Query 007744
Match_columns 591
No_of_seqs 125 out of 216
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 09:25:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxr_A Single-stranded DNA spe 92.4 0.24 8.2E-06 56.2 8.2 104 6-117 57-165 (666)
2 1wpn_A Manganese-dependent ino 91.0 0.86 3E-05 42.8 9.2 88 25-115 3-100 (188)
3 3dma_A Exopolyphosphatase-rela 90.9 0.5 1.7E-05 49.2 8.2 48 4-58 8-57 (343)
4 3dev_A SH1221; alpha-beta prot 88.4 1.2 4.1E-05 45.9 8.6 48 7-61 5-54 (320)
5 2qb7_A Exopolyphosphatase; A/B 78.5 3.3 0.00011 43.7 7.0 44 7-51 8-56 (397)
6 2haw_A Manganese-dependent ino 77.3 6.1 0.00021 40.1 8.3 33 26-58 4-37 (309)
7 2eb0_A Manganese-dependent ino 67.9 8.4 0.00029 39.0 6.7 75 33-115 10-91 (307)
8 1k20_A Manganese-dependent ino 60.1 14 0.00049 37.4 6.7 45 218-262 119-167 (310)
9 2cly_C ATP synthase coupling f 38.4 14 0.00046 30.2 1.8 30 360-389 32-62 (77)
10 2wul_A Glutaredoxin related pr 29.8 45 0.0015 29.1 3.9 73 24-99 20-97 (118)
11 2in3_A Hypothetical protein; D 25.1 2E+02 0.0069 26.2 8.0 95 310-413 110-210 (216)
12 2ct6_A SH3 domain-binding glut 23.5 2.3E+02 0.0078 23.6 7.3 74 23-99 7-93 (111)
13 3epy_A Acyl-COA-binding domain 23.3 44 0.0015 27.7 2.6 62 309-381 28-89 (89)
14 2p57_A GTPase-activating prote 21.2 57 0.002 29.6 3.0 47 334-380 97-144 (144)
No 1
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=92.43 E-value=0.24 Score=56.18 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=55.1
Q ss_pred hHHHHHHHHHhhhccCCCCCEEEEecCCChhHHHHHHHHHHhHhcCCcceeEEe----cCChHHHHHhhccccCCCCCCc
Q 007744 6 KLDSFYTRLRESATASSDSPLLIFPSTSDVDSLCALKIILHVLESDSVRYACYP----VSSFQEIHKYAGPNLGSSSETQ 81 (591)
Q Consensus 6 ~~~~~Y~~I~~~~~~~~~~~VlI~Vs~~DvDAlCA~rIL~~Llk~D~I~y~l~P----V~gy~eL~~~~~e~~~~~~~~~ 81 (591)
....+.+.|.+.-.+ +.+|+|+- -.|+|++||+-+|...|+.-+....++- -.||.=.....++. .+..
T Consensus 57 dm~~Av~~i~~aI~~--~ekI~I~G-H~D~DGi~Saa~L~~~L~~lG~~v~~~ip~r~~egygl~~~~I~~~----~~~~ 129 (666)
T 2zxr_A 57 GLREAAALLEEALRQ--GKRIRVHG-DYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEH----LEAS 129 (666)
T ss_dssp THHHHHHHHHHHHHT--TCEEEEEC-CSSHHHHHHHHHHHHHHHHTTCEEEECCC------------------------C
T ss_pred hHHHHHHHHHHHHHc--CCeEEEEe-ccCCchHHHHHHHHHHHHHcCCcEEEecCCCCCccccCCHHHHHhh----ccCC
Confidence 345566677654433 46899997 5899999999999999988776544331 13444333333433 1346
Q ss_pred cEEEEEecccccchHHhhCC-CCCcEEEEEcCCCCCc
Q 007744 82 ITILLINWGSHRDLKRVLNL-GPKARVFVVDSHRPIH 117 (591)
Q Consensus 82 ~~vilINcGg~vDl~~~l~~-~~~~~iyViDSHRP~~ 117 (591)
..+|.+-||-. +...+-.. ..++.+.|+|-|+|=.
T Consensus 130 ~LIItVD~G~~-s~~~i~~a~~~g~~VIViDHH~~~~ 165 (666)
T 2zxr_A 130 DLFLTVDCGIT-NHAELRELLENGVEVIVTDHHTPGK 165 (666)
T ss_dssp CEEEESCCC---------------CEEEEECCCC---
T ss_pred CEEEEEcCCch-hhhhHHHHHhCCCCEEEECCcCCCC
Confidence 78999999854 22222111 2467899999999854
No 2
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=91.02 E-value=0.86 Score=42.77 Aligned_cols=88 Identities=14% Similarity=0.188 Sum_probs=46.7
Q ss_pred CEEEEecC--CChhHHHHHHHHHHhHhcCCcceeEEecCCh-HHHHHhhcc-------ccCCCCCCccEEEEEecccccc
Q 007744 25 PLLIFPST--SDVDSLCALKIILHVLESDSVRYACYPVSSF-QEIHKYAGP-------NLGSSSETQITILLINWGSHRD 94 (591)
Q Consensus 25 ~VlI~Vs~--~DvDAlCA~rIL~~Llk~D~I~y~l~PV~gy-~eL~~~~~e-------~~~~~~~~~~~vilINcGg~vD 94 (591)
+++|+. - +|.|||+++-.|..+|+.-+....++-.... .+++..... .+.....+...+|++-||..--
T Consensus 3 ~i~I~g-H~~pD~DaigSa~al~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vi~VD~~~~~r 81 (188)
T 1wpn_A 3 KILIFG-HQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQESPRLVETAANEVNGVILVDHNERQQ 81 (188)
T ss_dssp CEEEEC-CSSCCHHHHHHHHHHHHHHHHTTCCEEEEESSCCCHHHHHHHHHTTCCCCEECSCSTTTCSEEEEESCCCGGG
T ss_pred CEEEEc-CCCCCHHHHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCCchhhhhhhccCCCeEEEEeCCCccc
Confidence 466664 4 7999999999999998876655444322222 233332221 1100001224677777775321
Q ss_pred hHHhhCCCCCcEEEEEcCCCC
Q 007744 95 LKRVLNLGPKARVFVVDSHRP 115 (591)
Q Consensus 95 l~~~l~~~~~~~iyViDSHRP 115 (591)
+...+ .....+.|||-|++
T Consensus 82 ~~~~~--~~~~~vivIDHH~~ 100 (188)
T 1wpn_A 82 SIKDI--EEVQVLEVIDHHRI 100 (188)
T ss_dssp SCTTG--GGSEEEEEEECSCC
T ss_pred chhhh--ccCCeEEEECCCCC
Confidence 11112 12345667777764
No 3
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=90.93 E-value=0.5 Score=49.19 Aligned_cols=48 Identities=19% Similarity=0.266 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHhhhccCCCCCEEEE--ecCCChhHHHHHHHHHHhHhcCCcceeEE
Q 007744 4 EKKLDSFYTRLRESATASSDSPLLIF--PSTSDVDSLCALKIILHVLESDSVRYACY 58 (591)
Q Consensus 4 ~~~~~~~Y~~I~~~~~~~~~~~VlI~--Vs~~DvDAlCA~rIL~~Llk~D~I~y~l~ 58 (591)
..++..+.+.|++ ..+|+|+ +. +|.|||+++-.|..+|+.-+....++
T Consensus 8 ~~~~~~l~~~i~~------~~~i~I~~H~~-pD~DaiGS~~~l~~~l~~~g~~~~~~ 57 (343)
T 3dma_A 8 QAHIDHFTKWFER------ADKIVIVSHVS-PDGDAIGSSLGLYHFLDSQDKIVNVI 57 (343)
T ss_dssp HHHHHHHHHHHHH------CSEEEEEECSS-CCHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHhc------CCeEEEEecCC-CChHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4455666666664 3578998 54 69999999999999999887766554
No 4
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=88.40 E-value=1.2 Score=45.87 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhhccCCCCCEEEE--ecCCChhHHHHHHHHHHhHhcCCcceeEEecC
Q 007744 7 LDSFYTRLRESATASSDSPLLIF--PSTSDVDSLCALKIILHVLESDSVRYACYPVS 61 (591)
Q Consensus 7 ~~~~Y~~I~~~~~~~~~~~VlI~--Vs~~DvDAlCA~rIL~~Llk~D~I~y~l~PV~ 61 (591)
+..+.+.|++ ..+|+|+ ++ +|.|||+++--|..+|+.-+..-+++.+.
T Consensus 5 ~~~i~~~i~~------~~~i~I~~H~~-PD~DaigSalal~~~l~~~~~~k~v~~~~ 54 (320)
T 3dev_A 5 FNEIMQRVKE------AETIIIHRHVR-PDPDAYGSQLGLKLYLERKFPEKNIYATG 54 (320)
T ss_dssp HHHHHHHHHT------CSEEEEECBSS-CCHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred HHHHHHHHhc------CCeEEEEeCCC-CCchHHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 4555566653 4579999 75 89999999999999888764444554443
No 5
>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A*
Probab=78.45 E-value=3.3 Score=43.69 Aligned_cols=44 Identities=18% Similarity=0.174 Sum_probs=28.2
Q ss_pred HHHHHHHHHhhhcc---CCCCCEEEE--ecCCChhHHHHHHHHHHhHhcC
Q 007744 7 LDSFYTRLRESATA---SSDSPLLIF--PSTSDVDSLCALKIILHVLESD 51 (591)
Q Consensus 7 ~~~~Y~~I~~~~~~---~~~~~VlI~--Vs~~DvDAlCA~rIL~~Llk~D 51 (591)
...|..+.|+.-.+ .....++|+ ++ +|.||||++-.|..+++.-
T Consensus 8 l~~fl~~~~~~l~~~~~~~~~~iiV~gH~~-pD~DaigSalala~~l~~~ 56 (397)
T 2qb7_A 8 VPEFLAHLKSLPISKIASNDVLTICVGNES-ADMDSIASAITYSYCQYIY 56 (397)
T ss_dssp HHHHHHHHHHSCHHHHSBTTEEEEEECCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCeEEEeCCCC-CCHHHHHHHHHHHHHHHhc
Confidence 56666666654332 122334444 24 8999999999998888653
No 6
>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A*
Probab=77.29 E-value=6.1 Score=40.06 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=24.1
Q ss_pred EEEEec-CCChhHHHHHHHHHHhHhcCCcceeEE
Q 007744 26 LLIFPS-TSDVDSLCALKIILHVLESDSVRYACY 58 (591)
Q Consensus 26 VlI~Vs-~~DvDAlCA~rIL~~Llk~D~I~y~l~ 58 (591)
++|+.. .+|.||||++-.|..++++-+....++
T Consensus 4 i~I~gH~~pD~DaigSalal~~~l~~~g~~~~~~ 37 (309)
T 2haw_A 4 ILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPV 37 (309)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHcCCCeEEE
Confidence 555532 279999999999999988766554444
No 7
>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii}
Probab=67.88 E-value=8.4 Score=38.96 Aligned_cols=75 Identities=16% Similarity=0.173 Sum_probs=39.3
Q ss_pred CChhHHHHHHHHHHhHhcCCcceeEEecCChHHHHHhhcc-------ccCCCCCCccEEEEEecccccchHHhhCCCCCc
Q 007744 33 SDVDSLCALKIILHVLESDSVRYACYPVSSFQEIHKYAGP-------NLGSSSETQITILLINWGSHRDLKRVLNLGPKA 105 (591)
Q Consensus 33 ~DvDAlCA~rIL~~Llk~D~I~y~l~PV~gy~eL~~~~~e-------~~~~~~~~~~~vilINcGg~vDl~~~l~~~~~~ 105 (591)
+|.||||++--|..++ +-.++..-++. .+++..... .+ .......+|++.|+..--+.+.+ +...
T Consensus 10 pD~DaigSalal~~~l--~~~~~~~~~~~--~~~~~ll~~~~~~~~~~~--~~~~~~~vilVD~~~~~r~~~~~--~~~~ 81 (307)
T 2eb0_A 10 PDTDSIASAIVLAYFL--DCYPARLGDIN--PETEFVLRKFGVMEPELI--ESAKGKEIILVDHSEKSQSFDDL--EEGK 81 (307)
T ss_dssp CCHHHHHHHHHHHHHH--TSEEEESSCCC--HHHHHHHHHHTCCCCEEC--CCCTTCEEEEESCCCGGGSCTTG--GGSE
T ss_pred CChHHHHHHHHHHHHh--CCeEEEcCCCC--HHHHHHHHHcCCCchhhh--hhccCCeEEEEeCCCcccchhhc--ccCC
Confidence 8999999999999998 33333222222 343333221 21 11123467777776543222222 1223
Q ss_pred EEEEEcCCCC
Q 007744 106 RVFVVDSHRP 115 (591)
Q Consensus 106 ~iyViDSHRP 115 (591)
.+.|||-|+.
T Consensus 82 ~~~iIDHH~~ 91 (307)
T 2eb0_A 82 LIAIIDHHKV 91 (307)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEcCCCC
Confidence 5667777765
No 8
>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A
Probab=60.05 E-value=14 Score=37.38 Aligned_cols=45 Identities=9% Similarity=0.034 Sum_probs=27.3
Q ss_pred chHHHHHHHHHHhccc----CcchhHHHHHhhchHHhhhccchHHHHHH
Q 007744 218 PSGCLMYDLSHSLRKN----TNELLWLACVSLTDQFVHERLTDERYQAG 262 (591)
Q Consensus 218 s~s~~~y~La~~l~r~----~~d~LW~AIvGlT~q~i~~rI~~~~Y~~~ 262 (591)
|+|.++|++...++-. -...|-.||+.=|-.|.+...++..+...
T Consensus 119 St~tiv~~~~~~~~~~i~~~~A~~L~~gI~~DT~~F~~~~tt~~d~~aa 167 (310)
T 1k20_A 119 SASSIVYRMFKEHSVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIA 167 (310)
T ss_dssp CHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 5666777777665432 23357777777676666655666555443
No 9
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=38.42 E-value=14 Score=30.20 Aligned_cols=30 Identities=20% Similarity=0.428 Sum_probs=25.9
Q ss_pred CcHHHHHHHHHHHHhhccccCCCCcc-cceE
Q 007744 360 MNLEVKRKMKDEFERFLPEYGLTDFY-YRSF 389 (591)
Q Consensus 360 Md~~~k~~L~~~l~~~a~~ygL~dl~-~~sF 389 (591)
-.+++.++|.+.|++.+..||..|+. ||.|
T Consensus 32 ~~Pe~~kel~~el~kL~~~YGggDm~kFP~F 62 (77)
T 2cly_C 32 AGPEYQQDLDRELFKLKQMYGKADMNTFPNF 62 (77)
T ss_dssp CCTHHHHHHHHHHHHHHHHHCSSCTTSCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHCcchHhhCCCC
Confidence 36789999999999999999998775 7775
No 10
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=29.82 E-value=45 Score=29.11 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=49.4
Q ss_pred CCEEEEec-CCChhHHHHHHHHHHhHhcCCc-ceeEEecCChHHHHHhhccccCCCCCCccEEEEEe---cccccchHHh
Q 007744 24 SPLLIFPS-TSDVDSLCALKIILHVLESDSV-RYACYPVSSFQEIHKYAGPNLGSSSETQITILLIN---WGSHRDLKRV 98 (591)
Q Consensus 24 ~~VlI~Vs-~~DvDAlCA~rIL~~Llk~D~I-~y~l~PV~gy~eL~~~~~e~~~~~~~~~~~vilIN---cGg~vDl~~~ 98 (591)
.+|+||.- +++.---+-|+-...||+.-+| .|..+-|..-.+++....+.. ...-+-. |+|| .||.-||.++
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~s--g~~TvPq-IFI~g~~IGG~Ddl~~l 96 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYS--NWPTIPQ-VYLNGEFVGGCDILLQM 96 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHH--TCCSSCE-EEETTEEEECHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhc--cCCCCCe-EeECCEEECCHHHHHHH
Confidence 58999953 1222223567777788888888 599999999999988888873 1111211 4555 4888888776
Q ss_pred h
Q 007744 99 L 99 (591)
Q Consensus 99 l 99 (591)
.
T Consensus 97 ~ 97 (118)
T 2wul_A 97 H 97 (118)
T ss_dssp H
T ss_pred H
Confidence 4
No 11
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=25.08 E-value=2e+02 Score=26.21 Aligned_cols=95 Identities=14% Similarity=0.241 Sum_probs=57.6
Q ss_pred hcchhhhhhhcCccchhcccccccchHHHHHHHHHHhCCchhhhhcccccCcHHHHHHHHHHHHhhccccCCCCcccceE
Q 007744 310 QEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGLTDFYYRSF 389 (591)
Q Consensus 310 RHWsLydSm~~S~yvaskL~lW~~~G~krL~~lLA~MGisL~~~kQ~y~~Md~~~k~~L~~~l~~~a~~ygL~dl~~~sF 389 (591)
+.|.+.++++..-|...+ .+ .-...|.++.++.|++..+.++.+. +.+.+..+.+..+ .+.++|... .|+|
T Consensus 110 ~~~~~~~~lf~a~~~~~~-~~---~~~~~l~~~a~~~Gld~~~~~~~~~--~~~~~~~v~~~~~-~a~~~gv~g--~Pt~ 180 (216)
T 2in3_A 110 KVFPFFAAIQRAFYVGQE-DV---AQLAILKKLAVDLGIPESRFTPVFQ--SDEAKQRTLAGFQ-RVAQWGISG--FPAL 180 (216)
T ss_dssp GHHHHHHHHHHHHHTTCC-CT---TSHHHHHHHHHHTTCCHHHHHHHHH--SHHHHHHHHHHHH-HHHHTTCCS--SSEE
T ss_pred hHHHHHHHHHHHHHhcCC-CC---CCHHHHHHHHHHcCCCHHHHHHHhc--chHHHHHHHHHHH-HHHHcCCcc--cceE
Confidence 357777777743222111 11 2367899999999999888877554 4667777777654 467788765 3666
Q ss_pred EEE----e--ccCcccchhhHHHHHHhhhh
Q 007744 390 LRL----H--GYSSRVSAADVVYGVTALLE 413 (591)
Q Consensus 390 ~r~----~--Gy~~~lSA~D~v~al~ALLe 413 (591)
+.. + -+.+..+..++...|..+++
T Consensus 181 ~i~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 181 VVESGTDRYLITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEeccCCCCHHHHHHHHHHHHH
Confidence 541 1 12233445556666665554
No 12
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.49 E-value=2.3e+02 Score=23.55 Aligned_cols=74 Identities=11% Similarity=0.176 Sum_probs=45.2
Q ss_pred CCCEEEEecCCChhHHHH----HHHHHHhHhcCCcceeEEecCChHHHHHhhccccCC-----CCC-CccEEEEEe---c
Q 007744 23 DSPLLIFPSTSDVDSLCA----LKIILHVLESDSVRYACYPVSSFQEIHKYAGPNLGS-----SSE-TQITILLIN---W 89 (591)
Q Consensus 23 ~~~VlI~Vs~~DvDAlCA----~rIL~~Llk~D~I~y~l~PV~gy~eL~~~~~e~~~~-----~~~-~~~~vilIN---c 89 (591)
..+|.||.. ..|- .|. |.-...+|+.-.|.|..+-|..-.++.....+.... .+. .+ =+|+|| +
T Consensus 7 ~m~V~vy~~-~~C~-~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tv-P~vfi~g~~i 83 (111)
T 2ct6_A 7 GMVIRVFIA-SSSG-FVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLP-PQIFNGDRYC 83 (111)
T ss_dssp CCCEEEEEC-SSCS-CHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCS-CEEEETTEEE
T ss_pred ccEEEEEEc-CCCC-CcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCC-CEEEECCEEE
Confidence 357999974 4432 232 224777888899999999999876766655554200 011 11 156776 6
Q ss_pred ccccchHHhh
Q 007744 90 GSHRDLKRVL 99 (591)
Q Consensus 90 Gg~vDl~~~l 99 (591)
||.-++.++.
T Consensus 84 GG~d~l~~l~ 93 (111)
T 2ct6_A 84 GDYDSFFESK 93 (111)
T ss_dssp EEHHHHHHHH
T ss_pred eCHHHHHHHH
Confidence 7777766554
No 13
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=23.35 E-value=44 Score=27.74 Aligned_cols=62 Identities=11% Similarity=0.229 Sum_probs=47.2
Q ss_pred hhcchhhhhhhcCccchhcccccccchHHHHHHHHHHhCCchhhhhcccccCcHHHHHHHHHHHHhhccccCC
Q 007744 309 LQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALVDCQQKFQYMNLEVKRKMKDEFERFLPEYGL 381 (591)
Q Consensus 309 lRHWsLydSm~~S~yvaskL~lW~~~G~krL~~lLA~MGisL~~~kQ~y~~Md~~~k~~L~~~l~~~a~~ygL 381 (591)
|+=+.||-=-.+-+.-..+=+.|.-.|+.|-+-.-+.=|+|-.+|++.|. +.+++..|+||+
T Consensus 28 L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi-----------~~v~~l~~ky~~ 89 (89)
T 3epy_A 28 KELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI-----------SKAKELIEKYGI 89 (89)
T ss_dssp HHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH-----------HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH-----------HHHHHHhhhhcC
Confidence 34457777666666666677888889999999888888999999998884 456666677764
No 14
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=21.22 E-value=57 Score=29.64 Aligned_cols=47 Identities=15% Similarity=0.191 Sum_probs=39.0
Q ss_pred chHHHHHHHHHHhCCchhhhhcccccC-cHHHHHHHHHHHHhhccccC
Q 007744 334 NGMKKLKLLLARMGFALVDCQQKFQYM-NLEVKRKMKDEFERFLPEYG 380 (591)
Q Consensus 334 ~G~krL~~lLA~MGisL~~~kQ~y~~M-d~~~k~~L~~~l~~~a~~yg 380 (591)
.|-++.+.++.+-|++....+++|..- -..+|++|....++.+.+||
T Consensus 97 ~GN~~an~~~e~~g~~~~~~~~KY~s~aA~~Yr~~l~~~~~~~~~~~~ 144 (144)
T 2p57_A 97 GGNANATAFFRQHGCTANDANTKYNSRAAQMYREKIRQLGSAALARHG 144 (144)
T ss_dssp CCHHHHHHHHHHTTCCCCSHHHHHTSHHHHHHHHHHHHHHHHTCC---
T ss_pred hCHHHHHHHHHHcCCCCCchhhccCcHHHHHHHHHHHHHHHHHHHHhC
Confidence 388889999999999998999999987 46788899999999988886
Done!