYAFCVYQDLTVTDIACAALNG-IKMGDKTLTV 404
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 206 KKEVVEPEADPERDQ--RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG 263
KK + +P D +T++ Q+ + F + G V D R+ DR+S RS+G
Sbjct: 377 KKSKTDSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRG 436
Query: 264 VGYIEF-YDVMSVPMAIALSGQLLLGQPVMV--KPSEAEKNLVQSNTSAGGTATGPYGAI 320
GY++F ++ + G+ L G+ + V +P+ ++ +S A
Sbjct: 437 FGYVDFATSAEALRASKEAHGKELDGRALRVDLQPARGPQDRAESRAK---HFKDERSAP 493
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF-AQLEHAKAA 379
L++G L + +TE + F FG V V+LP +I++G+ KGFG+V+F +Q AKA
Sbjct: 494 SNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKAL 553
Query: 380 QS----ALNGK 386
++ AL G+
Sbjct: 554 ETMNGQALGGR 564
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 110/248 (44%), Gaps = 49/248 (19%)
Query: 166 RERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFA 225
++R++E + + + E D T++
Sbjct: 175 KKRKAEETKTAPAAKAAKTE------------------------------SGSDVYTIWC 204
Query: 226 YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQL 285
+ ++T DV EFF G+++DVR+ MD + +++G +++F A+A+SG
Sbjct: 205 GGLNYQSTADDVREFFGSCGEIKDVRIRMDDATGKNRGFCHVDFATQEGKEAALAMSGNE 264
Query: 286 LLGQPVMVKPSEAE-KNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTE----TQLRK 340
+G+ + + ++ + V+ S Y + K+++ NL+ + E L +
Sbjct: 265 FMGRKIRLDGADGSTRQRVKKEES--------YSSATSKVFIANLNHDHDEQSHRAALTE 316
Query: 341 LFEPFGP-VELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSV 399
F FG V ++LP + ETG KG G+++F E A+AA ++G +EI GR L+
Sbjct: 317 AFSQFGTIVGDIRLPYNRETGGLKGIGYIEFETKEQAEAAVKGMSG-VEINGRPLR---- 371
Query: 400 TDHVGTQD 407
TD G D
Sbjct: 372 TDFSGEND 379
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 26/201 (12%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSK------AGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
R R V+ +P A E+ V FFS +++ K ++E
Sbjct: 223 RHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRS 282
Query: 272 VMSVPMAIALSGQLLLGQPVMVK--------------PSEAEKNLVQSNTSAGGTATGPY 317
V A+AL G + G PV V+ PS+ NL N +A G G
Sbjct: 283 VEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQPSPNL---NLAAVGLTPGSS 339
Query: 318 GAIDR--KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEH 375
G ++ +++VG L + TE+Q+R+L E FG + L D ETG KG+ F + +
Sbjct: 340 GGLEGPDRIFVGGLPYYFTESQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSV 399
Query: 376 AKAAQSALNGKLEIVGRTLKV 396
A +ALNG +++ +TL V
Sbjct: 400 TDIACAALNG-IKMGDKTLTV 419
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 6/181 (3%)
Query: 206 KKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVG 265
KK E +P T+F ++ + + F G V R++ +R + RS+G G
Sbjct: 185 KKPKTELAGEPA----TIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYG 240
Query: 266 YIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
Y++F D AI + G+ + G+P+ S ++ + A P D L
Sbjct: 241 YVDFEDKSYAEKAIKEMHGKEIDGRPINCDMSTSKPAGAPRDDRAKKFGDVPSEPSD-TL 299
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
++GNL F L ++F +G + V++P ET Q KGFG+VQ+ +E A A L
Sbjct: 300 FLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKAFEGLQ 359
Query: 385 G 385
G
Sbjct: 360 G 360
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
+TVF + + + + F+ AG V R+I ++ + RSKG GY++F +
Sbjct: 168 KTVFVGGLSWNVDDDWLTKEFADAGAVS-ARVITEKATGRSKGFGYVDFASGADAQKCVE 226
Query: 281 ------LSGQLL---LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHF 331
+ G+ + + V P + +++ ++ G + P L+VGNL F
Sbjct: 227 EFQDKEIDGRTVRLDISTNVRQTPEQKQRD---RSSQYGDQLSEP----ADTLFVGNLSF 279
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
+ L +F +G V ++LP ET Q KGFG+VQF ++ AKAA L+G E +G
Sbjct: 280 DTNRDDLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVDEAKAALEGLSG-YEYLG 338
Query: 392 RTLKV 396
R+ ++
Sbjct: 339 RSFRL 343
>gi|380026003|ref|XP_003696751.1| PREDICTED: uncharacterized protein LOC100864850 [Apis florea]
Length = 632
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 34/201 (16%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL----------------IMDRNSRRSK 262
D+RT+F +P T++ + + F + GK+ +RL I + + K
Sbjct: 346 DERTIFVGNLPKDVTKKKLRKLFKQFGKIDTIRLRGKIAKSVNVSKRVAAIKNELHPKLK 405
Query: 263 GV-GYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 321
V YI+F SV +++++G G + V S +N S S
Sbjct: 406 SVYAYIKFVSKESVKESLSINGTEFEGNYLRVNASNKSENKFDSKKS------------- 452
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+++GNLH+N+ + + K F+ G +E V++ D +TG KGFG+V F E A
Sbjct: 453 --IFLGNLHYNIDDNTIIKHFKQCGEIESVRVVRDNKTGVGKGFGYVNFKN-EDAVTLAL 509
Query: 382 ALNGKLEIVGRTLKVSSVTDH 402
L+G I R ++V V D
Sbjct: 510 ELDG-TTISNREVRVKPVIDQ 529
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 119/205 (58%), Gaps = 32/205 (15%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
L + +E+R +++D DSS K +R + S+ S + +E+E+E+ G R+++
Sbjct: 646 LSRDCKEERHREKDSDSS---KGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKEL 702
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
E G ++R +D+++D+E+ RD++ ++GR +ER +R +E+ + R +E+ K R+++
Sbjct: 703 EKGRDKERVKDQEKDQEK---GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+D EK RE+++D E E++RE +++ELE RE+++++E
Sbjct: 760 KDLEKCREKDQDKEL----------------------EKDREKNQDKELEKGREKDQDKE 797
Query: 188 L---RERERDLEMRESRRYKEKKEV 209
L RE++RD EM ++R + KE+
Sbjct: 798 LEKGREKDRDKEMEKAREKDQDKEL 822
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 88/141 (62%), Gaps = 9/141 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG---KRSRRDE 66
+K +E+ R++ QD + ++ R+++ E++ K +D E E+ EK + K +D
Sbjct: 783 DKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDR 842
Query: 67 DEENGSRRDRDRDRDRDKERHR-----RDRDRDRDRGRERERETERDRERSRERREKEKE 121
D+ RD+ RD+DRDK R + R++DRD+ R ++RE+ ERDR++ RE ++++KE
Sbjct: 843 DKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGRE-KDRDKE 901
Query: 122 RERRERRDREKERERERDGER 142
+ + +D+EKER ++RD ER
Sbjct: 902 QVKTREKDQEKERLKDRDKER 922
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 104/165 (63%), Gaps = 18/165 (10%)
Query: 50 EEEEEKSRSGKRSR-----RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERER 103
++E+ K R KRS+ R++D++ +DR++++D++ E+ R +D+D++ ++GRE++R
Sbjct: 747 DKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDR 806
Query: 104 ETERDRERSRER---------REKEKERERRERRDREKERERERDGER-RSSSRSRRSSS 153
+ E ++ R +++ ++++KE E+ + +DR+K RE++RD R + + R
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 154 QSRRSSSRSR-RERERESERERELELERERERERE-LRERERDLE 196
R R + RE++RE RER+ + RE++R++E ++ RE+D E
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQE 911
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 110/186 (59%), Gaps = 24/186 (12%)
Query: 11 KTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEE 69
K +E+ R++ QD + ++ ++++ E+ K +D E E+ EK R + + R++D++
Sbjct: 760 KDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQD 819
Query: 70 NGSRRDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
+ R++D+D++ E+ +DRD+ R++ R++ R+ +RD+ R ++R + +EK+R++
Sbjct: 820 KELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLRE 879
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+DREK RER+RD R ++R++E + RE + E+ER ++R+
Sbjct: 880 KDREKIRERDRDKGR--------------------EKDRDKEQVKTREKDQEKERLKDRD 919
Query: 188 LRERER 193
+ERE+
Sbjct: 920 -KEREK 924
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 129/222 (58%), Gaps = 19/222 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRS-----GKRSRR 64
EK +E+ R +++ D ++ R+++ E+ K + +E+EK R G+ +R
Sbjct: 699 EKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKR 758
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERER 124
+D E +D+D++ ++D+E+ ++D++ ++GRE++++ E ++ R ++R +KE E+ R
Sbjct: 759 SKDLEKCREKDQDKELEKDREK---NQDKELEKGREKDQDKELEKGREKDR-DKEMEKAR 814
Query: 125 RERRDREKERERERD-------GERRSSSRSRRSSSQSRRSSSRSR-RERERESEREREL 176
+ +D+E E+ RE+D G+ + + R R R + RE++R+ RE++
Sbjct: 815 EKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDR 874
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ RE++RE+ +RER+RD + RE R KE+ + E + + ER
Sbjct: 875 DKLREKDREK-IRERDRD-KGREKDRDKEQVKTREKDQEKER 914
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
+K +E+ R++ QD + ++ ++++ E+ K D E++ +K R R + R++D
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 69 ENGSRRDRDRDRDRDKERHR---------RDRDRDRDRGRERERETERDRERSRERREKE 119
+ +DRD+ R++D+E+ R +DRD+++ + RE+++E ER ++R +E REK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKE-REKV 925
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+++ R RD+EK+R +E ++++ + R +S + R+ E + + ER
Sbjct: 926 RDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPER 978
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 119/205 (58%), Gaps = 32/205 (15%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
L + +E+R +++D DSS K +R + S+ S + +E+E+E+ G R+++
Sbjct: 646 LSRDCKEERHREKDSDSS---KGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKEL 702
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
E G ++R +D+++D+E+ RD++ ++GR +ER +R +E+ + R +E+ K R+++
Sbjct: 703 EKGRDKERVKDQEKDQEK---GRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRS 759
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+D EK RE+++D E E++RE +++ELE RE+++++E
Sbjct: 760 KDLEKCREKDQDKEL----------------------EKDREKNQDKELEKGREKDQDKE 797
Query: 188 L---RERERDLEMRESRRYKEKKEV 209
L RE++RD EM ++R + KE+
Sbjct: 798 LEKGREKDRDKEMEKAREKDQDKEL 822
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 88/141 (62%), Gaps = 9/141 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSG---KRSRRDE 66
+K +E+ R++ QD + ++ R+++ E++ K +D E E+ EK + K +D
Sbjct: 783 DKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDR 842
Query: 67 DEENGSRRDRDRDRDRDKERHR-----RDRDRDRDRGRERERETERDRERSRERREKEKE 121
D+ RD+ RD+DRDK R + R++DRD+ R ++RE+ ERDR++ RE ++++KE
Sbjct: 843 DKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGRE-KDRDKE 901
Query: 122 RERRERRDREKERERERDGER 142
+ + +D+EKER ++RD ER
Sbjct: 902 QVKTREKDQEKERLKDRDKER 922
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 104/165 (63%), Gaps = 18/165 (10%)
Query: 50 EEEEEKSRSGKRSR-----RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERER 103
++E+ K R KRS+ R++D++ +DR++++D++ E+ R +D+D++ ++GRE++R
Sbjct: 747 DKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDR 806
Query: 104 ETERDRERSRER---------REKEKERERRERRDREKERERERDGER-RSSSRSRRSSS 153
+ E ++ R +++ ++++KE E+ + +DR+K RE++RD R + + R
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 154 QSRRSSSRSR-RERERESERERELELERERERERE-LRERERDLE 196
R R + RE++RE RER+ + RE++R++E ++ RE+D E
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQE 911
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 110/186 (59%), Gaps = 24/186 (12%)
Query: 11 KTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEE 69
K +E+ R++ QD + ++ ++++ E+ K +D E E+ EK R + + R++D++
Sbjct: 760 KDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQD 819
Query: 70 NGSRRDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
+ R++D+D++ E+ +DRD+ R++ R++ R+ +RD+ R ++R + +EK+R++
Sbjct: 820 KELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLRE 879
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+DREK RER+RD R ++R++E + RE + E+ER ++R+
Sbjct: 880 KDREKIRERDRDKGR--------------------EKDRDKEQVKTREKDQEKERLKDRD 919
Query: 188 LRERER 193
+ERE+
Sbjct: 920 -KEREK 924
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 129/222 (58%), Gaps = 19/222 (8%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSR-----SGKRSRR 64
EK +E+ R +++ D ++ R+++ E+ K + +E+EK R G+ +R
Sbjct: 699 EKELEKGRDKERVKDQEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKR 758
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERER 124
+D E +D+D++ ++D+E+ ++D++ ++GRE++++ E ++ R ++R +KE E+ R
Sbjct: 759 SKDLEKCREKDQDKELEKDREK---NQDKELEKGREKDQDKELEKGREKDR-DKEMEKAR 814
Query: 125 RERRDREKERERERD-------GERRSSSRSRRSSSQSRRSSSRSR-RERERESEREREL 176
+ +D+E E+ RE+D G+ + + R R R + RE++R+ RE++
Sbjct: 815 EKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDR 874
Query: 177 ELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+ RE++RE+ +RER+RD + RE R KE+ + E + + ER
Sbjct: 875 DKLREKDREK-IRERDRD-KGREKDRDKEQVKTREKDQEKER 914
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 100/173 (57%), Gaps = 11/173 (6%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDE 68
+K +E+ R++ QD + ++ ++++ E+ K D E++ +K R R + R++D
Sbjct: 807 DKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDR 866
Query: 69 ENGSRRDRDRDRDRDKERHR---------RDRDRDRDRGRERERETERDRERSRERREKE 119
+ +DRD+ R++D+E+ R +DRD+++ + RE+++E ER ++R +E REK
Sbjct: 867 DKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKE-REKV 925
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESER 172
+++ R RD+EK+R +E ++++ + R +S + R+ E + + ER
Sbjct: 926 RDKGRDRDRDQEKKRNKELTEDKQAPEQRSRPNSPRVKQEPRNGEESKIKPER 978
>gi|302658783|ref|XP_003021091.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
gi|291184970|gb|EFE40473.1| hypothetical protein TRV_04804 [Trichophyton verrucosum HKI 0517]
Length = 479
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L++GN+ F+ E +++LF +G ++ ++LP D E+G+ KGFG+VQF+ ++ A+AA A
Sbjct: 346 LFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGRPKGFGYVQFSSVDEARAALEAE 405
Query: 384 NGKLEIVGRTLKV 396
+G ++ GR++++
Sbjct: 406 HG-ADLGGRSIRL 417
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 247 VRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV---------KPS 296
+ R++ DR S RS+G GY++F A A SG LL G+ + + KP
Sbjct: 206 AKSARVVTDRESGRSRGFGYVDFATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQ 265
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
+ N + G P L+VGN+ F+ E+ + F V +++P D
Sbjct: 266 DKAANRAAKH----GDTISPE---SDTLFVGNMPFSADESVVSDFFNSVASVASLRIPTD 318
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
E+G+ KGF +V F +E AK A LNG ++ GR +++
Sbjct: 319 QESGRPKGFAYVTFNSVEDAKNAFEQLNGS-DLNGRPVRL 357
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 51/72 (70%), Gaps = 14/72 (19%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEY+YLEKTVEEQ +D DSS KKK +SERSYRKRE+ +E EE KS K
Sbjct: 1 MDFDEYDYLEKTVEEQ----EDHDSSRKKK-----ESERSYRKREEIDEGIEETKS---K 48
Query: 61 RSRRDEDEENGS 72
RSR DEENGS
Sbjct: 49 RSRG--DEENGS 58
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 9/187 (4%)
Query: 215 DPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMS 274
D E T++ + + +YE F + R++ D+ S RS+G GYI+F +
Sbjct: 208 DSEEKSATLWCGNLGWGIDDNILYEEFKDFEGLTGARVVSDKESGRSRGFGYIDFDTHEN 267
Query: 275 VPMAI-ALSGQLLLGQPV----MVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNL 329
A A +G L G+ + KP+ A ++ + S G P L+VGNL
Sbjct: 268 AEKAFNAKNGGDLQGREMRLDFAAKPAAAPQDRAAARASKHGDVVSP---PSDTLFVGNL 324
Query: 330 HFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEI 389
F+ E + F V+ +++P D+E+G+ KGF +V F ++ AK A LNG +I
Sbjct: 325 PFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYVSFYSIDDAKNAFEQLNGA-DI 383
Query: 390 VGRTLKV 396
GR +++
Sbjct: 384 DGRPVRL 390
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 77/115 (66%), Gaps = 12/115 (10%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
+++DRD+DR KE+ DRD+DR +E++R+ +R++E+ R++ R KEK+R+R + +DR++
Sbjct: 1880 KEKDRDQDRSKEK-----DRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQ 1934
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+R +E+D +R RS + R S R R +E ER+RE E ER R+++ E
Sbjct: 1935 DRNKEKDRDR------DRSKEKDRERSRERERSRGKEGERQRETEGERHRDQDGE 1983
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 21/113 (18%)
Query: 43 KREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRG 98
K +D +++ +EK R R++ +D D++ +DRD+DR+++K+R R +DRD+DR+
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQDRN-- 1937
Query: 99 RERERETERDRERSRERREKE---------KERERRERRDREKERERERDGER 142
+E +RDR+RS+E+ + KE ER +R+ E ER R++DGE+
Sbjct: 1938 ----KEKDRDRDRSKEKDRERSRERERSRGKEGER--QRETEGERHRDQDGEK 1984
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 47/183 (25%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
F G++ VR++ +R++ RS+G GY+E+ + + A EA+K
Sbjct: 315 FESFGELSGVRIMTERDTGRSRGFGYVEYTNAVDAAKAF-----------------EAKK 357
Query: 301 N------LVQSNTSAGGTAT----GPYGAIDR-----------------KLYVGNLHFNM 333
++ + + G A G G DR L+VGNL F+
Sbjct: 358 GAEIDGRVINLDYATGRPANKDQQG--GFKDRANARARSFGDQASPESDTLFVGNLPFDA 415
Query: 334 TETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRT 393
E + +LF G + ++LP D ++G+ KGFG+VQ++ ++ A+AA + L G +++GR
Sbjct: 416 NEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAFNELQG-ADLLGRP 474
Query: 394 LKV 396
+++
Sbjct: 475 VRL 477
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 254 MD----------------------RNSRRSKGVGYIEFYDVMSVPMAI-ALSGQLLLGQP 290
+D R + +S+G GY++F + AI + G+ + G+P
Sbjct: 246 IDDDWLKREFEHLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAIEEMQGREIDGRP 305
Query: 291 VMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVEL 350
+ + S + + N L++GNL FN +L ++F +G V
Sbjct: 306 INLDLSTGRPHATKPNNDRAKQFGDQQSPPSDTLFIGNLSFNANRDKLFEIFGEYGNVIS 365
Query: 351 VQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+LP +T Q KGFG+VQF ++ AKAA ALNG
Sbjct: 366 CRLPTHPDTQQPKGFGYVQFGSVDEAKAALEALNG 400
>gi|300707379|ref|XP_002995900.1| hypothetical protein NCER_101090 [Nosema ceranae BRL01]
gi|239605136|gb|EEQ82229.1| hypothetical protein NCER_101090 [Nosema ceranae BRL01]
Length = 476
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 217 ERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 276
++D R F +P TE ++ + GK V + + + R+KG +IEF
Sbjct: 241 DKDLRVCFMKGIPFDLTEEELKKEVGLIGKTVRVSIPVTGDKNRNKGFAFIEFVKEADAK 300
Query: 277 MAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTET 336
+ L Q L G+ + V + SN+ T L V NL F T+
Sbjct: 301 KCLKLDNQELFGRKINVS--------IASNSERKKKYT---------LKVNNLPFKCTKE 343
Query: 337 QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
L K FG ++ +P+ E + KGF F+ ++ + LN KL RTL V
Sbjct: 344 DLIKYLSKFGEIKGCHIPM--EDDRTKGFAFI---FIDDESTFKKLLNAKLTFKDRTLFV 398
Query: 397 SSVTDH 402
D
Sbjct: 399 KDADDQ 404
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 179 ERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVY 238
E E E K+ K EP TVF ++ + +
Sbjct: 158 EDEEEESSP----------------KKAKTDGEPA--------TVFVGRLSWSIDDEWLK 193
Query: 239 EFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSE 297
+ F G V R++ +R + RS+G GY++F D A+ + G+ + G+P+ V S
Sbjct: 194 QEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINVDMST 253
Query: 298 AEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 357
++ + P D L++GNL FN + ++F FG + V++P
Sbjct: 254 SKPTVNPREDRQKRFGDIPSEPSD-TLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHP 312
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNG 385
ET Q KGFG+VQ+ ++ AK A AL G
Sbjct: 313 ETEQPKGFGYVQYTSIDDAKKALEALQG 340
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 296 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+E E+ SN SA A + L++ ++++ TE++LR+ FE +GP++++ +
Sbjct: 83 NEVEEWDAHSNASATSNAF-------KTLFIARVNYDTTESKLRREFESYGPIKMISIAH 135
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
DI TG+ KG+ F+++A +A +GK
Sbjct: 136 DINTGKPKGYAFIEYAHERDMHSAYKYADGK 166
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 51/225 (22%)
Query: 162 SRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+++++ E+E EP
Sbjct: 160 NKKQKNEETE---------------------------------------EPA-------- 172
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T+F ++ + + + F G V R+I +R + RS+G GY++F + AI
Sbjct: 173 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 232
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRK 340
+ G+ + G+P+ S ++ +N A P D L++GNL FN + +
Sbjct: 233 MQGKEIDGRPINCDMSTSKP--AGNNDRAKKFGDTPSEPSDT-LFLGNLSFNADRDAIFE 289
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
LF G V V++P ET Q KGFG+VQF+ +E AK A AL G
Sbjct: 290 LFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQG 334
>gi|168041522|ref|XP_001773240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675435|gb|EDQ61930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P +T+F + K T+ +YEFF+ AG V DVR+ D + RS+G G++EF
Sbjct: 311 PTTSSTGGSKTIFVKNLAWKVTQDTLYEFFADAGTVADVRISQDDDG-RSRGFGHVEFET 369
Query: 272 VMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID---------- 321
A+ SGQ + G+ + + G AT P G D
Sbjct: 370 PEGAQNALLKSGQNVEGREIWCDLARER-----------GAAT-PGGGKDWSQTPNGGTR 417
Query: 322 -------RKLYV-GNLHFNMTET---QLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
+ YV G F ET L KLF G V V++P D E+GQ KGF +V+F
Sbjct: 418 GGRSGGGQTAYVRGFDKFQDEETIRSGLTKLFSDCGTVLNVRIPTDRESGQIKGFAYVEF 477
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 136/348 (39%), Gaps = 71/348 (20%)
Query: 297 EAEKNLVQSNTSAGGTATGPYGAI-DRKLYVGNLHFNMTETQLRKLFE-----------P 344
+A + ++N + GP R+LYVGN+ F +E + F P
Sbjct: 184 QAAGQIPRNNVQSAVPVVGPSVTCQSRRLYVGNIPFGCSEDAMLDFFNQQMHLCGLAQAP 243
Query: 345 FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV-------- 396
PV Q+ LD K F F++F ++ A A +G + +G+ LK+
Sbjct: 244 GNPVLACQMNLD------KNFAFIEFRSIDETTAGM-AFDG-INFMGQQLKIRRPRDYQP 295
Query: 397 SSVTDHVGTQDTAAKSAD-----FDDDDGGGLA--LNAQSRALLMQKLDR-------TGI 442
S + +G + AD F GGL LNA+ L+ + T +
Sbjct: 296 MSTSYDMGNMMVSNIVADSPYKIFI----GGLPSYLNAEQVKELLSSFGQLKAFNLVTDV 351
Query: 443 ATSIAGSLGVAPAVNGSAVNQQAIS-----------LPVVGQPAVPVPAVTAPVIPNMAA 491
+T ++ A ++ S + QAI+ L V A A++ P +
Sbjct: 352 STGVSKGYAFAEYLDPS-LTDQAIAGLNGMQLGDKNLVVQLSCANARAAMSTTAFPQIQV 410
Query: 492 EFI------GSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI------- 538
I G P+E L L NM + + +I D+ EEC+KYG VK I
Sbjct: 411 AGIDLSHGAGPPTEVLCLMNMVTEEELKEDEEYEDILEDIREECAKYGFVKSIEVPRSIP 470
Query: 539 YVDKRSAGFVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
VD G V++ F S + AQ A+ R FA R + + P+ Y
Sbjct: 471 GVDVTGVGKVFVEFNSKQECQKAQAALTGRKFANRTVVTSYYDPDLYH 518
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 253 IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLG--------------QPVMVKPSEA 298
++ R K ++EF V A+AL G ++ G Q ++ P+
Sbjct: 261 VLSVYINRDKLFAFVEFRTVEEASNAMALDGVVMAGSQLRVRRPNDYQPQQAALIGPTTP 320
Query: 299 EKNLVQSNTSAGGTATGPYG-AIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI 357
+L N +A G G G + RKLYVGNL +TE Q+ +L + FG V+ L +D
Sbjct: 321 ADSL---NLAAVGLIPGVNGQSSGRKLYVGNLPPYLTELQVLELLQSFGAVQAFNLVVDK 377
Query: 358 ETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+TG KG+GF ++A +AA L G
Sbjct: 378 DTGTLKGYGFFEYADAAADEAAMEGLTG 405
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 496 SPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV---------DKRSAG 546
S SEC+ L NM TDP EI D +EEC+ +G + + + D G
Sbjct: 451 SASECVRLTNMVTREELTDPTEAREILEDTQEECAGFGELTRVVMPLPRRTRLEDPAGVG 510
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFM 580
V+L F E AA A R+++ R FA R++SA F+
Sbjct: 511 EVFLLFADAEGAARAVRSLNGRKFADRVVSAGFI 544
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 21 QDDDSSSKKKAKRE---EKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRD 77
+D D SK RE ++ ++ + E +++ E++K R R R + + G R+R
Sbjct: 260 KDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRERA 319
Query: 78 RDRDRDKERHRRDRDRDRDRGRERERETE------RDRERSRERREKEKERERRERRDRE 131
R+ D+D+ER +D D+DR+R ++R++E E +DRER+RE +KEKE++R R+D++
Sbjct: 320 RESDKDRERSAKDGDKDRERDKDRDKEKEKDGKDSKDRERTRE-GDKEKEKDRERRKDKD 378
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRE----RERESERERELELERERERERE 187
R GE+ R R S R R +R+ R+R+ E+ REL R R + +
Sbjct: 379 GAGHRRGGGEKSKRDRDRDRDRDSSREGGREKRDKGGRRDRDKEKVRELLDARTRGLDID 438
Query: 188 LRERER 193
LR+ R
Sbjct: 439 LRKLSR 444
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 88/144 (61%), Gaps = 20/144 (13%)
Query: 78 RDRDRDKERHRRDRDRD-RDRGRERERETERD------RERSRERREKEKERERRERRDR 130
RD D +K+R R D+DR+ +D G R ++ ++D RER+R+ ++K+K+R R +DR
Sbjct: 234 RDGDSNKDRERGDKDRESKDGGGGRTKDGDKDSKDSKDRERTRDEKDKDKDRSERGDKDR 293
Query: 131 EKERERERD-GERRSSS-------RSRRSSSQSRRSSSRSRRERERESERERELELE--- 179
EK+++R +D GER S R+R S RS+ ++RER+ +R++E E +
Sbjct: 294 EKDKDRHKDRGERGDKSDGGKDRERARESDKDRERSAKDGDKDRERDKDRDKEKEKDGKD 353
Query: 180 -REREREREL-RERERDLEMRESR 201
++RER RE +E+E+D E R+ +
Sbjct: 354 SKDRERTREGDKEKEKDRERRKDK 377
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 34/168 (20%)
Query: 44 REDSEEEEEEEKSRSGK----RSRRDEDEEN---GSRRDRDRDRD----RDKERHRRDRD 92
RE E ++E SR G R R D+D E+ G R +D D+D +D+ER R ++D
Sbjct: 221 RERPSESDKERVSRDGDSNKDRERGDKDRESKDGGGGRTKDGDKDSKDSKDRERTRDEKD 280
Query: 93 RDRDRGRERERETERDRERSRERRE--------KEKERERRERRDREK-----ERERERD 139
+D+DR +++ E+D++R ++R E K++ER R +DRE+ +++RERD
Sbjct: 281 KDKDRSERGDKDREKDKDRHKDRGERGDKSDGGKDRERARESDKDRERSAKDGDKDRERD 340
Query: 140 GERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+R + + + ++RER E ++E E +RER ++++
Sbjct: 341 KDR----------DKEKEKDGKDSKDRERTREGDKEKEKDRERRKDKD 378
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 43/194 (22%)
Query: 10 EKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEE 69
EK ++ R ++ D D K K + +++ ER + + E E + +RS +D D
Sbjct: 278 EKDKDKDRSERGDKDRE-KDKDRHKDRGERGDKSDGGKDRERARESDKDRERSAKDGD-- 334
Query: 70 NGSRRDRDRDRDRDKERHR-------RDRDRDRDRGRERERETERDRERSRERR---EKE 119
+DR+RD+DRDKE+ + R+R R+ D+ +E++RE +D++ + RR EK
Sbjct: 335 ----KDRERDKDRDKEKEKDGKDSKDRERTREGDKEKEKDRERRKDKDGAGHRRGGGEKS 390
Query: 120 KE---------------RERRE---RRDREKERERE--------RDGERRSSSRSRRSSS 153
K RE+R+ RRDR+KE+ RE D + R SRS +S
Sbjct: 391 KRDRDRDRDRDSSREGGREKRDKGGRRDRDKEKVRELLDARTRGLDIDLRKLSRSATINS 450
Query: 154 QSRRSSSRSRRERE 167
S SS R++E
Sbjct: 451 ASSASSRMPSRKKE 464
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 39/229 (17%)
Query: 192 ERDLEMRES--RRY-KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVR 248
+ D+EM ++ + Y K K V P +T+F + + DV FF +AG+V
Sbjct: 359 DTDVEMADADMKSYVKTPKTPVTPVTSENAGSKTLFVGNLSFQVERADVENFFKEAGEVA 418
Query: 249 DVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTS 308
DVR +D + +R KG G++EF + A+ +G+ LLG+ V + + E+ SNT
Sbjct: 419 DVRFALDAD-QRFKGFGHVEFTTTEAALKALNFNGKSLLGRDVRLDLAR-ERGERTSNT- 475
Query: 309 AGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGP-----------------VELV 351
PY G ++T K F+ FG + +
Sbjct: 476 -------PYSKDSNSFQKGGR--GQSQTIFVKGFDKFGAEDEIRSSLQEHFGSCGEISRI 526
Query: 352 QLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVT 400
+P D ETG KG +++F + A+N E+ G L S +T
Sbjct: 527 SIPTDYETGAIKGMAYLEFNDAD-------AMNKAFELNGSQLGESYLT 568
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 91/236 (38%), Gaps = 56/236 (23%)
Query: 166 RERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFA 225
+ ES++ T+F
Sbjct: 231 KTEESDK-----------------------------------------------PSTLFV 243
Query: 226 YQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQ 284
+ + + E F G V R+I DR S RSKG GY++F A G
Sbjct: 244 GNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAEKAHGEKQGA 303
Query: 285 LLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI----DRKLYVGNLHFNMTETQLRK 340
+ G+ + V S + SN +AG A YG L+VGNL F+ E +
Sbjct: 304 FIDGREIKVDFSTGK--ATNSNDAAGARAK-KYGDTVSPESDTLFVGNLPFDADEDSVGA 360
Query: 341 LFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
F V+ ++LP + E+G+ KGFG+V F +E AK+A LNG+ I GR ++
Sbjct: 361 FFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQ-SINGRNCRL 415
>gi|328785951|ref|XP_003250682.1| PREDICTED: hypothetical protein LOC411091 [Apis mellifera]
Length = 642
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 34/201 (16%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL--IMDRNSRRSKGVG----------- 265
D++T+F +P T++ + + F + GK+ +RL + +++ SK V
Sbjct: 356 DEKTIFVGNLPKDVTKKKLKKIFKQFGKIDTIRLRGKIAKSANVSKRVAAIKNELHPKLK 415
Query: 266 ----YIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAID 321
YI+F SV +++++G G + V S +N S S
Sbjct: 416 SVYAYIKFVSKESVKESLSMNGTEFEGNYLRVNASNKSENKFDSKKS------------- 462
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+++GNLH+N+ + + K F+ G +E V++ D +TG KGFG+V F E A
Sbjct: 463 --IFLGNLHYNIDDNTIIKHFKQCGEIESVRVIRDNKTGVGKGFGYVNFKN-EDAVTLAL 519
Query: 382 ALNGKLEIVGRTLKVSSVTDH 402
L+G I R ++V V D
Sbjct: 520 ELDG-TTISNREVRVKPVVDQ 539
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA- 280
T++ + + +YE F G V R++ D++S RS+G GY++F + + A
Sbjct: 297 TLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGFGYVDFENPDAAEKAYNE 356
Query: 281 LSGQLLLGQPVMVKPSEAEKNLVQSNTSA--------GGTATGPYGAIDRKLYVGNLHFN 332
+G L G+ + + A K + SA G P L+VGNL F+
Sbjct: 357 KNGAFLQGREMRL--DFASKPNADAPPSARAAERARKHGDVISPE---SDTLFVGNLPFS 411
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
E + K F V+ +++P D E+G+ KGF +V F+ +E AK A LNG ++ GR
Sbjct: 412 ADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVEDAKKAFETLNGS-DLDGR 470
Query: 393 TLKV 396
+++
Sbjct: 471 PVRL 474
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 57/199 (28%)
Query: 144 SSSRSRRSSSQSRRSSS---------------------------RSRRERERESERERE- 175
+S++ +S ++ SS +R +++S R R
Sbjct: 280 TSAKKTKSDGEASEKSSTLWVGNLGWGVDDNALYEEFQHVGGVVGARVVTDKDSGRSRGF 339
Query: 176 --LELERERERERE--------LRERERDLEM------------RESRRYKEKKEVVEPE 213
++ E E+ L+ RE L+ R + R ++ +V+ PE
Sbjct: 340 GYVDFENPDAAEKAYNEKNGAFLQGREMRLDFASKPNADAPPSARAAERARKHGDVISPE 399
Query: 214 ADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVM 273
+D T+F +P A E V +FF+KA KV+ +R+ D+ S R KG Y+ F V
Sbjct: 400 SD------TLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVE 453
Query: 274 SVPMAI-ALSGQLLLGQPV 291
A L+G L G+PV
Sbjct: 454 DAKKAFETLNGSDLDGRPV 472
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 56/249 (22%)
Query: 163 RRERERES----ERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPER 218
+R+ E ES ++ ++ E E
Sbjct: 235 KRKAEEESASTPKKSKQAEEETGA------------------------------------ 258
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
+F + E + + F G++ VR++ DR+S RS+G GY+E+ A
Sbjct: 259 -SANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKA 317
Query: 279 IA------LSGQLL-----LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVG 327
L G+ + G+P + ++ Q+ + G + P L+VG
Sbjct: 318 YKAKKDTELDGRKINLDYATGRPANNQQGGGFQDRAQARARSFGDQSSPE---SDTLFVG 374
Query: 328 NLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKL 387
NL F+ E +++LF G + ++LP D ++G+ KGFG+VQFA ++ A+ A ++LNG
Sbjct: 375 NLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFGYVQFASVDEAREAFNSLNG-A 433
Query: 388 EIVGRTLKV 396
E+ GR +++
Sbjct: 434 ELDGRPVRL 442
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 23 DDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDR 82
+DS KK + +++ +R+RE +E++E +SR +R + +D+ RD+ RD+ R
Sbjct: 7 EDSDLKKSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-R 65
Query: 83 DKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDRE 131
DKER R RD +RDR RER ++ E++R+R E R+ E+E+ER RD+E
Sbjct: 66 DKERTRSSRDDERDRARERTKDREKERDRDHEGRDAEREKER--ERDKE 112
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 37/130 (28%)
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRERERETERDR---ER 111
K+S RD D NG R R+R+RD++K+ HR R +R D+ RE+ER+ RD+ ER
Sbjct: 12 KKSHRDRDR-NGERH-RERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKER 69
Query: 112 SRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESE 171
+R R+ E++R R +DREKER+R+ +G R++E
Sbjct: 70 TRSSRDDERDRARERTKDREKERDRDHEG---------------------------RDAE 102
Query: 172 RERELELERE 181
RE+E E ++E
Sbjct: 103 REKERERDKE 112
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 17/146 (11%)
Query: 63 RRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKER 122
RRD+D E RD+ RD+DR++ RDRD R++GRE R++ DR R RE +E+E+ R
Sbjct: 327 RRDKDRERSRERDQRRDKDRERS---RDRDLRREKGREGSRDSSVDRYRRRE-KEQERSR 382
Query: 123 ERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR---SRRERERESERERELELE 179
+R RD ++++++ER + R R +R Q RS R + R RERE R RE EL+
Sbjct: 383 DREVDRDLKRQKQQERSWD-REVDRDQRKERQWERSLDREMINDRRREREQGRSREEELD 441
Query: 180 RERERERE---------LRERERDLE 196
++R++E++ ER+RD E
Sbjct: 442 KKRQKEKDRSKDKSMSRANERDRDWE 467
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 11/161 (6%)
Query: 32 KREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERH-RRD 90
+RE+ ERS + D +++ E+SR + RRD+D E R RDRD R+K R RD
Sbjct: 313 RREQGRERS--RERDQRRDKDRERSRE-RDQRRDKDRE----RSRDRDLRREKGREGSRD 365
Query: 91 RDRDRDRGRERERETERDRERSRE-RREKEKER--ERRERRDREKERERERDGERRSSSR 147
DR R RE+E+E RDRE R+ +R+K++ER +R RD+ KER+ ER +R +
Sbjct: 366 SSVDRYRRREKEQERSRDREVDRDLKRQKQQERSWDREVDRDQRKERQWERSLDREMIND 425
Query: 148 SRRSSSQSRRSSSRSRRERERESERERELELEREREREREL 188
RR Q R ++R++E +R ++ + R ER+R+
Sbjct: 426 RRREREQGRSREEELDKKRQKEKDRSKDKSMSRANERDRDW 466
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 53/227 (23%)
Query: 160 SRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERD 219
++ ++ E E EP
Sbjct: 158 NKKQKNEETE-----------------------------------------EPA------ 170
Query: 220 QRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
T+F ++ + + + F G V R+I +R + RS+G GY++F + AI
Sbjct: 171 --TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAI 228
Query: 280 A-LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQL 338
+ G+ + G+P+ S ++ +N A P D L++GNL FN +
Sbjct: 229 QEMQGKEIDGRPINCDMSTSKP--AGNNDRAKKFGDTPSEPSDT-LFLGNLSFNADRDAI 285
Query: 339 RKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+LF G V V++P ET Q KGFG+VQF+ +E AK A AL G
Sbjct: 286 FELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQG 332
>gi|145501258|ref|XP_001436611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403752|emb|CAK69214.1| unnamed protein product [Paramecium tetraurelia]
Length = 3975
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 114/182 (62%), Gaps = 10/182 (5%)
Query: 15 EQRQQKQDDDSSSKKKAKREEK-----SERSYRKREDSEEEEEEEKSRSGKRSRRDEDEE 69
EQ +QKQ D +S K++ K++++ +E+ +K++D +++E+ K + R+ D +++
Sbjct: 606 EQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRT-SDNEQD 664
Query: 70 NGSRRDRDRDRDRDKERHR---RDRDRDRDRGRERERETERDRERSRER-REKEKERERR 125
++DR +D+++DK++ + D+++D+ + ++R + E+D+++ ++R ++KE+ ++++
Sbjct: 665 KQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQ 724
Query: 126 ERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERE 185
+ R + E+++++ +R + Q R S + R++ ++ +++E + ++++ R
Sbjct: 725 QDRTSDNEQDKQQQQDRTQDKEQNKQKQQDRTSDNEQDRQKSQDRTQDKEQDKQKQQGRT 784
Query: 186 RE 187
++
Sbjct: 785 QD 786
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 126/211 (59%), Gaps = 12/211 (5%)
Query: 15 EQRQQKQDDDSSS-----KKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEE 69
EQ +QKQ D +S +K+ +R + E++ +K++D ++E++K + R+ +E +
Sbjct: 578 EQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQD- 636
Query: 70 NGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD 129
+ + +DR +DKE++++ + +DR E++++ ++DR + +E+ +K+K+++R ++
Sbjct: 637 ----KQKQQDRTQDKEQNKQ-KQQDRTSDNEQDKQQQQDRTQDKEQ-DKQKQQDRTSDKE 690
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
++K+++++R + + ++ +Q + + + +++R ++E++++ + +R +++E+ +
Sbjct: 691 QDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQNKQ 750
Query: 190 ERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
+++ E R K + + E D ++ Q
Sbjct: 751 KQQDRTSDNEQDRQKSQDRTQDKEQDKQKQQ 781
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 105/178 (58%), Gaps = 22/178 (12%)
Query: 15 EQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRR 74
EQ +QKQ D +S K++ K+ K++D + E++K K+ R +D+E +
Sbjct: 564 EQDKQKQQDRTSDKEQDKQ---------KQQDRTSDNEQDKQ---KQQERTQDKE--QNK 609
Query: 75 DRDRDRDRDKERHR---RDRDRDRDRGRERERETERDRERSRERRE-----KEKERERRE 126
+ +DR DKE+ + +DR D ++ ++++++ +D+E+++++++ E+++++++
Sbjct: 610 QKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQ 669
Query: 127 RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERER 184
R ++KE+++++ +R S + Q R S + ++++++ +++E +++++R
Sbjct: 670 DRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDR 727
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/153 (17%), Positives = 96/153 (62%), Gaps = 6/153 (3%)
Query: 74 RDRDRDRDRDKERHRR-DRDRDRDRGRERERETERDRERSRER-----REKEKERERRER 127
R +D+++D+ K++ R D+++D+ + ++R + E+D+++ +ER + K+K+++R
Sbjct: 559 RTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSD 618
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
++++K+++++R + + ++ +Q + + + +++R ++E++++ + +R +++E++
Sbjct: 619 KEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQD 678
Query: 188 LRERERDLEMRESRRYKEKKEVVEPEADPERDQ 220
++++ +E + K++ + E D ++ Q
Sbjct: 679 KQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQ 711
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/143 (17%), Positives = 91/143 (63%), Gaps = 9/143 (6%)
Query: 45 EDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERE 104
+D E+++++++ R+ D++++ ++DR D ++DK++ +++R +D+++ ++++++
Sbjct: 561 QDKEQDKQKQQDRTS-----DKEQDKQKQQDRTSDNEQDKQK-QQERTQDKEQNKQKQQD 614
Query: 105 TERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRR 164
D+E+ ++K+++R +D++K+++R +D E+ + R+S + + R
Sbjct: 615 RTSDKEQD---KQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDR 671
Query: 165 ERERESERERELELERERERERE 187
+++E +++++ + ++E++++
Sbjct: 672 TQDKEQDKQKQQDRTSDKEQDKQ 694
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 103 RETERDRERSRERREKEKERERRERRDRE-KERERERDGERRSSSRSRRSSSQSRRSSSR 161
+E ++ R+ ++ EK+ ER+ +RR+ E K +RE G+ + ++ + ++
Sbjct: 320 QEAQKKMHRAEKKAEKKAERQAEKRREAEAKVFQRETPGQAKRKAQPPEEPPDPQEQATD 379
Query: 162 SRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+ + +E ++++ E+ E +E + EVV+P DP ++ R
Sbjct: 380 KDGFKVPSVPAAKATAVEEPPSKKQKTEGEEQGEEKKEK---PKHGEVVKP--DPLKEIR 434
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
TVF + E + E F + G++ ++RL+ D RSKG GY+ F + SV A+
Sbjct: 435 TVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKG-RSKGFGYLVFTHMQSVEAALKR 493
Query: 282 SGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 341
+ G+PV V E+N + T G KL+V + F++TE +L +L
Sbjct: 494 DRTPVNGRPVFVSKCN-ERNQFRFRT----------GMEKNKLFVKGIPFSVTEKELEEL 542
Query: 342 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
F +G ++ V+L + G KG +V++A A A +G + + TL+V+
Sbjct: 543 FGKYGELKGVRL-VTYRNGHSKGIAYVEYANETSATVALVQTDG-MAMGDHTLQVA 596
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 139/296 (46%), Gaps = 20/296 (6%)
Query: 103 RETERDRERSRERREKEKERERRERRDRE-KERERERDGERRSSSRSRRSSSQSRRSSSR 161
+E ++ R+ ++ EK+ ER+ +RR+ E K +RE G+ + ++ + ++
Sbjct: 552 QEAQKKMHRAEKKAEKKAERQAEKRREAEAKVFQRETPGQAKRKAQPPEEPPDPQEQATD 611
Query: 162 SRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQR 221
+ + +E ++++ E+ E + + EVV+P DP ++ R
Sbjct: 612 KDGFKVPSVPAAKATAVEEPPSKKQKTEGEEQG---EEKKEKPKHGEVVKP--DPLKEIR 666
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
TVF + E + E F + G++ ++RL+ D RSKG GY+ F + SV A+
Sbjct: 667 TVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKG-RSKGFGYLVFTHMQSVEAALKR 725
Query: 282 SGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKL 341
+ G+PV V E+N + T G KL+V + F++TE +L +L
Sbjct: 726 DRTPVNGRPVFVSKCN-ERNQFRFRT----------GMEKNKLFVKGIPFSVTEKELEEL 774
Query: 342 FEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVS 397
F +G ++ V+L + G KG +V++A A A +G + + TL+V+
Sbjct: 775 FGKYGELKGVRL-VTYRNGHSKGIAYVEYANETSATVALVQTDG-MAMGDHTLQVA 828
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 296 SEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPL 355
+E EK+L SA T G I L+V NL + TE L +LF FG ++ +++
Sbjct: 145 NEDEKDLSFMEDSAHPTEGGDQTDIPPALFVANLEWWTTEQNLEQLFSEFGKLKNLKIFE 204
Query: 356 DIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTDHVGTQ 406
+ G+ KG+ FV+ + A+ A+ LN K E+ G+T+ + S+ H Q
Sbjct: 205 NETNGKSKGYAFVELQSHDIARQAKEKLNNK-ELNGKTIIIKSMNQHTYQQ 254
>gi|395536556|ref|XP_003770280.1| PREDICTED: TRAF3-interacting protein 1 [Sarcophilus harrisii]
Length = 691
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDED 67
+ K EE+R + D S S+++ +REE + ++RE + ++E EKS+ R R +D D
Sbjct: 138 IHKEKEEKRNSEIKDRSPSRERKQREEGKDEESKQRE-KDRDKEREKSKENDRERHKDPD 196
Query: 68 EENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRER 127
+ +RDR+++R K+ R++ RD+DRG ++RE ERD+E+ + + + KE+ER +
Sbjct: 197 RDKVKDGERDRNKNRAKQEREREKSRDKDRG-PKDRELERDKEKDK-KNDSGKEKERLKE 254
Query: 128 RDREKERERERDGER 142
RDRE+E+E+ +D +R
Sbjct: 255 RDREREKEKGKDKDR 269
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%), Gaps = 37/226 (16%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE-DEENGSRRDRDRDRDRDKERHRRDRDR 93
E+ R ++++E+ E +++S S +R +R+E +E +R++DRD++R+K + DR+R
Sbjct: 133 EEEPRIHKEKEEKRNSEIKDRSPSRERKQREEGKDEESKQREKDRDKEREKSKEN-DRER 191
Query: 94 DRDRGRERERETERDRERSRERREKEKERERRERRDRE---KERERERDGERRSSSRSRR 150
+D R++ ++ ERDR ++R ++E RER + RD++ K+RE ERD E+
Sbjct: 192 HKDPDRDKVKDGERDRNKNRAKQE----REREKSRDKDRGPKDRELERDKEK-------- 239
Query: 151 SSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVV 210
+++ S +ER +E +RERE E ++++R++ RER +D E + EK ++
Sbjct: 240 ----DKKNDSGKEKERLKERDREREKEKGKDKDRDKR-RERVKD---GEHSKEHEKDKIK 291
Query: 211 EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDR 256
E E ++ TV ++ + FS++ V+D R+ MDR
Sbjct: 292 EQEKTEKKAAGTV-----------ENLSKKFSEST-VKDPRMEMDR 325
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 23/134 (17%)
Query: 43 KREDSEEEEEEEKSRSGKRSRRDED---------EENGSRRDRDRDRDRDKERHR-RDRD 92
+R D E+E + RS K RR+++ +E +D+ R R++D+ERH RD+D
Sbjct: 186 RRRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKD 245
Query: 93 RDRDRGRERERETERDRERSRER-REKEKERERR------------ERRDREKERERERD 139
++RDR ER+++ ERDRER ER ++KEK+R+R ++R R KER+RER+
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRGRGKERQRERN 305
Query: 140 GERRSSSRSRRSSS 153
E ++S SS+
Sbjct: 306 KEPEERNKSGESSN 319
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 82/132 (62%), Gaps = 8/132 (6%)
Query: 63 RRDEDEENGSRRDR-DRDRDRDKERHRRDR--DRDRDRGRERERETERDRERSRERREKE 119
RRD ++E+ R+R D+ + R++E H +D+ +++RD+ +++ R E+DRER E R+K+
Sbjct: 187 RRDGEKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHE-RDKD 245
Query: 120 KERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELE 179
KER+R RD+++ER+RER ER R R S + ER+++ +R R E +
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDR----DRHHDSHAAPERDKDKQRGRGKERQ 301
Query: 180 RERERERELRER 191
RER +E E R +
Sbjct: 302 RERNKEPEERNK 313
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 38/186 (20%)
Query: 25 SSSKKKAKREEKSERSYRK---------REDSEEEEEEEKSRSGKRSRRDED---EENGS 72
S +KK++REEK R + +E +E ++ EK R R RR ED E
Sbjct: 48 SKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDEREKDR 107
Query: 73 RRDRDRDRDRDKERHR---RDRDRDR-------------------DRGRERERETERDRE 110
RD+ R++D D+E++R R+RD+DR DRGR++ER E++R+
Sbjct: 108 NRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRD 167
Query: 111 RSRERREKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERE 169
R +ER EKER+R + RDREKE+E+ +D E+ R + + R + + R++ERE
Sbjct: 168 RDKER---EKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKERE 224
Query: 170 SERERE 175
++++R+
Sbjct: 225 ADQDRD 230
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 20/178 (11%)
Query: 65 DEDEENG-----SRRDRDRDRDRDKERHRRDRDRDRDRG----RERERET---ERDRERS 112
D+ EENG R +DR + R +E+ R +DR+R + +ERE+ET E+DR S
Sbjct: 33 DDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTS 92
Query: 113 RERR-----EKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRER 166
RERR E+EK+R R + R+++ +RE+ RD ER R R R + R +E
Sbjct: 93 RERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKES 152
Query: 167 ERESERERELELEREREREREL-RERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R ++ER E R+R++ERE R+R +D + RE + K K E E D +RD+ +
Sbjct: 153 DRGRDKERGKEKNRDRDKEREKERDRTKDRD-REKEKEKSKDREKERENDKDRDRDAI 209
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 15/100 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVEE D SSKKK +KSERSYRK +++ + R K
Sbjct: 1 MDFDEYEYLEKTVEE-------DIDSSKKKKDVTDKSERSYRKPR-DVDDDLDADDRKSK 52
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKE------RHRRDRDRD 94
RSR D DE GS+RDRDRDR+RD++ RHR +R+RD
Sbjct: 53 RSRVD-DENGGSKRDRDRDRERDRDRERSSGRHRSERERD 91
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 38/186 (20%)
Query: 25 SSSKKKAKREEKSERSYRK---------REDSEEEEEEEKSRSGKRSRRDED---EENGS 72
S +KK++REEK R + +E +E ++ EK R R RR ED E
Sbjct: 48 SKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDEREKDR 107
Query: 73 RRDRDRDRDRDKERHR---RDRDRDR-------------------DRGRERERETERDRE 110
RD+ R++D D+E++R R+RD+DR DRGR++ER E++R+
Sbjct: 108 NRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEKNRD 167
Query: 111 RSRERREKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRERERE 169
R +ER EKER+R + RDREKE+E+ +D E+ R + + R + + R++ERE
Sbjct: 168 RDKER---EKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKERE 224
Query: 170 SERERE 175
++++R+
Sbjct: 225 ADQDRD 230
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 20/178 (11%)
Query: 65 DEDEENG-----SRRDRDRDRDRDKERHRRDRDRDRDRG----RERERET---ERDRERS 112
D+ EENG R +DR + R +E+ R +DR+R + +ERE+ET E+DR S
Sbjct: 33 DDLEENGIEKSSKHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTS 92
Query: 113 RERR-----EKEKERERRERRDREKERERERDGER-RSSSRSRRSSSQSRRSSSRSRRER 166
RERR E+EK+R R + R+++ +RE+ RD ER R R R + R +E
Sbjct: 93 RERRKEDRDEREKDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKES 152
Query: 167 ERESERERELELEREREREREL-RERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
+R ++ER E R+R++ERE R+R +D + RE + K K E E D +RD+ +
Sbjct: 153 DRGRDKERGKEKNRDRDKEREKERDRTKDRD-REKEKEKSKDREKERENDKDRDRDAI 209
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 17/96 (17%)
Query: 59 GKRSRRDEDEENGSRRDRDRDRDRDKERHR-------RDRDRDRDR-------GRERERE 104
GK RD D+E RDR +DRDR+KE+ + R+ D+DRDR G+ER R+
Sbjct: 161 GKEKNRDRDKEREKERDRTKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRD 220
Query: 105 TERDRERSRERREKEKERERRERRDREKERERERDG 140
ER+ ++ R+R K+R++ R++R++ +R +DG
Sbjct: 221 KEREADQDRDRY---KDRDKGSRKNRDEGHDRSKDG 253
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 312 TATG-PYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
TG PY + L+V L++ TE+++++ FE +GP++ V+L D TG+ KG+ F+++
Sbjct: 131 NVTGDPY----KTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEY 186
Query: 371 AQLEHAKAAQSALNGKLEIVGRTLKV 396
KAA +G+ +I GR + V
Sbjct: 187 MHKRDMKAAYKQADGR-KIDGRRVLV 211
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 60 KRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR------DRGRERERETERDRERSR 113
K RD D+E + ++++RDRD++KER RDRD++R +R R++E+ E++R+R +
Sbjct: 677 KEKERDRDKERHTEKEKERDRDKEKER-DRDRDKERHIEKEKERDRDKEKHIEKERDRDK 735
Query: 114 ERR-EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR 161
+R EKEKER++ + RDR+++ RE + ++ S++ + S+
Sbjct: 736 DRHIEKEKERDKAKDRDRKQKMLRENCSRNLADLHTKPDSTRLKHDGSK 784
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 60/191 (31%)
Query: 15 EQRQQKQDDDSSSK------------------KKAKREEKSERSYRKREDSEE----EEE 52
E + + D SSK K +EEK+ S+R E+ E +
Sbjct: 578 ESKHRHDDKSDSSKGPSDDRRPDPRQKHDKHSKSRHKEEKNHNSHRMLENRPETPKNTSK 637
Query: 53 EEKSRSG--------------------------------KRSRRDEDEENGSRRDRDRDR 80
E+SR G K RD D+E + ++++RDR
Sbjct: 638 TERSRHGEDKGRDRDRDKDRERHKDRDRARDRDKERNIEKEKERDRDKERHTEKEKERDR 697
Query: 81 DRDKERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDREKERERE 137
D++KE RDRDRD++R E+E+E +RD+E+ E+ R+K++ E+ + RD+ K+R+R+
Sbjct: 698 DKEKE---RDRDRDKERHIEKEKERDRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRK 754
Query: 138 RDGERRSSSRS 148
+ R + SR+
Sbjct: 755 QKMLRENCSRN 765
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 498 SECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYV------DKRSAGF--VY 549
S L L NM P D D EI+ DV EEC K+G V + + +++SAG +Y
Sbjct: 484 SRVLQLLNMVTPEELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQSAGVGKIY 543
Query: 550 LRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYEAK 588
++FE E+A A RA+ R F+ R + + E+YE
Sbjct: 544 VKFEQVESATKALRALAGRKFSDRTVVTTYFPEENYEVN 582
>gi|384249020|gb|EIE22503.1| hypothetical protein COCSUDRAFT_56177 [Coccomyxa subellipsoidea
C-169]
Length = 2243
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 26/188 (13%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEK-SRSGKRSRRDEDEENGSRRDRDRD---- 79
S+S + R+E + S RK E E +E +R +S +D+D+ + R+ DR+
Sbjct: 680 STSDRGNSRDEGN--SKRKHEPVRWEPGQEGGARKKSKSDQDKDDRHKDRKSHDREGGHK 737
Query: 80 ----------RDRDKERHR---RDRDRDRDRGRERERETERDR--ERSRERREKEKERER 124
+DRD+E+ + R++DRDRD G++R R+ ER + E +R KEK+RER
Sbjct: 738 EKKRKHKEKDKDRDREKDKEKDREKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRER 797
Query: 125 RERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERER 184
RR E++RE+D E+ + + R ++ ERE E R +E + R++
Sbjct: 798 DSRR----EKDREKDREKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQ 853
Query: 185 ERELRERE 192
E+ R +E
Sbjct: 854 EQAQRSKE 861
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 28/166 (16%)
Query: 63 RRDEDEENGSRR----DRDRDRDRDKERHRRDRD----------------RDRDRGRERE 102
R + +E G+R+ D+D+D DR K+R DR+ RDR++ +E++
Sbjct: 701 RWEPGQEGGARKKSKSDQDKD-DRHKDRKSHDREGGHKEKKRKHKEKDKDRDREKDKEKD 759
Query: 103 RETERDRERSRER-REKEKERERRERRDRE-KERERERDGERRSSSRSRRSSSQSRRSSS 160
RE +RDR+ ++R R+KE+ + DR+ KE++RERD R R + R
Sbjct: 760 REKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREKDREKDREKERQREREK 819
Query: 161 RSRRERERESERERELELERERERERE-LRERERDLEMRESRRYKE 205
R+RER +E+ E E+E R E L+ R+++ +++R KE
Sbjct: 820 EKVRDRERAAEKSHRSEREKESRRSVEALKSRDQE----QAQRSKE 861
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 45/171 (26%)
Query: 23 DDSSSKKK---AKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSR------ 73
D+ +SK+K + E E RK+ S++++++ + R+ D E G +
Sbjct: 689 DEGNSKRKHEPVRWEPGQEGGARKKSKSDQDKDDRH-----KDRKSHDREGGHKEKKRKH 743
Query: 74 ------RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRER 127
RDR++D+++D+E+ R DRD +DR R++ER + + R+R+EK++ER+ R
Sbjct: 744 KEKDKDRDREKDKEKDREKDR-DRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRRE 802
Query: 128 RDREKE------------------------RERERDGERRSSSRSRRSSSQ 154
+DREK+ ER+ E R S + +S Q
Sbjct: 803 KDREKDREKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQ 853
>gi|66811328|ref|XP_639372.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60468005|gb|EAL66016.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 952
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
LY+ L + T+ QL +F FG + +++ + G+ KG+ FV+F +E A+ A+S
Sbjct: 165 LYISGLEWWTTDQQLENVFLEFGKIVTLKIFENENNGKSKGYAFVEFEHIEQAQLAKSKT 224
Query: 384 NGKLEIVGRTLKV 396
K EI G+ + +
Sbjct: 225 E-KKEINGKEMTI 236
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 28/206 (13%)
Query: 10 EKTVEEQRQQKQD-------DDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRS 62
E+ + E+R+ KQD DSS +K+ K+ +KS+R YR R +S E+ ++R +S
Sbjct: 317 EQLLSERRRNKQDVVSPDCNSDSSIQKRTKKSQKSQRHYRARANSNSSSEQPRNRHRSKS 376
Query: 63 RRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETE----RDRERSRE-RRE 117
R N +D++R+KE+ R +DR RDRG++R+R E +DR RSRE R+
Sbjct: 377 RSRSRSINNYDCGNSKDKERNKEKRSRSKDRQRDRGQDRDRSREGYRGQDRARSREGERD 436
Query: 118 KEKERERRERRDREKE------RERERDGER-RSSSRSRRSSSQSRRSSSRSR------- 163
+ +E R + RDR +E R+R +G+R RS R+R S + R R R
Sbjct: 437 RSREGNRGQDRDRNREGYRGQDRDRSPEGDRERSRERNRDRSREGNRGQDRDRNQEGYRG 496
Query: 164 --RERERESERERELELERERERERE 187
R+R RE +RER E R R ++R+
Sbjct: 497 QDRDRSREGDRERSKEKNRGRGQDRD 522
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+++G + +TE + +F +G + + L D +TG+ KGF F+ + A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 384 NGKLEIVGRTLKVSSVTDH 402
NG ++I GRT++V V ++
Sbjct: 98 NG-IKIKGRTIRVDHVANY 115
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 72/117 (61%), Gaps = 10/117 (8%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERR---EKEKERERRERRDR 130
R+RDR R RD ER R +RD GR+R+ E +R+RER R+ E+++ER+ +RD
Sbjct: 267 RERDRGRQRDGERQR-----ERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDG 321
Query: 131 EKERERERDGER-RSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERERERE 185
E++RERERDG R R R R R R +ERER+ R+R+ E +RERER+
Sbjct: 322 ERDRERERDGGRQRDGDRDREQERDGGRQRDVERDQERERDGGRQRDGERDRERERD 378
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-AL 281
VF P + TE D+ FS+ G++ ++ L+ D+ + +SKG ++ + D S +A+
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 282 SGQLLLGQPVMV 293
+G + G+ + V
Sbjct: 98 NGIKIKGRTIRV 109
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 29/148 (19%)
Query: 48 EEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKER---HRRDRDRDRDRGRERERE 104
E E + + R G+R R E +G R+ RD ++DR++ER +RD +R R+R R+R+
Sbjct: 266 ERERDRGRQRDGERQR----ERDGGRQ-RDGEKDRERERDGGRQRDGERQRERDGGRQRD 320
Query: 105 TERDRERSRER-------REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRR 157
ERDRER R+ R++E+ER+ +RD E+++ERERDG R +R
Sbjct: 321 GERDRERERDGGRQRDGDRDREQERDGGRQRDVERDQERERDGGR-------------QR 367
Query: 158 SSSRSRRERERESERERELELERERERE 185
R RERER+ R+R+ +R+RER+
Sbjct: 368 DGERD-RERERDGGRQRDGVRDRKRERD 394
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+++G + +TE + +F +G + + L D +TG+ KGF F+ + A
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 384 NGKLEIVGRTLKVSSVTDH 402
NG ++I GRT++V V ++
Sbjct: 98 NG-IKIKGRTIRVDHVANY 115
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 99 RERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
RER+RE ERD ++ RER ++ ++R+ +RD EK+RERERDG R+ +R R+
Sbjct: 253 RERDREGERDGDKERER-DRGRQRDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQR 311
Query: 159 SSRSRRERERESERERELELERERERERELRERERDLE 196
RERER+ R+R+ + +RE+ER+ R+RD+E
Sbjct: 312 DGERDRERERDGGRQRDGDRDREQERD---GGRQRDVE 346
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 13/100 (13%)
Query: 49 EEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR---RDRDRDRDRGRERERET 105
E ++ E+ R G+ RD D+E R+RDR R RD R R +DR+R+RD GR+R+ E
Sbjct: 249 ETQQRERDREGE---RDGDKE----RERDRGRQRDGGRQRDGEKDRERERDGGRQRDGER 301
Query: 106 ERDRERSRER---REKEKERERRERRDREKERERERDGER 142
+R+R+ R+R R++E+ER+ +RD +++RE+ERDG R
Sbjct: 302 QRERDGGRQRDGERDRERERDGGRQRDGDRDREQERDGGR 341
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-AL 281
VF P + TE D+ FS+ G++ ++ L+ D+ + +SKG ++ + D S +A+
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIANINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97
Query: 282 SGQLLLGQPVMV 293
+G + G+ + V
Sbjct: 98 NGIKIKGRTIRV 109
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 58/244 (23%)
Query: 164 RERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTV 223
++ ++ E +
Sbjct: 272 KKSKKTDEEASGASA-------------------------------------------NL 288
Query: 224 FAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA--- 280
F + E + + F G++ VR++ DR+S RS+G GY+E+ A
Sbjct: 289 FVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEYVSAADAAKAYNAKK 348
Query: 281 --------LSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFN 332
++ G+P + ++ Q+ G P L+VGN+ F+
Sbjct: 349 DTEIDGRKINLDYATGRPANNNNNNNNQDRAQARARNFGDQASPE---SDTLFVGNIPFS 405
Query: 333 MTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGR 392
E + +LF G + ++LP D E+G+ KGFG+VQF+ ++ A+ A + LNG E+ GR
Sbjct: 406 ANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSVDEARQAFNDLNG-AELNGR 464
Query: 393 TLKV 396
+++
Sbjct: 465 PVRL 468
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 41/65 (63%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V L++ TE+++++ FE +GP++ V+L D ET + +G+ F+++ KAA
Sbjct: 138 KTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDMKAAYK 197
Query: 382 ALNGK 386
+G+
Sbjct: 198 QADGR 202
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+YVG + F M E + + +G +E + + ETG+ +GF F+++ A L
Sbjct: 35 VYVGGMPFEMNEGDIIAVMSQYGEIEDCNMVRNKETGKSQGFCFIKYEDQRSTNLAVDNL 94
Query: 384 NGKLEIVGRTLKVSSVTDH 402
G I+GR L+V V D+
Sbjct: 95 TG-YNIMGRLLRVDHVKDY 112
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 51/250 (20%)
Query: 187 ELRE----------------------------------RERDLEMRESRRY-KEKKEVVE 211
EL+ E+ LE+ S+ E K
Sbjct: 308 ELKTAITDFFAKKDLTVVDVRIGATRKFGYVEFESAEDMEKALELSGSKVLGSEMKLEKA 367
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
E +RD RT+F +P K T+ ++ E F A ++RL+ ++ KG+ Y+EF
Sbjct: 368 KENKKDRDARTLFVKNLPYKVTQEELKEVFEDA---IEIRLVCTKDG-TPKGIAYVEFKT 423
Query: 272 VMSVPMAI-ALSGQLLLGQPVMV----KPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYV 326
V A+ G + G+ +++ + S+ ++N N S G + P + + L +
Sbjct: 424 EADVDKALEEKQGTEIDGRALILDYTGEKSQGQENSRGKNNSWSGNNSKP--SDSKTLVL 481
Query: 327 GNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
NL ++ TE L+++FE + L Q G+ KG+ F++FA +E AK A ++ N
Sbjct: 482 NNLAYSATEESLQEVFEKATSISLPQ----NNQGRPKGYAFIEFASVEDAKEALNSCN-N 536
Query: 387 LEIVGRTLKV 396
+EI GR +++
Sbjct: 537 IEIEGRAIRL 546
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 19/153 (12%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
D +T+ + ATE + E F KA + + N R KG +IEF V A
Sbjct: 475 DSKTLVLNNLAYSATEESLQEVFEKATSIS----LPQNNQGRPKGYAFIEFASVEDAKEA 530
Query: 279 IALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATG-PYGAIDRKLYVGNLHFNMTETQ 337
+ + E E ++ TA P ++ L+V L + TE
Sbjct: 531 LNSCNNI-----------EIEGRAIRLELKGQKTANAAPRNQSNKTLFVKGLSEDTTEET 579
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF 370
L+ F G V ++ D ETG KGFGFV F
Sbjct: 580 LKDSFH--GSVG-ARIATDRETGSSKGFGFVDF 609
>gi|159461692|gb|ABW96885.1| Elipsa [Danio rerio]
Length = 629
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 10/67 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ G R+R +DRDRDK++ RDR++D+ RE+ERE E+DR R EKERER + R
Sbjct: 201 DKGRERERTKDRDRDKDKS---RDREKDKTREKEREREKDRNR-------EKERERDKDR 250
Query: 129 DREKERE 135
D++KERE
Sbjct: 251 DKKKERE 257
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 8/81 (9%)
Query: 68 EENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRERERETERDRERSRER-REKEKE 121
E +GSR +D D+ +D+E R D+DR R D+GRERER +RDR++ + R REK+K
Sbjct: 168 ESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKT 227
Query: 122 RERRERRDREKERERERDGER 142
RE+ R+REK+R RE++ ER
Sbjct: 228 REKE--REREKDRNREKERER 246
>gi|336272730|ref|XP_003351121.1| hypothetical protein SMAC_06000 [Sordaria macrospora k-hell]
gi|380093684|emb|CCC08648.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 439
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+Y G L ++++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 VYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 384 NGKLEIVGRTLKV 396
G EI GR ++V
Sbjct: 95 GG-AEIGGRLIRV 106
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 210 VEPEADPERDQR-TVFAY--QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY 266
+ PEA D R T F Y +P +E DV FS+ G+ ++L+ D+ + +SKG G+
Sbjct: 19 IPPEASWHVDYRDTAFVYFGGLPYDLSEGDVITIFSQFGEPVFLKLVRDKETGKSKGFGW 78
Query: 267 IEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
+++ D S +A+ L G + G+ + V
Sbjct: 79 LKYEDQRSTDLAVDNLGGAEIGGRLIRV 106
>gi|41054766|ref|NP_956894.1| TRAF3-interacting protein 1 [Danio rerio]
gi|82187293|sp|Q6PGZ3.1|MIPT3_DANRE RecName: Full=TRAF3-interacting protein 1
gi|34783761|gb|AAH56776.1| TNF receptor-associated factor 3 interacting protein 1 [Danio
rerio]
Length = 629
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 10/67 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERR 128
+ G R+R +DRDRDK++ RDR++D+ RE+ERE E+DR R EKERER + R
Sbjct: 201 DKGRERERTKDRDRDKDKS---RDREKDKTREKEREREKDRNR-------EKERERDKDR 250
Query: 129 DREKERE 135
D++KERE
Sbjct: 251 DKKKERE 257
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 8/81 (9%)
Query: 68 EENGSRRDRDRDRDRDKERHRRDRDRDR-----DRGRERERETERDRERSRER-REKEKE 121
E +GSR +D D+ +D+E R D+DR R D+GRERER +RDR++ + R REK+K
Sbjct: 168 ESSGSREQKDPDQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKT 227
Query: 122 RERRERRDREKERERERDGER 142
RE+ R+REK+R RE++ ER
Sbjct: 228 REKE--REREKDRNREKERER 246
>gi|328865493|gb|EGG13879.1| RapGAP/RanGAP domain-containing protein [Dictyostelium fasciculatum]
Length = 3032
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 218 RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRL-------IMDRNSRRSKGVGYIEFY 270
+ R ++ +P T+ + +FF+ A ++ L ++ +K ++EF
Sbjct: 2573 KQSRRLYIGNIPPNITDNTLIDFFNTAITAANLHLSSKTGPVVLSCQINSAKNFAFLEFR 2632
Query: 271 DVMSVPMAIALSG------QLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKL 324
A+ L G L + +P +P E ++ + S +T + + K+
Sbjct: 2633 SAEEATNAMGLDGISLFTFSLKIRRPTDYQPPANESSMPSAPVSMSIVSTNVPDS-ENKI 2691
Query: 325 YVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
++G + + E Q++ + FG ++ L D +TG KG+ F ++ + E + LN
Sbjct: 2692 FIGGIPTTLNEEQIKSMLLAFGRLKAFNLVKDPKTGSSKGYAFCEYYETEETNDCINGLN 2751
Query: 385 GKLEIVGRTLKVSSVTDHVGTQDTAAKS 412
G + ++L V + VGT+D + S
Sbjct: 2752 GT-KFGEKSLVVQRSS--VGTKDPSTTS 2776
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+Y G L + ++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 384 NGKLEIVGRTLKVSSV 399
G EI GR ++V
Sbjct: 95 GGA-EIGGRLIRVDHA 109
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 210 VEPEADPERDQR-TVFAY--QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGY 266
V PEA D R T F Y +P + +E D+ FS+ G+ ++L+ D+ + +SKG G+
Sbjct: 19 VPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPVFLKLVRDKETGKSKGFGW 78
Query: 267 IEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
+++ D S +A+ L G + G+ + V
Sbjct: 79 LKYEDQRSTDLAVDNLGGAEIGGRLIRV 106
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V L + TE+++++ FE +GP++ V+L D + + +G+ F+++ KAA
Sbjct: 141 KTLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYK 200
Query: 382 ALNGKLEIVGRTLKV 396
+G+ +I GR + V
Sbjct: 201 QADGR-KIDGRRVLV 214
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 34/159 (21%)
Query: 231 KATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQ 289
+ T+ RS+G GY++F D AI + G+ + G+
Sbjct: 197 RGTD-------------------------RSRGYGYVDFEDKSYAEKAIKEMQGKEIDGR 231
Query: 290 PVMVKPSEAEKNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFG 346
+ V S + K +N A G + P L++GNL FN + +LF +G
Sbjct: 232 EINVDMSTS-KPAAGNNDRAKKFGDVPSEP----SETLFLGNLSFNADRDAISELFSKYG 286
Query: 347 PVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNG 385
+ V++P ET Q KGFG+VQ+ +E AK A L G
Sbjct: 287 EIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGLQG 325
>gi|302675531|ref|XP_003027449.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
gi|300101136|gb|EFI92546.1| hypothetical protein SCHCODRAFT_86032 [Schizophyllum commune H4-8]
Length = 559
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 23/194 (11%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI-AL 281
V+ + RD+ EF AG+V +++ + SKG G +EF ++ L
Sbjct: 184 VYVGNLSYDVRYRDLMEFMRGAGEVLFAEVLV-TPTGVSKGCGIVEFASPEDAQRSVREL 242
Query: 282 SGQLLLGQPVMVKPSEAEKNLVQSNTSAG---------GTATGP----------YGAIDR 322
S Q LLG+PV ++ ++ + G G GP G
Sbjct: 243 SEQSLLGRPVFIREDRENESRFGATPVPGKMGMAMAGQGMNAGPPPRPPAHNHAAGNPGN 302
Query: 323 KLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSA 382
+LYVGNL + L+ LF G + + + ++ G+ KG G V F + A+ A
Sbjct: 303 QLYVGNLPYQAGWQDLKDLFRTAGSIVRADINIGMD-GRPKGSGTVVFETAKDAQQAIQM 361
Query: 383 LNGKLEIVGRTLKV 396
NG + GR L+V
Sbjct: 362 YNG-FDWYGRVLEV 374
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L V NL + T L+++FE +G V V +P T + +GF FV+F + A +L
Sbjct: 16 LKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDSL 75
Query: 384 NGKLEIVGRTLKV 396
+G + + GR L+V
Sbjct: 76 DGYI-LDGRELRV 87
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V L++ TE+++++ FE +GP++ V+L D + +G+ F+++ KAA
Sbjct: 138 KTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYK 197
Query: 382 ALNGKLEIVGRTLKV 396
+G+ ++ GR + V
Sbjct: 198 QADGR-KLDGRRVLV 211
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 205 EKKEVVEPEADPE---RDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRS 261
E+ + +P +DP +T+F ++ + TE + F G ++ VRLI D+ + +
Sbjct: 119 EELQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKP 178
Query: 262 KGVGYIEFYDVMSVPMAIALS-GQLLLGQPVMV 293
+G +IE+ + A + G+ L G+ V+V
Sbjct: 179 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 211
>gi|156376723|ref|XP_001630508.1| predicted protein [Nematostella vectensis]
gi|156217531|gb|EDO38445.1| predicted protein [Nematostella vectensis]
Length = 607
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 16/185 (8%)
Query: 222 TVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIAL 281
+VF + A E + FF + G R+I RS+G GY +F A+ L
Sbjct: 369 SVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEG--RSRGFGYADFTSKEDYNKALEL 426
Query: 282 SGQLLLG-----QPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRK-----LYVGNLHF 331
+G+ G P KPS N + G G G D+ L V NL +
Sbjct: 427 NGEDCCGREIRINPANSKPSRGGGNTPRGGGRGRGGRGGFSGGRDQNPPNSSLIVRNLSY 486
Query: 332 NMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVG 391
+ T L FE +++ D E+G+ +GFGFV + +E AK S + G E+ G
Sbjct: 487 DTTTDSLGAAFEGCSNAKVI---FDRESGESRGFGFVDYDDVETAKKVLSEMAG-AEVDG 542
Query: 392 RTLKV 396
R +++
Sbjct: 543 RQVRL 547
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 61/160 (38%), Gaps = 63/160 (39%)
Query: 242 SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKN 301
+KA K + D +P+ + + G L
Sbjct: 231 AKASKHHPI--------------------DPNDIPLKLYIGGLL---------------- 254
Query: 302 LVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQ 361
GP N+TE +L++LF PFG + V++ D TG+
Sbjct: 255 -------------GPLS-------------NITEQELKQLFNPFGDILEVEIHRDPYTGK 288
Query: 362 CKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKVSSVTD 401
KGFGF+QF + A A + +NG +E+ GR +KVS D
Sbjct: 289 SKGFGFIQFHKASEAIEAMTVMNG-MEVAGREIKVSYAQD 327
>gi|340975515|gb|EGS22630.1| hypothetical protein CTHT_0011020 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 367
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+Y G L + ++E + +F FG ++L D ETG+ KGFG++++ A L
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRSTDLAVDNL 94
Query: 384 NGKLEIVGRTLKV 396
+G EI GR ++V
Sbjct: 95 SGA-EIGGRLIRV 106
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 204 KEKKEVVEPEADPERDQR-TVFAY--QMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 260
+E ++ + PEA D R T F Y +P + +E D+ FS+ G+ ++L D+ + +
Sbjct: 13 REIEQGIPPEASWHADYRDTAFIYFGGLPYELSEGDIITIFSQFGEPVFLKLARDKETGK 72
Query: 261 SKGVGYIEFYDVMSVPMAI-ALSGQLLLGQPVMV 293
SKG G++++ D S +A+ LSG + G+ + V
Sbjct: 73 SKGFGWLKYEDQRSTDLAVDNLSGAEIGGRLIRV 106
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 33 REEKSERSYRKREDSEEEEEEEKSRSGKRS---RRDEDEENGSRRDRDRDRDRDKERHRR 89
R E+ E S +++ E E + ++R G+ RRD D RDR R+ RD+ER
Sbjct: 2157 RRERFEGSTKEKSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRER--- 2213
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERE 137
D DR+RD R RE+++ RD +K KER +DRE ER +E
Sbjct: 2214 DWDRNRDWERHREKDSNRD-------WDKNKERNPNRDKDRESERNKE 2254
>gi|195499487|ref|XP_002096969.1| GE25964 [Drosophila yakuba]
gi|194183070|gb|EDW96681.1| GE25964 [Drosophila yakuba]
Length = 908
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 57/81 (70%), Gaps = 13/81 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDR-- 130
+DRDRDRD+ KE +DRDRD+ + ++R++ E+DR+R E+ +EK+++R+R + +D+
Sbjct: 182 KDRDRDRDKSKE---KDRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDRDRAKSKDKFT 238
Query: 131 ------EKERERERDGERRSS 145
EKE+E+ +G +RS+
Sbjct: 239 AAQAPFEKEKEKS-EGRKRSA 258
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 14/117 (11%)
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERER 138
R +DKE+ DRDRDRD+ +E+ +RDR++S+E+ R+K KE++R ++ KE++R+R
Sbjct: 176 RVKDKEK---DRDRDRDKSKEK----DRDRDKSKEKDRDKSKEKDRDRVTEKSKEKDRDR 228
Query: 139 DGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDL 195
D R+ S+ + +++Q+ + + E + S E E+ RER R+++RD
Sbjct: 229 D---RAKSKDKFTAAQAPFEKEKEKSEGRKRSAVEPASHPEK---RERHERDKQRDW 279
>gi|126314555|ref|XP_001362188.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Monodelphis
domestica]
Length = 715
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 18/170 (10%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE--DEENGSRRDRDRDRDRDKERHRR--- 89
E+ R+++ +ED E +++S S +R ++E DEEN + RD+D+ER +
Sbjct: 156 EEDSRTHKDKEDRRISEIKDRSTSRERKIKEESKDEEN-------KPRDKDREREKSKDG 208
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERER---RERRDREKERERER--DGERRS 144
DR+R +D R++ ++ ERDR ++R ++E+E+E+ R R +DRE ER++ER +G +
Sbjct: 209 DRERHKDPDRDKGKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKERKIEGGKEK 268
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE-LRERER 193
R + R ++++RE ++R + E RE E++ ++E+ER
Sbjct: 269 ERLKERDRERERERERERAKDKDREKRKDRTKDGEHSREHEKDKIKEQER 318
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 25/142 (17%)
Query: 21 QDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRD 79
+D +S ++K K E K E + + +D E EKS+ G R R +D D + G +RDR+
Sbjct: 174 KDRSTSRERKIKEESKDEENKPRDKD----REREKSKDGDRERHKDPDRDKGKDVERDRN 229
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKE------------------K 120
++R K+ R++ RD+DRG ++RE ERD+ER E +EKE K
Sbjct: 230 KNRVKQEREREKSRDKDRGN-KDRELERDKERKIEGGKEKERLKERDRERERERERERAK 288
Query: 121 ERERRERRDREKERERERDGER 142
+++R +R+DR K+ E R+ E+
Sbjct: 289 DKDREKRKDRTKDGEHSREHEK 310
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQF-----AQLEHA 376
+ L+VG ++F+ +E +LR+ FE +GPV+ + + D ++G+ +G+ FV++ +
Sbjct: 102 KTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDPKSGKPRGYAFVEYENERDMHSAYK 161
Query: 377 KAAQSALNGKLEIV----GRTLK 395
A ++GK +V GRT+K
Sbjct: 162 YADGKKIDGKRVVVDVERGRTVK 184
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V L + TE+++++ FE +G ++ V+L D E+ + +G+ F+++ KAA
Sbjct: 139 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAFIEYLHTRDMKAAYK 198
Query: 382 ALNGKLEIVGRTLKV 396
+G+ +I GR + V
Sbjct: 199 QADGR-KIEGRRVLV 212
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+VGNL F++ + + K F+ G V V+ D E G+ KGFG V+FA E AAQS
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSD-EEGRFKGFGHVEFASAE---AAQS 439
Query: 382 AL--NGKLEIVGRTLKV 396
AL NG+ E++ R +++
Sbjct: 440 ALEMNGQ-ELLQRAVRL 455
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 66/256 (25%)
Query: 152 SSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRYKEKKEVVE 211
+S + + K K E
Sbjct: 270 TSATPK----------------------------------------------KSKTEDPA 283
Query: 212 PEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYD 271
P A +F + E + F G++ VR++ +R++ RS+G GY+E+ +
Sbjct: 284 PGA-----SANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRGFGYVEYTN 338
Query: 272 VMSVPMAI------ALSGQLL-----LGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAI 320
+ A + G+++ G+P K+ + + G P
Sbjct: 339 AVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQQGGFKDRANARARSFGDQASPE--- 395
Query: 321 DRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQ 380
L+VGNL F+ E + +LF G + ++LP D ++G+ KGFG+VQ++ ++ A+AA
Sbjct: 396 SDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGRPKGFGYVQYSSVDEARAAF 455
Query: 381 SALNGKLEIVGRTLKV 396
+ L G +++GR +++
Sbjct: 456 NELQG-ADLLGRPVRL 470
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V L + TE+++++ FE +G ++ V+L D E+ + +G+ F+++ KAA
Sbjct: 135 KTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAFIEYLHTRDMKAAYK 194
Query: 382 ALNGKLEIVGRTLKV 396
+G+ +I GR + V
Sbjct: 195 QADGR-KIEGRRVLV 208
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 14/79 (17%)
Query: 63 RRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKER 122
RRD D RDR R+ RD+ER D DR+RD R RE+++ RD ++++ER
Sbjct: 2189 RRDRDHGKPWERDRGRNWSRDRER---DWDRNRDWERHREKDSNRDWDKNKERNP----- 2240
Query: 123 ERRERRDREKERERERDGE 141
+R+KERE ER+ E
Sbjct: 2241 ------NRDKERESERNKE 2253
>gi|218440494|ref|YP_002378823.1| hypothetical protein PCC7424_3565 [Cyanothece sp. PCC 7424]
gi|218173222|gb|ACK71955.1| protein of unknown function DUF323 [Cyanothece sp. PCC 7424]
Length = 925
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 100/183 (54%), Gaps = 24/183 (13%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDE 68
LEK +E+ QKQ + +AKR+ K ER R EEE ++ R RR+E+
Sbjct: 384 LEKQHQEEEIQKQ-----RQAEAKRQAKLERQRR-------EEEAQRQAELDRQRREEE- 430
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDR-----GRERERETERDRERSRERREKEKERE 123
++R + DR R +E +R + DR R ++R+ E +R + R+RRE+E +R+
Sbjct: 431 ---AQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQ 487
Query: 124 R---RERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELER 180
R+RR+ E +R+ E D +RR ++ ++++R + R+ RE E++R+ EL+ +R
Sbjct: 488 AELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR 547
Query: 181 ERE 183
E
Sbjct: 548 REE 550
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 26/192 (13%)
Query: 45 EDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERERE 104
E+ +++ + E R K R+ +EE ++R + DR R +E +R + DR R RE E
Sbjct: 391 EEIQKQRQAEAKRQAKLERQRREEE--AQRQAELDRQRREEEAQRQAELDRQR---REEE 445
Query: 105 TERDRERSRERREKEKERER-----------RERRDREKERERERDGERRSSSRSRRSSS 153
+R E R+RRE+E +++R R+RR+ E +R+ E D +RR R++
Sbjct: 446 AQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQA-- 503
Query: 154 QSRRSSSRSRRE----RERESERERELELERERERERELRERERDLEMRESRRYKEKKEV 209
R RRE ++R++E +R+ +LER+R E R+ E D + RE K+++
Sbjct: 504 ----ELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEIQKQRQAE 559
Query: 210 VEPEADPERDQR 221
+ +A ER +R
Sbjct: 560 AKRQAKLERQRR 571
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 27/194 (13%)
Query: 5 EYEYLEKTVEEQRQ-----------QKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEE 53
E ++ E+ +++QRQ Q++++++ + + R+ + E + R+ E + EE
Sbjct: 385 EKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREE 444
Query: 54 EKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDR----DRGRERERETERDR 109
E R + R+ +EE +R + R ER RR+ + R DR R RE E +R
Sbjct: 445 EAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR-REEEAQRQA 503
Query: 110 ERSRERREKEKERER-----------RERRDREKERERERDGERRSSSRSRRSSSQSRRS 158
E R+RRE+E +++R R+RR+ E +R+ E D +RR ++ ++++R
Sbjct: 504 ELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQ 563
Query: 159 SSRSRRERERESER 172
+ R+ RE E+++
Sbjct: 564 AKLERQRREEEAQK 577
>gi|126314557|ref|XP_001362270.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Monodelphis
domestica]
Length = 648
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 99/170 (58%), Gaps = 18/170 (10%)
Query: 35 EKSERSYRKREDSEEEEEEEKSRSGKRSRRDE--DEENGSRRDRDRDRDRDKERHRR--- 89
E+ R+++ +ED E +++S S +R ++E DEEN + RD+D+ER +
Sbjct: 156 EEDSRTHKDKEDRRISEIKDRSTSRERKIKEESKDEEN-------KPRDKDREREKSKDG 208
Query: 90 DRDRDRDRGRERERETERDRERSRERREKEKERER---RERRDREKERERER--DGERRS 144
DR+R +D R++ ++ ERDR ++R ++E+E+E+ R R +DRE ER++ER +G +
Sbjct: 209 DRERHKDPDRDKGKDVERDRNKNRVKQEREREKSRDKDRGNKDRELERDKERKIEGGKEK 268
Query: 145 SSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE-LRERER 193
R + R ++++RE ++R + E RE E++ ++E+ER
Sbjct: 269 ERLKERDRERERERERERAKDKDREKRKDRTKDGEHSREHEKDKIKEQER 318
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 25/142 (17%)
Query: 21 QDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR-RDEDEENGSRRDRDRD 79
+D +S ++K K E K E + + +D E E KS+ G R R +D D + G +RDR+
Sbjct: 174 KDRSTSRERKIKEESKDEENKPRDKDRERE----KSKDGDRERHKDPDRDKGKDVERDRN 229
Query: 80 RDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKE------------------K 120
++R K+ R++ RD+DRG ++RE ERD+ER E +EKE K
Sbjct: 230 KNRVKQEREREKSRDKDRGN-KDRELERDKERKIEGGKEKERLKERDRERERERERERAK 288
Query: 121 ERERRERRDREKERERERDGER 142
+++R +R+DR K+ E R+ E+
Sbjct: 289 DKDREKRKDRTKDGEHSREHEK 310
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 78 RDRDRDKERHRR---DRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKE 133
RDR+R+ ER R +RDR+R+ R+R RETERDR R ER R +E ER+R +R++
Sbjct: 693 RDRNRETERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRN 752
Query: 134 RERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERE----REREL- 188
RE ERD R + R + + R R RE E +R RE+E +R RE R RE
Sbjct: 753 REVERDRNRETGRDRNRETGRDRNREVERDRNREMEKDRNREVEKDRNRETGRDRNRETG 812
Query: 189 RERERDLE 196
R+R R+++
Sbjct: 813 RDRNREID 820
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 14/118 (11%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
RDR+R+ +RD+ R +RDR+R+ R+R RE ERDR R ER R +E ER+R +R++
Sbjct: 685 RDRNREVERDRNRET-ERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDR 743
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERERERE 185
RE ERD R+R R + R R R+R RE ER+R E+E++R RE
Sbjct: 744 NREVERD-------RNREVERDRNRETGRDRNRETGRDRNREVERDRNREMEKDRNRE 794
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 23/141 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER---REKEKERER---RER 127
RDR+R+ +RD+ R +RDR+R+ R+R RETERDR R ER RE E++R R R+R
Sbjct: 709 RDRNREVERDRNRET-ERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETGRDR 767
Query: 128 -------RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERE 175
R+RE ER+R R+ E+ R+R R + R R R+R RE +R+R
Sbjct: 768 NRETGRDRNREVERDRNREMEK---DRNREVEKDRNRETGRDRNRETGRDRNREIDRDRN 824
Query: 176 LELERERERERELRERERDLE 196
E++R+R RE + R+R R++E
Sbjct: 825 REIDRDRNREID-RDRNREME 844
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 10/120 (8%)
Query: 74 RDRDRDRDRDKERH-RRDRDRD--RDRGRE----RERETERDRERSRER-REKEKERERR 125
RDR+R+ +RD+ R RDR+R+ +DR RE R RE ERDR R ER R +E ER+R
Sbjct: 645 RDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNREVERDRNRETERDRN 704
Query: 126 ERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERE 185
+R++ RE ERD R + R + R + + R+R RE ER+R E+ER+R RE
Sbjct: 705 REVERDRNREVERDRNRETERDRNREVERDR--NRETERDRNREVERDRNREVERDRNRE 762
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 72 SRRDRDRDRDRDKERHRR---DRDRDRDRGRERERETERDRERSRER-REKEKERERRER 127
S R++ R R+R+ ER R +RDR+R+ R+R RE E+DR R E+ R +E ER+R
Sbjct: 631 SERNKKRPRNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNRE 690
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE 187
+R++ RE ERD R+ R + R+R RE+ER+R E+ER+R RE E
Sbjct: 691 VERDRNRETERD----------RNREVERDRNREVERDRNRETERDRNREVERDRNRETE 740
Query: 188 LRERERDLE 196
R+R R++E
Sbjct: 741 -RDRNREVE 748
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 74 RDRDRDRDRDKER-HRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
R+RD R + KER HRR + ++RD R + +E R +SRER K R RDRE
Sbjct: 121 RERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERDHK-----RSRSRDREN 175
Query: 133 ERERERDGERR---SSSRSRRSSSQSRRSSSRSRRERERESERERELE 177
+R R ERR S S+ RR S RS SR RR+ + R +E E
Sbjct: 176 KRSETRPQERRRSRSKSKERRKS----RSKSRERRQDRKSPSRIKERE 219
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Query: 73 RRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRE---RREKEKERE--RRER 127
RR + R+RD HRR + ++RD R + +E + R +S+E RR K +ER+ R
Sbjct: 116 RRSKSRERD-----HRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERDHKRSRS 170
Query: 128 RDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERE 167
RDRE +R R ERR RSR S + R+S S+SR R+
Sbjct: 171 RDRENKRSETRPQERR---RSRSKSKERRKSRSKSRERRQ 207
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 87 HRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSS 145
HRR + R+RD R + +E + R +S+ER + K +E RR + +ER+ +RS
Sbjct: 115 HRRSKSRERDHRRSKSKERDHRRSKSKERDHRRSKSKEHVHRRSKSRERD-----HKRSR 169
Query: 146 SRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE----LRERE 192
SR R + R R RR R + ER + RER ++R+ ++ERE
Sbjct: 170 SRDRENKRSETRPQER-RRSRSKSKERRKSRSKSRERRQDRKSPSRIKERE 219
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++ V+L D
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTD 173
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
ET + +G+ F+++ K A +G+
Sbjct: 174 KETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLD 356
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++ V+L D
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTD 173
Query: 357 IETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
ET + +G+ F+++ K A +G+
Sbjct: 174 KETNKPRGYAFIEYMHTRDMKNAYKQADGR 203
>gi|332028066|gb|EGI68117.1| Protein split ends [Acromyrmex echinatior]
Length = 4415
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 380
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 464 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 519
Query: 381 SALNG 385
+++G
Sbjct: 520 RSMDG 524
>gi|322791721|gb|EFZ15997.1| hypothetical protein SINV_11524 [Solenopsis invicta]
Length = 4232
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 380
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 363 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 418
Query: 381 SALNG 385
+++G
Sbjct: 419 RSMDG 423
>gi|307200599|gb|EFN80740.1| Protein split ends [Harpegnathos saltator]
Length = 4415
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 380
R L++GNL ++T ++LRK FEPFG E+++ +DI + G + F Q++ + A
Sbjct: 382 RTLFIGNLEKDVTASELRKHFEPFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 437
Query: 381 SALNG 385
+++G
Sbjct: 438 RSMDG 442
>gi|170056240|ref|XP_001863941.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876010|gb|EDS39393.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 643
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 90/140 (64%), Gaps = 13/140 (9%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
R +DR +R K+R + +R +DR+ R+++R+TER ++R ER ++++ ER++ E R ++
Sbjct: 476 RQKDRKTERQKDR-KTERQKDRETERQKDRKTERQKDRKTERQKDRKTERQKTEDRRQKT 534
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR--- 189
E R++ +RR + RR ++ RR + RR++ +ER+++ E ER+++R+ ++
Sbjct: 535 EDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQK---TERQKDTETERQKDRKTGIQKDR 591
Query: 190 --ERERDLEMRESRRYKEKK 207
ER++D R++ R K++K
Sbjct: 592 KTERQKD---RKTERQKDRK 608
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 118/198 (59%), Gaps = 10/198 (5%)
Query: 13 VEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGS 72
E Q+ +K + K + +++ K+ER ++ + +++ + E+ + +++ R +D +
Sbjct: 426 TERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKDRKTERQK-DRKTERQKDRKTER 484
Query: 73 RRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
++DR +R +D+E R+ +DR R+++R+TER ++R ER++ E R++ E R ++
Sbjct: 485 QKDRKTERQKDRETERQ---KDRKTERQKDRKTERQKDRKTERQKTEDRRQKTEDRRQKT 541
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERE---LR 189
E R++ +RR + RR ++ RR + +++ E E +++R+ ++++R+ ER+
Sbjct: 542 EDRRQKTEDRRQKTEDRRQKTEDRRQKTERQKDTETERQKDRKTGIQKDRKTERQKDRKT 601
Query: 190 ERERDLEMRESRRYKEKK 207
ER++D R++ R K++K
Sbjct: 602 ERQKD---RKTERQKDRK 616
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 116/199 (58%), Gaps = 14/199 (7%)
Query: 27 SKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEEN-GSRRDRDRDRDRDKE 85
S K K E + +R +++D + E ++++ ++ R+ E +++ + R +DR +R K+
Sbjct: 404 SPKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKD 463
Query: 86 RHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSS 145
R + +R +DR R+++R+TER ++R ER +K+RE ++DR+ ER+++R ER+
Sbjct: 464 R-KTERQKDRKTERQKDRKTERQKDRKTER---QKDRETERQKDRKTERQKDRKTERQKD 519
Query: 146 SRSRRSSSQSRRSSSRSRRE-----RERESERERELELERER-ERERELRERERDLEMRE 199
++ R ++ RR + RR+ R++ +R ++ E R++ E R+ ER++D E
Sbjct: 520 RKTERQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTEDRRQKTERQKDT---E 576
Query: 200 SRRYKEKKEVVEPEADPER 218
+ R K++K ++ + ER
Sbjct: 577 TERQKDRKTGIQKDRKTER 595
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Query: 64 RDEDEENGSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKER 122
RD D+E R +DR+R+RDKER+R +D++RD++R ++RER ++DR++ ++R +++++
Sbjct: 396 RDRDKEKDRDRGKDRERERDKERNREKDKERDKERSKDRERARDKDRDKDKDREKEKEKD 455
Query: 123 ERRERR-------DREKERERERDGERRSSSRSR 149
+ +E+ DREKERE+ERD +R+ RSR
Sbjct: 456 KDKEKDKEEEKDGDREKEREKERDDKRKKIXRSR 489
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|390345979|ref|XP_789163.3| PREDICTED: uncharacterized protein LOC584197 [Strongylocentrotus
purpuratus]
Length = 1759
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 27/204 (13%)
Query: 12 TVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENG 71
T +E+ QK + + RE K E+ ++ D +++ + E+ R GK S ED E G
Sbjct: 1312 TPKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDR-GKDST--EDGEQG 1368
Query: 72 SRRDRDRDRDRDKER-----------------HRRDRDRDRDRGRERERETERDRERSRE 114
R+RDRD+++DK + H +DR R+RD GR+RER+ R R+ R
Sbjct: 1369 RERERDRDQEKDKGKDATVDGEQDRERERDREHEKDRGRERDHGRDRERDLRRVRDDERH 1428
Query: 115 RREKEKERERRERRDREKERERER-DGERRSSSRSRR--SSSQSRRSSSRSRRERERESE 171
R +++RE R +D E ++ER D E+ RR S + R R+R E +R +
Sbjct: 1429 R---DQDRENRHEKDGLPEVDQERYDSEKARYENERRYYESQRYERERERARHEADRGYD 1485
Query: 172 RERELELERERERERELRERERDL 195
RER+ +R+ RER +R RERD+
Sbjct: 1486 RERQRHPDRDILRER-VRYRERDV 1508
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 25/204 (12%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDK 84
S KK +EE ++ ++ S ++ E K K + D D++ + +DR +D D
Sbjct: 1306 SGDKKGTPKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDRGKDSTEDG 1365
Query: 85 ERHR---RDRDRDRDRGRE----------RERETERDRERSRERREKEKERERRERRDRE 131
E+ R RDRD+++D+G++ RER+ E +++R RE R+ ++RER RR R+
Sbjct: 1366 EQGRERERDRDQEKDKGKDATVDGEQDRERERDREHEKDRGRE-RDHGRDRERDLRRVRD 1424
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERER---------ESERERELELERER 182
ER R++D E R Q R S ++R E ER E +R
Sbjct: 1425 DERHRDQDRENRHEKDGLPEVDQERYDSEKARYENERRYYESQRYERERERARHEADRGY 1484
Query: 183 ERERELRERERDLEMRESRRYKEK 206
+RER+ R +RD+ +RE RY+E+
Sbjct: 1485 DRERQ-RHPDRDI-LRERVRYRER 1506
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 304 QSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCK 363
++T+A G A + L+V ++++ TE++LR+ FE +GP++ + + + +G+ +
Sbjct: 92 HNDTNAQGDAF-------KTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKPR 144
Query: 364 GFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G+ F+++ +A +GK +I GR + V
Sbjct: 145 GYAFIEYEHERDMHSAYKHADGK-KIDGRRVLV 176
>gi|395851493|ref|XP_003798288.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Otolemur
garnettii]
Length = 695
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 74/112 (66%), Gaps = 5/112 (4%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K AK EE R ++ +ED + E +E+S S +R +++E +E R++++D+ ++
Sbjct: 152 KNAKEEES--RIHKDKEDRKNSEIKERSTSRERKQKEELKEESKPREKEKDK---EKAKE 206
Query: 89 RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDG 140
DRDR +D R+R RE ER++ + R ++E+E++R+R + DREKERE++ +G
Sbjct: 207 NDRDRHKDAERDRHREGEREKSKGRAKQERERDRDRGKELDREKEREKKSEG 258
>gi|225438475|ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
Length = 542
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 11/73 (15%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRK--REDSEEEEEEEKSRS 58
M+FDEYEYLEK VEE +K+ D EKSERSYRK + ++++E + R
Sbjct: 1 MDFDEYEYLEKAVEEPENRKKKDGG---------EKSERSYRKREGGEEDDDDERGEGRR 51
Query: 59 GKRSRRDEDEENG 71
KRSR +E++E G
Sbjct: 52 SKRSRGEEEKERG 64
>gi|195012259|ref|XP_001983554.1| GH15516 [Drosophila grimshawi]
gi|193897036|gb|EDV95902.1| GH15516 [Drosophila grimshawi]
Length = 1158
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 111/189 (58%), Gaps = 7/189 (3%)
Query: 27 SKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKER 86
SK+K +R ++ +RS ++ E + +E+ RS R+ E +++ R+ R ++R R KER
Sbjct: 419 SKEKRQRSKEKQRSKERQRSKERQRSKERHRSKDRATSKERQQSKERQQRQKERKRSKER 478
Query: 87 HR-RDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDREKERERERDGER 142
+ ++R R ++R R +ER ++R RS++R +EK + +ER + ++R + +ER + ER
Sbjct: 479 QKSKERLRSKERQRSKERLRSKERLRSKDRPKSKEKLRSKERLKSKERVRSKERFKSKER 538
Query: 143 RSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRR 202
S RS + R S +ER+R +R+R L ER R +ER LR +ER L +E R
Sbjct: 539 VKSKEVLRSKERQRSKERLSSKERQRSKDRQR-LSKERLRSKER-LRSKER-LRSKERLR 595
Query: 203 YKEKKEVVE 211
KE+++ E
Sbjct: 596 SKERQKSKE 604
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 497 PSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHIYVDKR-------SAGFVY 549
P+ + L NM + D EI+GDV EEC +YG+VK V + G ++
Sbjct: 950 PTCVVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSAEVPRPEDGKEVLGLGEIF 1009
Query: 550 LRFESTEAAASAQRAMHMRWFARRLISAIF 579
+ FE A + A+ R F + + A +
Sbjct: 1010 VEFEDVAGATKGRNALAGRKFGGKAVKATY 1039
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
L V NL ++T+ +R+L PFG ++ L L +G+ KG ++ +E+ + A S L
Sbjct: 851 LMVMNLPDSLTDDHVRELLSPFGELKKFNL-LKDSSGKSKGTAVFEYTDMENGQLALSGL 909
Query: 384 NG 385
+G
Sbjct: 910 SG 911
>gi|326670258|ref|XP_003199176.1| PREDICTED: hypothetical protein LOC100536078 [Danio rerio]
Length = 1422
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 104/180 (57%), Gaps = 24/180 (13%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K A+RE + +R + ++ E E E+E+ +R R R+ ++ ++ +KER R
Sbjct: 644 KAAERELEQQREFERQRQKEFEREKERMLEQERLRL---------REFEKQKEIEKERER 694
Query: 89 R-DRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSR 147
+ + +R R+ R+++RE E+ RE R+ +E E++RE + +R+ EK++E+ER+ +R
Sbjct: 695 QLELERQREIERQKQRELEKQREIERQ-KEIERQRELQRQRELEKQKEQEREKQRHL--- 750
Query: 148 SRRSSSQSRRSSSRSRRERERESERERELELEREREREREL---RERERDLEMRESRRYK 204
R+ +RE ER+ E ER+LE+ER++E E++ R+++ DL++ R K
Sbjct: 751 -------ERQKELDRQRELERQRELERQLEIERQKEIEKQKEFERQKQMDLDIERWTRQK 803
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 78/126 (61%), Gaps = 10/126 (7%)
Query: 89 RDRDRDRDRGRERERETERDRERSRER-----REKEKERERRERRDREKERERERDGERR 143
R+ ++ R+ R+R++E ER++ER E+ RE EK++E + R+R+ E ER+R+ ER
Sbjct: 648 RELEQQREFERQRQKEFEREKERMLEQERLRLREFEKQKEIEKERERQLELERQREIER- 706
Query: 144 SSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERERDLEMRESRRY 203
+ +R + R + ER+RE +R+RELE ++E+ERE++ R ER E+ R
Sbjct: 707 ---QKQRELEKQREIERQKEIERQRELQRQRELEKQKEQEREKQ-RHLERQKELDRQREL 762
Query: 204 KEKKEV 209
+ ++E+
Sbjct: 763 ERQREL 768
>gi|301605148|ref|XP_002932194.1| PREDICTED: hypothetical protein LOC100170167 [Xenopus (Silurana)
tropicalis]
Length = 502
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 23/166 (13%)
Query: 9 LEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRS----GKRSRR 64
LE+ E QR +++ K+ KR +ER ++ E +SRS R R
Sbjct: 283 LEREKERQRLERES------KEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRER 336
Query: 65 DEDEENGSRRDRDRDRDRDKERHRRDR--DRDRDRGRERERETE-RDRERSRERREKEKE 121
D+++EN +R R RD DK+ + RD+ DR RDR +ER R E +DRE R R +++
Sbjct: 337 DKEKEN----ERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSR 392
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSR-RSSSRSRRER 166
+ERR R R K+R+ +R+S S S+ +SS++R RS RS R +
Sbjct: 393 KERRHSRSRSKDRK-----QRKSKSPSKNASSRARSRSKERSNRHK 433
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 49 EEEEEEKSRSGKRS---RRDEDEENGSRRDRDRDR-----DRDKER-HRRDRDRDRDR-G 98
E +E+++SRS +R +R + E R R RDR +RDKE+ + R R RD D+ G
Sbjct: 295 ESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRERDKEKENERSRKRDYDKKG 354
Query: 99 RERERETERDRERSRERR---EKEKERERRERRDREKERERERDGERRSSSRSRRSSSQS 155
R++E +R R+RS+ERR EK+ ++R R DR+ +ER R + R+S S S
Sbjct: 355 NGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSRSRSKDRKQRKSKSPS 414
Query: 156 RRSSSRSR-RERER 168
+ +SSR+R R +ER
Sbjct: 415 KNASSRARSRSKER 428
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 77 DRDRDRDKERHRRDRD-RDRDRGRERERETERDRERSRER-----REKEKERERRER-RD 129
DR+ +R+KER R +R+ +++ R R ER ER R +SRER R ++++ +RRER ++
Sbjct: 280 DRELEREKERQRLERESKEKKRSRSNERGLERKRSKSRERHRTRSRSRDRKADRRERDKE 339
Query: 130 REKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR 189
+E ER R+RD +++ + R + + RS R R + +++ E +R + R+ R R
Sbjct: 340 KENERSRKRDYDKKGNGRDKEADRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSR 399
Query: 190 ERERDLEMRESR 201
R +D + R+S+
Sbjct: 400 SRSKDRKQRKSK 411
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 23/125 (18%)
Query: 75 DRDRDRDRDKERHRR-DRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREK 132
DRDR+R+ D++R+R DRDR+R+ R+R RE +RDR R +R R +E +R+R DR++
Sbjct: 517 DRDRNREFDRDRNREFDRDRNREFDRDRNREMDRDRNREMDRDRNREMDRDRNREMDRDR 576
Query: 133 ERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRERE 192
RE +RD R R+R RE +R+R E +R+R RE +R+
Sbjct: 577 NREMDRDRNREVD------------------RDRNREFDRDRNREFDRDRNRE---FDRD 615
Query: 193 RDLEM 197
R+ EM
Sbjct: 616 RNREM 620
>gi|395851495|ref|XP_003798289.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Otolemur
garnettii]
Length = 629
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 74/112 (66%), Gaps = 5/112 (4%)
Query: 29 KKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDRDRDKERHR 88
K AK EE R ++ +ED + E +E+S S +R +++E +E R++++D+ ++
Sbjct: 152 KNAKEEES--RIHKDKEDRKNSEIKERSTSRERKQKEELKEESKPREKEKDK---EKAKE 206
Query: 89 RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKERERERDG 140
DRDR +D R+R RE ER++ + R ++E+E++R+R + DREKERE++ +G
Sbjct: 207 NDRDRHKDAERDRHREGEREKSKGRAKQERERDRDRGKELDREKEREKKSEG 258
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V ++++ TE++LR+ FE +GP++ + + + +G+ +G+ F+++ +A
Sbjct: 103 KTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYK 162
Query: 382 ALNGKLEIVGRTLKV 396
+GK +I GR + V
Sbjct: 163 HADGK-KIDGRRVLV 176
>gi|348503678|ref|XP_003439391.1| PREDICTED: WD repeat-containing protein 60 [Oreochromis niloticus]
Length = 1083
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 88 RRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSS 146
+ +RDRD++R R++E+E RDR+R RE R K ++ +ER+ E++RE DGERR
Sbjct: 129 KHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKREEQDRELRDDGERRRHK 188
Query: 147 RSRRSSSQSRRSSSRSRRERERESERERELELERERERERELR-ERERDL---EMRESRR 202
SR R ++R RE ER + E E R + ER RD+ E +E R
Sbjct: 189 ESREVRGAQIEQHHREEKDRHRERERH-----QNEYEDTRNAKEERHRDMKHSEQKEDRE 243
Query: 203 Y 203
Y
Sbjct: 244 Y 244
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 20/102 (19%)
Query: 57 RSGKRSRRDEDEENGSRRDRDRDRD------RDKERHR-RDRDRDRDRG-RERERETERD 108
R K RRD +E++ RD++R RD RD++RHR DR + RD G +ER+RE E+D
Sbjct: 117 RENKEKRRDLEEKHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKRE-EQD 175
Query: 109 RE-----------RSRERREKEKERERRERRDREKERERERD 139
RE SRE R + E+ RE +DR +ERER ++
Sbjct: 176 RELRDDGERRRHKESREVRGAQIEQHHREEKDRHRERERHQN 217
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 43/177 (24%)
Query: 241 FSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA-LSGQLLLGQPVMVKPSEAE 299
F G V R+IM+R + +S+G GY++F A+A + G+ + G+P+ + S +
Sbjct: 235 FEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKALAEMQGKEIDGRPINLDMSTGK 294
Query: 300 KNLVQSNTSA---GGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPV-------- 348
+ +SN A G + + P L++GNL FN L F +G V
Sbjct: 295 PHASKSNDRAKQFGDSQSPP----SDTLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTH 350
Query: 349 ---------ELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
VQ + ++ AKAA ALNG+ I GR ++
Sbjct: 351 PDTQQPKGFGYVQF-----------------SSVDEAKAALEALNGQY-IEGRPCRL 389
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 14/137 (10%)
Query: 74 RDRDRDRDRDKERHR---RDRDRDRDRGRERERETER----DRERSRER-REKE----KE 121
R R ++R R KER R + R +DR R +ER+R ER +R+RS+ER R KE KE
Sbjct: 488 RQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKE 547
Query: 122 RERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERE 181
R+R + R R KER++ER ER+ S R S + +RS R +R +ER+ +ER +R+
Sbjct: 548 RQRSKERVRSKERQKERSAERQRSKVKER-SKERQRSKERVQRSKERQRSKERLRSKDRQ 606
Query: 182 REREREL-RERERDLEM 197
R +ER+ +ER R E+
Sbjct: 607 RSKERQKSKERPRQGEV 623
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 110/193 (56%), Gaps = 22/193 (11%)
Query: 23 DDSSSKKK----AKREEKSERSYRK--REDSEEEEEEEKSRSGKRSRRDEDEENGSRRDR 76
+DSS++K+ ++R + ER R R ++E + +E+ RS +R+ E + + RR
Sbjct: 374 NDSSTEKREHSASRRHKSKERPTRTPPRRETERQRSKERQRSKQRAGSKERKRSKERRS- 432
Query: 77 DRDRDRDKERHR---RDRDRDRDRGRERERETERDRERSRER---REKEKERERRERRDR 130
+R R KER R ++R + +DR R +ER+ ++R+RS+ER R++ KER R + R R
Sbjct: 433 --ERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPKERQRSKERPRSKERQR 490
Query: 131 EKERERERD---GERRSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERERERER 186
KER R ++ + + S+ R S + +RS R R +ER+R ER R E R +ER+R
Sbjct: 491 SKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQR 550
Query: 187 E---LRERERDLE 196
+R +ER E
Sbjct: 551 SKERVRSKERQKE 563
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Query: 76 RDRDRDRDKERHR---RDRDRDRDRGRERERETER----DRERSRER-REKEKERERRER 127
R +DR R KER R R R ++R R +ER R ER +R+RS+ER R KE+++ER
Sbjct: 508 RSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQRSKERVRSKERQKERSAE 567
Query: 128 RDR----EKERERERDGERRSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERER 182
R R E+ +ER+R ER S+ R+ S + RS R R +ER++ ER R+ E+ +ER
Sbjct: 568 RQRSKVKERSKERQRSKERVQRSKERQRSKERLRSKDRQRSKERQKSKERPRQGEVAKER 627
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 13/161 (8%)
Query: 38 ERSYRKREDSEEEEEEEKSRS-GKRSRRDEDEENGSRRDRDRDRDRDKERHRRDRDRDRD 96
ER K SE + +E+ RS GK ++ +D R + ++R R KER + +R R ++
Sbjct: 423 ERKRSKERRSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQRSKERPK-ERQRSKE 481
Query: 97 RGRERERETERDRERSRER-REKEKERERRERRDREKER--ERERDGERRSS-----SRS 148
R R +ER+ ++R RS+ER R KEK R + R +E++R ER R ER+ S S+
Sbjct: 482 RPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKE 541
Query: 149 RRSSSQSRRSSSRSR---RERERESERERELELERERERER 186
R S + +RS R R R++ER +ER+R ER +ER+R
Sbjct: 542 RVRSKERQRSKERVRSKERQKERSAERQRSKVKERSKERQR 582
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 71 GSRRDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRER---REKEKERERRE 126
G R + +DR R KER + ++R R ++R +ER+R ER R + R+R R + KER R +
Sbjct: 445 GKERQKSKDRARSKERQKSKERQRSKERPKERQRSKERPRSKERQRSKERLRSKERLRSK 504
Query: 127 RRDREKERERERDGER---RSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERER 182
+ R K+R R ++ +R R S+ R+ S + RS R R +ER+R ER R E ++ER
Sbjct: 505 EKPRSKDRHRSKERQRSVERPRSKERQRSKERLRSKERVRSKERQRSKERVRSKERQKER 564
Query: 183 ERERE 187
ER+
Sbjct: 565 SAERQ 569
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 126
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 127 AFNGVMFGDRPLKINHSNNAIVKPPE 152
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 126
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 127 AFNGVMFGDRPLKINHSNNAIVKPPE 152
>gi|328865125|gb|EGG13511.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 662
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 324 LYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSAL 383
+Y+ +L + TE QL F FG ++ +++ + G+ KG+ FV+ + E A A+ L
Sbjct: 139 VYISSLDWWTTEQQLETFFAEFGKLKTLKIFENELNGKSKGYAFVELSSNEQALQAKEKL 198
Query: 384 NGKLEIVGRTLKVSSVT 400
+ K +I GR + + +V+
Sbjct: 199 SDK-QINGREVTIKAVS 214
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 126
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 127 AFNGVMFGDRPLKINHSNNAIVKPPE 152
>gi|237839061|ref|XP_002368828.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211966492|gb|EEB01688.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 754
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 194 DLEMRESRRYKEKKEVVEPEADPERDQRT---VFAYQMPLKATERDVYEFFSKAGKVRDV 250
D R SR +++ ++E + +P ++ +F + + D+ E F G + DV
Sbjct: 307 DYLQRRSRELRKEIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDICELFGPVGPIVDV 366
Query: 251 RLI-MDR-------NSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
L +DR ++ +G+ +IEF D A+ LSG+ L G+P+ V + K
Sbjct: 367 SLPQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALELSGRHLCGRPITVNYANLTK 424
>gi|221502126|gb|EEE27870.1| glycine-rich RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 763
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 194 DLEMRESRRYKEKKEVVEPEADPERDQRT---VFAYQMPLKATERDVYEFFSKAGKVRDV 250
D R SR +++ ++E + +P ++ +F + + D+ E F G + DV
Sbjct: 307 DYLQRRSRELRKEIAMLEDDFNPNSINKSATRLFVGGLAYNTSRYDICELFGPVGPIVDV 366
Query: 251 RLI-MDR-------NSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEK 300
L +DR ++ +G+ +IEF D A+ LSG+ L G+P+ V + K
Sbjct: 367 SLPQIDRAIPNDSEDAFAVRGIAFIEFADRKDARTALELSGRHLCGRPITVNYANLTK 424
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 151
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 152 AFNGVMFGDRPLKINHSNNAIVKPPE 177
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|166240199|ref|XP_635459.2| hypothetical protein DDB_G0291063 [Dictyostelium discoideum AX4]
gi|165988479|gb|EAL61962.2| hypothetical protein DDB_G0291063 [Dictyostelium discoideum AX4]
Length = 2110
Score = 42.7 bits (99), Expect = 0.53, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 73 RRDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
R++ ++ R+ R R D ++ RE RER ++ KE+E+RE+ R+K
Sbjct: 1595 RKEIEKSESRENIRDSRSNDNNQSLSSSRE---------IRERDKELKEKEQREKEQRDK 1645
Query: 133 ERE-RERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
+RE RERD SR+ + +Q R +R ++++ ++ER+
Sbjct: 1646 DRENRERDNRDVRDSRNDQRGNQERDGGEPQQRRQQQQQQQERD 1689
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 123
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 124 AFNGVMFGDRPLKINHSNNAIVKPPE 149
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 141
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 142 AFNGVMFGDRPLKINHSNNAIVKPPE 167
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Query: 99 RERERETERDRERSRER-----REKEKERERRERRDREKERERERD 139
R RE+E +RDRER +ER R++EK+RER +D+EKE+E+ERD
Sbjct: 391 RLREKERDRDREREKERSKNKERDREKDRERDREKDQEKEQEKERD 436
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 18/115 (15%)
Query: 77 DRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRER-REKEKERERRERRDREKERE 135
+R RDR+ ER R DR+ R+R+RETER R+R ER R++E ER+R DRE ER+
Sbjct: 95 ERQRDRETERQR-----DRETERQRDRETERQRDRETERQRDRETERQR----DRETERQ 145
Query: 136 RERDGERRSSSRSRRSSSQSRRSSSRSR-----RERERESERERELELERERERE 185
R+R+ ER R R + Q R + R R R+R+RE+ER+R+ E ER+R+RE
Sbjct: 146 RDRETER---QRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRE 197
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 14/104 (13%)
Query: 99 RERERETERDRERSRER-REKEKERERRERRDREKERERERDGERRSSSRSRRSSSQSRR 157
R+R+RETER R+R ER R++E ER+R DRE ER+R+R+ ER R R + Q R
Sbjct: 96 RQRDRETERQRDRETERQRDRETERQR----DRETERQRDRETER---QRDRETERQRDR 148
Query: 158 SSSRSR-----RERERESERERELELERERERERELRERERDLE 196
+ R R R+R+RE+ER+R+ E ER+R+RE E R+R+R+ E
Sbjct: 149 ETERQRDRETERQRDRETERQRDRETERQRDRETE-RQRDRETE 191
>gi|195999452|ref|XP_002109594.1| hypothetical protein TRIADDRAFT_53780 [Trichoplax adhaerens]
gi|190587718|gb|EDV27760.1| hypothetical protein TRIADDRAFT_53780 [Trichoplax adhaerens]
Length = 1016
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 36/170 (21%)
Query: 42 RKREDSEEEEEEEKSRSGK-----RS--RRDEDEENGSRRDRDRDR------DRDKERHR 88
R +ED+ +E++ +++ GK RS RR+ D++ GS R ++ D+ KERH
Sbjct: 7 RTKEDTWKEDDLKRAIKGKDEGRHRSERRRNHDDDKGSSRHARKEEGGQVGDDKRKERHD 66
Query: 89 RDRDRDRDR----GRERERETERD-RERSRERREKEKERER-----------RERRDR-- 130
R RD+ R GRE E + +RD R RSRE R K R+ R+R+ +
Sbjct: 67 RPEHRDKHREAREGREHESKKDRDERHRSRENRHDRKIRQTKDDYGEDAKHDRDRKKKDD 126
Query: 131 --EKERERERDG---ERRSSSRSRRSSSQSRRSSSRSRRERERESERERE 175
E+ RER+RDG +R R + S R SSRS + +SER+ E
Sbjct: 127 NEERHRERKRDGKDADRERKHRDDKGDSHDRHRSSRSTANNQDDSERKLE 176
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 18/181 (9%)
Query: 23 DDSSSKKKAKREEKSERSYRKRE------DSEEEEEEEKSRSGKRSRRDEDEENGSRRDR 76
+DSS+ + ++ +KS R+ +RE E + E K R G R R+ + + R R
Sbjct: 381 NDSSTDSRREKRDKSTRTPPRRETEKPTRSKERQRERSKQRLGSRERQRSKDARRNERHR 440
Query: 77 DRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREKER- 134
++R R KER + +DR R +R + +ER+ ++R+R +ER ++ KER+R + R R KER
Sbjct: 441 SKERQRSKERLKSKDRARSMERHKSKERQQSKERQRPKER-QRSKERQRSKERQRSKERL 499
Query: 135 ---ERERDGER-----RSSSRSRRSSSQSRRSSSRSR-RERERESERERELELERERERE 185
ER R ER R+ S+ R+ S + RS R R +ER R ER+R E R +ER+
Sbjct: 500 RSKERVRSKERLRSKERARSKERQRSKERVRSKERLRSKERARSKERQRSKERVRSKERQ 559
Query: 186 R 186
R
Sbjct: 560 R 560
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 101/275 (36%), Gaps = 57/275 (20%)
Query: 132 KERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERERERERELRER 191
K+RER + + S E + +E
Sbjct: 88 KDRERPK-----------------------------KPSPYWDVPPAGYETVSPADYKEL 118
Query: 192 ERDLEMRESRRYKEKKEVVEPEADP------ERDQRTVFAYQMPLKATERDVYEFF---- 241
+RD ++ ++P A P R R ++ +P TE+ + +FF
Sbjct: 119 QRDGKVPAQGVPAAAGLGIDPTAAPGSGSQITRQSRRLYVGNIPFGITEQAMMDFFNEKM 178
Query: 242 -------SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMV- 293
+ V V++ D+N ++EF + A+A G + Q + +
Sbjct: 179 VTTGLTQANGDPVLAVQINFDKN------FAFLEFRSIEETTNAMAFDGIMFQNQALKIR 232
Query: 294 KPSEAEKNLVQSNTSAGGTATGPYGAI----DRKLYVGNLHFNMTETQLRKLFEPFGPVE 349
+P + + N+SA G + KL++G L +TE Q+++L + FG ++
Sbjct: 233 RPKDYQPPTGDPNSSANIHVPGVISTVVPDTPHKLFIGGLPNYLTEDQVKELLQSFGELK 292
Query: 350 LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALN 384
L D TG KG+ F ++ +E A + LN
Sbjct: 293 AFNLVKDSATGLSKGYAFCEYVVVEVTDQAIAGLN 327
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 494 IGSPSECLLLKNMFDPAMETDPDFDLEIQGDVEEECSKYGRVKHI-------YVDKRSAG 546
+G +E L L NM D + +I DV E SK VK + VD G
Sbjct: 373 LGEVTEILQLMNMVTEEELVDDEEYEDIIEDVRAEVSKIAPVKSLEIPRPIEGVDVAGVG 432
Query: 547 FVYLRFESTEAAASAQRAMHMRWFARRLISAIFMKPEDYE 586
+Y+ F + + AQ+++ R FA R++ F PE Y
Sbjct: 433 KIYIEFHNLDDCLKAQQSLAGRKFANRVVMTSFYPPESYH 472
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 242
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 243 AFNGVMFGDRPLKINHSNNAIVKPPE 268
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 242
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 243 AFNGVMFGDRPLKINHSNNAIVKPPE 268
>gi|85111588|ref|XP_964008.1| hypothetical protein NCU02052 [Neurospora crassa OR74A]
gi|28925766|gb|EAA34772.1| predicted protein [Neurospora crassa OR74A]
gi|38566902|emb|CAE76206.1| related to TSM1-component of TFIID complex [Neurospora crassa]
Length = 1870
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 SSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENGSRRDRDRDR-DRD 83
+ S K++ + + Y E+E+ K R R R + E + S + R++DR D D
Sbjct: 1538 APSSPKSRMQSPAGNGYGSSGSYAEKEQRNKERDRDRERDRDRERDSSSKFREKDRNDHD 1597
Query: 84 KERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD-----------REK 132
+ER+R +R++++ RERER+ E DRE R R EKER+R + R+ R +
Sbjct: 1598 RERYRGGAEREKEKYRERERDRESDREHERPR---EKERDREKYRERGDRDSDRERDRPR 1654
Query: 133 ERERERDGERRSSSRSRRSS 152
E+ RE+ +R S R R++
Sbjct: 1655 EKYREKGTDRGDSDRGGRTT 1674
>gi|170108674|ref|XP_001885545.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164639421|gb|EDR03692.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 568
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 55/211 (26%)
Query: 223 VFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF------------- 269
V+ + + RD+ EF AG+V +++ SKG G +EF
Sbjct: 166 VYVGNLSYEVKYRDLMEFMRGAGEVLFAEVLVTPTGV-SKGCGIVEFASQEDAQRAVREL 224
Query: 270 ---------------------YDVMSVP--MAIALSGQLLLGQPVMVKPSEAEKNLVQSN 306
+ VP + +A++GQ L P P N +
Sbjct: 225 SEQPLLGRPVFIREDRETEARFGATPVPGKIGMAMAGQGLHAAP---PPRPPSHNYFGTQ 281
Query: 307 TSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIET-GQCKGF 365
+ G +LYVGNL + L+ LF G +++ ++I G+ KG
Sbjct: 282 ANPG-----------NQLYVGNLPYQAGWQDLKDLFRTAG--NIIRADINIGADGRPKGS 328
Query: 366 GFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
G V F + A+ A S +G + GRTL+V
Sbjct: 329 GTVVFETPKDAQQAISMYHG-FDWYGRTLEV 358
>gi|336463459|gb|EGO51699.1| hypothetical protein NEUTE1DRAFT_70654 [Neurospora tetrasperma FGSC
2508]
Length = 1870
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 10/86 (11%)
Query: 73 RRDRDRDR-----DRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRE 126
R D DR+R +R+KE++R R+RDR+ DR ER RE ERDRE+ RER +++ +RER
Sbjct: 1591 RNDSDRERYRGGAEREKEKYRERERDRESDREHERPREKERDREKYRERGDRDSDRERDR 1650
Query: 127 RRDREKERERERDGERRSSSRSRRSS 152
+E+ RE+ +R S R R++
Sbjct: 1651 ----PREKYREKGTDRGDSDRGGRTT 1672
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 147 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 204
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 205 AFNGVMFGDRPLKINHSNNAIVKPPE 230
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 222
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 223 AFNGVMFGDRPLKINHSNNAIVKPPE 248
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 201 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 258
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 259 AFNGVMFGDRPLKINHSNNAIVKPPE 284
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 126
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 127 AFNGVMFGDRPLKINHSNNAIVKPPE 152
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 126
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 127 AFNGVMFGDRPLKINHSNNAIVKPPE 152
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|307183144|gb|EFN70061.1| Protein split ends [Camponotus floridanus]
Length = 4330
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDI-ETGQCKGFGFVQFAQLEHAKAAQ 380
R L++GNL ++T ++LRK FE FG E+++ +DI + G + F Q++ + A
Sbjct: 379 RTLFIGNLEKDVTASELRKHFEQFG--EIIE--IDIKKQGAVSSYAFCQYSDIGSVVKAM 434
Query: 381 SALNG 385
+++G
Sbjct: 435 RSMDG 439
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 114/282 (40%), Gaps = 46/282 (16%)
Query: 123 ERRERRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERERELELERER 182
++ R R D ++ +SR+SS R+ S ++ +++ + +L+ ++
Sbjct: 99 NKKRSRSPPASRSGRGD-PFTATPQSRKSSLWDRQPDQESPPSMSQQVQQQMQQQLDPQK 157
Query: 183 ERERELRERERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFS 242
++SRR ++ +P T+ ++ EFF+
Sbjct: 158 ---------------KQSRR--------------------IYVGNIPPGITDSELIEFFN 182
Query: 243 KAGKVRDVRL-----IMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMV-KPS 296
A ++ + ++ K +IEF A+ G L + + +P
Sbjct: 183 AAVLAANLNVKPGPPVVFCQINAPKCFAFIEFRTPEEATNAMRFDGITLKNYTLKIRRPK 242
Query: 297 EAEKNLVQSNTSAGGTATGPYGAID--RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLP 354
+ +++ +NTSA T P D K++VG L N+ E Q++ L +G ++ L
Sbjct: 243 DYQQSNDPTNTSALPTIV-PTNVPDSEHKIFVGGLPSNLNEEQVKTLLSAYGKLKAFNLV 301
Query: 355 LDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIVGRTLKV 396
D TG KG+ F ++ + A ++LNG + + + L V
Sbjct: 302 KDTNTGISKGYAFCEYLDPDVTDQACASLNG-ISLADKNLIV 342
>gi|350297324|gb|EGZ78301.1| hypothetical protein NEUTE2DRAFT_80725 [Neurospora tetrasperma FGSC
2509]
Length = 1870
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 74 RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDRERSRERREKEKERERRERRD---- 129
R++DR+ D D+ER+R +R++++ RERER+ E DRE R R EKER+R + R+
Sbjct: 1587 REKDRN-DSDRERYRGGAEREKEKYRERERDRESDREHERPR---EKERDREKYRERGDR 1642
Query: 130 -------REKERERERDGERRSSSRSRRSS 152
R +E+ RE+ +R S R R++
Sbjct: 1643 DSDRERDRPREKYREKGTDRGDSDRGGRTT 1672
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 202
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 203 AFNGVMFGDRPLKINHSNNAIVKPPE 228
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 266
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 267 AFNGVMFGDRPLKINHSNNAIVKPPE 292
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|223647752|gb|ACN10634.1| WD repeat-containing protein 60 [Salmo salar]
Length = 1090
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 79/144 (54%), Gaps = 21/144 (14%)
Query: 69 ENGSRRDRDRDRDRDKERHRRDRDRDRDRGRER-----ERETERDRERSRERREKEKERE 123
E S R DRDR R++ER RDRDR RE+ ERE ++ ER ++R +K+KER+
Sbjct: 184 ERDSERRSDRDRKRNEERAEGGRDRDRGHDREKRDGHKEREYVKESERYKDRSQKDKERK 243
Query: 124 RR----ERRDREKERE-RERDGERRSSSR------SRRSSSQSRRSSSRSRR-ERERESE 171
R E +++ERE RE+ G+ + ++ + +SRR SR ERER
Sbjct: 244 ERHTDKEHSGQKEEREYREQHGKEKEERERRHKERAQHDTGESRRHGGESREVERER-VH 302
Query: 172 RER---ELELERERERERELRERE 192
RER + E E +R++ RE R RE
Sbjct: 303 RERKGPDGEREGKRDKHRERRHRE 326
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|256092928|ref|XP_002582129.1| SFRS11 protein [Schistosoma mansoni]
gi|353228828|emb|CCD74999.1| putative sfrs11 protein [Schistosoma mansoni]
Length = 581
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLI---MDRNSRRSKGVGYIEFYDVMSVPM 277
RT+ + K T V EFF+K +VR VR+ DR Y+EF S+
Sbjct: 166 RTILVTNLDPKTTGDQVLEFFNKHAEVRCVRMAGTDFDR-------AAYVEFTQQPSIIK 218
Query: 278 AIALSGQLLLGQPVMVKPSEA 298
A L G L G+ +MV+ S
Sbjct: 219 AFGLMGATLNGRQIMVQHSNC 239
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 221 RTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIA 280
RTVF + + T + FFS G ++ +R M + + YIEF + ++ A+
Sbjct: 161 RTVFVNNLDPEITAEMLLSFFSSCGDIKYIR--MGGDDGKPTRYAYIEFAETQAIVSALQ 218
Query: 281 LSGQLLLGQPVMVKPSEAEKNLV 303
SG + G+P+ V S KN V
Sbjct: 219 YSGAIFGGKPIKVTHS---KNAV 238
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|341883737|gb|EGT39672.1| hypothetical protein CAEBREN_30591 [Caenorhabditis brenneri]
Length = 1195
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 81/145 (55%), Gaps = 16/145 (11%)
Query: 66 EDEENGSRRDRDRDRDRD----KERHRRDRDR-----DRDRGRERERETERDRERSRERR 116
EDE+ G +++++ +++ D ER R +DR D D + + +E+ R + +R+
Sbjct: 849 EDEKKGRKKEKNDEKNIDLSDSSERKERKKDRKYDEYDEDDRKSKSKESARKYDEDADRK 908
Query: 117 EKEKERERR--ERRDREKERERERDGERRSSSRSRRSSSQSRRSSSR--SRRERERESER 172
E++K RERR E D++KER+R+R E S + + + +R S+ R + ERE R
Sbjct: 909 ERKKGRERRGDEEHDKKKERKRDRSAEAYDSDKLQEPKIKIKREESKKEDRSDPEREKIR 968
Query: 173 ER---ELELERERERERELRERERD 194
R + E ER R+ +R R+R+RD
Sbjct: 969 RRDDYDKEKERRRDGDRNERDRKRD 993
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 219 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 278
D + + + ATE + E F KA +R + +N R+KG +IEF V A
Sbjct: 472 DSKVLVVNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFIEFSSVEDAKEA 526
Query: 279 I-ALSGQLLLGQPVMVKPSEAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQ 337
+ + + + G+ + ++ S+ SA + L+V L + TE
Sbjct: 527 MDSCNNTEIEGRSIRLEFSQGSGPQGGRGGSAQ----------SKTLFVRGLSEDTTEET 576
Query: 338 LRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFA 371
L++ F+ G V ++ D +TG KGFGFV F+
Sbjct: 577 LKEAFD--GSVN-ARIVTDRDTGASKGFGFVDFS 607
>gi|221053658|ref|XP_002258203.1| protein kinase [Plasmodium knowlesi strain H]
gi|193808036|emb|CAQ38740.1| protein kinase, putative [Plasmodium knowlesi strain H]
Length = 1367
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 25/125 (20%)
Query: 95 RDRGRERERETERDRERSRERREKE------KERERRERRDREKERERERDGERRSSSRS 148
RD G +RE+ RDRER + +EK+ KE+ E R + +RDG R SR
Sbjct: 1072 RDAGVQREKPPLRDRERVTDAKEKKGKTYKMKEQHMEEDHGRYGKYGTQRDGSFRGDSRW 1131
Query: 149 RR--SSSQSRRSSS-------------RSRRERERESERERELELERERERE---RELRE 190
RR SS +SR SS+ R R R+ S ER + +R RERE R+ E
Sbjct: 1132 RREESSGRSRHSSTREGGGYHTNSYRGRVGRIRDSSSRAERSMH-DRSREREWYKRDYAE 1190
Query: 191 RERDL 195
R RD+
Sbjct: 1191 RGRDM 1195
>gi|400601583|gb|EJP69226.1| pre-mRNA-splicing factor 38B [Beauveria bassiana ARSEF 2860]
Length = 812
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 20 KQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSRRDEDEENG------SR 73
+ DDDS S+ R+ +S + + D E + E+ + G+RSR E+ SR
Sbjct: 533 RHDDDSHSRS---RKHRSRKHSSRHGDEEVQHEKGTTGGGERSRSASPEDGAKKTSRHSR 589
Query: 74 RDRDRDRDRDKERHRRD 90
R+RD DR RDK+RHR D
Sbjct: 590 RERDSDRHRDKDRHRGD 606
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 242
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 243 AFNGVMFGDRPLKINHSNNAIVKPPE 268
>gi|307166380|gb|EFN60517.1| Proactivator polypeptide [Camponotus floridanus]
Length = 2140
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
Query: 7 EYLEKTVEEQR---QQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGKRSR 63
E ++KT E+R +D D SK+K+++ EKS+RS R+ S +E++ +KS++G S
Sbjct: 1832 EVVKKTKREKRDGSTDSEDSDGESKRKSRKLEKSKRS---RKASTDEDKSDKSKAGSSSD 1888
Query: 64 RDEDEENGSRRDRDRDRDRDKERHRRDRDRDRDRGRERE 102
++D+++ + + RDR + DR +DR R+R+
Sbjct: 1889 SEDDKKHSDKNKKSRDRTDSTD----DRSKDRKDSRKRD 1923
>gi|156093490|ref|XP_001612784.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801658|gb|EDL43057.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1084
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 74 RDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
RD +RDR R+ ER R RD +RDR R ER+R +RD ER R RE E++R+R RDR +
Sbjct: 770 RDTERDRPREAERDRQRDVERDRPRETERDR--QRDAERDRP-RETERDRQRDAERDRPR 826
Query: 133 ERERER 138
E ERER
Sbjct: 827 ETERER 832
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE------- 349
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYI 173
Query: 350 ------LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
LV+L D ET + +G+ F+++ K A +G+
Sbjct: 174 LGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 216
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 297 EAEKNLVQSNTSAGGTATGPYGAIDRKLYVGNLHFNMTETQLRKLFEPFGPVE------- 349
E +K QS+ +A G PY + L+V L++ +E ++++ FE +GP++
Sbjct: 121 ELQKYDPQSDPNATGD---PY----KTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYI 173
Query: 350 ------LVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGK 386
LV+L D ET + +G+ F+++ K A +G+
Sbjct: 174 LGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGR 216
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 10/75 (13%)
Query: 74 RDRDRDRDRDKERH-RRDRDRD--RDRGRE----RERETERDRERSRER---REKEKERE 123
RDR R+ +RD++R RDR R+ RDR RE R+RE ERDR+R ER RE E++R+
Sbjct: 705 RDRPREAERDRQREAERDRQREAERDRPREAERDRQREAERDRQREAERDRQREAERDRQ 764
Query: 124 RRERRDREKERERER 138
R RDR++E ER+R
Sbjct: 765 REAERDRQREAERDR 779
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 239
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 240 AFNGVMFGDRPLKINHSNNAIVKPPE 265
>gi|195490501|ref|XP_002093167.1| GE20934 [Drosophila yakuba]
gi|194179268|gb|EDW92879.1| GE20934 [Drosophila yakuba]
Length = 1080
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 74 RDRDRDRDRDKERHR-RDRDRDRDRGRERERETERDRERSRERREKEKERERRERRDREK 132
R+R +DR R KE+HR RDR R ++R R +ER+ ++R RSRER ++ KER+R +EK
Sbjct: 404 RERSKDRQRSKEKHRSRDRLRSKERQRSKERQRSKERPRSRER-QRSKERQR----SKEK 458
Query: 133 ERERER 138
+R +ER
Sbjct: 459 QRSKER 464
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 382 ALNGKLEIVGRTLKV 396
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ +A
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDMHSAYK 161
Query: 382 ALNGKLEIVGRTLKV 396
+GK +I GR + V
Sbjct: 162 HADGK-KIDGRRVLV 175
>gi|413957026|gb|AFW89675.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 150
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Query: 1 MEFDEYEYLEKTVEEQRQQKQDDDSSSKKKAKREEKSERSYRKREDSEEEEEEEKSRSGK 60
M+FDEYEYLEKTVE + SS + ++K ERS R+R +EE + R K
Sbjct: 1 MDFDEYEYLEKTVE---AFAAPANGSSPPGSGYKDK-ERSSRRRSTGGDEERDNVERRSK 56
Query: 61 RSRRDEDEENGSRRDRDRDRDRDKERHR 88
RSR +E RDRD+ERHR
Sbjct: 57 RSRPEE------------GRDRDRERHR 72
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 322 RKLYVGNLHFNMTETQLRKLFEPFGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQS 381
+ L+V ++++ +E++LR+ FE +GPV+ + + + G+ +G+ F+++ EH + S
Sbjct: 102 KTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEY---EHERDMHS 158
Query: 382 A 382
A
Sbjct: 159 A 159
>gi|312381631|gb|EFR27339.1| hypothetical protein AND_06021 [Anopheles darlingi]
Length = 542
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 34/103 (33%)
Query: 96 DRGRERERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSRRSSSQS 155
DR R+RE E +R RER E E ER ++R+ E ER R
Sbjct: 285 DRVRKRELELDRARER-------ELELERAQKRELELERAR------------------- 318
Query: 156 RRSSSRSRRERERESERERELELEREREREREL-RERERDLEM 197
+RE E + RERELEL+R RERE EL R R+R+LE+
Sbjct: 319 -------KRELELDRVRERELELKRVRERELELERARKRELEL 354
>gi|348500896|ref|XP_003438007.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Oreochromis
niloticus]
Length = 461
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 49 EEEEEEKSRSGKRSR---RDEDEENGSRRDRDRDR----DRDKERHRRDRDRDRDRGRER 101
E +E+E+ RS+ RD ++ G+ R+R RD+ + D RH+ DR+R RD + +
Sbjct: 331 ERKEKERDGGDDRSKRKDRDHHKDRGTERERSRDKKSRGETDDRRHKDDRERHRDERKAK 390
Query: 102 ERETERDRERSRERREKEKERERRERRDREKERERERDGERRSSSRSR---RSSSQSRRS 158
R RER + +EK R+R R +ER+RERDGE+RS RSR RS Q S
Sbjct: 391 RSSRSRSRERRHKSGAEEKSRKR--ERSHSRERDRERDGEQRSHKRSRSKERSHHQRESS 448
Query: 159 SSRSRRER 166
+ SR R
Sbjct: 449 NDHSRHRR 456
>gi|320545415|ref|NP_001097475.2| CG7971, isoform F [Drosophila melanogaster]
gi|318069094|gb|ABW08438.2| CG7971, isoform F [Drosophila melanogaster]
Length = 1655
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 53/212 (25%)
Query: 79 DRDRDKERHR-----RDRDRDRDRGRERERETERDRERSRER-REKEKERERRE------ 126
DR R KE+HR + D+ RDR +R +E +R ER R + R++ KERER +
Sbjct: 726 DRQRSKEKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSR 785
Query: 127 ----------RRDREKERERERDGERRSSSRSRRSSSQSRRSSSRSRRERERESEREREL 176
+DR+ +ER+R ER+ S R S+ ++ S +R RE ++R+
Sbjct: 786 ERRRSKEGQLSKDRQGLKERQRSNERKRS--KERQPSKEKQRSRERQRSREPLQSKDRQR 843
Query: 177 ELERERERERELRE-------RERDLEMRESRRYKE--------------------KKEV 209
ER+R RER +E RER + R+ RR++ K
Sbjct: 844 SKERQRSRERPAKEARPTRSPRERSSKSRDDRRHRSPTNASRKQKDDTKLSRNARFKSPA 903
Query: 210 VEPEADPERDQRTVFAYQMPLKATERDVYEFF 241
PEA P++ T A+ P KA E V +
Sbjct: 904 HSPEAPPKKSVPTP-AFN-PFKAAEDTVNDIL 933
>gi|432852870|ref|XP_004067426.1| PREDICTED: intersectin-2-like [Oryzias latipes]
Length = 1789
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 26 SSKKKAKREEKSERSYRKREDSEEEEEEE-----KSRSGKRSRRDEDEENGSRRDRDRDR 80
+++++ +R+ K E R+R D ++++E+E K ++ KRS E E G++ + DR
Sbjct: 388 AAQRELERQRKVELEKRRRSDLQKKKEQEQNEIIKLKAKKRSLEMELEAVGNKHRQISDR 447
Query: 81 DRDKERHRRDRDRDRDRGRERERETERD----RERSRERREKEKERERRERRDREKERER 136
RD ++ + + D +R+ ++D +++ E + K + ++R EK R
Sbjct: 448 LRDIRNKKKLQKTELDLTNQRKETCQQDITSLQKQIEEFQRKLSQLTPEQKRLSEKLRNM 507
Query: 137 ERDGERRSSSRSRRSSSQSRRSSSRSRRERERESERE---RELELERERERERELRERER 193
+ SS + + ++ ++ + RE+ E+E R E+ER + ++LRE +R
Sbjct: 508 AVNNLPVSSIATMKVTAAEKKGTCMKLREQLEALEKESSTRLAEIERYNKDMQDLRESQR 567
Query: 194 DLE--MRESRRYKEKKE 208
+ + RR KE+K+
Sbjct: 568 KQQAALENLRRIKEEKQ 584
>gi|47213693|emb|CAF94586.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1032
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 58 SGKRSRRDEDEENGSR-RDRDRDRDRDKERHRRDRDRDRDRGRERERETERDR-ERSRER 115
+G+R R+ + E R +D++R RD++KER R ++D++R R E+ER R E S E
Sbjct: 119 TGRRDRKQDVVEKHERVKDKERHRDKEKERDARKEEKDKERRRHHRAESERRRQEESGEG 178
Query: 116 REKEKERERRERR-DREKE----RERERDGERR 143
K++ER++RE+ DRE+ RER+ D ERR
Sbjct: 179 GFKKQERDKREKHGDRERHTDEYRERKSDRERR 211
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 221 RTVFAYQMPLKATERD-VYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 279
RTV+ + + T D + EFF + G+V+ VR+ D + ++EF D SVP A+
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDET--QPTRFAFVEFADQNSVPRAL 277
Query: 280 ALSGQLLLGQPV--------MVKPSE 297
A +G + +P+ +VKP E
Sbjct: 278 AFNGVMFGDRPLKINHSNNAIVKPPE 303
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,825,387,718
Number of Sequences: 23463169
Number of extensions: 409295890
Number of successful extensions: 12973696
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 83208
Number of HSP's successfully gapped in prelim test: 92391
Number of HSP's that attempted gapping in prelim test: 5437723
Number of HSP's gapped (non-prelim): 2681260
length of query: 591
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 443
effective length of database: 8,886,646,355
effective search space: 3936784335265
effective search space used: 3936784335265
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)