BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007744
(591 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74113|CDC45_SCHPO Cell division control protein 45 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sna41 PE=1 SV=1
Length = 638
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 185/638 (28%), Positives = 316/638 (49%), Gaps = 68/638 (10%)
Query: 9 SFYTRLRESATASSDSPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHK 68
S Y +++E A+ S + +F + D D+LCA K++ +L+ D + + PVS ++++ +
Sbjct: 10 SAYLKIKE-ASVSGGCTVQLFVAL-DPDALCACKLLSTLLKGDFISHKIRPVSGYRDLEQ 67
Query: 69 YAGPNLGSSSETQITILLINWGSHRDLKRVLNLGPKARVFVVDSHRPIHLHNLSDGNDNV 128
A L +E I+L+N G+ DL L ++V+DSHRP +L+N+ N N+
Sbjct: 68 -ANKTLLEQNEDIKFIILLNCGTMVDLNNYLVSMEDVSIYVIDSHRPHNLNNIYIEN-NI 125
Query: 129 VVLYTPDDEQQADLAYDFNVSALAHAIDLGIDDEDSDSDEEDDSESEGE----------E 178
V D E+ + +D + +H + D+E+SDS E + E E + +
Sbjct: 126 FVFDDGDIEEDMNKIHDAWYAFNSHELS---DEENSDSSNEREEEVEDDNRSVESYSSSD 182
Query: 179 NEGGSRKR-------RRVDLERGEDPEKVFKRMKREYYRMGTFHGKPSGCLMYDLSHSLR 231
+ SR+R RR +++ K F + EYY G+++G+ +++ ++ L
Sbjct: 183 YQARSRRRFSEETTQRRAEIKEKRKKRKEFASILSEYYEKGSWYGESITNILFAVASMLG 242
Query: 232 KNTNELLWLACVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLDAVTSVTLKDGTKIR 291
+ N++LWLA V LT +H + + + + L+ +N + + K
Sbjct: 243 REDNDMLWLAIVGLTCLEIHCQSSKKYFNRSYSLLKDEVNRLNPSPLENQIVGRAHGK-- 300
Query: 292 APESARIAYDDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALV 351
P I +DE R ML++ W+L+DSML S+Y+ ++L WS+ G K+L LLA+MG +LV
Sbjct: 301 TPHDQSIRLEDEFRFMLVRHWSLYDSMLHSAYVGSRLHIWSEEGRKRLHKLLAKMGLSLV 360
Query: 352 DCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTAL 411
+C+Q + +MN+++K+ +K +RF P YGL D + SF R +G+ +SA+DV Y ++AL
Sbjct: 361 ECKQTYIHMNMDLKKTLKSSLKRFAPFYGLDDVIFHSFTRTYGFKCTLSASDVSYAISAL 420
Query: 412 LE--------------------------SFVTSDGSCASKQFGVAYDALSLSNLDQLKSG 445
LE F + F AYDAL ++D L+
Sbjct: 421 LEMGNTGVLLQSKTVARSPDMTEEEYLEKFENAQNQEWLHNFYDAYDALD--DVDSLERA 478
Query: 446 MQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFLGYPQALTKFCYFLMD 505
++ A+ +QRAI+R G +++ AI++ R FR+ + + D K +P ALTK ++ +
Sbjct: 479 LKLAMHLQRAIVRTG-ITLLEKRAIKTLRSFRFGLINEGPDLKIFMHPLALTKMSLWIAE 537
Query: 506 ALKEK-----GARMKPLVCACLAQEPNKVLIVGV-----CGKPRLGALRG---NAFGVSF 552
A+ E+ R PLV A +E N+ LIVG G N FGV+F
Sbjct: 538 AINEQEREFGKLRHLPLVLAAFVEEKNRYLIVGTSTSAFTSNEDDDDDDGHGHNRFGVAF 597
Query: 553 RNAATEIGAEFFHELFESSWIILDRGAVNSFMVRLTEK 590
+ A A + FE+S I + + F+ L+ K
Sbjct: 598 QEVANMTSATLQMDCFEASVIECQKSDLGVFLESLSFK 635
>sp|O75419|CDC45_HUMAN Cell division control protein 45 homolog OS=Homo sapiens GN=CDC45
PE=1 SV=1
Length = 566
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 277/581 (47%), Gaps = 48/581 (8%)
Query: 10 FYTRLRESATASSDSPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHKY 69
F + R+ S ++ SDVD+LCA KI+ + + D V+Y PVS +QE+
Sbjct: 2 FVSDFRKEFYEVVQSQRVLLFVASDVDALCACKILQALFQCDHVQYTLVPVSGWQELE-- 59
Query: 70 AGPNLGSSSETQITILLINWGSHRDLKRVLNLGPKARVFVVDSHRPIHLHNLSDGNDNVV 129
E +LIN G++ DL +L FV D+HRP+++ N+ ND +
Sbjct: 60 --TAFLEHKEQFHYFILINCGANVDLLDILQPDEDTIFFVCDTHRPVNVVNVY--NDTQI 115
Query: 130 VLYTPDDEQQADLAYDFNVSALAHAIDLGIDDEDSDSDEEDDSESEGEENEGGSRKRRRV 189
L D+ D V A ED DEE+D E G +++G +R
Sbjct: 116 KLLIKQDD-------DLEVPAY----------EDIFRDEEEDEEHSGNDSDGSEPSEKRT 158
Query: 190 DLERGEDPEKVFKRMKREY----------YRMGTFHGKPSGCLMYDLSHSLRKNTNELLW 239
LE + + +R +RE+ Y +HG S +M++L+ L K+ N++LW
Sbjct: 159 RLEEEIVEQTMRRRQRREWEARRRDILFDYEQYEYHGTSSAMVMFELAWMLSKDLNDMLW 218
Query: 240 LACVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPESARIA 299
A V LTDQ+V +++T +Y V L++H++ + + +D + + RI+
Sbjct: 219 WAIVGLTDQWVQDKITQMKYVTDVGVLQRHVSRHNHRN-------EDEENTLSVDCTRIS 271
Query: 300 YDDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQY 359
++ + RL+L Q W+L DS+ +SY A + K WS +G K+L+ LA MG L +QKFQ
Sbjct: 272 FEYDLRLVLYQHWSLHDSLCNTSYTAARFKLWSVHGQKRLQEFLADMGLPLKQVKQKFQA 331
Query: 360 MNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVTSD 419
M++ +K +++ E ++G+ D ++F G+ + A+DVV+ +L+ES D
Sbjct: 332 MDISLKENLREMIEESANKFGMKDMRVQTFSIHFGFKHKFLASDVVFATMSLMES-PEKD 390
Query: 420 GSCASKQFGVAYDALSLSNLDQLKSGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWV 479
GS + F A D+LS SNLD+L G++ A K RA + ++ + + I G
Sbjct: 391 GS-GTDHFIQALDSLSRSNLDKLYHGLELAKKQLRATQQTIASCLCTNLVISQGPFLYCS 449
Query: 480 KLEDSADTKFLGYP----QALTKFCYFLMDALKEKGARMKPLVCAC-LAQEPNKVLIVGV 534
+E + D P + + K + ++ PLV A L+ E V +VG+
Sbjct: 450 LMEGTPDVMLFSRPASLSLLSKHLLKSFVCSTKNRRCKLLPLVMAAPLSMEHGTVTVVGI 509
Query: 535 CGKPRLGALRGNAFGVSFRNAATEIGAEFFHELFESSWIIL 575
+ + R N FG +F AA + H F+ S I L
Sbjct: 510 PPETD-SSDRKNFFGRAFEKAAESTSSRMLHNHFDLSVIEL 549
>sp|Q55GA4|CDC45_DICDI Cell division control protein 45 homolog OS=Dictyostelium
discoideum GN=cdc45 PE=3 SV=1
Length = 644
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 213/397 (53%), Gaps = 24/397 (6%)
Query: 213 TFHGKPSGCLMYDLSHSLRK-NTNELLWLACVSLTDQFVHERLTDERYQAGVMELEQHIN 271
T++GK + MY LS L K N ++LLW A + LTDQF+HE++T + Y+ ++ I
Sbjct: 239 TYYGKSAAVSMYSLSTFLNKQNLDDLLWYAVLGLTDQFIHEKITLDSYEQQYKNFKELIL 298
Query: 272 SSGNLDAVTSVTLK------------DGTKIRAPESA-----RIAYDDEPRLMLLQEWNL 314
++ D + +G R P S +I D+ R ML + WNL
Sbjct: 299 NNYPTDGDDDQEERYRPGNDEDDYDENGDLKRHPSSMFLHGDKIIPSDDFRFMLYRHWNL 358
Query: 315 FDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFER 374
++S+ S Y+A KL+ W G +L+ L A MG L +QK+ MN+ K+++K
Sbjct: 359 YESLFNSRYVACKLRVWKAKGRFQLESLFAMMGIPLDQVKQKYNSMNVHYKKQLKQLLAI 418
Query: 375 FLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLES----FVTSDGSCASKQFGVA 430
P++GL + Y+ SFL+ + +S +SA+D VY VTAL+ES SD + F A
Sbjct: 419 NGPKFGLVNLYFNSFLKKYSNNSEISASDTVYAVTALMESDNLESDQSDQDIWEQNFWEA 478
Query: 431 YDALSLSNLDQLKSGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFL 490
YD++S N+D LK G++Q+I++Q+ I RQ ++ I K I SG FR+ + +S+D K+
Sbjct: 479 YDSISNKNIDLLKIGLKQSIQLQKEITRQVTSMIEKRSVILSG-PFRYAFITESSDLKYF 537
Query: 491 GYPQALTKFCYFLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLGALRGNAFGV 550
+P ALTK F+MDA G +P + L + N LIVG+ G ++ N FG
Sbjct: 538 IHPLALTKLGLFMMDAFISMGKAKRPFLIGALNENKNSYLIVGISGSHSTD-IQSNTFGE 596
Query: 551 SFRNAATEIGAEFFHELFESSWIILDRGAVNSFMVRL 587
FR +A A F ++ F++S + + + ++ F+ L
Sbjct: 597 YFRKSAEYTDATFKYQSFDTSIVEVSKTDLHKFVEHL 633
>sp|Q9Z1X9|CDC45_MOUSE Cell division control protein 45 homolog OS=Mus musculus GN=Cdc45
PE=2 SV=2
Length = 566
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 172/584 (29%), Positives = 289/584 (49%), Gaps = 54/584 (9%)
Query: 10 FYTRLRESATASSDSPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHKY 69
F T R+ + + ++ SDVD+LCA KI+ + + D V+Y PVS +QE+
Sbjct: 2 FVTDFRKEFYETVHNQRVLLFVASDVDALCACKILQALFQCDHVQYTLVPVSGWQELETA 61
Query: 70 AGPNLGSSSETQITILLINWGSHRDLKRVLNLGPKARVFVVDSHRPIHLHNLSDGNDNVV 129
+ E +LIN G++ DL +L + FV D+HRP+++ N+ ND +
Sbjct: 62 YLEH----KEQFSYFILINCGANVDLLDILQPDEDSIFFVCDTHRPVNVVNVY--NDTQI 115
Query: 130 VLYTPDDEQQADLAYDFNVSALAHAIDLGIDDEDSDSDEEDDSESEGEENEGGSRKRRRV 189
L ++ AYD D+ D+ +++ED S+S+G+ +E S KR R+
Sbjct: 116 KLLIKQEDDLEVPAYD----------DIFRDE----AEDEDLSDSDGDGSEP-SEKRTRL 160
Query: 190 DLERGEDPEKVFKRMKREY--------YRMGTFHGKPSGCLMYDLSHSLRKNTNELLWLA 241
+ E E K +R + E Y ++G S +M+DL+ + K+ N++LW A
Sbjct: 161 EEEIVERNRKRRQRREWEARRKDILFDYEQYEYYGTSSAMVMFDLAWMMSKDLNDMLWWA 220
Query: 242 CVSLTDQFVHERLTDERYQAGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPESARIAYD 301
V LTDQ+VH+++T +Y V L++H++ + + L + + RI+++
Sbjct: 221 IVGLTDQWVHDKITQMKYVTDVGILQRHVSRHNHRNEAEENML-------SVDCTRISFE 273
Query: 302 DEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMN 361
+ L+L Q W+L +S+ +SY A + K WS +G K+L+ LA MG L +QKFQ M+
Sbjct: 274 YDLCLVLYQHWSLHESLYNTSYTAARFKLWSVHGQKRLQEFLADMGLPLKQVKQKFQSMD 333
Query: 362 LEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVTSDGS 421
+ +K +++ E ++G+ D ++F G+ + A+DVV+ +L+ES DGS
Sbjct: 334 VSLKGNLREMIEESANKFGMKDMRVQTFSIQFGFKHKFLASDVVFATMSLMES-PEKDGS 392
Query: 422 CASKQFGVAYDALSLSNLDQLKSGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKL 481
+ F A D+LS SNLD+L G++ A K +A +Q A+ + + + S F + L
Sbjct: 393 -GTDHFIQALDSLSRSNLDKLYLGLELAKKHLQAT-QQTIASCLCTNLVTSQGPFLYCSL 450
Query: 482 -EDSADTKFLGYP--------QALTKFCYFLMDALKEKGARMKPLVCAC-LAQEPNKVLI 531
E + D P L F Y + K + ++ PLV A L+ E V +
Sbjct: 451 MEGTPDVTLFSKPASLSLLSRHLLKSFVY----STKNRRCKLLPLVMAAPLSVEQGTVTV 506
Query: 532 VGVCGKPRLGALRGNAFGVSFRNAATEIGAEFFHELFESSWIIL 575
VG+ + + R N FG +F AA + H F+ S I L
Sbjct: 507 VGIPPETD-SSDRKNFFGRAFEKAAESTSSRTLHNYFDLSVIEL 549
>sp|Q9YHZ6|CDC45_XENLA Cell division control protein 45 homolog OS=Xenopus laevis GN=cdc45
PE=1 SV=2
Length = 567
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 275/568 (48%), Gaps = 56/568 (9%)
Query: 26 LLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHKYAGPNLGSSSETQITIL 85
LL+ P DVD+LCA KI+ + + D V+Y PVS +QE+ E +
Sbjct: 21 LLVAP---DVDALCACKILQALFQCDHVQYTLVPVSGWQELETL----FLEHKEQFRYFV 73
Query: 86 LINWGSHRDLKRVLNLGPKARVFVVDSHRPIHLHNLSDGNDNVVVLYTPDDEQQADLAYD 145
LIN G++ DL L +A ++ D+HRPI + N+ ND+ V L D+ AYD
Sbjct: 74 LINCGANIDLLETLQPQEEAIFYICDTHRPIDVVNIY--NDSQVKLLIRQDDDLEIPAYD 131
Query: 146 FNVSALAHAIDLGIDDEDSDSDEEDDSESEGEENEGG--SRKRRRVDLERGEDPEKVFKR 203
D +D+E+D E G E++G S KRRR D E + ++
Sbjct: 132 -----------------DIFNDDEEDGEDSGNESDGAEPSGKRRRFDEAAVERRIERRRQ 174
Query: 204 MKREY---------YRMGTFHGKPSGCLMYDLSHSLRKNTNELLWLACVSLTDQFVHERL 254
+ Y +HG S +M++L+ + K++N++LW A V LTDQ+V +R+
Sbjct: 175 RREWEARRREIIFDYEQYEYHGTSSAMMMFELAWIMSKDSNDMLWWAIVGLTDQWVQDRI 234
Query: 255 TDERYQAGVMELEQHINSSG--NLDAVTSVTLKDGTKIRAPESARIAYDDEPRLMLLQEW 312
T +Y V L++H++ N D S+++ + RIA++ + RL L Q W
Sbjct: 235 TQMKYVTDVGTLQRHVSRHNHRNEDEENSLSI---------DCMRIAFEYDLRLSLYQHW 285
Query: 313 NLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEF 372
+L++S+ S Y + LK WS G KKL+ LA MG L +QKF M++ +K +++
Sbjct: 286 SLYESICNSCYTSATLKLWSLQGQKKLQEFLADMGMPLKQVKQKFNSMDISLKENLREML 345
Query: 373 ERFLPEYGLTDFYYRSFLRLHGYSSRVSAADVVYGVTALLESFVTSDGSCASKQFGVAYD 432
E ++G+ D ++F G+ ++ A+D+V+ V +LLE+ T + F A D
Sbjct: 346 EESANKFGMKDVRVQTFSVQFGFKNKFLASDIVFAVLSLLEN--TERDEKGTDNFIKALD 403
Query: 433 ALSLSNLDQLKSGMQQAIKVQRAILRQGSAAIMKSGAIRSGRKFRWVKLEDSADTKFLGY 492
+LS SNLD+L +G++ K+ AI + ++ I + + G +E + D K
Sbjct: 404 SLSRSNLDKLHTGLEMGKKLLCAIQQTVASCICTNLILSQGPFLYCYLMEGTPDVKMFSN 463
Query: 493 PQALTKFCY-----FLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLGALRGNA 547
P +L C F+ ++ + ++ A L E V++VG+ + + + N
Sbjct: 464 PISLCLLCKYLLKSFVCSTKNKRCKLLPLVLAAPLDAEKGTVIMVGIPPEAE-SSDKKNF 522
Query: 548 FGVSFRNAATEIGAEFFHELFESSWIIL 575
FG +F AA + H F+ S I L
Sbjct: 523 FGRAFEKAAESTSSRTLHNHFDMSIIEL 550
>sp|Q08032|CDC45_YEAST Cell division control protein 45 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC45 PE=1 SV=1
Length = 650
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/661 (23%), Positives = 286/661 (43%), Gaps = 110/661 (16%)
Query: 11 YTRLRESATASSDSPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHKYA 70
Y ++ ++++ S L+IF S ++D+LCA K++ + + V+ P+ + E+ ++
Sbjct: 12 YNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYSELRRHY 71
Query: 71 GPNLGSSSETQI-TILLINWGSHRDLKRVLNLGPKARV----------------FVVDSH 113
S + I ++LL+ +G DL+ L + P+ V +V+D+H
Sbjct: 72 -----SQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVLDAH 126
Query: 114 RPIHLHNLSDGNDNVVVLYTPDDEQQADLAYDFNVSALAHAIDLGIDDEDSDSDE--EDD 171
RP +L N+ ++ + D+ D A ++L DE+S DE D+
Sbjct: 127 RPWNLDNIF--GSQIIQCF---DDGTVDDTLGEQKEAYYKLLEL---DEESGDDELSGDE 178
Query: 172 SESEGEENEGGSRKRRR----------VDLERGED---PEKVFKRMKR------------ 206
+++ G ++E + +RG P + KR +R
Sbjct: 179 NDNNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLE 238
Query: 207 EYYRMGTFHGKPSGCLMYDLSHSLRKNTNELLWLACVSLTD-QFVHERLTDERYQAGVME 265
EYY GT +Y L ++ + LWL + T + ++ + Y E
Sbjct: 239 EYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDE 298
Query: 266 LEQHINSSGNLDAVTSVTLKDGTKIRAPESARIAYDDEPRLMLLQEWNLFDSMLCSSYIA 325
+++ SS N ++ P++ + + L LL+ +L+DS S+Y+
Sbjct: 299 VKRLTPSSRN-------------SVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVN 345
Query: 326 TKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFY 385
KL W++NG K+L + ARMG L Q+ + YM+ +KR++ F++ L YGL D
Sbjct: 346 AKLSLWNENGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDII 405
Query: 386 YRSFLRLHGYSSRVSAADVVYGVTALLESFVTSDGSCAS--------------------- 424
F+R GY +SA++ V +TALLE ++D
Sbjct: 406 RDGFVRTLGYRGSISASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQK 465
Query: 425 ---------KQFGVAYDALSLSNLDQLKSGMQQAIKVQRAILRQGSAAIMKSGAIRSGRK 475
F +++DAL ++ L G+Q A +QRAI G AI++ I+ R
Sbjct: 466 LTNLRKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTG-VAILEKKLIKHLRI 524
Query: 476 FRWVKLEDSADTKFLGYPQALTKFCYFLMDALKE-KGARMKPLVCACLAQEPNKVLIVGV 534
+R L+D D P L + +L++ E + ++ P+V A + + + L+ G+
Sbjct: 525 YRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGL 584
Query: 535 CGK-PR-LGALRG-----NAFGVSFRNAATEIGAEFFHELFESSWIILDRGAVNSFMVRL 587
+ PR L + N F ++F+ E A+ + FESS I + R ++ F+ +L
Sbjct: 585 TPRYPRGLDTIHTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKL 644
Query: 588 T 588
T
Sbjct: 645 T 645
>sp|Q99107|TSD2_USTMA Protein TSD2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TSD2
PE=2 SV=1
Length = 845
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 42/254 (16%)
Query: 201 FKRMKREYYRMGTFHGKPSGCLMYDLSHSLRKNTNELLWLACVSLTDQFVHERL---TDE 257
++ + YY G G ++Y L SL + E LWLA V LT ++ + T E
Sbjct: 288 YRNILTRYYARGESFGMSVSSMLYLLCESLGRADRESLWLAIVGLTSLYLSNNIDLETYE 347
Query: 258 RYQAG----VMELEQH--------------INSSGNLD--------------------AV 279
Y A V+ +E N++ N AV
Sbjct: 348 TYSAAYASEVIAIEPTSSNAPTEAWSLDLLTNANNNAQEQAARSATATATGAARAQNRAV 407
Query: 280 TSVTLKDGTKIRAPESARIAYDDEPRLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKL 339
SV K+ A + + E RL L + W+L +M ++Y+A KL W + G+ KL
Sbjct: 408 RSVISKNTKAEDADDRSIRIVGSELRLTLYRHWSLETAMYHTAYVAAKLGIWRERGLSKL 467
Query: 340 KLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSFLRLHGY-SSR 398
+ L+A+MGF+L +Q + +M L+++R + + E PEYGLT YR F R G+ ++
Sbjct: 468 RGLMAKMGFSLTAVRQNYTHMPLDLRRSLVRKLEAIAPEYGLTQLTYRGFERSLGFRTAP 527
Query: 399 VSAADVVYGVTALL 412
+ AADVV GV+ALL
Sbjct: 528 LGAADVVEGVSALL 541
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 17/136 (12%)
Query: 9 SFYTRLRESATASSD--SPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYPVSSFQEI 66
S Y+RLR +A A+ S +LI S+ DVDS+CA +I+ +L D + + PV ++ +
Sbjct: 31 SAYSRLRSAARAAGTGVSSVLIL-SSPDVDSVCATRILTSLLLQDDIAHRIVPVEGYRTL 89
Query: 67 ----------HKYAGPNLGSSSETQI-TILLINWGSHRDLKRVLNLGPKARVFVVDSHRP 115
H + SSS T + +++ IN G+ L N+ P + V+DSHRP
Sbjct: 90 LNTLSTVFAPHDNDNASSSSSSTTDVKSVVFINLGAVLSLPTTFNIPPSCTIHVIDSHRP 149
Query: 116 IHLHNL---SDGNDNV 128
+L NL S ND+V
Sbjct: 150 WNLENLFATSHANDSV 165
>sp|Q7MGU3|ACSA_VIBVY Acetyl-coenzyme A synthetase OS=Vibrio vulnificus (strain YJ016)
GN=acsA PE=3 SV=2
Length = 650
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 482 EDSADTKFLGYPQALTKFCYFLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLG 541
++ AD K L Y + T+ C F +ALKE+G R +VC + P + + C R+G
Sbjct: 100 DNPADDKTLTYNELYTEVCRF-SNALKEQGVRKGDVVCLYMPMVPEAAVAMLAC--TRIG 156
Query: 542 ALRGNAFG 549
A+ FG
Sbjct: 157 AVHTIVFG 164
>sp|Q8DCZ9|ACSA_VIBVU Acetyl-coenzyme A synthetase OS=Vibrio vulnificus (strain CMCP6)
GN=acsA PE=3 SV=1
Length = 650
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 482 EDSADTKFLGYPQALTKFCYFLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLG 541
++ D K L Y + T+ C F +ALKE+G R +VC + P + + C R+G
Sbjct: 100 DNPEDDKTLTYNELYTEVCRF-SNALKEQGVRKGDVVCLYMPMVPEAAVAMLAC--TRIG 156
Query: 542 ALRGNAFG 549
A+ FG
Sbjct: 157 AVHTIVFG 164
>sp|A3QD52|ACSA_SHELP Acetyl-coenzyme A synthetase OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=acsA PE=3 SV=1
Length = 650
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 482 EDSADTKFLGYPQALTKFCYFLMDALKEKGARMKPLVCACLAQEPNKVLIVGVCGKPRLG 541
+D+AD + L Y + T+ C F +AL+ +G R +V + P +++ C R+G
Sbjct: 100 DDAADQRTLTYGELHTEVCKF-ANALRSQGVRRGDVVTVYMPMVPEAAVVMLACA--RIG 156
Query: 542 ALRGNAFG 549
A+ FG
Sbjct: 157 AIHSVVFG 164
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1
Length = 534
Score = 32.7 bits (73), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 131 LYTPDDEQQADLAYDF-NVSALAHAIDLGIDD-EDSDSDEEDDSESEGEENEG--GSRKR 186
L P E DL+ +F N+ L ++ + DD DS +DE D SES E EG +R
Sbjct: 445 LGEPSPEYTPDLSVNFSNIRVLPDSMAVSSDDATDSTNDELDRSESSQTEGEGKQSNRPL 504
Query: 187 RRVDLERGEDPEKVFKRMKREY 208
+R+ E G K+ +R + Y
Sbjct: 505 KRMSNENGSGGVKIKRRNQAIY 526
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 217,026,323
Number of Sequences: 539616
Number of extensions: 9307086
Number of successful extensions: 59459
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 54708
Number of HSP's gapped (non-prelim): 3374
length of query: 591
length of database: 191,569,459
effective HSP length: 123
effective length of query: 468
effective length of database: 125,196,691
effective search space: 58592051388
effective search space used: 58592051388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)