Query 007754
Match_columns 591
No_of_seqs 218 out of 1370
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 09:39:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 6E-207 2E-211 1663.4 47.4 540 50-591 1-541 (555)
2 1o0s_A NAD-ME, NAD-dependent m 100.0 3E-206 1E-210 1666.4 44.7 544 46-591 33-578 (605)
3 1pj3_A NAD-dependent malic enz 100.0 5E-206 2E-210 1660.5 46.1 541 50-591 3-546 (564)
4 3nv9_A Malic enzyme; rossmann 100.0 4E-121 1E-125 976.6 30.3 383 128-582 55-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 6E-113 2E-117 903.9 16.7 362 121-563 23-391 (398)
6 1vl6_A Malate oxidoreductase; 100.0 2E-107 7E-112 860.3 22.0 354 121-559 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 4E-86 1.4E-90 709.0 25.6 385 121-587 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 2.9E-08 9.8E-13 106.8 15.5 168 253-459 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 1.9E-08 6.4E-13 108.3 11.3 130 298-461 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 2.3E-06 7.9E-11 90.6 8.3 219 166-449 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 9.1E-05 3.1E-09 80.3 12.3 128 298-459 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 0.0001 3.4E-09 80.6 10.2 132 298-462 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.1 0.0021 7.2E-08 67.2 10.6 224 167-448 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 96.9 0.00094 3.2E-08 71.4 6.4 111 328-455 187-322 (405)
15 3k92_A NAD-GDH, NAD-specific g 96.6 0.036 1.2E-06 59.7 15.7 178 253-449 126-329 (424)
16 3p2y_A Alanine dehydrogenase/p 96.5 0.0034 1.2E-07 66.6 7.1 104 329-449 182-305 (381)
17 4fcc_A Glutamate dehydrogenase 96.4 0.16 5.6E-06 55.0 19.4 183 252-449 140-354 (450)
18 3aoe_E Glutamate dehydrogenase 96.4 0.027 9.3E-07 60.5 13.3 186 253-461 123-332 (419)
19 3d4o_A Dipicolinate synthase s 96.3 0.024 8.1E-07 56.8 11.8 121 310-459 134-255 (293)
20 1a4i_A Methylenetetrahydrofola 95.9 0.018 6.1E-07 59.5 8.3 96 309-448 143-239 (301)
21 3r3j_A Glutamate dehydrogenase 95.9 0.43 1.5E-05 51.8 19.2 190 253-461 145-368 (456)
22 3jyo_A Quinate/shikimate dehyd 95.7 0.02 7E-07 57.8 7.8 88 315-422 111-205 (283)
23 3l07_A Bifunctional protein fo 95.7 0.027 9.2E-07 57.7 8.6 83 311-431 141-224 (285)
24 3aog_A Glutamate dehydrogenase 95.5 0.19 6.5E-06 54.3 14.9 179 253-449 140-344 (440)
25 2yfq_A Padgh, NAD-GDH, NAD-spe 95.5 0.23 7.7E-06 53.4 15.2 179 253-449 116-326 (421)
26 3tri_A Pyrroline-5-carboxylate 95.4 0.074 2.5E-06 53.0 10.5 98 331-450 3-102 (280)
27 3p2o_A Bifunctional protein fo 95.3 0.044 1.5E-06 56.2 8.6 92 310-445 139-231 (285)
28 3ngx_A Bifunctional protein fo 95.2 0.042 1.4E-06 56.1 8.2 82 310-431 131-213 (276)
29 1b0a_A Protein (fold bifunctio 95.1 0.039 1.3E-06 56.7 7.6 96 309-448 137-233 (288)
30 4a5o_A Bifunctional protein fo 95.0 0.055 1.9E-06 55.4 8.4 95 311-449 141-237 (286)
31 2bma_A Glutamate dehydrogenase 94.9 0.36 1.2E-05 52.6 14.8 179 254-449 159-372 (470)
32 1edz_A 5,10-methylenetetrahydr 94.9 0.041 1.4E-06 57.2 7.2 113 313-449 150-278 (320)
33 3don_A Shikimate dehydrogenase 94.9 0.03 1E-06 56.7 5.9 86 315-422 101-186 (277)
34 3oj0_A Glutr, glutamyl-tRNA re 94.7 0.016 5.3E-07 51.6 3.0 71 331-422 21-91 (144)
35 4a26_A Putative C-1-tetrahydro 94.7 0.062 2.1E-06 55.4 7.8 95 308-446 142-239 (300)
36 1v9l_A Glutamate dehydrogenase 94.7 0.29 9.9E-06 52.6 13.2 178 254-449 116-325 (421)
37 4e12_A Diketoreductase; oxidor 94.7 0.061 2.1E-06 53.4 7.5 97 332-451 5-124 (283)
38 1c1d_A L-phenylalanine dehydro 94.6 0.16 5.4E-06 53.4 10.7 167 255-453 92-269 (355)
39 1v8b_A Adenosylhomocysteinase; 94.6 0.16 5.4E-06 55.4 11.1 123 306-461 235-357 (479)
40 1gpj_A Glutamyl-tRNA reductase 94.4 0.25 8.4E-06 52.0 11.7 102 328-449 164-269 (404)
41 2egg_A AROE, shikimate 5-dehyd 94.4 0.042 1.5E-06 55.6 5.6 87 316-422 125-215 (297)
42 1leh_A Leucine dehydrogenase; 94.2 0.079 2.7E-06 55.7 7.5 159 259-449 93-264 (364)
43 2tmg_A Protein (glutamate dehy 94.2 1 3.5E-05 48.2 16.2 178 254-449 115-319 (415)
44 2rir_A Dipicolinate synthase, 94.0 0.25 8.5E-06 49.5 10.3 110 322-459 148-257 (300)
45 1bgv_A Glutamate dehydrogenase 93.8 1.3 4.5E-05 47.9 16.1 179 254-449 136-350 (449)
46 2c2x_A Methylenetetrahydrofola 93.7 0.14 4.7E-06 52.4 7.8 98 309-448 136-234 (281)
47 1hyh_A L-hicdh, L-2-hydroxyiso 93.7 0.15 5.1E-06 51.3 8.1 102 332-450 2-126 (309)
48 3u62_A Shikimate dehydrogenase 93.6 0.086 2.9E-06 52.4 6.1 124 262-421 42-176 (253)
49 2dpo_A L-gulonate 3-dehydrogen 93.6 0.16 5.5E-06 52.1 8.3 195 331-580 6-226 (319)
50 2o4c_A Erythronate-4-phosphate 93.0 1.1 3.8E-05 47.3 13.7 184 299-529 81-280 (380)
51 3fbt_A Chorismate mutase and s 93.0 0.15 5E-06 51.8 6.7 49 316-375 107-155 (282)
52 1pjc_A Protein (L-alanine dehy 92.9 0.21 7E-06 51.7 7.9 96 329-448 165-269 (361)
53 1mld_A Malate dehydrogenase; o 92.9 0.29 9.8E-06 49.9 8.8 101 333-449 2-120 (314)
54 3tnl_A Shikimate dehydrogenase 92.9 0.17 5.8E-06 52.1 7.1 50 315-375 138-187 (315)
55 3o8q_A Shikimate 5-dehydrogena 92.9 0.15 5.2E-06 51.5 6.6 50 315-375 110-159 (281)
56 2ewd_A Lactate dehydrogenase,; 92.9 0.15 5.1E-06 51.6 6.6 98 332-450 5-125 (317)
57 3t4e_A Quinate/shikimate dehyd 92.8 0.16 5.6E-06 52.2 6.9 49 316-375 133-181 (312)
58 3d64_A Adenosylhomocysteinase; 92.8 0.37 1.3E-05 52.7 9.9 109 310-449 259-367 (494)
59 3u95_A Glycoside hydrolase, fa 92.7 0.18 6.2E-06 54.6 7.4 45 427-474 140-184 (477)
60 2hk9_A Shikimate dehydrogenase 92.7 0.25 8.7E-06 49.0 7.9 84 316-422 114-197 (275)
61 1pzg_A LDH, lactate dehydrogen 92.7 0.17 6E-06 51.9 6.9 105 332-450 10-136 (331)
62 3pwz_A Shikimate dehydrogenase 92.4 0.17 5.7E-06 51.0 6.2 98 262-375 44-153 (272)
63 3tum_A Shikimate dehydrogenase 92.3 0.23 7.8E-06 50.0 6.9 48 316-374 110-157 (269)
64 3mw9_A GDH 1, glutamate dehydr 92.2 0.64 2.2E-05 51.1 10.9 179 253-449 136-352 (501)
65 3dtt_A NADP oxidoreductase; st 92.2 0.27 9.1E-06 47.7 7.2 109 325-449 13-127 (245)
66 2ekl_A D-3-phosphoglycerate de 92.0 1.5 5.3E-05 44.5 12.8 121 298-447 90-233 (313)
67 3ce6_A Adenosylhomocysteinase; 91.7 1.2 4.2E-05 48.5 12.5 108 323-461 266-374 (494)
68 2eez_A Alanine dehydrogenase; 91.6 0.55 1.9E-05 48.6 9.2 97 328-448 163-268 (369)
69 1ldn_A L-lactate dehydrogenase 91.6 0.24 8.1E-06 50.4 6.3 105 332-449 7-126 (316)
70 1gtm_A Glutamate dehydrogenase 91.6 1.4 4.7E-05 47.2 12.4 114 254-379 115-250 (419)
71 2v6b_A L-LDH, L-lactate dehydr 91.5 0.091 3.1E-06 53.2 3.1 104 333-450 2-120 (304)
72 3fef_A Putative glucosidase LP 91.4 0.24 8.3E-06 53.5 6.4 106 329-449 3-149 (450)
73 2i6t_A Ubiquitin-conjugating e 91.2 0.39 1.3E-05 48.9 7.4 101 332-450 15-129 (303)
74 2d5c_A AROE, shikimate 5-dehyd 91.2 0.34 1.2E-05 47.4 6.7 81 316-422 102-182 (263)
75 2hjr_A Malate dehydrogenase; m 91.1 0.18 6.2E-06 51.7 4.9 105 332-450 15-135 (328)
76 1a5z_A L-lactate dehydrogenase 91.0 0.41 1.4E-05 48.6 7.3 99 333-451 2-121 (319)
77 1p77_A Shikimate 5-dehydrogena 91.0 0.28 9.5E-06 48.7 5.9 49 315-375 103-151 (272)
78 3oet_A Erythronate-4-phosphate 90.9 1.3 4.4E-05 46.9 11.2 120 298-449 83-213 (381)
79 1x7d_A Ornithine cyclodeaminas 90.8 0.37 1.3E-05 50.0 6.9 114 316-457 116-238 (350)
80 1nyt_A Shikimate 5-dehydrogena 90.8 0.4 1.4E-05 47.4 6.9 49 315-375 103-151 (271)
81 1b8p_A Protein (malate dehydro 90.4 0.29 9.9E-06 50.0 5.6 111 332-449 6-136 (329)
82 1zud_1 Adenylyltransferase THI 90.4 0.29 9.8E-06 48.3 5.4 37 328-375 25-61 (251)
83 1t2d_A LDH-P, L-lactate dehydr 90.1 0.28 9.5E-06 50.3 5.2 102 332-451 5-131 (322)
84 1o6z_A MDH, malate dehydrogena 90.1 0.21 7.1E-06 50.6 4.2 103 333-449 2-122 (303)
85 2gcg_A Glyoxylate reductase/hy 90.0 2.5 8.6E-05 43.1 12.2 140 279-447 80-247 (330)
86 2dbq_A Glyoxylate reductase; D 89.9 4 0.00014 41.8 13.6 121 298-447 89-241 (334)
87 2zqz_A L-LDH, L-lactate dehydr 89.8 0.26 8.9E-06 50.7 4.7 106 331-449 9-128 (326)
88 1lld_A L-lactate dehydrogenase 89.6 0.45 1.5E-05 47.4 6.1 102 332-450 8-128 (319)
89 1lu9_A Methylene tetrahydromet 89.5 1.4 4.7E-05 43.6 9.5 81 281-375 64-152 (287)
90 3h5n_A MCCB protein; ubiquitin 89.5 0.94 3.2E-05 47.0 8.6 38 327-375 114-151 (353)
91 1ez4_A Lactate dehydrogenase; 89.4 0.32 1.1E-05 49.8 5.0 105 332-449 6-124 (318)
92 1txg_A Glycerol-3-phosphate de 89.4 0.89 3E-05 45.1 8.1 94 333-449 2-107 (335)
93 3d1l_A Putative NADP oxidoredu 89.3 0.33 1.1E-05 47.0 4.8 98 328-449 7-105 (266)
94 2g1u_A Hypothetical protein TM 89.3 0.64 2.2E-05 41.5 6.4 37 327-375 15-51 (155)
95 1guz_A Malate dehydrogenase; o 89.3 0.76 2.6E-05 46.4 7.7 104 333-449 2-121 (310)
96 3d0o_A L-LDH 1, L-lactate dehy 89.3 0.39 1.3E-05 48.9 5.5 107 330-449 5-126 (317)
97 3rui_A Ubiquitin-like modifier 89.1 0.33 1.1E-05 50.8 4.9 37 328-375 31-67 (340)
98 3hdj_A Probable ornithine cycl 89.1 1.5 5.2E-05 44.8 9.7 101 330-459 120-227 (313)
99 1y6j_A L-lactate dehydrogenase 88.9 0.44 1.5E-05 48.6 5.6 98 332-449 8-126 (318)
100 1obb_A Maltase, alpha-glucosid 88.9 0.29 1E-05 53.3 4.5 127 331-474 3-177 (480)
101 1omo_A Alanine dehydrogenase; 88.8 1.3 4.6E-05 45.1 9.1 112 316-457 112-229 (322)
102 1z82_A Glycerol-3-phosphate de 88.7 0.49 1.7E-05 47.7 5.8 95 331-451 14-116 (335)
103 2i99_A MU-crystallin homolog; 88.4 1.3 4.3E-05 44.9 8.6 113 316-456 122-237 (312)
104 3k5p_A D-3-phosphoglycerate de 88.3 4.7 0.00016 43.1 13.2 193 297-528 101-322 (416)
105 2rcy_A Pyrroline carboxylate r 88.3 2.4 8.2E-05 40.6 10.1 92 331-450 4-95 (262)
106 2zyd_A 6-phosphogluconate dehy 88.3 0.91 3.1E-05 49.0 7.8 102 328-449 12-116 (480)
107 4g2n_A D-isomer specific 2-hyd 88.1 3.2 0.00011 43.1 11.5 192 298-528 116-336 (345)
108 1wwk_A Phosphoglycerate dehydr 87.8 3 0.0001 42.3 10.8 109 310-447 103-233 (307)
109 3h8v_A Ubiquitin-like modifier 87.7 0.58 2E-05 47.8 5.6 38 327-375 32-69 (292)
110 3vku_A L-LDH, L-lactate dehydr 87.7 0.52 1.8E-05 48.7 5.3 107 330-449 8-128 (326)
111 4e21_A 6-phosphogluconate dehy 87.6 1.8 6E-05 45.1 9.2 95 329-448 20-117 (358)
112 3jtm_A Formate dehydrogenase, 87.6 3.8 0.00013 42.6 11.8 174 298-502 108-309 (351)
113 2hmt_A YUAA protein; RCK, KTN, 87.6 0.36 1.2E-05 41.3 3.4 103 329-449 4-108 (144)
114 2vhw_A Alanine dehydrogenase; 87.5 0.61 2.1E-05 48.6 5.6 96 328-447 165-269 (377)
115 1s6y_A 6-phospho-beta-glucosid 87.4 0.33 1.1E-05 52.3 3.6 127 332-472 8-175 (450)
116 3ba1_A HPPR, hydroxyphenylpyru 87.3 3.2 0.00011 42.8 10.9 108 310-449 124-254 (333)
117 3gvi_A Malate dehydrogenase; N 87.0 0.84 2.9E-05 47.0 6.3 106 329-449 5-127 (324)
118 1xdw_A NAD+-dependent (R)-2-hy 86.9 4.3 0.00015 41.6 11.5 137 279-447 73-235 (331)
119 1smk_A Malate dehydrogenase, g 86.9 0.83 2.8E-05 46.7 6.2 104 332-449 9-128 (326)
120 1ur5_A Malate dehydrogenase; o 86.8 0.87 3E-05 46.1 6.2 104 332-449 3-122 (309)
121 4gsl_A Ubiquitin-like modifier 86.7 0.59 2E-05 52.5 5.3 38 328-376 323-360 (615)
122 1oju_A MDH, malate dehydrogena 86.5 0.8 2.7E-05 46.5 5.8 104 333-449 2-121 (294)
123 2d4a_B Malate dehydrogenase; a 86.4 0.68 2.3E-05 47.1 5.2 99 333-449 1-119 (308)
124 3kkj_A Amine oxidase, flavin-c 86.4 0.63 2.2E-05 41.1 4.4 31 333-375 4-34 (336)
125 4huj_A Uncharacterized protein 86.4 0.77 2.6E-05 43.7 5.3 93 332-450 24-117 (220)
126 2j6i_A Formate dehydrogenase; 86.3 3.2 0.00011 43.2 10.4 144 279-448 88-259 (364)
127 3i83_A 2-dehydropantoate 2-red 86.2 1 3.4E-05 45.3 6.3 98 332-450 3-109 (320)
128 4hy3_A Phosphoglycerate oxidor 86.2 2.6 8.8E-05 44.3 9.6 178 310-528 134-339 (365)
129 1nvt_A Shikimate 5'-dehydrogen 86.1 0.64 2.2E-05 46.2 4.8 49 314-375 111-159 (287)
130 2ph5_A Homospermidine synthase 86.0 3.3 0.00011 45.2 10.6 98 331-447 13-115 (480)
131 1npy_A Hypothetical shikimate 86.0 0.98 3.4E-05 45.2 6.0 48 316-375 105-152 (271)
132 2xxj_A L-LDH, L-lactate dehydr 85.9 0.35 1.2E-05 49.3 2.8 100 333-449 2-119 (310)
133 3gt0_A Pyrroline-5-carboxylate 85.9 1.3 4.6E-05 42.5 6.8 98 332-450 3-101 (247)
134 1u8x_X Maltose-6'-phosphate gl 85.8 0.53 1.8E-05 51.0 4.3 126 331-472 28-194 (472)
135 1sc6_A PGDH, D-3-phosphoglycer 85.7 9.6 0.00033 40.3 13.7 191 297-528 90-311 (404)
136 1jw9_B Molybdopterin biosynthe 85.7 0.57 1.9E-05 46.0 4.1 38 328-376 28-65 (249)
137 4dgs_A Dehydrogenase; structur 85.7 4.7 0.00016 41.8 11.1 124 310-467 130-277 (340)
138 1qp8_A Formate dehydrogenase; 85.6 8.9 0.0003 38.8 13.0 117 298-447 71-211 (303)
139 3nep_X Malate dehydrogenase; h 85.3 0.57 2E-05 48.1 4.0 104 333-449 2-121 (314)
140 3vh1_A Ubiquitin-like modifier 85.3 0.7 2.4E-05 51.8 5.0 38 327-375 323-360 (598)
141 2d0i_A Dehydrogenase; structur 85.2 5.1 0.00017 41.1 11.0 91 327-447 142-236 (333)
142 2p4q_A 6-phosphogluconate dehy 85.1 2.1 7.1E-05 46.5 8.5 98 332-449 11-112 (497)
143 1up7_A 6-phospho-beta-glucosid 85.1 1.1 3.8E-05 47.8 6.2 124 332-472 3-164 (417)
144 2cuk_A Glycerate dehydrogenase 85.1 6.5 0.00022 39.9 11.7 117 298-448 87-231 (311)
145 2raf_A Putative dinucleotide-b 84.9 2.2 7.5E-05 40.4 7.6 80 327-450 15-94 (209)
146 3p7m_A Malate dehydrogenase; p 84.5 0.69 2.4E-05 47.5 4.2 106 330-449 4-125 (321)
147 3tl2_A Malate dehydrogenase; c 84.4 0.71 2.4E-05 47.4 4.2 107 329-449 6-130 (315)
148 1dxy_A D-2-hydroxyisocaproate 84.1 9.2 0.00032 39.2 12.4 121 298-449 90-236 (333)
149 1ks9_A KPA reductase;, 2-dehyd 84.0 1.5 5.1E-05 42.3 6.1 95 333-449 2-100 (291)
150 1j4a_A D-LDH, D-lactate dehydr 83.9 14 0.00046 37.9 13.5 140 297-468 91-255 (333)
151 1hye_A L-lactate/malate dehydr 83.7 1.5 5E-05 44.5 6.2 102 333-449 2-125 (313)
152 2yq5_A D-isomer specific 2-hyd 83.5 12 0.00043 38.7 13.2 121 298-449 92-239 (343)
153 3ado_A Lambda-crystallin; L-gu 83.4 1.3 4.5E-05 45.7 5.8 32 331-374 6-37 (319)
154 3b1f_A Putative prephenate deh 83.4 1.9 6.4E-05 42.2 6.6 96 331-448 6-103 (290)
155 3evt_A Phosphoglycerate dehydr 83.4 3.8 0.00013 42.2 9.1 188 298-527 83-300 (324)
156 1hdo_A Biliverdin IX beta redu 83.3 3.2 0.00011 37.3 7.7 97 331-445 3-110 (206)
157 3k96_A Glycerol-3-phosphate de 82.9 3.3 0.00011 42.9 8.5 102 331-450 29-137 (356)
158 3pqe_A L-LDH, L-lactate dehydr 82.8 0.69 2.4E-05 47.7 3.4 106 331-449 5-125 (326)
159 1f0y_A HCDH, L-3-hydroxyacyl-C 82.8 1.1 3.8E-05 44.5 4.8 32 332-375 16-47 (302)
160 2ew2_A 2-dehydropantoate 2-red 82.6 0.62 2.1E-05 45.5 2.8 98 332-450 4-112 (316)
161 2vns_A Metalloreductase steap3 82.3 1.2 4.2E-05 42.2 4.7 94 329-450 26-119 (215)
162 2pi1_A D-lactate dehydrogenase 82.2 6.2 0.00021 40.6 10.3 139 299-469 87-251 (334)
163 3ic5_A Putative saccharopine d 82.0 1 3.5E-05 37.1 3.6 84 331-436 5-92 (118)
164 3hg7_A D-isomer specific 2-hyd 81.9 3.1 0.00011 42.9 7.8 187 299-529 89-303 (324)
165 3lk7_A UDP-N-acetylmuramoylala 81.9 1.5 5.1E-05 46.5 5.6 118 328-486 6-126 (451)
166 4ina_A Saccharopine dehydrogen 81.9 1.7 5.8E-05 45.6 6.0 96 332-447 2-108 (405)
167 1x0v_A GPD-C, GPDH-C, glycerol 81.7 2.9 0.0001 42.0 7.5 109 331-450 8-128 (354)
168 2nac_A NAD-dependent formate d 81.6 6.7 0.00023 41.5 10.4 95 326-447 186-284 (393)
169 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.6 2.2 7.5E-05 45.9 6.9 97 333-449 3-106 (478)
170 1y8q_A Ubiquitin-like 1 activa 81.3 1.3 4.6E-05 45.7 4.9 37 328-375 33-69 (346)
171 2w2k_A D-mandelate dehydrogena 81.3 11 0.00038 38.7 11.8 97 326-448 158-258 (348)
172 3ggo_A Prephenate dehydrogenas 80.9 4.2 0.00014 41.2 8.3 93 332-446 34-128 (314)
173 3c24_A Putative oxidoreductase 80.9 2.7 9.2E-05 41.2 6.7 91 332-449 12-104 (286)
174 2iz1_A 6-phosphogluconate dehy 80.8 3.4 0.00011 44.3 7.9 99 331-449 5-106 (474)
175 1hyu_A AHPF, alkyl hydroperoxi 80.6 1.3 4.5E-05 47.6 4.7 100 261-375 134-244 (521)
176 3ldh_A Lactate dehydrogenase; 80.6 0.74 2.5E-05 47.8 2.7 105 331-449 21-141 (330)
177 2g76_A 3-PGDH, D-3-phosphoglyc 80.5 7.6 0.00026 40.1 10.2 119 299-447 112-256 (335)
178 3gpi_A NAD-dependent epimerase 80.3 1.6 5.3E-05 42.1 4.7 97 330-446 2-109 (286)
179 2pgd_A 6-phosphogluconate dehy 80.3 3.1 0.00011 44.7 7.5 98 332-449 3-104 (482)
180 1gdh_A D-glycerate dehydrogena 80.2 8.3 0.00028 39.3 10.3 122 298-447 89-239 (320)
181 3gvx_A Glycerate dehydrogenase 80.2 11 0.00038 38.1 11.2 176 310-529 85-282 (290)
182 1y7t_A Malate dehydrogenase; N 79.9 0.98 3.3E-05 45.6 3.2 110 332-449 5-133 (327)
183 3pp8_A Glyoxylate/hydroxypyruv 79.8 4.5 0.00015 41.4 8.2 191 298-528 86-301 (315)
184 3phh_A Shikimate dehydrogenase 79.8 1.5 5.1E-05 44.2 4.5 98 316-446 107-209 (269)
185 1jay_A Coenzyme F420H2:NADP+ o 79.8 0.86 2.9E-05 42.4 2.6 94 333-450 2-101 (212)
186 3vrd_B FCCB subunit, flavocyto 79.6 2.1 7.2E-05 43.5 5.6 35 331-375 2-36 (401)
187 4gwg_A 6-phosphogluconate dehy 79.3 3.5 0.00012 44.8 7.5 98 332-449 5-106 (484)
188 2h78_A Hibadh, 3-hydroxyisobut 79.1 1.7 6E-05 42.8 4.7 32 332-375 4-35 (302)
189 2uyy_A N-PAC protein; long-cha 79.0 2.5 8.6E-05 41.9 5.9 32 332-375 31-62 (316)
190 3gg9_A D-3-phosphoglycerate de 78.9 7.7 0.00026 40.3 9.7 161 326-528 155-325 (352)
191 3pef_A 6-phosphogluconate dehy 78.8 2.2 7.5E-05 41.9 5.3 32 332-375 2-33 (287)
192 1yj8_A Glycerol-3-phosphate de 78.8 2.5 8.4E-05 43.4 5.9 108 332-450 22-145 (375)
193 3k6j_A Protein F01G10.3, confi 78.8 2.2 7.4E-05 46.3 5.6 36 486-521 232-267 (460)
194 1bg6_A N-(1-D-carboxylethyl)-L 78.0 5.5 0.00019 39.7 8.0 93 332-447 5-110 (359)
195 4egb_A DTDP-glucose 4,6-dehydr 78.0 6.5 0.00022 38.7 8.5 106 329-446 22-149 (346)
196 2g5c_A Prephenate dehydrogenas 77.5 5.3 0.00018 38.8 7.6 97 332-449 2-99 (281)
197 1yb4_A Tartronic semialdehyde 77.5 3.5 0.00012 40.1 6.3 30 332-373 4-33 (295)
198 2x0j_A Malate dehydrogenase; o 77.3 3 0.0001 42.5 5.9 104 333-449 2-121 (294)
199 3pdu_A 3-hydroxyisobutyrate de 77.2 2.8 9.7E-05 41.1 5.6 31 333-375 3-33 (287)
200 4fgw_A Glycerol-3-phosphate de 77.2 2.2 7.5E-05 45.3 5.0 22 332-353 35-56 (391)
201 3fi9_A Malate dehydrogenase; s 76.9 3.1 0.00011 43.2 6.0 107 329-449 6-129 (343)
202 2izz_A Pyrroline-5-carboxylate 76.9 7.1 0.00024 39.2 8.5 99 331-450 22-122 (322)
203 3l6d_A Putative oxidoreductase 76.8 2.6 9E-05 42.1 5.3 36 328-375 6-41 (306)
204 3qsg_A NAD-binding phosphogluc 76.6 9.4 0.00032 38.2 9.3 33 332-375 25-57 (312)
205 4dll_A 2-hydroxy-3-oxopropiona 76.6 3.2 0.00011 41.8 5.9 34 330-375 30-63 (320)
206 3ip1_A Alcohol dehydrogenase, 76.5 15 0.00051 37.9 11.0 81 318-421 200-292 (404)
207 3cky_A 2-hydroxymethyl glutara 76.2 2.2 7.5E-05 41.8 4.4 32 332-375 5-36 (301)
208 1mx3_A CTBP1, C-terminal bindi 76.2 14 0.0005 38.1 10.8 209 278-527 88-333 (347)
209 3i6i_A Putative leucoanthocyan 76.1 1.3 4.4E-05 44.2 2.8 96 328-443 7-117 (346)
210 3o38_A Short chain dehydrogena 75.8 3.1 0.00011 39.9 5.3 36 328-375 19-56 (266)
211 3c85_A Putative glutathione-re 75.7 3.8 0.00013 37.2 5.7 37 328-375 36-72 (183)
212 1tt5_B Ubiquitin-activating en 75.6 1.8 6.1E-05 46.4 3.9 37 328-375 37-73 (434)
213 3qha_A Putative oxidoreductase 75.6 3.7 0.00013 40.8 5.9 32 332-375 16-47 (296)
214 3e8x_A Putative NAD-dependent 75.1 5.8 0.0002 37.1 6.9 97 327-446 17-131 (236)
215 4e5n_A Thermostable phosphite 74.8 7.5 0.00026 39.9 8.2 195 298-528 89-317 (330)
216 4aj2_A L-lactate dehydrogenase 74.8 1.4 4.8E-05 45.6 2.7 108 328-449 16-139 (331)
217 3abi_A Putative uncharacterize 74.7 1.8 6.2E-05 44.3 3.5 88 333-447 18-109 (365)
218 4ezb_A Uncharacterized conserv 74.5 3.9 0.00013 41.3 5.9 33 332-375 25-57 (317)
219 2qrj_A Saccharopine dehydrogen 74.2 7.3 0.00025 41.5 8.1 71 331-433 214-289 (394)
220 3doj_A AT3G25530, dehydrogenas 74.1 5.3 0.00018 39.9 6.7 35 329-375 19-53 (310)
221 3d1c_A Flavin-containing putat 74.1 2.9 9.9E-05 41.3 4.7 36 330-376 3-38 (369)
222 2pzm_A Putative nucleotide sug 73.5 6.8 0.00023 38.6 7.2 103 327-446 16-136 (330)
223 3kb6_A D-lactate dehydrogenase 73.3 17 0.00059 37.3 10.4 111 326-470 136-252 (334)
224 1y8q_B Anthracycline-, ubiquit 72.7 2.7 9.1E-05 47.5 4.5 37 328-375 14-50 (640)
225 4hb9_A Similarities with proba 72.7 3.2 0.00011 41.3 4.7 32 332-375 2-33 (412)
226 1vpd_A Tartronate semialdehyde 72.6 2.6 8.9E-05 41.2 3.9 32 332-375 6-37 (299)
227 3pdi_B Nitrogenase MOFE cofact 72.5 1.7 5.9E-05 46.6 2.8 182 159-420 177-384 (458)
228 2f1k_A Prephenate dehydrogenas 72.4 7.4 0.00025 37.6 7.1 90 333-447 2-92 (279)
229 2z1m_A GDP-D-mannose dehydrata 72.1 6.9 0.00024 38.1 6.8 101 330-446 2-127 (345)
230 3vtz_A Glucose 1-dehydrogenase 71.9 8.6 0.00029 37.3 7.5 79 326-422 9-92 (269)
231 3dhn_A NAD-dependent epimerase 71.3 5.1 0.00018 36.9 5.5 96 332-445 5-111 (227)
232 2q1w_A Putative nucleotide sug 70.9 12 0.00042 36.8 8.4 104 328-446 18-137 (333)
233 4a9w_A Monooxygenase; baeyer-v 70.9 3.3 0.00011 40.3 4.1 35 330-376 2-36 (357)
234 4id9_A Short-chain dehydrogena 70.7 9.3 0.00032 37.6 7.5 97 327-446 15-126 (347)
235 1i36_A Conserved hypothetical 70.6 7.7 0.00026 37.2 6.7 30 333-374 2-31 (264)
236 3s2u_A UDP-N-acetylglucosamine 70.5 5.5 0.00019 40.5 5.9 40 404-447 85-124 (365)
237 3r6d_A NAD-dependent epimerase 69.3 5.2 0.00018 37.0 5.0 93 332-444 6-106 (221)
238 3m2p_A UDP-N-acetylglucosamine 69.2 13 0.00045 36.0 8.1 93 332-446 3-109 (311)
239 3fwz_A Inner membrane protein 69.1 2.2 7.4E-05 37.5 2.2 32 332-375 8-39 (140)
240 4b4u_A Bifunctional protein fo 68.6 14 0.00048 38.1 8.4 84 310-431 158-242 (303)
241 2bka_A CC3, TAT-interacting pr 68.0 15 0.0005 34.1 7.9 102 329-446 16-132 (242)
242 3alj_A 2-methyl-3-hydroxypyrid 67.9 4.9 0.00017 40.5 4.9 38 328-377 8-45 (379)
243 2pv7_A T-protein [includes: ch 67.9 13 0.00045 36.9 7.9 32 332-375 22-54 (298)
244 3fbs_A Oxidoreductase; structu 67.9 4.7 0.00016 38.2 4.5 32 332-375 3-34 (297)
245 2x5o_A UDP-N-acetylmuramoylala 67.7 13 0.00045 39.0 8.3 110 329-473 3-112 (439)
246 2z2v_A Hypothetical protein PH 67.4 2.9 0.0001 43.4 3.2 120 330-478 15-137 (365)
247 3hyw_A Sulfide-quinone reducta 66.9 4 0.00014 42.4 4.1 34 332-375 3-36 (430)
248 3lzw_A Ferredoxin--NADP reduct 66.4 5.3 0.00018 38.5 4.6 33 331-375 7-39 (332)
249 5mdh_A Malate dehydrogenase; o 66.2 1.9 6.5E-05 44.5 1.4 110 332-449 4-132 (333)
250 2nvu_B Maltose binding protein 66.1 4.1 0.00014 46.2 4.3 35 330-375 410-444 (805)
251 1uzm_A 3-oxoacyl-[acyl-carrier 66.1 13 0.00045 35.3 7.3 78 326-422 10-92 (247)
252 3oz2_A Digeranylgeranylglycero 66.0 5 0.00017 39.5 4.4 31 333-375 6-36 (397)
253 3f8d_A Thioredoxin reductase ( 65.9 5.5 0.00019 38.1 4.5 33 331-375 15-47 (323)
254 2cvz_A Dehydrogenase, 3-hydrox 65.8 6.1 0.00021 38.2 4.9 30 333-375 3-32 (289)
255 3fg2_P Putative rubredoxin red 65.8 5.2 0.00018 41.0 4.6 36 332-377 2-37 (404)
256 1lss_A TRK system potassium up 65.8 6.8 0.00023 33.1 4.7 33 331-375 4-36 (140)
257 3ef6_A Toluene 1,2-dioxygenase 65.7 9.9 0.00034 39.1 6.8 37 332-378 3-39 (410)
258 1n2s_A DTDP-4-, DTDP-glucose o 65.6 6.7 0.00023 37.6 5.1 86 333-446 2-104 (299)
259 2yjz_A Metalloreductase steap4 69.1 1.3 4.4E-05 42.1 0.0 92 329-449 17-108 (201)
260 2zbw_A Thioredoxin reductase; 65.4 5.5 0.00019 38.8 4.5 34 331-376 5-38 (335)
261 2ahr_A Putative pyrroline carb 65.0 4.6 0.00016 38.7 3.8 90 332-449 4-93 (259)
262 3g0o_A 3-hydroxyisobutyrate de 64.6 4.9 0.00017 39.9 4.0 32 332-375 8-39 (303)
263 3lxd_A FAD-dependent pyridine 64.5 5.8 0.0002 40.7 4.7 38 330-377 8-45 (415)
264 4b8w_A GDP-L-fucose synthase; 64.5 8.8 0.0003 36.5 5.7 93 328-446 3-113 (319)
265 3klj_A NAD(FAD)-dependent dehy 64.4 6.4 0.00022 40.6 5.0 36 331-378 9-44 (385)
266 2ywl_A Thioredoxin reductase r 64.4 6.6 0.00023 35.0 4.5 32 332-375 2-33 (180)
267 3slg_A PBGP3 protein; structur 64.2 25 0.00087 34.8 9.2 101 328-446 21-141 (372)
268 3itj_A Thioredoxin reductase 1 64.2 4.7 0.00016 39.0 3.8 33 331-375 22-54 (338)
269 1ygy_A PGDH, D-3-phosphoglycer 64.1 32 0.0011 37.4 10.7 120 298-446 88-232 (529)
270 3nix_A Flavoprotein/dehydrogen 64.1 8.3 0.00028 38.9 5.7 35 331-377 5-39 (421)
271 3hhp_A Malate dehydrogenase; M 63.8 6.7 0.00023 40.1 4.9 103 333-449 2-121 (312)
272 2q7v_A Thioredoxin reductase; 63.8 5.6 0.00019 38.8 4.2 33 331-375 8-40 (325)
273 1tt5_A APPBP1, amyloid protein 63.8 4 0.00014 44.8 3.5 38 327-375 28-65 (531)
274 3llv_A Exopolyphosphatase-rela 63.7 6.7 0.00023 33.9 4.3 34 330-375 5-38 (141)
275 3enk_A UDP-glucose 4-epimerase 63.6 22 0.00074 34.7 8.4 97 331-446 5-129 (341)
276 3h8l_A NADH oxidase; membrane 63.5 6 0.0002 40.4 4.5 36 332-376 2-37 (409)
277 1e6u_A GDP-fucose synthetase; 63.3 9 0.00031 37.1 5.6 87 331-446 3-107 (321)
278 3cgv_A Geranylgeranyl reductas 63.1 5.6 0.00019 39.6 4.2 35 330-376 3-37 (397)
279 3nrc_A Enoyl-[acyl-carrier-pro 63.0 11 0.00038 36.5 6.2 79 328-423 23-115 (280)
280 2jae_A L-amino acid oxidase; o 62.8 6.3 0.00022 41.0 4.7 42 324-377 4-45 (489)
281 3ehe_A UDP-glucose 4-epimerase 62.8 22 0.00076 34.3 8.3 95 333-446 3-114 (313)
282 1hxh_A 3BETA/17BETA-hydroxyste 62.6 10 0.00034 36.2 5.7 37 328-375 3-39 (253)
283 3dme_A Conserved exported prot 62.6 7 0.00024 38.1 4.7 33 331-375 4-36 (369)
284 3c96_A Flavin-containing monoo 62.5 7.3 0.00025 39.7 5.0 35 331-376 4-38 (410)
285 2vou_A 2,6-dihydroxypyridine h 62.5 7.8 0.00027 39.3 5.2 35 330-376 4-38 (397)
286 3axb_A Putative oxidoreductase 62.5 6.4 0.00022 40.5 4.6 38 326-374 18-55 (448)
287 2xdo_A TETX2 protein; tetracyc 62.3 6.6 0.00023 39.9 4.6 36 329-376 24-59 (398)
288 1ryi_A Glycine oxidase; flavop 62.1 7.1 0.00024 38.8 4.7 35 331-377 17-51 (382)
289 2x3n_A Probable FAD-dependent 62.0 6.6 0.00023 39.6 4.5 34 331-376 6-39 (399)
290 3ab1_A Ferredoxin--NADP reduct 61.8 7.3 0.00025 38.6 4.7 35 330-376 13-47 (360)
291 3rp8_A Flavoprotein monooxygen 61.6 7.5 0.00026 39.4 4.8 36 329-376 21-56 (407)
292 2c20_A UDP-glucose 4-epimerase 61.4 15 0.00052 35.6 6.9 98 333-446 3-118 (330)
293 1y56_B Sarcosine oxidase; dehy 61.1 7.4 0.00025 38.7 4.6 34 331-376 5-38 (382)
294 3cty_A Thioredoxin reductase; 60.9 7.3 0.00025 37.8 4.5 33 331-375 16-48 (319)
295 1np3_A Ketol-acid reductoisome 60.9 11 0.00039 38.2 6.1 88 329-443 14-104 (338)
296 1id1_A Putative potassium chan 60.7 8.8 0.0003 33.8 4.6 34 330-375 2-35 (153)
297 2gf3_A MSOX, monomeric sarcosi 60.3 7.6 0.00026 38.6 4.5 36 331-378 3-38 (389)
298 2gag_B Heterotetrameric sarcos 60.2 8.9 0.00031 38.3 5.1 36 331-376 21-56 (405)
299 1yvv_A Amine oxidase, flavin-c 60.2 7.3 0.00025 37.9 4.3 33 332-376 3-35 (336)
300 2q0l_A TRXR, thioredoxin reduc 59.8 8 0.00028 37.2 4.5 33 332-375 2-34 (311)
301 3r9u_A Thioredoxin reductase; 59.8 8.1 0.00028 36.9 4.5 33 331-375 4-37 (315)
302 2dq4_A L-threonine 3-dehydroge 59.7 9.4 0.00032 38.3 5.1 49 314-374 149-197 (343)
303 3k7m_X 6-hydroxy-L-nicotine ox 59.6 8.4 0.00029 39.1 4.8 32 333-376 3-34 (431)
304 1trb_A Thioredoxin reductase; 59.5 5.5 0.00019 38.5 3.3 34 330-375 4-37 (320)
305 3i3l_A Alkylhalidase CMLS; fla 59.5 13 0.00043 41.1 6.5 38 329-378 21-58 (591)
306 1pqw_A Polyketide synthase; ro 59.5 21 0.00072 32.4 7.1 50 314-375 22-72 (198)
307 3cmm_A Ubiquitin-activating en 59.3 8.4 0.00029 45.6 5.3 38 327-375 23-60 (1015)
308 4eqs_A Coenzyme A disulfide re 59.1 7.8 0.00027 40.5 4.6 34 333-376 2-35 (437)
309 2vdc_G Glutamate synthase [NAD 59.0 9 0.00031 40.7 5.1 34 330-375 121-154 (456)
310 3ec7_A Putative dehydrogenase; 59.0 4.7 0.00016 41.1 2.8 96 329-443 21-116 (357)
311 3i1j_A Oxidoreductase, short c 58.7 20 0.00069 33.5 7.0 38 327-375 10-47 (247)
312 1zk7_A HGII, reductase, mercur 58.7 8.9 0.0003 40.0 4.9 33 331-375 4-36 (467)
313 3dje_A Fructosyl amine: oxygen 58.6 8.5 0.00029 39.4 4.7 37 331-378 6-42 (438)
314 3un1_A Probable oxidoreductase 58.4 27 0.00091 33.6 7.9 76 329-422 26-107 (260)
315 3ek2_A Enoyl-(acyl-carrier-pro 58.2 9.5 0.00033 36.2 4.6 38 326-375 9-49 (271)
316 3uox_A Otemo; baeyer-villiger 57.9 9.9 0.00034 41.3 5.3 36 329-376 7-42 (545)
317 3e48_A Putative nucleoside-dip 57.9 14 0.00047 35.4 5.7 97 333-446 2-106 (289)
318 1c0p_A D-amino acid oxidase; a 57.8 11 0.00036 37.6 5.1 34 331-376 6-39 (363)
319 2gqw_A Ferredoxin reductase; f 57.8 11 0.00036 38.9 5.3 38 331-378 7-44 (408)
320 2uzz_A N-methyl-L-tryptophan o 57.6 8.4 0.00029 38.1 4.3 35 332-378 3-37 (372)
321 3tzq_B Short-chain type dehydr 57.5 9.8 0.00034 36.8 4.7 78 327-422 7-96 (271)
322 2dkn_A 3-alpha-hydroxysteroid 57.4 12 0.00043 34.6 5.2 68 333-422 3-73 (255)
323 2q1s_A Putative nucleotide sug 57.2 17 0.00058 36.5 6.5 103 328-446 29-151 (377)
324 2d8a_A PH0655, probable L-thre 57.1 9.1 0.00031 38.5 4.5 48 314-374 153-200 (348)
325 1k0i_A P-hydroxybenzoate hydro 57.1 10 0.00035 38.1 4.9 33 332-376 3-35 (394)
326 4gqa_A NAD binding oxidoreduct 56.9 6.9 0.00024 40.4 3.6 106 319-435 13-119 (412)
327 3tpc_A Short chain alcohol deh 56.7 27 0.00092 33.2 7.6 77 328-422 4-92 (257)
328 2oln_A NIKD protein; flavoprot 56.6 9.8 0.00034 38.2 4.7 36 331-378 4-39 (397)
329 2eq6_A Pyruvate dehydrogenase 56.5 8.5 0.00029 40.4 4.3 35 330-376 5-39 (464)
330 2gv8_A Monooxygenase; FMO, FAD 56.4 9.5 0.00032 39.6 4.6 36 330-375 5-40 (447)
331 3ew7_A LMO0794 protein; Q8Y8U8 56.4 30 0.001 31.2 7.6 91 333-446 2-103 (221)
332 1hdc_A 3-alpha, 20 beta-hydrox 56.2 11 0.00038 36.0 4.8 37 328-375 2-38 (254)
333 1vl0_A DTDP-4-dehydrorhamnose 56.2 11 0.00037 36.1 4.7 88 328-446 9-113 (292)
334 3urh_A Dihydrolipoyl dehydroge 56.1 9.5 0.00033 40.2 4.6 34 331-376 25-58 (491)
335 2x4g_A Nucleoside-diphosphate- 56.0 23 0.00079 34.4 7.1 96 333-446 15-126 (342)
336 3qvo_A NMRA family protein; st 55.9 14 0.00048 34.6 5.4 101 329-446 21-125 (236)
337 3sx6_A Sulfide-quinone reducta 55.7 11 0.00037 39.1 4.9 36 332-376 5-40 (437)
338 3grf_A Ornithine carbamoyltran 55.6 35 0.0012 35.4 8.6 131 269-417 96-240 (328)
339 2xve_A Flavin-containing monoo 55.6 9.6 0.00033 40.2 4.6 38 332-375 3-40 (464)
340 4ej6_A Putative zinc-binding d 55.4 25 0.00086 35.8 7.5 91 306-420 159-262 (370)
341 2p5y_A UDP-glucose 4-epimerase 55.4 18 0.0006 35.0 6.1 98 333-446 2-117 (311)
342 2cul_A Glucose-inhibited divis 55.3 11 0.00036 35.7 4.4 33 331-375 3-35 (232)
343 1vdc_A NTR, NADPH dependent th 55.3 8.4 0.00029 37.5 3.8 33 330-374 7-39 (333)
344 3dfz_A SIRC, precorrin-2 dehyd 55.2 9.2 0.00031 37.4 4.0 36 328-375 28-63 (223)
345 3s5w_A L-ornithine 5-monooxyge 55.2 8.1 0.00028 39.9 3.9 39 331-377 30-69 (463)
346 3iwa_A FAD-dependent pyridine 55.2 8.1 0.00028 40.4 3.9 37 331-377 3-39 (472)
347 3sc6_A DTDP-4-dehydrorhamnose 55.1 8 0.00027 37.0 3.5 83 333-446 7-106 (287)
348 2r9z_A Glutathione amide reduc 54.9 10 0.00035 39.8 4.7 33 331-375 4-36 (463)
349 4ep1_A Otcase, ornithine carba 54.8 60 0.002 33.9 10.3 131 269-421 121-257 (340)
350 2nu8_A Succinyl-COA ligase [AD 54.6 23 0.00079 35.4 7.0 86 331-442 7-93 (288)
351 1dxl_A Dihydrolipoamide dehydr 54.6 12 0.00041 39.0 5.0 33 331-375 6-38 (470)
352 3ktd_A Prephenate dehydrogenas 54.6 13 0.00043 38.5 5.2 89 332-446 9-101 (341)
353 1o5i_A 3-oxoacyl-(acyl carrier 54.5 36 0.0012 32.3 8.1 77 327-422 15-92 (249)
354 2o7s_A DHQ-SDH PR, bifunctiona 54.4 14 0.00049 39.9 5.8 36 328-375 361-396 (523)
355 3pid_A UDP-glucose 6-dehydroge 54.3 28 0.00094 37.3 7.9 44 412-461 146-189 (432)
356 3uog_A Alcohol dehydrogenase; 54.3 28 0.00097 35.2 7.7 44 319-374 178-221 (363)
357 3tpf_A Otcase, ornithine carba 54.3 86 0.0029 32.1 11.2 129 269-419 87-222 (307)
358 2yy7_A L-threonine dehydrogena 54.3 11 0.00036 36.4 4.3 99 332-446 3-118 (312)
359 2qcu_A Aerobic glycerol-3-phos 54.1 10 0.00036 40.2 4.6 34 331-376 3-36 (501)
360 4ap3_A Steroid monooxygenase; 54.1 10 0.00035 41.2 4.6 35 330-376 20-54 (549)
361 2c5a_A GDP-mannose-3', 5'-epim 54.0 41 0.0014 33.8 8.8 99 330-446 28-145 (379)
362 3gg2_A Sugar dehydrogenase, UD 53.9 10 0.00034 40.5 4.4 32 332-375 3-34 (450)
363 3nrn_A Uncharacterized protein 53.9 13 0.00043 38.0 5.0 33 333-377 2-34 (421)
364 2hqm_A GR, grase, glutathione 53.8 10 0.00035 39.9 4.4 35 330-376 10-44 (479)
365 3ka7_A Oxidoreductase; structu 53.6 12 0.00043 37.7 4.9 32 333-376 2-33 (425)
366 2wpf_A Trypanothione reductase 53.6 14 0.00047 39.3 5.4 32 331-373 7-38 (495)
367 3h28_A Sulfide-quinone reducta 53.4 12 0.0004 38.7 4.7 35 332-376 3-37 (430)
368 3e03_A Short chain dehydrogena 53.1 41 0.0014 32.4 8.3 37 328-375 3-39 (274)
369 3dqp_A Oxidoreductase YLBE; al 53.1 25 0.00084 32.3 6.4 94 333-446 2-106 (219)
370 3r1i_A Short-chain type dehydr 53.1 33 0.0011 33.4 7.6 78 327-422 28-120 (276)
371 3mz0_A Inositol 2-dehydrogenas 53.0 5.9 0.0002 39.9 2.3 93 332-443 3-95 (344)
372 1xg5_A ARPG836; short chain de 52.8 28 0.00096 33.4 7.1 37 328-375 29-65 (279)
373 2qae_A Lipoamide, dihydrolipoy 52.7 12 0.00041 39.1 4.7 34 331-376 2-35 (468)
374 3p19_A BFPVVD8, putative blue 52.6 14 0.00049 35.7 5.0 82 326-422 11-98 (266)
375 3ruf_A WBGU; rossmann fold, UD 52.4 9.1 0.00031 37.7 3.6 101 329-446 23-151 (351)
376 2fwm_X 2,3-dihydro-2,3-dihydro 52.3 49 0.0017 31.2 8.6 76 328-421 4-84 (250)
377 3gaf_A 7-alpha-hydroxysteroid 52.2 22 0.00074 34.0 6.1 38 327-375 8-45 (256)
378 3v76_A Flavoprotein; structura 52.2 11 0.00038 39.5 4.3 35 331-377 27-61 (417)
379 4gcm_A TRXR, thioredoxin reduc 52.2 12 0.00041 36.3 4.3 32 332-375 7-38 (312)
380 1zk4_A R-specific alcohol dehy 52.1 8.2 0.00028 36.2 3.1 37 328-375 3-39 (251)
381 2nm0_A Probable 3-oxacyl-(acyl 52.1 33 0.0011 32.8 7.4 76 327-421 17-97 (253)
382 1w4x_A Phenylacetone monooxyge 52.0 13 0.00045 39.9 5.0 36 329-376 14-49 (542)
383 3euw_A MYO-inositol dehydrogen 52.0 7.2 0.00025 39.2 2.8 90 332-443 5-94 (344)
384 1dlj_A UDP-glucose dehydrogena 51.9 12 0.00042 39.0 4.6 30 333-375 2-31 (402)
385 2aqj_A Tryptophan halogenase, 51.9 12 0.00042 39.9 4.7 37 331-376 5-41 (538)
386 2q2v_A Beta-D-hydroxybutyrate 51.9 12 0.00042 35.5 4.3 37 328-375 1-37 (255)
387 1mo9_A ORF3; nucleotide bindin 51.9 11 0.00039 40.2 4.4 35 330-376 42-76 (523)
388 4g6h_A Rotenone-insensitive NA 51.9 6.5 0.00022 42.2 2.6 32 332-375 43-74 (502)
389 1sb8_A WBPP; epimerase, 4-epim 51.8 14 0.00046 36.6 4.7 101 329-446 25-153 (352)
390 2yqu_A 2-oxoglutarate dehydrog 51.8 12 0.00042 38.8 4.6 33 332-376 2-34 (455)
391 3kd9_A Coenzyme A disulfide re 51.8 17 0.00058 37.7 5.7 37 331-377 3-39 (449)
392 2a8x_A Dihydrolipoyl dehydroge 51.7 11 0.00039 39.2 4.3 33 331-375 3-35 (464)
393 3sxp_A ADP-L-glycero-D-mannohe 51.7 26 0.00088 34.8 6.8 108 327-446 6-138 (362)
394 1fl2_A Alkyl hydroperoxide red 51.7 12 0.00039 36.1 4.1 32 332-375 2-33 (310)
395 2e4g_A Tryptophan halogenase; 51.6 13 0.00044 40.1 4.8 38 331-377 25-62 (550)
396 3uko_A Alcohol dehydrogenase c 51.6 26 0.00089 35.6 6.9 45 319-374 182-226 (378)
397 2ehd_A Oxidoreductase, oxidore 51.5 23 0.00077 32.9 6.0 34 331-375 5-38 (234)
398 2dtx_A Glucose 1-dehydrogenase 51.5 50 0.0017 31.7 8.6 76 328-422 5-85 (264)
399 2weu_A Tryptophan 5-halogenase 51.5 9.6 0.00033 40.1 3.7 37 332-377 3-39 (511)
400 4a2c_A Galactitol-1-phosphate 51.4 36 0.0012 33.8 7.7 55 308-374 139-193 (346)
401 1m6i_A Programmed cell death p 51.4 15 0.00051 39.0 5.2 38 330-377 10-47 (493)
402 4hkt_A Inositol 2-dehydrogenas 51.4 9.2 0.00031 38.2 3.4 89 332-443 4-92 (331)
403 2d1y_A Hypothetical protein TT 51.3 23 0.00079 33.7 6.1 79 328-422 3-88 (256)
404 3k30_A Histamine dehydrogenase 51.2 15 0.00052 40.8 5.5 34 331-376 391-424 (690)
405 1q1r_A Putidaredoxin reductase 51.1 15 0.0005 38.2 5.0 37 331-377 4-40 (431)
406 2wm3_A NMRA-like family domain 51.0 6.8 0.00023 37.9 2.3 99 331-447 5-115 (299)
407 1rsg_A FMS1 protein; FAD bindi 50.9 4.5 0.00015 42.9 1.1 25 329-353 6-30 (516)
408 1zmd_A Dihydrolipoyl dehydroge 50.9 13 0.00043 39.0 4.5 34 331-376 6-39 (474)
409 4gde_A UDP-galactopyranose mut 50.7 15 0.00051 38.1 5.0 23 331-353 10-32 (513)
410 1ges_A Glutathione reductase; 50.7 11 0.00037 39.4 3.9 33 331-375 4-36 (450)
411 3m6i_A L-arabinitol 4-dehydrog 50.6 16 0.00054 36.9 5.1 55 308-374 158-212 (363)
412 3ntd_A FAD-dependent pyridine 50.5 17 0.00057 38.8 5.4 37 332-378 2-38 (565)
413 3n74_A 3-ketoacyl-(acyl-carrie 50.4 11 0.00037 35.8 3.6 78 327-422 5-94 (261)
414 2ydy_A Methionine adenosyltran 50.3 30 0.001 33.4 6.8 92 331-446 2-110 (315)
415 2qa2_A CABE, polyketide oxygen 50.0 14 0.00047 39.5 4.7 34 330-375 11-44 (499)
416 1yqd_A Sinapyl alcohol dehydro 50.0 32 0.0011 34.8 7.3 49 314-374 171-219 (366)
417 3h7a_A Short chain dehydrogena 50.0 31 0.0011 32.9 6.8 77 328-422 4-94 (252)
418 1xq6_A Unknown protein; struct 50.0 19 0.00063 33.2 5.1 101 329-446 2-133 (253)
419 1ebd_A E3BD, dihydrolipoamide 49.9 12 0.00041 38.9 4.1 32 332-375 4-35 (455)
420 2bry_A NEDD9 interacting prote 49.9 15 0.0005 39.3 4.9 37 330-378 91-127 (497)
421 3qj4_A Renalase; FAD/NAD(P)-bi 49.8 9.5 0.00033 37.7 3.2 35 332-375 2-36 (342)
422 3ihm_A Styrene monooxygenase A 49.8 12 0.00042 38.7 4.2 32 332-375 23-54 (430)
423 1nff_A Putative oxidoreductase 49.7 19 0.00065 34.5 5.3 38 327-375 3-40 (260)
424 3uuw_A Putative oxidoreductase 49.6 9 0.00031 37.8 3.0 90 330-443 5-95 (308)
425 1iy8_A Levodione reductase; ox 49.5 25 0.00084 33.7 6.0 38 327-375 9-46 (267)
426 3f1l_A Uncharacterized oxidore 49.5 28 0.00096 33.1 6.4 38 327-375 8-45 (252)
427 2a87_A TRXR, TR, thioredoxin r 49.5 11 0.00038 37.0 3.6 34 330-375 13-46 (335)
428 1rkx_A CDP-glucose-4,6-dehydra 49.5 28 0.00096 34.3 6.6 102 329-446 7-132 (357)
429 4imr_A 3-oxoacyl-(acyl-carrier 49.4 60 0.0021 31.4 8.9 76 328-421 30-119 (275)
430 4dry_A 3-oxoacyl-[acyl-carrier 49.4 18 0.00063 35.3 5.2 39 326-375 28-66 (281)
431 2v3a_A Rubredoxin reductase; a 49.3 13 0.00043 37.7 4.1 35 331-375 4-38 (384)
432 1yb1_A 17-beta-hydroxysteroid 49.3 36 0.0012 32.7 7.2 38 327-375 27-64 (272)
433 2zb4_A Prostaglandin reductase 49.2 28 0.00095 34.9 6.6 56 309-375 137-195 (357)
434 3o0h_A Glutathione reductase; 49.2 15 0.00053 38.5 4.9 33 331-375 26-58 (484)
435 3moi_A Probable dehydrogenase; 49.2 7 0.00024 40.2 2.2 89 332-442 3-92 (387)
436 2zcu_A Uncharacterized oxidore 49.0 12 0.00041 35.5 3.7 95 333-446 1-104 (286)
437 1ek6_A UDP-galactose 4-epimera 49.0 33 0.0011 33.5 7.0 101 332-446 3-132 (348)
438 1lvl_A Dihydrolipoamide dehydr 48.9 13 0.00046 38.8 4.3 33 331-375 5-37 (458)
439 1fjh_A 3alpha-hydroxysteroid d 48.8 27 0.00092 32.8 6.1 70 332-422 2-73 (257)
440 1onf_A GR, grase, glutathione 48.8 13 0.00045 39.4 4.3 33 332-376 3-35 (500)
441 1pl8_A Human sorbitol dehydrog 48.8 20 0.00069 36.1 5.5 49 314-374 156-204 (356)
442 3l8k_A Dihydrolipoyl dehydroge 48.7 16 0.00053 38.3 4.8 35 331-377 4-38 (466)
443 3gwf_A Cyclohexanone monooxyge 48.7 11 0.00039 40.8 3.9 36 330-376 7-42 (540)
444 3k31_A Enoyl-(acyl-carrier-pro 48.7 21 0.00073 35.0 5.6 81 326-422 25-119 (296)
445 1rpn_A GDP-mannose 4,6-dehydra 48.7 31 0.0011 33.5 6.7 105 328-446 11-138 (335)
446 4eez_A Alcohol dehydrogenase 1 48.5 41 0.0014 33.3 7.7 47 316-374 150-196 (348)
447 1gee_A Glucose 1-dehydrogenase 48.5 20 0.00069 33.8 5.1 37 327-374 3-39 (261)
448 3cgb_A Pyridine nucleotide-dis 48.4 13 0.00043 39.2 4.1 63 306-378 8-73 (480)
449 2pnf_A 3-oxoacyl-[acyl-carrier 48.4 28 0.00096 32.3 6.1 37 328-375 4-40 (248)
450 3ko8_A NAD-dependent epimerase 48.3 52 0.0018 31.5 8.2 94 333-446 2-113 (312)
451 4b63_A L-ornithine N5 monooxyg 48.1 10 0.00035 40.5 3.4 42 334-375 42-85 (501)
452 3ak4_A NADH-dependent quinucli 48.1 17 0.00059 34.6 4.7 37 328-375 9-45 (263)
453 2qa1_A PGAE, polyketide oxygen 48.0 14 0.00048 39.4 4.4 36 328-375 8-43 (500)
454 2p2s_A Putative oxidoreductase 47.9 32 0.0011 34.3 6.8 83 331-434 4-88 (336)
455 4a5l_A Thioredoxin reductase; 47.8 13 0.00044 35.7 3.7 32 332-375 5-36 (314)
456 3csu_A Protein (aspartate carb 47.8 1.5E+02 0.005 30.4 11.8 131 269-420 94-230 (310)
457 3db2_A Putative NADPH-dependen 47.7 12 0.00039 37.9 3.5 91 331-443 5-95 (354)
458 3evn_A Oxidoreductase, GFO/IDH 47.7 21 0.00071 35.6 5.4 93 330-443 4-96 (329)
459 1v59_A Dihydrolipoamide dehydr 47.6 17 0.00057 38.0 4.8 34 331-376 5-38 (478)
460 3lad_A Dihydrolipoamide dehydr 47.6 17 0.00058 37.9 4.9 33 331-375 3-35 (476)
461 2bi7_A UDP-galactopyranose mut 47.5 17 0.00057 37.4 4.7 34 331-376 3-36 (384)
462 2fzw_A Alcohol dehydrogenase c 47.4 38 0.0013 34.2 7.3 45 319-374 179-223 (373)
463 1kyq_A Met8P, siroheme biosynt 47.3 11 0.00039 38.0 3.3 36 328-375 10-45 (274)
464 2bc0_A NADH oxidase; flavoprot 47.3 18 0.00062 38.1 5.1 37 331-376 35-71 (490)
465 1p0f_A NADP-dependent alcohol 47.3 38 0.0013 34.2 7.3 45 319-374 180-224 (373)
466 3c4a_A Probable tryptophan hyd 47.3 17 0.00059 36.6 4.7 33 333-375 2-34 (381)
467 3ihg_A RDME; flavoenzyme, anth 47.2 14 0.00048 39.3 4.2 34 331-376 5-38 (535)
468 3rih_A Short chain dehydrogena 47.2 34 0.0011 33.8 6.7 38 327-375 37-74 (293)
469 1xhc_A NADH oxidase /nitrite r 47.1 12 0.0004 38.2 3.5 35 331-378 8-42 (367)
470 3v8b_A Putative dehydrogenase, 47.1 29 0.00099 33.9 6.2 77 328-422 25-116 (283)
471 2zat_A Dehydrogenase/reductase 46.9 42 0.0014 31.8 7.2 39 326-375 9-47 (260)
472 1f8f_A Benzyl alcohol dehydrog 46.9 38 0.0013 34.2 7.3 50 314-374 174-223 (371)
473 3rwb_A TPLDH, pyridoxal 4-dehy 46.8 16 0.00055 34.8 4.2 38 327-375 2-39 (247)
474 3tox_A Short chain dehydrogena 46.7 25 0.00085 34.4 5.6 37 328-375 5-41 (280)
475 2cdc_A Glucose dehydrogenase g 46.6 49 0.0017 33.4 8.0 33 331-375 181-213 (366)
476 1kol_A Formaldehyde dehydrogen 46.4 36 0.0012 34.7 7.0 48 315-374 171-218 (398)
477 1pvv_A Otcase, ornithine carba 46.4 1.4E+02 0.0048 30.6 11.4 130 269-419 97-231 (315)
478 3lov_A Protoporphyrinogen oxid 46.3 25 0.00084 36.3 5.8 36 331-376 4-39 (475)
479 3op4_A 3-oxoacyl-[acyl-carrier 46.2 11 0.00039 35.8 3.0 77 328-422 6-94 (248)
480 3e1t_A Halogenase; flavoprotei 46.1 13 0.00044 39.5 3.8 35 330-376 6-40 (512)
481 3st7_A Capsular polysaccharide 46.1 47 0.0016 33.1 7.7 79 333-446 2-94 (369)
482 1ojt_A Surface protein; redox- 46.0 17 0.00059 38.1 4.7 34 331-376 6-39 (482)
483 3c4n_A Uncharacterized protein 46.0 19 0.00066 36.7 4.9 35 332-376 37-71 (405)
484 2rgh_A Alpha-glycerophosphate 46.0 17 0.00058 39.6 4.7 34 331-376 32-65 (571)
485 4a7p_A UDP-glucose dehydrogena 46.0 54 0.0018 35.1 8.5 33 331-375 8-40 (446)
486 4gbj_A 6-phosphogluconate dehy 45.9 39 0.0013 33.8 7.0 31 332-374 6-36 (297)
487 1zq6_A Otcase, ornithine carba 45.9 1.5E+02 0.0053 31.0 11.7 117 286-421 145-275 (359)
488 3t7c_A Carveol dehydrogenase; 45.8 63 0.0022 31.6 8.5 38 327-375 24-61 (299)
489 2e1m_A L-glutamate oxidase; L- 45.8 19 0.00064 37.7 4.8 35 329-375 42-76 (376)
490 3fpz_A Thiazole biosynthetic e 45.5 19 0.00063 35.6 4.6 36 330-375 64-99 (326)
491 3oqb_A Oxidoreductase; structu 45.5 13 0.00044 37.9 3.4 96 329-443 4-112 (383)
492 1y1p_A ARII, aldehyde reductas 45.4 57 0.002 31.4 8.0 100 329-446 9-132 (342)
493 1vl8_A Gluconate 5-dehydrogena 45.4 61 0.0021 31.1 8.1 38 327-375 17-54 (267)
494 3uxy_A Short-chain dehydrogena 45.3 44 0.0015 32.3 7.1 37 328-375 25-61 (266)
495 3tsc_A Putative oxidoreductase 45.3 38 0.0013 32.6 6.7 39 327-376 7-45 (277)
496 1s3e_A Amine oxidase [flavin-c 45.3 18 0.00061 38.1 4.6 34 331-376 4-37 (520)
497 1t2a_A GDP-mannose 4,6 dehydra 45.2 39 0.0013 33.6 6.9 101 332-446 25-156 (375)
498 2gqf_A Hypothetical protein HI 45.1 14 0.00049 38.2 3.8 35 331-377 4-38 (401)
499 1o94_A Tmadh, trimethylamine d 45.0 18 0.00063 40.5 4.9 35 330-376 388-422 (729)
500 3dk9_A Grase, GR, glutathione 45.0 16 0.00054 38.3 4.2 34 330-375 19-52 (478)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=5.7e-207 Score=1663.42 Aligned_cols=540 Identities=52% Similarity=0.928 Sum_probs=532.2
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 007754 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (591)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~ 129 (591)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCccccchh
Q 007754 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (591)
Q Consensus 130 ~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (591)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||||++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccH
Q 007754 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (591)
Q Consensus 210 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A 289 (591)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007754 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (591)
Q Consensus 290 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (591)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 370 ~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007754 450 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 450 ~~aEct~edA~~wt~GraifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~v~ 528 (591)
+++|||||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||+|||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007754 529 EENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 591 (591)
Q Consensus 529 ~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~d~~~~i~~~~~~P~Y~~~~ 591 (591)
++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999988788899999999999999999873
No 2
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.9e-206 Score=1666.37 Aligned_cols=544 Identities=47% Similarity=0.847 Sum_probs=535.2
Q ss_pred ccccccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHH
Q 007754 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (591)
Q Consensus 46 ~~~~~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ 125 (591)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCc
Q 007754 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (591)
Q Consensus 126 ll~~~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (591)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeec
Q 007754 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (591)
Q Consensus 204 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfED 283 (591)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChh
Q 007754 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (591)
Q Consensus 284 f~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~e 363 (591)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974 99999
Q ss_pred hhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 364 eA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999876778999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007754 444 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 523 (591)
Q Consensus 444 aLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aL 523 (591)
||||||+++|||||||++||+|+|||||||||+||+|+||+++||||||+|+|||||||+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007754 524 AKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 591 (591)
Q Consensus 524 A~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~d~~~~i~~~~~~P~Y~~~~ 591 (591)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|+++.||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999988788899999999999999999873
No 3
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=4.7e-206 Score=1660.46 Aligned_cols=541 Identities=50% Similarity=0.908 Sum_probs=532.5
Q ss_pred ccccccccCCCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 007754 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (591)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~ 129 (591)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.||++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCccccchh
Q 007754 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (591)
Q Consensus 130 ~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 209 (591)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|+|||||||||||||||||++|||||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccH
Q 007754 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (591)
Q Consensus 210 Kl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A 289 (591)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++||+|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007754 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (591)
Q Consensus 290 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (591)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCcccCCCcCCCchhhhhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 370 ~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999446999999999987666 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcc
Q 007754 448 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQ 526 (591)
Q Consensus 448 Pt~~aEct~edA~~wt~GraifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~ 526 (591)
||+++|||||||++||+|+|||||||||+||+| +||+++||||||+|+|||||||+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccCCCCCCC
Q 007754 527 VTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 591 (591)
Q Consensus 527 v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~d~~~~i~~~~~~P~Y~~~~ 591 (591)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..+.|+|+.+|+++.||+|.|++|+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999988788899999999999999999873
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=4e-121 Score=976.65 Aligned_cols=383 Identities=32% Similarity=0.414 Sum_probs=345.6
Q ss_pred hhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCC-Ccccc
Q 007754 128 IDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGI 206 (591)
Q Consensus 128 ~~~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 206 (591)
+++.++ ||++||||||++|++|+ +|+++++++..+| ++|||||||||||||||||+ +||||
T Consensus 55 ~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCch
Confidence 334444 99999999999999997 4677777666666 48999999999999999999 59999
Q ss_pred chhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCC
Q 007754 207 PVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFAN 286 (591)
Q Consensus 207 ~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~ 286 (591)
|+||++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||++
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~a 172 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQ 172 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCT
T ss_pred hhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCC
Confidence 999999999999999 999999999765 45664 3433 566677777765 99999999
Q ss_pred ccHHHHHHHHcC--CCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhh
Q 007754 287 HNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEE 364 (591)
Q Consensus 287 ~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~ee 364 (591)
+|||++|+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 173 p~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~-- 245 (487)
T 3nv9_A 173 PNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP-- 245 (487)
T ss_dssp THHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG--
T ss_pred chHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc--
Confidence 999999999998 799999999999999999999999999999999999999999999999999975 49986
Q ss_pred hcCeEEEEcCCCcccCCCcCCC-----chhhhhhcccc--CCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcC
Q 007754 365 TRKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEH--EPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASF 436 (591)
Q Consensus 365 A~~~i~lvD~~GLv~~~r~~~l-----~~~k~~fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~ 436 (591)
++|||||++|||+++|.+ | .++|.+||++. ++..+|+|||+. +|||||+|++ +|+||+|+|++|+
T Consensus 246 --~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma-- 318 (487)
T 3nv9_A 246 --KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG-- 318 (487)
T ss_dssp --GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC--
T ss_pred --ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc--
Confidence 899999999999999954 6 34677888864 256799999998 7999999976 7999999999996
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHH
Q 007754 437 NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDML 516 (591)
Q Consensus 437 ~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~ 516 (591)
+||||||||||| +|||||||++ +|+||||||| +++|||+||+|+|||||+|+++++|++|||+|+
T Consensus 319 -~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~ 383 (487)
T 3nv9_A 319 -EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMA 383 (487)
T ss_dssp -SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHH
T ss_pred -CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHH
Confidence 899999999999 7999999998 6999999994 678999999999999999999999999999999
Q ss_pred HHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007754 517 LAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCM 582 (591)
Q Consensus 517 ~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~-~~~~d~~~~i~~~~ 582 (591)
++||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 384 ~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 384 IAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999 689999999999999999999876 67889999998765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=5.8e-113 Score=903.86 Aligned_cols=362 Identities=29% Similarity=0.422 Sum_probs=333.1
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007754 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (591)
Q Consensus 121 ~LFy~ll~~~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (591)
.+++++.+++.++ |||+||||||++|++|++ |+++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~~-------------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKHD-LSIAYTPGVASVSSAIAK-------------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHHH-HHHHSTTTTHHHHHHHHH-------------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHHH-CeEEECchHHHHHHHHHh-------------CHHHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 4566666777554 899999999999999873 445554 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 007754 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (591)
Q Consensus 201 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (591)
++ ||+||+||++||++||||| |+|||||+|| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCccHHHHHHHHcCC--CeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 279 IQFEDFANHNAFELLAKYGTT--HLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
||||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999974 999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH
Q 007754 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M 433 (591)
|. ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|+|||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 74 899999999999999933599999999987432 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCH
Q 007754 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 513 (591)
Q Consensus 434 a~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd 513 (591)
+ ++|||||||||| +||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 8 899999999999 89999999999 99999999 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcC
Q 007754 514 DMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELG 563 (591)
Q Consensus 514 ~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G 563 (591)
+|+++||++||++++++++.++.|||++++ |+||.+||.||+++|++..
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~~ 391 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKSE 391 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC---
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999 9999999999999998653
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=2e-107 Score=860.33 Aligned_cols=354 Identities=31% Similarity=0.445 Sum_probs=331.9
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007754 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (591)
Q Consensus 121 ~LFy~ll~~~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (591)
..++++.+++.++ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 5678888888877 89999999999999987 5555444 7999999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 007754 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (591)
Q Consensus 201 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (591)
++ ||+||+||+.||++||||| ++|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 97 9999999999999999999 9999999996 699999999999 88 89
Q ss_pred eeeecCCCccHHHHHHHHcC--CCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
||||||+++|||++|+|||+ ++|||||||||||+|++||+++|+|++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCcCC-CchhhhhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH
Q 007754 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~r~~~-l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~ 432 (591)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999987432 4689999998 899999999 79999999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccC
Q 007754 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 512 (591)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~It 512 (591)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 99999999999 99999999 689999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHH
Q 007754 513 DDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 559 (591)
Q Consensus 513 d~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A 559 (591)
|+|+++||++||+++ ++.++.|||++++ |+||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 6788999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=4e-86 Score=709.02 Aligned_cols=385 Identities=30% Similarity=0.434 Sum_probs=349.0
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007754 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (591)
Q Consensus 121 ~LFy~ll~~~~~e~lPivYTPtVg~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (591)
..++++.+++.++ |||+||||||++|++|++ |++++++ |+.++++|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESREE-LTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHHH-HHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHHH-CeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 3456667777665 899999999999999983 6777774 899999999999999999999999
Q ss_pred CC-ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCC-ee
Q 007754 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (591)
Q Consensus 201 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 278 (591)
.+ ++|+++||++||++||||| ++|++||+.. .|+|+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~d---------------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQE---------------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCS---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecCC---------------------------HHHHHHHHHHhC-ccCcE
Confidence 97 8999999999999999999 9999999921 478888888766 55 67
Q ss_pred eeeecCCCccHHHHHHHHcC--CCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
||||||+.||||++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|...
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999986 6999999999999999999999999999999999999999999999999999863
Q ss_pred hcCCChhhhcCeEEEEc----CCCcccCCCcCC---CchhhhhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCC
Q 007754 357 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 425 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD----~~GLv~~~r~~~---l~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~F 425 (591)
|+++ ++||++| ++||++++ +. |.++|++|++... ...+|.|+++. +|+|||+|+.+ |+|
T Consensus 209 --G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 8753 7899999 99999887 24 7788888887532 24689999986 89999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHH
Q 007754 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 505 (591)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~ 505 (591)
++++++.|+ ++||||+||||+ +||++++|.+| |.+++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999886 899999999999 89999999998 89999999 58999999999999999999999
Q ss_pred hCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccC
Q 007754 506 SGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTP 585 (591)
Q Consensus 506 s~a~~Itd~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~d~~~~i~~~~~~P 585 (591)
++|++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.+|+++|+++|+|+..++|+|+.+|+++.||.+
T Consensus 342 ~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~ 418 (439)
T 2dvm_A 342 VRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFY 418 (439)
T ss_dssp TTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhh
Confidence 9999999999999999999999876 78999999999 99999999999999999999987777899999999999987
Q ss_pred CC
Q 007754 586 VY 587 (591)
Q Consensus 586 ~Y 587 (591)
.|
T Consensus 419 ~~ 420 (439)
T 2dvm_A 419 EN 420 (439)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.85 E-value=2.9e-08 Score=106.83 Aligned_cols=168 Identities=11% Similarity=0.185 Sum_probs=124.9
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHHHH---------------------HHHc-------CCCeee-
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 303 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL---------------------~ryr-------~~~~~F- 303 (591)
-+-|||...++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 4567888888876642 346677666 44443222221 3443 269999
Q ss_pred ---------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 304 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 304 ---------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.|++.||+-++++|+..+ ++..+.+.+++|+|+|..|.++|+.+... |. +++.+|.
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 899999999999999754 79999999999999999999999988643 64 5888876
Q ss_pred CCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 007754 375 KGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 453 (591)
Q Consensus 375 ~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE 453 (591)
+. .+...|. +.-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp------------~ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DP------------ICALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Ch------------hhhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 42 1111222 11123579999986 99999999888999999999996 678999999997 88
Q ss_pred CCHHHH
Q 007754 454 CTAEEA 459 (591)
Q Consensus 454 ct~edA 459 (591)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.78 E-value=1.9e-08 Score=108.34 Aligned_cols=130 Identities=17% Similarity=0.198 Sum_probs=105.4
Q ss_pred CCCeee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007754 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (591)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (591)
..+|+| .|++.||+-+++.|++ +.++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 589999 8899999999999996 4579999999999999999999999988653 63
Q ss_pred eEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 368 ~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+++++|++. .+...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 688888731 1211121 11123589999986 99999988888999999999996 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 007754 447 NPTSQSECTAEEAYT 461 (591)
Q Consensus 447 NPt~~aEct~edA~~ 461 (591)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.20 E-value=2.3e-06 Score=90.64 Aligned_cols=219 Identities=18% Similarity=0.238 Sum_probs=127.8
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--ccccchhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCc
Q 007754 166 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 243 (591)
Q Consensus 166 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnne~LL~Dp 243 (591)
++..++++.++ ..+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 34555655554 4589999999999999998865 7888877 56665 2 4677654311
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCC-CccHHHHHHHHcCCCeeec-cCCC----------chh
Q 007754 244 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDIQ----------GTA 311 (591)
Q Consensus 244 ~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~-~~~Af~lL~ryr~~~~~FN-DDiQ----------GTa 311 (591)
.+.++.+++ ...+|.|=..+ ++..++.|.+ ..+.+|+ +.+. .+.
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHH
Confidence 233333322 11223222222 2333332222 4666663 2222 355
Q ss_pred HHHHHHHHHHHHHh----CC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 312 SVVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 312 aV~LAgll~A~r~~----g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
...+|| .+|++.. ++ .+.+.+|+|+|+|.+|.++++.+.. .|. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCHH
Confidence 555665 3343332 22 2568999999999999999987754 262 5888988643
Q ss_pred ccCCCcCCCch------------hhhhhccccCC------CCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHHH
Q 007754 378 IVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMA 434 (591)
Q Consensus 378 v~~~r~~~l~~------------~k~~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma 434 (591)
..... ..+.. .+..|++...+ ..+|.+.++. .|++|++...+ .+++++.++.|.
T Consensus 207 ~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 21100 00100 00011111000 0147777875 89999996443 679999999996
Q ss_pred cCCCCcEEEEcCCCC
Q 007754 435 SFNEKPLILALSNPT 449 (591)
Q Consensus 435 ~~~erPIIFaLSNPt 449 (591)
+..+|+-+|+|.
T Consensus 284 ---~g~vIVdva~~~ 295 (401)
T 1x13_A 284 ---AGSVIVDLAAQN 295 (401)
T ss_dssp ---TTCEEEETTGGG
T ss_pred ---CCcEEEEEcCCC
Confidence 678999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.83 E-value=9.1e-05 Score=80.30 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=97.7
Q ss_pred CCCeee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007754 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (591)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (591)
-.+|+| .|...||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 5677899999888885 6779999999999999999999999987642 64
Q ss_pred eEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 368 ~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+++.+|.+. .....|. +.-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp------------~~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDP------------ICALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSH------------HHHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCc------------chhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 688777531 1111111 11123579999986 99999998888999999999996 778888888
Q ss_pred CCCCCCCCCHHHH
Q 007754 447 NPTSQSECTAEEA 459 (591)
Q Consensus 447 NPt~~aEct~edA 459 (591)
+.. .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 66665444
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.71 E-value=0.0001 Score=80.56 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=100.2
Q ss_pred CCCeee----------ccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007754 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (591)
Q Consensus 298 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~ 367 (591)
-.+|+| .|+.+||+-.++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 479999 6889999999999886 789999999999999999888888887764 363
Q ss_pred eEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 368 ~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
+++++|++.. + ... .+...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~----Aa~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQ----ATMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHH----HHHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHH----HHHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888877421 0 101 11111123467777765 89999998888999999998885 6889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 007754 448 PTSQSECTAEEAYTW 462 (591)
Q Consensus 448 Pt~~aEct~edA~~w 462 (591)
+. .|.+.++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.07 E-value=0.0021 Score=67.17 Aligned_cols=224 Identities=15% Similarity=0.155 Sum_probs=118.6
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--ccccchhhHHHHHHhcCCCCCceeeEEeecCCC-----chhc
Q 007754 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (591)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----ne~L 239 (591)
+..+.++.+. ..+|+|.++++.-.|+.|.... |..|..++-.++ ++.| |+|.+.+- +++.
T Consensus 20 P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 3455555553 5789999999999999997754 777777766655 3444 66665432 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCc-cHHHHHHHHcCCCeeeccCCCchhHHH
Q 007754 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANH-NAFELLAKYGTTHLVFNDDIQGTASVV 314 (591)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~-~Af~lL~ryr~~~~~FNDDiQGTaaV~ 314 (591)
+ ..-.+++.-+.-. +. +.++++.+ -|- .++.+|-.... .+. .+++|+ ....
T Consensus 87 i~~l~~~~~~i~~~~~~~-----~~---~~~~~~~~-~gi-~~~~~e~~~~~~~~~--------~l~~l~------~~a~ 142 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGALT-----NR---PVVEALTK-RKI-TAYAMELMPRISRAQ--------SMDILS------SQSN 142 (384)
T ss_dssp GGGSCTTCEEEEECCGGG-----CH---HHHHHHHH-TTC-EEEEGGGCCCSGGGG--------GGCHHH------HHHH
T ss_pred HHhhccCCEEEEEecccC-----CH---HHHHHHHH-CCC-EEEEecccccccccc--------ccchhh------HHHH
Confidence 1 1122233322211 10 11222222 111 12222222110 000 111111 1112
Q ss_pred HH---HHHHHHHHhCC----------CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCC
Q 007754 315 LA---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS 381 (591)
Q Consensus 315 LA---gll~A~r~~g~----------~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~ 381 (591)
+| +++.+.+..++ .+...+++|+|+|.+|.+++..+.. .|. +++++|++.-
T Consensus 143 ~ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~---- 206 (384)
T 1l7d_A 143 LAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA---- 206 (384)
T ss_dssp HHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----
T ss_pred HHHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----
Confidence 23 45556665453 6789999999999999999887654 263 4889997532
Q ss_pred CcCCCchh-----------------hhhhccccC------CCCCHHHHhcccCCcEEEecc---C--CCCCCCHHHHHHH
Q 007754 382 RKDSLQHF-----------------KKPWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAM 433 (591)
Q Consensus 382 r~~~l~~~-----------------k~~fA~~~~------~~~~L~e~V~~vkPtvLIG~S---~--~~g~Ft~evv~~M 433 (591)
|.+.+... +-.|++... ....|.+.++. .|++|.++ + .+.+++++.++.|
T Consensus 207 ~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~m 284 (384)
T 1l7d_A 207 TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKM 284 (384)
T ss_dssp THHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTS
T ss_pred HHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 10000000 001111100 00127777764 99999988 3 2357899999999
Q ss_pred HcCCCCcEEEEcCCC
Q 007754 434 ASFNEKPLILALSNP 448 (591)
Q Consensus 434 a~~~erPIIFaLSNP 448 (591)
. +..+|+-+|-+
T Consensus 285 k---~g~vivdva~~ 296 (384)
T 1l7d_A 285 K---PGSVIIDLAVE 296 (384)
T ss_dssp C---TTCEEEETTGG
T ss_pred C---CCCEEEEEecC
Confidence 5 67789988864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.92 E-value=0.00094 Score=71.39 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=71.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC------CCc-------hhhhhhc
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ-------HFKKPWA 394 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~------~l~-------~~k~~fA 394 (591)
.+...|++|+|+|.+|..+|+.+... |. +++++|++.-..+...+ .+. .-+..|+
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya 254 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYA 254 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHHTTCEECCCCC-------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchh
Confidence 46789999999999999999987643 63 68899987532111000 000 0011244
Q ss_pred cccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 007754 395 HEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 455 (591)
Q Consensus 395 ~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct 455 (591)
+...+ ..+|.|+++. .|++|++... +.+||+++++.|. +..+|+-+|- |-...|+|
T Consensus 255 ~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 255 KEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp ----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 32111 2378999986 9999998533 4589999999996 7899999995 33445655
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.60 E-value=0.036 Score=59.67 Aligned_cols=178 Identities=19% Similarity=0.185 Sum_probs=126.5
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHH-H-HHHHHc---CC--Ceee----------ccCCCchhHHHH
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF-E-LLAKYG---TT--HLVF----------NDDIQGTASVVL 315 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af-~-lL~ryr---~~--~~~F----------NDDiQGTaaV~L 315 (591)
.+..|-..|...|+.++.+.-||+.-|-=+|++..-.. . +.+.|+ .. -.++ .+--.-||--+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 45567778899999999999999888888999864222 2 445663 21 1122 233455888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh-hhhc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k-~~fA 394 (591)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 89999999999999999999999999999999988653 63 4567999999999764 344321 1222
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 395 ~~~~-------~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
.... ..-+-.+ +-.++.||||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 345789999987774 79999988876 5688888888 65
No 16
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.52 E-value=0.0034 Score=66.64 Aligned_cols=104 Identities=22% Similarity=0.201 Sum_probs=67.0
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC------CCc---hhhhhhccc---
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD------SLQ---HFKKPWAHE--- 396 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~------~l~---~~k~~fA~~--- 396 (591)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-..+.-.+ .++ .-...|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~ 249 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSE 249 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHHHHTTCEECCCC-------------CH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhH
Confidence 5789999999999999999988653 63 58899986421100000 000 000112211
Q ss_pred ---cCCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 397 ---HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 397 ---~~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 250 ~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 250 AERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp HHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred HHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 0012368889876 9999997533 3579999999996 688999998654
No 17
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.41 E-value=0.16 Score=54.98 Aligned_cols=183 Identities=15% Similarity=0.104 Sum_probs=125.7
Q ss_pred CCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccH-----HHHHHHHcCC-Ceee----------ccCCCchhHHHH
Q 007754 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVL 315 (591)
Q Consensus 252 R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A-----f~lL~ryr~~-~~~F----------NDDiQGTaaV~L 315 (591)
..+..|-..|...||..+.+..||+.=|--.|++..-- +...++++.. -.|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 35667788899999999999999999999999975432 2233344332 2333 233344888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
-++-.+++..|.+|++.||+|=|.|..|...|+.|.+. |. +=+-+-|++|-|++.. .|+..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999988753 63 5566788999888653 35443221110
Q ss_pred c--cCCCCCHH-------------HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 396 E--HEPVNNLL-------------DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 396 ~--~~~~~~L~-------------e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
+ ......+. +-+-.++.|||+=+.. ++..|++-++.+.+. .-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0 00001111 1133468999998877 469999999998642 2357777777 55
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.41 E-value=0.027 Score=60.45 Aligned_cols=186 Identities=15% Similarity=0.136 Sum_probs=127.0
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHH--HHHHHHc---CC--Ceee----------ccCCCchhHHHH
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVF----------NDDIQGTASVVL 315 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~--~~~F----------NDDiQGTaaV~L 315 (591)
.+..|-..|...|+.++.+.-||..-|-=+|++..-.. -+.+.|+ .. -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 34566778899999999999999999999999875321 1455662 11 1222 223345777777
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcCCCcccCCCcCCCchhhh-hh
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PW 393 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~r~~~l~~~k~-~f 393 (591)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+ .|. +++ +.|++|-|++..+ |+..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 7888889999999999999999999999999998865 263 555 9999999987643 433211 11
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 007754 394 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (591)
Q Consensus 394 A~~~~~~~----~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct~edA~~ 461 (591)
........ +-.+ +-.++.|||+=++. ++..|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111010 1112 34578999998775 679999988877 5679999998 653 33 344443
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.35 E-value=0.024 Score=56.83 Aligned_cols=121 Identities=16% Similarity=0.191 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh
Q 007754 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (591)
Q Consensus 310 TaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~ 389 (591)
+-+|+=.++..++...+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.. .+ +...
T Consensus 134 ~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~~ 194 (293)
T 3d4o_A 134 SIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LARI 194 (293)
T ss_dssp HHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHH
T ss_pred cHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHHH
Confidence 44555555555666778899999999999999999999987542 63 688888741 10 1111
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCCCCCCHHHH
Q 007754 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQSECTAEEA 459 (591)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~aEct~edA 459 (591)
+ .+--..-...+|.+.++. .|++|-.. ..+.++++.++.|. +..+|+=+| +|. ++..+.+
T Consensus 195 ~-~~g~~~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 195 A-EMGMEPFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp H-HTTSEEEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred H-HCCCeecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 1 110000012368788865 99999765 45799999998885 567888888 443 3445444
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.87 E-value=0.018 Score=59.45 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=77.1
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc
Q 007754 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (591)
Q Consensus 309 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~ 387 (591)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | .++++++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 34457788899999999999999999999999 5799999888652 4 358888643
Q ss_pred hhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
..+|.+.++. .|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 2468899986 99999999999999999875 45577666654
No 21
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.86 E-value=0.43 Score=51.84 Aligned_cols=190 Identities=16% Similarity=0.176 Sum_probs=129.3
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH--HHHHHc---CCCe-ee----------ccCCCchhHHHHH
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE--LLAKYG---TTHL-VF----------NDDIQGTASVVLA 316 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~~~-~F----------NDDiQGTaaV~LA 316 (591)
.+..|...|-..||..+.+.+||..=|-=+|++..-... +.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 356677888888999998888999989999998643221 445554 2221 11 1122347777778
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhh----
Q 007754 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 392 (591)
Q Consensus 317 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~---- 392 (591)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 8888899999999999999999999999999988764 63 3445889999888754 35432211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHH
Q 007754 393 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 458 (591)
Q Consensus 393 -----------fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct~ed 458 (591)
|+...+... +- +-+-.++.||||=+.. ++..|++-++.+-+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001100 11 1233568999998777 67999999999843 25689999998 653 44 556
Q ss_pred Hhc
Q 007754 459 AYT 461 (591)
Q Consensus 459 A~~ 461 (591)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 22
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.70 E-value=0.02 Score=57.85 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA 394 (591)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999777777666654 375 689988774 111 112222221
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 007754 395 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 422 (591)
Q Consensus 395 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (591)
.. .-+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888876 89999877654
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.67 E-value=0.027 Score=57.71 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh
Q 007754 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (591)
Q Consensus 311 aaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~ 389 (591)
.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788899999999999999999999976 899999988652 53 47777542
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007754 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (591)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (591)
..+|.+.++. +|++|...+.++.++.++|+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368889986 99999999999999998874
No 24
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.52 E-value=0.19 Score=54.31 Aligned_cols=179 Identities=17% Similarity=0.149 Sum_probs=121.9
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH---HHHHHc---CC--Ceee----------ccCCCchhHHH
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVF----------NDDIQGTASVV 314 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~--~~~F----------NDDiQGTaaV~ 314 (591)
.+..|-..|...|+.++.+.-||..-|-=+|++.. ..+ +.+.|+ .. -.++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 34566778899999999999999988989999874 322 455663 11 1222 23334577777
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCC---Cchhhh
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS---LQHFKK 391 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~---l~~~k~ 391 (591)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++..+=+ |..++.
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 778888899999999999999999999999999988653 53 3344999999998765311 122222
Q ss_pred hhcc--ccC--CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 392 PWAH--EHE--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 392 ~fA~--~~~--~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
.+-. +-+ ..-+-.+ +-.++.||||=++. ++..|.+-++.+ .-.+|.--+| |+
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 2110 000 0012334 44678999997766 568888887776 5678888888 65
No 25
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.48 E-value=0.23 Score=53.37 Aligned_cols=179 Identities=14% Similarity=0.183 Sum_probs=112.3
Q ss_pred CChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHH--HHHHHHc---CCC---eee----------ccCCCchhHHH
Q 007754 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTH---LVF----------NDDIQGTASVV 314 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~~---~~F----------NDDiQGTaaV~ 314 (591)
.+..|-..|...|+.++.+.-||..-|-=+|++..-.. -+.+.|+ ... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 34556778899999999999999999999999975221 2455664 221 222 22223477777
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC-----CcccCCCcCCCchh
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHF 389 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~-----GLv~~~r~~~l~~~ 389 (591)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++..+ |+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 77888889999999999999999999999999998865 363 334489999 99997643 4322
Q ss_pred hh-hhccccCCC------CCH-HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 390 KK-PWAHEHEPV------NNL-LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 390 k~-~fA~~~~~~------~~L-~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
.. .+......+ ..+ .+.+-.++.||||=++. ++..|++-.+.+ ...+|.-=+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 11 111111110 000 01233457788886654 567777777666 4566666666 54
No 26
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.38 E-value=0.074 Score=53.04 Aligned_cols=98 Identities=16% Similarity=0.256 Sum_probs=65.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
..||.|+|+|..|.++|..+... |.. ..+++++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988653 653 2478888874 1 1122222222 11112578888875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCCCC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTS 450 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~ 450 (591)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 78877 44444 4568888888764 56668888888774
No 27
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.31 E-value=0.044 Score=56.16 Aligned_cols=92 Identities=16% Similarity=0.260 Sum_probs=73.7
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch
Q 007754 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (591)
Q Consensus 310 TaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~ 388 (591)
-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+++++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34578888999999999999999999999876 899999988652 52 47777652
Q ss_pred hhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 007754 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (591)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (591)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDV 231 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDV 231 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEe
Confidence 1368888986 99999999999999998884 44555555
No 28
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.22 E-value=0.042 Score=56.06 Aligned_cols=82 Identities=11% Similarity=0.233 Sum_probs=67.1
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch
Q 007754 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (591)
Q Consensus 310 TaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~ 388 (591)
-.-+|-.|++..++..+ |++.++|++|+|. .|..+|.++... |. .+++++++
T Consensus 131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------- 183 (276)
T 3ngx_A 131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------- 183 (276)
T ss_dssp SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577889999999998 9999999999984 899999988652 52 57777652
Q ss_pred hhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007754 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (591)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (591)
..+|.+.++. .|++|...+.++.+++++++
T Consensus 184 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 213 (276)
T 3ngx_A 184 -----------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT 213 (276)
T ss_dssp -----------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC
T ss_pred -----------cccHHHhhcc--CCEEEECCCCCccccHhhcc
Confidence 1468899987 99999999999999988763
No 29
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.14 E-value=0.039 Score=56.66 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=75.4
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc
Q 007754 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (591)
Q Consensus 309 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~ 387 (591)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445677888999999999999999999999995 699998887642 4 467877642
Q ss_pred hhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
..+|.+.++. .|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999998874 44455555543
No 30
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.01 E-value=0.055 Score=55.44 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh
Q 007754 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (591)
Q Consensus 311 aaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~ 389 (591)
.-+|-.|++..++..+.++++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788999999999999999999999875 899999988652 42 56777542
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEc-CCCC
Q 007754 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 449 (591)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL-SNPt 449 (591)
..+|.+.++. +|++|+..+.++.++.++|+ +.-+|+=+ +||.
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368888986 99999999999999998884 44455555 3553
No 31
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.93 E-value=0.36 Score=52.59 Aligned_cols=179 Identities=15% Similarity=0.165 Sum_probs=120.8
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHH--HHHHHHc---CC-Ceee----------ccCCCchhHHHHHH
Q 007754 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT-HLVF----------NDDIQGTASVVLAG 317 (591)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~-~~~F----------NDDiQGTaaV~LAg 317 (591)
+..|-..|-..||..+.+..||..=|-=+|++..-.. -+.+.|+ .. ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 4556677888899999988899988889999874221 1445554 21 1111 11223477777778
Q ss_pred HHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE-EEcCCCcccCCCcCCCchh-------
Q 007754 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 389 (591)
Q Consensus 318 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~r~~~l~~~------- 389 (591)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 888899999999999999999999999999988653 63 444 888888887653 34222
Q ss_pred -h-------hhhccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 390 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 390 -k-------~~fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
| ..|+...+... +-.+.. .++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 12221000000 001222 568999998775 67999999999854 45679998898 55
No 32
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.92 E-value=0.041 Score=57.15 Aligned_cols=113 Identities=19% Similarity=0.256 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHH---------hCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCC
Q 007754 313 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (591)
Q Consensus 313 V~LAgll~A~r~---------~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r 382 (591)
+|-.|.+-.++. .|.+++..++|++|+|. .|.-+|.++... | .+++++|+...-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999995 598888887542 4 3588999876555555
Q ss_pred cCCCchhhhhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 383 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 383 ~~~l~~~k~~fA~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.+.+.. .+|.... . .+|.+.++. .|++|+..+.++. +|.++|+ +.-+|+-++-|-
T Consensus 218 a~~la~----~~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKL----NKHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSC----CCCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhh----hcccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 433331 0121100 1 469999998 9999999999887 8988874 334555555553
No 33
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=94.88 E-value=0.03 Score=56.68 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA 394 (591)
-.|++.+++..+.++++.+++|+|||.+|.+|+..|.. .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 34677888888999999999999999888888776654 365 678888875 222222221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCC
Q 007754 395 HEHEPVNNLLDAVKVIKPTILIGSSGVG 422 (591)
Q Consensus 395 ~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (591)
. ....++.++++. .|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112345566665 89999776644
No 34
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.71 E-value=0.016 Score=51.56 Aligned_cols=71 Identities=15% Similarity=0.315 Sum_probs=43.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
+.+|+|+|+|..|..++..+.. .|. + ++++|+. .++ .....+.|.-+.....++.++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~~a~~~~~~~~~~~~~~~~~~~- 80 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRAFAEKYEYEYVLINDIDSLIKN- 80 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHHHHHHHTCEEEECSCHHHHHHT-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHHHHHHhCCceEeecCHHHHhcC-
Confidence 7899999999999888776543 242 4 8888873 111 222222221111234578888875
Q ss_pred CCcEEEeccCCC
Q 007754 411 KPTILIGSSGVG 422 (591)
Q Consensus 411 kPtvLIG~S~~~ 422 (591)
.|++|=+++.+
T Consensus 81 -~Divi~at~~~ 91 (144)
T 3oj0_A 81 -NDVIITATSSK 91 (144)
T ss_dssp -CSEEEECSCCS
T ss_pred -CCEEEEeCCCC
Confidence 78888665543
No 35
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.70 E-value=0.062 Score=55.42 Aligned_cols=95 Identities=24% Similarity=0.326 Sum_probs=73.8
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCC
Q 007754 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 386 (591)
Q Consensus 308 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l 386 (591)
.|-.-+|-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+++++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3444677888999999999999999999999876 899999988752 52 57888762 1
Q ss_pred chhhhhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 387 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 387 ~~~k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.+|. +.++. .|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1344 88886 99999999999999998874 445665543
No 36
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.69 E-value=0.29 Score=52.60 Aligned_cols=178 Identities=19% Similarity=0.188 Sum_probs=117.4
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH---HHHHHc---CC--CeeeccCC----------CchhHHHH
Q 007754 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVFNDDI----------QGTASVVL 315 (591)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~--~~~FNDDi----------QGTaaV~L 315 (591)
+.+|-..|...|+.++.+.-||..-|-=+|++.. +.+ +.+.|+ +. ..++.-+- .-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456778899999999999999999999999973 222 335552 11 12232221 23666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch---hhhh
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKP 392 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~---~k~~ 392 (591)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++|-|++..+=+++. ++..
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga------kVVavsD~~G~i~dp~GlD~~~l~~~k~~ 263 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA------KVIAVSDINGVAYRKEGLNVELIQKNKGL 263 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------EEEEEECSSCEEECTTCCCTHHHHHTTTS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEECCCcEEECCCCCCHHHHHHHHHh
Confidence 6777888889999999999999999999999987754 353 3344899999998764211221 2111
Q ss_pred --------hcccc--CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 393 --------WAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 393 --------fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
|.... ....+-.| +-.++.|+|+=+.. ++..|++-++.+ .-.||.--+| |+
T Consensus 264 ~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 264 TGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp CHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 11000 11101123 34578899997664 678888777766 5678888888 55
No 37
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.69 E-value=0.061 Score=53.42 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=56.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhh-------hccc--------
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 396 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~-------fA~~-------- 396 (591)
.||.|+|+|..|.+||..+..+ |. +++++|++- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999988753 64 688888741 1 12111111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 007754 397 -------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQ 451 (591)
Q Consensus 397 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (591)
.....++.|+++. .|++|=. .... ...+++++.+.+....-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~a-v~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEA-VPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEe-ccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123578888876 8988833 2221 14566677776655444444 3454443
No 38
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.60 E-value=0.16 Score=53.38 Aligned_cols=167 Identities=18% Similarity=0.199 Sum_probs=107.1
Q ss_pred hhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH---HHHHHcC---CCeee---ccCCCchhHHHHHHHHHHHHHh
Q 007754 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLI 325 (591)
Q Consensus 255 g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~~~~F---NDDiQGTaaV~LAgll~A~r~~ 325 (591)
..+-++++..|.+++.+..|+ -|-=+|++.. ..+ +.+.|+- +-..+ .|--.-||-=+.-++-.+++..
T Consensus 92 ~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 92 PSTWARILRIHAENIDKLSGN--YWTGPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTTS--EEEEECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHhcCC--cccCCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 345567788888888887765 4678899763 333 4556651 11111 1111136666667778888889
Q ss_pred CC-CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHH
Q 007754 326 GG-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (591)
Q Consensus 326 g~-~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~ 404 (591)
|. .|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| .++.+.|- .+ .-++.
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~----~~~a~~~g--a~-~v~~~ 225 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER----VAHAVALG--HT-AVALE 225 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH----HHHHHHTT--CE-ECCGG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH----HHHHHhcC--CE-EeChH
Confidence 98 8999999999999999999987754 363 67788864 111 11222221 11 11344
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCC
Q 007754 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSE 453 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aE 453 (591)
+..+ ++.|+|+=+ +.++.++++-++.|. -.+|.--+| |+...|
T Consensus 226 ell~-~~~DIliP~-A~~~~I~~~~~~~lk----~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 226 DVLS-TPCDVFAPC-AMGGVITTEVARTLD----CSVVAGAANNVIADEA 269 (355)
T ss_dssp GGGG-CCCSEEEEC-SCSCCBCHHHHHHCC----CSEECCSCTTCBCSHH
T ss_pred Hhhc-CccceecHh-HHHhhcCHHHHhhCC----CCEEEECCCCCCCCHH
Confidence 4443 578999954 457799999999983 468888887 653334
No 39
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.59 E-value=0.16 Score=55.41 Aligned_cols=123 Identities=15% Similarity=0.183 Sum_probs=87.0
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCC
Q 007754 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (591)
Q Consensus 306 DiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~ 385 (591)
.+.|+......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++..
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~-------- 291 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI-------- 291 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH--------
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh--------
Confidence 3444545555662 25678899999999999999999999988653 63 6888887521
Q ss_pred CchhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 007754 386 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (591)
Q Consensus 386 l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 461 (591)
... ..+...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 292 --~~~-~a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 292 --CAI-QAVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp --HHH-HHHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred --hHH-HHHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 000 011111112479999986 99999998888899999999885 567888777754 6667776665
No 40
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.39 E-value=0.25 Score=51.98 Aligned_cols=102 Identities=16% Similarity=0.323 Sum_probs=62.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999988877643 64 689988873 111 1111112211111224677777
Q ss_pred cccCCcEEEeccCCC-CCCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 007754 408 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 449 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 449 (591)
. +.|++|=+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~--~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 A--RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp H--TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred c--CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 6 489999876654 3567788887 43 222344555666553
No 41
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.35 E-value=0.042 Score=55.57 Aligned_cols=87 Identities=23% Similarity=0.273 Sum_probs=56.3
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc
Q 007754 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (591)
Q Consensus 316 Agll~A~r~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA 394 (591)
.|++.+++..+ .+++..+++|+|||.+|..+|..|.. .|. ++++++|+. .+| .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 679988874 111 112212221
Q ss_pred cccCCC---CCHHHHhcccCCcEEEeccCCC
Q 007754 395 HEHEPV---NNLLDAVKVIKPTILIGSSGVG 422 (591)
Q Consensus 395 ~~~~~~---~~L~e~V~~vkPtvLIG~S~~~ 422 (591)
...... .++.++++. .|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 100011 245566654 89999887755
No 42
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.24 E-value=0.079 Score=55.69 Aligned_cols=159 Identities=15% Similarity=0.116 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHhhCCCeeeeeecCCCccHHHHHHHHcCCC-eeeccC------C---CchhHHHHHHHHHHHHHh-CC
Q 007754 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD------I---QGTASVVLAGVVAALKLI-GG 327 (591)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~-~~FNDD------i---QGTaaV~LAgll~A~r~~-g~ 327 (591)
++++..|.+++.+..|+ -|-=+|++..- . .+...-+++ ++---- + .-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~-~-~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV-D-DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH-H-HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH-H-HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677777788887775 46678887543 2 333333333 211111 0 235555555666666664 76
Q ss_pred -CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 328 -~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ + +.+..+...|- . ..-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g--a-~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG--A-DAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC--C-EECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC--C-EEEChHHH
Confidence 89999999999999999999988653 63 57788852 1 11333333321 1 11133333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
. ..+.|++|=+ +..+.++++.++.| .-.+|.--+| |+
T Consensus 227 l-~~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 3 2578999955 45668999888887 3467776666 54
No 43
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.24 E-value=1 Score=48.24 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=118.8
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccH--HHHHHHHc---CC--Ceeecc----------CCCchhHHHHH
Q 007754 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TT--HLVFND----------DIQGTASVVLA 316 (591)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A--f~lL~ryr---~~--~~~FND----------DiQGTaaV~LA 316 (591)
+.+|-..|...|+.++.+.-||..-|-=+|++..-. --+.+.|+ .. ..++-- --.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 445667889999999999989998888999987521 11344552 21 123322 22346666677
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh-hhhcc
Q 007754 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 395 (591)
Q Consensus 317 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k-~~fA~ 395 (591)
++-.+++..|.++++.||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++..+ |+... +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHH
Confidence 778889999999999999999999999999988865 0253 33448999999887643 43321 11111
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 396 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 396 ~~~~~--------~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
....+ -+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11100 12233 45678999997766 568888887766 4568887777 55
No 44
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.00 E-value=0.25 Score=49.49 Aligned_cols=110 Identities=21% Similarity=0.207 Sum_probs=71.8
Q ss_pred HHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCC
Q 007754 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (591)
Q Consensus 322 ~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~ 401 (591)
++..+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 34567899999999999999999999987642 53 688888741 11 11111100010 0124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHH
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEA 459 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA 459 (591)
+|.|.++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 999997665 4799999887774 567888888632 33445443
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=93.80 E-value=1.3 Score=47.94 Aligned_cols=179 Identities=17% Similarity=0.189 Sum_probs=118.6
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH--HHHHHc---CC--Ceeecc----------CCCchhHHHHH
Q 007754 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE--LLAKYG---TT--HLVFND----------DIQGTASVVLA 316 (591)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~--~~~FND----------DiQGTaaV~LA 316 (591)
+..|-..|-..||..+.+..||..-|-=+|++..-... +.+.|+ +. .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 34567777888999998889999999999998762211 233443 22 122211 22346666667
Q ss_pred HHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCC-chh------
Q 007754 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------ 389 (591)
Q Consensus 317 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l-~~~------ 389 (591)
++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 7788889999999999999999999999999888653 53 3344788888888753 24 221
Q ss_pred --h-------hhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 390 --K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 390 --k-------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
+ ..|+.. .+.. +-.+. -.++.|+|+=+.. ++..|++-.+.+.+ |...+|.-=+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i-~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFF-PGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEE-ETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEe-Cchhh-hcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 0000 00112 2568999997774 67999999999864 34578888888 65
No 46
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.71 E-value=0.14 Score=52.45 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=74.6
Q ss_pred chhHHHHHHHHHHHHHhCCCcccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc
Q 007754 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (591)
Q Consensus 309 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~ 387 (591)
+-.-+|-.|++-.++..+.+++..++|++|+|. .|.-+|.++.. .|. -..+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 444567778899999999999999999999996 58888877743 210 1457777532
Q ss_pred hhhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 388 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
..+|.+.++. .|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899986 99999999999999999874 34577766655
No 47
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.69 E-value=0.15 Score=51.31 Aligned_cols=102 Identities=14% Similarity=0.195 Sum_probs=61.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch---hhhhhcc-ccCC-CCCHHHH
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 406 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~---~k~~fA~-~~~~-~~~L~e~ 406 (591)
.||.|+|||+.|..+|..|+.. |+ ...++++|++- ++-+.+.. +...+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11110110 0001110 0000 1356 66
Q ss_pred hcccCCcEEEeccCC-------CCCC-----------CHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 407 VKVIKPTILIGSSGV-------GRTF-----------TKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 407 V~~vkPtvLIG~S~~-------~g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
++. .|++|=+... +|.. -+++++.|.+++...+|+-+|||-.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 764 8888754443 2211 1588888888888888888999984
No 48
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=93.61 E-value=0.086 Score=52.44 Aligned_cols=124 Identities=20% Similarity=0.306 Sum_probs=72.7
Q ss_pred HHHHHHHHHHhhC--------CCeeeeeecCCCccHHHHHHHHcCCC---eeeccCCCchhHHHHHHHHHHHHHhCCCcc
Q 007754 262 LDEFMSAVKQNYG--------EKVLIQFEDFANHNAFELLAKYGTTH---LVFNDDIQGTASVVLAGVVAALKLIGGTLA 330 (591)
Q Consensus 262 idefv~av~~~fG--------p~~lIqfEDf~~~~Af~lL~ryr~~~---~~FNDDiQGTaaV~LAgll~A~r~~g~~l~ 330 (591)
+++|++.++..|. ...++.+=|- ++.|..+= --|.+ .=+|-|- .|++.+++.. .++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iG--AvNTi~~~~G~NTD~--------~G~~~~l~~~--~~~ 108 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIK--AVNCVFRGKGYNTDW--------VGVVKSLEGV--EVK 108 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHT--CCCEEETTEEECCHH--------HHHHHHTTTC--CCC
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcC--cceEeecCEEEcchH--------HHHHHHHHhc--CCC
Confidence 4667776664442 2234555565 66666540 00111 3345552 3677777654 577
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
+ +++|+|||.+|.+|+..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 109 ~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~- 166 (253)
T 3u62_A 109 E-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK- 166 (253)
T ss_dssp S-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT-
T ss_pred C-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC-
Confidence 8 99999999999888887764 364 689999884 222112221 1110 123467787775
Q ss_pred CCcEEEeccCC
Q 007754 411 KPTILIGSSGV 421 (591)
Q Consensus 411 kPtvLIG~S~~ 421 (591)
.|++|-++..
T Consensus 167 -aDiVInatp~ 176 (253)
T 3u62_A 167 -AKSLFNTTSV 176 (253)
T ss_dssp -CSEEEECSST
T ss_pred -CCEEEECCCC
Confidence 8999976543
No 49
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.60 E-value=0.16 Score=52.07 Aligned_cols=195 Identities=15% Similarity=0.184 Sum_probs=100.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhh-------hccc-------
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 396 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~-------fA~~------- 396 (591)
-.||.|+|+|..|.+||..++.+ |. +++++|.+- +.++..+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~-------~~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP-------RQITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH-------HHHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999988753 64 588888741 111111100 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcE
Q 007754 397 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 467 (591)
Q Consensus 397 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Gra 467 (591)
.....++.|+++. .|++| .+.... .+.+++++.+.++...-.|++ ||=++ ..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0123578899886 78877 333222 245677777777665444554 44222 44555555443322
Q ss_pred EEecCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchhh
Q 007754 468 IFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKI 547 (591)
Q Consensus 468 ifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~v 547 (591)
=|.-+-||.|+.+.+ -+-|.| ...-+++. .+.++.+...+...-..-+.-.|.+ +
T Consensus 140 r~ig~Hp~~P~~~~~---------lveiv~----------g~~t~~e~-~~~~~~l~~~lGk~~v~v~~~~~Gf-----i 194 (319)
T 2dpo_A 140 QCIVAHPVNPPYYIP---------LVELVP----------HPETSPAT-VDRTHALMRKIGQSPVRVLKEIDGF-----V 194 (319)
T ss_dssp GEEEEEECSSTTTCC---------EEEEEE----------CTTCCHHH-HHHHHHHHHHTTCEEEECSSCCTTT-----T
T ss_pred CeEEeecCCchhhcc---------eEEEeC----------CCCCCHHH-HHHHHHHHHHcCCEEEEECCCcCCc-----h
Confidence 233344777763221 111222 23335554 4456666655543222111112222 3
Q ss_pred HHHHHHHHHHHH---HHcCCCCCCCCchhHHHHHHh
Q 007754 548 SANIAANVAAKA---YELGVATRLPRPQNLVKCAES 580 (591)
Q Consensus 548 s~~VA~aVa~~A---~~~G~a~~~~~~~d~~~~i~~ 580 (591)
..++..+....| .++|.++ ++++.+-++.
T Consensus 195 ~Nrll~a~~~EA~~l~~~g~~~----~~~id~a~~~ 226 (319)
T 2dpo_A 195 LNRLQYAIISEAWRLVEEGIVS----PSDLDLVMSD 226 (319)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSC----HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCC----HHHHHHHHHh
Confidence 444444444444 3667664 5677666654
No 50
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.00 E-value=1.1 Score=47.28 Aligned_cols=184 Identities=13% Similarity=0.084 Sum_probs=110.1
Q ss_pred CCeeeccCCC---chhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 299 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 299 ~~~~FNDDiQ---GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+.+.|.--- .+|=-+++.+|+..|..|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 4555664322 234458999999999999999999999999999999999988643 64 57888763
Q ss_pred CcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 376 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 376 GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
.- . .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~----------~--~~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ----------A--RE---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH----------H--HS---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh----------h--hc---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 00 01123579999986 89887542 1 34689999998885 5667776775
Q ss_pred CCCCCCCCHHHHhcccCCcEEEec-----CCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHH
Q 007754 448 PTSQSECTAEEAYTWSKGRAIFAS-----GSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEA 522 (591)
Q Consensus 448 Pt~~aEct~edA~~wt~GraifAs-----GSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~a 522 (591)
-.---|-.-.+|+ .+|+..-|. .=|.+ +.. .. + +|+.+-|=++--...+ -..|...+++.
T Consensus 209 G~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~~----~~~-l~--~-~nvi~TPHiag~t~e~-----~~~~~~~~~~n 273 (380)
T 2o4c_A 209 GAVVDNQALRRLL--EGGADLEVALDVWEGEPQA----DPE-LA--A-RCLIATPHIAGYSLEG-----KLRGTAQIYQA 273 (380)
T ss_dssp GGGBCHHHHHHHH--HTTCCEEEEESCCTTTTSC----CHH-HH--T-TCSEECSSCTTCCHHH-----HHHHHHHHHHH
T ss_pred CcccCHHHHHHHH--HhCCCceEEeeeeccCCCC----chh-hc--c-CCEEEccccCcCCHHH-----HHHHHHHHHHH
Confidence 2211221122333 355543331 11211 111 11 1 4788888776322111 13455555666
Q ss_pred HHcccCc
Q 007754 523 LAKQVTE 529 (591)
Q Consensus 523 LA~~v~~ 529 (591)
+......
T Consensus 274 l~~~l~g 280 (380)
T 2o4c_A 274 YCAWRGI 280 (380)
T ss_dssp HHHHHTC
T ss_pred HHHHHcC
Confidence 6665543
No 51
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.99 E-value=0.15 Score=51.85 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877754 365 689988874
No 52
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.95 E-value=0.21 Score=51.71 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=62.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc----CCCCCHH
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~----~~~~~L~ 404 (591)
++..+++|+|||.+|.+++..+.. .| | +++++|+. .+| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999887754 26 2 68888874 111 222222232210 0113466
Q ss_pred HHhcccCCcEEEeccCCCCC-----CCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 405 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
+.++ +.|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999998876652 5888888885 45577777754
No 53
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.93 E-value=0.29 Score=49.93 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=64.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCC---CCCHHHHhc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~---~~~L~e~V~ 408 (591)
||+|+|| |..|..++.+|+. .|+ ...++|+|.+-. .+...+|.+...+ . +-.. ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 7999998 9999998877652 354 367999998641 1000012111100 0 0001 135888898
Q ss_pred ccCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 89888554444 2 23567888888889998988899998
No 54
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.88 E-value=0.17 Score=52.14 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 375 689999885
No 55
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.86 E-value=0.15 Score=51.46 Aligned_cols=50 Identities=22% Similarity=0.289 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++++++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999777777766653 365 689988874
No 56
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.85 E-value=0.15 Score=51.58 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=63.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh------hhhccccCC---CCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK------KPWAHEHEP---VNN 402 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k------~~fA~~~~~---~~~ 402 (591)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++ +.... ..+...... ..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d 66 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDD 66 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCC
Confidence 5899999999999999988754 64 2599999852 11 11111 011100111 145
Q ss_pred HHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 403 LLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
+ ++++. .|++|=+.+.+.. ..+++++.+.++++.-+|+-.|||..
T Consensus 67 ~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 67 Y-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp G-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred H-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 6 67765 8888855544321 24677888888888899999999973
No 57
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=92.83 E-value=0.16 Score=52.16 Aligned_cols=49 Identities=33% Similarity=0.443 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt 181 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC
Confidence 5778888888999999999999999877777776654 375 689998874
No 58
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.75 E-value=0.37 Score=52.69 Aligned_cols=109 Identities=15% Similarity=0.187 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh
Q 007754 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (591)
Q Consensus 310 TaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~ 389 (591)
+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+.. .|. +++.+|++.. ..
T Consensus 259 ~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----------~~ 313 (494)
T 3d64_A 259 CRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----------CA 313 (494)
T ss_dssp HHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----------HH
T ss_pred hhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----------hH
Confidence 333344552 3568899999999999999999999998753 253 6888887421 00
Q ss_pred hhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 390 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. ..+...-...+|.|+++. .|+++......++++++.++.|. +.-||.=.|...
T Consensus 314 ~-~a~~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 314 L-QAAMEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp H-HHHTTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred H-HHHHcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0 000111112479999986 99999998778899999999995 567888777754
No 59
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=92.74 E-value=0.18 Score=54.64 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=31.0
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCC
Q 007754 427 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP 474 (591)
Q Consensus 427 ~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSP 474 (591)
.++++.|.++|+.-+++=.|||. +-+|- -+.++++=|+|=.+-||
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCGG
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEECCCH
Confidence 68999999999999999999998 44442 23444544554433333
No 60
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.74 E-value=0.25 Score=48.96 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=56.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
.|++.+++..|..+++.+++|+|+|.+|..+|..+... |. +++++|+. .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998887653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007754 396 EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (591)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (591)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0112267777765 89999766544
No 61
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.72 E-value=0.17 Score=51.90 Aligned_cols=105 Identities=18% Similarity=0.296 Sum_probs=66.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC---CCHHHHhc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~---~~L~e~V~ 408 (591)
.||.|+|||+.|.++|.+++.. |+ -+++|+|.+-=..+.-..++.+.. .+....... .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999988763 54 139999986210000000011111 111111111 57888888
Q ss_pred ccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 409 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 409 ~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 6 89888554333 32 14678888889998888888899984
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.43 E-value=0.17 Score=50.96 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=59.7
Q ss_pred HHHHHHHHHH-hhCCCeeeeeecCCCccHHHHHHHHc---------CCCeeeccC-CCchhHHHHHHHHHH-HHHhCCCc
Q 007754 262 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYG---------TTHLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 329 (591)
Q Consensus 262 idefv~av~~-~fGp~~lIqfEDf~~~~Af~lL~ryr---------~~~~~FNDD-iQGTaaV~LAgll~A-~r~~g~~l 329 (591)
+.++++.++. .|+. ++.----...++++|++.. |.+ ++.|+ ..|.-.= -.|++.+ ++..|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 4666766653 4433 3333333345566555432 122 33332 3442221 3578888 88888899
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 99999999999777777766654 365 689988774
No 63
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.25 E-value=0.23 Score=50.05 Aligned_cols=48 Identities=33% Similarity=0.396 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.|++.+++..|.++++.|+|++|||-|+-+|+-.|.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4677888989999999999999999999888876654 365 78999987
No 64
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.24 E-value=0.64 Score=51.06 Aligned_cols=179 Identities=18% Similarity=0.214 Sum_probs=118.0
Q ss_pred CChhhhHHHHHHHHHHHHH--hhCCCeeeeeecCCCccHH--HHHHHHcC---CC------eeeccC---------CCch
Q 007754 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAF--ELLAKYGT---TH------LVFNDD---------IQGT 310 (591)
Q Consensus 253 ~~g~~Y~~~idefv~av~~--~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~------~~FNDD---------iQGT 310 (591)
.+..|-..|.-.||..+.+ ..||..-|-=+|++..-.. -+.+.|+. .. |+-..- ..-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4567788899999999985 7789988999999875322 16677742 11 111111 1235
Q ss_pred hHHHHHHHHH------HHHHhCC--CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCC
Q 007754 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (591)
Q Consensus 311 aaV~LAgll~------A~r~~g~--~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r 382 (591)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 5545555443 3456675 48999999999999999999988753 63 4566899999999764
Q ss_pred cCCCchh-----hhhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 007754 383 KDSLQHF-----KKPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (591)
Q Consensus 383 ~~~l~~~-----k~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (591)
.|+.. +.....- -+....+.+.+-.++.||||=+..+ +..|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 34432 2221110 0000011123456789999988775 79999988877 4789999998 54
No 65
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.21 E-value=0.27 Score=47.73 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.7
Q ss_pred hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc--cCCCcCCCc-hhhhhhccc--cCC
Q 007754 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHE--HEP 399 (591)
Q Consensus 325 ~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv--~~~r~~~l~-~~k~~fA~~--~~~ 399 (591)
...++...||.|+|+|..|..+|..+... | .+++++|++-=- .+.....+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999988753 5 368888875210 000000000 001223222 112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 007754 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 449 (591)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 449 (591)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578899986 88877 444332 345666666 4333677999999974
No 66
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.98 E-value=1.5 Score=44.54 Aligned_cols=121 Identities=16% Similarity=0.095 Sum_probs=81.0
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhc
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~ 358 (591)
..+.+.|----. +|=-+++.+|+..|. .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 456666643322 334478888888775 35689999999999999999999988642
Q ss_pred CCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 007754 359 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 434 (591)
Q Consensus 359 G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma 434 (591)
|+ +++.+|+.. + ..+ .....-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~-------~---~~~--~~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD-------I---REK--AEKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC-------C---HHH--HHHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc-------c---hhH--HHhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888641 1 100 00101111378898886 888885421 34678899998885
Q ss_pred cCCCCcEEEEcCC
Q 007754 435 SFNEKPLILALSN 447 (591)
Q Consensus 435 ~~~erPIIFaLSN 447 (591)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5668887777
No 67
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.73 E-value=1.2 Score=48.55 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=75.7
Q ss_pred HHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCC
Q 007754 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (591)
Q Consensus 323 r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~ 401 (591)
|..+..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++ +.+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~------------~~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEID------------PINALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC------------HHHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCC------------HHHHHHHHHcCCEEe
Confidence 456678899999999999999999987754 262 68888763 111112221 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 461 (591)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 89999998888899989999885 566777777755 3666555443
No 68
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.63 E-value=0.55 Score=48.57 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=60.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc----cCCCCCH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~----~~~~~~L 403 (591)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999887754 362 688888741 11 11111111110 0112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 899998876553 46899999885 34566666643
No 69
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.62 E-value=0.24 Score=50.44 Aligned_cols=105 Identities=17% Similarity=0.254 Sum_probs=62.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCC-CCCHHHHhccc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~-~~~L~e~V~~v 410 (591)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....+|.+. .++...... ..+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766542 54 257999998521000000011111 111110000 0123466765
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+.. .-+++++.|.++++.-++|-.|||-
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 8888855444421 2356788888888888888899997
No 70
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.58 E-value=1.4 Score=47.15 Aligned_cols=114 Identities=22% Similarity=0.262 Sum_probs=81.4
Q ss_pred ChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHH---HHHHHc---CCC-e---eeccC----------CCchhHH
Q 007754 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (591)
Q Consensus 254 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~~-~---~FNDD----------iQGTaaV 313 (591)
+.+|-..|...|+.++.+.-||..-|-=+|++.. +.+ +.+.|+ ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678899999999998899988989999874 322 334552 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEE-cCCCccc
Q 007754 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIV 379 (591)
Q Consensus 314 ~LAgll~A~r~~g~~-l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lv-D~~GLv~ 379 (591)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 677788889999999 9999999999999999999987641 264 44444 8876544
No 71
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.54 E-value=0.091 Score=53.18 Aligned_cols=104 Identities=17% Similarity=0.294 Sum_probs=59.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCC-CCCHHHHhcccC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 411 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~-~~~L~e~V~~vk 411 (591)
||.|+|||+.|.++|..++. .|+ .+.++|+|.+---......++.+.. +|..+..- ..+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 79999999999999987754 254 2479999985210000000011100 11111000 023 356665
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 412 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||..
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD 120 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH
Confidence 8888855544321 11788888888888888888999983
No 72
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.35 E-value=0.24 Score=53.49 Aligned_cols=106 Identities=16% Similarity=0.293 Sum_probs=66.1
Q ss_pred cccceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc---ccCCCCCH
Q 007754 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 403 (591)
Q Consensus 329 l~d~riv~~GAGsA--g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~---~~~~~~~L 403 (591)
++..||.|+||||. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+....+.+.+ .-.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888742 122 2 3899999751 110000000001111 00112589
Q ss_pred HHHhcccCCcEEEeccCCC---------------CCC---------------------CHHHHHHHHcCCCCcEEEEcCC
Q 007754 404 LDAVKVIKPTILIGSSGVG---------------RTF---------------------TKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------t~evv~~Ma~~~erPIIFaLSN 447 (591)
.||++. .|.+|=.-.+| |.. -.++++.|.+++..-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999987 88887333222 221 3577788889999999999999
Q ss_pred CC
Q 007754 448 PT 449 (591)
Q Consensus 448 Pt 449 (591)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 73
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.21 E-value=0.39 Score=48.91 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=64.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCCCHHHHhccc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~~L~e~V~~v 410 (591)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999988643 54 268999998631 1111101221 2111 0111466 66776
Q ss_pred CCcEEEeccCCC--CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 411 KPTILIGSSGVG--RT-----------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 411 kPtvLIG~S~~~--g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
.|++|=..+.+ |- .-+++++.|.++++.-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89888555443 10 13578888889999999888999983
No 74
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.16 E-value=0.34 Score=47.43 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=54.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887754 252 58888874 111 1121112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007754 396 EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (591)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 422 (591)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3467676 5 489999766544
No 75
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.13 E-value=0.18 Score=51.69 Aligned_cols=105 Identities=18% Similarity=0.299 Sum_probs=61.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc--cCCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~--~~~~~~L~e~V~~ 409 (591)
.||.|+|||+.|.++|.+++. .|+ -+++|+|.+-=..+....++.+...++... -....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 589999999999999987764 265 139999985210000000111111111111 0011456 77776
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 410 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
.|++|=+.+.+ |. .-+++.+.+.++++.-+|+--|||.+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~ 135 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD 135 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH
Confidence 88888544322 32 14567888888888878776799984
No 76
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.00 E-value=0.41 Score=48.64 Aligned_cols=99 Identities=15% Similarity=0.330 Sum_probs=61.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhh------hccccC-CCCCHHH
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAHEHE-PVNNLLD 405 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~------fA~~~~-~~~~L~e 405 (591)
||.|+|||+.|.++|..++.. |. .+.++++|.+- ++ +...... +..... ...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 24799999851 11 1111111 110000 0123 35
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 007754 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQ 451 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (591)
+++. .|++|=+...+.. .-+++++.|.++++.-+|+-.|||...
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 5654 8888744443331 126888889888888788889999843
No 77
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.97 E-value=0.28 Score=48.66 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-.|++.+++..|..+++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888887776542 4 478888874
No 78
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=90.91 E-value=1.3 Score=46.93 Aligned_cols=120 Identities=10% Similarity=0.097 Sum_probs=86.1
Q ss_pred CCCeeeccCC---CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3566666432 2345567999999999999999999999999999999999988653 65 6777876
Q ss_pred CCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----C----CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 375 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----G----VGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 375 ~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~----~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.. . . .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 0 0 00 11234589999987 89887432 1 45689999999995 677888777
Q ss_pred CCC
Q 007754 447 NPT 449 (591)
Q Consensus 447 NPt 449 (591)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 633
No 79
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=90.78 E-value=0.37 Score=50.03 Aligned_cols=114 Identities=15% Similarity=0.160 Sum_probs=67.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
+|.+++.... +....++.|+|+|..|..++..+... .++ ++++++|+. .+ ........|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~---~a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PL---ATAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HH---HHHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHHHh
Confidence 3455555553 24567999999999999888766543 243 688888873 11 12233333321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHH
Q 007754 396 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAE 457 (591)
Q Consensus 396 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~e 457 (591)
. .....++.|+++. .|++|=++..+ -+|..+.+ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 0 1224689999986 89998665543 13333322 23447777775 55 5777654
No 80
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.75 E-value=0.4 Score=47.40 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-.|++.+++..|.++++.+++|+|||.+|..+|..+.. .| .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~-----~G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-----LD-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHH-----cC-------CEEEEEECC
Confidence 56778888888889999999999999887777776654 25 368888774
No 81
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.43 E-value=0.29 Score=50.03 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=66.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC--Ccc--cCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~--GLv--~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ .-- ..+...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998877654 254111112479999975 100 0000000111001222221122578899
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
++. .|++|=+.+.+ |. .++++++.+.+++ ...+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 78888555544 21 2567888999986 787888889998
No 82
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.38 E-value=0.29 Score=48.30 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 56788999999999999999988764 87 799999987
No 83
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.14 E-value=0.28 Score=50.26 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=63.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC----CCchhhhhhcccc--CCCCCHHH
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 405 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~----~l~~~k~~fA~~~--~~~~~L~e 405 (591)
.||.|+|||+.|.++|.+++.. |+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888752 651 39999975 12100 1111111111110 011466 7
Q ss_pred HhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 007754 406 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQ 451 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (591)
+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+-.|||...
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 7876 89888554333 31 346788888888988887778999843
No 84
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.13 E-value=0.21 Score=50.58 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=63.0
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC--CCcccCCCcCCCchhhhhhccccCC-CCCHHHHhc
Q 007754 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 408 (591)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~r~~~l~~~k~~fA~~~~~-~~~L~e~V~ 408 (591)
||+|.| ||..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887654 254 257999997 31000000001221111 1111000 022 56677
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++|=+.+.+ |. .+++++++|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 5 89888665544 32 4677888999999999999999997
No 85
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=89.96 E-value=2.5 Score=43.11 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=84.5
Q ss_pred eeeecCCCccHHHHHHHHcCCCeeeccCCCc---hhHHHHHHHHHHHHHh---------------------CCCcccceE
Q 007754 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRF 334 (591)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~A~r~~---------------------g~~l~d~ri 334 (591)
|+.-..+..|- .+-.--+..+.+.|----. +|=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555555442 1111113567777764333 3444788888887622 356889999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcE
Q 007754 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (591)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 414 (591)
.|+|.|..|..+|+.+.. .|+ +++.+|+.. .+ ....+ .+ .... .+|.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCE
Confidence 999999999999998753 264 588888641 11 11111 11 0011 278888876 888
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 415 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 415 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
++=.-. ..++++++.++.|. +..++.-.|.
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874321 24677888888774 4567765555
No 86
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.86 E-value=4 Score=41.78 Aligned_cols=121 Identities=14% Similarity=0.166 Sum_probs=76.3
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHHh-------------------------CCCcccceEEEeCcChHHHHHHHH
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI-------------------------GGTLAEHRFLFLGAGEAGTGIAEL 349 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~~-------------------------g~~l~d~riv~~GAGsAg~GIA~l 349 (591)
..+.+.|----. +|=-+++.+|+..|-. |..|.+.+|.|+|.|..|..+|..
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 355666643322 3334678888776621 457889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc-C---CCCCC
Q 007754 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS-G---VGRTF 425 (591)
Q Consensus 350 l~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S-~---~~g~F 425 (591)
+.. .|. +++.+|+.. +. .....+ .-...+|.++++. .|+++=.- . ..+++
T Consensus 169 l~~-----~G~-------~V~~~d~~~-------~~--~~~~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKG-----FNM-------RILYYSRTR-------KE--EVEREL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHH-----TTC-------EEEEECSSC-------CH--HHHHHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHh-----CCC-------EEEEECCCc-------ch--hhHhhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 864 263 688888741 10 110111 0112478888886 88877432 2 23577
Q ss_pred CHHHHHHHHcCCCCcEEEEcCC
Q 007754 426 TKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSN 447 (591)
+++.++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888884 4567776664
No 87
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.78 E-value=0.26 Score=50.68 Aligned_cols=106 Identities=15% Similarity=0.253 Sum_probs=63.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
..||.|+|||+.|..++-+|+.. ++ -..++|+|.+-=-.++...+|.+. .+|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC-
Confidence 36999999999999988877442 54 268999998410000000012111 1222110000134577776
Q ss_pred CCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+..- -+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 89988555544321 245667777889999999999998
No 88
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.61 E-value=0.45 Score=47.44 Aligned_cols=102 Identities=14% Similarity=0.281 Sum_probs=60.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc-hhhhhhcccc--CCCCCHHHHhc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAVK 408 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~-~~k~~fA~~~--~~~~~L~e~V~ 408 (591)
.||.|+|||+.|..+|..|... |. ...++++|++---.++ ..++ .+..++..+. ....+. ++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 74 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EICR 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHhC
Confidence 5899999999999999877542 53 1479999986200000 0000 0111111110 000133 4555
Q ss_pred ccCCcEEEeccCCCCCCCH----------------HHHHHHHcCCCCcEEEEcCCCCC
Q 007754 409 VIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~----------------evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
. .|++|=+.+.+. .+ ++++.|+++++..+|+.++||..
T Consensus 75 ~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 75 D--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 4 788875444332 23 78888988888889999999984
No 89
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.50 E-value=1.4 Score=43.62 Aligned_cols=81 Identities=20% Similarity=0.192 Sum_probs=54.9
Q ss_pred eecCCCccHHHHHHHHcC------CCeeeccCCCchhHHHHHHHHHHHHHh-CCCcccceEEEeC-cChHHHHHHHHHHH
Q 007754 281 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 352 (591)
Q Consensus 281 fEDf~~~~Af~lL~ryr~------~~~~FNDDiQGTaaV~LAgll~A~r~~-g~~l~d~riv~~G-AGsAg~GIA~ll~~ 352 (591)
++-+.-..+.+++++-+. ...+| .|..|.- ..-.|++.+++.. +.++++.+++|.| +|.+|..++..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 454445577777776652 23344 3445532 3456777888777 7889999999999 89888888887764
Q ss_pred HHHHhcCCChhhhcCeEEEEcCC
Q 007754 353 EISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 353 ~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 263 38888874
No 90
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.49 E-value=0.94 Score=47.02 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457789999999999999999998875 87 799999986
No 91
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.44 E-value=0.32 Score=49.79 Aligned_cols=105 Identities=12% Similarity=0.226 Sum_probs=62.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|||+.|..++-+|+.. ++ -..++|+|.+-=-.++-..+|.+. .+|.++..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 5999999999999988876543 54 268999998410000000012211 1232211000134567776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 412 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8998855544421 1245667778899999999999998
No 92
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.39 E-value=0.89 Score=45.13 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=56.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC--CCcccCCCcCCCchhhhhhc--------cccCCCC-
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 401 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~r~~~l~~~k~~fA--------~~~~~~~- 401 (591)
||.|+|+|..|..+|..+... | .+++++|+ +.- .++..++... .......
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988653 5 36888887 311 0111111000 0000112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 402 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 402 -~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++.|+++. .|++| ++... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi-~~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVL-LGVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEE-ECSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEE-EcCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 57777764 78776 33323 25788888876533456888888865
No 93
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.35 E-value=0.33 Score=47.02 Aligned_cols=98 Identities=14% Similarity=0.238 Sum_probs=60.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
++...||.|+|+|..|..+|..+... |. +.++++|++ .+.+......+ ......++.|++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~-------~~~~~~~~~~~--g~~~~~~~~~~~ 66 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRT-------EESARELAQKV--EAEYTTDLAEVN 66 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSS-------HHHHHHHHHHT--TCEEESCGGGSC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCC-------HHHHHHHHHHc--CCceeCCHHHHh
Confidence 45556899999999999999988653 54 347788763 11122221111 011124677777
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
+. +|++|=+ ..... .+++++.+.... +..+|.-+||-.
T Consensus 67 ~~--~Dvvi~a-v~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 67 PY--AKLYIVS-LKDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp SC--CSEEEEC-CCHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred cC--CCEEEEe-cCHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 64 8888843 33333 388888887644 567888888854
No 94
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.34 E-value=0.64 Score=41.53 Aligned_cols=37 Identities=22% Similarity=0.388 Sum_probs=28.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 34566899999999999999988754 25 368889875
No 95
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.33 E-value=0.76 Score=46.44 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=59.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHHHhccc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e~V~~v 410 (591)
||.|+|||+.|.++|..+... ++ -..++++|.+-=..+....++.+....+.... ....++.+ ++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~- 69 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TAN- 69 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCC-
Confidence 799999999999999887542 22 25799999862100000000111000010010 01135544 664
Q ss_pred CCcEEEeccCCC---CCC-----------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGVG---RTF-----------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~~---g~F-----------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+ |-. -+++.+.|+++++.-+|+-+|||-
T Consensus 70 -aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 70 -SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp -CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred -CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 88887444332 321 157778888888888888899997
No 96
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.28 E-value=0.39 Score=48.94 Aligned_cols=107 Identities=13% Similarity=0.235 Sum_probs=65.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-cccCCCCCHHHHhc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-~~~~~~~~L~e~V~ 408 (591)
...||.|+|||+.|..+|-.|+.. |+ -..++|+|.+-=..++...+|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 268999997510000000012222 2332 11000013467777
Q ss_pred ccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++|=+.+.+..- =+++++.|.+++..-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 89988555544321 245677778889999999999998
No 97
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.14 E-value=0.33 Score=50.76 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57889999999999999999999875 87 799999986
No 98
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=89.06 E-value=1.5 Score=44.76 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=66.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc----ccCCCCCHHH
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLD 405 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~----~~~~~~~L~e 405 (591)
...++.|+|+|..|-.+++.+... .++ ++|+++|+. + ...+...+.. +.... ++.|
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~---a~~la~~l~~~~g~~~~~~-~~~e 179 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A---SPEILERIGRRCGVPARMA-APAD 179 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C---CHHHHHHHHHHHTSCEEEC-CHHH
T ss_pred CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H---HHHHHHHHHHhcCCeEEEe-CHHH
Confidence 457999999999998888776542 233 789999986 2 2223333321 11223 8999
Q ss_pred HhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 007754 406 AVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 459 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~edA 459 (591)
+++. .|++|-++... -+|..+.+ .+..+|..++. |. +-|+.++-.
T Consensus 180 av~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 180 IAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp HHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred HHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 9987 99999765432 24554433 36778888875 44 578888754
No 99
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.91 E-value=0.44 Score=48.60 Aligned_cols=98 Identities=22% Similarity=0.339 Sum_probs=61.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc------ccC-CCCCHH
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE-PVNNLL 404 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~------~~~-~~~~L~ 404 (591)
.||.|+|||+.|..+|-+++. .|+ -+.++|+|.+ .++ +......+.+ +.. ...+ .
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~---~~g~~~dl~~~~~~~~~~~i~~~~-~ 69 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEK---AIGEAMDINHGLPFMGQMSLYAGD-Y 69 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC----------CCHHHHHHTTSCCCTTCEEEC--C-G
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHH---HHHHHHHHHHhHHhcCCeEEEECC-H
Confidence 589999999999998887654 254 2589999985 222 2211111211 100 0123 5
Q ss_pred HHhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 405 DAVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++++. .|++|=+.+.+..- -+++++.|.+++..-+|+-.|||.
T Consensus 70 ~a~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 70 SDVKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GGGTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 66765 89888555444211 168888999999999999999997
No 100
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=88.88 E-value=0.29 Score=53.30 Aligned_cols=127 Identities=15% Similarity=0.141 Sum_probs=74.0
Q ss_pred cceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-c--ccCC---CCC
Q 007754 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 402 (591)
Q Consensus 331 d~riv~~GAGsAg--~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-~--~~~~---~~~ 402 (591)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4589999999965 4446666431 122 136899999852 11010111111111 0 0011 247
Q ss_pred HHHHhcccCCcEEEeccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 007754 403 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 442 (591)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~erPII 442 (591)
+.++++. .|++|=+.++ .|.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8889986 8988855432 13333 6889999999999999
Q ss_pred EEcCCCCCCCCCCHHHHhcccCCcEEEecCCC
Q 007754 443 LALSNPTSQSECTAEEAYTWSKGRAIFASGSP 474 (591)
Q Consensus 443 FaLSNPt~~aEct~edA~~wt~GraifAsGSP 474 (591)
+-.|||. . +..+-+.++..-|+|=.+.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~rviG~c~~~ 177 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPIKAVGFCHGH 177 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCSEEEEECSGG
T ss_pred EEeCCcH--H-HHHHHHHHCCCCcEEecCCCH
Confidence 9999998 2 233334445554544334444
No 101
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=88.77 E-value=1.3 Score=45.05 Aligned_cols=112 Identities=20% Similarity=0.172 Sum_probs=66.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
++.+++..... ....++.|+|+|..|-.++..+... .++ ++++++|+. .++ .......|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555554432 3567999999999998888777543 233 678888873 111 2233333321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 007754 396 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 457 (591)
Q Consensus 396 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~aEct~e 457 (591)
+.. ..++.|++ . .|++|=++..+ -.|..+. ..+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~------l~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEW------VEEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGG------CCTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHH------cCCCeEEEECCCCCCC-ccccCHH
Confidence 112 46788988 4 89998665532 1333322 23456888883 455 6777764
No 102
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.71 E-value=0.49 Score=47.73 Aligned_cols=95 Identities=21% Similarity=0.312 Sum_probs=56.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc--------ccCCCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--------EHEPVNN 402 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~--------~~~~~~~ 402 (591)
+.||.|+|+|+.|..+|..|..+ | .+++++|+.. . ..+..++...+ ...-..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~---~~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----E---IVDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----H---HHHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----H---HHHHHHHhCCcccCCCCeeeEEEeCC
Confidence 46999999999999999988753 5 4688887741 0 01111111000 0001135
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 007754 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 451 (591)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (591)
+.| ++. .|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 75 ~~~-~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred HHH-hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 555 543 67665 33322 567788877654 55688889997654
No 103
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.45 E-value=1.3 Score=44.86 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=63.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
++.+++.... +....+|.|+|+|..|..++..+... .|+ ++++++|+. .+ ......+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~---~~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KE---NAEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HH---HHHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHhhC
Confidence 3445553332 44667999999999999998887653 253 678888863 11 12222222210
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCH
Q 007754 396 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 456 (591)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~ 456 (591)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854331 2233331 1234568887743 43 355543
No 104
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.27 E-value=4.7 Score=43.13 Aligned_cols=193 Identities=13% Similarity=0.178 Sum_probs=117.0
Q ss_pred cCCCeeeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007754 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (591)
Q Consensus 297 r~~~~~FNDDiQ---GTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (591)
+..+++||---- .+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 457888886433 3455678888888763 24578999999999999999999987643
Q ss_pred HhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007754 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (591)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 431 (591)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 6888887411 1110 01 124689999987 89887432 123789999999
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCC-CC--cceeCCeeeCc-CCccccccchhhhHHHHHhC
Q 007754 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVP-GQANNAYIFPGFGLGLVISG 507 (591)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSP-F~--pv~~~G~~~~p-~Q~NN~yiFPGlglG~~~s~ 507 (591)
.|. +..++.=.|.-..--|-.-.+|+ ..|+.- +.|.. |+ |..-+.....| -+..|+.+-|=+|-...-+
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea- 305 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA- 305 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH-
Confidence 995 67788888875432333333444 356643 22222 21 11101000011 3457899999876432222
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007754 508 AIRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 508 a~~Itd~m~~aAA~aLA~~v~ 528 (591)
-+.|...+++.|.+...
T Consensus 306 ----~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 306 ----QERIGTEVTRKLVEYSD 322 (416)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHh
Confidence 24566666777776653
No 105
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.26 E-value=2.4 Score=40.63 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=60.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
..||.|+|+|..|..+|..+... |.. ...+++++|+. .++ + ......++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988653 521 01368888864 111 0 00112467788875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78776 33333 357888888876656668888888775
No 106
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.25 E-value=0.91 Score=48.98 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=63.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (591)
.++..+|.|+|+|..|..+|..|.+. |. +++++|+. . +..+.....+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35667899999999999999988642 63 57777763 1 112221111100 01123578888
Q ss_pred hccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 407 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 407 V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
++.. +||++| ++...+..++++++.+...- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 55545556888998887654 456888899864
No 107
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.13 E-value=3.2 Score=43.14 Aligned_cols=192 Identities=16% Similarity=0.097 Sum_probs=110.8
Q ss_pred CCCeeeccCC---CchhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDI---QGTASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~A~r~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (591)
..+++.|--- +.+|=-+++-+|+..|-. |..|.+.++.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 4566666432 234555788888877642 4678999999999999999999988642
Q ss_pred HHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 007754 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (591)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~ev 429 (591)
|+ +++.+|+... +... +.......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~~---~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHAL---EEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHHH---HTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chhh---hcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 64 6888887521 1110 1111123589999986 898884322 237899999
Q ss_pred HHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCC-CCcceeCCeeeCcCCccccccchhhhHHHHHhCC
Q 007754 430 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGA 508 (591)
Q Consensus 430 v~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSP-F~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a 508 (591)
++.|. +..++.=.|.-..--|-.-.+|+ .+|+.-.| |-. |++- - .....--+..|+.+-|=+|-...-
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~E-P-~~~~pL~~~~nvilTPHia~~t~e--- 318 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANE-P-AIDPRYRSLDNIFLTPHIGSATHE--- 318 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTT-T-SCCTTGGGCTTEEECCSCTTCBHH---
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCC-C-CCCchHHhCCCEEEcCccCcCCHH---
Confidence 99995 66788877763322232233344 35654332 211 1100 0 000111245688888876632111
Q ss_pred cccCHHHHHHHHHHHHcccC
Q 007754 509 IRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 509 ~~Itd~m~~aAA~aLA~~v~ 528 (591)
-...|...+++-|.....
T Consensus 319 --~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 319 --TRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp --HHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHc
Confidence 124455556666655543
No 108
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.77 E-value=3 Score=42.33 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=73.1
Q ss_pred hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE
Q 007754 310 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 371 (591)
Q Consensus 310 TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l 371 (591)
+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 344467788877662 24578999999999999999999988642 64 6888
Q ss_pred EcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 372 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 372 vD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
+|+.. +. ...+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.|.
T Consensus 171 ~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 171 YDPYP-------NE-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp ECSSC-------CH-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred ECCCC-------Ch-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 88741 10 0111 11 1112378898876 888884421 34688899998885 5668777776
No 109
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.75 E-value=0.58 Score=47.79 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478999999999999999999999876 87 799999987
No 110
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.73 E-value=0.52 Score=48.72 Aligned_cols=107 Identities=15% Similarity=0.252 Sum_probs=65.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
...||.|+|||..|..+|..|+.. |+ .+.+.|+|..-=..++-.-+|.+. .+|.....-..+..++++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346899999999999999888753 55 258999998310000000012221 1232111001233466765
Q ss_pred cCCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+ | +| -+++++.|.+++..-+|+-.|||.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88877444433 2 23 257888899999999999999998
No 111
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.64 E-value=1.8 Score=45.05 Aligned_cols=95 Identities=9% Similarity=0.192 Sum_probs=61.4
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCCCHHHHh
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~~L~e~V 407 (591)
++..||.|+|.|..|..+|..|... | -+++++|+. . + ....++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~----~~~~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---N----AVQALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---H----HHHHHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---H----HHHHHHHCCCEEeCCHHHHH
Confidence 3467999999999999999988753 5 367777763 1 1 11122221 12346888888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCC
Q 007754 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNP 448 (591)
Q Consensus 408 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNP 448 (591)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 568877 333333 678888887654 356688878773
No 112
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=87.64 E-value=3.8 Score=42.61 Aligned_cols=174 Identities=15% Similarity=0.073 Sum_probs=101.8
Q ss_pred CCCeeeccCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (591)
Q Consensus 298 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (591)
..+.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 45666654322 2344577888887753 25679999999999999999999988642
Q ss_pred HHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHH
Q 007754 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVI 430 (591)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv 430 (591)
|+ +++.+|+... .....+. . ......+|.|+++. .|+++=. ....++|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~-------~~~~~~~-~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM-------APELEKE-T--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC-------CHHHHHH-H--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc-------CHHHHHh-C--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 65 5888887421 0111111 0 11123589999987 8988832 133468999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCccccccchhhhHH
Q 007754 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 502 (591)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG 502 (591)
+.|. +..+|.=.|+-..--|-.-.+|++ +|+.-.|.--=|.+--. .... --+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCC
Confidence 9995 677888777744223333334443 56654333222211100 0000 1134578888876533
No 113
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.57 E-value=0.36 Score=41.29 Aligned_cols=103 Identities=13% Similarity=0.173 Sum_probs=51.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHH-
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~- 406 (591)
++..+|+|+|+|..|..+++.+.. .|. +++++|++. ++.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g~-------~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MGH-------EVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TTC-------CCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999887754 252 577888742 110111111001111 11111123222
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 589998665532011233444444455556666666665
No 114
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.45 E-value=0.61 Score=48.57 Aligned_cols=96 Identities=18% Similarity=0.285 Sum_probs=61.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc----cCCCCCH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~----~~~~~~L 403 (591)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+.. . .+...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~---~l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----D---KLRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----H---HHHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----H---HHHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999987754 263 688888741 1 111111112110 0012357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
.+.++. .|++|.+.+.+ .+++++.++.|. +.-+|.=+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 787875 89999876544 457899998885 3456666663
No 115
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=87.36 E-value=0.33 Score=52.33 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=73.9
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc--ccC-C---CCCHH
Q 007754 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--EHE-P---VNNLL 404 (591)
Q Consensus 332 ~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~--~~~-~---~~~L~ 404 (591)
.||.|+|||+. |..++..|+.. ..++. -..++|+|.+-- ++|-+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 267999998520 0111101111112211 101 1 14788
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
++++. .|++|=+.++++. .-+++++.|.++|..-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99987 8998866665421 13588899999999999999999982
Q ss_pred CCCCCHHHHhcccCCcEEEecC
Q 007754 451 QSECTAEEAYTWSKGRAIFASG 472 (591)
Q Consensus 451 ~aEct~edA~~wt~GraifAsG 472 (591)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2233344555332455543
No 116
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.32 E-value=3.2 Score=42.80 Aligned_cols=108 Identities=16% Similarity=0.273 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE
Q 007754 310 TASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC 370 (591)
Q Consensus 310 TaaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~ 370 (591)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 344467777776553 2457899999999999999999998754 264 588
Q ss_pred EEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 371 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 371 lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.+|+..- . ... + . ...+|.|+++. .|+++=.- ...++++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~~----~---~~g----~-~---~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSKK----P---NTN----Y-T---YYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSCC----T---TCC----S-E---EESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCch----h---ccC----c-e---ecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 8887421 1 110 1 1 12478888876 88877432 124688889999885 456777666
Q ss_pred CCC
Q 007754 447 NPT 449 (591)
Q Consensus 447 NPt 449 (591)
.-.
T Consensus 252 rG~ 254 (333)
T 3ba1_A 252 RGP 254 (333)
T ss_dssp CGG
T ss_pred CCc
Confidence 643
No 117
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.04 E-value=0.84 Score=47.03 Aligned_cols=106 Identities=16% Similarity=0.310 Sum_probs=63.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC---CCHHH
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~---~~L~e 405 (591)
++..||.|+|||..|.++|.+|+. .|+ + .+.|+|.+-=..++-..+|.+. ..|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 556799999999999999988765 365 2 6999998521110000012221 1122111111 244 7
Q ss_pred HhcccCCcEEEeccC---CCCC-----C--C----HHHHHHHHcCCCCcEEEEcCCCC
Q 007754 406 AVKVIKPTILIGSSG---VGRT-----F--T----KEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~---~~g~-----F--t----~evv~~Ma~~~erPIIFaLSNPt 449 (591)
+++. .|++|=+.+ .+|. | | +++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7876 888874443 3332 1 2 56777888899999999999997
No 118
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=86.89 E-value=4.3 Score=41.59 Aligned_cols=137 Identities=10% Similarity=0.085 Sum_probs=87.2
Q ss_pred eeeecCCCccHHHHHHHHcCCCeeeccCCCc---hhHHHHHHHHHHHHH-------------------hCCCcccceEEE
Q 007754 279 IQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKL-------------------IGGTLAEHRFLF 336 (591)
Q Consensus 279 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~A~r~-------------------~g~~l~d~riv~ 336 (591)
|+.--.+..|- ++-.--+..+.+.|---.. +|=-+++.+|+..|. .|..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55544554442 2111123467777753333 344478888887761 234688999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEE
Q 007754 337 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 416 (591)
Q Consensus 337 ~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLI 416 (591)
+|.|..|..+|+.+... |+ +++.+|+.. . ..+. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----I--KGIE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----C--CSCT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----c--HHHH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888742 1 1111 1111 2378898886 89888
Q ss_pred ec----cCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 417 GS----SGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 417 G~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
=. ....++|+++.++.|. +..++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 63 1234789999999885 5668887774
No 119
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=86.87 E-value=0.83 Score=46.68 Aligned_cols=104 Identities=20% Similarity=0.272 Sum_probs=63.9
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhh-ccccCCCCCHHHHhcc
Q 007754 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~f-A~~~~~~~~L~e~V~~ 409 (591)
.||+|+| +|..|..++..|+. .|+ -..++++|.+.- .+...+|.+...+. .+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998877643 254 256999996421 00000011100000 0000011257788886
Q ss_pred cCCcEEEeccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+ | ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 89888555444 2 23677888888889888999999998
No 120
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.77 E-value=0.87 Score=46.13 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=60.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 409 (591)
.||.|+|||..|.++|-.++. .|+ . .++|+|.+-=-.++...+|.+...+..... ....++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~--~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G--DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C--eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999997754 264 1 399999751000000001111110111110 001456 67776
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+.. .-+++.+.+.++++.-+|+--|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8988855544421 1246778888888888888889998
No 121
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.72 E-value=0.59 Score=52.52 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 57789999999999999999999875 87 7999999873
No 122
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.54 E-value=0.8 Score=46.53 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=63.9
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHHHhccc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e~V~~v 410 (591)
||.|+|||+.|.++|.+|+.. |+ -+.+.|+|.+-=..++-.-+|.+...+|-... ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 25799999752111100001222111121110 00124 678876
Q ss_pred CCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+. +|- | -+++++.|.+++..-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 8887744443 332 1 256777888999999999999998
No 123
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.43 E-value=0.68 Score=47.07 Aligned_cols=99 Identities=17% Similarity=0.392 Sum_probs=61.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC----CCchhhhhhcccc--CCCCCHHHH
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLDA 406 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~----~l~~~k~~fA~~~--~~~~~L~e~ 406 (591)
||.|+|||+.|.++|-.++.. |+ +.++|+|.+ .++-+ +|.+...++.+.. ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 689999999999999776542 54 379999985 22110 1111110111110 001355 67
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 407 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++. .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 776 8998865554431 1357788888888888777789998
No 124
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.43 E-value=0.63 Score=41.09 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=25.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|+|+|||.||+-.|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999998875 376 57788864
No 125
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.38 E-value=0.77 Score=43.72 Aligned_cols=93 Identities=13% Similarity=0.181 Sum_probs=57.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l-vD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+-. ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988652 53 4554 5552 1222222222210 111244566665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
+|++| ++..+ ...+++++.++. .+..+|+.+|||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78777 33333 456777777765 45669999999874
No 126
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=86.35 E-value=3.2 Score=43.20 Aligned_cols=144 Identities=13% Similarity=0.160 Sum_probs=89.3
Q ss_pred eeeecCCCccH-HHHHHHHcCCCeeeccCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceE
Q 007754 279 IQFEDFANHNA-FELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRF 334 (591)
Q Consensus 279 IqfEDf~~~~A-f~lL~ryr~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~ri 334 (591)
|+.-..+..|- .+.+.+.+..+.+.|---- .+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 66655555553 2333333335666664322 3344468888887762 3668999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcE
Q 007754 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (591)
Q Consensus 335 v~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 414 (591)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... ..... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998753 264 34888886421 01111 111 00112478898875 898
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 415 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 415 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
++=.-- ..++|+++.++.|. +.-+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 884422 22688998888885 56788878773
No 127
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.25 E-value=1 Score=45.32 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=58.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC--------cccCCCcCCCchhhhhhccccCCCCCH
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--------Lv~~~r~~~l~~~k~~fA~~~~~~~~L 403 (591)
.||.|+|+|+-|..+|..|.+. | .+++++|+.- +...++ ....++ + ++..-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 5 4788888753 111110 000000 0 000011355
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 007754 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (591)
.++.+ .+|++| ++... ..++++++.++.+- +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55543 478777 55544 34678999997643 4568888999764
No 128
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.17 E-value=2.6 Score=44.27 Aligned_cols=178 Identities=15% Similarity=0.090 Sum_probs=100.5
Q ss_pred hhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCe
Q 007754 310 TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 368 (591)
Q Consensus 310 TaaV~LAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~ 368 (591)
+|=-+++-+|+..|- .+..|.+.++.|+|-|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 445567777776662 2346889999999999999999997743 264 6
Q ss_pred EEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEe----ccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 007754 369 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG----SSGVGRTFTKEVIEAMASFNEKPLILA 444 (591)
Q Consensus 369 i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG----~S~~~g~Ft~evv~~Ma~~~erPIIFa 444 (591)
++.+|+.. . ...... ..-...+|.|+++. .|+++= .....++|+++.++.|. +.-++.=
T Consensus 202 V~~~d~~~----~----~~~~~~----~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN 264 (365)
T 4hy3_A 202 IRVFDPWL----P----RSMLEE----NGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFIL 264 (365)
T ss_dssp EEEECSSS----C----HHHHHH----TTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEE
T ss_pred EEEECCCC----C----HHHHhh----cCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEE
Confidence 77787641 0 001111 11112479999986 899883 23345789999999995 5678887
Q ss_pred cCCCCCCCCCCHHHHhcccCCcEEEecCCC-CC--cceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007754 445 LSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 521 (591)
Q Consensus 445 LSNPt~~aEct~edA~~wt~GraifAsGSP-F~--pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~ 521 (591)
.|.-..--|-.-.+|++ .|+.- | |-. |+ |.. .+. .--+..|+.+-|=+|-...- -...|...+++
T Consensus 265 ~aRG~~vde~aL~~aL~--~g~i~-a-aLDV~~~EPl~-~~~--pL~~~~nvilTPHia~~t~e-----~~~~~~~~~~~ 332 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVS--SGHIV-A-ASDVYPEEPLP-LDH--PVRSLKGFIRSAHRAGALDS-----AFKKMGDMVLE 332 (365)
T ss_dssp CSCGGGSCHHHHHHHHH--TTSSE-E-EESCCSSSSCC-TTC--GGGTCTTEEECCSCSSCCHH-----HHHHHHHHHHH
T ss_pred CcCCchhCHHHHHHHHH--cCCce-E-EeeCCCCCCCC-CCC--hhhcCCCEEECCccccCHHH-----HHHHHHHHHHH
Confidence 77643222322333443 56543 3 311 11 100 000 01245678888876642221 22445555566
Q ss_pred HHHcccC
Q 007754 522 ALAKQVT 528 (591)
Q Consensus 522 aLA~~v~ 528 (591)
-|.....
T Consensus 333 ni~~~~~ 339 (365)
T 4hy3_A 333 DMDLMDR 339 (365)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 6655553
No 129
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.11 E-value=0.64 Score=46.24 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...|++.+++..+.++++.+++|+|||.+|..+|..+.+ .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666655532 12 68888874
No 130
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=86.03 E-value=3.3 Score=45.20 Aligned_cols=98 Identities=14% Similarity=0.223 Sum_probs=56.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch-hhhhhcc-c--cCCCCC-HHH
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-E--HEPVNN-LLD 405 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~-~k~~fA~-~--~~~~~~-L~e 405 (591)
+.||||+|||+.|-++|.+|++. .++. ..+|.+.|++-- +. ++.+ ....+.. + ..+... |..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~-~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KV-DVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SC-CHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hh-hHHhhcCCceeEEeccchhHHHHHHH
Confidence 57899999999999999999764 3442 147888887421 11 1111 1112211 1 111112 334
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
+|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 5654 59999654 335788888876531 223455665
No 131
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.98 E-value=0.98 Score=45.24 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677666654 56899999999999999887754 365 679988773
No 132
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=85.95 E-value=0.35 Score=49.26 Aligned_cols=100 Identities=19% Similarity=0.297 Sum_probs=61.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC----CCchhhhhhccccCCCCCHHHHhc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~----~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
||.|+|||+.|..++-+|+.. ++ -+.++|+|.+- ++-+ +|.+ ..+|.++..-..+-.++++
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~----~k~~g~a~dl~~-~~~~~~~~~v~~~~~~a~~ 66 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDR----KLAQAHAEDILH-ATPFAHPVWVWAGSYGDLE 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSH----HHHHHHHHHHHT-TGGGSCCCEEEECCGGGGT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHHHHH-hHhhcCCeEEEECCHHHhC
Confidence 899999999999988876542 44 25899999851 1100 1211 1122211000012256677
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++|=+.+.+ |. .-+++++.|.+++..-+|+-.|||.
T Consensus 67 ~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 67 G--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp T--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 6 88888444433 32 1245677778889999999999998
No 133
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.93 E-value=1.3 Score=42.55 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=59.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|..+|..+... |.. ..++++++|++ .+.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~-------~~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN-------TANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC-------HHHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC-------HHHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988653 531 12478888873 11122222211 11223578898886
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (591)
+|++| ++..+ --.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88877 34333 45678888776543 4567777777664
No 134
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.84 E-value=0.53 Score=51.03 Aligned_cols=126 Identities=17% Similarity=0.263 Sum_probs=74.0
Q ss_pred cceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-c-c-cCC---CCCH
Q 007754 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-E-HEP---VNNL 403 (591)
Q Consensus 331 d~riv~~GAGsA-g~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-~-~-~~~---~~~L 403 (591)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++-+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566655431 01431 26799999852 21111111111221 1 0 111 2478
Q ss_pred HHHhcccCCcEEEeccCCCC---------------C-------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 404 LDAVKVIKPTILIGSSGVGR---------------T-------------------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g---------------~-------------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.++++. .|++|=+.+.++ . .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899987 899886655432 1 1358889999999999999999998
Q ss_pred CCCCCCHHHHhcccCCcEEEecC
Q 007754 450 SQSECTAEEAYTWSKGRAIFASG 472 (591)
Q Consensus 450 ~~aEct~edA~~wt~GraifAsG 472 (591)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333344444332355443
No 135
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=85.71 E-value=9.6 Score=40.34 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=108.7
Q ss_pred cCCCeeeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007754 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (591)
Q Consensus 297 r~~~~~FNDDiQ---GTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (591)
+..+++||---- .+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 356788886543 3444578888888763 25679999999999999999999988642
Q ss_pred HhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007754 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (591)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 431 (591)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 168 ---GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp ---TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 64 6888887421 1010 01 123478898886 88887431 234688999998
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE------EecCCCCCcceeCCeeeCcCCccccccchhhhHHHHH
Q 007754 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 505 (591)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Grai------fAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~ 505 (591)
.|. +.-++.=.|.=.---|-.-.+|++ +|+.- |.. -|.++=+.-. ..--+..|+.+-|=+|-...-
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~-EP~~~~~~~~--~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPT-EPATNSDPFT--SPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC----------CTTT--GGGTTCTTEEEECCCSCCSHH
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCC-CCCCcccccc--chhhcCCCEEECCCCCCCcHH
Confidence 885 566777777532111211223333 45532 222 1221000000 001134588899977632222
Q ss_pred hCCcccCHHHHHHHHHHHHcccC
Q 007754 506 SGAIRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 506 s~a~~Itd~m~~aAA~aLA~~v~ 528 (591)
+ -+.|...+++.|.+...
T Consensus 294 a-----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 A-----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp H-----HHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHc
Confidence 2 23355556666666554
No 136
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.71 E-value=0.57 Score=46.04 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 45678999999999999999998765 76 7899999973
No 137
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.70 E-value=4.7 Score=41.83 Aligned_cols=124 Identities=15% Similarity=0.227 Sum_probs=72.3
Q ss_pred hhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeE
Q 007754 310 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (591)
Q Consensus 310 TaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i 369 (591)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 445567777777652 2467899999999999999999998753 264 68
Q ss_pred EEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEc
Q 007754 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILAL 445 (591)
Q Consensus 370 ~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (591)
+.+|+.. .. .. .+ ....+|.|+++. .|+++=.- ...++++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~--~~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS--GV-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT--TS-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc--cc-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888642 11 00 11 113579999986 89888432 224678889998885 56688878
Q ss_pred CCCCCCCCCCHHHHhcccCCcE
Q 007754 446 SNPTSQSECTAEEAYTWSKGRA 467 (591)
Q Consensus 446 SNPt~~aEct~edA~~wt~Gra 467 (591)
|.-..--|-.-.+|++ +|+.
T Consensus 258 aRG~vvde~aL~~aL~--~g~i 277 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK--SGTI 277 (340)
T ss_dssp SCC----------------CCS
T ss_pred CCCcccCHHHHHHHHH--cCCc
Confidence 7754334444445543 4543
No 138
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=85.62 E-value=8.9 Score=38.83 Aligned_cols=117 Identities=20% Similarity=0.250 Sum_probs=78.2
Q ss_pred CCCeeecc-CCCc--hhHHHHHHHHHHHHHh-----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007754 298 TTHLVFND-DIQG--TASVVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (591)
Q Consensus 298 ~~~~~FND-DiQG--TaaV~LAgll~A~r~~-----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (591)
..+++.|- +... +|=-+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 45677764 3332 2334788888876631 2268899999999999999999987642
Q ss_pred cCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 007754 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (591)
Q Consensus 358 ~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~M 433 (591)
|+ +++.+|+..- +. .+ ....+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 147 -G~-------~V~~~dr~~~---------~~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK---------EG---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp -TC-------EEEEECSSCC---------CS---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCcc---------cc---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 64 6888887532 00 01 123478888875 88887542 23467888888877
Q ss_pred HcCCCCcEEEEcCC
Q 007754 434 ASFNEKPLILALSN 447 (591)
Q Consensus 434 a~~~erPIIFaLSN 447 (591)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678887776
No 139
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.29 E-value=0.57 Score=48.08 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=63.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC--CCHHHHhccc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 410 (591)
||.|+|||..|.++|..|+.. |+ -+.+.|+|.+-=..++-.-+|.+. ..+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988753 55 258999998531111000012211 1121100011 134577776
Q ss_pred CCcEEEeccCC---CCC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGV---GRT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~---~g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+. +|- .-+++++.+.++++..+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 8887744433 332 1256677888999999999999998
No 140
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.26 E-value=0.7 Score=51.75 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.7
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|++.||+|+|||..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999998864 87 799999986
No 141
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.17 E-value=5.1 Score=41.06 Aligned_cols=91 Identities=15% Similarity=0.174 Sum_probs=60.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. +. ...+..-+. ..+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~-------~~-~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR-------KV-NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC-------CH-HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc-------ch-hhhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 263 688888741 10 111110011 1378888
Q ss_pred hcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 407 VKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 407 V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
++. .|+++=.- ...++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 876 89887432 123578888888884 45 7766664
No 142
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.13 E-value=2.1 Score=46.52 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=59.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh-hhc-cccCCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 409 (591)
.+|.|+|+|..|.++|..|... |. +++++|+.- +.++.... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999988753 64 578887631 11111111 000 011123578887765
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 44444445777887776543 346777788743
No 143
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=85.06 E-value=1.1 Score=47.78 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=74.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc---CCCCCHHHHh
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 407 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~-~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~---~~~~~L~e~V 407 (591)
.||.|+|||+. ++..++..+.+ ..++. -+.++|+|.+- +|-+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 66655444443 23442 37899999752 22110001111111111 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 007754 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 453 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~aE 453 (591)
+. .|++|=..++++ +. =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 87 999997777653 22 258899999999 99999999998 2
Q ss_pred CCHHHHhcccCCcEEEecC
Q 007754 454 CTAEEAYTWSKGRAIFASG 472 (591)
Q Consensus 454 ct~edA~~wt~GraifAsG 472 (591)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2223344555332355543
No 144
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.05 E-value=6.5 Score=39.92 Aligned_cols=117 Identities=18% Similarity=0.166 Sum_probs=79.3
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcChHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~~---------------------g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (591)
..+.+.|----. +|=-+++.+|+..|.. |..+.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 456666653323 3344688888776531 4568899999999999999999988642
Q ss_pred HHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 007754 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 429 (591)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 429 (591)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 64 688888742 11 11 1 13578898886 89888542 2346788888
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 007754 430 IEAMASFNEKPLILALSNP 448 (591)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (591)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 87774 56788888873
No 145
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.92 E-value=2.2 Score=40.36 Aligned_cols=80 Identities=16% Similarity=0.229 Sum_probs=49.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
..+...||.|+|+|..|..+|..+... | .+++++|+. .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346677999999999999999988652 5 368888753 11 2
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
++ +.|++| ++.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi-~av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVI-MAVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEE-ECSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEE-EcCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 356555 2222 2345677777654333678888999653
No 146
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.45 E-value=0.69 Score=47.52 Aligned_cols=106 Identities=19% Similarity=0.279 Sum_probs=63.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC--CCHHHHh
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~--~~L~e~V 407 (591)
+..||.|+|||..|.++|..|+. .|+ + .+.|+|.+-=..++-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 265 2 69999985211000000122111 111111111 1224677
Q ss_pred cccCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 408 KVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
+. .|++|=+.+.+ |. | -+++++.+.+++..-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 88887554433 32 1 256777888899888999999997
No 147
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.42 E-value=0.71 Score=47.37 Aligned_cols=107 Identities=17% Similarity=0.267 Sum_probs=65.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC--cccCCCcCCCchhhhhhccccCCC--CCHH
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G--Lv~~~r~~~l~~~k~~fA~~~~~~--~~L~ 404 (591)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++...+|.+ ..++....... .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 4567999999999999999988652 54 3799999851 011111011222 12332211111 1124
Q ss_pred HHhcccCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 405 DAVKVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++++. .|++|=+.+. +|- | -+++++.+++++..-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 66765 8888744433 331 2 257778888999999999999997
No 148
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=84.05 E-value=9.2 Score=39.17 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=81.3
Q ss_pred CCCeeeccCCCch---hHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (591)
Q Consensus 298 ~~~~~FNDDiQGT---aaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (591)
..+.+.|---..+ |=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777543333 33468888877651 24578999999999999999999988642
Q ss_pred HhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007754 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (591)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 431 (591)
|+ +++.+|+..- . . .. .++. ..+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~----~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYPM----K-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSCC----S-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCcc----h-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 5888887521 1 1 11 1121 1378898886 888885421 23689999999
Q ss_pred HHHcCCCCcEEEEcCCCC
Q 007754 432 AMASFNEKPLILALSNPT 449 (591)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt 449 (591)
.|. +..++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 985 566777777643
No 149
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=83.96 E-value=1.5 Score=42.30 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=56.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh---hhhccccCCCCCHHHHhcc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k---~~fA~~~~~~~~L~e~V~~ 409 (591)
||.|+|+|..|..+|..+... | .+++++|+.- ++-+.+.... ..+ ...... +..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~-~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTA-NDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEE-SCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeee-cCccccCC
Confidence 799999999999999988653 5 3688888752 1111111100 000 000001 22466664
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
.|++| ++.... ..+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi-~~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLL-VTLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEE-ECSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEE-EEecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 78777 333332 3689999887653 456777788865
No 150
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=83.87 E-value=14 Score=37.87 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=88.6
Q ss_pred cCCCeeeccCCCch---hHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHH
Q 007754 297 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (591)
Q Consensus 297 r~~~~~FNDDiQGT---aaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~ 355 (591)
+..+.+.|----.+ |=-+++.+|+..|. .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35677777543333 33478888888762 23468899999999999999999988642
Q ss_pred HhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007754 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (591)
Q Consensus 356 ~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 431 (591)
|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 688888742 1 1 0 1 11221 12378898876 888884421 23678889998
Q ss_pred HHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE
Q 007754 432 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI 468 (591)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Grai 468 (591)
.|. +..++.-.|.-..--|-.-.+|++ +|+.-
T Consensus 224 ~mk---~ga~lIn~arg~~vd~~aL~~aL~--~g~i~ 255 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGPLVDTDAVIRGLD--SGKIF 255 (333)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHHH--hCCce
Confidence 885 567888777743223333333433 45543
No 151
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=83.67 E-value=1.5 Score=44.45 Aligned_cols=102 Identities=18% Similarity=0.266 Sum_probs=63.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC--CC-cccCCCcCCCchhhhhhc-cccC--CC-CCHH
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWA-HEHE--PV-NNLL 404 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~--~G-Lv~~~r~~~l~~~k~~fA-~~~~--~~-~~L~ 404 (591)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+. +-..+|.+.. ++. .+.. .. .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~-~~~~dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLE-GLREDIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHH-HHHHHHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhH-HHHHHHHHhH-HhcCCCeEEEeCCcchH
Confidence 7999999 9999998887653 254 256999996 21 000 0000122211 222 1100 00 1367
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
++++. .|++|=+.+.+ |. .+++++++|.+++ +.+|+-.|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 88886 89888666544 22 3568888998999 99999999998
No 152
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=83.46 E-value=12 Score=38.67 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=81.5
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~----------~----------g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (591)
..+.+.|----. +|=-+++-+|+..|- . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367777764333 444568888877751 2 3467899999999999999999988643
Q ss_pred HHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007754 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (591)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 430 (591)
|+ +++.+|+..- +.....+ ...+|.|+++. .|+++=.- ...++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~~----------~~~~~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAYN----------PEFEPFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSCC----------GGGTTTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCChh----------hhhhccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 6888887521 0000111 11389999987 89888542 23578999999
Q ss_pred HHHHcCCCCcEEEEcCCCC
Q 007754 431 EAMASFNEKPLILALSNPT 449 (591)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt 449 (591)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9995 677888777633
No 153
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.44 E-value=1.3 Score=45.66 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=26.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988764 75 5778875
No 154
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.39 E-value=1.9 Score=42.22 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=57.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 35899999999999999988653 42 14688888641 1111111100000 012356667764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 448 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 448 (591)
+|++| ++..+... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 44444333 8888888764 456677767763
No 155
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=83.36 E-value=3.8 Score=42.17 Aligned_cols=188 Identities=15% Similarity=0.244 Sum_probs=110.6
Q ss_pred CCCeeeccCC---CchhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 298 ~~~~~FNDDi---QGTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777642 22444467777777642 26679999999999999999999988643
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007754 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (591)
|+ +++.+|+..- ..+.....+ ...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~-------~~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH-------PADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC-------CCTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc-------hhHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 65 6888887521 111111111 12468888886 88887431 2247899999988
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhC
Q 007754 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 507 (591)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifA-----sGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~ 507 (591)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ +. .-=+..|+.+-|=+|-.
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~~----- 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISGQ----- 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTTC-----
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCccccC-----
Confidence 85 567888777643223333334443 4543221 1112211 00 01234688888876521
Q ss_pred CcccCHHHHHHHHHHHHccc
Q 007754 508 AIRVHDDMLLAASEALAKQV 527 (591)
Q Consensus 508 a~~Itd~m~~aAA~aLA~~v 527 (591)
...-.+.|...+++-|...+
T Consensus 281 t~~~~~~~~~~~~~nl~~~l 300 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFV 300 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 12234566666677666665
No 156
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.28 E-value=3.2 Score=37.33 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=53.6
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhc
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~ 408 (591)
..+|+|.|| |-.|..+++.|.+ .| .++++++++.- +...+......+.. |..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 7777777776654 25 36888877521 10111011111111 2122235777787
Q ss_pred ccCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEEc
Q 007754 409 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILAL 445 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaL 445 (591)
. +|++|=+.+.... .+..++++|.+..-+.|||.=
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~S 110 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 5 8999987765431 145666666654444555543
No 157
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=82.88 E-value=3.3 Score=42.88 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=58.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCccc----CCCc--CCCchhhhhhccccCCCCCHH
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRK--DSLQHFKKPWAHEHEPVNNLL 404 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~----~~r~--~~l~~~k~~fA~~~~~~~~L~ 404 (591)
..||.|+|+|+-|..+|..+... | .+++++|++--.. +.+. ..++..+ +.....-..++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 35899999999999999988653 5 3577777741100 0000 0011100 000000124788
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 007754 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (591)
|+++. +|++| ++... .+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88875 77766 33322 36778888877654 4567778888554
No 158
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.81 E-value=0.69 Score=47.72 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=64.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (591)
-.||.|+|||..|..+|..|+.. |+ .+.+.++|.+-=..++-.-+|.+. .+|.. ...-..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 55 258999997410000000013222 23321 10001122356765
Q ss_pred cCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+. +|- | -+++++.+.+++..-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 8887744433 332 1 257778888999999999999998
No 159
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=82.79 E-value=1.1 Score=44.45 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|.+||..++.+ |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999988753 63 68889874
No 160
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.59 E-value=0.62 Score=45.48 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=55.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc---------cCCCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---------HEPVNN 402 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~---------~~~~~~ 402 (591)
-||.|+|+|..|..+|..+... | .+++++|++.= .++..++.-... .-...+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA-------HIEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH-------HHHHHHhCCEEEEeCCCeeEecceeec
Confidence 3899999999999999888642 5 36888887421 011111100000 000012
Q ss_pred HHHHhccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 007754 403 LLDAVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (591)
Q Consensus 403 L~e~V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (591)
..|+.+.+ +.|++| ++..+ -..+++++.++.+. +..+|..++|...
T Consensus 65 ~~~~~~~~~~~d~vi-~~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 65 PEEIDHQNEQVDLII-ALTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGGCCTTSCCCSEEE-ECSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred chhhcccCCCCCEEE-EEecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22333211 478777 33333 24688888887653 4678888998653
No 161
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.27 E-value=1.2 Score=42.23 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=55.4
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhc
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
-...||.|+|+|..|..+|..+.. .|. +++++|++- +.+ ..++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~-------~~~----~~~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP-------KRT----ARLFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH-------HHH----HHHSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH-------HHH----HHHHHcCCceecHHHHHh
Confidence 345689999999999999988764 253 588887631 111 112111111126778887
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
. +|++|=+ ..+. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi~a-v~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVA-VFRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEEC-SCGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEEC-CChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 4 8888833 3332 3455554 433335668888999873
No 162
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.21 E-value=6.2 Score=40.61 Aligned_cols=139 Identities=15% Similarity=0.091 Sum_probs=87.9
Q ss_pred CCeeeccCCC---chhHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 299 ~~~~FNDDiQ---GTaaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
.+.+.|---- .+|=-+++-+|+..|. .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 4555554222 2444567888877652 35679999999999999999999988643
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHH
Q 007754 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEA 432 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~ 432 (591)
|+ +++.+|+..- +... .......+|.|+++. .|+++=. ....++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~----------~~~~---~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR----------EDLK---EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC----------HHHH---HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc----------hhhH---hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 1100 111112359999986 8988743 13457899999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEE
Q 007754 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIF 469 (591)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Graif 469 (591)
|. +..|+.=.|.-..--|-.-.+|+ .+|+.-.
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~g 251 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAY--QRGKFSG 251 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHH--HTTCEEE
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHH--HhCCceE
Confidence 95 56788877764422333333444 3565543
No 163
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.03 E-value=1 Score=37.11 Aligned_cols=84 Identities=17% Similarity=0.191 Sum_probs=50.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh---hhc-cccCCCCCHHHH
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWA-HEHEPVNNLLDA 406 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~---~fA-~~~~~~~~L~e~ 406 (591)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. + .+...+. .+. -+.....++.++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~---~~~~~~~~~~~~~~~d~~~~~~~~~~ 66 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----A---ALAVLNRMGVATKQVDAKDEAGLAKA 66 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----H---HHHHHHTTTCEEEECCTTCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----H---HHHHHHhCCCcEEEecCCCHHHHHHH
Confidence 4689999999999998887764 252 4688888741 1 1111110 010 011111346666
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcC
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASF 436 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~ 436 (591)
++ ++|++|=+. |..++..+++.+.+.
T Consensus 67 ~~--~~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 67 LG--GFDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp TT--TCSEEEECS--CGGGHHHHHHHHHHT
T ss_pred Hc--CCCEEEECC--CchhhHHHHHHHHHh
Confidence 66 589998665 334677777776653
No 164
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=81.93 E-value=3.1 Score=42.91 Aligned_cols=187 Identities=15% Similarity=0.105 Sum_probs=108.1
Q ss_pred CCeeeccCCC---chhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcC
Q 007754 299 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 359 (591)
Q Consensus 299 ~~~~FNDDiQ---GTaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G 359 (591)
.+.+.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555554221 2344467777777663 35679999999999999999999988643 6
Q ss_pred CChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHHHc
Q 007754 360 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMAS 435 (591)
Q Consensus 360 ~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~ 435 (591)
+ +++.+|+.. +. ..... ......+|.|+++. .|+++=. ....++|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~---~~----~~~~~-----~~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG---RE----RAGFD-----QVYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC---CC----CTTCS-----EEECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh---HH----hhhhh-----cccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888754 11 11111 11123578888876 8888743 1234678888887774
Q ss_pred CCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCcceeCCeeeCcCCccccccchhhhHHHHHhCCcc
Q 007754 436 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIR 510 (591)
Q Consensus 436 ~~erPIIFaLSNPt~~aEct~edA~~wt~GraifA-----sGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~ 510 (591)
+..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++- . .-=+..|+.+-|=++- .+
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t- 284 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YS- 284 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CC-
T ss_pred --CCcEEEECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------cc-
Confidence 567887777633222222233333 4443111 11122110 0 0113467888887653 22
Q ss_pred cCHHHHHHHHHHHHcccCc
Q 007754 511 VHDDMLLAASEALAKQVTE 529 (591)
Q Consensus 511 Itd~m~~aAA~aLA~~v~~ 529 (591)
....|...+++-|.....-
T Consensus 285 ~~~~~~~~~~~nl~~~~~G 303 (324)
T 3hg7_A 285 FPDDVAQIFVRNYIRFIDG 303 (324)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 1256777777777776643
No 165
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=81.91 E-value=1.5 Score=46.50 Aligned_cols=118 Identities=24% Similarity=0.292 Sum_probs=67.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC--C-CHH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--N-NLL 404 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~--~-~L~ 404 (591)
.++++||+|+|.|.+|+++|+++.+ .| -++...|.+-.. .++....+....-+. + .-.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~-------~~~~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFD-------ENPTAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGG-------GCHHHHHHHHTTCEEEESCCCG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCccc-------CChHHHHHHhCCCEEEECCChH
Confidence 4678999999999999999887765 37 478888885210 011111111110000 0 011
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCee
Q 007754 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 484 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~ 484 (591)
+.++. .+|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|-.||| ||||
T Consensus 67 ~~~~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKT 124 (451)
T 3lk7_A 67 ELLDE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKT 124 (451)
T ss_dssp GGGGS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHH
T ss_pred HhhcC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHH
Confidence 12221 167787555655 34677766654 245665 22 334455567788889997 6765
Q ss_pred eC
Q 007754 485 FV 486 (591)
Q Consensus 485 ~~ 486 (591)
-+
T Consensus 125 TT 126 (451)
T 3lk7_A 125 TT 126 (451)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 166
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=81.89 E-value=1.7 Score=45.60 Aligned_cols=96 Identities=20% Similarity=0.313 Sum_probs=53.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-----------ccCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-----------~~~~~ 400 (591)
.||+|+|||-.|..+++.|.+ .|- .-.++.++|++ .+ .+......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~---~~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LS---KCQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HH---HHHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HH---HHHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665542 231 01478888874 11 12222222211 11122
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
.++.++++..++|++|=+++. .+..+++++..+.. .++| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888988899999977653 24566776654433 3444 2544
No 167
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.74 E-value=2.9 Score=41.97 Aligned_cols=109 Identities=14% Similarity=0.184 Sum_probs=63.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh-----hhccc------cCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEP 399 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~-----~fA~~------~~~ 399 (591)
..||.|+|+|..|..+|..+... |........+++++|+..-.. .+. .....++ .|-.. ...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIG-GKK-LTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSS-SSB-HHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhh-hhH-HHHHHHhcCcccccCCcccCccCeEE
Confidence 36899999999999999988764 310000014688888753211 000 0111110 01000 001
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 007754 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (591)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (591)
..++.|+++. .|++| ++... ...+++++.++.+. +..+|..++|-.+
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 1467788875 78777 44333 46789999887653 4678889999654
No 168
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=81.59 E-value=6.7 Score=41.53 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=63.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+... .. .....+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~~-------~~-~~~~~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRHRL-------PE-SVEKEL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSCC-------CH-HHHHHH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCCcc-------ch-hhHhhc--CceecCCHHH
Confidence 5679999999999999999999987532 53 5888876311 01 111111 0011247889
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 406 ~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
+++. .|+++=.- ...++|+++.++.|. +.-+|.=.|.
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aR 284 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTAR 284 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCC
Confidence 8886 89887442 234788998888885 5678887776
No 169
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.58 E-value=2.2 Score=45.88 Aligned_cols=97 Identities=18% Similarity=0.175 Sum_probs=59.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-----cccCCCCCHHHHh
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-----~~~~~~~~L~e~V 407 (591)
||.|+|+|..|..+|..|... |. +++++|+.. + .++...+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----S---KSEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----H---HHHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 699999999999999988653 63 578887631 1 1111111110 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 408 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
+.. ++|++| ++...+...+++++.+...- +.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 44444445677887776533 456888888854
No 170
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=81.32 E-value=1.3 Score=45.73 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56788999999999999999999876 87 799999976
No 171
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=81.31 E-value=11 Score=38.73 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=63.1
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- .....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA-------DAETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC-------CHHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc-------chhhHh-hc--CcEEeCCHHH
Confidence 5678999999999999999999987522 264 6888887421 111111 01 0011247888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 007754 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 448 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (591)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 888874421 23688888888884 45677766653
No 172
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=80.91 E-value=4.2 Score=41.18 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=54.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH-Hhccc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKVI 410 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e-~V~~v 410 (591)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.++..++.-+.+ ....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~~-~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSCS-EEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCcc-hhcCCHHHHhhcc-
Confidence 6999999999999999988653 65 14788888741 1111111000000 01245666 6665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 446 (591)
+|++| ++.... -.+++++.+..+ .+.-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 454443 356777777653 3455665544
No 173
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=80.86 E-value=2.7 Score=41.23 Aligned_cols=91 Identities=13% Similarity=0.213 Sum_probs=57.2
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
.||.|+|+ |..|..+|..+.. .|. +++++|+. . +.+...+. ..-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~----~---~~~~~~~~----~g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIA----P---EGRDRLQG----MGIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCS----H---HHHHHHHH----TTCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECC----H---HHHHHHHh----cCCCcCCHHHHhcC-
Confidence 48999999 9999999998864 253 68888763 1 11111111 11111356677764
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (591)
.|++| ++..+.. .+++++.+... .+..+|.-+|+..
T Consensus 68 -aDvVi-~av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVV-LALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEE-ECSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEE-EcCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 88888 3433333 68888888754 3456777788854
No 174
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.84 E-value=3.4 Score=44.30 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=61.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (591)
..||.|+|+|..|..+|..|... |. +++++|+. . +.++..+..+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988652 64 57777763 1 112222221100 11123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478877 44444445677888776543 456788888854
No 175
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.64 E-value=1.3 Score=47.59 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhhCCCeeeeeecCCCccHHHHHHHHc-CCCeee--ccCCCchhHHHHHHHHHHHHHhC--------CCc
Q 007754 261 LLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIG--------GTL 329 (591)
Q Consensus 261 ~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr-~~~~~F--NDDiQGTaaV~LAgll~A~r~~g--------~~l 329 (591)
.+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-++..+.... ..-
T Consensus 134 ~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 3566666666677 54 4554343445567888886 456644 66666667666666666543321 012
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|||.||+..|..+.. .|+ ++.++|.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 34689999999999999988754 264 57777753
No 176
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=80.64 E-value=0.74 Score=47.82 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=63.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHHHhc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 408 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e~V~ 408 (591)
..||.|+|||..|.++|-.++.. |+ -..+.|+|.+-=..++-.-+|.+ ...|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~-~~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEH-GSLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHH-HGGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhh-hhhcccCCeEEEcCCHHH-hC
Confidence 46999999999999999988753 65 25799999731000000001222 12332211 01134543 55
Q ss_pred ccCCcEEE---eccCCCCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILI---GSSGVGRT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLI---G~S~~~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++| |....+|- | -+++++.+.++++.-+|+-.|||.
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv 141 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG 141 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc
Confidence 4 88888 33333331 1 246777888899999999999997
No 177
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=80.50 E-value=7.6 Score=40.05 Aligned_cols=119 Identities=12% Similarity=0.058 Sum_probs=78.5
Q ss_pred CCeeeccCCC---chhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007754 299 THLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (591)
Q Consensus 299 ~~~~FNDDiQ---GTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (591)
.+++.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 5666665322 2344467888887664 2467999999999999999999998753
Q ss_pred cCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007754 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (591)
Q Consensus 358 ~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (591)
.|+ +++.+|+.. .+. .+.. .-...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----------~~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----------SPE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----------CHH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----------chh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 253 688888641 110 1111 1112478898886 89888442 2246788888888
Q ss_pred HHcCCCCcEEEEcCC
Q 007754 433 MASFNEKPLILALSN 447 (591)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (591)
|. +..++.=.|.
T Consensus 245 mk---~gailIN~ar 256 (335)
T 2g76_A 245 CK---KGVRVVNCAR 256 (335)
T ss_dssp SC---TTEEEEECSC
T ss_pred CC---CCcEEEECCC
Confidence 85 5678887777
No 178
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.34 E-value=1.6 Score=42.15 Aligned_cols=97 Identities=12% Similarity=0.204 Sum_probs=56.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
+..||+|.|||-.|..+++.|++ .| .+++.++++. +.+.+.-..+.-+..+..++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~-----~g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTA-----QG-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 34689999998888888777764 25 3677777641 11221111111122222345566664
Q ss_pred cCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++|++|=+.+... ..|..+++++.+..-+-+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999996654321 12667888887666567887544
No 179
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.27 E-value=3.1 Score=44.65 Aligned_cols=98 Identities=13% Similarity=0.148 Sum_probs=59.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh-hhc-cccCCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 409 (591)
.||.|+|+|..|..+|..|... |. +++++|+.. +.+...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV-------SKVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH-------HHHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988652 64 578887631 11111111 000 001123578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
+ +||++| ++...+...+++++.+..+- +.-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 588777 44444445778887776543 356888888854
No 180
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=80.22 E-value=8.3 Score=39.26 Aligned_cols=122 Identities=15% Similarity=0.175 Sum_probs=76.9
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcChHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~ 353 (591)
..+.+.|----. +|=-+++-+|+..|. .+..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 356666654323 344467888877663 2346889999999999999999998753
Q ss_pred HHHhcCCChhhhcCeEEEEcC-CCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHH
Q 007754 354 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKE 428 (591)
Q Consensus 354 ~~~~~G~s~eeA~~~i~lvD~-~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~e 428 (591)
.| -+++.+|+ .. +. ...+ .+ ......+|.|+++. .|+++=.- ...++++++
T Consensus 168 ----~G-------~~V~~~d~~~~-------~~-~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FD-------MDIDYFDTHRA-------SS-SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TT-------CEEEEECSSCC-------CH-HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CC-------CEEEEECCCCc-------Ch-hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 25 36888887 41 10 0111 11 01112378888876 88877432 123678888
Q ss_pred HHHHHHcCCCCcEEEEcCC
Q 007754 429 VIEAMASFNEKPLILALSN 447 (591)
Q Consensus 429 vv~~Ma~~~erPIIFaLSN 447 (591)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888774 5667777776
No 181
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=80.22 E-value=11 Score=38.07 Aligned_cols=176 Identities=13% Similarity=0.091 Sum_probs=105.0
Q ss_pred hhHHHHHHHHHHHHHh----------------CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007754 310 TASVVLAGVVAALKLI----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (591)
Q Consensus 310 TaaV~LAgll~A~r~~----------------g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (591)
+|=-+++-+|+..|-. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 3445666677665521 1358899999999999999999988753 64 688888
Q ss_pred CCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 374 SKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 374 ~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
+..- .... ++ ...+|.|+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.
T Consensus 153 r~~~-------~~~~-----~~---~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSSV-------DQNV-----DV---ISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSCC-------CTTC-----SE---ECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred cccc-------cccc-----cc---ccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 7521 1111 11 23579999986 88877322 234678888888885 667888777633
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCC--CcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007754 450 SQSECTAEEAYTWSKGRAIFASGSPF--DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 527 (591)
Q Consensus 450 ~~aEct~edA~~wt~GraifAsGSPF--~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~v 527 (591)
.--|-.-.+|++ +|+.-.|.=--| +|. ..-=+..|+.+-|=++=| ....-.+.|...+++-|....
T Consensus 213 ~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFLK--ERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHHH--HCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhhh--hccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 222222233433 344322211111 111 111345688888876511 223455778887888877766
Q ss_pred Cc
Q 007754 528 TE 529 (591)
Q Consensus 528 ~~ 529 (591)
.-
T Consensus 281 ~~ 282 (290)
T 3gvx_A 281 EG 282 (290)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 182
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=79.86 E-value=0.98 Score=45.63 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=64.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc---ccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL---v~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
.||+|.|| |..|.-++..|+. .|.--..-...++++|...- ...... +|.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999998887654 24310000137999997420 000000 11111112322212224688888
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 007754 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 449 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (591)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 8999977665532 3556788888876 666888899996
No 183
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=79.84 E-value=4.5 Score=41.39 Aligned_cols=191 Identities=13% Similarity=0.085 Sum_probs=109.4
Q ss_pred CCCeeeccCC----CchhHHHHHHHHHHHHH----------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007754 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (591)
Q Consensus 298 ~~~~~FNDDi----QGTaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~ 357 (591)
..+++.|--- +..|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 3566655321 33455678888887763 25678999999999999999999988542
Q ss_pred cCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHH
Q 007754 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAM 433 (591)
Q Consensus 358 ~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~M 433 (591)
|+ +++.+|+..- ..+... .+ ....+|.|+++. .|+++=. ....++|+++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 64 5777886421 111111 01 011478888875 8888743 123468899988888
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCccccccchhhhHHHHHhCCcccC
Q 007754 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 512 (591)
Q Consensus 434 a~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~It 512 (591)
. +..++.=.|.-..--|-.-.+|++ .|+.-.|.=-=|++--. .+. .-=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~--pL~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQES--PLWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCC--hhhcCCCEEECCCCCc------ccH-H
Confidence 5 567887777644223333334443 46543332111111000 000 0124467888887662 222 2
Q ss_pred HHHHHHHHHHHHcccC
Q 007754 513 DDMLLAASEALAKQVT 528 (591)
Q Consensus 513 d~m~~aAA~aLA~~v~ 528 (591)
+.|...+++-|.....
T Consensus 286 ~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 286 AEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5676667777766654
No 184
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=79.79 E-value=1.5 Score=44.21 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=55.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~ 395 (591)
.|++.+++..| +.+++|+|||.+|.+|+..|.+. | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 35666665433 88999999999998888877653 4 478888774 22211111 1210
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC
Q 007754 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS 446 (591)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS 446 (591)
......+| . ++|++|-++..+ -.+.++.+. .+. +..+++=++
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 10111222 1 689999766544 146777554 343 355666553
No 185
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=79.76 E-value=0.86 Score=42.35 Aligned_cols=94 Identities=15% Similarity=0.164 Sum_probs=58.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc---c--ccCCCCCHHHH
Q 007754 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (591)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA---~--~~~~~~~L~e~ 406 (591)
||+|+| +|..|..+|..+.+ .| .+++++|++- + .++..++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----E---KAEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----H---HHHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----H---HHHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988754 25 3688888641 1 1111111110 0 011 2468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (591)
++. .|++|=+.. +. ..+++++.+....+..+|+-+||+.+
T Consensus 62 ~~~--~D~Vi~~~~-~~-~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-WE-HAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-HH-HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-hh-hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 876 888884433 32 35677777654334679999999764
No 186
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.63 E-value=2.1 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46999999999999999988653 32 1368888875
No 187
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.32 E-value=3.5 Score=44.81 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=61.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 409 (591)
.+|.|+|+|..|..+|..+... |. +++++|+.- +..+.....-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~-------~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV-------SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST-------HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5799999999999999988753 64 678887631 11222111111110 113678888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 007754 410 I-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (591)
Q Consensus 410 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (591)
+ +||++| ++-..+.-++++++.+..+ .+..||+-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 3 488776 4444444567788877654 4567888888844
No 188
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.13 E-value=1.7 Score=42.78 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 53 68888764
No 189
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.02 E-value=2.5 Score=41.92 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~-----~g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK-----MGH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHh-----CCC-------EEEEEeCC
Confidence 689999999999999998864 253 57888764
No 190
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=78.92 E-value=7.7 Score=40.31 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=96.8
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. .. ..... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~----~~----~~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN----SK----ERARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH----HH----HHHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC----CH----HHHHh---cCceEeCCHHH
Confidence 4678899999999999999999988642 64 688888641 00 00000 01112358999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEE------EecCCCC
Q 007754 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPF 475 (591)
Q Consensus 406 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~Grai------fAsGSPF 475 (591)
+++. .|+++=. ....++|+++.++.|. +..++.=.|.-..--|-.-.+|++ +|+.- |.. -|.
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl 283 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPI 283 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCC
Confidence 9987 8888743 2234789999998885 677888888744344554555654 45432 222 132
Q ss_pred CcceeCCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007754 476 DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 476 ~pv~~~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~v~ 528 (591)
++ .. .-=+..|+.+-|=+|-.. ..-.+.|...+++-|.....
T Consensus 284 ~~----~~--pL~~~~nvilTPHia~~t-----~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 284 LQ----GH--TLLRMENCICTPHIGYVE-----RESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CS----CC--GGGGCTTEEECCSCTTCB-----HHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CC--hhhcCCCEEECCCCCCCC-----HHHHHHHHHHHHHHHHHHHc
Confidence 21 00 012346888888775211 11224566666666666653
No 191
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.81 E-value=2.2 Score=41.89 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988653 5 367777764
No 192
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=78.78 E-value=2.5 Score=43.36 Aligned_cols=108 Identities=8% Similarity=0.135 Sum_probs=60.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh-----hhccc------cCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEPV 400 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~-----~fA~~------~~~~ 400 (591)
.||.|+|+|..|..+|..+..+ |.....-..+++++|+..-+. .++ .....++ .|-.. ..-.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~-----G~~~~~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN-----AKNNYLFENEVRMWIRDEFVN-GER-MVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH-----HHHCTTBCSCEEEECCSCC----CC-HHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHc-----CCccCCCCCeEEEEECChhhh-hHH-HHHHHHhcCcccccCCcccCcCCeEEE
Confidence 3799999999999999998765 310000004688888753210 000 0111100 00000 0011
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----C-CCCcEEEEcCCCCC
Q 007754 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----F-NEKPLILALSNPTS 450 (591)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 450 (591)
.++.|+++. .|++| ++... -..+++++.++. . .+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467788875 78766 33322 467888888875 3 34568888998654
No 193
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.77 E-value=2.2 Score=46.25 Aligned_cols=36 Identities=6% Similarity=-0.145 Sum_probs=25.6
Q ss_pred CcCCccccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007754 486 VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 521 (591)
Q Consensus 486 ~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~ 521 (591)
.||+.-|-.++|.+.=++.+....-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588888888889888777777233367777766643
No 194
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=77.97 E-value=5.5 Score=39.72 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=53.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc---cc-------c--CC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HE-------H--EP 399 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA---~~-------~--~~ 399 (591)
.||.|+|+|..|..+|..+... | .+++++|++. +.++..++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDA-------QRIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCH-------HHHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCH-------HHHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999887642 5 3588887741 00111111100 00 0 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEEcCC
Q 007754 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSN 447 (591)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSN 447 (591)
..++.++++. +|++|=+.. . -..+++++.++... +..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 787763322 2 23588888876543 3456666644
No 195
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=77.97 E-value=6.5 Score=38.69 Aligned_cols=106 Identities=12% Similarity=0.124 Sum_probs=62.2
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh----hhhhcc-ccCCCCC
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~----k~~fA~-~~~~~~~ 402 (591)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...-. ....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888877653 52 23677777653211 10111110 111111 2122246
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 403 L~e~V~~vkPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 446 (591)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 78888888899999877654321 366888888776666888644
No 196
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.54 E-value=5.3 Score=38.76 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=56.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. +.++..++.-..+ ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999998864 2641 3688888641 1111111000000 012467777762 3
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (591)
+|++| ++..+ -.+.++++.+..+ .+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 44433 2566777777543 4556777777744
No 197
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=77.53 E-value=3.5 Score=40.09 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=23.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (591)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3899999999999999988642 53 577776
No 198
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=77.33 E-value=3 Score=42.49 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=63.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCC--CCHHHHhccc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 410 (591)
||.|+|||..|..+|-+|+.. |+ -+.+.|+|..-=...+-.-+|.+- .+|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999888877642 55 257999997521111100113321 1221111110 122355665
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 411 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|++|=+.+.+ |- .-+++++.+++++...||+-.|||-
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 89888555544 32 1146778888999999999999997
No 199
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.19 E-value=2.8 Score=41.10 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred eEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 799999999999999988764 5 357788764
No 200
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=77.15 E-value=2.2 Score=45.31 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=20.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 007754 332 HRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~ 353 (591)
.||.|+|||+=|+.+|..+.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 3999999999999999999875
No 201
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=76.93 E-value=3.1 Score=43.24 Aligned_cols=107 Identities=17% Similarity=0.342 Sum_probs=63.0
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCCCHHHH
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 406 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~~L~e~ 406 (591)
+...||.|+|| |..|..+|-.++. .|+ ...+.|+|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865543 365 246999997410000000012221 12110 0011478888
Q ss_pred hcccCCcEEEeccCC---CCC-----------CCHHHHHHHHcCCCCcE-EEEcCCCC
Q 007754 407 VKVIKPTILIGSSGV---GRT-----------FTKEVIEAMASFNEKPL-ILALSNPT 449 (591)
Q Consensus 407 V~~vkPtvLIG~S~~---~g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 449 (591)
++. .|++|=+.+. +|- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 887 8988744433 231 22466777788888885 88899997
No 202
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=76.85 E-value=7.1 Score=39.25 Aligned_cols=99 Identities=9% Similarity=0.129 Sum_probs=59.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc-CCCCCHHHHhcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~-~~~~~L~e~V~~ 409 (591)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.+.. +.... .-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~----l~~~G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSA----LRKMGVKLTPHNKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHH----HHHHTCEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHH----HHHcCCEEeCChHHHhcc
Confidence 35899999999999999988653 531 11468888763 110 01111 11111 111367777775
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 007754 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (591)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (591)
.|++| ++..+ -..+++++.+... .+..+|.-+||..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77666 33333 4567788777653 34567888888764
No 203
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=76.76 E-value=2.6 Score=42.10 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+...||.|+|.|..|.++|..+... |. +++++|+.
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567899999999999999988753 63 57777763
No 204
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=76.64 E-value=9.4 Score=38.22 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 5899999999999999998764 63 478888874
No 205
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=76.55 E-value=3.2 Score=41.75 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 456999999999999999988753 63 57777763
No 206
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.54 E-value=15 Score=37.91 Aligned_cols=81 Identities=21% Similarity=0.403 Sum_probs=44.9
Q ss_pred HHHHHHHhC-CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc
Q 007754 318 VVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE 396 (591)
Q Consensus 318 ll~A~r~~g-~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~ 396 (591)
.+.|+...+ ..-.+++|+|+|||..|...+.+.. ..|. ++++.+|+. +.+..+++.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC------------HHHHHHHHH
Confidence 344443333 3446789999999877755444332 2364 578877652 233333332
Q ss_pred -------cCCCCCHHHHhcc----cCCcEEEeccCC
Q 007754 397 -------HEPVNNLLDAVKV----IKPTILIGSSGV 421 (591)
Q Consensus 397 -------~~~~~~L~e~V~~----vkPtvLIG~S~~ 421 (591)
.....++.+.|+. -+.|++|-+++.
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 0111345555543 368888877663
No 207
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=76.18 E-value=2.2 Score=41.76 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|..+|..+.. .|. +++++|+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-----~g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-----EGV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999988764 253 57888763
No 208
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=76.17 E-value=14 Score=38.12 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=118.1
Q ss_pred eeeeecCCCccHHHHHHHHcCCCeeeccCCC---chhHHHHHHHHHHHHHh------------------------C-CCc
Q 007754 278 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTL 329 (591)
Q Consensus 278 lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQ---GTaaV~LAgll~A~r~~------------------------g-~~l 329 (591)
+|+.--.+..|- ++-.--+..+.+.|---- .+|=-+++.+|+..|-. | ..|
T Consensus 88 ~I~~~~~G~d~i-d~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDNI-DIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCcc-cHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 366555555442 221122346777775332 34444788888887621 1 468
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|++- . . .....+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~--~---~~~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----S--D---GVERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----C--T---THHHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----c--h---hhHhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998754 264 588888641 1 1 111111 01123478888886
Q ss_pred cCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCccee
Q 007754 410 IKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEY 480 (591)
Q Consensus 410 vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifA-----sGSPF~pv~~ 480 (591)
.|+++=.- ...++++++.++.|. +..++.=.|+=..--|..-.+|++ +|+.-.| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---
Confidence 88887432 234678888888774 566888887744223333334443 4554322 2333221
Q ss_pred CCeeeCcCCccccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007754 481 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 527 (591)
Q Consensus 481 ~G~~~~p~Q~NN~yiFPGlglG~~~s~a~~Itd~m~~aAA~aLA~~v 527 (591)
.+.. --..+|+.+-|=++-. .....+.|...+++-+....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~~-----t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAWY-----SEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp TSST--TTTCSSEEECSSCTTC-----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 1111 1247899999987632 12223445555555555554
No 209
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=76.07 E-value=1.3 Score=44.17 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=58.9
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh----hhc-------c
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----PWA-------H 395 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~----~fA-------~ 395 (591)
+++..+|+|.|| |-.|-.|++.|++ .| .+++.+++..- -.+.+. .+. .
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~--------~~~~~~~~~~~l~~~~v~~~~ 66 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP--------RSPSKAKIFKALEDKGAIIVY 66 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC--------CCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC--------CChhHHHHHHHHHhCCcEEEE
Confidence 455679999999 8888888887754 25 36888877520 011111 111 1
Q ss_pred -ccCCCCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 007754 396 -EHEPVNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 443 (591)
Q Consensus 396 -~~~~~~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 443 (591)
|..+..+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 11222468888887779999988775432 3788999988766 455554
No 210
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.80 E-value=3.1 Score=39.87 Aligned_cols=36 Identities=25% Similarity=0.285 Sum_probs=26.7
Q ss_pred CcccceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGA-GE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GA-Gs-Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.++++++||.|| |+ .|..+|+.+++ .|. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EGA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TTC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CCC-------EEEEecCC
Confidence 478899999999 64 77777777654 363 58888774
No 211
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.74 E-value=3.8 Score=37.15 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=28.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 14 368888874
No 212
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=75.61 E-value=1.8 Score=46.44 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=32.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45788999999999999999999864 87 799999986
No 213
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.55 E-value=3.7 Score=40.78 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|.++|..+.. .|. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~-----~G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTE-----WPG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTT-----STT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHH-----CCC-------eEEEEeCC
Confidence 589999999999999998864 253 57888864
No 214
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=75.12 E-value=5.8 Score=37.05 Aligned_cols=97 Identities=13% Similarity=0.115 Sum_probs=55.1
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh---h-hhcc-ccCCC
Q 007754 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---K-PWAH-EHEPV 400 (591)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k---~-~fA~-~~~~~ 400 (591)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. +.+...+ . .+.. |..
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~-------~~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE-------EQGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG-------GGHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh-------HHHHHHHhCCCceEEEcccH--
Confidence 4578899999998 7777777777654 26 3688887741 1121111 1 1111 111
Q ss_pred CCHHHHhcccCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 401 NNLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 401 ~~L~e~V~~vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.++.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 76 ~~~~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCCGGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 56777777 49999977765421 0345666666555555666544
No 215
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=74.84 E-value=7.5 Score=39.91 Aligned_cols=195 Identities=14% Similarity=0.104 Sum_probs=108.0
Q ss_pred CCCeeeccCCC---chhHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcChHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (591)
Q Consensus 298 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~ 354 (591)
..+.+.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 35555554221 2444567777776652 2456889999999999999999998753
Q ss_pred HHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007754 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (591)
Q Consensus 355 ~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 430 (591)
.|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~-------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL-------DTQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC-------CHHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC-------cHhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 264 6888887521 0111111111 12379999886 88887542 23468999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCc-------CCccccccchhhhHHH
Q 007754 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLGL 503 (591)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv~~~G~~~~p-------~Q~NN~yiFPGlglG~ 503 (591)
+.|. +..+|.=.|+-..--|-.-.+|+ .+|+.-.|.=-=|++-.+ .....| =+..|+.+-|=+|-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 8885 67788888774322232233444 355544332111111100 000001 1235777777765321
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccC
Q 007754 504 VISGAIRVHDDMLLAASEALAKQVT 528 (591)
Q Consensus 504 ~~s~a~~Itd~m~~aAA~aLA~~v~ 528 (591)
..-.+.|...+++-|.....
T Consensus 298 -----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 -----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHHHc
Confidence 11234555556666655554
No 216
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=74.80 E-value=1.4 Score=45.58 Aligned_cols=108 Identities=18% Similarity=0.258 Sum_probs=65.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc--CCCCCHHH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 405 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~--~~~~~L~e 405 (591)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+. +
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~-~ 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDY-S 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSG-G
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCH-H
Confidence 34567999999999999999888642 54 267999997410000000012211 1232210 112344 3
Q ss_pred HhcccCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 406 AVKVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 449 (591)
+++. .|++|=+.+. +|- | -+++.+.|++++..-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 5665 8888734333 331 2 246778888999999999999997
No 217
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=74.69 E-value=1.8 Score=44.31 Aligned_cols=88 Identities=22% Similarity=0.317 Sum_probs=52.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc----ccCCCCCHHHHhc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAVK 408 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~----~~~~~~~L~e~V~ 408 (591)
||+++|||-.|--+|+.|.+ ..++.++|... ++++.. ++++. +..+..+|.+.++
T Consensus 18 kilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~-~~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKV-KEFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHH-TTTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHH-hccCCcEEEecCCHHHHHHHHh
Confidence 79999999888777766531 13577777631 112221 12222 2223346888887
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
. .|++|-+ .|.-|...++++-.+... . +|-+|-
T Consensus 77 ~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 77 E--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp T--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred C--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 5 7888854 455688899888665433 2 555664
No 218
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.46 E-value=3.9 Score=41.28 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|.++|..+... |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988653 51 368888875
No 219
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=74.24 E-value=7.3 Score=41.49 Aligned_cols=71 Identities=25% Similarity=0.366 Sum_probs=46.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
--|++|+|+ |-+|.|-++.+... |.. ..++...|.+= ..+.. + + +.+..
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~--------------~---~-~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG--------------P---F-DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS--------------C---C-THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC--------------c---h-hhHhh
Confidence 468999999 99999999877542 641 12566666530 01100 0 1 23443
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 007754 410 IKPTILIGSSGV----GRTFTKEVIEAM 433 (591)
Q Consensus 410 vkPtvLIG~S~~----~g~Ft~evv~~M 433 (591)
.|++||+--. |-++|+|+|+.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999988654 678999999988
No 220
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=74.10 E-value=5.3 Score=39.90 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=27.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+-.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 3446899999999999999988753 63 67888874
No 221
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=74.08 E-value=2.9 Score=41.33 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=28.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 35689999999999999998854 253 2799999874
No 222
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.46 E-value=6.8 Score=38.62 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCc---CCCchhhhhhcc-ccCCCC
Q 007754 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 401 (591)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~---~~l~~~k~~fA~-~~~~~~ 401 (591)
.++++.+|+|.|| |-.|..+++.|++ .| -+++++|+..- ... ..+. ...+.. |..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFAT---GKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCSS---SCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCCc---cchhhhhccC--CceEEEeeCCCHH
Confidence 4578889999998 7777667666643 25 36888887310 100 1111 111111 212223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC--C-----------CHHHHHHHHcCCCCcEEEEcC
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRT--F-----------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~--F-----------t~evv~~Ma~~~erPIIFaLS 446 (591)
++.++++.+++|++|=+.+.... . +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 56777876679999988775532 0 345677776655567888644
No 223
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=73.25 E-value=17 Score=37.32 Aligned_cols=111 Identities=14% Similarity=0.137 Sum_probs=71.3
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
|..|.+.++.|+|.|..|.-+|+.+... |+ +++.+|+. .+ +...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~----~~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR----EDLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC----HHHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc----hhhhhcC----ceecCHHH
Confidence 4568899999999999999999887543 64 57777753 11 1111111 12257999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcc--cCCcEEEe
Q 007754 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW--SKGRAIFA 470 (591)
Q Consensus 406 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~w--t~GraifA 470 (591)
.++. .|+++=. ...-++|+++.++.|. +..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 8888732 2335799999999995 5566665544 44444444321 35665433
No 224
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=72.74 E-value=2.7 Score=47.47 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.||+++|+|..|+-+|+.|+.+ |+ .+|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 47789999999999999999999875 87 799999987
No 225
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=72.66 E-value=3.2 Score=41.28 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=25.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-||+|+|||.||+-.|-.|.+ .|+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 389999999999999988765 376 46677653
No 226
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.58 E-value=2.6 Score=41.20 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999888642 53 57888764
No 227
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=72.55 E-value=1.7 Score=46.64 Aligned_cols=182 Identities=16% Similarity=0.218 Sum_probs=96.9
Q ss_pred cccccccCcchHHHHHhcCCCCCeeEEEEec--------------------CceeecCCCCCCCccccchhhHHHHHH--
Q 007754 159 GLYISLKEKGKILEVLKNWPERSIQVIVVTD--------------------GERILGLGDLGCQGMGIPVGKLALYTA-- 216 (591)
Q Consensus 159 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LYta-- 216 (591)
|.|++..|-..|.++|+.. .++++++.| |+++=-+-++|-.-.-|.++....++|
T Consensus 177 G~~~~~~D~~eik~lL~~~---Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIESF---GLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHTT---TCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHc---CCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 7777777777888888854 688888854 333333444443333444454443322
Q ss_pred ---hcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhhCCCeeeeeecCCCccHHHHH
Q 007754 217 ---LGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL 293 (591)
Q Consensus 217 ---~gGI~P~~~LPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL 293 (591)
=-|+. .-.+|. .+|+ +-.++|+.++.+.+|- ..| +.+
T Consensus 254 Le~~~GiP-~~~~~~----------------p~G~-----------~~T~~~l~~la~~~g~----~~~--------~~i 293 (458)
T 3pdi_B 254 LAERTGVP-DRRFGM----------------LYGL-----------DAVDAWLMALAEISGN----PVP--------DRY 293 (458)
T ss_dssp HHHHSCCC-EEEECC----------------SCHH-----------HHHHHHHHHHHHHHSS----CCC--------HHH
T ss_pred HHHHHCCC-EEecCC----------------CcCH-----------HHHHHHHHHHHHHHCC----chH--------HHH
Confidence 12443 111111 1121 2268888888888863 122 223
Q ss_pred HHHcCCCeeeccCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007754 294 AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (591)
Q Consensus 294 ~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (591)
++.|.+ ++.++.-....|.+.|++|+|.+.-..|+++.|.+ .|+. -+.++-
T Consensus 294 ~~er~r------------------~~~~~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~~~ 344 (458)
T 3pdi_B 294 KRQRAQ------------------LQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAH------TVAAVV 344 (458)
T ss_dssp HHHHHH------------------HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCE------EEEEEE
T ss_pred HHHHHH------------------HHHHHHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCE------EEEEEE
Confidence 343321 12222222245778999999999999999998843 4872 222221
Q ss_pred CCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcccCCcEEEeccC
Q 007754 374 SKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSG 420 (591)
Q Consensus 374 ~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~ 420 (591)
.. ..+.+... +... -..+...|++.++..+||.+||-|-
T Consensus 345 ~~------~~~~~~~~--~~~~v~~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 345 PA------RAAALVDS--PLPSVRVGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp SS------CCSCCTTT--TSSCEEESHHHHHHHHHHHHTCSEEEECTT
T ss_pred CC------CChhhhhC--ccCcEEeCCHHHHHHHHHhcCCCEEEEChh
Confidence 11 11111111 0000 0012234778889999999999654
No 228
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=72.36 E-value=7.4 Score=37.63 Aligned_cols=90 Identities=10% Similarity=0.106 Sum_probs=48.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 412 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkP 412 (591)
||.|+|+|..|..+|..+... |. +++++|++. +.+...++.-..+ ....++.++ + ++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~-------~~~~~~~~~g~~~-~~~~~~~~~-~--~~ 58 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQQ-------STCEKAVERQLVD-EAGQDLSLL-Q--TA 58 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGG-T--TC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECCH-------HHHHHHHhCCCCc-cccCCHHHh-C--CC
Confidence 799999999999999887642 53 688887641 1111111000000 012345555 3 36
Q ss_pred cEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 007754 413 TILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (591)
Q Consensus 413 tvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (591)
|++| ++..+ -..+++++.+..+ .+..+|.-+||
T Consensus 59 D~vi-~av~~-~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 59 KIIF-LCTPI-QLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp SEEE-ECSCH-HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred CEEE-EECCH-HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 7666 22222 2456667666543 23445555655
No 229
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=72.11 E-value=6.9 Score=38.10 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=56.4
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC--CCchh----hhhhcc-ccCCCC
Q 007754 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 401 (591)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~--~l~~~----k~~fA~-~~~~~~ 401 (591)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++. +..+ .+... +..+.. |..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4678999998 7777777776654 25 3688887642 1000 00000 011111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEEcC
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 446 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 446 (591)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57778888889999988875421 0 3345565554443 67887644
No 230
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=71.93 E-value=8.6 Score=37.33 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=44.2
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
..+++++++||.||++ ||...|+..+.+ .|. +++++|++.- .+......+.-|..+..++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 455555555554 363 6888876421 111111112112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007754 406 AVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (591)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66555 899999766643
No 231
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=71.34 E-value=5.1 Score=36.88 Aligned_cols=96 Identities=10% Similarity=0.139 Sum_probs=52.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
.||+|.|| |-.|..+++.|.+ .| .++++++++. ++...+.+.-..+.-|..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666555543 25 4788888752 11111211111111122223457788875
Q ss_pred CCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEEc
Q 007754 411 KPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILAL 445 (591)
Q Consensus 411 kPtvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaL 445 (591)
+|++|=+.+... ..+..++++|.+..-+.+||.=
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 899997765431 0245577777765555566643
No 232
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=70.93 E-value=12 Score=36.78 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=58.4
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh-hhhhcc-ccCCCCCHH
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 404 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~-k~~fA~-~~~~~~~L~ 404 (591)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+... +..+.. |..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999996 7677777766654 25 4688888742 1111112110 111111 212223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78877789999987765432 0345777777665567888544
No 233
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=70.88 E-value=3.3 Score=40.26 Aligned_cols=35 Identities=11% Similarity=0.328 Sum_probs=28.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 34689999999999999988864 364 689999864
No 234
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=70.65 E-value=9.3 Score=37.56 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=57.4
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+.. +.-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4577889999998 8888888777764 26 3677777642 11 11111 1112222245777
Q ss_pred HhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 406 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 406 ~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 446 (591)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999777654211 345788888777778888655
No 235
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=70.56 E-value=7.7 Score=37.18 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=23.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
||.|+|+|..|..+|..+... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999988652 53 5776665
No 236
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.52 E-value=5.5 Score=40.53 Aligned_cols=40 Identities=23% Similarity=0.380 Sum_probs=26.3
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 007754 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
...++..|||++||..+.. --.....|+....|+|+=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 4568889999999986643 112222355567899975555
No 237
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=69.27 E-value=5.2 Score=36.95 Aligned_cols=93 Identities=14% Similarity=0.138 Sum_probs=53.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcC-CCchh-----hhhhcc-ccCCCCCH
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD-SLQHF-----KKPWAH-EHEPVNNL 403 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~-~l~~~-----k~~fA~-~~~~~~~L 403 (591)
++|+|.|| |-.|..+++.|++ + .| -++++++++. + .++.. +..+.. |..+..++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~---~-~g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT---Y-TD-------MHITLYGRQL-------KTRIPPEIIDHERVTVIEGSFQNPGXL 67 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH---H-CC-------CEEEEEESSH-------HHHSCHHHHTSTTEEEEECCTTCHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHh---c-CC-------ceEEEEecCc-------cccchhhccCCCceEEEECCCCCHHHH
Confidence 45999996 7777777777652 1 36 3688887741 1 12211 001111 21222457
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEE
Q 007754 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 444 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFa 444 (591)
.++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 68 ~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 68 EQAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 777874 899997776443226778888876554556654
No 238
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=69.18 E-value=13 Score=36.04 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=57.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcc
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (591)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+... +. ...+.. |.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888877764 25 368888875 22111 22 111111 222 345677777
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++|++|=+.+..+. -|..+++++.+.+-+-+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988775432 1467888888776666888544
No 239
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.05 E-value=2.2 Score=37.50 Aligned_cols=32 Identities=16% Similarity=0.407 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 479999999999999998865 25 368889874
No 240
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=68.59 E-value=14 Score=38.10 Aligned_cols=84 Identities=24% Similarity=0.351 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHHHHhCCCcccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch
Q 007754 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (591)
Q Consensus 310 TaaV~LAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~ 388 (591)
-.-+|-.|++--++..+.+++..++|++|.+ -.|.-+|-||.. .|. .+.++.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 3456778999999999999999999999975 467788877754 243 35555332
Q ss_pred hhhhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007754 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 431 (591)
Q Consensus 389 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 431 (591)
.++|.+.+++ +|+||...+.++.++.++|+
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357888886 99999999999999999987
No 241
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=68.04 E-value=15 Score=34.11 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=54.1
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-cccCCCCCHHHH
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 406 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-~~~~~~~~L~e~ 406 (591)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+. -|-.+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 45678999996 66666666666542 52 13788888752 11111111111111 121222456666
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 407 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 58999988765310 1345666666554455666433
No 242
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=67.94 E-value=4.9 Score=40.48 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=28.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+++..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 364 6888887543
No 243
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=67.87 E-value=13 Score=36.86 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=25.6
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 68888764
No 244
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=67.87 E-value=4.7 Score=38.20 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+..|..|.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999988865 25 368999974
No 245
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=67.73 E-value=13 Score=38.98 Aligned_cols=110 Identities=11% Similarity=0.104 Sum_probs=60.1
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhc
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++- .. ..-.+.++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~-~g---~~~~~~~~ 63 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERH-TG---SLNDEWLM 63 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEE-ES---SCCHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEE-EC---CCcHHHhc
Confidence 567899999999999999866543 374 57788886431100 0121 111110 00 11246665
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 473 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGS 473 (591)
.++.+|=.++.+- -.+++..+.. ...|++ +. .|-++...+.+.|-.|||
T Consensus 64 --~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~-------~~----~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 64 --AADLIVASPGIAL-AHPSLSAAAD--AGIEIV-------GD----IELFCREAQAPIVAITGS 112 (439)
T ss_dssp --TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE-------CH----HHHHHHHCCSCEEEEECS
T ss_pred --cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE-------EH----HHHHHHhcCCCEEEEECC
Confidence 4787775555542 2566665443 233443 11 233444456778888886
No 246
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=67.37 E-value=2.9 Score=43.37 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=64.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc---cccCCCCCHHHH
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA---~~~~~~~~L~e~ 406 (591)
.+.||+|+|+|.+|-.+|+.|.+. .++.+.|+. .++ ++.....+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998877531 357888773 111 222111111 011122468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcc
Q 007754 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 478 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~wt~GraifAsGSPF~pv 478 (591)
++. +|++|=+.. . .+..+++++-.+ ..=.++-+|.-....+.-.++|-+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 899997632 2 356677665433 222356677622111122334432 453 33455556664
No 247
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.88 E-value=4 Score=42.41 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+||||+|+|.||+..|..|.+. +- .-+|.|+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 248
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=66.40 E-value=5.3 Score=38.51 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+|||+|||.||+..|..+.. .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3589999999999999987754 253 68899886
No 249
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=66.24 E-value=1.9 Score=44.51 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=66.1
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC---cccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 332 ~riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G---Lv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
.||+|.| ||..|.-+|-+|+. .|+--++-.-.+.|+|... .+.-... +|.+.-.+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 4899999 79999988887764 2541111111389999852 1111101 13322223333222224678888
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEEcCCCC
Q 007754 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 449 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 449 (591)
+. .|++|=+.+.+ |- ..+++++++.+++.+-+ |+-.|||.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 86 89888444433 21 24678888888888774 99999996
No 250
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=66.10 E-value=4.1 Score=46.23 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+..||+|+|+|..|+-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 688999999999999999988764 87 799999987
No 251
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=66.09 E-value=13 Score=35.29 Aligned_cols=78 Identities=13% Similarity=0.212 Sum_probs=43.4
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e 405 (591)
..++++.++||.||++ ||...++..+.+ .| -+++++|++- + .+.... .+.-|..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----G---APKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----C---CCTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---HHHHhc-CeeccCCCHHHHHH
Confidence 3468889999999753 455555555554 36 3688888741 1 122111 12112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007754 406 AVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (591)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999777654
No 252
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=66.04 E-value=5 Score=39.47 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999888765 375 46677764
No 253
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=65.86 E-value=5.5 Score=38.14 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+|+|+|||.||+..|..+.+ .|. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4699999999999999988765 253 58999997
No 254
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=65.84 E-value=6.1 Score=38.18 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=23.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
||.|+|+|..|..+|..+. + |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-----~-g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-----R-RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-----T-TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-----C-CC-------eEEEEeCC
Confidence 7999999999999998774 2 42 47778763
No 255
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=65.83 E-value=5.2 Score=40.96 Aligned_cols=36 Identities=31% Similarity=0.476 Sum_probs=28.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 37 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKH 37 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCC
Confidence 589999999999999998865 3642 37999998753
No 256
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.82 E-value=6.8 Score=33.05 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999887754 25 368888874
No 257
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=65.73 E-value=9.9 Score=39.09 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=29.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999998865 364 2469999886543
No 258
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=65.64 E-value=6.7 Score=37.64 Aligned_cols=86 Identities=10% Similarity=0.231 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
||+|.|| |-.|..+++.|. . | .+++.+|++.-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899998 777777776654 2 4 4688887753111 011111235777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 412 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+|++|=+.+.... .+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988775431 14567777765544 5887654
No 259
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=69.08 E-value=1.3 Score=42.09 Aligned_cols=92 Identities=12% Similarity=0.093 Sum_probs=52.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhc
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
+.+.||.|+|+|..|..+|..+... |. +++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G~-------~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----GY-------SVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999887643 42 4666766411 1 111 111111125566665
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
. .|++| ++..+. -++++++ ++...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 3455552 33233456888888876
No 260
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=65.40 E-value=5.5 Score=38.82 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999987754 25 3689999864
No 261
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.00 E-value=4.6 Score=38.74 Aligned_cols=90 Identities=11% Similarity=0.138 Sum_probs=52.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 389999999999999887643 24 467888763 1 1122221111 11223578888874
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
+|++|=+ ..+ ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~-v~~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILG-IKP-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEEC-SCG-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEE-eCc-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 8887733 323 34567776653 334666665533
No 262
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=64.57 E-value=4.9 Score=39.85 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-----GL-------STWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 5899999999999999988753 63 57778764
No 263
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=64.53 E-value=5.8 Score=40.71 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=29.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCCC
Confidence 45789999999999999998865 3642 46999988643
No 264
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=64.53 E-value=8.8 Score=36.50 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=55.4
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
.++..+|+|.|| |-.|..+++.|.+ .|... ....- .+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 366789999996 7788777777654 25300 00000 011000 011122357788
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 407 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1335788887776667888544
No 265
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.42 E-value=6.4 Score=40.62 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999881 123 479999886443
No 266
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=64.38 E-value=6.6 Score=35.03 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-+++|+|+|.+|+-.|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999998887652 5 478899875
No 267
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=64.22 E-value=25 Score=34.84 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=60.5
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch-hhhhhcc-ccC-CCCCH
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~-~k~~fA~-~~~-~~~~L 403 (591)
.++..+|+|.|| |-.|..+++.|++. .| .+++.+|+.. ++...+.. ....+.. |.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999996 88888888777642 24 4788888742 11111111 1111211 212 22357
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 007754 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 404 ~e~V~~vkPtvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 777874 999997665432 23567899988877 78888765
No 268
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=64.20 E-value=4.7 Score=38.96 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888652 64 58888884
No 269
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=64.14 E-value=32 Score=37.37 Aligned_cols=120 Identities=19% Similarity=0.127 Sum_probs=76.4
Q ss_pred CCCeeeccCCCc---hhHHHHHHHHHHHHH------------------hCCCcccceEEEeCcChHHHHHHHHHHHHHHH
Q 007754 298 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (591)
Q Consensus 298 ~~~~~FNDDiQG---TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~ 356 (591)
..+.+.|----. +|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 456666653322 344478888887653 2467899999999999999999998754
Q ss_pred hcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007754 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 432 (591)
.|+ +++.+|+.- .+ ...+ .+ .-...+|.|+++. .|+++=.. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~~----~~a~-~~---g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----SP----ARAA-QL---GIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----CH----HHHH-HH---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----Ch----hHHH-hc---CcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 688888641 11 1111 11 1111278898886 88887442 2345777777766
Q ss_pred HHcCCCCcEEEEcC
Q 007754 433 MASFNEKPLILALS 446 (591)
Q Consensus 433 Ma~~~erPIIFaLS 446 (591)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 63 566887777
No 270
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=64.12 E-value=8.3 Score=38.94 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4689999999999999987754 364 6889998743
No 271
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=63.83 E-value=6.7 Score=40.10 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=63.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCC--CCCHHHHhcc
Q 007754 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (591)
Q Consensus 333 riv~~G-AGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~--~~~L~e~V~~ 409 (591)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. ..+..-+|.+. ++-..-.. ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 799999998777542 143 268999999741 11110012211 11000000 0246678876
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 007754 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (591)
Q Consensus 410 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (591)
.|+.|=+.+.+ |- .-+++++.+.+++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 89888555443 31 1246677788899999999999997
No 272
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=63.80 E-value=5.6 Score=38.78 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999987764 25 368999987
No 273
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=63.80 E-value=4 Score=44.82 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 357789999999999999999998864 87 799999986
No 274
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=63.70 E-value=6.7 Score=33.88 Aligned_cols=34 Identities=21% Similarity=0.453 Sum_probs=26.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+..+|+|+|+|..|..+|+.+.. .|. +++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g~-------~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AGK-------KVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEECC
Confidence 34689999999999999988865 253 68888874
No 275
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.63 E-value=22 Score=34.73 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=57.9
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhh----------cc-ccC
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 398 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~f----------A~-~~~ 398 (591)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. . ........+ .. |..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666665543 26 3688887641 1 122211111 01 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 399 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+..++.++++..++|++|=+.+.... -|..+++.|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357778887789999987765421 1446788888777678888654
No 276
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.45 E-value=6 Score=40.37 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999998876211 13 4688888764
No 277
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=63.26 E-value=9 Score=37.14 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=54.4
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
..+|+|.|| |-.|..+++.|++ .|. +++++++. ... ++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 7777777776643 252 46666543 111 121 11356777876
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+++|++|=+.+..+. .|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 689999988776531 2345677777666567888654
No 278
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=63.07 E-value=5.6 Score=39.58 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=27.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
++-.|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 34689999999999999988765 364 577888765
No 279
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=62.97 E-value=11 Score=36.52 Aligned_cols=79 Identities=14% Similarity=0.185 Sum_probs=43.0
Q ss_pred CcccceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc------ccC
Q 007754 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 398 (591)
Q Consensus 328 ~l~d~riv~~GAG-s--Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~------~~~ 398 (591)
.+++.++||.||. . .|..||+.++ + .| -+++++|+.-+ .+.+...+..+.+ |..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~----~-~G-------~~V~~~~r~~~-----~~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMH----R-EG-------AELAFTYVGQF-----KDRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHH----H-TT-------CEEEEEECTTC-----HHHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHH----H-cC-------CEEEEeeCchH-----HHHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 4445555554 3 36 36888887631 0112221111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCCC
Q 007754 399 PVNNLLDAVKVI-----KPTILIGSSGVGR 423 (591)
Q Consensus 399 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 423 (591)
+..++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455555554 7999997777553
No 280
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=62.85 E-value=6.3 Score=41.03 Aligned_cols=42 Identities=26% Similarity=0.376 Sum_probs=31.1
Q ss_pred HhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 324 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 324 ~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988764 25 36788877644
No 281
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=62.85 E-value=22 Score=34.35 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=52.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
+|+|.|| |-.|..+++.|.+ .| .++.+++.. .++.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 6667666666543 23 344444321 11111111111111113333 67888887 5
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 412 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 412 PtvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (591)
+|++|-+.+.... + |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234778887777778998655
No 282
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=62.63 E-value=10 Score=36.19 Aligned_cols=37 Identities=19% Similarity=0.226 Sum_probs=24.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 57788999999843 444555555554 363 58888764
No 283
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=62.62 E-value=7 Score=38.15 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+..|+|+|||.+|+..|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988865 364 68999987
No 284
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=62.54 E-value=7.3 Score=39.71 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 375 2377777653
No 285
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.53 E-value=7.8 Score=39.31 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=27.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
...+|+|+|||.||+..|..|.+ .|+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 45689999999999999988865 364 577777653
No 286
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=62.45 E-value=6.4 Score=40.48 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=28.9
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3445677999999999999999988753 4 147899998
No 287
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=62.29 E-value=6.6 Score=39.86 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.6
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999987754 364 688898864
No 288
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=62.10 E-value=7.1 Score=38.78 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----ENK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCCC
Confidence 4689999999999999998865 263 6999998643
No 289
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=62.04 E-value=6.6 Score=39.64 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 578888754
No 290
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=61.82 E-value=7.3 Score=38.62 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NNI-------SCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecCC
Confidence 35789999999999999887754 253 688999864
No 291
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=61.64 E-value=7.5 Score=39.44 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=27.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.-+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ-----SGI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345689999999999999988865 364 577888754
No 292
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=61.45 E-value=15 Score=35.64 Aligned_cols=98 Identities=13% Similarity=0.168 Sum_probs=55.9
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhccc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (591)
+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. |..+..++.++++..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 66 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQE 66 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhhc
Confidence 7999986 7777777776654 25 3688887631 110011211 111111 212223567777756
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 79999988775421 1345677777665567888644
No 293
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=61.07 E-value=7.4 Score=38.74 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 264 599999874
No 294
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=60.93 E-value=7.3 Score=37.83 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988764 263 68899984
No 295
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=60.91 E-value=11 Score=38.23 Aligned_cols=88 Identities=11% Similarity=0.088 Sum_probs=52.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-cCCCCCHHHHh
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~~~~~~L~e~V 407 (591)
|+..+|.|+|+|..|..+|..+... |. +++++|+.. . .. ...++. .-...++.|++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~----~------~~-~~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG----S------AT-VAKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT----C------HH-HHHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh----H------HH-HHHHHHCCCEEccHHHHH
Confidence 3456899999999999999887642 64 577777642 1 00 011111 00112788888
Q ss_pred cccCCcEEEeccCCCCCCCHHHHH-HHHcCC-CCcEEE
Q 007754 408 KVIKPTILIGSSGVGRTFTKEVIE-AMASFN-EKPLIL 443 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g~Ft~evv~-~Ma~~~-erPIIF 443 (591)
+. +|++| ++..... .+++++ .++.+. +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 75 88877 5554433 378887 765433 334444
No 296
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.69 E-value=8.8 Score=33.82 Aligned_cols=34 Identities=6% Similarity=0.154 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|+|..|..+++.|.. .| .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~-----~g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQ-----RG-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 45689999999999999998864 25 468888874
No 297
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=60.33 E-value=7.6 Score=38.59 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=28.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~-----~G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK-----QGV-------KTLLVDAFDPP 38 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999998865 263 69999987543
No 298
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=60.19 E-value=8.9 Score=38.31 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988751 151 3699999875
No 299
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=60.18 E-value=7.3 Score=37.88 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 588888763
No 300
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=59.83 E-value=8 Score=37.21 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+..|..+.+ .|. +++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988764 263 279999985
No 301
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=59.76 E-value=8.1 Score=36.90 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEE-EcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~l-vD~~ 375 (591)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 302
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=59.74 E-value=9.4 Score=38.26 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.++..+.+++..... .+++++|.|||..|...+.+... .|. ++++.+|+
T Consensus 149 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 197 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDP 197 (343)
T ss_dssp HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 444445666623333 88999999998777666554432 363 47888875
No 303
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=59.60 E-value=8.4 Score=39.14 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+|+|+|||.||+..|..|.+. |. ++.+++++.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999988753 63 677887753
No 304
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=59.54 E-value=5.5 Score=38.46 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988764 253 57788854
No 305
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=59.50 E-value=13 Score=41.06 Aligned_cols=38 Identities=11% Similarity=0.256 Sum_probs=30.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
+++.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCCC
Confidence 567899999999999999987754 364 79999998443
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=59.48 E-value=21 Score=32.44 Aligned_cols=50 Identities=18% Similarity=0.215 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.++..+.+++....--.++++++.|| |..|..+++++.. .|. +++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-----IGA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH-----HTC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH-----cCC-------EEEEEeCC
Confidence 34444455544444446789999994 7777777766543 252 57777763
No 307
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=59.28 E-value=8.4 Score=45.63 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999876 87 899999986
No 308
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=59.11 E-value=7.8 Score=40.52 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
||||+|+|.||+-.|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999877643 53 13689998754
No 309
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=59.01 E-value=9 Score=40.67 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999988653 63 58899885
No 310
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=58.97 E-value=4.7 Score=41.09 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=52.5
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhc
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
....||.|+|+|..|...+..+.. +..|. +-+.++|++ . +......+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~---~~~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----A---GRAQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----T---THHHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----H---HHHHHHHHHhCCCCeeeCCHHHHhc
Confidence 445699999999988766555431 11121 224466653 1 1122233333111122478999999
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
.-++|+++ +++.. .+..+++....+. .++|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 87899988 55544 4555555554432 255554
No 311
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=58.75 E-value=20 Score=33.53 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=25.3
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..|+++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 444455555554 36 368888874
No 312
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=58.70 E-value=8.9 Score=40.04 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999987754 25 379999986
No 313
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=58.59 E-value=8.5 Score=39.36 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=29.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988765 364 379999987553
No 314
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=58.42 E-value=27 Score=33.63 Aligned_cols=76 Identities=11% Similarity=0.044 Sum_probs=41.8
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHh
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V 407 (591)
++++++||.||++ ||...++..+.+ .| -+++++|++- . .+...+..+.. |-.+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----K---PSADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---CCSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----h---hcccCceEEEEccCCCHHHHHHHH
Confidence 5678999999753 444445555544 36 3688888751 1 11111111211 222223455556
Q ss_pred ccc-----CCcEEEeccCCC
Q 007754 408 KVI-----KPTILIGSSGVG 422 (591)
Q Consensus 408 ~~v-----kPtvLIG~S~~~ 422 (591)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 554 799999776643
No 315
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=58.16 E-value=9.5 Score=36.16 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=25.7
Q ss_pred CCCcccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 326 g~~l~d~riv~~GAG---sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..++++.++||.||+ -.|..+|+.++ + .| -+++++|+.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~----~-~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACK----R-EG-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHH----H-TT-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHH----H-cC-------CCEEEEecc
Confidence 356889999999985 34444555554 3 36 368888875
No 316
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=57.91 E-value=9.9 Score=41.29 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=29.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 345789999999999999998864 364 589999874
No 317
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=57.86 E-value=14 Score=35.42 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=56.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhccc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (591)
||+|.|| |-.|..+++.|.+ +.| .++..++++.- +...+.+....+.. |-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~----~~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIA----NHI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHH----TTC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhh----CCC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 8888888777543 114 35777766421 10111111111111 22222467788875
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999987765321 2467888888777677888544
No 318
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=57.85 E-value=11 Score=37.57 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 36 4799999864
No 319
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=57.81 E-value=11 Score=38.91 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988753 54 1369999987644
No 320
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=57.61 E-value=8.4 Score=38.12 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
..|+|+|||.+|+.+|-.|.+ .|+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~-----~G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATR-----AGL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHH-----TTC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCCCC
Confidence 479999999999999988865 263 68999987543
No 321
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=57.50 E-value=9.8 Score=36.81 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=43.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-------cccCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 399 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-------~~~~~ 399 (591)
.+|+++++||.||++ ||..-++..+.+ .| -+++++|++- +.+......+. -|..+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLPE-------TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT-------SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCCeEEEECCCCC
Confidence 367889999999853 444455555554 36 3688888741 12332222221 01112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007754 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566554 799999777654
No 322
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=57.39 E-value=12 Score=34.64 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=37.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc-
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 410 (591)
++||.|| |-.|..+++.|+ + .| .+++++|++. + .+.. .+.-|.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~----~-~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLA----R-AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHH----H-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHH----h-CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899988 545555555554 3 26 3688888741 1 1111 1111111113456666655
Q ss_pred -CCcEEEeccCCC
Q 007754 411 -KPTILIGSSGVG 422 (591)
Q Consensus 411 -kPtvLIG~S~~~ 422 (591)
++|+||=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 323
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=57.17 E-value=17 Score=36.55 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=57.5
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc-hhhhhhcc-ccCCCCCHH
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~-~~k~~fA~-~~~~~~~L~ 404 (591)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. ..+..+.. |..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466679999997 7777777776654 251 46888876421 1001121 00111111 111122455
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 007754 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 446 (591)
Q Consensus 405 e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 446 (591)
++++ ++|++|=+.+.... -|..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 69999988775431 145567777665 4567887544
No 324
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=57.15 E-value=9.1 Score=38.47 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.++..+.|++..+. .+++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444556643333 88999999998777766655432 363 46887775
No 325
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=57.09 E-value=10 Score=38.11 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 577888754
No 326
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.88 E-value=6.9 Score=40.40 Aligned_cols=106 Identities=9% Similarity=0.074 Sum_probs=47.3
Q ss_pred HHHHHHhCCCccc-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc
Q 007754 319 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 397 (591)
Q Consensus 319 l~A~r~~g~~l~d-~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~ 397 (591)
|+.-.+....+++ -||-|+|+|..|-.-++.+...-.....+ .+-.+=+-++|++ .+......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~-------~~~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD-------QAMAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS-------HHHHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC-------HHHHHHHHHHcCC-C
Confidence 4444455556666 59999999988765555554321110001 0001223355542 1112222222211 0
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc
Q 007754 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS 435 (591)
Q Consensus 398 ~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~ 435 (591)
.-..++.|.++.-++|+++ +++....=-+-++++|.+
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~a 119 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAA 119 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHT
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHc
Confidence 1236899999988899877 666553323444444543
No 327
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=56.73 E-value=27 Score=33.18 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=40.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhh------hcc-ccCCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAH-EHEPV 400 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~------fA~-~~~~~ 400 (591)
+++++++||.||++ ||..-++..+.+ .|. +++++|++- . .+...... +.. |-.+.
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EGA-------TVLGLDLKP----P---AGEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----H---HHHHHHHHhCCceEEEEccCCCH
Confidence 57888999999853 444455555554 363 688887642 1 12111111 111 21222
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007754 401 NNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 401 ~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566554 799999766543
No 328
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=56.55 E-value=9.8 Score=38.24 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
+..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999988865 364 68999987654
No 329
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=56.48 E-value=8.5 Score=40.36 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999988854 25 3799999864
No 330
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=56.45 E-value=9.5 Score=39.59 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988764 3641 378899886
No 331
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=56.44 E-value=30 Score=31.21 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=51.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh--hhhhcc-ccCCCCCHHHHhc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~--k~~fA~-~~~~~~~L~e~V~ 408 (591)
||+|.|| |-.|..+++.|++ .| .+++.++++. +.+... ...+.. |..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7777777777654 25 3688887741 111110 001111 1111111 6666
Q ss_pred ccCCcEEEeccCCCCCC-------CHHHHHHHHcCCCCcEEEEcC
Q 007754 409 VIKPTILIGSSGVGRTF-------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~F-------t~evv~~Ma~~~erPIIFaLS 446 (591)
. +|++|=+.+..... ++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4 89999777654221 367888887665566776544
No 332
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=56.22 E-value=11 Score=35.97 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=23.9
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 46788999999843 444445555544 36 368888764
No 333
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=56.18 E-value=11 Score=36.09 Aligned_cols=88 Identities=16% Similarity=0.196 Sum_probs=54.1
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
+-...+|+|.|| |-.|..+++.|.+ .| .+++.+|++ .. ++.+ ..++.++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-Dl~d-----------~~~~~~~ 58 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DL-DITN-----------VLAVNKF 58 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TC-CTTC-----------HHHHHHH
T ss_pred ccccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cC-CCCC-----------HHHHHHH
Confidence 345678999987 6677777666643 25 368888764 11 1221 1346677
Q ss_pred hcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 407 VKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 59 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 59 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 776689999988775431 03566777766544 7888655
No 334
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.06 E-value=9.5 Score=40.17 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988764 26 4689999754
No 335
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=56.04 E-value=23 Score=34.43 Aligned_cols=96 Identities=20% Similarity=0.145 Sum_probs=52.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhccc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (591)
||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+...+..+.. |..+..++.++++.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG- 77 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC-
Confidence 8999996 7778777777754 25 3688887742 111112111111111 11222357777774
Q ss_pred CCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 446 (591)
+|++|=+.+..+.. +..+++++.+..-+.+||.=|
T Consensus 78 -~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 -LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777665567887544
No 336
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=55.95 E-value=14 Score=34.60 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=54.3
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHH
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (591)
..-.+|+|.|| |-.|..|++.|++ .|- -++.+++++. ++...+......+.. |..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 6667666666543 241 3677777642 111111111111111 22222457778
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 007754 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++. .|++|=..+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554332 2566788887655555666444
No 337
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=55.70 E-value=11 Score=39.12 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=27.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|||+|||.||+..|..|.+.+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999998876431 13 4688887754
No 338
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=55.63 E-value=35 Score=35.38 Aligned_cols=131 Identities=6% Similarity=-0.006 Sum_probs=87.1
Q ss_pred HHHhhCCCeeeeeecCCCccHHHHHHHHcCCCeeec--cCCCchhHHHHHHHHHHHHHhC------CCcccceEEEeCcC
Q 007754 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRFLFLGAG 340 (591)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g------~~l~d~riv~~GAG 340 (591)
+-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +++++.||.++|-+
T Consensus 96 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDICT-ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 44567 55544 55453 45566667774 689999 66 5666778888888777777 37999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc---c---CCCCCHHHHhcccCCcE
Q 007754 341 EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVKVIKPTI 414 (591)
Q Consensus 341 sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~---~---~~~~~L~e~V~~vkPtv 414 (591)
.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+.+.-+.+|.. + ....++.|+|+. .||
T Consensus 171 ~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 MN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp SS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred Cc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 52 578888887776 375 689999988853111 1122222233322 1 123689999997 999
Q ss_pred EEe
Q 007754 415 LIG 417 (591)
Q Consensus 415 LIG 417 (591)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 974
No 339
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=55.62 E-value=9.6 Score=40.16 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=27.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 48999999999999999887632 136520 138888876
No 340
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=55.42 E-value=25 Score=35.80 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=52.4
Q ss_pred CCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCC
Q 007754 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (591)
Q Consensus 306 DiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~ 385 (591)
+.++.....++..+.+++..+.+ .+++++|.|||..|.-.+.+.. ..|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLAR-----LAGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC----------
Confidence 34554444566666777665543 4789999999876655444332 2364 578877653
Q ss_pred Cchhhhhhccc-------cCCCCCHHHHhcc---c---CCcEEEeccC
Q 007754 386 LQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSG 420 (591)
Q Consensus 386 l~~~k~~fA~~-------~~~~~~L~e~V~~---v---kPtvLIG~S~ 420 (591)
+.+..+++. .....++.+.++. . +.|++|=+++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G 262 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAG 262 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCC
Confidence 233334432 0112456666654 1 5788887766
No 341
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=55.36 E-value=18 Score=35.03 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=54.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhccc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (591)
||+|.|| |-.|..+++.|++ .| .+++.+|+.- ......+.. ...+.. |..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899987 6666666666543 25 3677777621 111011111 111111 111223566777766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 89999988775431 0345677776655567887644
No 342
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=55.29 E-value=11 Score=35.71 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.+|+-.|..+.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4679999999999999988764 25 368888875
No 343
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=55.25 E-value=8.4 Score=37.46 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
...+|+|+|||.||+..|..+.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 456899999999999999988652 53 5788887
No 344
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=55.24 E-value=9.2 Score=37.44 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.++||+|+|..|..-+++|..+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999998888653 5 368888864
No 345
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=55.16 E-value=8.1 Score=39.89 Aligned_cols=39 Identities=15% Similarity=0.261 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhc-CeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETR-KKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~-~~i~lvD~~GL 377 (591)
..+|||+|||.||+..|..|.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999988764 31 000 47889988753
No 346
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=55.15 E-value=8.1 Score=40.41 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
..+|||+|||.||+..|..|.+. ..| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~---~~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL---DPE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH---CTT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhh---CcC-------CCEEEEECCCc
Confidence 46899999999999999988653 013 47889988654
No 347
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=55.08 E-value=8 Score=36.96 Aligned_cols=83 Identities=22% Similarity=0.330 Sum_probs=53.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
||+|.|| |-.|..+++.|.+ .| .+++.+++. .. ++. +..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DIT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCC-----------CHHHHHHHHHhcC
Confidence 8999997 7777777776643 24 368888771 11 122 1135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 412 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999987775531 034577777765554 887654
No 348
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=54.94 E-value=10 Score=39.76 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999988865 25 479999986
No 349
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=54.82 E-value=60 Score=33.88 Aligned_cols=131 Identities=19% Similarity=0.235 Sum_probs=84.6
Q ss_pred HHHhhCCCeeeeeecCCCccHHHHHHHHcCCCeeec--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHH
Q 007754 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 346 (591)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GI 346 (591)
+-.+| .++++ +--+. +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +|++.||+++|-| . -+
T Consensus 121 vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HH
T ss_pred HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hh
Confidence 44456 56544 44443 45566666765 689998 55 4455667888877777666 5999999999998 2 37
Q ss_pred HHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-c---CCCCCHHHHhcccCCcEEEeccCC
Q 007754 347 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSSGV 421 (591)
Q Consensus 347 A~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S~~ 421 (591)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-+.-+.+|+. + ....++.|+|+. .||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888877766 375 68889888874321 111112223322 1 123589999997 9999876543
No 350
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=54.63 E-value=23 Score=35.44 Aligned_cols=86 Identities=19% Similarity=0.093 Sum_probs=54.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
..||+++|+ |..|--+++.+.+ .|. +-++.||.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 468999999 9888766665543 253 35778887411 00 0 01 11123678898875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 007754 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (591)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (591)
.+||+.| +.+.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~vi-I~tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASV-IYVPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEE-ECCCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEE-EecCH-HHHHHHHHHHHHCCCCEEE
Confidence 5699888 33333 5889999988877666533
No 351
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.59 E-value=12 Score=38.97 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999877653 5 378999986
No 352
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.59 E-value=13 Score=38.48 Aligned_cols=89 Identities=8% Similarity=0.096 Sum_probs=52.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc--cCCCCCHHHHhcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~--~~~~~~L~e~V~~ 409 (591)
.||.|+|+|..|..+|..+... | .+++++|++- +.+. .|.. .....++.|+++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~-----~a~~~G~~~~~~~~e~~~~ 64 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAK-----SAVDEGFDVSADLEATLQR 64 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHH-----HHHHTTCCEESCHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHH-----HHHHcCCeeeCCHHHHHHh
Confidence 5899999999999999988653 5 3688887641 1111 1111 1112467776654
Q ss_pred c--CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 I--KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 v--kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
. .+|++| ++.... -++++++.++.+.+.-||.=.|
T Consensus 65 a~~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 65 AAAEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HHHTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cccCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 2 467666 444332 4667777766554444554443
No 353
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=54.51 E-value=36 Score=32.32 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=42.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
.++++.++||.||++ ||...++..+.+ .|. +++++|++- ...+.+. ...+.-|. ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468889999999853 444445555544 363 688888752 0000010 00110111 2356666
Q ss_pred hccc-CCcEEEeccCCC
Q 007754 407 VKVI-KPTILIGSSGVG 422 (591)
Q Consensus 407 V~~v-kPtvLIG~S~~~ 422 (591)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6655 799999777643
No 354
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=54.40 E-value=14 Score=39.90 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=20.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++++.+++|.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998555555555443 262 57887763
No 355
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.33 E-value=28 Score=37.33 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=30.8
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~edA~~ 461 (591)
-+++|=.||.+--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35677778877667888877664 345555 888888888766544
No 356
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=54.30 E-value=28 Score=35.16 Aligned_cols=44 Identities=23% Similarity=0.144 Sum_probs=27.1
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 319 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+.|+...+.--.+++++|.|+|..|...+.+... .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 3444333444467899999999777655544432 363 5777765
No 357
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=54.29 E-value=86 Score=32.14 Aligned_cols=129 Identities=14% Similarity=0.151 Sum_probs=83.5
Q ss_pred HHHhhCCCeeeeeecCCCccHHHHHHHHcCCCeeec--cCCCchhHHHHHHHHHHHHHhCCCcc-cceEEEeCcChHHHH
Q 007754 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLGAGEAGTG 345 (591)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~l~-d~riv~~GAGsAg~G 345 (591)
+-.+| .++++ +-.++ +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +++ +.||.++|-|. -
T Consensus 87 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g-~l~~gl~va~vGD~~---~ 157 (307)
T 3tpf_A 87 VIGAM-VDFVM-MRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWNK-MQNGIAKVAFIGDSN---N 157 (307)
T ss_dssp HHHHH-SSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTTC-CGGGCCEEEEESCSS---H
T ss_pred HHHHh-CCEEE-EecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCC---c
Confidence 44456 55443 44444 45666677765 689998 65 5555667787777555554 799 99999999973 4
Q ss_pred HHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc----CCCCCHHHHhcccCCcEEEecc
Q 007754 346 IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSS 419 (591)
Q Consensus 346 IA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S 419 (591)
+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|+. .||+.-..
T Consensus 158 va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvyt~~ 222 (307)
T 3tpf_A 158 MCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVVITDT 222 (307)
T ss_dssp HHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEEECC
T ss_pred cHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEecC
Confidence 78888887766 374 68888888874321 1111112233221 123689999997 99998654
No 358
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=54.25 E-value=11 Score=36.36 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=57.0
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhcc
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 409 (591)
.+|+|.|| |-.|..+++.|++. ..| .+++.+|++. .. ..+.+ +..+.. |..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKL---YGT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHH---HCG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHh---CCC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 87887787777542 012 3678887641 11 00100 111111 21222357778887
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 789999988775321 1345677777655567887533
No 359
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=54.13 E-value=10 Score=40.16 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
...|+|+|||.+|+++|-.+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 374 588999864
No 360
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=54.08 E-value=10 Score=41.19 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 363 689999864
No 361
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=53.99 E-value=41 Score=33.78 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=56.3
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHh
Q 007754 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (591)
Q Consensus 330 ~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V 407 (591)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. |..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 7777777776654 25 3688888742 111101111111111 212223577777
Q ss_pred cccCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 408 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 446 (591)
+ ++|++|=+.+.... | |..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988775432 1 235677776665567887544
No 362
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=53.91 E-value=10 Score=40.54 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||.|+|+|..|..+|..+.+. | .+++++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 367888874
No 363
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=53.87 E-value=13 Score=37.95 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=26.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+|+|+|||.+|+..|-.|.+ .| .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~-----~G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR-----NG-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCCC
Confidence 79999999999999988865 26 36888887643
No 364
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=53.81 E-value=10 Score=39.92 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 45689999999999999998865 25 4699999863
No 365
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=53.65 E-value=12 Score=37.69 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888652 6 4688888764
No 366
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=53.64 E-value=14 Score=39.33 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD 373 (591)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988751 15 4799999
No 367
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.39 E-value=12 Score=38.67 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|||+|||.||+..|..|.+. . .| -++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 0 13 4788888864
No 368
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=53.12 E-value=41 Score=32.42 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=26.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 3 TLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 57889999999863 555556666655 36 368888875
No 369
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=53.08 E-value=25 Score=32.28 Aligned_cols=94 Identities=16% Similarity=0.196 Sum_probs=51.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCC-CCCHHHHhcc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~-~~~L~e~V~~ 409 (591)
||+|.|| |-.|..+++.|++ .| -++++++++.- +...+ .+..+.. |..+ ..++.++++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 7899995 5666666555542 25 46888887521 11111 1111111 2222 2356667764
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 8999977765421 1456777776655455666443
No 370
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.05 E-value=33 Score=33.36 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=44.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc----------c
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------E 396 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~----------~ 396 (591)
.+|++.++||.||++ ||..-++..+.+ .| -+++++|++ . +.++..+..+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 358889999999864 444555555554 36 368888874 1 123332222211 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007754 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 397 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
-.+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11123455666655 799999766643
No 371
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=53.05 E-value=5.9 Score=39.86 Aligned_cols=93 Identities=13% Similarity=0.116 Sum_probs=50.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|...+..+.. +..+. +-+.++|++ .+......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~-------~~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN-------QEAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS-------HHHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC-------HHHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655431 11121 223456652 11122222222100122468999999878
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
+|+++ +++.. ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44433 45566665544333 45553
No 372
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=52.83 E-value=28 Score=33.38 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=24.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++++.++||.||.. ||...++..+.+ .|. +++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 36788999998743 444555555554 363 58888764
No 373
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=52.72 E-value=12 Score=39.08 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999987754 25 3689999873
No 374
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=52.61 E-value=14 Score=35.74 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=40.7
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHH
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 404 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~ 404 (591)
+.++.++++||.||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. |..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 455555555554 363 688887641 110111111111111 212223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 007754 405 DAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 405 e~V~~v-----kPtvLIG~S~~~ 422 (591)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 555544 789999766643
No 375
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=52.44 E-value=9.1 Score=37.70 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=59.7
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh----------hhcc-c
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~----------~fA~-~ 396 (591)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. |
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45789999996 7788777777754 25 36888877421 10000111110 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 397 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122235777777 69999988875321 1345788888777678998643
No 376
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=52.28 E-value=49 Score=31.23 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=41.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
+|++.+++|.||++ ||...++..+.+ .| -+++++|++--+ .... -..+.-|..+..++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999753 444555555554 36 368888875211 0010 001111212223455556
Q ss_pred ccc-----CCcEEEeccCC
Q 007754 408 KVI-----KPTILIGSSGV 421 (591)
Q Consensus 408 ~~v-----kPtvLIG~S~~ 421 (591)
+.+ ++|+||=..+.
T Consensus 66 ~~~~~~~g~id~lv~~Ag~ 84 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGI 84 (250)
T ss_dssp HHHHHHCSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCc
Confidence 544 79999977664
No 377
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=52.22 E-value=22 Score=34.04 Aligned_cols=38 Identities=29% Similarity=0.320 Sum_probs=25.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+++++||.||++ ||...++..+.++ |. +++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G~-------~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-GA-------SVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-TC-------EEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-CC-------EEEEEeCC
Confidence 458889999999864 4445555555543 63 68888874
No 378
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=52.20 E-value=11 Score=39.48 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999887764 363 6899998654
No 379
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=52.18 E-value=12 Score=36.25 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
--|+|+|||+||+-.|..+.+ .|+ ++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g~-------~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----ANL-------KTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 358999999999998876654 363 68888864
No 380
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=52.13 E-value=8.2 Score=36.16 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=25.1
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 3 RLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 455556665555 36 368888764
No 381
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=52.11 E-value=33 Score=32.84 Aligned_cols=76 Identities=21% Similarity=0.294 Sum_probs=39.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHH
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~ 406 (591)
.++++.+++|.||+. ||...++..+.++ | -+++++|++. +.+... ..+.-|..+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~~-G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFADA-G-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHHT-T-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHHC-C-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 346778999999853 4555566665553 6 3688887742 112220 0111121222344455
Q ss_pred hccc-----CCcEEEeccCC
Q 007754 407 VKVI-----KPTILIGSSGV 421 (591)
Q Consensus 407 V~~v-----kPtvLIG~S~~ 421 (591)
++.+ ++|+||=..+.
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~ 97 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGV 97 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 5543 58999976654
No 382
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=52.04 E-value=13 Score=39.85 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=28.9
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
-.+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3456899999999999999888652 64 688998864
No 383
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=51.99 E-value=7.2 Score=39.16 Aligned_cols=90 Identities=16% Similarity=0.142 Sum_probs=49.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+......+.|- .....++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF-------IEGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS-------HHHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC-------HHHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665533 1121 223456653 111122222221 122368999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
+|+++ +++.. ....++++...+.. ++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~g-k~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVERG-IPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHcC-CcEEE
Confidence 99887 44444 34555555544332 45553
No 384
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=51.95 E-value=12 Score=39.02 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 4 368888874
No 385
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=51.91 E-value=12 Score=39.90 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999988865310 25 3689999854
No 386
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=51.91 E-value=12 Score=35.53 Aligned_cols=37 Identities=30% Similarity=0.282 Sum_probs=23.4
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36778999999843 444445555544 363 58887764
No 387
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=51.88 E-value=11 Score=40.20 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999888652 5 3689999864
No 388
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=51.85 E-value=6.5 Score=42.23 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=24.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.||||+|+|.||+-.|+.|.. .+ -+|.|||++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876531 12 379999985
No 389
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=51.77 E-value=14 Score=36.63 Aligned_cols=101 Identities=13% Similarity=0.195 Sum_probs=57.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhh----------hhcc-c
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 396 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~----------~fA~-~ 396 (591)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.-- ...+.+...+. .+.. |
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFAT---GHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCc---cchhhHHHHhhhcccccCCceEEEECC
Confidence 55679999998 7777777776654 25 36888887421 10011111111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 397 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235667777 69999988875431 1345677776655566887544
No 390
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=51.77 E-value=12 Score=38.83 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
-+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999987754 25 3789999863
No 391
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=51.77 E-value=17 Score=37.66 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
..+|||+|||.||+..|..|.+. +- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999888653 21 147888888653
No 392
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.70 E-value=11 Score=39.17 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LGL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999987754 263 68999986
No 393
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=51.69 E-value=26 Score=34.82 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=56.4
Q ss_pred CCcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc---cCCCcCCCchhh------hhhcc-
Q 007754 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHFK------KPWAH- 395 (591)
Q Consensus 327 ~~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv---~~~r~~~l~~~k------~~fA~- 395 (591)
..++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999986 66776676666541 024 478888874210 000001111111 01111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 396 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
|..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999977764431 134577777666555 888665
No 394
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=51.67 E-value=12 Score=36.08 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987754 253 57777653
No 395
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=51.61 E-value=13 Score=40.06 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
..+|||+|||.||.-.|-.|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876320 24 37999998643
No 396
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=51.56 E-value=26 Score=35.57 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=28.4
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 319 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+.|+......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333344467899999999777665544432 264 57888875
No 397
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=51.52 E-value=23 Score=32.90 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=21.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G~-------~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KGY-------RVGLMARD 38 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 46799998743 444555555554 363 68888764
No 398
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=51.51 E-value=50 Score=31.69 Aligned_cols=76 Identities=14% Similarity=0.240 Sum_probs=41.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHh
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V 407 (591)
+|++.++||.||++ ||...++..+.+ .| -+++++|++. ++..... .+.-|..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~----~~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYD----HIECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSE----EEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceE----EEEecCCCHHHHHHHH
Confidence 46778999999753 455555555554 36 3688887742 1100111 0111211223455555
Q ss_pred ccc-----CCcEEEeccCCC
Q 007754 408 KVI-----KPTILIGSSGVG 422 (591)
Q Consensus 408 ~~v-----kPtvLIG~S~~~ 422 (591)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 699999776643
No 399
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=51.45 E-value=9.6 Score=40.13 Aligned_cols=37 Identities=22% Similarity=0.396 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
.+|||+|||.||...|-.|.+... .|+ ++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G~-------~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DRI-------DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GGS-------EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CCC-------EEEEEecCCC
Confidence 479999999999999998876431 253 6888988643
No 400
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.38 E-value=36 Score=33.77 Aligned_cols=55 Identities=20% Similarity=0.248 Sum_probs=31.4
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 308 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
++...-.++..+.+.+..+ .-.+++++|.|||..|...+. ++.+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq-~ak~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQ-CAVA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHH-HHHH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHH-HHHH----cCC------cEEEEEec
Confidence 4433333344444444443 346889999999987754443 3332 364 56777765
No 401
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=51.38 E-value=15 Score=39.01 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 456899999999999999988653 21 257999998743
No 402
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=51.36 E-value=9.2 Score=38.15 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=49.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ .+......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF-------PAAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS-------HHHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC-------HHHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665533 1121 223356653 111222222221 12 678999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 412 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
+|+++ +++.+ ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 3455555544332 355553
No 403
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=51.26 E-value=23 Score=33.69 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=41.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch-hhhhhcc-ccCCCCCHHH
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLLD 405 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~-~k~~fA~-~~~~~~~L~e 405 (591)
+|++.+++|.||++ ||...++..+.+ .|. +++++|++- ++ +.+.. ....+.. |..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EGA-------LVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778999999753 444555555554 363 688887641 11 00100 0001111 2122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007754 406 AVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 406 ~V~~v-----kPtvLIG~S~~~ 422 (591)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 56554 799999776643
No 404
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.18 E-value=15 Score=40.78 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988653 6 3699999863
No 405
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=51.06 E-value=15 Score=38.22 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
..+|||+|||.||+..|..+.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998765 364 137999987643
No 406
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=51.02 E-value=6.8 Score=37.86 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=57.0
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCc--CCCchhhhhhcc-ccCCCCCHHHH
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~--~~l~~~k~~fA~-~~~~~~~L~e~ 406 (591)
..+|+|.|| |..|..+++.|++. | ..++..++++. ++. ..+......+.+ |-.+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888777652 4 13677777641 110 001000111111 11222467788
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 007754 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 447 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 447 (591)
++. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 875 8999987653211 2557788887666667888 664
No 407
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=50.94 E-value=4.5 Score=42.89 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.2
Q ss_pred cccceEEEeCcChHHHHHHHHHHHH
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~ 353 (591)
....+|+|+|||.||+..|..|.++
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999988753
No 408
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=50.94 E-value=13 Score=38.99 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 45799999999999999887642 5 3799999874
No 409
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=50.71 E-value=15 Score=38.08 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHH
Q 007754 331 EHRFLFLGAGEAGTGIAELIALE 353 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~ 353 (591)
+--|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 410
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=50.65 E-value=11 Score=39.42 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988764 25 479999986
No 411
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=50.59 E-value=16 Score=36.85 Aligned_cols=55 Identities=22% Similarity=0.183 Sum_probs=33.4
Q ss_pred CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 308 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
++.....++..+.|++..+.+ .+++|+|+|||..|...+.+.. ..|. ++++.+|+
T Consensus 158 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 158 NGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-----AAGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-----HTTC------CSEEEEES
T ss_pred HHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECC
Confidence 333333445556667555433 5789999999877765554332 2374 56888875
No 412
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=50.47 E-value=17 Score=38.77 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999988653 21 2479999987543
No 413
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=50.40 E-value=11 Score=35.81 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=43.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc-------cccCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 399 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA-------~~~~~ 399 (591)
.++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+...+..+. -|..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 444444444444 36 3688888641 11222222221 11112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007754 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 400 ~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23455666655 799999776653
No 414
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=50.29 E-value=30 Score=33.39 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=48.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
+.+|+|.|| |-.|..+++.|++ .| .+++.+|+. +.. + . .+.-|..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 7777777776653 25 367777753 111 0 1 111122233467788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 410 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987765321 03456777665543 6777544
No 415
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=50.04 E-value=14 Score=39.51 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+.+|+|+|||.+|+-.|-.|.. .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988765 375 46677764
No 416
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=50.03 E-value=32 Score=34.83 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.....+.+++..+....+++++|.|||..|..++.+... .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 333445667766655478999999998877666655432 362 5777775
No 417
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=49.98 E-value=31 Score=32.90 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=43.2
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc----------cc
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------EH 397 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~----------~~ 397 (591)
++++.++||.||++ ||..-++..+.+ .|. +++++|++. +.+...+..+.. |.
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EGF-------TVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TTC-------EEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999864 555555555555 363 688888741 123332222211 11
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCCC
Q 007754 398 EPVNNLLDAVKVI----KPTILIGSSGVG 422 (591)
Q Consensus 398 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 422 (591)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1122455555554 789999666643
No 418
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=49.95 E-value=19 Score=33.23 Aligned_cols=101 Identities=14% Similarity=0.069 Sum_probs=54.7
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHH
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~ 406 (591)
.+..+|+|.|| |-.|..+++.+++ .|- -.++++++++. ++.+.+.. ...+.. |..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~~-----g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GSD-----KFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TTT-----TCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cCC-----CcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 6666666666654 220 14688877641 10000100 001111 11222357777
Q ss_pred hcccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 407 VKVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 407 V~~vkPtvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 446 (591)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 774 8999977664321 1 467778887665566777543
No 419
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.92 E-value=12 Score=38.94 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999987754 25 379999986
No 420
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=49.90 E-value=15 Score=39.25 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=29.0
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35689999999999999988764 363 68899886443
No 421
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=49.82 E-value=9.5 Score=37.66 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.+|+..|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 024 368888876
No 422
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=49.81 E-value=12 Score=38.70 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+|+|||.||+-.|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999877653 74 68888875
No 423
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=49.70 E-value=19 Score=34.51 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=24.9
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|++.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 40 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EGA-------KVVFGDIL 40 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 357788999999754 444555555554 363 68888764
No 424
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=49.64 E-value=9 Score=37.80 Aligned_cols=90 Identities=9% Similarity=0.113 Sum_probs=49.0
Q ss_pred ccceEEEeCcChHHHH-HHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhc
Q 007754 330 AEHRFLFLGAGEAGTG-IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (591)
Q Consensus 330 ~d~riv~~GAGsAg~G-IA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~ 408 (591)
+-.||.|+|+|..|.. .++.+.. ..+. +-+.++|++ .+......+.|- .+...++.|+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~~--~~~~~~~~~ll~ 65 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN-------KVKREKICSDYR--IMPFDSIESLAK 65 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC-------HHHHHHHHHHHT--CCBCSCHHHHHT
T ss_pred ccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC-------HHHHHHHHHHcC--CCCcCCHHHHHh
Confidence 4479999999988865 5554421 1121 223366652 111222222221 122678999998
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 409 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
++|+++ +++... ...+++....+ ..++++.
T Consensus 66 --~~D~V~-i~tp~~-~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 66 --KCDCIF-LHSSTE-THYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp --TCSEEE-ECCCGG-GHHHHHHHHHH-TTCEEEE
T ss_pred --cCCEEE-EeCCcH-hHHHHHHHHHH-CCCcEEE
Confidence 799988 555454 44555544333 2355553
No 425
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=49.54 E-value=25 Score=33.66 Aligned_cols=38 Identities=26% Similarity=0.487 Sum_probs=25.0
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.++++.++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 9 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 46 (267)
T 1iy8_A 9 TRFTDRVVLITGGGS---GLGRATAVRLAA-EGA-------KLSLVDVS 46 (267)
T ss_dssp -CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 457889999999753 455555555554 363 68888764
No 426
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=49.54 E-value=28 Score=33.07 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=25.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458889999999854 444445555544 36 368888864
No 427
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=49.48 E-value=11 Score=37.00 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999888642 54 57788854
No 428
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=49.46 E-value=28 Score=34.31 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=58.1
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch-----hhhhhcc-ccCCCC
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~-----~k~~fA~-~~~~~~ 401 (591)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+...+.. .+..+.. |..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 7777777776654 25 3688888742 11111110 0111111 112223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (591)
++.++++.+++|++|=+.+.+.. -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988875321 0234566665544 467888655
No 429
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=49.45 E-value=60 Score=31.44 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=42.3
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhc----------ccc
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA----------HEH 397 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA----------~~~ 397 (591)
+|+++++||.||++ ||...++..+.+ .|. +++++|++ . +.+......+. -|.
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AGA-------HVILHGVK----P---GSTAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TTC-------EEEEEESS----T---TTTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEcCC----H---HHHHHHHHHHHhcCCeEEEEEecC
Confidence 57788999999853 444555555554 363 68888874 1 12333222221 122
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCC
Q 007754 398 EPVNNLLDAVKVI----KPTILIGSSGV 421 (591)
Q Consensus 398 ~~~~~L~e~V~~v----kPtvLIG~S~~ 421 (591)
.+..++.++++.+ +.|+||=..+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2223444455443 79999976664
No 430
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=49.45 E-value=18 Score=35.27 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=21.8
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 66 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRR 66 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 3568899999999853 444455555544 36 368888874
No 431
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=49.27 E-value=13 Score=37.72 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..++||+|||.||+..|..+.+ .|. .-++.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3679999999999999987754 353 2367888764
No 432
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=49.27 E-value=36 Score=32.67 Aligned_cols=38 Identities=37% Similarity=0.517 Sum_probs=25.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.++++.++||.||+. ||...++..+.++ | -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~~-G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAKL-K-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHHT-T-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHHC-C-------CEEEEEEcC
Confidence 458889999999753 4445555555543 6 358888864
No 433
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=49.23 E-value=28 Score=34.94 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.0
Q ss_pred chhHHHHHHHHHHHHHhCCCccc--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 309 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 309 GTaaV~LAgll~A~r~~g~~l~d--~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++-...++..+.|+...+..-.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556667433443456 89999998 8777766665543 363 478888763
No 434
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=49.21 E-value=15 Score=38.55 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+..++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988765 26 368999984
No 435
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=49.18 E-value=7 Score=40.22 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=49.9
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 332 HRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 332 ~riv~~GAG-sAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
.||.|+|+| .+|...+..|.. ..++ +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~----~~~~------~l~av~d~~-------~~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRH----HPDA------QIVAACDPN-------EDVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHH----CTTE------EEEEEECSC-------HHHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHh----CCCe------EEEEEEeCC-------HHHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 888777766543 1121 234456652 11122222222 122347899999988
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (591)
++|+++ +++.+ .+..+++....+. .++++
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899988 55544 3444555443332 24554
No 436
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=49.04 E-value=12 Score=35.47 Aligned_cols=95 Identities=16% Similarity=0.087 Sum_probs=53.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhh---hhhcc-ccCCCCCHHHHh
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAH-EHEPVNNLLDAV 407 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k---~~fA~-~~~~~~~L~e~V 407 (591)
||+|.|| |-.|..+++.|.+. ..| .+++.++++. + ...... ..+.. |-.+..++.+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~D~~d~~~~~~~~ 63 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----A---KAQALAAQGITVRQADYGDEAALTSAL 63 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----T---TCHHHHHTTCEEEECCTTCHHHHHHHT
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----H---hhhhhhcCCCeEEEcCCCCHHHHHHHH
Confidence 5889997 77777777666431 003 3577777641 1 121111 11111 112223577777
Q ss_pred cccCCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEEcC
Q 007754 408 KVIKPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 408 ~~vkPtvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+. +|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 64 ~~--~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 64 QG--VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp TT--CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred hC--CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 75 799998776420 23778899988766667887544
No 437
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=48.95 E-value=33 Score=33.48 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=56.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCc-CCCchhhhh----------hcc-ccC
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK-DSLQHFKKP----------WAH-EHE 398 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~-~~l~~~k~~----------fA~-~~~ 398 (591)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.-- ..|. ....+.... +.. |..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7777777776654 25 36888876311 0010 001111111 111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 007754 399 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 399 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (591)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 22356777776679999988775421 1445777777766567888544
No 438
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.89 E-value=13 Score=38.78 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 379999983
No 439
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=48.84 E-value=27 Score=32.80 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=38.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc-
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 410 (591)
.++||.||++ ||...++..+.+ .| -+++++|++- + .+.. .+.-|..+..++.++++.+
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~ 60 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhC
Confidence 3688988753 455555555554 36 3688887741 1 1211 0111111123466667665
Q ss_pred -CCcEEEeccCCC
Q 007754 411 -KPTILIGSSGVG 422 (591)
Q Consensus 411 -kPtvLIG~S~~~ 422 (591)
++|+||=..+..
T Consensus 61 ~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 61 KGMDGLVLCAGLG 73 (257)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 789999777654
No 440
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.82 E-value=13 Score=39.38 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAAR-----HN-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHH-----CC-------CcEEEEeCCC
Confidence 579999999999999988865 25 4699999863
No 441
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=48.78 E-value=20 Score=36.10 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.++..+.|++..+. -.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444556655443 346899999998777665544432 364 57888875
No 442
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=48.73 E-value=16 Score=38.33 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+..++|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988754 36 37999996653
No 443
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=48.73 E-value=11 Score=40.77 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1364 689999864
No 444
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=48.70 E-value=21 Score=35.01 Aligned_cols=81 Identities=12% Similarity=0.210 Sum_probs=44.2
Q ss_pred CCCcccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhh------ccc
Q 007754 326 GGTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW------AHE 396 (591)
Q Consensus 326 g~~l~d~riv~~GAGs---Ag~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~f------A~~ 396 (591)
..+|+++++||.||++ .|..||+.+++ .|. +++++|++. ...+.+......+ .-|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999963 34446666553 363 588888751 1101111111111 011
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007754 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 397 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
..+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 11223455666655 799999777654
No 445
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=48.68 E-value=31 Score=33.46 Aligned_cols=105 Identities=15% Similarity=0.152 Sum_probs=56.1
Q ss_pred CcccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCc----hhhhhhcc-ccCCCC
Q 007754 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ----HFKKPWAH-EHEPVN 401 (591)
Q Consensus 328 ~l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~----~~k~~fA~-~~~~~~ 401 (591)
+-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+. .....+.. |..+..
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 76 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADAC 76 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHH
Confidence 344678999997 6666666666653 25 36888887421 00000010 00111111 112224
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 007754 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (591)
Q Consensus 402 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (591)
++.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 57788888899999987775431 1335677776655 367887544
No 446
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=48.54 E-value=41 Score=33.34 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 316 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
...+.+++..+. -.+++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344566776655 3578999999998885444433322 23 57888876
No 447
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=48.46 E-value=20 Score=33.76 Aligned_cols=37 Identities=16% Similarity=0.335 Sum_probs=24.2
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+++++.+++|.||.. ||...++..+.++ | -+++++|+
T Consensus 3 ~~l~~k~vlITGasg---giG~~~a~~l~~~-G-------~~V~~~~r 39 (261)
T 1gee_A 3 KDLEGKVVVITGSST---GLGKSMAIRFATE-K-------AKVVVNYR 39 (261)
T ss_dssp GGGTTCEEEETTCSS---HHHHHHHHHHHHT-T-------CEEEEEES
T ss_pred CCCCCCEEEEeCCCC---hHHHHHHHHHHHC-C-------CEEEEEcC
Confidence 357788999999753 4445555555543 6 35888876
No 448
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=48.42 E-value=13 Score=39.22 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=28.8
Q ss_pred CCCchhHHHHHHHHHHHHH---hCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 306 DIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 306 DiQGTaaV~LAgll~A~r~---~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
..||-|+++.--.+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 8 ~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 8 HHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -----------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 3456666655443332211 111222358999999999999999886531 13 479999987543
No 449
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=48.37 E-value=28 Score=32.30 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=24.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 4 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 4 KLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 455555555554 36 368888764
No 450
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=48.35 E-value=52 Score=31.53 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=52.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-ccCCCCCHHHHhccc
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 410 (591)
||+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+. ....+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLSS---GRREFVN-PSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCSS---CCGGGSC-TTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCCC---CchhhcC-CCceEEECccccHH-HHhhcC--
Confidence 7999998 7778777777754 25 36888876411 1101011 1111111 211222 555554
Q ss_pred CCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 007754 411 KPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 446 (591)
Q Consensus 411 kPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 446 (591)
.|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 39999777643211 245777777666678888655
No 451
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=48.13 E-value=10 Score=40.48 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=0.0
Q ss_pred EEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEE--EEcCC
Q 007754 334 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC--LVDSK 375 (591)
Q Consensus 334 iv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~--lvD~~ 375 (591)
||++|||.+|+++|-.|.+......-+...+.....| ++|++
T Consensus 42 vi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~ 85 (501)
T 4b63_A 42 LLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQ 85 (501)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESS
T ss_pred EEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEecc
No 452
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=48.06 E-value=17 Score=34.58 Aligned_cols=37 Identities=24% Similarity=0.432 Sum_probs=24.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AGA-------TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 47788999999753 444555555554 363 68888764
No 453
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=48.03 E-value=14 Score=39.42 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=27.0
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.-++..|+|+|||.+|+-.|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999988865 365 45666654
No 454
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=47.91 E-value=32 Score=34.27 Aligned_cols=83 Identities=10% Similarity=0.105 Sum_probs=46.8
Q ss_pred cceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 331 EHRFLFLGAGEAGT-GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 331 d~riv~~GAGsAg~-GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
.-||.|+|+|..|. .++..+ .. .|. +=+.++|++ .+ ......+.|- ...-..++.|+++.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l----~~-~~~------~lvav~d~~----~~---~~~~~a~~~~-~~~~~~~~~~ll~~ 64 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQL----ID-AGA------ELAGVFESD----SD---NRAKFTSLFP-SVPFAASAEQLITD 64 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHH----HH-TTC------EEEEEECSC----TT---SCHHHHHHST-TCCBCSCHHHHHTC
T ss_pred ccEEEEECCChHHHHHhhhhh----cC-CCc------EEEEEeCCC----HH---HHHHHHHhcC-CCcccCCHHHHhhC
Confidence 46899999998764 343333 22 232 224577763 22 2334444441 11234789999988
Q ss_pred cCCcEEEeccCCCCCCCHHHHH-HHH
Q 007754 410 IKPTILIGSSGVGRTFTKEVIE-AMA 434 (591)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~-~Ma 434 (591)
-++|+++ +++.. .+..+++. ++.
T Consensus 65 ~~~D~V~-i~tp~-~~h~~~~~~al~ 88 (336)
T 2p2s_A 65 ASIDLIA-CAVIP-CDRAELALRTLD 88 (336)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCCEEE-EeCCh-hhHHHHHHHHHH
Confidence 7899887 55544 34445444 454
No 455
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=47.85 E-value=13 Score=35.71 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=24.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999988866543 364 57788864
No 456
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=47.81 E-value=1.5e+02 Score=30.43 Aligned_cols=131 Identities=13% Similarity=0.171 Sum_probs=84.7
Q ss_pred HHHhhCCCeeeeeecCCCccHHHHHHHHcCCCeeec--cCCCchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHH
Q 007754 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 346 (591)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GI 346 (591)
+-.+| .+++ -+-.+. +.+.+.|.+|-.++||.| |...---.=+||=++.-.+..| +|++.||.++|-|.=+ -+
T Consensus 94 vls~~-~D~i-viR~~~-~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~~~~-rv 168 (310)
T 3csu_A 94 VISTY-VDAI-VMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQG-RLDNLHVAMVGDLKYG-RT 168 (310)
T ss_dssp HHTTT-CSEE-EEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHS-CSSSCEEEEESCTTTC-HH
T ss_pred HHHHh-CCEE-EEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC-ch
Confidence 44567 4543 355554 456677788875799999 4244445567777777666665 7999999999987421 36
Q ss_pred HHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcccc----CCCCCHHHHhcccCCcEEEeccC
Q 007754 347 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSG 420 (591)
Q Consensus 347 A~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S~ 420 (591)
|+-++.++.+-.|+ +|.++-.+|+-- ++.-..+++.. ....++.|+|+. .||+.-..-
T Consensus 169 a~Sl~~~~~~~~g~-------~v~~~~P~~~~~-------~~~~~~~~~~~g~~~~~~~d~~eav~~--aDvvyt~~~ 230 (310)
T 3csu_A 169 VHSLTQALAKFDGN-------RFYFIAPDALAM-------PQYILDMLDEKGIAWSLHSSIEEVMAE--VDILYMTRV 230 (310)
T ss_dssp HHHHHHHHHTSSSC-------EEEEECCGGGCC-------CHHHHHHHHHTTCCEEECSCGGGTTTT--CSEEEECC-
T ss_pred HHHHHHHHHhCCCC-------EEEEECCccccc-------CHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEECCc
Confidence 67777776652264 688888888733 22222333321 123689999997 999997654
No 457
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=47.71 E-value=12 Score=37.87 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=49.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhccc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~v 410 (591)
..||.|+|+|..|...++.+. +..|. +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~----~~~~~------~lvav~d~~-------~~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT----KSEKL------KLVTCYSRT-------EDKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT----TCSSE------EEEEEECSS-------HHHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHH----hCCCc------EEEEEECCC-------HHHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 358999999997765554432 21121 224466652 11122222222 123357899999877
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 411 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
++|+++ +++.. ....++++...+. .++|+.
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 95 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCARS-GKHIYV 95 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHHc-CCEEEE
Confidence 899888 55544 4555655554432 355554
No 458
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=47.69 E-value=21 Score=35.64 Aligned_cols=93 Identities=12% Similarity=0.145 Sum_probs=49.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcc
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~ 409 (591)
+..||.|+|+|..|...++.+... .+. +-+.++|++ .+ ......+.|-- .....++.|+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~----~~---~~~~~a~~~~~-~~~~~~~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT----LE---SAQAFANKYHL-PKAYDKLEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC----SS---TTCC---CCCC-SCEESCHHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC----HH---HHHHHHHHcCC-CcccCCHHHHhcC
Confidence 346999999998887666554321 121 223456653 11 12222222210 0123689999987
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 410 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
-++|+++ +++.. .+..++++...+. .++++.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 96 (329)
T 3evn_A 66 ESIDVIY-VATIN-QDHYKVAKAALLA-GKHVLV 96 (329)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCEEE-ECCCc-HHHHHHHHHHHHC-CCeEEE
Confidence 7789887 55544 4555655544332 355554
No 459
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.64 E-value=17 Score=38.00 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LGF-------NTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEecCC
Confidence 4579999999999999988865 263 799999854
No 460
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=47.58 E-value=17 Score=37.92 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35799999999999999888653 6 468999986
No 461
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=47.46 E-value=17 Score=37.40 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988754 24 4788888753
No 462
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=47.38 E-value=38 Score=34.17 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.2
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 319 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+.++......-.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333334457899999998777666554432 264 57888875
No 463
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=47.33 E-value=11 Score=37.95 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.8
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|++.++||+|+|..|..-+++|..+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999888753 5 468888864
No 464
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=47.31 E-value=18 Score=38.13 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999988764 20 125799999864
No 465
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=47.26 E-value=38 Score=34.23 Aligned_cols=45 Identities=16% Similarity=0.049 Sum_probs=28.1
Q ss_pred HHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 319 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+.++......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 180 ~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 3334333333457899999999877666554432 263 57888875
No 466
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=47.26 E-value=17 Score=36.60 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=24.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 333 riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|+|+|||.||+..|-.|.+. ..|+ ++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G~-------~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPLW-------AIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTTS-------EEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCCC-------CEEEEECC
Confidence 699999999999999887653 0143 56777764
No 467
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=47.18 E-value=14 Score=39.26 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..|+|+|||.+|+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999987764 364 578888763
No 468
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=47.18 E-value=34 Score=33.78 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=25.5
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|++.++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 74 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARS 74 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 457889999999853 444455555554 36 368888875
No 469
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.14 E-value=12 Score=38.18 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv 378 (591)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4589999999999999887742 12 79999986543
No 470
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=47.10 E-value=29 Score=33.87 Aligned_cols=77 Identities=16% Similarity=0.256 Sum_probs=41.7
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc----------cc
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------EH 397 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~----------~~ 397 (591)
.+++.++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. |.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46678999999854 444555555554 36 3688888641 112222222111 11
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 007754 398 EPVNNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 398 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
.+..++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1123455666655 799999776653
No 471
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=46.87 E-value=42 Score=31.77 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=25.5
Q ss_pred CCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 326 g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999753 444455555554 36 368888764
No 472
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=46.85 E-value=38 Score=34.16 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 314 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
.++..+.++......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333444455333333457899999998777666554432 263 56888875
No 473
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=46.81 E-value=16 Score=34.78 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=24.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 357889999999853 444445555544 363 68887764
No 474
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.66 E-value=25 Score=34.37 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=24.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EGA-------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECCSC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 57888999999853 444455555554 363 58887764
No 475
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.63 E-value=49 Score=33.39 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=23.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+++++|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999997777666655443 25 2 68888763
No 476
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=46.42 E-value=36 Score=34.73 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 315 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
++..+.|++. ...-.+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 171 ~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 4445666664 33345789999999887765554433 2 364 57888876
No 477
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=46.35 E-value=1.4e+02 Score=30.64 Aligned_cols=130 Identities=21% Similarity=0.290 Sum_probs=85.0
Q ss_pred HHHhhCCCeeeeeecCCCccHHHHHHHHcCCCeeeccCC-CchhHHHHHHHHHHHHHhCCCcccceEEEeCcChHHHHHH
Q 007754 269 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDI-QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIA 347 (591)
Q Consensus 269 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FNDDi-QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA 347 (591)
+-.+| .++++ +--+. +.+.+.|.+|- ++||.|-.- .---.=+||=++.-.+..| +|++.||.++|-| --+|
T Consensus 97 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~---~rva 168 (315)
T 1pvv_A 97 VLSRY-VDAIM-ARVYD-HKDVEDLAKYA-TVPVINGLSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG---NNVA 168 (315)
T ss_dssp HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC---CHHH
T ss_pred HHHHh-CcEEE-EecCc-hHHHHHHHHhC-CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC---cchH
Confidence 45567 55443 44443 56666777775 589998321 3344667888887777665 7999999999998 2678
Q ss_pred HHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccc-c---CCCCCHHHHhcccCCcEEEecc
Q 007754 348 ELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSS 419 (591)
Q Consensus 348 ~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S 419 (591)
+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. + ....++.|+|+. .||+.-..
T Consensus 169 ~Sl~~~~~~-~g~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy~~~ 231 (315)
T 1pvv_A 169 HSLMIAGTK-LGA-------DVVVATPEGYEPDE---KVIKWAEQNAAESGGSFELLHDPVKAVKD--ADVIYTDV 231 (315)
T ss_dssp HHHHHHHHH-TTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHTTT--CSEEEECC
T ss_pred HHHHHHHHH-CCC-------EEEEECCccccCCH---HHHHHHHHHHHHcCCeEEEEeCHHHHhCC--CCEEEEcc
Confidence 888888776 475 79999888874321 111111223322 1 123689999997 99998754
No 478
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=46.27 E-value=25 Score=36.32 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|+|+|||-+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999988764 51 14688888753
No 479
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=46.19 E-value=11 Score=35.85 Aligned_cols=77 Identities=21% Similarity=0.254 Sum_probs=42.5
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhcc-------ccCCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHEPV 400 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~-------~~~~~ 400 (591)
+++++++||.||++ ||...++..+.+ .|. +++++|++- +.+......+.. |-.+.
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57889999999864 444455555554 363 578777641 112222221111 11122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007754 401 NNLLDAVKVI-----KPTILIGSSGVG 422 (591)
Q Consensus 401 ~~L~e~V~~v-----kPtvLIG~S~~~ 422 (591)
.++.++++.+ ++|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556544 799999776654
No 480
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=46.13 E-value=13 Score=39.49 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=27.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999887753 364 688898875
No 481
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=46.12 E-value=47 Score=33.07 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=50.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchhhhhhccccCCCCCHHHHhcccC
Q 007754 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (591)
Q Consensus 333 riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 411 (591)
||+|.|| |-.|..+++.|++. |. -+++.+|+. .+..+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888777653 52 257766654 011346667764
Q ss_pred CcEEEeccCCCC------------CCCHHHHHHHHcCCCC-cEEEEcC
Q 007754 412 PTILIGSSGVGR------------TFTKEVIEAMASFNEK-PLILALS 446 (591)
Q Consensus 412 PtvLIG~S~~~g------------~Ft~evv~~Ma~~~er-PIIFaLS 446 (591)
+|++|=+.+... ..+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 899986655321 1246788888776555 6777544
No 482
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.03 E-value=17 Score=38.14 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4589999999999999977754 263 599999853
No 483
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=46.00 E-value=19 Score=36.73 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..|+|+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 58999999999999998886520 15 3689999863
No 484
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=46.00 E-value=17 Score=39.60 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..|+|+|+|.+|+++|-.+.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4579999999999999998764 374 588998764
No 485
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=45.95 E-value=54 Score=35.06 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
..||.|+|+|.-|+.+|..+++. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999988763 5 367888864
No 486
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=45.91 E-value=39 Score=33.75 Aligned_cols=31 Identities=29% Similarity=0.502 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcC
Q 007754 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (591)
Q Consensus 332 ~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~ 374 (591)
+||-|+|-|..|.++|..|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999988763 64 5777776
No 487
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=45.90 E-value=1.5e+02 Score=31.02 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=80.2
Q ss_pred CccHHHHHHHHcCCCeeec--cCCCchhHHHHHHHHHHHHHhCCC-cccce--EEEeCc----ChHHHHHHHHHHHHHHH
Q 007754 286 NHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGT-LAEHR--FLFLGA----GEAGTGIAELIALEISK 356 (591)
Q Consensus 286 ~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~-l~d~r--iv~~GA----GsAg~GIA~ll~~~~~~ 356 (591)
.+.+.+.|.+|- ++||.| ||. --.=+||=++.-.+..|.+ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 456777777875 689999 777 6667788888888888865 99999 889998 6 3577777777766
Q ss_pred hcCCChhhhcCeEEEEcCC-CcccCCCcCCCchhhhhhcccc----CCCCCHHHHhcccCCcEEEeccCC
Q 007754 357 QTKAPVEETRKKICLVDSK-GLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSSGV 421 (591)
Q Consensus 357 ~~G~s~eeA~~~i~lvD~~-GLv~~~r~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S~~ 421 (591)
.|+ +|.++-.+ |+.-.. .+.+.-+.+|+.. ....++.|+|+. .||+.-..=+
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w~ 275 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSWG 275 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECCC
T ss_pred -cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCcc
Confidence 475 68888888 773321 1111112233221 123689999997 9999876543
No 488
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=45.80 E-value=63 Score=31.56 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=26.4
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.
T Consensus 24 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~~~ 61 (299)
T 3t7c_A 24 GKVEGKVAFITGAAR---GQGRSHAITLAR-EG-------ADIIAIDVC 61 (299)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECC
T ss_pred cccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 468889999999864 444555555555 36 368888875
No 489
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=45.79 E-value=19 Score=37.66 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.3
Q ss_pred cccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 329 l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
-...+|+|+|||.||+..|-.|.++ | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999888653 6 368888876
No 490
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=45.53 E-value=19 Score=35.61 Aligned_cols=36 Identities=31% Similarity=0.591 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+.-|+|+|||+||+-.|-.+.+. +.|+ ++.++|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 466799999999999999887643 2353 68888875
No 491
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=45.51 E-value=13 Score=37.91 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=52.3
Q ss_pred cccceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhhcCe----EEEEcCCCcccCCCcCCCchhhhhhccc--
Q 007754 329 LAEHRFLFLG-AGEAGTG-IA----ELIALEISKQTKAPVEETRKK----ICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 396 (591)
Q Consensus 329 l~d~riv~~G-AGsAg~G-IA----~ll~~~~~~~~G~s~eeA~~~----i~lvD~~GLv~~~r~~~l~~~k~~fA~~-- 396 (591)
.+.-||.|+| +|..|.+ .+ +.+.. ..++.... ... +.++|++ . +..+.+|..
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~-~~~~~~~~av~~~~-------~----~~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKN-GDRIMPDPILVGRS-------A----EKVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTT-SCEEEEEEEEECSS-------S----HHHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecC-CcccceeeEEEcCC-------H----HHHHHHHHHhC
Confidence 3456999999 9999987 66 44432 22221100 011 1244442 1 122334432
Q ss_pred cC-CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007754 397 HE-PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (591)
Q Consensus 397 ~~-~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (591)
.+ -..++.|+++.-++|+++ +++.. .+..+++++..+. .++|+.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 11 137899999988899887 55544 4566665554432 356554
No 492
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=45.45 E-value=57 Score=31.44 Aligned_cols=100 Identities=18% Similarity=0.068 Sum_probs=55.5
Q ss_pred cccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCch-------hhhhhc--cccC
Q 007754 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-------FKKPWA--HEHE 398 (591)
Q Consensus 329 l~d~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~-------~k~~fA--~~~~ 398 (591)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|++- ++.+.+.. .+..+. -|..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~ 72 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLE-----HG-------YKVRGTARSA----SKLANLQKRWDAKYPGRFETAVVEDML 72 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSH----HHHHHHHHHHHHHSTTTEEEEECSCTT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCCc----ccHHHHHHHhhccCCCceEEEEecCCc
Confidence 56789999998 7777777777654 25 3677777641 00000100 001111 1222
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHc-CCCCcEEEEcC
Q 007754 399 PVNNLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMAS-FNEKPLILALS 446 (591)
Q Consensus 399 ~~~~L~e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~-~~erPIIFaLS 446 (591)
+..++.++++ ++|++|=+.+.... -|..+++++.+ ..-+.|||.=|
T Consensus 73 d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 73 KQGAYDEVIK--GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp STTTTTTTTT--TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred ChHHHHHHHc--CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 2235556665 59999988775431 13456666653 33467888655
No 493
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=45.42 E-value=61 Score=31.14 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=25.8
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 17 ~~l~~k~~lVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 54 (267)
T 1vl8_A 17 FDLRGRVALVTGGSR---GLGFGIAQGLAE-AGC-------SVVVASRN 54 (267)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred cCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 468889999999753 555556665555 363 68888764
No 494
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=45.31 E-value=44 Score=32.26 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=24.6
Q ss_pred CcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 328 ~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 25 ~l~gk~vlVTGas~---gIG~aia~~la~-~G~-------~V~~~~r~ 61 (266)
T 3uxy_A 25 GFEGKVALVTGAAG---GIGGAVVTALRA-AGA-------RVAVADRA 61 (266)
T ss_dssp -CTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECSSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 57888999999854 455555555554 363 68888764
No 495
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=45.31 E-value=38 Score=32.58 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=27.1
Q ss_pred CCcccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 327 ~~l~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
.+|+++++||.||++ ||...++..+.+ .| -+++++|+.+
T Consensus 7 ~~l~~k~~lVTGas~---GIG~a~a~~la~-~G-------~~V~~~~r~~ 45 (277)
T 3tsc_A 7 GKLEGRVAFITGAAR---GQGRAHAVRMAA-EG-------ADIIAVDIAG 45 (277)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred cccCCCEEEEECCcc---HHHHHHHHHHHH-cC-------CEEEEEeccc
Confidence 468899999999864 444555555555 36 3688998854
No 496
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=45.26 E-value=18 Score=38.15 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=26.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
..+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G~-------~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----GL-------NVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 45799999999999999988753 53 566666653
No 497
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=45.21 E-value=39 Score=33.62 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=55.6
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCcccCCCcCCCchh----------hhhhcc-ccCC
Q 007754 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----------KKPWAH-EHEP 399 (591)
Q Consensus 332 ~riv~~GA-GsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~r~~~l~~~----------k~~fA~-~~~~ 399 (591)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ..+.+... +..+.. |..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 6677777766654 25 3688888752100 00112111 011111 1112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCC---CcEEEEcC
Q 007754 400 VNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE---KPLILALS 446 (591)
Q Consensus 400 ~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e---rPIIFaLS 446 (591)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357778888889999988775421 12345666665443 56777544
No 498
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=45.10 E-value=14 Score=38.21 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=27.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCCc
Q 007754 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (591)
Q Consensus 331 d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~GL 377 (591)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LGK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4579999999999999887764 363 6889998653
No 499
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.03 E-value=18 Score=40.55 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~G 376 (591)
+..+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999998865 26 3699999863
No 500
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=44.97 E-value=16 Score=38.25 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=27.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCeEEEEcCC
Q 007754 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (591)
Q Consensus 330 ~d~riv~~GAGsAg~GIA~ll~~~~~~~~G~s~eeA~~~i~lvD~~ 375 (591)
.+.+++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 356899999999999999887652 6 368899965
Done!