Query 007755
Match_columns 591
No_of_seqs 586 out of 4663
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:41:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 1.8E-41 6E-46 338.0 30.7 261 73-365 4-280 (285)
2 1n11_A Ankyrin; clathrin, BAND 100.0 6.2E-41 2.1E-45 356.2 32.9 322 60-392 66-398 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 6.6E-41 2.3E-45 356.0 32.8 290 68-390 8-297 (437)
4 4g8k_A 2-5A-dependent ribonucl 100.0 1.6E-40 5.6E-45 340.5 28.8 257 74-363 25-326 (337)
5 3d9h_A CDNA FLJ77766, highly s 100.0 4.2E-40 1.5E-44 329.3 24.6 268 70-363 11-279 (285)
6 3utm_A Tankyrase-1; tankyrase, 100.0 9.8E-40 3.3E-44 335.7 26.5 246 68-341 18-320 (351)
7 2xai_A ASB-9, ankyrin repeat a 100.0 3.8E-40 1.3E-44 325.3 20.7 242 73-346 2-250 (261)
8 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-40 5.7E-45 345.3 18.0 264 68-364 88-372 (373)
9 1yyh_A HN1;, notch 1, ankyrin 100.0 3E-39 1E-43 317.3 21.4 232 122-362 3-247 (253)
10 3ljn_A Hypothetical protein; a 100.0 1E-39 3.4E-44 338.4 17.1 263 67-363 13-314 (364)
11 3b7b_A Euchromatic histone-lys 100.0 4.4E-38 1.5E-42 305.4 26.9 231 122-358 4-234 (237)
12 1oy3_D Transcription factor in 100.0 6.4E-39 2.2E-43 319.4 21.4 255 68-345 3-269 (282)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 3.9E-38 1.3E-42 309.4 22.8 228 68-322 4-245 (253)
14 1k1a_A B-cell lymphoma 3-encod 100.0 3.1E-38 1.1E-42 307.0 21.7 234 122-362 2-240 (241)
15 1wdy_A 2-5A-dependent ribonucl 100.0 3.6E-37 1.2E-41 306.7 28.4 235 71-332 36-284 (285)
16 3b7b_A Euchromatic histone-lys 100.0 5.6E-37 1.9E-41 297.6 26.0 227 68-321 5-231 (237)
17 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-37 3.8E-42 303.1 20.3 230 69-322 4-238 (241)
18 3aji_A 26S proteasome non-ATPa 100.0 5.8E-37 2E-41 296.3 24.4 228 126-363 3-230 (231)
19 3aji_A 26S proteasome non-ATPa 100.0 4.7E-37 1.6E-41 296.9 23.4 225 71-322 3-227 (231)
20 3ljn_A Hypothetical protein; a 100.0 2.1E-37 7.3E-42 320.8 20.9 235 119-364 10-270 (364)
21 3d9h_A CDNA FLJ77766, highly s 100.0 4.9E-37 1.7E-41 307.0 22.7 229 69-329 54-282 (285)
22 2xai_A ASB-9, ankyrin repeat a 100.0 8.9E-37 3.1E-41 301.1 24.3 221 128-363 2-222 (261)
23 2dzn_A Probable 26S proteasome 100.0 6.9E-37 2.3E-41 295.0 22.9 222 129-359 2-226 (228)
24 2dzn_A Probable 26S proteasome 100.0 3.6E-36 1.2E-40 290.0 23.7 220 74-321 2-226 (228)
25 4b93_B Ankyrin repeat domain-c 100.0 4.5E-37 1.6E-41 304.2 15.6 217 124-345 6-229 (269)
26 2fo1_E LIN-12 protein; beta-ba 100.0 8.1E-37 2.8E-41 317.5 17.3 257 123-392 88-367 (373)
27 1s70_B 130 kDa myosin-binding 100.0 9.2E-37 3.1E-41 306.9 16.5 238 72-344 38-275 (299)
28 4b93_B Ankyrin repeat domain-c 100.0 1.2E-36 4.2E-41 301.1 16.7 227 71-319 8-235 (269)
29 3eu9_A Huntingtin-interacting 100.0 1.1E-35 3.9E-40 288.2 23.1 233 122-364 2-236 (240)
30 1oy3_D Transcription factor in 100.0 7.8E-36 2.7E-40 297.1 22.4 249 122-378 2-265 (282)
31 3utm_A Tankyrase-1; tankyrase, 100.0 1E-35 3.4E-40 305.7 23.8 249 120-377 15-319 (351)
32 4g8k_A 2-5A-dependent ribonucl 100.0 4.1E-35 1.4E-39 300.4 27.6 253 126-391 22-321 (337)
33 3eu9_A Huntingtin-interacting 100.0 4.9E-35 1.7E-39 283.8 23.8 231 70-327 5-236 (240)
34 3kea_A K1L; tropism, ANK repea 100.0 1.4E-35 4.9E-40 296.4 20.6 224 122-366 24-249 (285)
35 2f8y_A Notch homolog 1, transl 100.0 3.4E-35 1.2E-39 282.2 21.0 217 140-365 2-218 (223)
36 2f8y_A Notch homolog 1, transl 100.0 1.7E-34 5.8E-39 277.3 21.2 214 85-326 2-216 (223)
37 1ikn_D Protein (I-kappa-B-alph 100.0 2.4E-35 8.2E-40 286.1 11.1 219 123-345 2-230 (236)
38 3kea_A K1L; tropism, ANK repea 100.0 1.3E-34 4.5E-39 289.4 15.4 227 67-332 24-252 (285)
39 1sw6_A Regulatory protein SWI6 100.0 2.2E-34 7.4E-39 293.7 12.7 262 57-345 35-327 (327)
40 1ikn_D Protein (I-kappa-B-alph 100.0 7.7E-34 2.6E-38 275.5 13.5 221 68-310 2-229 (236)
41 2rfa_A Transient receptor pote 100.0 1E-32 3.5E-37 266.7 20.0 192 128-322 2-219 (232)
42 2rfa_A Transient receptor pote 100.0 2.2E-32 7.4E-37 264.4 22.0 197 73-291 2-222 (232)
43 1s70_B 130 kDa myosin-binding 100.0 5.8E-33 2E-37 279.1 18.4 271 79-380 3-274 (299)
44 3hra_A Ankyrin repeat family p 100.0 7.1E-32 2.4E-36 254.6 24.0 193 126-322 2-200 (201)
45 3hra_A Ankyrin repeat family p 100.0 9.2E-32 3.2E-36 253.8 22.9 194 72-289 3-201 (201)
46 2pnn_A Transient receptor pote 100.0 5.3E-33 1.8E-37 275.9 11.5 217 119-338 3-271 (273)
47 2pnn_A Transient receptor pote 100.0 4E-32 1.4E-36 269.5 16.1 218 68-304 7-271 (273)
48 2etb_A Transient receptor pote 100.0 9.6E-32 3.3E-36 264.1 16.1 205 73-322 1-243 (256)
49 2etb_A Transient receptor pote 100.0 2E-31 6.9E-36 261.8 15.9 205 128-365 1-248 (256)
50 3jxi_A Vanilloid receptor-rela 100.0 2.7E-31 9.4E-36 261.4 13.4 201 71-290 2-249 (260)
51 4gpm_A Engineered protein OR26 100.0 6.1E-30 2.1E-34 234.2 20.0 157 167-328 7-163 (169)
52 4gpm_A Engineered protein OR26 100.0 1.6E-29 5.6E-34 231.4 19.7 157 131-292 6-162 (169)
53 1sw6_A Regulatory protein SWI6 100.0 3.5E-31 1.2E-35 269.9 7.7 256 75-376 24-321 (327)
54 3jxi_A Vanilloid receptor-rela 100.0 3.2E-30 1.1E-34 253.8 13.7 208 126-364 2-251 (260)
55 4hbd_A KN motif and ankyrin re 100.0 3.8E-30 1.3E-34 255.7 13.1 193 129-324 76-274 (276)
56 4hbd_A KN motif and ankyrin re 100.0 6.7E-29 2.3E-33 246.7 13.1 192 165-362 77-274 (276)
57 2rfm_A Putative ankyrin repeat 100.0 5.4E-28 1.8E-32 226.5 18.1 166 119-289 25-190 (192)
58 3v30_A DNA-binding protein rfx 100.0 2.3E-28 8E-33 224.6 15.2 169 130-337 3-171 (172)
59 3v30_A DNA-binding protein rfx 100.0 1E-27 3.6E-32 220.3 17.0 147 118-269 25-171 (172)
60 2aja_A Ankyrin repeat family p 100.0 1.5E-30 5.3E-35 268.4 -3.8 238 71-345 89-360 (376)
61 2rfm_A Putative ankyrin repeat 100.0 1.5E-27 5.1E-32 223.4 16.6 161 158-322 29-189 (192)
62 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.1E-27 7.3E-32 215.7 16.9 156 130-290 6-161 (162)
63 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.3E-27 7.9E-32 215.5 16.8 159 163-326 4-162 (162)
64 3v31_A Ankyrin repeat family A 99.9 4.6E-27 1.6E-31 214.8 18.1 159 128-291 2-160 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.1E-26 3.8E-31 212.9 18.6 157 126-321 11-167 (169)
66 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.5E-26 5.3E-31 211.9 19.0 159 195-361 11-169 (169)
67 3v31_A Ankyrin repeat family A 99.9 7.6E-27 2.6E-31 213.4 16.8 154 164-321 3-156 (167)
68 2vge_A RELA-associated inhibit 99.9 7.6E-30 2.6E-34 246.1 -4.0 193 146-345 2-199 (229)
69 3twr_A Tankyrase-2; ankyrin re 99.9 3.8E-27 1.3E-31 214.9 13.7 160 195-362 5-164 (165)
70 1awc_B Protein (GA binding pro 99.9 1.8E-26 6.3E-31 207.7 17.5 150 130-319 3-152 (153)
71 3f6q_A Integrin-linked protein 99.9 8.9E-27 3E-31 215.6 15.8 101 228-331 68-168 (179)
72 2vge_A RELA-associated inhibit 99.9 8.3E-29 2.9E-33 238.8 2.1 192 122-321 14-209 (229)
73 3f6q_A Integrin-linked protein 99.9 1.5E-26 5E-31 214.1 16.0 165 196-367 3-167 (179)
74 1awc_B Protein (GA binding pro 99.9 3.4E-26 1.2E-30 205.9 18.0 128 119-251 25-152 (153)
75 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-26 4.5E-31 211.3 14.4 157 126-321 5-161 (165)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.2E-26 1.4E-30 205.9 17.1 153 129-287 2-154 (156)
77 2aja_A Ankyrin repeat family p 99.9 6.3E-29 2.2E-33 256.3 -3.1 222 126-366 89-347 (376)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.8E-26 2E-30 204.9 16.8 153 164-321 2-154 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 9E-27 3.1E-31 226.2 8.5 209 126-344 2-228 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-26 4E-31 225.4 6.0 178 162-345 3-192 (239)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 4.7E-24 1.6E-28 192.6 11.4 144 194-342 8-152 (156)
82 3t8k_A Uncharacterized protein 99.9 2.6E-24 8.9E-29 200.1 8.7 156 198-362 6-178 (186)
83 1d9s_A Cyclin-dependent kinase 99.9 8.8E-24 3E-28 186.1 10.6 131 224-362 4-135 (136)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-23 3.7E-28 190.2 11.0 143 123-271 6-149 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 2.2E-23 7.6E-28 183.5 12.4 129 121-254 4-133 (136)
86 3t8k_A Uncharacterized protein 99.9 8.6E-24 2.9E-28 196.6 9.2 154 129-289 6-177 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.3E-22 2.2E-26 171.0 14.3 124 232-362 2-125 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 2.8E-22 9.5E-27 176.4 12.0 123 231-360 13-135 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-21 3.9E-26 169.4 15.6 123 129-255 2-124 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 9.8E-22 3.4E-26 172.9 14.2 125 126-254 11-135 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-22 7.8E-27 177.2 8.8 127 227-360 5-131 (137)
92 3deo_A Signal recognition part 99.9 7.9E-22 2.7E-26 183.0 10.0 143 124-288 39-181 (183)
93 3ui2_A Signal recognition part 99.9 7E-22 2.4E-26 192.3 9.6 143 125-289 41-183 (244)
94 3ui2_A Signal recognition part 99.8 2.1E-21 7.1E-26 188.9 11.7 143 71-257 42-185 (244)
95 2b0o_E UPLC1; arfgap, structur 99.8 7.7E-21 2.6E-25 190.7 16.0 140 164-312 151-298 (301)
96 3c5r_A BARD-1, BRCA1-associate 99.8 1.4E-21 4.8E-26 172.1 8.7 125 194-321 6-130 (137)
97 3deo_A Signal recognition part 99.8 4.7E-21 1.6E-25 177.7 11.8 139 161-321 41-180 (183)
98 3aaa_C Myotrophin, protein V-1 99.8 3.5E-21 1.2E-25 166.1 10.1 111 229-342 4-114 (123)
99 1dcq_A PYK2-associated protein 99.8 3E-20 1E-24 184.1 15.2 127 232-364 130-264 (278)
100 2b0o_E UPLC1; arfgap, structur 99.8 1.2E-20 3.9E-25 189.4 11.9 140 74-245 151-299 (301)
101 3ehr_A Osteoclast-stimulating 99.8 6E-21 2.1E-25 182.7 8.9 132 122-257 66-198 (222)
102 1dcq_A PYK2-associated protein 99.8 2.3E-20 7.9E-25 185.0 13.1 192 124-322 61-260 (278)
103 3aaa_C Myotrophin, protein V-1 99.8 1.3E-20 4.4E-25 162.6 9.2 108 198-308 7-114 (123)
104 3ehr_A Osteoclast-stimulating 99.8 7.3E-21 2.5E-25 182.1 8.3 130 160-291 69-198 (222)
105 3jue_A Arfgap with coiled-coil 99.8 7E-19 2.4E-23 180.6 13.7 148 70-242 195-347 (368)
106 3jue_A Arfgap with coiled-coil 99.8 7.7E-19 2.6E-23 180.3 12.5 145 198-345 199-348 (368)
107 2l6b_A NR1C; ankyrin, consensu 99.8 5.1E-19 1.7E-23 150.5 9.3 109 227-338 4-112 (115)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.3E-18 4.6E-23 141.9 11.4 92 231-325 1-92 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-18 5.2E-23 186.6 13.8 98 229-329 168-268 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2E-18 6.9E-23 140.8 11.3 91 74-188 2-92 (93)
111 3lvq_E ARF-GAP with SH3 domain 99.8 3.8E-18 1.3E-22 183.5 15.5 135 166-309 134-276 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.7 1.7E-17 5.8E-22 141.0 10.2 62 126-189 6-67 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 5.4E-16 1.9E-20 130.6 9.5 91 227-319 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 9.7E-16 3.3E-20 129.0 10.3 96 119-217 14-109 (110)
115 2l2t_A Receptor tyrosine-prote 60.5 5.8 0.0002 26.0 2.4 30 524-553 7-36 (44)
116 2ks1_B Epidermal growth factor 59.8 4.4 0.00015 26.5 1.8 30 524-553 8-37 (44)
117 4ev6_A Magnesium transport pro 37.4 40 0.0014 33.0 5.6 23 496-518 278-300 (339)
118 2l8s_A Integrin alpha-1; trans 31.3 36 0.0012 23.2 2.7 25 524-548 7-31 (54)
119 2knc_A Integrin alpha-IIB; tra 26.7 50 0.0017 22.6 2.8 25 524-548 10-34 (54)
120 2iub_A CORA, divalent cation t 26.5 60 0.002 32.1 4.7 22 496-517 302-323 (363)
121 2jwa_A Receptor tyrosine-prote 25.7 33 0.0011 22.4 1.7 25 525-550 10-34 (44)
122 3gvo_A Pumilio 2, pumilio homo 25.2 24 0.00084 34.7 1.6 96 262-357 213-319 (351)
123 2knc_B Integrin beta-3; transm 24.5 52 0.0018 24.5 2.9 24 525-548 9-32 (79)
124 2zy9_A Mg2+ transporter MGTE; 23.6 2.9E+02 0.01 28.1 9.6 30 460-489 343-372 (473)
125 2k1a_A Integrin alpha-IIB; sin 22.7 79 0.0027 20.3 3.0 24 525-548 9-32 (42)
126 2zxe_G FXYD10, phospholemman-l 21.5 44 0.0015 24.2 1.8 8 534-541 21-28 (74)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-41 Score=337.98 Aligned_cols=261 Identities=28% Similarity=0.372 Sum_probs=239.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhcccccc-CCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007755 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEV-NELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
+|.||||.|++.|+.+++++|++. +..++.. +..|.||||+|+..|+.+++++|+++
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 61 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG----------------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc----------------------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 467999999999999999999986 4456665 78899999999999999999999998
Q ss_pred CCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceec---
Q 007755 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEIS--- 228 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~--- 228 (591)
+.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++. .++..
T Consensus 62 g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~ 137 (285)
T 1wdy_A 62 GAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGA-NVNLRRKT 137 (285)
T ss_dssp TCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-CTTCCCCC
T ss_pred CCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCC-Cccccccc
Confidence 765 5677889999999999999999999999999997 6678899999999999999999999999844 34444
Q ss_pred -------CCCCCcHHHHHHHcCCHHHHHHHHhc-CcccccccCCCCCcHHHHHHhCCC----HHHHHHHHHcCcccccCC
Q 007755 229 -------RSNGKNALHFAARQGHVDVVKALLSK-DPQLARRTDKKGQTALHMAVKGQS----CEVVKLLLEADAAIVMLP 296 (591)
Q Consensus 229 -------~~~g~tpLh~A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~ 296 (591)
+..|.||||+|+..|+.+++++|++. +.++ +..|..|+||||+|+..++ .+++++|+++|++ ++.+
T Consensus 138 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-~~~~ 215 (285)
T 1wdy_A 138 KEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVR 215 (285)
T ss_dssp CHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-SSCC
T ss_pred HHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-CCCc
Confidence 77899999999999999999999998 7777 7779999999999999999 9999999999998 8899
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccc
Q 007755 297 DKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRA 365 (591)
Q Consensus 297 d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 365 (591)
|..|+||||+|+..|+.+++++|++..|++++.+|..|+||||+|+..+ +.+++++|+++|++..
T Consensus 216 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~----~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK----LKKIAELLCKRGASTD 280 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHSSCSC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC----cHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999779999999999999999999999 8999999999999754
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-41 Score=356.19 Aligned_cols=322 Identities=25% Similarity=0.301 Sum_probs=254.0
Q ss_pred hhccchhhhccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCc-ch----------hHHHHhhhccccccCCC
Q 007755 60 AGKKKYVKQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAE-FD----------TEVAEIRSSVVNEVNEL 128 (591)
Q Consensus 60 ~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~ 128 (591)
..+.....+..+.+|.||||.|+..|+.+++++|++...........+.. .. .......+...+..+..
T Consensus 66 Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 145 (437)
T 1n11_A 66 LLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKK 145 (437)
T ss_dssp HHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC
Confidence 33334444567788999999999999999999999764322111111110 00 00111134556667788
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
|.||||+|+..|+.+++++|++++.+ .+..+..|.||||+|+..|+.+++++|+++++++ ...+..|.||||+|+..
T Consensus 146 g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 222 (437)
T 1n11_A 146 GFTPLHVAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAKQ 222 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHc
Confidence 88999999999999999999887654 4567778889999999999999999999988876 55677888999999999
Q ss_pred CCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHc
Q 007755 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEA 288 (591)
Q Consensus 209 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 288 (591)
|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++
T Consensus 223 ~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 300 (437)
T 1n11_A 223 NQVEVARSLLQY-GGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG-NLGNKSGLTPLHLVAQEGHVPVADVLIKH 300 (437)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 999999999987 4456777888999999999999999999999999887 66788999999999999999999999999
Q ss_pred CcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccccccc
Q 007755 289 DAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANEL 368 (591)
Q Consensus 289 ~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~ 368 (591)
|.+ ++.+|..|+||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..+ +.+++++|+++|++.....
T Consensus 301 g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~~g----~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 301 GVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQQG----HTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp TCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHTTCCSCCCC
T ss_pred Ccc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHCC----hHHHHHHHHHCcCCCCCCC
Confidence 887 788899999999999999999999999994 9999999999999999999998 8899999999999877666
Q ss_pred CCchHHhhhhhhhhhhhhhhHHHH
Q 007755 369 NQPRDELRKTVTQIKKDVHTQLEQ 392 (591)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~~~~l~~ 392 (591)
......+..+......++.+.++.
T Consensus 375 ~~g~t~l~~A~~~g~~~~~~~l~~ 398 (437)
T 1n11_A 375 SDGTTPLAIAKRLGYISVTDVLKV 398 (437)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHh
Confidence 666666665555555555554443
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-41 Score=355.98 Aligned_cols=290 Identities=31% Similarity=0.353 Sum_probs=242.7
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+..+..|.||||.|+..|+.++|++|++. +..++..|..|.||||+|+..|+.++|++
T Consensus 8 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~~~~~~t~L~~A~~~g~~~~v~~ 65 (437)
T 1n11_A 8 GGGGESGLTPLHVASFMGHLPIVKNLLQR----------------------GASPNVSNVKVETPLHMAARAGHTEVAKY 65 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHHT----------------------TCCSCCSSSCCCCHHHHHHHHTCHHHHHH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHc----------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 34677899999999999999999999986 56678888899999999999999999999
Q ss_pred HHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCccee
Q 007755 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 227 (591)
|++++++ ++.++..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++ .....
T Consensus 66 Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~ 141 (437)
T 1n11_A 66 LLQNKAK--VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLEKE-ASQAC 141 (437)
T ss_dssp HHHHTCC--SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCC
T ss_pred HHhCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCcC
Confidence 9998754 5677888999999999999999999999999887 567788999999999999999999999884 44566
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 007755 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVA 307 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A 307 (591)
.+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|++++++ ++..+.+|.||||+|
T Consensus 142 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 219 (437)
T 1n11_A 142 MTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIA 219 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHH
Confidence 7888999999999999999999999999887 66788999999999999999999999999887 677888899999999
Q ss_pred HHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhh
Q 007755 308 TRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVH 387 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~ 387 (591)
+..|+.+++++|++ .|++++..+..|.||||+|+..+ +.+++++|++.|++...........+.........++.
T Consensus 220 ~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g----~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 294 (437)
T 1n11_A 220 AKQNQVEVARSLLQ-YGGSANAESVQGVTPLHLAAQEG----HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 294 (437)
T ss_dssp HHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred HHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999998 48899999999999999999988 88899999998887665555555566655555444444
Q ss_pred hHH
Q 007755 388 TQL 390 (591)
Q Consensus 388 ~~l 390 (591)
+.+
T Consensus 295 ~~L 297 (437)
T 1n11_A 295 DVL 297 (437)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.6e-40 Score=340.54 Aligned_cols=257 Identities=25% Similarity=0.281 Sum_probs=145.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCC-CCCcHHHHHHHcCCHHHHHHHHhcC
Q 007755 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNE-LGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
|.|+||.|++.|+.++|+.||+. ++.+|.++. .|.||||+||..|+.++|++|+++|
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~----------------------Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g 82 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEG----------------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 82 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CChHHHHHHHcCCHHHHHHHHHC----------------------CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence 56999999999999999999986 677887775 4999999999999999999999988
Q ss_pred CCcC-------------------------------CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcc---------
Q 007755 153 TKEG-------------------------------LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ--------- 192 (591)
Q Consensus 153 ~~~~-------------------------------~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~--------- 192 (591)
+..+ ++..|..|.||||+|+..|+.+++++|+++|+++..
T Consensus 83 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~ 162 (337)
T 4g8k_A 83 ADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 162 (337)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC----
T ss_pred CchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccc
Confidence 6532 223344455555555555555555555555444321
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCC----HHHHHHHHhcCcccccccCCCCCc
Q 007755 193 TTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGH----VDVVKALLSKDPQLARRTDKKGQT 268 (591)
Q Consensus 193 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t 268 (591)
..+..|.||||+|+..|+.+++++||++.+.+++..|..|.|+||.++..++ .+++++|+++|+++ +.+|..|+|
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t 241 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKT 241 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCC
Confidence 1122344555555555555555555544444444445555555544443322 23444455555544 334445555
Q ss_pred HHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCCh
Q 007755 269 ALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSE 348 (591)
Q Consensus 269 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~ 348 (591)
|||+|+..|+.++++.|++.+...++.+|.+|+||||+|++.|+.++|++||+ .|+|+|.+ +||++|+..+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GAd~n~~-----~~L~~A~~~~--- 312 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCG-----DLVMTARRNY--- 312 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSCSSTTC-----CHHHHHHHTT---
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC-----CHHHHHHHcC---
Confidence 55555555555555555543222244455555555555555555555555554 24444322 3555555544
Q ss_pred hhHHHHHHHHhcCcc
Q 007755 349 EASEIKDCLARCGAV 363 (591)
Q Consensus 349 ~~~~i~~~L~~~ga~ 363 (591)
+.+++++|+++||+
T Consensus 313 -~~~iv~~Ll~~GA~ 326 (337)
T 4g8k_A 313 -DHSLVKVLLSHGAK 326 (337)
T ss_dssp -CHHHHHHHHHTTCC
T ss_pred -CHHHHHHHHHCcCC
Confidence 44455555555544
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=329.30 Aligned_cols=268 Identities=23% Similarity=0.281 Sum_probs=206.3
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 007755 70 TGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELL 149 (591)
Q Consensus 70 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll 149 (591)
....|.|+||+|+..|+.+.+..++...+...... .+....++..|..|.||||+|+..|+.++|++|+
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll 79 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGI-----------RLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLI 79 (285)
T ss_dssp -------------------------------CCSE-----------ECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHH
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccch-----------hhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHH
Confidence 34578899999999999888888765432110000 0002235778999999999999999999999999
Q ss_pred hcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecC
Q 007755 150 KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 150 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 229 (591)
+.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++.. ++. +
T Consensus 80 ~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~ 154 (285)
T 3d9h_A 80 SQGWA--VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP-E 154 (285)
T ss_dssp HTTCC--SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-S
T ss_pred HCCCC--CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCC-C
Confidence 98754 6778999999999999999999999999999987 67788999999999999999999999998543 333 4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHH
Q 007755 230 SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATR 309 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~ 309 (591)
.+|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|++.|++ ++ .|..|+||||+|+.
T Consensus 155 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~ 231 (285)
T 3d9h_A 155 SDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVR 231 (285)
T ss_dssp CTTSCHHHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHH
Confidence 56999999999999999999999999998 67799999999999999999999999999988 55 48899999999999
Q ss_pred CCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc-Ccc
Q 007755 310 KKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC-GAV 363 (591)
Q Consensus 310 ~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~-ga~ 363 (591)
.|+.+++++|++. |++++.+|..|+||||+|.. ..+++++|++. |+.
T Consensus 232 ~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~------~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 232 TASEELACLLMDF-GADTQAKNAEGKRPVELVPP------ESPLAQLFLEREGAS 279 (285)
T ss_dssp TTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCT------TSHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhcC------ccHHHHHHHHhhccC
Confidence 9999999999994 99999999999999999983 45788888887 544
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.8e-40 Score=335.69 Aligned_cols=246 Identities=26% Similarity=0.337 Sum_probs=175.7
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
...+..+.++||.||+.|+.+.++.++... +..++..|..|.||||+|+..|+.++|++
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~ 76 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPL---------------------NVNCHASDGRKSTPLHLAAGYNRVRIVQL 76 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTT---------------------TTTCCCSSTTCCCHHHHHHHTTCHHHHHH
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhc---------------------CCCcccCCCCCCCHHHHHHHcCCHHHHHH
Confidence 344566779999999999999999999753 55678889999999999999999999999
Q ss_pred HHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCccee
Q 007755 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 227 (591)
|+++|.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++++ ..++.
T Consensus 77 Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~ 152 (351)
T 3utm_A 77 LLQHGAD--VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHG-ADPTL 152 (351)
T ss_dssp HHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred HHHcCCC--CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcc
Confidence 9998755 5778899999999999999999999999999988 567889999999999999999999999984 44444
Q ss_pred cCCCC------------------------------------------------------CcHHHHHHHc---CCHHHHHH
Q 007755 228 SRSNG------------------------------------------------------KNALHFAARQ---GHVDVVKA 250 (591)
Q Consensus 228 ~~~~g------------------------------------------------------~tpLh~A~~~---g~~~~v~~ 250 (591)
.+..| .||||+|+.. +..+++++
T Consensus 153 ~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~ 232 (351)
T 3utm_A 153 VNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAEL 232 (351)
T ss_dssp CCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHH
T ss_pred ccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHH
Confidence 45444 4555555554 33455555
Q ss_pred HHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccc
Q 007755 251 LLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNAL 330 (591)
Q Consensus 251 Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~ 330 (591)
|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+
T Consensus 233 Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~ 309 (351)
T 3utm_A 233 LLRKGANV-NEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSY-GSDPSII 309 (351)
T ss_dssp HHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred HHHcCCCc-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCc
Confidence 55555554 33445555555555555555555555555544 444555555555555555555555555552 5555555
Q ss_pred cCCCCCHHHHH
Q 007755 331 TRDHKTALDIA 341 (591)
Q Consensus 331 d~~G~t~L~~A 341 (591)
|..|+||+++|
T Consensus 310 ~~~g~tal~~a 320 (351)
T 3utm_A 310 SLQGFTAAQMG 320 (351)
T ss_dssp CTTSCCHHHHS
T ss_pred CCCCCChhhhh
Confidence 55555555554
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=325.27 Aligned_cols=242 Identities=22% Similarity=0.264 Sum_probs=218.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 007755 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
+|.||||.|+..|+.++++.|++. +..++..|..|.||||+|+..|+.+++++|+++|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 59 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ----------------------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG 59 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT----------------------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC----------------------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 588999999999999999999986 6678899999999999999999999999999987
Q ss_pred CCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCC
Q 007755 153 TKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNG 232 (591)
Q Consensus 153 ~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 232 (591)
++ ++..|..|.||||+|+..|+.+++++|+++|+++. .+..|.||||+|+..|+.+++++|+++ +.+++..|..|
T Consensus 60 ~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g 134 (261)
T 2xai_A 60 AQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHL 134 (261)
T ss_dssp CC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTT
T ss_pred CC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCC
Confidence 54 57788999999999999999999999999999874 345699999999999999999999998 56678889999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCc
Q 007755 233 KNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKR 312 (591)
Q Consensus 233 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~ 312 (591)
.||||+|+..|+.+++++|+++|+++. . |..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..+
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~~~- 210 (261)
T 2xai_A 135 GTPLYLACENQQRACVKKLLESGADVN-Q-GKGQDSPLHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPPES- 210 (261)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHTCCTT-C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCTTC-
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCCCC-C-CCCCCChHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhccccc-
Confidence 999999999999999999999999984 3 88999999999999999999999999998 8999999999999999665
Q ss_pred HHHHHHHhcCCC-------CCcccccCCCCCHHHHHhhCCC
Q 007755 313 TEIVTELLSLPD-------TNVNALTRDHKTALDIAEGLPS 346 (591)
Q Consensus 313 ~~iv~~Ll~~~g-------~~~~~~d~~G~t~L~~A~~~~~ 346 (591)
++++.|++..+ ++++.+|..|+||+|+|.+...
T Consensus 211 -~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~ 250 (261)
T 2xai_A 211 -PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVL 250 (261)
T ss_dssp -THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSS
T ss_pred -cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCC
Confidence 48888988533 3577899999999999998873
No 8
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-40 Score=345.34 Aligned_cols=264 Identities=23% Similarity=0.275 Sum_probs=227.8
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccC-CCCCcHHHHHHHcCCHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVN-ELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~TpL~~Aa~~g~~~~v~ 146 (591)
...+..|.||||.|+..|+ ++++.|+ ...++..| ..|.||||+|+..|+.++++
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~------------------------~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~ 142 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPIT------------------------RESVNIIDPRHNRTVLHWIASNSSAEKSE 142 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCS------------------------TTTTTTCCCSSCCCHHHHHHCTTCCSCCT
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhc------------------------cccccccCCcCCCCHHHHHHHCCCHHHHH
Confidence 3567889999999999554 5665554 23467777 78999999999999999888
Q ss_pred HHH--------hcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 007755 147 ELL--------KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELL 218 (591)
Q Consensus 147 ~Ll--------~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 218 (591)
+|+ +.|. +++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+
T Consensus 143 ~Ll~~~~~~ll~~ga--~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 143 DLIVHEAKECIAAGA--DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp THHHHHHHHHHHTCC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHHHHhcCC--CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 887 5554 46778999999999999999999999999999998 577889999999999999999999999
Q ss_pred hccC--CcceecCCCCCcHHHHHHHcC---CHHHHHHHHhcCccccc-------ccCCCCCcHHHHHHhCCCHHHHHHHH
Q 007755 219 SKDG--GLLEISRSNGKNALHFAARQG---HVDVVKALLSKDPQLAR-------RTDKKGQTALHMAVKGQSCEVVKLLL 286 (591)
Q Consensus 219 ~~~~--~~~~~~~~~g~tpLh~A~~~g---~~~~v~~Ll~~~~~~~~-------~~d~~g~t~Lh~A~~~g~~~~v~~Ll 286 (591)
+++. ..++..|.+|.||||+|+..+ +.+++++|+++|+++.. ..|..|+||||+|+..|+.+++++|+
T Consensus 220 ~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 220 NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp TSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred hcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 8752 466778999999999999998 89999999999998742 25779999999999999999999999
Q ss_pred HcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007755 287 EADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 287 ~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
+.+...++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..+ +.+++++|.++++.+
T Consensus 300 ~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g----~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANN----HHNIVDIFDRCRPER 372 (373)
T ss_dssp HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTT----CHHHHHHHHTTC---
T ss_pred HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHHcC----CHHHHHHHHhcCccc
Confidence 987444899999999999999999999999999994 9999999999999999999999 899999999998753
No 9
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3e-39 Score=317.26 Aligned_cols=232 Identities=22% Similarity=0.250 Sum_probs=183.5
Q ss_pred ccccCCCCCcHHHHHHHcC-------------CHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q 007755 122 VNEVNELGETALFTAADKG-------------HIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP 188 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 188 (591)
+|.+|.+|.||||+|+..| +.+++++|++.+...+ ...|..|.||||+|+..|+.+++++|+++|+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcc-cccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 6788999999999999988 8999999999876532 4468899999999999999999999999999
Q ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCc
Q 007755 189 SLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQT 268 (591)
Q Consensus 189 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t 268 (591)
++ +..+..|.||||+|+..|+.+++++|++++...++..+..|.||||+|+..|+.+++++|++.|+++ +..|..|+|
T Consensus 82 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t 159 (253)
T 1yyh_A 82 DA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKS 159 (253)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-TCBCTTSCB
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 98 6678899999999999999999999999977788889999999999999999999999999999998 677999999
Q ss_pred HHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCCh
Q 007755 269 ALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSE 348 (591)
Q Consensus 269 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~ 348 (591)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||+|+|++.+
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~g--- 234 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM--- 234 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCccccccCCCCHHHHHHHcC---
Confidence 99999999999999999999998 888999999999999999999999999995 9999999999999999999999
Q ss_pred hhHHHHHHHHhcCc
Q 007755 349 EASEIKDCLARCGA 362 (591)
Q Consensus 349 ~~~~i~~~L~~~ga 362 (591)
+.+|+++|.....
T Consensus 235 -~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 235 -HHDIVRLLDLEHH 247 (253)
T ss_dssp -CHHHHHHHHC---
T ss_pred -CHHHHHHHHHHhh
Confidence 8999999876543
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1e-39 Score=338.35 Aligned_cols=263 Identities=18% Similarity=0.176 Sum_probs=227.6
Q ss_pred hhccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHH
Q 007755 67 KQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 67 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~ 146 (591)
....|.+|.||||.||..|+.++|++|++. +..++..|..|.||||+|+..|+.++|+
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~d~~g~t~L~~A~~~g~~~~v~ 70 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIET----------------------GVSPTIQNRFGCTALHLACKFGCVDTAK 70 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHHCCHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------CCCccccCCCCCcHHHHHHHcCCHHHHH
Confidence 344577888999999999999999999986 6678899999999999999999999999
Q ss_pred HHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC----CCCCcc----------------cCCCCCCCHHHHHH
Q 007755 147 ELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDH----DPSLSQ----------------TTGPSNATPLVSAA 206 (591)
Q Consensus 147 ~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~----~~~~~~----------------~~~~~g~tpL~~A~ 206 (591)
+|+++++. ..+..|.||||+|+..|+.+++++|+++ +.++.. ..+..|.||||+|+
T Consensus 71 ~Ll~~g~~----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 146 (364)
T 3ljn_A 71 YLASVGEV----HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCV 146 (364)
T ss_dssp HHHHHCCC----CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHH
T ss_pred HHHHCCCC----ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHH
Confidence 99998863 2345799999999999999999999998 665422 16678999999999
Q ss_pred HcC--CHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcc-----cccccCCCCCcHHHHHHhCCCH
Q 007755 207 TRG--HTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQ-----LARRTDKKGQTALHMAVKGQSC 279 (591)
Q Consensus 207 ~~g--~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~-----~~~~~d~~g~t~Lh~A~~~g~~ 279 (591)
..| +.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++++++ + +..|..|+||||+|+..|+.
T Consensus 147 ~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 147 GLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-DYANKQGNSHLHWAILINWE 224 (364)
T ss_dssp HSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-TCCCTTCCCTTHHHHTTTCH
T ss_pred HcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-cccCCCCCcHHHHHHHcCCH
Confidence 999 99999999998 667888899999999999999999999999999988 5 67799999999999999999
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCccc------------ccCCCCCHHHHHhhCCCC
Q 007755 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNA------------LTRDHKTALDIAEGLPSS 347 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~------------~d~~G~t~L~~A~~~~~~ 347 (591)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++. .+..|.||++.|+..+
T Consensus 225 ~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~-- 300 (364)
T 3ljn_A 225 DVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQK-TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP-- 300 (364)
T ss_dssp HHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHH-SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCH--
T ss_pred HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHc-CCchhhhcCcccCcccccccccccccchhhhhcc--
Confidence 999999999998 799999999999999999999999999995 665433 5678889999888776
Q ss_pred hhhHHHHHHHHhcCcc
Q 007755 348 EEASEIKDCLARCGAV 363 (591)
Q Consensus 348 ~~~~~i~~~L~~~ga~ 363 (591)
..+.+..|+..+++
T Consensus 301 --~~~~v~~ll~~~~~ 314 (364)
T 3ljn_A 301 --SKQEVLQLLQEKLD 314 (364)
T ss_dssp --HHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHH
Confidence 55555555544443
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-38 Score=305.36 Aligned_cols=231 Identities=25% Similarity=0.340 Sum_probs=210.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++..|..|.||||+|+..|+.+++++|+++|.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 80 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTC 80 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcH
Confidence 677899999999999999999999999998755 5678889999999999999999999999999987 5678899999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHH
Q 007755 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEV 281 (591)
Q Consensus 202 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~ 281 (591)
||+|+..|+.+++++|+++++..++..+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.++
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999977788888999999999999999999999999999998 6779999999999999999999
Q ss_pred HHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHH
Q 007755 282 VKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLA 358 (591)
Q Consensus 282 v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~ 358 (591)
+++|+++|++ ++.+|..|.||||+|++.|+.+++++|+++ |++++.+|..|+||||+|+..+......++.+.|.
T Consensus 160 ~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 160 AEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSR-DSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234 (237)
T ss_dssp HHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHc-CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998 788999999999999999999999999994 99999999999999999999884333334444433
No 12
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.4e-39 Score=319.42 Aligned_cols=255 Identities=23% Similarity=0.216 Sum_probs=192.8
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
...|.+|.||||.|++.|+.+++++|++.... ...++.+|..|.||||+|+..|+.++|++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------------------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 63 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG-------------------HEYLDLQNDLGQTALHLAAILGEASTVEK 63 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT-------------------SGGGGCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-------------------cccccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 34688999999999999999999999975210 22378899999999999999999999999
Q ss_pred HHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcc------------cCCCCCCCHHHHHHHcCCHHHHH
Q 007755 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ------------TTGPSNATPLVSAATRGHTAVVN 215 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~------------~~~~~g~tpL~~A~~~g~~~~v~ 215 (591)
|+++|++ ++..+..|.||||+|+..|+.+++++|++++++... .....+.++++.++..+......
T Consensus 64 Ll~~ga~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (282)
T 1oy3_D 64 LYAAGAG--VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEE 141 (282)
T ss_dssp HHHTTCC--SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------------------
T ss_pred HHHcCCC--CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhh
Confidence 9998765 567888999999999999999999999999876422 12234567787777776666655
Q ss_pred HHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccC
Q 007755 216 ELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVML 295 (591)
Q Consensus 216 ~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~ 295 (591)
.++...+..++..+..|.||||+|+..|+.+++++|+++|+++....+..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 142 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~ 220 (282)
T 1oy3_D 142 PRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-PTA 220 (282)
T ss_dssp --CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred hhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-Ccc
Confidence 5555556667788999999999999999999999999999998544335699999999999999999999999998 899
Q ss_pred CCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007755 296 PDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 296 ~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~ 345 (591)
+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||+++|....
T Consensus 221 ~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 221 RMYGGRTPLGSALLRPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CCTTSCCHHHHHHTSSCHHHHHHHHH-TTCCCCCCC--------------
T ss_pred cccCCCCHHHHHHHcCCcHHHHHHHH-cCCCcCcCCCcccccccccCCcc
Confidence 99999999999999999999999999 59999999999999999998654
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.9e-38 Score=309.36 Aligned_cols=228 Identities=25% Similarity=0.332 Sum_probs=181.4
Q ss_pred hccCCCCChHHHHHHHcC-------------CHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccc-cccCCCCCcHH
Q 007755 68 QVTGRHNDTELHLAAQRG-------------DLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVV-NEVNELGETAL 133 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~TpL 133 (591)
+.+|.+|.||||.|+..| +.++++.|++. +..+ +..|..|.|||
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~----------------------g~~~~~~~d~~g~t~L 61 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ----------------------GASLHNQTDRTGETAL 61 (253)
T ss_dssp ----------------------------------------------------------------------CCCTTSCCHH
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc----------------------cCCcccccCCCCCcHH
Confidence 456889999999999988 89999999976 3333 45689999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHH
Q 007755 134 FTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAV 213 (591)
Q Consensus 134 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 213 (591)
|+|+..|+.++|++|+++|++ ++..|..|+||||+|+..|+.+++++|+++++......+..|.||||+|+..|+.++
T Consensus 62 ~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (253)
T 1yyh_A 62 HLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 139 (253)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSH
T ss_pred HHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHH
Confidence 999999999999999998755 567889999999999999999999999999985557788999999999999999999
Q ss_pred HHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccc
Q 007755 214 VNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIV 293 (591)
Q Consensus 214 v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 293 (591)
+++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ +
T Consensus 140 v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~ 216 (253)
T 1yyh_A 140 LEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFAN-R 216 (253)
T ss_dssp HHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-T
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-c
Confidence 9999997 5667888999999999999999999999999999998 67799999999999999999999999999998 8
Q ss_pred cCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 294 MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 294 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+.+|..|+||||+|+++|+.+++++|...
T Consensus 217 ~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 217 DITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 89999999999999999999999999875
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3.1e-38 Score=307.03 Aligned_cols=234 Identities=24% Similarity=0.275 Sum_probs=204.2
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhc--CCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCC
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKY--STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNA 199 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~--~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~ 199 (591)
++.+|.+|.||||+|+..|+.+++++|++. ..+.+++..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCC
Confidence 467799999999999999999999999972 123446778899999999999999999999999999987 56788999
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCC---cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC
Q 007755 200 TPLVSAATRGHTAVVNELLSKDGG---LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG 276 (591)
Q Consensus 200 tpL~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 276 (591)
||||+|+..|+.+++++|++.+.. ..+..+..|.||||+|+..|+.+++++|++.|+++....+..|.||||+|+..
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 999999999999999999998542 56778899999999999999999999999999998444338899999999999
Q ss_pred CCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHH
Q 007755 277 QSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDC 356 (591)
Q Consensus 277 g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~ 356 (591)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ ..++++.
T Consensus 161 ~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~----~~~i~~~ 234 (241)
T 1k1a_A 161 NSLSMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRR----VIDILRG 234 (241)
T ss_dssp TCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSHH----HHHHHTC
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhcC----cHHHHhh
Confidence 999999999999998 88899999999999999999999999999 59999999999999999999877 8888887
Q ss_pred HHhcCc
Q 007755 357 LARCGA 362 (591)
Q Consensus 357 L~~~ga 362 (591)
|.+.++
T Consensus 235 l~~~~a 240 (241)
T 1k1a_A 235 KATRPA 240 (241)
T ss_dssp ------
T ss_pred hccCCC
Confidence 776543
No 15
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-37 Score=306.74 Aligned_cols=235 Identities=24% Similarity=0.267 Sum_probs=217.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+..|.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|++
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRH----------------------GADPVLRKKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc----------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67789999999999999999999986 66688889999999999999999999999999
Q ss_pred cCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccC---------CCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 007755 151 YSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTT---------GPSNATPLVSAATRGHTAVVNELLSKD 221 (591)
Q Consensus 151 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~---------~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 221 (591)
++.+ ++..+..|.||||+|+..|+.+++++|+++++++.... +..|.||||+|+..|+.+++++|+++.
T Consensus 94 ~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 171 (285)
T 1wdy_A 94 KGAD--VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171 (285)
T ss_dssp TTCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred cCCC--CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc
Confidence 8755 56788899999999999999999999999999874332 678999999999999999999999987
Q ss_pred CCcceecCCCCCcHHHHHHHcCC----HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH-cCcccccCC
Q 007755 222 GGLLEISRSNGKNALHFAARQGH----VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE-ADAAIVMLP 296 (591)
Q Consensus 222 ~~~~~~~~~~g~tpLh~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~-~~~~~~~~~ 296 (591)
+..++..|..|.||||+|+..++ .+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++ .|.+ ++.+
T Consensus 172 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~ 249 (285)
T 1wdy_A 172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDT 249 (285)
T ss_dssp CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC-TTCC
T ss_pred CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC-cccc
Confidence 78888899999999999999999 99999999999998 6779999999999999999999999999 6666 8899
Q ss_pred CCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccC
Q 007755 297 DKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 297 d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~ 332 (591)
|..|+||||+|++.|+.+++++|++ .|++++.+|.
T Consensus 250 ~~~g~t~l~~A~~~~~~~i~~~Ll~-~Ga~~~~~d~ 284 (285)
T 1wdy_A 250 DSDGKTALLLAVELKLKKIAELLCK-RGASTDCGDL 284 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH-HSSCSCCSSC
T ss_pred CCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCCcccc
Confidence 9999999999999999999999999 5999998874
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.6e-37 Score=297.60 Aligned_cols=227 Identities=28% Similarity=0.402 Sum_probs=208.5
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+..+.+|.||||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 62 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA----------------------GANIDTCSEDQRTPLMEAAENNHLEAVKY 62 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT----------------------TCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc----------------------CCCcCccCCCCCCHHHHHHHhCCHHHHHH
Confidence 45688999999999999999999999986 66688889999999999999999999999
Q ss_pred HHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCccee
Q 007755 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 227 (591)
|++++.. ++..+..|.||||+|+..|+.+++++|++.++......+..|.||||+|+..|+.+++++|+++ +.+++.
T Consensus 63 Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~ 139 (237)
T 3b7b_A 63 LIKAGAL--VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINI 139 (237)
T ss_dssp HHTTTCC--CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred HHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCc
Confidence 9998755 5677889999999999999999999999999655577888999999999999999999999998 556788
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 007755 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVA 307 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A 307 (591)
.+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..++.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCDL-HAVNIHGDSPLHIAARENRYDCVVLFLSRDSD-VTLKNKEGETPLQCA 217 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC-CCccCCCCCCHHHHH
Confidence 8999999999999999999999999999998 66799999999999999999999999999998 789999999999999
Q ss_pred HHCCcHHHHHHHhc
Q 007755 308 TRKKRTEIVTELLS 321 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~ 321 (591)
+..|+.+.+..+++
T Consensus 218 ~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 218 SLNSQVWSALQMSK 231 (237)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999976666654
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-37 Score=303.13 Aligned_cols=230 Identities=22% Similarity=0.268 Sum_probs=203.1
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHH
Q 007755 69 VTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNEL 148 (591)
Q Consensus 69 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~L 148 (591)
.+|.+|.||||.|++.|+.+++++|++... ..+..++..|..|.||||+|+..|+.+++++|
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 65 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQ------------------QGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHH------------------HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHH------------------hcCCCCCcccccCCCHHHHHHHcCCHHHHHHH
Confidence 468899999999999999999999996210 01567888999999999999999999999999
Q ss_pred HhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC----CCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCc
Q 007755 149 LKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP----SLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL 224 (591)
Q Consensus 149 l~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~----~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 224 (591)
+++|.+ ++..+..|.||||+|+..|+.+++++|++.++ ++ ...+..|.||||+|+..|+.+++++|++++ .+
T Consensus 66 l~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~ 141 (241)
T 1k1a_A 66 VTAGAS--PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERG-AD 141 (241)
T ss_dssp HHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CC
T ss_pred HHcCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 998755 56678899999999999999999999999987 44 567889999999999999999999999984 44
Q ss_pred ceecC-CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcH
Q 007755 225 LEISR-SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTA 303 (591)
Q Consensus 225 ~~~~~-~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~ 303 (591)
++..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 142 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tp 219 (241)
T 1k1a_A 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVRSGAD-SSLKNCHNDTP 219 (241)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCT
T ss_pred cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC-CCCcCCCCCCH
Confidence 55556 78999999999999999999999999998 67799999999999999999999999999998 88999999999
Q ss_pred HHHHHHCCcHHHHHHHhcC
Q 007755 304 LHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 304 Lh~A~~~g~~~iv~~Ll~~ 322 (591)
||+|+..|+.++++.|++.
T Consensus 220 l~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 220 LMVARSRRVIDILRGKATR 238 (241)
T ss_dssp TTTCSSHHHHHHHTC----
T ss_pred HHHHHhcCcHHHHhhhccC
Confidence 9999999999999999874
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.8e-37 Score=296.26 Aligned_cols=228 Identities=25% Similarity=0.328 Sum_probs=210.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..+.||||.|+..|+.+.+++|++.+.. ..+..+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHH
Confidence 45688999999999999999999997543 35778889999999999999999999999999987 66788999999999
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 285 (591)
+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 158 (231)
T 3aji_A 81 ASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHIL 158 (231)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999999998 5567788999999999999999999999999999998 67799999999999999999999999
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcc
Q 007755 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAV 363 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~ 363 (591)
+++|++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||+|+|...+ ..+++++|.++|+.
T Consensus 159 l~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~----~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 159 LFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTPLQVAKGGL----GLILKRLAEGEEAS 230 (231)
T ss_dssp HHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHSCHHH----HHHHHHHHHHHHHC
T ss_pred HhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHhhH----HHHHHHHHcccccc
Confidence 999988 888999999999999999999999999995 9999999999999999998877 88999999988764
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.7e-37 Score=296.91 Aligned_cols=225 Identities=27% Similarity=0.353 Sum_probs=207.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+..+++|||.|++.|+.+.++.+++.. +...+..|..|.||||+|+..|+.+++++|++
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 61 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILAD---------------------KSLATRTDQDSRTALHWACSAGHTEIVEFLLQ 61 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHC---------------------GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhc---------------------hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 456789999999999999999999753 45578889999999999999999999999999
Q ss_pred cCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCC
Q 007755 151 YSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS 230 (591)
Q Consensus 151 ~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 230 (591)
++.+ ++..|..|+||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++ +..++..+.
T Consensus 62 ~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~ 137 (231)
T 3aji_A 62 LGVP--VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDH 137 (231)
T ss_dssp TTCC--SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCT
T ss_pred hCCC--CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCC
Confidence 8754 5778889999999999999999999999999998 56788999999999999999999999988 556778899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHC
Q 007755 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
.|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKAST-NIQDTEGNTPLHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGG 215 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCc-cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhh
Confidence 9999999999999999999999999998 67799999999999999999999999999998 789999999999999999
Q ss_pred CcHHHHHHHhcC
Q 007755 311 KRTEIVTELLSL 322 (591)
Q Consensus 311 g~~~iv~~Ll~~ 322 (591)
++.+++++|+++
T Consensus 216 ~~~~i~~lL~~~ 227 (231)
T 3aji_A 216 LGLILKRLAEGE 227 (231)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHccc
Confidence 999999999873
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.1e-37 Score=320.85 Aligned_cols=235 Identities=21% Similarity=0.243 Sum_probs=209.9
Q ss_pred hccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007755 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
+...+..|..|.||||+||..|+.++|++|+++|.+ ++..|..|.||||+|+..|+.+++++|++++++.. +..|
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~g 84 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS---LWHG 84 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC---CBTT
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc---ccCC
Confidence 455677899999999999999999999999998754 67789999999999999999999999999998653 3578
Q ss_pred CCHHHHHHHcCCHHHHHHHHhcc---CCccee-----------------cCCCCCcHHHHHHHcC--CHHHHHHHHhcCc
Q 007755 199 ATPLVSAATRGHTAVVNELLSKD---GGLLEI-----------------SRSNGKNALHFAARQG--HVDVVKALLSKDP 256 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~Ll~~~---~~~~~~-----------------~~~~g~tpLh~A~~~g--~~~~v~~Ll~~~~ 256 (591)
.||||+|+..|+.+++++|++.. +...+. .+..|.||||+|+..| +.+++++|+++|+
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 99999999999999999999872 222333 7789999999999999 9999999999999
Q ss_pred ccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCccc----ccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccC
Q 007755 257 QLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAI----VMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 257 ~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~ 332 (591)
++ +..|..|+||||+|+..|+.+++++|+++|++. ++.+|..|+||||+|+..|+.+++++|++ .|+|++.+|.
T Consensus 165 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d~ 242 (364)
T 3ljn_A 165 SP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMEDN 242 (364)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCCT
T ss_pred CC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCC
Confidence 98 677999999999999999999999999998763 78889999999999999999999999999 5999999999
Q ss_pred CCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007755 333 DHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 333 ~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
.|+||||+|+..+ +.+++++|++.|+..
T Consensus 243 ~g~tpL~~A~~~g----~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 243 EHTVPLYLSVRAA----MVLLTKELLQKTDVF 270 (364)
T ss_dssp TSCCHHHHHHHTC----CHHHHHHHHHHSCHH
T ss_pred CCCCHHHHHHHhC----hHHHHHHHHHcCCch
Confidence 9999999999999 899999999998764
No 21
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=307.03 Aligned_cols=229 Identities=24% Similarity=0.303 Sum_probs=205.3
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHH
Q 007755 69 VTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNEL 148 (591)
Q Consensus 69 ~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~L 148 (591)
..+..|.||||.|+..|+.++++.|++. +..++.+|..|.||||+|+..|+.+++++|
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 111 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQ----------------------GWAVNIITADHVSPLHEACLGGHLSCVKIL 111 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHT----------------------TCCSCEECTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHC----------------------CCCCCCcCCCCCCHHHHHHHCCcHHHHHHH
Confidence 4678899999999999999999999986 666889999999999999999999999999
Q ss_pred HhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceec
Q 007755 149 LKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEIS 228 (591)
Q Consensus 149 l~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~ 228 (591)
++++++ ++..|..|.||||+|+..|+.+++++|+++++++.. +..|.||||+|+..|+.+++++|+++ +.+++..
T Consensus 112 l~~ga~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~ 186 (285)
T 3d9h_A 112 LKHGAQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHK 186 (285)
T ss_dssp HHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred HHCCCC--CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc
Confidence 998654 577899999999999999999999999999998743 44599999999999999999999998 5567888
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007755 229 RSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 229 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
|..|.||||+|+..|+.+++++|++.|+++. .|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 187 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 187 ISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVELVP 263 (285)
T ss_dssp BTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHhc
Confidence 9999999999999999999999999999984 388999999999999999999999999998 8999999999999999
Q ss_pred HCCcHHHHHHHhcCCCCCccc
Q 007755 309 RKKRTEIVTELLSLPDTNVNA 329 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~~~~~ 329 (591)
++.+++++|+++.|+++..
T Consensus 264 --~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 264 --PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp --TTSHHHHHHHHHC------
T ss_pred --CccHHHHHHHHhhccCCCC
Confidence 4568999999976777543
No 22
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=301.11 Aligned_cols=221 Identities=24% Similarity=0.313 Sum_probs=199.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007755 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
+|+||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 589999999999999999999998754 6778899999999999999999999999999987 6778899999999999
Q ss_pred cCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007755 208 RGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 208 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 287 (591)
.|+.+++++|++++.. .+ .+.+|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 SGSWDCVNLLLQHGAS-VQ-PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HTCHHHHHHHHHTTCC-SS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 9999999999998544 33 3566999999999999999999999999998 6779999999999999999999999999
Q ss_pred cCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcc
Q 007755 288 ADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAV 363 (591)
Q Consensus 288 ~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~ 363 (591)
+|++ ++. |..|+||||+|+..|+.+++++|++. |+|++.+|..|+||+|+|...+ ++.++|.+.+..
T Consensus 156 ~g~~-~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpl~~A~~~~------~~~~~ll~~~~~ 222 (261)
T 2xai_A 156 SGAD-VNQ-GKGQDSPLHAVARTASEELACLLMDF-GADTQAKNAEGKRPVELVPPES------PLAQLFLEREGP 222 (261)
T ss_dssp HTCC-TTC-CBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSCTTC------THHHHHHHC-CC
T ss_pred cCCC-CCC-CCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCChhhhccccc------cHHHHHHhccCC
Confidence 9998 554 88999999999999999999999995 9999999999999999998544 478888887654
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.9e-37 Score=295.00 Aligned_cols=222 Identities=24% Similarity=0.257 Sum_probs=198.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCC--CCCcccCCCCCCCHHHHHH
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHD--PSLSQTTGPSNATPLVSAA 206 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpL~~A~ 206 (591)
|+||||.|+..|+.+++++|++.+... ....|..|.||||+|+..|+.+++++|++++ +++....+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 789999999999999999999987543 3457889999999999999999999999999 5554447889999999999
Q ss_pred HcCCHHHHHHHHhcc-CCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007755 207 TRGHTAVVNELLSKD-GGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 207 ~~g~~~~v~~Ll~~~-~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 285 (591)
..|+.+++++|++++ ..+++..+..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999985 3667788999999999999999999999999999998 67799999999999999999999999
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007755 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++.|...++.+|..|+||||+|+..|+.+++++|++..|++++.+|..|+||+|+|.+.+ +.++|.+
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~-------~~~~l~~ 226 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ-------VKKFFLN 226 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTT-------HHHHHHT
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHH-------HHHHHHh
Confidence 999944489999999999999999999999999994369999999999999999997543 5555554
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.6e-36 Score=289.95 Aligned_cols=220 Identities=24% Similarity=0.291 Sum_probs=197.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 007755 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYST 153 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~ 153 (591)
|+||||.|++.|+.++++.|++.. ....+..|..|.||||+|+..|+.+++++|+++++
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 60 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK---------------------PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKME 60 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC---------------------GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC---------------------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 679999999999999999999863 33455689999999999999999999999999987
Q ss_pred CcCCcc-CCCCCCcHHHHHHHhCcHHHHHHHHhCC--CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCC
Q 007755 154 KEGLTR-KNRSGFDPLHIAAVQGHHAIVQVLLDHD--PSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS 230 (591)
Q Consensus 154 ~~~~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~--~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 230 (591)
+.++.. .+..|.||||+|+..|+.+++++|++++ +++ +..+..|.||||+|+..|+.+++++|+++ +.+++..|.
T Consensus 61 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~ 138 (228)
T 2dzn_A 61 NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDK 138 (228)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCT
T ss_pred cccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCC
Confidence 666666 8889999999999999999999999998 665 66788899999999999999999999998 667888899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCcHHHHHHhCCCHHHHHHHH-HcCcccccCCCCCCCcHHHHHH
Q 007755 231 NGKNALHFAARQGHVDVVKALLSKD-PQLARRTDKKGQTALHMAVKGQSCEVVKLLL-EADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll-~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
.|.||||+|+..|+.+++++|++.+ .++ +..|..|+||||+|+..|+.+++++|+ +.|++ ++.+|.+|.||||+|+
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~-~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAV-NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE-YDLVDNKGAKAEDVAL 216 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC-SCCBCTTSCBGGGGCS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcccc-cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCcHHHHHH
Confidence 9999999999999999999999999 555 778999999999999999999999999 88888 8899999999999997
Q ss_pred HCCcHHHHHHHhc
Q 007755 309 RKKRTEIVTELLS 321 (591)
Q Consensus 309 ~~g~~~iv~~Ll~ 321 (591)
.. +++++|++
T Consensus 217 ~~---~~~~~l~~ 226 (228)
T 2dzn_A 217 NE---QVKKFFLN 226 (228)
T ss_dssp ST---THHHHHHT
T ss_pred HH---HHHHHHHh
Confidence 66 45556654
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=304.25 Aligned_cols=217 Identities=27% Similarity=0.365 Sum_probs=172.1
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc------CCccCCCCCCcHHHHHHHhCcHH-HHHHHHhCCCCCcccCCC
Q 007755 124 EVNELGETALFTAADKGHIEVVNELLKYSTKE------GLTRKNRSGFDPLHIAAVQGHHA-IVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 124 ~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~------~~~~~~~~g~t~Lh~A~~~g~~~-iv~~Ll~~~~~~~~~~~~ 196 (591)
..|..+.+||+.||..|+.++|++||+.+... .++..+..|.||||.|+..++.+ +++.|++.|+++ +..|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCC
Confidence 34667789999999999999999999987643 24556778999999999888764 889999999998 67888
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhC
Q 007755 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKG 276 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~ 276 (591)
+|.||||+|+..|+.+++++|++. +.+++..+.+|.||+|.|+..++.+++++|++.|+++ +..|..|+||||+|+..
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSG 162 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHC
Confidence 999999999999999999999988 5567788999999999999999999999999999998 67799999999999999
Q ss_pred CCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007755 277 QSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 277 g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~ 345 (591)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|+|++.+|..|+||||+|++.+
T Consensus 163 g~~~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 163 GHHELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp TCGGGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTC
T ss_pred CCHHHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCC
Confidence 999999999999998 89999999999999999999999999999 49999999999999999998755
No 26
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.1e-37 Score=317.54 Aligned_cols=257 Identities=20% Similarity=0.210 Sum_probs=219.2
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCC-CCCCcHHHHHHHhCcHHHHHHHH--------hCCCCCccc
Q 007755 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHHAIVQVLL--------DHDPSLSQT 193 (591)
Q Consensus 123 ~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll--------~~~~~~~~~ 193 (591)
+..|..|.||||+|+..|+ +++++|++. +++..| ..|+||||+|+..|+.+++++|+ +.|+++ +.
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~----~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~ 161 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPITRE----SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NA 161 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCSTT----TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TC
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhccc----cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cC
Confidence 3458889999999999665 788877652 355666 78999999999999998888776 788887 66
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCCcHH
Q 007755 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKD---PQLARRTDKKGQTAL 270 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~---~~~~~~~d~~g~t~L 270 (591)
.|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+ .++ +..|..|.|||
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~-ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L 239 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKA-GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTAL 239 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHC-CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHH
Confidence 788999999999999999999999998 5667888999999999999999999999999987 455 66799999999
Q ss_pred HHHHhCC---CHHHHHHHHHcCcccccC--------CCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHH
Q 007755 271 HMAVKGQ---SCEVVKLLLEADAAIVML--------PDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALD 339 (591)
Q Consensus 271 h~A~~~g---~~~~v~~Ll~~~~~~~~~--------~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~ 339 (591)
|+|+..+ +.+++++|+++|++ ++. .|..|+||||+|+..|+.+++++|++..+++++.+|..|+||||
T Consensus 240 ~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~ 318 (373)
T 2fo1_E 240 MIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM 318 (373)
T ss_dssp HHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred HHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence 9999988 89999999999987 443 67799999999999999999999998767999999999999999
Q ss_pred HHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhhhHHHH
Q 007755 340 IAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLEQ 392 (591)
Q Consensus 340 ~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 392 (591)
+|+..+ +.+++++|++.|++...........+..+......++.+.|.+
T Consensus 319 ~A~~~g----~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 319 LAAQEG----RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp HHHHHT----CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHcC----CHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999 8999999999999887766666777777776666666655544
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=9.2e-37 Score=306.88 Aligned_cols=238 Identities=25% Similarity=0.303 Sum_probs=209.7
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007755 72 RHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 72 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
..|.||||.|+..|+.++++.|++. +..++..|..|.||||+|+..|+.++|++|+++
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 95 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLER----------------------GADINYANVDGLTALHQACIDDNVDMVKFLVEN 95 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHH----------------------CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHc----------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4567999999999999999999986 666888999999999999999999999999998
Q ss_pred CCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCC
Q 007755 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSN 231 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 231 (591)
|++ ++..|..|.||||+|+..|+.+++++|+++|+++ ...+..|.||||+|+..|+.++++.++...+...+..+..
T Consensus 96 ga~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 172 (299)
T 1s70_B 96 GAN--INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKE 172 (299)
T ss_dssp TCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhh
Confidence 755 5778889999999999999999999999999997 6678899999999999999999999998876665544444
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCC
Q 007755 232 GKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKK 311 (591)
Q Consensus 232 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g 311 (591)
+.++++ ..+..++..+.......+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|
T Consensus 173 ~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 173 EERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp HHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTT
T ss_pred hhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcC
Confidence 444443 3445666666665566788999999999999999999999999988 8899999999999999999
Q ss_pred cHHHHHHHhcCCCCCcccccCCCCCHHHHHhhC
Q 007755 312 RTEIVTELLSLPDTNVNALTRDHKTALDIAEGL 344 (591)
Q Consensus 312 ~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~ 344 (591)
+.+++++|++. |++++.+|..|+||||+|.+.
T Consensus 244 ~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 244 KEEACRILVEN-LCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCTTTSCCSG
T ss_pred CHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHH
Confidence 99999999995 999999999999999999653
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=301.13 Aligned_cols=227 Identities=26% Similarity=0.334 Sum_probs=172.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCH-HHHHHHH
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHI-EVVNELL 149 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~-~~v~~Ll 149 (591)
|.++.+||+.||+.|+.++|++||+....... .....++..|..|.||||.|+..++. +++++|+
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~--------------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll 73 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLE--------------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP 73 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------------------
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccc--------------cccccccccCccCCCHHHHHHHhCCHHHHHHHHH
Confidence 45566999999999999999999986432110 01334677888999999999998876 4889999
Q ss_pred hcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecC
Q 007755 150 KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 150 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 229 (591)
+.|++ ++..|.+|+||||+|+..|+.+++++|++.++++ ...+..|.||+++|+..++.+++++|++. +.+++..|
T Consensus 74 ~~Gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-g~~~n~~d 149 (269)
T 4b93_B 74 ASGLG--VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDS-NAKPNKKD 149 (269)
T ss_dssp -CCCC--TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCC
T ss_pred HCCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHC-CCCCCCCC
Confidence 98765 5778999999999999999999999999999997 66788999999999999999999999998 56678899
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHH
Q 007755 230 SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATR 309 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~ 309 (591)
..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLLHGAS-VQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCSGGGSCT
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHh
Confidence 99999999999999999999999999998 77799999999999999999999999999998 89999999999999998
Q ss_pred CCcHHHHHHH
Q 007755 310 KKRTEIVTEL 319 (591)
Q Consensus 310 ~g~~~iv~~L 319 (591)
+++ ++++|
T Consensus 228 ~~~--i~~lL 235 (269)
T 4b93_B 228 NSK--IMELL 235 (269)
T ss_dssp TCH--HHHHT
T ss_pred CCc--HHHHH
Confidence 875 44433
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=288.22 Aligned_cols=233 Identities=26% Similarity=0.360 Sum_probs=212.1
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++..|..|.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++++++.....+..|.||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCCh
Confidence 355688999999999999999999999998754 577888999999999999999999999999999877777789999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC-HH
Q 007755 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS-CE 280 (591)
Q Consensus 202 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~-~~ 280 (591)
||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|+++++++ +..|..|.||||+|+..++ .+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSST
T ss_pred hHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHH
Confidence 9999999999999999988 5567778999999999999999999999999999998 6779999999999996555 89
Q ss_pred HHHHHHHcCcccccCCCC-CCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007755 281 VVKLLLEADAAIVMLPDK-FGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 281 ~v~~Ll~~~~~~~~~~d~-~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++++|++.+++ ++..+. .|+||||+|+..|+.+++++|+++ |++++.+|..|+|||++|++.+ ..+++++|.+
T Consensus 158 ~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~----~~~~v~~L~~ 231 (240)
T 3eu9_A 158 PTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALDLAKQRK----NVWMINHLQE 231 (240)
T ss_dssp THHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHHHHHHTT----CHHHHHHHHH
T ss_pred HHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcC----cHHHHHHHHH
Confidence 99999999998 666676 899999999999999999999995 9999999999999999999999 8999999999
Q ss_pred cCccc
Q 007755 360 CGAVR 364 (591)
Q Consensus 360 ~ga~~ 364 (591)
.++..
T Consensus 232 ~~~~~ 236 (240)
T 3eu9_A 232 ARQAK 236 (240)
T ss_dssp HC---
T ss_pred hhhcc
Confidence 98764
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.8e-36 Score=297.08 Aligned_cols=249 Identities=22% Similarity=0.234 Sum_probs=192.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC-CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT 200 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 200 (591)
++.+|..|.||||+|+..|+.++|++|++++++.. ++..+..|+||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 56789999999999999999999999999876643 6778899999999999999999999999999998 577889999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCcc------------eecCCCCCcHHHHHHHcCCHHHHH-HHHhcCcccccccCCCCC
Q 007755 201 PLVSAATRGHTAVVNELLSKDGGLL------------EISRSNGKNALHFAARQGHVDVVK-ALLSKDPQLARRTDKKGQ 267 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~Ll~~~~~~~------------~~~~~~g~tpLh~A~~~g~~~~v~-~Ll~~~~~~~~~~d~~g~ 267 (591)
|||+|+..|+.+++++|++++.... ......+.++++.++..+...... .+...+.++ +..|..|+
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~ 159 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAENYDGH 159 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT-TCCCTTSC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC-CCcCCCCc
Confidence 9999999999999999998754321 122345677787777665544443 333445555 67799999
Q ss_pred cHHHHHHhCCCHHHHHHHHHcCcccccCCCC-CCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCC
Q 007755 268 TALHMAVKGQSCEVVKLLLEADAAIVMLPDK-FGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPS 346 (591)
Q Consensus 268 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~ 346 (591)
||||+|+..|+.+++++|+++|++ ++.++. .|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..+
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~- 236 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRP- 236 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSS-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcC-
Confidence 999999999999999999999998 666664 599999999999999999999995 9999999999999999999999
Q ss_pred ChhhHHHHHHHHhcCcccccccCCchHHhhhh
Q 007755 347 SEEASEIKDCLARCGAVRANELNQPRDELRKT 378 (591)
Q Consensus 347 ~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~ 378 (591)
+.+++++|+++|++..........++...
T Consensus 237 ---~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 237 ---NPILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp ---CHHHHHHHHHTTCCCCCCC----------
T ss_pred ---CcHHHHHHHHcCCCcCcCCCccccccccc
Confidence 89999999999999776665555555433
No 31
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1e-35 Score=305.70 Aligned_cols=249 Identities=27% Similarity=0.249 Sum_probs=221.0
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCC
Q 007755 120 SVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNA 199 (591)
Q Consensus 120 ~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~ 199 (591)
...+..+..|.|+||.|++.|+.+.|+.|+.. .+.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.
T Consensus 15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~ 92 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGL 92 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred eeeeeeccccchhHHHHHHcCCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCC
Confidence 34455677789999999999999999999985 34557788999999999999999999999999999997 66788999
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCccccc-------------------
Q 007755 200 TPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLAR------------------- 260 (591)
Q Consensus 200 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~------------------- 260 (591)
||||+|+..|+.+++++|+++ +..++..|..|.||||+|+..|+.+++++|+++|+++..
T Consensus 93 t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 93 VPLHNACSYGHYEVTELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHH
Confidence 999999999999999999998 566788899999999999999999999999999887521
Q ss_pred ----------------------------------ccCCCCCcHHHHHHhC---CCHHHHHHHHHcCcccccCCCCCCCcH
Q 007755 261 ----------------------------------RTDKKGQTALHMAVKG---QSCEVVKLLLEADAAIVMLPDKFGNTA 303 (591)
Q Consensus 261 ----------------------------------~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~T~ 303 (591)
..+..|.||||+|+.. ++.+++++|++.|++ ++.+|..|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~ 250 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN-VNEKNKDFMTP 250 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC-cCCcCCCCCCH
Confidence 2346788999999998 668999999999998 88899999999
Q ss_pred HHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhh
Q 007755 304 LHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRK 377 (591)
Q Consensus 304 Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~ 377 (591)
||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ +.+++++|+++|++...........+..
T Consensus 251 L~~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~~~~~~~g~tal~~ 319 (351)
T 3utm_A 251 LHVAAERAHNDVMEVLHK-HGAKMNALDSLGQTALHRAALAG----HLQTCRLLLSYGSDPSIISLQGFTAAQM 319 (351)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT----CHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcC----cHHHHHHHHHcCCCCCCcCCCCCChhhh
Confidence 999999999999999999 59999999999999999999999 8999999999999876665555554443
No 32
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.1e-35 Score=300.37 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=211.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCC-CCCCcHHHHHHHhCcHHHHHHHHhCCCCCc-------------
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHHAIVQVLLDHDPSLS------------- 191 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~------------- 191 (591)
+.+|.||||.||+.|+.++|++||++|++. +.++ ..|+||||+|+..|+.++|++|+++|+++.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadv--n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANV--NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCT--TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCC--CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 345789999999999999999999998764 4454 459999999999999999999999988653
Q ss_pred -------------------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCc---------ceecCCCCCcHHHHHHHcC
Q 007755 192 -------------------QTTGPSNATPLVSAATRGHTAVVNELLSKDGGL---------LEISRSNGKNALHFAARQG 243 (591)
Q Consensus 192 -------------------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~---------~~~~~~~g~tpLh~A~~~g 243 (591)
+..|..|.||||+|+..|+.+++++|++++... ....+..|.||||+|+..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 245677899999999999999999999884322 1234567999999999999
Q ss_pred CHHHHHHHHhc-CcccccccCCCCCcHHHHHHhCCC----HHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 007755 244 HVDVVKALLSK-DPQLARRTDKKGQTALHMAVKGQS----CEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTE 318 (591)
Q Consensus 244 ~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~ 318 (591)
+.+++++|+++ |+++ +..|..|.|+||.++..+. .+++++|+++|++ ++.+|..|+||||+|+..|+.++++.
T Consensus 180 ~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~ 257 (337)
T 4g8k_A 180 HVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQR 257 (337)
T ss_dssp CHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHH
Confidence 99999999964 7887 7779999999998875433 4688999999998 88999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhhhhhhhhhhHHH
Q 007755 319 LLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVTQIKKDVHTQLE 391 (591)
Q Consensus 319 Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 391 (591)
|+...|++++.+|.+|+||||+|+..+ +.+++++|+++|++... .+.+..+......++.+.|-
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g----~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELK----LKKIAELLCKRGASTDC-----GDLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTT----CHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHHHHHHHH
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHHHHHHHH
Confidence 999889999999999999999999999 89999999999997543 23455555555555554443
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=283.77 Aligned_cols=231 Identities=25% Similarity=0.275 Sum_probs=205.6
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 007755 70 TGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELL 149 (591)
Q Consensus 70 ~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll 149 (591)
.|..|.|+||.|+..|+.+++++|++. +..++..|..|.||||+|+..|+.+++++|+
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~----------------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 62 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEA----------------------GYDVRQPDKENVTLLHWAAINNRIDLVKYYI 62 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHT----------------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHc----------------------CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 466788999999999999999999986 6668888999999999999999999999999
Q ss_pred hcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecC
Q 007755 150 KYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 150 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 229 (591)
+++...+ ...+..|.||||+|+..|+.+++++|++.|+++ ...+..|.||||+|+..|+.+++++|+++ +..++..+
T Consensus 63 ~~~~~~~-~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~ 139 (240)
T 3eu9_A 63 SKGAIVD-QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMD 139 (240)
T ss_dssp HTTCCTT-CCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred HcCCcch-hhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccC
Confidence 9876542 344556999999999999999999999999988 56788999999999999999999999998 55677889
Q ss_pred CCCCcHHHHHHHcCC-HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007755 230 SNGKNALHFAARQGH-VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~-~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
..|.||||+|+..++ .+++++|++.++++....+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 140 ~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQNIKGESALDLAK 218 (240)
T ss_dssp TTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBCTTSCBHHHHHH
T ss_pred CCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHH
Confidence 999999999997766 89999999999998444334899999999999999999999999988 7899999999999999
Q ss_pred HCCcHHHHHHHhcCCCCCc
Q 007755 309 RKKRTEIVTELLSLPDTNV 327 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~~~ 327 (591)
+.|+.+++++|++. +.+.
T Consensus 219 ~~~~~~~v~~L~~~-~~~~ 236 (240)
T 3eu9_A 219 QRKNVWMINHLQEA-RQAK 236 (240)
T ss_dssp HTTCHHHHHHHHHH-C---
T ss_pred HcCcHHHHHHHHHh-hhcc
Confidence 99999999999984 4443
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.4e-35 Score=296.37 Aligned_cols=224 Identities=20% Similarity=0.190 Sum_probs=202.6
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
++.+|..|.||||+|+..|+.++|++|+++|++. +.. +|.||||+|+..|+.+++++|+++|+++ +..|..|.||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~ 98 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK--NLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTA 98 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG--SCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC--CCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcH
Confidence 7889999999999999999999999999987654 333 4999999999999999999999999998 5678899999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcceecCCCC-CcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHH
Q 007755 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNG-KNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCE 280 (591)
Q Consensus 202 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~ 280 (591)
||+|+..|+.+++++|+++ +.+++..+..| .||||+|+..|+.+++++|++++++... ...|+||||+|+..|+.+
T Consensus 99 L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVD 175 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHH
Confidence 9999999999999999999 66788889999 8999999999999999999999987622 238999999999999999
Q ss_pred HHHHHHHcCcccccCCCCCCCcH-HHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHh
Q 007755 281 VVKLLLEADAAIVMLPDKFGNTA-LHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLAR 359 (591)
Q Consensus 281 ~v~~Ll~~~~~~~~~~d~~g~T~-Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~ 359 (591)
++++|+++|++ ++.+|..|+|| ||+|+..|+.+++++|+++ |++++.+|. .|+..+ +.+++++|++
T Consensus 176 ~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~-gad~~~~~~-------~a~~~~----~~~iv~~Ll~ 242 (285)
T 3kea_A 176 MMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKY-DINIYSANL-------ENVLLD----DAEIAKMIIE 242 (285)
T ss_dssp HHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS-CBCSTTTTG-------GGGTTT----CHHHHHHHHH
T ss_pred HHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCCCCCh-------hhhhcC----CHHHHHHHHH
Confidence 99999999998 88999999998 9999999999999999995 999999984 455566 8999999999
Q ss_pred cCccccc
Q 007755 360 CGAVRAN 366 (591)
Q Consensus 360 ~ga~~~~ 366 (591)
+|++...
T Consensus 243 ~g~~~~~ 249 (285)
T 3kea_A 243 KHVEYKS 249 (285)
T ss_dssp HHHHHTT
T ss_pred cCCCCCC
Confidence 9987543
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.4e-35 Score=282.23 Aligned_cols=217 Identities=21% Similarity=0.266 Sum_probs=189.3
Q ss_pred CCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 007755 140 GHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLS 219 (591)
Q Consensus 140 g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 219 (591)
|+.+++++|++++.+.+ ...|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcc-cccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67888889998776532 344778999999999999999999999998887 5677889999999999999999999999
Q ss_pred ccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCC
Q 007755 220 KDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKF 299 (591)
Q Consensus 220 ~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 299 (591)
+++...+..+..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 157 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNR 157 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCC
Confidence 877677888889999999999999999999999999887 66788999999999999999999999999887 7888999
Q ss_pred CCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccc
Q 007755 300 GNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRA 365 (591)
Q Consensus 300 g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 365 (591)
|+||||+|+..|+.+++++|+++ |++++.+|..|+||+++|+..+ +.+++++|.++|+...
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~----~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERM----HHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHHTTCSSC
T ss_pred CcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCHHHHHHHhc----chHHHHHHHHcCCCcc
Confidence 99999999999999999999994 8999999999999999999988 8899999999988754
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-34 Score=277.34 Aligned_cols=214 Identities=23% Similarity=0.322 Sum_probs=191.6
Q ss_pred CCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccc-cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCC
Q 007755 85 GDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE-VNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRS 163 (591)
Q Consensus 85 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~ 163 (591)
|+.+++++|++. +..++. .|..|.||||+|+..|+.+++++|++++.+ ++..|..
T Consensus 2 g~~~~i~~Ll~~----------------------g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~ 57 (223)
T 2f8y_A 2 DAPAVISDFIYQ----------------------GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNM 57 (223)
T ss_dssp ---CCEETTEET----------------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTT
T ss_pred CcHHHHHHHHHc----------------------CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC--CCCcCCC
Confidence 566777777765 334444 488999999999999999999999998755 5678899
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcC
Q 007755 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQG 243 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 243 (591)
|.||||+|+..|+.+++++|+++++......+..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|
T Consensus 58 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 58 GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcC
Confidence 999999999999999999999999865577889999999999999999999999997 5667888999999999999999
Q ss_pred CHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCC
Q 007755 244 HVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLP 323 (591)
Q Consensus 244 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~ 323 (591)
+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|++.++.+++++|+++
T Consensus 137 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~- 213 (223)
T 2f8y_A 137 NVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEY- 213 (223)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-
T ss_pred CHHHHHHHHHcCCCC-CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHc-
Confidence 999999999999998 67799999999999999999999999999998 788999999999999999999999999995
Q ss_pred CCC
Q 007755 324 DTN 326 (591)
Q Consensus 324 g~~ 326 (591)
|+.
T Consensus 214 g~~ 216 (223)
T 2f8y_A 214 NLV 216 (223)
T ss_dssp TCS
T ss_pred CCC
Confidence 654
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.4e-35 Score=286.12 Aligned_cols=219 Identities=24% Similarity=0.291 Sum_probs=187.3
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc--CCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC
Q 007755 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKE--GLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT 200 (591)
Q Consensus 123 ~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~--~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t 200 (591)
+.+|.+|.||||+|+..|+.+++++|++.+... +++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 346889999999999999999999999986542 57788999999999999999999999999999987 667889999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCC-----cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCC-CCCcHHHHHH
Q 007755 201 PLVSAATRGHTAVVNELLSKDGG-----LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDK-KGQTALHMAV 274 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~-~g~t~Lh~A~ 274 (591)
|||+|+..|+.+++++|++.+.. ..+..+..|.||||+|+..|+.+++++|+++|+++ +..+. .|+||||+|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHHHHH
Confidence 99999999999999999998542 25667888999999999999999999999999998 55565 9999999999
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcc--cccCCCCCHHHHHhhCC
Q 007755 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVN--ALTRDHKTALDIAEGLP 345 (591)
Q Consensus 275 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~--~~d~~G~t~L~~A~~~~ 345 (591)
..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++ |++.. ..+..|.||.+.+....
T Consensus 160 ~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 160 DLQNPDLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQL-TLENLQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp HTTCHHHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTT-SCGGGSSCCCCCTTTCCCCC----
T ss_pred HcCCHHHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHc-chhhhhcCCccchHHHHhhhcccc
Confidence 99999999999999988 888999999999999999999999999994 88766 88999999988765543
No 38
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-34 Score=289.36 Aligned_cols=227 Identities=16% Similarity=0.177 Sum_probs=200.2
Q ss_pred hhccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHH
Q 007755 67 KQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 67 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~ 146 (591)
....|.+|.||||+|+..|+.+++++|++. +..++.. +|.||||+|+..|+.++++
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------g~~~~~~--~g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNA----------------------GALKNLL--ENEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT----------------------TGGGSCC--TTCCHHHHHTTSSSCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhC----------------------CCCCCCC--CCCCHHHHHHHcCCHHHHH
Confidence 356788999999999999999999999986 5556666 4999999999999999999
Q ss_pred HHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC-CCHHHHHHHcCCHHHHHHHHhccCCcc
Q 007755 147 ELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN-ATPLVSAATRGHTAVVNELLSKDGGLL 225 (591)
Q Consensus 147 ~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g-~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 225 (591)
+|+++|++ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..| .||||+|+..|+.+++++|++++....
T Consensus 80 ~Ll~~ga~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 80 ILLFSGLD--DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHHHCCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 99998765 5678889999999999999999999999999997 5677777 799999999999999999999865442
Q ss_pred eecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcH-HHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHH
Q 007755 226 EISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTA-LHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTAL 304 (591)
Q Consensus 226 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~-Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~L 304 (591)
+ ...|.||||+|+..|+.+++++|+++|+++ +..|..|+|| ||+|+..|+.+++++|+++|++ ++.+|
T Consensus 157 ~--~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad-~~~~~------- 225 (285)
T 3kea_A 157 D--LAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN-IYSAN------- 225 (285)
T ss_dssp C--CSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC-STTTT-------
T ss_pred c--ccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC-CCCCC-------
Confidence 2 128999999999999999999999999998 6779999998 9999999999999999999998 66666
Q ss_pred HHHHHCCcHHHHHHHhcCCCCCcccccC
Q 007755 305 HVATRKKRTEIVTELLSLPDTNVNALTR 332 (591)
Q Consensus 305 h~A~~~g~~~iv~~Ll~~~g~~~~~~d~ 332 (591)
+.|+..|+.+++++|+++ |++++..+.
T Consensus 226 ~~a~~~~~~~iv~~Ll~~-g~~~~~~~~ 252 (285)
T 3kea_A 226 LENVLLDDAEIAKMIIEK-HVEYKSDSY 252 (285)
T ss_dssp GGGGTTTCHHHHHHHHHH-HHHHTTCTT
T ss_pred hhhhhcCCHHHHHHHHHc-CCCCCCccc
Confidence 367889999999999994 777665543
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-34 Score=293.66 Aligned_cols=262 Identities=15% Similarity=0.131 Sum_probs=194.9
Q ss_pred cchhhccchhhhccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccc---cccCCCCCcHH
Q 007755 57 IDQAGKKKYVKQVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVV---NEVNELGETAL 133 (591)
Q Consensus 57 ~~~~~~~~~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~TpL 133 (591)
++...+........+..|.++++ |+.++++.||+.........+... ..+... ........+.+
T Consensus 35 v~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a--------~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 35 TSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTS--------LNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp CCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------------
T ss_pred HHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHh--------hhcccccccccccCCccchh
Confidence 33444455555667788999988 999999999975311000000000 000000 00111223446
Q ss_pred HHHHHcCCHHHHHHHHhcCCCcCCcc-CCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC--
Q 007755 134 FTAADKGHIEVVNELLKYSTKEGLTR-KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGH-- 210 (591)
Q Consensus 134 ~~Aa~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~-- 210 (591)
|+|+..+..++++.|++.+.+ ++. .|..|+||||+|+..|+.++|++|+++|+++ +..|..|.||||+|+..|+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~d--vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLN--LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCC--SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHH
T ss_pred HHHHHhhHHHHHHHHHhcCCC--cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccc
Confidence 899999999999999997654 566 7899999999999999999999999999998 6788999999999999998
Q ss_pred -HHHHHHHHhccCCcceecCCCCCcHHHHHHH----cCCHHHHHHHHhc--------------------CcccccccCCC
Q 007755 211 -TAVVNELLSKDGGLLEISRSNGKNALHFAAR----QGHVDVVKALLSK--------------------DPQLARRTDKK 265 (591)
Q Consensus 211 -~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~----~g~~~~v~~Ll~~--------------------~~~~~~~~d~~ 265 (591)
.++++.|++.....++..|..|.||||+|+. .|+.+++++|++. ++++ +..|..
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~ 257 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGE 257 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-cccccc
Confidence 6888888887666788999999999999999 8999999999987 6666 667899
Q ss_pred CCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007755 266 GQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 266 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~ 345 (591)
|+||||.|+. +++|++++ ++.+|..|+||||+|+..|+.+++++|+++ |+|++.+|..|+||||+|++.+
T Consensus 258 g~t~L~~a~~------~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 258 RKDSILENLD------LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp --CHHHHHCS------HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred CCChhHHHHH------HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 9999999986 89999983 788999999999999999999999999995 9999999999999999998653
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.7e-34 Score=275.47 Aligned_cols=221 Identities=24% Similarity=0.270 Sum_probs=188.5
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHH
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNE 147 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~ 147 (591)
+..|.+|.||||.|+..|+.++++.|++..... +..++..|..|.||||+|+..|+.+++++
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 63 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGD------------------LAFLNFQNNLQQTPLHLAVITNQPEIAEA 63 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----------------------CCCCCCCCTTCCCHHHHHHHTTCHHHHHC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhcc------------------HHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 456889999999999999999999999764311 44688999999999999999999999999
Q ss_pred HHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCC-----cccCCCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 007755 148 LLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSL-----SQTTGPSNATPLVSAATRGHTAVVNELLSKDG 222 (591)
Q Consensus 148 Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~-----~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 222 (591)
|+++|++ ++..|..|.||||+|+..|+.+++++|++++++. ....+..|.||||+|+..|+.+++++|+++ +
T Consensus 64 Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g 140 (236)
T 1ikn_D 64 LLGAGCD--PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-G 140 (236)
T ss_dssp CCSCCCC--SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-T
T ss_pred HHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-C
Confidence 9998755 5678889999999999999999999999998653 356778899999999999999999999998 4
Q ss_pred CcceecCC-CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccc-cCCCCCC
Q 007755 223 GLLEISRS-NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIV-MLPDKFG 300 (591)
Q Consensus 223 ~~~~~~~~-~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~d~~g 300 (591)
.+++..+. .|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++.. ..++..|
T Consensus 141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~ 219 (236)
T 1ikn_D 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 219 (236)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccch
Confidence 56677776 9999999999999999999999999998 6779999999999999999999999999998633 4778889
Q ss_pred CcHHHHHHHC
Q 007755 301 NTALHVATRK 310 (591)
Q Consensus 301 ~T~Lh~A~~~ 310 (591)
.|+.+.+...
T Consensus 220 ~~~~~~~~~~ 229 (236)
T 1ikn_D 220 EESYDTESEF 229 (236)
T ss_dssp TTCCCCC---
T ss_pred HHHHhhhccc
Confidence 8887766543
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1e-32 Score=266.67 Aligned_cols=192 Identities=24% Similarity=0.369 Sum_probs=145.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCc----ccCCCCCCCHHH
Q 007755 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLS----QTTGPSNATPLV 203 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~----~~~~~~g~tpL~ 203 (591)
.|+||||+|+..|+.+++++|++.. +.+++..|..|+||||+|+..|+.+++++|+++++++. ...|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 4899999999999999999999861 24467788999999999999999999999999988753 345667889999
Q ss_pred HHHHcCCHHHHHHHHhccCCcceecCC-------------CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHH
Q 007755 204 SAATRGHTAVVNELLSKDGGLLEISRS-------------NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTAL 270 (591)
Q Consensus 204 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L 270 (591)
+|+..|+.+++++|++++ .+++..+. +|.||||+|+..|+.+++++|+++|+++ +..|..|+|||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L 158 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI-RAQDSLGNTVL 158 (232)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 999999999999998874 44444433 5777777777777777777777777766 55567777777
Q ss_pred HHHHhCCCHHHH----HHHHHcCcccc-----cCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 271 HMAVKGQSCEVV----KLLLEADAAIV-----MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 271 h~A~~~g~~~~v----~~Ll~~~~~~~-----~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
|+|+..|+.+++ ++|+++|++.. +.+|..|+||||+|++.|+.+++++|+++
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 777777777666 66777666532 46666777777777777777777777763
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.2e-32 Score=264.36 Aligned_cols=197 Identities=25% Similarity=0.263 Sum_probs=176.9
Q ss_pred CCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 007755 73 HNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYS 152 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~ 152 (591)
.|.||||.|++.|+.++++.|++.. +..++.+|..|.||||+|+..|+.+++++|++++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~---------------------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 60 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE---------------------GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAA 60 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT---------------------CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc---------------------CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4789999999999999999999852 5568889999999999999999999999999987
Q ss_pred CCcC---CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccC------------CCCCCCHHHHHHHcCCHHHHHHH
Q 007755 153 TKEG---LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTT------------GPSNATPLVSAATRGHTAVVNEL 217 (591)
Q Consensus 153 ~~~~---~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~------------~~~g~tpL~~A~~~g~~~~v~~L 217 (591)
++.. ....|..|.||||+|+..|+.+++++|+++|+++.... +..|.||||+|+..|+.+++++|
T Consensus 61 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 140 (232)
T 2rfa_A 61 PELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140 (232)
T ss_dssp GGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH
T ss_pred chhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 6532 25567789999999999999999999999999874432 23799999999999999999999
Q ss_pred HhccCCcceecCCCCCcHHHHHHHcCCHHHH----HHHHhcCcccc-----cccCCCCCcHHHHHHhCCCHHHHHHHHHc
Q 007755 218 LSKDGGLLEISRSNGKNALHFAARQGHVDVV----KALLSKDPQLA-----RRTDKKGQTALHMAVKGQSCEVVKLLLEA 288 (591)
Q Consensus 218 l~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v----~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~ 288 (591)
+++ +.+++..|.+|.||||+|+..|+.+++ ++|++.|++.. +..|..|+||||+|+..|+.+++++|+++
T Consensus 141 l~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 141 IEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp HHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 998 667888999999999999999999988 99999998764 57799999999999999999999999999
Q ss_pred Ccc
Q 007755 289 DAA 291 (591)
Q Consensus 289 ~~~ 291 (591)
|+.
T Consensus 220 g~~ 222 (232)
T 2rfa_A 220 RKH 222 (232)
T ss_dssp HHH
T ss_pred Ccc
Confidence 876
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-33 Score=279.07 Aligned_cols=271 Identities=18% Similarity=0.194 Sum_probs=218.5
Q ss_pred HHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCc
Q 007755 79 HLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLT 158 (591)
Q Consensus 79 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~ 158 (591)
+.+++.|..+.++.++........... .......+..|.||||.||..|+.++|++|+++|.+ ++
T Consensus 3 ~~~a~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~ 67 (299)
T 1s70_B 3 MADAKQKRNEQLKRWIGSETDLEPPVV-------------KRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD--IN 67 (299)
T ss_dssp SHHHHHHHHHHHHHHHHTTTSSCCSCC-------------CCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC--TT
T ss_pred hhHHHHHHHHHHHHHHccccccccccc-------------cCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC--Cc
Confidence 357788888888888875332111000 111233456788999999999999999999998755 57
Q ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHH
Q 007755 159 RKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHF 238 (591)
Q Consensus 159 ~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~ 238 (591)
..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHH
Confidence 78889999999999999999999999999998 66788999999999999999999999998 56677889999999999
Q ss_pred HHHcCCHHHHHHHHhc-CcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHH
Q 007755 239 AARQGHVDVVKALLSK-DPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVT 317 (591)
Q Consensus 239 A~~~g~~~~v~~Ll~~-~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~ 317 (591)
|+..++.++++.++.. +.++ +..+..+.++++ ..+..++..+.......+..|.||||+|+..|+.++++
T Consensus 146 A~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 216 (299)
T 1s70_B 146 AEEEAMEELLQNEVNRQGVDI-EAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216 (299)
T ss_dssp CCSHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred HHhcchHHHHHHHHhhcCCCc-hhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHH
Confidence 9999999999988875 3333 332333333333 34556666666656677889999999999999999999
Q ss_pred HHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccccccCCchHHhhhhhh
Q 007755 318 ELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRANELNQPRDELRKTVT 380 (591)
Q Consensus 318 ~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~~~~~~~~~l~~~~~ 380 (591)
+|++ .|++++.+|..|+||||+|+..+ +.+++++|++.|++...........+..+.+
T Consensus 217 ~Ll~-~g~d~~~~d~~g~tpL~~A~~~~----~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 217 LLIQ-ARYDVNIKDYDGWTPLHAAAHWG----KEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHHT-TTCCTTCCCTTCCCHHHHHHHTT----CHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred HHHH-cCCCCCCcCCCCCcHHHHHHhcC----CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 9999 59999999999999999999999 8999999999999876665555555554443
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=7.1e-32 Score=254.60 Aligned_cols=193 Identities=30% Similarity=0.368 Sum_probs=175.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..+.||||.|+..|+.+.++.|++.+. .+++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 4568999999999999999999999754 356778889999999999999999999999999997 56788899999999
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCcHHHHHHhCCC-----H
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKD-PQLARRTDKKGQTALHMAVKGQS-----C 279 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~-~~~~~~~d~~g~t~Lh~A~~~g~-----~ 279 (591)
+..|+.+++++|++..+..++..+..|.||||+|+..|+.+++++|++++ .++ +..|..|+||||+|+..++ .
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDI-DFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCT-TCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-CCCCCCCCCHHHHHHHhccchhhHH
Confidence 99999999999998878888888999999999999999999999999999 555 7779999999999999888 8
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
+++++|+++|++ ++.+|..|+||||+|++.|+.+++++|+++
T Consensus 159 ~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 159 DIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 999999999988 788999999999999999999999999984
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=9.2e-32 Score=253.81 Aligned_cols=194 Identities=26% Similarity=0.309 Sum_probs=177.6
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007755 72 RHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKY 151 (591)
Q Consensus 72 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~ 151 (591)
..+.||||.|+..|+.+.++.|+... +..++..|..|.||||+|+..|+.+++++|+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~---------------------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 61 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDT---------------------TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCT---------------------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcC---------------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 46779999999999999999999863 346888999999999999999999999999998
Q ss_pred CCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCC
Q 007755 152 STKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSN 231 (591)
Q Consensus 152 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 231 (591)
|++ ++..+..|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|+++++.+++..|..
T Consensus 62 g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 62 GAD--INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp TCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred CCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 765 567888999999999999999999999965554447788899999999999999999999999976888999999
Q ss_pred CCcHHHHHHHcCC-----HHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q 007755 232 GKNALHFAARQGH-----VDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 232 g~tpLh~A~~~g~-----~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 289 (591)
|.||||+|+..++ .+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999998 99999999999998 777999999999999999999999999876
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=5.3e-33 Score=275.88 Aligned_cols=217 Identities=19% Similarity=0.253 Sum_probs=153.6
Q ss_pred hccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--cCCc----cCCCCCCcHHHHHHHh---CcHHHHHHHHhCCCC
Q 007755 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTK--EGLT----RKNRSGFDPLHIAAVQ---GHHAIVQVLLDHDPS 189 (591)
Q Consensus 119 ~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~--~~~~----~~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~ 189 (591)
++..+..|..|.||||.|+..|+.++|+.|++.+.. .++. ..+..|+||||+|+.. |+.+++++|+++|++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARK 82 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcc
Confidence 344567899999999999999999999999985422 1222 3578899999999987 999999999998764
Q ss_pred Cc----------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCC--------------CCCcHHHHHHHcCCH
Q 007755 190 LS----------QTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRS--------------NGKNALHFAARQGHV 245 (591)
Q Consensus 190 ~~----------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g~tpLh~A~~~g~~ 245 (591)
.. ...|..|.||||+|+..|+.+++++|+++ +.+++..+. .|.||||+|+..|+.
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 31 12456788888888888888888888887 455555555 688888888888888
Q ss_pred HHHHHHHh---cCcccccccCCCCCcHHHHHHhCCC---------HHHHHHHHHcCcccc------cCCCCCCCcHHHHH
Q 007755 246 DVVKALLS---KDPQLARRTDKKGQTALHMAVKGQS---------CEVVKLLLEADAAIV------MLPDKFGNTALHVA 307 (591)
Q Consensus 246 ~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~~g~---------~~~v~~Ll~~~~~~~------~~~d~~g~T~Lh~A 307 (591)
+++++|++ .|+++ +.+|..|+||||+|+..|+ .+++++|+++|+++. +.+|..|+||||+|
T Consensus 162 ~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp HHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 88888888 77777 5667888888888887777 678888888877632 35778888888888
Q ss_pred HHCCcHHHHHHHhcCCCC-CcccccCCCCCHH
Q 007755 308 TRKKRTEIVTELLSLPDT-NVNALTRDHKTAL 338 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~~~g~-~~~~~d~~G~t~L 338 (591)
+..|+.+++++|+++ |+ |+......+.+|-
T Consensus 241 ~~~g~~~iv~~Ll~~-ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 241 ASSGKIGVLAYILQR-EIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHTTCHHHHHHHHHH-HTC-------------
T ss_pred HHhChHHHHHHHHHC-CCCCchhhhhhhhhcc
Confidence 888888888888884 55 6766666665553
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=4e-32 Score=269.52 Aligned_cols=218 Identities=19% Similarity=0.227 Sum_probs=173.5
Q ss_pred hccCCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhcccc----ccCCCCCcHHHHHHHc---C
Q 007755 68 QVTGRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVN----EVNELGETALFTAADK---G 140 (591)
Q Consensus 68 ~~~~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~TpL~~Aa~~---g 140 (591)
+..+..|.||||.|++.|+.++|+.|++.... .+..++ ..|..|.||||+|+.. |
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------------------~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g 68 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQR------------------SKKRLTDSEFKDPETGKTCLLKAMLNLHNG 68 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHH------------------SCCCTTSGGGSCTTTCCCHHHHHHHSCBTT
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhh------------------cccccCCcccccCcCCCCHHHHHHHHHhcC
Confidence 34678899999999999999999999863110 022232 4588999999999987 9
Q ss_pred CHHHHHHHHhcCCCc---------CCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCC--------------C
Q 007755 141 HIEVVNELLKYSTKE---------GLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGP--------------S 197 (591)
Q Consensus 141 ~~~~v~~Ll~~~~~~---------~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~--------------~ 197 (591)
+.++|++|+++|+.. .....|..|.||||+|+..|+.+++++|+++|+++.. .+. .
T Consensus 69 ~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~ 147 (273)
T 2pnn_A 69 QNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYF 147 (273)
T ss_dssp BCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCS
T ss_pred ChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccC
Confidence 999999999987542 1233567899999999999999999999999999844 443 7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhc--cCCcceecCCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------c
Q 007755 198 NATPLVSAATRGHTAVVNELLSK--DGGLLEISRSNGKNALHFAARQGH---------VDVVKALLSKDPQLA------R 260 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~tpLh~A~~~g~---------~~~v~~Ll~~~~~~~------~ 260 (591)
|.||||+|+..|+.+++++|++. .+.+++..|.+|.||||+|+..|+ .+++++|+++|+++. +
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~ 227 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEE 227 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccccc
Confidence 99999999999999999999994 477788999999999999999998 899999999999884 3
Q ss_pred ccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHH
Q 007755 261 RTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTAL 304 (591)
Q Consensus 261 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~L 304 (591)
..|..|+||||+|++.|+.+++++|+++|+.........+.+|-
T Consensus 228 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 228 ITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred ccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 57999999999999999999999999999865666666666553
No 48
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.6e-32 Score=264.07 Aligned_cols=205 Identities=24% Similarity=0.279 Sum_probs=142.0
Q ss_pred CCChHHHHHHHcCCHHHHH----HHHcCCCcccccccCCCcchhHHHHhhhccccc----cCCCCCcHHHHHHHc---CC
Q 007755 73 HNDTELHLAAQRGDLGAVK----QILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE----VNELGETALFTAADK---GH 141 (591)
Q Consensus 73 ~g~t~Lh~Aa~~g~~~~v~----~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~TpL~~Aa~~---g~ 141 (591)
.|.||||.|++.|+.+.++ +|++. +..++. .|..|.||||+|+.. |+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~----------------------g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~ 58 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN----------------------SKYLTDSAYTEGSTGKTCLMKAVLNLQDGV 58 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH----------------------TCCTTSGGGSBTTTTBCHHHHHHHTCBTTB
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc----------------------CCCcccccccCCCCCCCHHHHHHHccccch
Confidence 3779999999999998554 44443 556776 899999999999999 99
Q ss_pred HHHHHHHHhcCCCcCC---------ccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Q 007755 142 IEVVNELLKYSTKEGL---------TRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTA 212 (591)
Q Consensus 142 ~~~v~~Ll~~~~~~~~---------~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 212 (591)
.++|++|++++++.+. ...|..|.||||+|+..|+.+++++|+++|+++. ..+..+.+
T Consensus 59 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~------------ 125 (256)
T 2etb_A 59 NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH-LRACGRFF------------ 125 (256)
T ss_dssp CTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCSGGG------------
T ss_pred HHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccccccc------------
Confidence 9999999998765431 1245679999999999999999999999998874 34433210
Q ss_pred HHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHh---cCcccccccCCCCCcHHHHHHh--CCCHH-------
Q 007755 213 VVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLS---KDPQLARRTDKKGQTALHMAVK--GQSCE------- 280 (591)
Q Consensus 213 ~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~g~t~Lh~A~~--~g~~~------- 280 (591)
.......+..|.||||+|+..|+.+++++|++ .|+++ +..|..|+||||+|+. .++.+
T Consensus 126 ---------~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 195 (256)
T 2etb_A 126 ---------QKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIH 195 (256)
T ss_dssp ---------SCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred ---------cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHH
Confidence 01112223346666666666666666666666 56655 4456666666666665 55555
Q ss_pred HHHHHHHcCcccc------cCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 281 VVKLLLEADAAIV------MLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 281 ~v~~Ll~~~~~~~------~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
++++|+++|+++. +.+|..|+||||+|+..|+.+++++|+++
T Consensus 196 iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 196 MYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp HHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 6666666666521 56666666666666666666666666663
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2e-31 Score=261.76 Aligned_cols=205 Identities=24% Similarity=0.277 Sum_probs=161.5
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHhcCCCcCCcc----CCCCCCcHHHHHHHh---CcHHHHHHHHhCCCCCcccCCC
Q 007755 128 LGETALFTAADKGHIE----VVNELLKYSTKEGLTR----KNRSGFDPLHIAAVQ---GHHAIVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~----~v~~Ll~~~~~~~~~~----~~~~g~t~Lh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~ 196 (591)
.|+||||.|+..|+.+ ++++|++.+.+ ++. .|..|+||||+|+.. |+.+++++|+++|++.....
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~--i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-- 76 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY--LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK-- 76 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC--TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS--
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC--cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh--
Confidence 3778888888888886 55666666544 444 677888888888888 88888888888776653211
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCC-----------
Q 007755 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKK----------- 265 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~----------- 265 (591)
.++.. .....|..|.||||+|+..|+.+++++|+++|+++ +..|..
T Consensus 77 -------------------~~~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 133 (256)
T 2etb_A 77 -------------------PLVNA---QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCF 133 (256)
T ss_dssp -------------------CGGGC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCC
T ss_pred -------------------hhccc---ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccccccccccccccc
Confidence 00110 11123456777777777777777777777777776 444443
Q ss_pred --CCcHHHHHHhCCCHHHHHHHHH---cCcccccCCCCCCCcHHHHHHH--CCcHH-------HHHHHhcCCCCCc----
Q 007755 266 --GQTALHMAVKGQSCEVVKLLLE---ADAAIVMLPDKFGNTALHVATR--KKRTE-------IVTELLSLPDTNV---- 327 (591)
Q Consensus 266 --g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~g~T~Lh~A~~--~g~~~-------iv~~Ll~~~g~~~---- 327 (591)
|+||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+. .++.+ ++++|++. |+++
T Consensus 134 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~ 211 (256)
T 2etb_A 134 YFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTV 211 (256)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCccccc
Confidence 9999999999999999999999 8888 89999999999999999 88888 99999994 9999
Q ss_pred ---ccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCcccc
Q 007755 328 ---NALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRA 365 (591)
Q Consensus 328 ---~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~ 365 (591)
+.+|..|+||||+|+..+ +.+++++|+++|+...
T Consensus 212 ~~~~~~d~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 212 QLEEISNHQGLTPLKLAAKEG----KIEIFRHILQREFSGA 248 (256)
T ss_dssp CGGGCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCCHHHHHHHhC----CHHHHHHHHhCCCCCC
Confidence 999999999999999999 8999999999998754
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=2.7e-31 Score=261.36 Aligned_cols=201 Identities=20% Similarity=0.222 Sum_probs=130.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhcccccc----CCCCCcHHHHHH---HcCCHH
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEV----NELGETALFTAA---DKGHIE 143 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~TpL~~Aa---~~g~~~ 143 (591)
+..|.++||.|++.|+.+.++.|++... ..+..++.. |..|.||||+|+ ..|+.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~------------------~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~ 63 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLL------------------THKKRLTDEEFREPSTGKTCLPKALLNLSAGRND 63 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHH------------------HHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHH------------------hcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHH
Confidence 4568899999999999997777765100 013344444 377999999999 779999
Q ss_pred HHHHHHhcCCC---------cCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCC--------------CCCCC
Q 007755 144 VVNELLKYSTK---------EGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTG--------------PSNAT 200 (591)
Q Consensus 144 ~v~~Ll~~~~~---------~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~--------------~~g~t 200 (591)
+|++|++.++. ......|..|+||||+|+..|+.+++++|+++|+++. ..+ ..|.|
T Consensus 64 ~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~~~~~~~~~~~~~~g~t 142 (260)
T 3jxi_A 64 TIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-AQARGRFFQPKDEGGYFYFGEL 142 (260)
T ss_dssp HHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCEECCCSSSCCCCSCCSCSS
T ss_pred HHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-ccccccccCcccccccccCCCC
Confidence 99999998753 2345556689999999999999999999999998874 333 34555
Q ss_pred HHHHHHHcCCHHHHHHHHhc--cCCcceecCCCCCcHHHHHHHcCC---------HHHHHHHHhcCcccc------cccC
Q 007755 201 PLVSAATRGHTAVVNELLSK--DGGLLEISRSNGKNALHFAARQGH---------VDVVKALLSKDPQLA------RRTD 263 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~tpLh~A~~~g~---------~~~v~~Ll~~~~~~~------~~~d 263 (591)
|||+|+..|+.+++++|++. .+.+++..|..|.||||+|+..|+ .+++++|+++|+++. +..|
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLN 222 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhccc
Confidence 55555555555555555552 244445555555555555555444 455555555554442 2344
Q ss_pred CCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007755 264 KKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 264 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 290 (591)
..|+||||+|++.|+.+++++|+++|+
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 555555555555555555555555443
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=6.1e-30 Score=234.24 Aligned_cols=157 Identities=35% Similarity=0.473 Sum_probs=79.4
Q ss_pred HHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHH
Q 007755 167 PLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVD 246 (591)
Q Consensus 167 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~ 246 (591)
+|+.||..|+.++|+.|+++|+++ +..|..|.||||+|+..++.+++++|+++ +.+++..|.+|.||||+|+..|+.+
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHH
Confidence 344444444444444444444443 33344444444444444444444444443 2333444555555555555555555
Q ss_pred HHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCC
Q 007755 247 VVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTN 326 (591)
Q Consensus 247 ~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~ 326 (591)
++++|+++|+++ +.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++.|+.+++++|++ .|++
T Consensus 85 ~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA~ 161 (169)
T 4gpm_A 85 VVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEK-QGGW 161 (169)
T ss_dssp HHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT-C---
T ss_pred HHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCC
Confidence 555555555555 44455556666666666666666666665555 55555566666666666666666666655 3555
Q ss_pred cc
Q 007755 327 VN 328 (591)
Q Consensus 327 ~~ 328 (591)
++
T Consensus 162 ie 163 (169)
T 4gpm_A 162 LE 163 (169)
T ss_dssp --
T ss_pred cC
Confidence 44
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.6e-29 Score=231.40 Aligned_cols=157 Identities=34% Similarity=0.548 Sum_probs=144.8
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC
Q 007755 131 TALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGH 210 (591)
Q Consensus 131 TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 210 (591)
++|+.||+.|+.++|++||++|++ ++.+|..|+||||+|+..++.+++++|+++|+++ +..|..|.||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad--vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 479999999999999999998765 5778999999999999999999999999999998 6788899999999999999
Q ss_pred HHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCc
Q 007755 211 TAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADA 290 (591)
Q Consensus 211 ~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~ 290 (591)
.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|+++|+++ +.+|.+|+||||+|++.|+.+++++|+++|+
T Consensus 83 ~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 83 KEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999998 5678889999999999999999999999999999998 6779999999999999999999999999999
Q ss_pred cc
Q 007755 291 AI 292 (591)
Q Consensus 291 ~~ 292 (591)
++
T Consensus 161 ~i 162 (169)
T 4gpm_A 161 WL 162 (169)
T ss_dssp --
T ss_pred Cc
Confidence 84
No 53
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.5e-31 Score=269.91 Aligned_cols=256 Identities=14% Similarity=0.057 Sum_probs=197.8
Q ss_pred ChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007755 75 DTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYSTK 154 (591)
Q Consensus 75 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~ 154 (591)
.+|+| ....+++++|++. ++.++..|..|.|+++ |+.++|++|+++|.+
T Consensus 24 ~~~~~----~~~~dlv~~ll~~----------------------ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~ 72 (327)
T 1sw6_A 24 AGPII----TFTHDLTSDFLSS----------------------PLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLF 72 (327)
T ss_dssp -CCEE----ECCTTCCCSTTTS----------------------SCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC
T ss_pred ccchh----hhcCchHHHHhhC----------------------CcccccCCCCCCcccC-----chhHHHHHHHHhccC
Confidence 35555 2445668888876 7789999999999987 999999999998865
Q ss_pred cCCcc---------------CCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHh
Q 007755 155 EGLTR---------------KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLS 219 (591)
Q Consensus 155 ~~~~~---------------~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 219 (591)
++... ......+.+|+|+..+..+++++|++.|.+++...|..|.||||+|+..|+.+++++|++
T Consensus 73 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~ 152 (327)
T 1sw6_A 73 PEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK 152 (327)
T ss_dssp -------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 43210 111122345889999999999999999999855489999999999999999999999999
Q ss_pred ccCCcceecCCCCCcHHHHHHHcCC---HHHHHHHHhcCcccccccCCCCCcHHHHHHh----CCCHHHHHHHHHc----
Q 007755 220 KDGGLLEISRSNGKNALHFAARQGH---VDVVKALLSKDPQLARRTDKKGQTALHMAVK----GQSCEVVKLLLEA---- 288 (591)
Q Consensus 220 ~~~~~~~~~~~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~----~g~~~~v~~Ll~~---- 288 (591)
+ +.+++..|.+|.||||+|+..|+ .++++.|++.+....+..|..|+||||+|+. .|+.+++++|++.
T Consensus 153 ~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~ 231 (327)
T 1sw6_A 153 H-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 231 (327)
T ss_dssp T-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHH
T ss_pred c-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 8 56788899999999999999998 7888888888743347789999999999999 9999999999987
Q ss_pred ----------------CcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHH
Q 007755 289 ----------------DAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASE 352 (591)
Q Consensus 289 ----------------~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~ 352 (591)
+++ ++.+|..|.||||.|+. +++|++. +++.+|..|+||||+|+..+ +.+
T Consensus 232 ~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g----~~~ 297 (327)
T 1sw6_A 232 IVKKQNRPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLG----NIS 297 (327)
T ss_dssp HHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHC----CHH
T ss_pred HhcccchHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcC----CHH
Confidence 555 78889999999999996 8888885 69999999999999999999 899
Q ss_pred HHHHHHhcCcccccccCCchHHhh
Q 007755 353 IKDCLARCGAVRANELNQPRDELR 376 (591)
Q Consensus 353 i~~~L~~~ga~~~~~~~~~~~~l~ 376 (591)
++++|+++|++...........+.
T Consensus 298 ~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 298 IVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred HHHHHHHcCCCCcccCCCCCCHHH
Confidence 999999999987665554444443
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.2e-30 Score=253.75 Aligned_cols=208 Identities=21% Similarity=0.224 Sum_probs=125.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHh----cCCCcCCcc--CCCCCCcHHHHHH---HhCcHHHHHHHHhCCCCCcccCCC
Q 007755 126 NELGETALFTAADKGHIEVVNELLK----YSTKEGLTR--KNRSGFDPLHIAA---VQGHHAIVQVLLDHDPSLSQTTGP 196 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~----~~~~~~~~~--~~~~g~t~Lh~A~---~~g~~~iv~~Ll~~~~~~~~~~~~ 196 (591)
|..|+|+||.|++.|+.+.++.|++ .+...+... .+..|.||||+|+ ..|+.+++++|++.+++....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~--- 78 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM--- 78 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch---
Confidence 5678899999999999995555444 665533221 2367999999998 679999999999887543110
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccC-------------
Q 007755 197 SNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTD------------- 263 (591)
Q Consensus 197 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d------------- 263 (591)
..++ .......|..|.||||+|+..|+.+++++|+++|+++ +..|
T Consensus 79 ------------------~~~~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 136 (260)
T 3jxi_A 79 ------------------REFI---NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGY 136 (260)
T ss_dssp ------------------HHHH---TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCS
T ss_pred ------------------Hhhh---cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCccccccc
Confidence 0011 1112223345555555555555555555555555554 2333
Q ss_pred -CCCCcHHHHHHhCCCHHHHHHHHH---cCcccccCCCCCCCcHHHHHHHCCc---------HHHHHHHhcCCCCCc---
Q 007755 264 -KKGQTALHMAVKGQSCEVVKLLLE---ADAAIVMLPDKFGNTALHVATRKKR---------TEIVTELLSLPDTNV--- 327 (591)
Q Consensus 264 -~~g~t~Lh~A~~~g~~~~v~~Ll~---~~~~~~~~~d~~g~T~Lh~A~~~g~---------~~iv~~Ll~~~g~~~--- 327 (591)
..|+||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..++ .+++++|++ .|+++
T Consensus 137 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~ 214 (260)
T 3jxi_A 137 FYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPD 214 (260)
T ss_dssp CCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTT
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccc
Confidence 356666666666666666666666 5555 55566666666666665554 456666665 35555
Q ss_pred ----ccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007755 328 ----NALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 328 ----~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
+.+|..|+||||+|+..+ +.+++++|+++|+..
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g----~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTG----KIGIFQHIIRREIAD 251 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCCCHHHHHHHcC----CHHHHHHHHHhCCCc
Confidence 456666666666666666 566666666666543
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3.8e-30 Score=255.74 Aligned_cols=193 Identities=25% Similarity=0.319 Sum_probs=164.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHH--
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAA-- 206 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~-- 206 (591)
+.+++|.|+..|+.+.++.|++.+.+..++..|..|+||||+|+..|+.+++++|++.|+...+..+..|.||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 467889999999999999998876665577889999999999999999999999999998444778888999999999
Q ss_pred ---HcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHH
Q 007755 207 ---TRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVK 283 (591)
Q Consensus 207 ---~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~ 283 (591)
..++.+++++|++.+ ...+..+..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLG-NINAKASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCSHHHHHHHHHHHHHS-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHH
Confidence 667888999888884 556667788899999999999999999999998887 667888999999999999999999
Q ss_pred HHHH-cCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCC
Q 007755 284 LLLE-ADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPD 324 (591)
Q Consensus 284 ~Ll~-~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g 324 (591)
+|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++.+
T Consensus 234 ~Ll~~~gad-~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 234 LLLAVPSCD-ISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHTSTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCCCC-CcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9998 6776 78888889999999999999999998887644
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=246.73 Aligned_cols=192 Identities=26% Similarity=0.282 Sum_probs=176.4
Q ss_pred CcHHHHHHHhCcHHHHHHHHhCCCC-CcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHH---
Q 007755 165 FDPLHIAAVQGHHAIVQVLLDHDPS-LSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAA--- 240 (591)
Q Consensus 165 ~t~Lh~A~~~g~~~iv~~Ll~~~~~-~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~--- 240 (591)
++++|.|+..|+.+.++.+++.+.+ ..+..|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 4688999999999999999887554 135678899999999999999999999999977688899999999999999
Q ss_pred --HcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHH
Q 007755 241 --RQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTE 318 (591)
Q Consensus 241 --~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~ 318 (591)
..++.+++++|++.|... +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.+++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 668999999999999776 66788999999999999999999999999998 89999999999999999999999999
Q ss_pred HhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCc
Q 007755 319 LLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 319 Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|++..|++++.+|..|+||||+|+..+ +.+++++|++.+.
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g----~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAG----QSEIASMLYSRMN 274 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHT----CHHHHHHHHHHCC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcC----CHHHHHHHHhccC
Confidence 999679999999999999999999999 8999999987653
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=5.4e-28 Score=226.47 Aligned_cols=166 Identities=25% Similarity=0.268 Sum_probs=132.1
Q ss_pred hccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007755 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
..+++.+|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..|..|
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 101 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK--LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSG 101 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTS
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc--cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence 455788899999999999999999999999997654 5667888999999999999999999999988886 5567777
Q ss_pred CCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC
Q 007755 199 ATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS 278 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 278 (591)
.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIFGR 179 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhCc
Confidence 8888888888888888888876 4556667777777777777777777777777777776 5567777777777777777
Q ss_pred HHHHHHHHHcC
Q 007755 279 CEVVKLLLEAD 289 (591)
Q Consensus 279 ~~~v~~Ll~~~ 289 (591)
.+++++|++++
T Consensus 180 ~~~v~~Ll~~~ 190 (192)
T 2rfm_A 180 QEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 77777777654
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.3e-28 Score=224.61 Aligned_cols=169 Identities=22% Similarity=0.286 Sum_probs=82.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Q 007755 130 ETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRG 209 (591)
Q Consensus 130 ~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 209 (591)
.||||.|+..|+.+++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------- 62 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP------------------- 62 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-------------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-------------------
Confidence 4555555555555555555554322 23444555555555555555555555555555544
Q ss_pred CHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q 007755 210 HTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 210 ~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 289 (591)
+..+..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|
T Consensus 63 ----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 125 (172)
T 3v30_A 63 ----------------HILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLARG 125 (172)
T ss_dssp ----------------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ----------------hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 333444444555555555555555555554444 334455555555555555555555555555
Q ss_pred cccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCH
Q 007755 290 AAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTA 337 (591)
Q Consensus 290 ~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~ 337 (591)
++ ++.+|..|+||||+|+..|+.+++++|+++ ++++...|..|.||
T Consensus 126 a~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 126 AD-LTTEADSGYTPMDLAVALGYRKVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHHHSCC-------
T ss_pred CC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHH-HHHHhcccCCCCCC
Confidence 44 444555555555555555555555555552 44444444444444
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1e-27 Score=220.26 Aligned_cols=147 Identities=24% Similarity=0.304 Sum_probs=117.6
Q ss_pred hhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCC
Q 007755 118 RSSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPS 197 (591)
Q Consensus 118 ~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 197 (591)
....++..|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++++++ +..|..
T Consensus 25 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 101 (172)
T 3v30_A 25 GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD--PHILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWN 101 (172)
T ss_dssp CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTT
T ss_pred CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCC
Confidence 3445888999999999999999999999999998755 5678889999999999999999999999999887 566777
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcH
Q 007755 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTA 269 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 269 (591)
|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++++++. ...+..|.||
T Consensus 102 g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~-~~~~~~~~~p 171 (172)
T 3v30_A 102 GGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL-FQSNLVPADP 171 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH-SCC-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH-hcccCCCCCC
Confidence 88888888888888888888877 4556677777888888888888888888888887776 3445556554
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.5e-30 Score=268.39 Aligned_cols=238 Identities=21% Similarity=0.197 Sum_probs=158.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+.++.||||.||+.|+.+++++|++...+ ....+..|..|.||||+||..|+.++|++|++
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~-------------------~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~ 149 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTS-------------------DEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 149 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--C-------------------CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCc-------------------HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 45566999999999999999999876321 11123345567789999999999999999998
Q ss_pred cCCCcC-CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcc-cCCCCCCCHHHHHH-HcCCHHHHHHHHhccCCccee
Q 007755 151 YSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQ-TTGPSNATPLVSAA-TRGHTAVVNELLSKDGGLLEI 227 (591)
Q Consensus 151 ~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~-~~~~~g~tpL~~A~-~~g~~~~v~~Ll~~~~~~~~~ 227 (591)
+|++.. .+..+.+ .||||+|+..|+.+++++|+++|+++.. ..|..|.||||+|+ ..|+.+++++|++++.
T Consensus 150 ~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga----- 223 (376)
T 2aja_A 150 LAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV----- 223 (376)
T ss_dssp SCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----
T ss_pred CCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----
Confidence 875311 1112222 7899999999999999999999887632 25666889999999 9999999999987531
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHH---------------------------
Q 007755 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCE--------------------------- 280 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~--------------------------- 280 (591)
.|.||||.|+..|+.+++++|+++|+++. ..| ++++.|+.+|+.+
T Consensus 224 ---~~~taL~~Aa~~g~~evv~lL~~~ga~~~-~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~ 295 (376)
T 2aja_A 224 ---MLAYAEIHEFEYGEKYVNPFIARHVNRLK-EMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLD 295 (376)
T ss_dssp ---HHHHHHHCTTTTTTTTHHHHHHHHHHHHH-HHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHH
T ss_pred ---ccchHHHHHHHCCCHHHHHHHHhcCcccc-ccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHH
Confidence 37889999999999999999998887763 222 2444455444433
Q ss_pred HHHHHHHcCcc--c--ccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCC
Q 007755 281 VVKLLLEADAA--I--VMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 281 ~v~~Ll~~~~~--~--~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~ 345 (591)
.+++|++.+.. . .....+.++||||+|++.|+.+++++|++. ...++..|+|++++|...+
T Consensus 296 ~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~----~~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 296 DIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI----PSVLALTKANNYYINETGG 360 (376)
T ss_dssp HHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS----HHHHHSCC-----------
T ss_pred HHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcC----hHHHHHHHHhccccccccc
Confidence 34444432210 0 112334577889999999999999998874 3677888888888888777
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.5e-27 Score=223.44 Aligned_cols=161 Identities=24% Similarity=0.297 Sum_probs=131.6
Q ss_pred ccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHH
Q 007755 158 TRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALH 237 (591)
Q Consensus 158 ~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 237 (591)
+.+|..|+||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKTPLM 106 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHH
Confidence 456778889999999999999999999888876 55677788888888888888888888887 4556677788888888
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHH
Q 007755 238 FAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVT 317 (591)
Q Consensus 238 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~ 317 (591)
+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 888888888888888888877 56678888888888888888888888888877 6777888888888888888888888
Q ss_pred HHhcC
Q 007755 318 ELLSL 322 (591)
Q Consensus 318 ~Ll~~ 322 (591)
+|++.
T Consensus 185 ~Ll~~ 189 (192)
T 2rfm_A 185 IFTEV 189 (192)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88763
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.1e-27 Score=215.72 Aligned_cols=156 Identities=26% Similarity=0.346 Sum_probs=77.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Q 007755 130 ETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRG 209 (591)
Q Consensus 130 ~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 209 (591)
.||||.|+..|+.+++++|++++.+ ++..+..|+||||+|+. |+.+++++|+++|+++ +..+..|.||||+|+..|
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVN--VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCC--TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCC--ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 3445555555555555555443322 23344444455555444 4555555555544444 333444445555555555
Q ss_pred CHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q 007755 210 HTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 210 ~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 289 (591)
+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++++++..+..|..|+||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 82 FLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 55555555544 23344445555555555555555555555555555533444555555555555555555555555555
Q ss_pred c
Q 007755 290 A 290 (591)
Q Consensus 290 ~ 290 (591)
+
T Consensus 161 A 161 (162)
T 1ihb_A 161 A 161 (162)
T ss_dssp -
T ss_pred C
Confidence 4
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.3e-27 Score=215.52 Aligned_cols=159 Identities=25% Similarity=0.321 Sum_probs=142.6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHc
Q 007755 163 SGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQ 242 (591)
Q Consensus 163 ~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 242 (591)
...||||.|+..|+.+++++|+++++++ +..+..|.||||+|+. |+.+++++|+++ +.+++..+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHc
Confidence 3568999999999999999999999887 6678889999999999 999999999988 566778889999999999999
Q ss_pred CCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 243 GHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 243 g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++.++.+|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 9999999999999987 667899999999999999999999999999987788999999999999999999999999984
Q ss_pred CCCC
Q 007755 323 PDTN 326 (591)
Q Consensus 323 ~g~~ 326 (591)
|+|
T Consensus 160 -GAd 162 (162)
T 1ihb_A 160 -GAG 162 (162)
T ss_dssp -C--
T ss_pred -CCC
Confidence 654
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=4.6e-27 Score=214.83 Aligned_cols=159 Identities=23% Similarity=0.307 Sum_probs=120.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Q 007755 128 LGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAAT 207 (591)
Q Consensus 128 ~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 207 (591)
.|.||||.|+..|+.+++++|++.+.. ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV--INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 477888888888888888888887643 5667778888888888888888888888888776 4556677777777777
Q ss_pred cCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007755 208 RGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 208 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 287 (591)
.|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 79 KGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 7777777777776 4455666777777777777777777777777777776 5557777777777777777777777777
Q ss_pred cCcc
Q 007755 288 ADAA 291 (591)
Q Consensus 288 ~~~~ 291 (591)
++..
T Consensus 157 ~~~~ 160 (167)
T 3v31_A 157 HLLK 160 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.1e-26 Score=212.87 Aligned_cols=157 Identities=31% Similarity=0.488 Sum_probs=86.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
...+.|+||.|++.|+.++|++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~---- 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD--VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTP---- 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH----
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCH----
Confidence 34455666666666666666666665433 3445556666666666666666666666666554 3334444444
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 285 (591)
||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|
T Consensus 84 ------------------------------L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 84 ------------------------------LRLAALFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp ------------------------------HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------------------------HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 55555555555555555554444 33455555555555555555555555
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+++|++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 133 l~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 133 LKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 555554 44555555555555555555555555554
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.5e-26 Score=211.91 Aligned_cols=159 Identities=31% Similarity=0.404 Sum_probs=140.0
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 007755 195 GPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAV 274 (591)
Q Consensus 195 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 274 (591)
...+.+||+.|+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 34456777777777777777777776 4456667788999999999999999999999998887 667999999999999
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHH
Q 007755 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIK 354 (591)
Q Consensus 275 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~ 354 (591)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+..+ +.+++
T Consensus 89 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~----~~~~~ 162 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNG----NEDLA 162 (169)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhC----CHHHH
Confidence 99999999999999998 788999999999999999999999999995 9999999999999999999999 89999
Q ss_pred HHHHhcC
Q 007755 355 DCLARCG 361 (591)
Q Consensus 355 ~~L~~~g 361 (591)
++|.+.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 67
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=7.6e-27 Score=213.38 Aligned_cols=154 Identities=27% Similarity=0.344 Sum_probs=75.9
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcC
Q 007755 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQG 243 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 243 (591)
|.||||.|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 80 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKG 80 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHT
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcC
Confidence 445555555555555555555555443 33444455555555555555555555544 3333444444555555555555
Q ss_pred CHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 244 HVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 244 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+.+++++|+++++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 81 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 81 YTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp CHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 555555555544444 33344444555555544555555555544444 34444444455555554444444444444
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.6e-30 Score=246.13 Aligned_cols=193 Identities=17% Similarity=0.115 Sum_probs=110.2
Q ss_pred HHHHhcCCCcC-CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCc
Q 007755 146 NELLKYSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL 224 (591)
Q Consensus 146 ~~Ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 224 (591)
+.|++.+...+ .+..+..|.||||.|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|+++ +.+
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~ 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITA-GAN 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCC
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCC
Confidence 34444443332 2233334555555555555555555555555554 34455555566666655566666655555 344
Q ss_pred ceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHH--HhCCCHHHHHHHHHcCcccccCCCCCCCc
Q 007755 225 LEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMA--VKGQSCEVVKLLLEADAAIVMLPDKFGNT 302 (591)
Q Consensus 225 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A--~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T 302 (591)
++..|..|.||||+|+..|+.+++++|++.|+++....+..|+||||+| +..|+.+++++|+++|++ ++.+|..|.|
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~ 158 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS-MGLMNSGAVY 158 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH-TTTSGGGEEE
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC-cccccCCchH
Confidence 5555666666666666666666666666666666333335677777776 666777777777776666 5666666667
Q ss_pred HHHHHHHCCcHHHHHHHhcCCCCC--cccccCCCCCHHHHHhhCC
Q 007755 303 ALHVATRKKRTEIVTELLSLPDTN--VNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 303 ~Lh~A~~~g~~~iv~~Ll~~~g~~--~~~~d~~G~t~L~~A~~~~ 345 (591)
|+|.++..+.. ++|++ .|++ ++.+|..|+||||+|+..+
T Consensus 159 ~l~~~~~~~~~---~~ll~-~ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 159 ALWDYSAEFGD---ELSFR-EGESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp ESSCBCCSSTT---BCCBC-TTCEEEEEESSCTTCSSEEEEEETT
T ss_pred HHHHHhhcccc---ccCcc-ccccccccccCCCcccHHHHHHHcC
Confidence 76654444322 34455 3665 5666777777777777766
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=3.8e-27 Score=214.91 Aligned_cols=160 Identities=29% Similarity=0.343 Sum_probs=104.4
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 007755 195 GPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAV 274 (591)
Q Consensus 195 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 274 (591)
+..|.|||+.|+..|+.++++.|++..+......+..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHH
Confidence 3344555555555555555555555444444555556666666666666667777776666665 455666777777777
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHH
Q 007755 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIK 354 (591)
Q Consensus 275 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~ 354 (591)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|.. + +.+++
T Consensus 84 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~----~~~i~ 156 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-G----DTDIQ 156 (165)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-T----CHHHH
T ss_pred HcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-C----ChHHH
Confidence 77777777777777666 666677777777777777777777777763 67777777777777777655 4 45677
Q ss_pred HHHHhcCc
Q 007755 355 DCLARCGA 362 (591)
Q Consensus 355 ~~L~~~ga 362 (591)
++|.+.|+
T Consensus 157 ~~L~~~gA 164 (165)
T 3twr_A 157 DLLRGDAA 164 (165)
T ss_dssp HHHHTC--
T ss_pred HHHhhccc
Confidence 77776665
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=1.8e-26 Score=207.68 Aligned_cols=150 Identities=30% Similarity=0.409 Sum_probs=82.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Q 007755 130 ETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRG 209 (591)
Q Consensus 130 ~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 209 (591)
.||||.|+..|+.+++++|++.+.+.. .+..|.||||+|+..|+.+++++|+++|+++
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------------------- 60 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR------------------- 60 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-------------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------------------
Confidence 345555555555555555555443321 3444555555555555555555555554443
Q ss_pred CHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcC
Q 007755 210 HTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 210 ~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 289 (591)
+..+..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|
T Consensus 61 ----------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 123 (153)
T 1awc_B 61 ----------------DARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIKYG 123 (153)
T ss_dssp ----------------TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ----------------CCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 334445555555555555555555555555554 444555666666666666666666666665
Q ss_pred cccccCCCCCCCcHHHHHHHCCcHHHHHHH
Q 007755 290 AAIVMLPDKFGNTALHVATRKKRTEIVTEL 319 (591)
Q Consensus 290 ~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~L 319 (591)
++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 124 a~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 124 AD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 55 555566666666666666666666554
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=8.9e-27 Score=215.60 Aligned_cols=101 Identities=24% Similarity=0.334 Sum_probs=47.3
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHH
Q 007755 228 SRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVA 307 (591)
Q Consensus 228 ~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A 307 (591)
.|..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A 145 (179)
T 3f6q_A 68 MNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKA 145 (179)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHH
Confidence 3344444444444444444444444444444 33344444444444444444444444444444 444444455555555
Q ss_pred HHCCcHHHHHHHhcCCCCCccccc
Q 007755 308 TRKKRTEIVTELLSLPDTNVNALT 331 (591)
Q Consensus 308 ~~~g~~~iv~~Ll~~~g~~~~~~d 331 (591)
+..++.+++++|++ .|++++..+
T Consensus 146 ~~~~~~~~~~~L~~-~g~~~~~~~ 168 (179)
T 3f6q_A 146 KAPLRELLRERAEK-MGQNLNRIP 168 (179)
T ss_dssp CHHHHHHHHHHHHH-TTCCCSCBC
T ss_pred HHHHHHHHHHHHHH-hhcCcccCC
Confidence 44444445544444 244444443
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=8.3e-29 Score=238.83 Aligned_cols=192 Identities=20% Similarity=0.196 Sum_probs=166.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCH
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATP 201 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tp 201 (591)
.+..+..|.||||.|+..|+.++|++|++.|.+ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tp 90 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMND--PSQPNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTP 90 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCH
Confidence 345566778899999999999999999998764 5778999999999999999999999999999998 6778899999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcceecC-CCCCcHHHHH--HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCC
Q 007755 202 LVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFA--ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQS 278 (591)
Q Consensus 202 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpLh~A--~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~ 278 (591)
||+|+..|+.+++++|++++ .+++..+ .+|.||||+| +..|+.+++++|+++|+++ +..|..|.|++|.++..+.
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~~l~~~~~~~~ 168 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHG-AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMNSGAVYALWDYSAEFG 168 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTT-CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSGGGEEEESSCBCCSST
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccccCCchHHHHHHhhccc
Confidence 99999999999999999984 4555554 6999999999 9999999999999999998 6678899999997665543
Q ss_pred HHHHHHHHHcCccc-ccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 279 CEVVKLLLEADAAI-VMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 279 ~~~v~~Ll~~~~~~-~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
. ++|++.|+++ ++.+|.+|+||||+|+..|+.++|+.++-
T Consensus 169 ~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 169 D---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp T---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred c---ccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 3 5778888764 67789999999999999999999876543
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.5e-26 Score=214.14 Aligned_cols=165 Identities=19% Similarity=0.294 Sum_probs=151.1
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 007755 196 PSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVK 275 (591)
Q Consensus 196 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 275 (591)
..+.++|+.|+..|+.+++++|++..+.+++..+..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 346789999999999999999999888888888999999999999999999999999999998 6779999999999999
Q ss_pred CCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHH
Q 007755 276 GQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKD 355 (591)
Q Consensus 276 ~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~ 355 (591)
.|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++. |++++.+|..|+|||++|...+ ..++++
T Consensus 82 ~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~----~~~~~~ 155 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPL----RELLRE 155 (179)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHH----HHHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHH----HHHHHH
Confidence 9999999999999998 889999999999999999999999999994 9999999999999999998877 889999
Q ss_pred HHHhcCcccccc
Q 007755 356 CLARCGAVRANE 367 (591)
Q Consensus 356 ~L~~~ga~~~~~ 367 (591)
+|.+.|++....
T Consensus 156 ~L~~~g~~~~~~ 167 (179)
T 3f6q_A 156 RAEKMGQNLNRI 167 (179)
T ss_dssp HHHHTTCCCSCB
T ss_pred HHHHhhcCcccC
Confidence 999999986543
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=3.4e-26 Score=205.91 Aligned_cols=128 Identities=27% Similarity=0.390 Sum_probs=107.1
Q ss_pred hccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007755 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
+...+ .|..|.||||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++|+++ +..|..|
T Consensus 25 g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 100 (153)
T 1awc_B 25 GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS--RDARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLK 100 (153)
T ss_dssp TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTS
T ss_pred CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCC
Confidence 34444 588899999999999999999999998754 5678889999999999999999999999999887 5667778
Q ss_pred CCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHH
Q 007755 199 ATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKAL 251 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~L 251 (591)
.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|
T Consensus 101 ~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 101 MTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 8888888888888888888877 555666777788888888888888887765
No 75
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.3e-26 Score=211.32 Aligned_cols=157 Identities=27% Similarity=0.325 Sum_probs=83.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
|.+|.||||.|++.|+.+++++|++.+ ..+....+..|.||||+|+..|+.+++++|+++++++ +..|..|.||||
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~-- 80 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLH-- 80 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH--
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHH--
Confidence 445566666666666666666666542 2334445555566666666666666666666665554 333444444554
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHH
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLL 285 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L 285 (591)
+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|
T Consensus 81 --------------------------------~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 81 --------------------------------NACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp --------------------------------HHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred --------------------------------HHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 444445555555555554444 33445555555555555555555555
Q ss_pred HHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 286 LEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 286 l~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+++|++ ++.+|..|+||||+|+. |+.+++++|++
T Consensus 128 l~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 128 LQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 555544 44555555555555443 45555555554
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4.2e-26 Score=205.87 Aligned_cols=153 Identities=27% Similarity=0.396 Sum_probs=88.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
+.||||.|+..|+.+++++|++. ...+.+..+..|.||||+ +..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 35677777777777777777775 334456666677777777 6677777777777776665 34455555555555555
Q ss_pred CCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHH
Q 007755 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLE 287 (591)
Q Consensus 209 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 287 (591)
|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++. +++ +..|..|.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~-~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 79 GFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDL-HRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCT-TCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred CcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 555555555554 233444455555555555555555555555554 333 3344445555555555555555554443
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=6.3e-29 Score=256.34 Aligned_cols=222 Identities=19% Similarity=0.157 Sum_probs=167.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC-CccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCc--ccCCCCCCCHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEG-LTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLS--QTTGPSNATPL 202 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~--~~~~~~g~tpL 202 (591)
+.++.||||+||+.|+.++|++|+++++... ....+..|.||||+|+..|+.++|++|+++|++.. ...+.+ .|||
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 3445699999999999999999999876331 22345568899999999999999999999997531 112222 8999
Q ss_pred HHHHHcCCHHHHHHHHhccCCccee--cCCCCCcHHHHHH-HcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCH
Q 007755 203 VSAATRGHTAVVNELLSKDGGLLEI--SRSNGKNALHFAA-RQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSC 279 (591)
Q Consensus 203 ~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~g~tpLh~A~-~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 279 (591)
|+|+..|+.+++++|++++ .+++. .|..|.||||+|+ ..|+.+++++|++.|++ |.||||+|+.+|+.
T Consensus 168 h~Aa~~G~~eiv~~Ll~~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELA-PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------LAYAEIHEFEYGEK 238 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------HHHHHHCTTTTTTT
T ss_pred HHHHHCCCHHHHHHHHHcC-CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------cchHHHHHHHCCCH
Confidence 9999999999999999984 44444 6788999999999 99999999999996632 78999999999999
Q ss_pred HHHHHHHHcCcccccCCCCCCCcHHHHHHHC---------------------------CcHHHHHHHhcCCCCC----cc
Q 007755 280 EVVKLLLEADAAIVMLPDKFGNTALHVATRK---------------------------KRTEIVTELLSLPDTN----VN 328 (591)
Q Consensus 280 ~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~---------------------------g~~~iv~~Ll~~~g~~----~~ 328 (591)
+++++|+++|++ ++..| ++++.|+.. +..+.+++|++..+++ ..
T Consensus 239 evv~lL~~~ga~-~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g 313 (376)
T 2aja_A 239 YVNPFIARHVNR-LKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 313 (376)
T ss_dssp THHHHHHHHHHH-HHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCC
T ss_pred HHHHHHHhcCcc-ccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccC
Confidence 999999998876 22222 123333332 3345667776643221 12
Q ss_pred cccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccccc
Q 007755 329 ALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVRAN 366 (591)
Q Consensus 329 ~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~~~ 366 (591)
...+.+.|||++|+..| +.+++++|++.|..+..
T Consensus 314 ~~~n~~~~~L~~A~~~g----~~e~v~lLl~~~~v~~~ 347 (376)
T 2aja_A 314 TIPGDANELLRLALRLG----NQGACALLLSIPSVLAL 347 (376)
T ss_dssp SSTTCCCHHHHHHHHHT----CTTHHHHHTTSHHHHHS
T ss_pred CCCCCccHHHHHHHHcC----cHHHHHHHHcChHHHHH
Confidence 23346778999999999 88899999988765433
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=5.8e-26 Score=204.93 Aligned_cols=153 Identities=27% Similarity=0.341 Sum_probs=114.6
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcC
Q 007755 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQG 243 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 243 (591)
|.||||.|+..|+.++++.|++..+...+..+..|.||||+ +..|+.+++++|+++ +.+++..|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcC
Confidence 45788888888888888888877322335566777788888 777788888887776 4556667777778888888888
Q ss_pred CHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 244 HVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 244 ~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++. ++ ++.+|..|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 80 FLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 888888888777776 55677777888888877777888877777 54 67777777788888887777777777776
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=9e-27 Score=226.25 Aligned_cols=209 Identities=16% Similarity=0.142 Sum_probs=137.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
+..|.||||.|++.|+.+.++.|+++|++.+. +..|.||||.|+..|+.+++++|++.|+++ +..|..|.||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 34689999999999999999999998876543 366899999999999999999999999877 66788899999999
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCC-cHHHHH--HhCCCHHHH
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQ-TALHMA--VKGQSCEVV 282 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~-t~Lh~A--~~~g~~~~v 282 (591)
+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|+++|+++ +..+..|. ||||+| +..|+.+++
T Consensus 78 ~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp HHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhccHHHH
Confidence 999999999999988 5667888999999999999999999999999999998 44565555 999999 788999999
Q ss_pred HHHHHcCcccccCC---------CCCCCcHHHHHHHCCcHHHHHHHhcCCCCC------cccccCCCCCHHHHHhhC
Q 007755 283 KLLLEADAAIVMLP---------DKFGNTALHVATRKKRTEIVTELLSLPDTN------VNALTRDHKTALDIAEGL 344 (591)
Q Consensus 283 ~~Ll~~~~~~~~~~---------d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~------~~~~d~~G~t~L~~A~~~ 344 (591)
++|++++++ .+.. |..+.++++++.+.|. +++.|.+ .+.+ ....++.|.+|.++....
T Consensus 156 ~~Ll~~~a~-~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~-~~~~~~~Ww~~~~~~~~G~~P~~yv~~~ 228 (239)
T 1ycs_B 156 QFLYGVQEK-MGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR-EDEDEIEWWWARLNDKEGYVPRNLLGLY 228 (239)
T ss_dssp HHHHHHHHH-TTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC-CTTSCSSEEEEEETTEEEEEEGGGEECC
T ss_pred HHHHHhhhc-ccccccceEEEEeccCCCCCCcccccCCC--EEEEEEe-cCCCCCCEEEEEECCcEEEeehHHeeEC
Confidence 999998876 3333 5667888888877775 3333333 2222 234455566666665443
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.2e-26 Score=225.41 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=129.2
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHH
Q 007755 162 RSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAAR 241 (591)
Q Consensus 162 ~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 241 (591)
..|.||||.|+..|+.++++.|+++|.++. .+..|.||||.|+..|+.+++++|++.+ .+++..|..|.||||+|+.
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHH
Confidence 458999999999999999999999999884 3467899999999999999999999884 4788889999999999999
Q ss_pred cCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCC-cHHHHH--HHCCcHHHHHH
Q 007755 242 QGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGN-TALHVA--TRKKRTEIVTE 318 (591)
Q Consensus 242 ~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~-T~Lh~A--~~~g~~~iv~~ 318 (591)
.|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|. ||||+| +..|+.+++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 99999999999999998 77799999999999999999999999999998 677777776 999999 78899999999
Q ss_pred HhcCCCCCcccc---------cCCCCCHHHHHhhCC
Q 007755 319 LLSLPDTNVNAL---------TRDHKTALDIAEGLP 345 (591)
Q Consensus 319 Ll~~~g~~~~~~---------d~~G~t~L~~A~~~~ 345 (591)
|++. |++++.. +..|.++++++.+.+
T Consensus 158 Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 158 LYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp HHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred HHHh-hhcccccccceEEEEeccCCCCCCcccccCC
Confidence 9984 7777665 566788888877655
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4.7e-24 Score=192.59 Aligned_cols=144 Identities=19% Similarity=0.229 Sum_probs=98.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCc-HHHH
Q 007755 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQT-ALHM 272 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t-~Lh~ 272 (591)
.+..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+ .|+.+++++|+++|+++ +..|..|+| |||+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD 84 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 345566666666666666666666665 4455666777888888875 78888888888888877 666888888 8888
Q ss_pred HHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHh
Q 007755 273 AVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAE 342 (591)
Q Consensus 273 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~ 342 (591)
|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||.+-+.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC------------------
T ss_pred HHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccCC
Confidence 8888888889988888887 78888889999999999999999999988 48999999999988877543
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=2.6e-24 Score=200.08 Aligned_cols=156 Identities=17% Similarity=0.096 Sum_probs=120.9
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhccCCcceecC-CCCCcHHHHHHHcCCH----HHHHHHHhcCcccccccCCCCCcHHHH
Q 007755 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFAARQGHV----DVVKALLSKDPQLARRTDKKGQTALHM 272 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~d~~g~t~Lh~ 272 (591)
+.++|+.|+..|+.+.++.++..+. +..+ ..|+||||+|+..|+. +++++|+++|+++ +.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~---~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY---EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS---SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc---ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 3467778888888877777776532 2233 5688888888888764 4788888888887 6668888888888
Q ss_pred HHhCCC------HHHHHHHHHcCcccccCCCCCCC-cHHHHHHHCC-----cHHHHHHHhcCCCCCcccccCCCCCHHHH
Q 007755 273 AVKGQS------CEVVKLLLEADAAIVMLPDKFGN-TALHVATRKK-----RTEIVTELLSLPDTNVNALTRDHKTALDI 340 (591)
Q Consensus 273 A~~~g~------~~~v~~Ll~~~~~~~~~~d~~g~-T~Lh~A~~~g-----~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~ 340 (591)
|+..++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ +.+++++|++..|+|++.+|..|+||||+
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence 887776 5788888888888 788888888 8999888844 45688888885588999999999999999
Q ss_pred HhhCCCChhhHHHHHHHHhcCc
Q 007755 341 AEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 341 A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|.+.+ ..+++++|.++..
T Consensus 161 A~~~~----~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 161 VKRCQ----KPIALKMMEDYIK 178 (186)
T ss_dssp HHTTT----CHHHHHHHHHHHH
T ss_pred HHHcC----CHHHHHHHHHHHH
Confidence 98888 7777777776543
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=8.8e-24 Score=186.08 Aligned_cols=131 Identities=19% Similarity=0.225 Sum_probs=75.4
Q ss_pred cceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCC-CCc
Q 007755 224 LLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKF-GNT 302 (591)
Q Consensus 224 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~-g~T 302 (591)
.++..+..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|+. |+.+++++|+++|++ ++.+|.. |+|
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTR 80 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBC
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCC
Confidence 34445555555666666555666666655555554 4445555566666655 566666666655555 4555555 566
Q ss_pred HHHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCc
Q 007755 303 ALHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 303 ~Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga 362 (591)
|||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..+ +.+++++|+++|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~----~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQG----HRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHT----CHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcC----CHHHHHHHHHcCC
Confidence 6666666666666666655 35556666666666666665555 5555555555554
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=1.1e-23 Score=190.19 Aligned_cols=143 Identities=24% Similarity=0.331 Sum_probs=63.6
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCC-H
Q 007755 123 NEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNAT-P 201 (591)
Q Consensus 123 ~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~t-p 201 (591)
+..+..|.||||+|+..|+.++|++|++++.+ ++..|..|+||||+|+ .|+.+++++|+++|+++ +..|..|.| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN--PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC--TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 34455556666666666666666666655432 3445555556665553 55555555555555554 334444444 5
Q ss_pred HHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHH
Q 007755 202 LVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALH 271 (591)
Q Consensus 202 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh 271 (591)
||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT-RGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC-CccCcCcCcccc
Confidence 5555555555555444444 3333444444444444444444444444444444444 333444444433
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.2e-23 Score=183.49 Aligned_cols=129 Identities=25% Similarity=0.404 Sum_probs=56.5
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCC-CC
Q 007755 121 VVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPS-NA 199 (591)
Q Consensus 121 ~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~-g~ 199 (591)
.++..|..|.||||+|+..|+.+++++|++++.+ ++..|..|+||||+|+. |+.+++++|+++++++ +..|.. |.
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~ 79 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD--PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLT 79 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTB
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC--cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCC
Confidence 3444444555555555555555555555544322 33344444555555554 5555555555444443 222333 44
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007755 200 TPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSK 254 (591)
Q Consensus 200 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 254 (591)
||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 444444444444444444433 222333334444444444444444444444433
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=8.6e-24 Score=196.57 Aligned_cols=154 Identities=19% Similarity=0.113 Sum_probs=104.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCC-CCCCcHHHHHHHhCcH----HHHHHHHhCCCCCcccCCCCCCCHHH
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKN-RSGFDPLHIAAVQGHH----AIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~----~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
+.++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+.+|+. +++++|+++|+++ +..|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence 4578899999999998888887542 2233 6688999999988865 4888888888887 566778888888
Q ss_pred HHHHcCC------HHHHHHHHhccCCcceecCCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCcccccccCCCCCcHH
Q 007755 204 SAATRGH------TAVVNELLSKDGGLLEISRSNGK-NALHFAARQG-----HVDVVKALLS-KDPQLARRTDKKGQTAL 270 (591)
Q Consensus 204 ~A~~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-tpLh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~d~~g~t~L 270 (591)
+|+..|+ .+++++|+++ +.+++..|..|. ||||+|+..+ +.+++++|++ +|+++ +.+|..|+|||
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL 158 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTAL 158 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHH
Confidence 8888776 4556666665 455566666666 6666666633 2345566665 55555 44555666666
Q ss_pred HHHHhCCCHHHHHHHHHcC
Q 007755 271 HMAVKGQSCEVVKLLLEAD 289 (591)
Q Consensus 271 h~A~~~g~~~~v~~Ll~~~ 289 (591)
|+|++.|+.+++++|.++.
T Consensus 159 ~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 159 EFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 6666666666666655543
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=6.3e-22 Score=170.99 Aligned_cols=124 Identities=43% Similarity=0.597 Sum_probs=62.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCC
Q 007755 232 GKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKK 311 (591)
Q Consensus 232 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g 311 (591)
|.||||.|+..|+.+++++|++.++++ +..|..|.||||+|+..++.+++++|+++|++ ++.+|..|+||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcC
Confidence 445555555555555555555554444 33344555555555555555555555555444 4444555555555555555
Q ss_pred cHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCc
Q 007755 312 RTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGA 362 (591)
Q Consensus 312 ~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga 362 (591)
+.+++++|++. |++++.+|..|+|||++|+..+ +.+++++|.++|+
T Consensus 80 ~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~----~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 80 HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNG----HLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHTC
T ss_pred hHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcC----cHHHHHHHHHcCC
Confidence 55555555542 4555555555555555555544 4455555555444
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=2.8e-22 Score=176.44 Aligned_cols=123 Identities=32% Similarity=0.368 Sum_probs=64.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHC
Q 007755 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
.+.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHc
Confidence 3445555555555555555555555554 33455555555555555555555555555544 444555555555555555
Q ss_pred CcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc
Q 007755 311 KRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC 360 (591)
Q Consensus 311 g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ 360 (591)
|+.+++++|++. |++++.+|..|+||||+|+..+ +.+++++|.+.
T Consensus 91 ~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~----~~~~~~~Ll~~ 135 (136)
T 2jab_A 91 GHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNG----NEDLAEILQKL 135 (136)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHC
T ss_pred CCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCC----CHHHHHHHHHc
Confidence 555555555552 5555555555555555555555 44555555443
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.1e-21 Score=169.37 Aligned_cols=123 Identities=41% Similarity=0.641 Sum_probs=59.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHc
Q 007755 129 GETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATR 208 (591)
Q Consensus 129 g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 208 (591)
|.||||.|+..|+.+++++|++++.+ ++..+..|.||||+|+..|+.+++++|+++++++ +..+..|.||||+|+..
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 55555555555555555555554432 3344555555555555555555555555555544 23334444444444444
Q ss_pred CCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 007755 209 GHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKD 255 (591)
Q Consensus 209 g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~ 255 (591)
|+.+++++|+++ +..++..|..|.||||+|+..|+.+++++|+++|
T Consensus 79 ~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 79 GHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 444444444443 2223333444444444444444444444444443
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=9.8e-22 Score=172.90 Aligned_cols=125 Identities=27% Similarity=0.378 Sum_probs=68.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSA 205 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A 205 (591)
...|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD--VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 34456666666666666666666665433 3445555666666666666666666666665554 33444555555555
Q ss_pred HHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007755 206 ATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSK 254 (591)
Q Consensus 206 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ 254 (591)
+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|+++
T Consensus 88 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 555555555555544 333444445555555555555555555555443
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=2.3e-22 Score=177.15 Aligned_cols=127 Identities=25% Similarity=0.295 Sum_probs=102.6
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007755 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHH
Confidence 46778888888888888888888888888877 56688888888888888888888888888877 77788888888888
Q ss_pred HHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhc
Q 007755 307 ATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARC 360 (591)
Q Consensus 307 A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ 360 (591)
|+..|+.+++++|++. |++++.+|..|+||+|+|...+ ..+++++|.+.
T Consensus 83 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~----~~~~l~~l~~~ 131 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDES----MKSLLLLPEKN 131 (137)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHH----HHHHHSCC---
T ss_pred HHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhcc----HHHHHhhcccc
Confidence 8888888888888884 8888888888888888887655 55555554443
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=7.9e-22 Score=182.99 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=112.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHH
Q 007755 124 EVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 124 ~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
..+..|.||||+|+..|+.+++++|++ +. +++..|..|+||||+|+..|+.+++++|+++|++++...+..|.||||
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHH
Confidence 345678999999999999999999998 54 467788899999999999999999999999999885444477888888
Q ss_pred HHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHH
Q 007755 204 SAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVK 283 (591)
Q Consensus 204 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~ 283 (591)
+|+..|+.+++++|+++ +.+++..|.+|.||||+|+..++ ...+.++|++|+..|..++++
T Consensus 116 ~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~~i~~ 176 (183)
T 3deo_A 116 MAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVIN 176 (183)
T ss_dssp HHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHHHHHH
Confidence 88888888888888877 45567777888888888876321 134567777777777777777
Q ss_pred HHHHc
Q 007755 284 LLLEA 288 (591)
Q Consensus 284 ~Ll~~ 288 (591)
+|.++
T Consensus 177 ~L~~~ 181 (183)
T 3deo_A 177 VLEGQ 181 (183)
T ss_dssp HHHTC
T ss_pred HHHHh
Confidence 77653
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=7e-22 Score=192.27 Aligned_cols=143 Identities=22% Similarity=0.220 Sum_probs=102.4
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHH
Q 007755 125 VNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVS 204 (591)
Q Consensus 125 ~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~ 204 (591)
.+..|.||||+|+..|+.++|++|++ +. +++..|..|+||||+|+..|+.+++++|+++|++++...+..|.||||+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TC--CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHH
Confidence 34568888999998899998888888 54 4567788888888888888888888888888888744444667777777
Q ss_pred HHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHH
Q 007755 205 AATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKL 284 (591)
Q Consensus 205 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 284 (591)
|+..|+.+++++|+++ +.+++..|..|.||||+|+..++ ...+.||||+|+..|+.+++++
T Consensus 118 A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~ 178 (244)
T 3ui2_A 118 AAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINV 178 (244)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHH
Confidence 7777777777777776 45566667777777777764211 2345566666666666666666
Q ss_pred HHHcC
Q 007755 285 LLEAD 289 (591)
Q Consensus 285 Ll~~~ 289 (591)
|++.+
T Consensus 179 L~~~~ 183 (244)
T 3ui2_A 179 LEGQV 183 (244)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66543
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.1e-21 Score=188.91 Aligned_cols=143 Identities=25% Similarity=0.296 Sum_probs=125.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHh
Q 007755 71 GRHNDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLK 150 (591)
Q Consensus 71 ~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~ 150 (591)
+.+|.||||.|++.|+.++++.|++ +..++.+|..|.||||+|+..|+.++|++|++
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 98 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-----------------------DRDVDAVDENGRTALLFVAGLGSDKCVRLLAE 98 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-----------------------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-----------------------CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 3467899999999999999999997 33478889999999999999999999999999
Q ss_pred cCCCcCCccCC-CCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecC
Q 007755 151 YSTKEGLTRKN-RSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR 229 (591)
Q Consensus 151 ~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 229 (591)
+|++ ++..+ ..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..++ .
T Consensus 99 ~ga~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~ 157 (244)
T 3ui2_A 99 AGAD--LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------T 157 (244)
T ss_dssp TTCC--TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------T
T ss_pred cCCC--CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------c
Confidence 8765 45556 78999999999999999999999999998 6788999999999986321 2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 007755 230 SNGKNALHFAARQGHVDVVKALLSKDPQ 257 (591)
Q Consensus 230 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~ 257 (591)
..+.||||+|+..|+.+++++|++.+.+
T Consensus 158 ~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 158 TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 5689999999999999999999987544
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=7.7e-21 Score=190.65 Aligned_cols=140 Identities=24% Similarity=0.250 Sum_probs=92.7
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhCCCCCccc-----CCCCCCCHHHHHHHc---CCHHHHHHHHhccCCcceecCCCCCcH
Q 007755 164 GFDPLHIAAVQGHHAIVQVLLDHDPSLSQT-----TGPSNATPLVSAATR---GHTAVVNELLSKDGGLLEISRSNGKNA 235 (591)
Q Consensus 164 g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tp 235 (591)
+.++||.|+..|+.+.++.|++.++++... .+..|.||||+|+.. |+.+++++|+++ +.+++..|.+|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCH
Confidence 446678888888887777777777776432 456667777777765 667777777766 44556666777777
Q ss_pred HHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCc
Q 007755 236 LHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKR 312 (591)
Q Consensus 236 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~ 312 (591)
||+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|++++++ .|.||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence 77777777777777777777776 55677777777777777777777777776654 36677777776664
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=1.4e-21 Score=172.08 Aligned_cols=125 Identities=26% Similarity=0.315 Sum_probs=82.2
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHH
Q 007755 194 TGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMA 273 (591)
Q Consensus 194 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A 273 (591)
.|..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|+++++++ +..|..|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHHH
Confidence 344555555555555555555555554 3344555666677777777777777777777776665 55567777777777
Q ss_pred HhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhc
Q 007755 274 VKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLS 321 (591)
Q Consensus 274 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~ 321 (591)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|.+
T Consensus 84 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 777777777777777776 66777777777777777777776665544
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=4.7e-21 Score=177.75 Aligned_cols=139 Identities=23% Similarity=0.254 Sum_probs=105.1
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecC-CCCCcHHHHH
Q 007755 161 NRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISR-SNGKNALHFA 239 (591)
Q Consensus 161 ~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpLh~A 239 (591)
+..|.||||.|+..|+.++++.|++ +.++ +..|..|.||||+|+..|+.+++++|+++ +.+++..+ .+|.||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHH
Confidence 4567888888888888888888888 6665 55677788888888888888888888877 44455555 7788888888
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHH
Q 007755 240 ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTEL 319 (591)
Q Consensus 240 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~L 319 (591)
+..|+.+++++|+++|+++ +.+|..|+||||+|++.++. ..+.++|++|++.|+.+++++|
T Consensus 118 ~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 118 AGYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHH
Confidence 8888888888888888777 56677888888888753211 2356788888888888888877
Q ss_pred hc
Q 007755 320 LS 321 (591)
Q Consensus 320 l~ 321 (591)
.+
T Consensus 179 ~~ 180 (183)
T 3deo_A 179 EG 180 (183)
T ss_dssp HT
T ss_pred HH
Confidence 65
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=3.5e-21 Score=166.13 Aligned_cols=111 Identities=27% Similarity=0.325 Sum_probs=99.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007755 229 RSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 229 ~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
+..|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHH
Confidence 456889999999999999999999999887 66788999999999999999999999999988 7888999999999999
Q ss_pred HCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHh
Q 007755 309 RKKRTEIVTELLSLPDTNVNALTRDHKTALDIAE 342 (591)
Q Consensus 309 ~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~ 342 (591)
..|+.+++++|++. |++++.+|..|+||+|+|.
T Consensus 82 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhC
Confidence 99999999999995 9999999999999999994
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=3e-20 Score=184.14 Aligned_cols=127 Identities=22% Similarity=0.265 Sum_probs=102.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCcccc-----cccCCCCCcHHHHHHhC---CCHHHHHHHHHcCcccccCCCCCCCcH
Q 007755 232 GKNALHFAARQGHVDVVKALLSKDPQLA-----RRTDKKGQTALHMAVKG---QSCEVVKLLLEADAAIVMLPDKFGNTA 303 (591)
Q Consensus 232 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~-----~~~d~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~T~ 303 (591)
..++|+.|+..|+.+.+..+++.|+++. +..|..|+||||+|+.. |+.+++++|+++|++ ++.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCH
Confidence 3467888888888888888888887753 23377788888888887 788888888888887 77888888888
Q ss_pred HHHHHHCCcHHHHHHHhcCCCCCcccccCCCCCHHHHHhhCCCChhhHHHHHHHHhcCccc
Q 007755 304 LHVATRKKRTEIVTELLSLPDTNVNALTRDHKTALDIAEGLPSSEEASEIKDCLARCGAVR 364 (591)
Q Consensus 304 Lh~A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L~~A~~~~~~~~~~~i~~~L~~~ga~~ 364 (591)
||+|+..|+.+++++|++ .|+|++.+|..|+||||+|+..+ +.+++++|+++|+.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~----~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLK----HEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT----CHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcC----CHHHHHHHHHcCCCC
Confidence 888888888888888888 58888888888888888888888 778888888887753
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=1.2e-20 Score=189.37 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=115.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccc------cCCCCCcHHHHHHHc---CCHHH
Q 007755 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNE------VNELGETALFTAADK---GHIEV 144 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~TpL~~Aa~~---g~~~~ 144 (591)
+.++||.|+..|+.+.++.|++. +..++. .|..|.||||+|+.. |+.++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~----------------------g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~i 208 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN----------------------GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPL 208 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT----------------------TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhc----------------------CCcccccCCCcccCCCCccHHHHHHHhcccCcHHH
Confidence 44789999999999999999976 344454 588999999999997 89999
Q ss_pred HHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCc
Q 007755 145 VNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL 224 (591)
Q Consensus 145 v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 224 (591)
+++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++++.
T Consensus 209 v~~Ll~~gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga-- 283 (301)
T 2b0o_E 209 VDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQA-- 283 (301)
T ss_dssp HHHHHHHSSC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH--
T ss_pred HHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC--
Confidence 9999998765 5778899999999999999999999999999998 6788899999999999999999999998743
Q ss_pred ceecCCCCCcHHHHHHHcCCH
Q 007755 225 LEISRSNGKNALHFAARQGHV 245 (591)
Q Consensus 225 ~~~~~~~g~tpLh~A~~~g~~ 245 (591)
..|.||||+|+..|+.
T Consensus 284 -----~~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 284 -----GTFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----HTTSSCCC--------
T ss_pred -----CCCCChhHHHHhcCCc
Confidence 2588999999988764
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=6e-21 Score=182.72 Aligned_cols=132 Identities=25% Similarity=0.326 Sum_probs=73.9
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhC-CCCCcccCCCCCCC
Q 007755 122 VNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDH-DPSLSQTTGPSNAT 200 (591)
Q Consensus 122 ~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~g~t 200 (591)
++..+..|.||||+|+..|+.++|++|++.+.+ ++..|..|+||||+|+..|+.+++++|+++ +.++ +..|..|.|
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~t 142 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG--VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDT 142 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCC
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCC
Confidence 344566667777777777777777777765533 455566667777777777777777766666 5444 444555555
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcc
Q 007755 201 PLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQ 257 (591)
Q Consensus 201 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~ 257 (591)
|||+|+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.++++.|++.++.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 55555555555555555555 334444555555555555555555555555555444
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.3e-20 Score=185.02 Aligned_cols=192 Identities=21% Similarity=0.264 Sum_probs=144.1
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHH
Q 007755 124 EVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLV 203 (591)
Q Consensus 124 ~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~ 203 (591)
..|..+.+.|+++...|+..+.+++............+ .+.... .....-..+++................++|+
T Consensus 61 ~~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~-~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 61 TLDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPN-PGSDMI----ARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp TTSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCC-TTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCC-CCCCHH----HHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 36778899999999999988877665432211110111 111221 1222223334443322221222222347899
Q ss_pred HHHHcCCHHHHHHHHhccCCc-----ceecCCCCCcHHHHHHHc---CCHHHHHHHHhcCcccccccCCCCCcHHHHHHh
Q 007755 204 SAATRGHTAVVNELLSKDGGL-----LEISRSNGKNALHFAARQ---GHVDVVKALLSKDPQLARRTDKKGQTALHMAVK 275 (591)
Q Consensus 204 ~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~ 275 (591)
.|+..|+.+.+..+++.+... ++..+..|.||||+|+.. |+.+++++|+++|+++ +..|..|+||||+|+.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHHHHHHH
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHHHHHHH
Confidence 999999999999999885543 344578899999999999 8999999999999998 6779999999999999
Q ss_pred CCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcC
Q 007755 276 GQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL 322 (591)
Q Consensus 276 ~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 322 (591)
.|+.+++++|+++|++ ++.+|.+|.||||+|+..|+.+++++|++.
T Consensus 215 ~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 215 TDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999998 899999999999999999999999999985
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.3e-20 Score=162.57 Aligned_cols=108 Identities=27% Similarity=0.345 Sum_probs=62.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCC
Q 007755 198 NATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQ 277 (591)
Q Consensus 198 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g 277 (591)
|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+.+++++|++.|+++ +..|..|+||||+|+..|
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcC
Confidence 44555555555555555555544 2334444555666666666666666666666666555 445666666666666666
Q ss_pred CHHHHHHHHHcCcccccCCCCCCCcHHHHHH
Q 007755 278 SCEVVKLLLEADAAIVMLPDKFGNTALHVAT 308 (591)
Q Consensus 278 ~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~ 308 (591)
+.+++++|+++|++ ++.+|.+|+||||+|.
T Consensus 85 ~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD-KTVKGPDGLTAFEATD 114 (123)
T ss_dssp CHHHHHHHHHTTCC-TTCCCTTSCCHHHHCC
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHhC
Confidence 66666666666655 5556666666666663
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=7.3e-21 Score=182.13 Aligned_cols=130 Identities=27% Similarity=0.325 Sum_probs=78.6
Q ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCcceecCCCCCcHHHHH
Q 007755 160 KNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGLLEISRSNGKNALHFA 239 (591)
Q Consensus 160 ~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 239 (591)
.+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|++..+.+++..|..|.||||+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAA 147 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHH
Confidence 4666788888888888888888888887776 455566666666666666666666666654555555555555566655
Q ss_pred HHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcc
Q 007755 240 ARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAA 291 (591)
Q Consensus 240 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 291 (591)
+..|+.+++++|+++|+++ +..|..|+||||+|+..++.++++.|++.++.
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 5555555555555555554 34455555555555555555555555554443
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=7e-19 Score=180.59 Aligned_cols=148 Identities=20% Similarity=0.225 Sum_probs=104.6
Q ss_pred cCCCCChHHHHHHHc-CCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccC--CCCCcHHHHHHHcCCHHHHH
Q 007755 70 TGRHNDTELHLAAQR-GDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVN--ELGETALFTAADKGHIEVVN 146 (591)
Q Consensus 70 ~~~~g~t~Lh~Aa~~-g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~TpL~~Aa~~g~~~~v~ 146 (591)
...++.|+||.|+.. |+.++++.||+. +..++..| ..|.||||+|+..|+.++|+
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~----------------------Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~ 252 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAH----------------------GADVNWVNGGQDNATPLIQATAANSLLACE 252 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHT----------------------TCCTTCCCTTTTCCCHHHHHHHTTCHHHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHc----------------------CCCCCccccccCCCCHHHHHHHCCCHHHHH
Confidence 344566889999988 899999998876 56677777 78889999999999999999
Q ss_pred HHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHhccCCc--
Q 007755 147 ELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSNATPLVSAATRGHTAVVNELLSKDGGL-- 224 (591)
Q Consensus 147 ~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~-- 224 (591)
+|+++|++ ++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+......
T Consensus 253 ~LL~~Gad--vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~ 329 (368)
T 3jue_A 253 FLLQNGAN--VNQADSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAE 329 (368)
T ss_dssp HHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----
T ss_pred HHHHcCCC--CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc
Confidence 99987654 5677888889999999999999999999988887 667788888888888888888888888764322
Q ss_pred ceecCCCCCcHHHHHHHc
Q 007755 225 LEISRSNGKNALHFAARQ 242 (591)
Q Consensus 225 ~~~~~~~g~tpLh~A~~~ 242 (591)
....+..+.|+++.+...
T Consensus 330 ~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 330 AAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp ------------------
T ss_pred ccccCCCCCCHHHHHHHH
Confidence 223345566666665543
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.77 E-value=7.7e-19 Score=180.29 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=93.2
Q ss_pred CCCHHHHHHHc-CCHHHHHHHHhccCCcceecC--CCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHH
Q 007755 198 NATPLVSAATR-GHTAVVNELLSKDGGLLEISR--SNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAV 274 (591)
Q Consensus 198 g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~ 274 (591)
+.|+||.|+.. |+.++++.|+++ +.+++..+ ..|.||||+|+..|+.+++++|+++|+++ +..|..|+||||+|+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 34677777777 777777777776 44455555 67788888888888888888888888777 566778888888888
Q ss_pred hCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHCCcHHHHHHHhcC--CCCCcccccCCCCCHHHHHhhCC
Q 007755 275 KGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRKKRTEIVTELLSL--PDTNVNALTRDHKTALDIAEGLP 345 (591)
Q Consensus 275 ~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~--~g~~~~~~d~~G~t~L~~A~~~~ 345 (591)
..|+.+++++|+++|++ ++.+|.+|.||||+|+..|+.+++++|+.. .+.+....+..+.|+++++....
T Consensus 277 ~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 277 ILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 88888888888888777 677788888888888888888888877753 23444556667777777776543
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=5.1e-19 Score=150.48 Aligned_cols=109 Identities=38% Similarity=0.481 Sum_probs=98.9
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007755 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
.+|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..++.+++++|+++|++ ++.+|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHH
Confidence 46789999999999999999999999999987 66789999999999999999999999999988 78899999999999
Q ss_pred HHHCCcHHHHHHHhcCCCCCcccccCCCCCHH
Q 007755 307 ATRKKRTEIVTELLSLPDTNVNALTRDHKTAL 338 (591)
Q Consensus 307 A~~~g~~~iv~~Ll~~~g~~~~~~d~~G~t~L 338 (591)
|+..|+.+++++|++ .|+++|.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHT-TSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHH-cCCCCCcCCccccccc
Confidence 999999999999998 5999999999999873
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.3e-18 Score=141.88 Aligned_cols=92 Identities=48% Similarity=0.686 Sum_probs=64.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHHC
Q 007755 231 NGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATRK 310 (591)
Q Consensus 231 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~~ 310 (591)
+|+||||+|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHc
Confidence 3667777777777777777777777766 55577777777777777777777777777766 666677777777777777
Q ss_pred CcHHHHHHHhcCCCC
Q 007755 311 KRTEIVTELLSLPDT 325 (591)
Q Consensus 311 g~~~iv~~Ll~~~g~ 325 (591)
|+.+++++|++. |+
T Consensus 79 ~~~~~~~~Ll~~-ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEA-GA 92 (93)
T ss_dssp TCHHHHHHHHHT-TC
T ss_pred CCHHHHHHHHHc-CC
Confidence 777777777763 44
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=1.5e-18 Score=186.62 Aligned_cols=98 Identities=28% Similarity=0.340 Sum_probs=65.6
Q ss_pred CCCCCcHHHHHHH---cCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHH
Q 007755 229 RSNGKNALHFAAR---QGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALH 305 (591)
Q Consensus 229 ~~~g~tpLh~A~~---~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh 305 (591)
+..|.||||+|+. .|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALD 245 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 5566677777754 66677777777777766 55566777777777777777777777777766 6666777777777
Q ss_pred HHHHCCcHHHHHHHhcCCCCCccc
Q 007755 306 VATRKKRTEIVTELLSLPDTNVNA 329 (591)
Q Consensus 306 ~A~~~g~~~iv~~Ll~~~g~~~~~ 329 (591)
+|+..|+.+++++|++ .|++++.
T Consensus 246 ~A~~~~~~~~~~~Ll~-~ga~~~~ 268 (497)
T 3lvq_E 246 IARKKHHKECEELLEQ-AQAGTFA 268 (497)
T ss_dssp HHHHTTCHHHHHHHHH-TCC----
T ss_pred HHHHcCCHHHHHHHHH-hCCCCCC
Confidence 7777777777777776 3666665
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=2e-18 Score=140.81 Aligned_cols=91 Identities=41% Similarity=0.608 Sum_probs=47.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHcCCCcccccccCCCcchhHHHHhhhccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 007755 74 NDTELHLAAQRGDLGAVKQILYGIDSQMVGNLSGAEFDTEVAEIRSSVVNEVNELGETALFTAADKGHIEVVNELLKYST 153 (591)
Q Consensus 74 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~ 153 (591)
|.||||.|+..|+.+++++|++. +..++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~----------------------g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 59 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA----------------------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT----------------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc----------------------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44555555555555555555543 33445555555555555555555555555555443
Q ss_pred CcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCC
Q 007755 154 KEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDP 188 (591)
Q Consensus 154 ~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~ 188 (591)
+ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 60 ~--~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 60 D--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp C--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred C--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 2 33445555555555555555555555555543
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=3.8e-18 Score=183.47 Aligned_cols=135 Identities=25% Similarity=0.318 Sum_probs=85.0
Q ss_pred cHHHHHHHhCcHHHHHHHHhCCCCCccc-----CCCCCCCHHHHHHH---cCCHHHHHHHHhccCCcceecCCCCCcHHH
Q 007755 166 DPLHIAAVQGHHAIVQVLLDHDPSLSQT-----TGPSNATPLVSAAT---RGHTAVVNELLSKDGGLLEISRSNGKNALH 237 (591)
Q Consensus 166 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~-----~~~~g~tpL~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~tpLh 237 (591)
+.||.|+..|+.++++.|++.|++++.. .+..|.||||+|+. .|+.+++++|+++ +.+++..|.+|.||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHH
Confidence 5677777777777777777766665322 25566777777754 6677777777766 4556666777777777
Q ss_pred HHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHHHHH
Q 007755 238 FAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHVATR 309 (591)
Q Consensus 238 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~A~~ 309 (591)
+|+..|+.+++++|+++|+++ +..|..|+||||+|+..|+.+++++|+++|++. + .||+|.+..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~-~------~~~~h~~~~ 276 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAGT-F------AFPLHVDYS 276 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC-C------CCcceeecc
Confidence 777777777777777777776 555777777777777777777777777777662 2 256666543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=1.7e-17 Score=140.95 Aligned_cols=62 Identities=37% Similarity=0.609 Sum_probs=26.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCC
Q 007755 126 NELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPS 189 (591)
Q Consensus 126 ~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~ 189 (591)
|.+|.||||+|+..|+.+++++|++++.+ ++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 67 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD--VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC--SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 44444444444444444444444443322 233344444444444444444444444444443
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.64 E-value=5.4e-16 Score=130.61 Aligned_cols=91 Identities=37% Similarity=0.488 Sum_probs=67.3
Q ss_pred ecCCCCCcHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCcHHHHHHhCCCHHHHHHHHHcCcccccCCCCCCCcHHHH
Q 007755 227 ISRSNGKNALHFAARQGHVDVVKALLSKDPQLARRTDKKGQTALHMAVKGQSCEVVKLLLEADAAIVMLPDKFGNTALHV 306 (591)
Q Consensus 227 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T~Lh~ 306 (591)
..|.+|.||||+|+..|+.+++++|++.++++ +..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFGKTAFDI 96 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCCCcHHHH
Confidence 34667777777777777777777777777776 55577777777777777777777777777776 67777777777777
Q ss_pred HHHCCcHHHHHHH
Q 007755 307 ATRKKRTEIVTEL 319 (591)
Q Consensus 307 A~~~g~~~iv~~L 319 (591)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 7777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=9.7e-16 Score=129.04 Aligned_cols=96 Identities=22% Similarity=0.319 Sum_probs=78.5
Q ss_pred hccccccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCCccCCCCCCcHHHHHHHhCcHHHHHHHHhCCCCCcccCCCCC
Q 007755 119 SSVVNEVNELGETALFTAADKGHIEVVNELLKYSTKEGLTRKNRSGFDPLHIAAVQGHHAIVQVLLDHDPSLSQTTGPSN 198 (591)
Q Consensus 119 ~~~~~~~~~~g~TpL~~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~g 198 (591)
+......|.+|.||||+|+..|+.+++++|++++.+ ++.+|..|+||||+|+..|+.+++++|+++|+++ +..|..|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g 90 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD--VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFG 90 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCC
Confidence 445677888999999999999999999999997654 5677889999999999999999999999999887 5677889
Q ss_pred CCHHHHHHHcCCHHHHHHH
Q 007755 199 ATPLVSAATRGHTAVVNEL 217 (591)
Q Consensus 199 ~tpL~~A~~~g~~~~v~~L 217 (591)
.||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 9999999999999998876
No 115
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=60.47 E-value=5.8 Score=25.96 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=18.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhhheeec
Q 007755 524 HEWAAILVTVVGGLIMAGVLGTMTYYVVKS 553 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (591)
....+|...+++++..+..++...+++.+.
T Consensus 7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 344567778888777766666555554443
No 116
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=59.84 E-value=4.4 Score=26.54 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=18.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhhheeec
Q 007755 524 HEWAAILVTVVGGLIMAGVLGTMTYYVVKS 553 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (591)
....+|...++++++++.+++..++|+.+.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 344567778888777766666555554443
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=37.45 E-value=40 Score=33.03 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 007755 496 VINKLMWLASVCTSVAFIASSYI 518 (591)
Q Consensus 496 ~~~~~~~~~~~~~~~af~~~~~~ 518 (591)
.++.|..++.+++...|++|+|=
T Consensus 278 ~mk~LTiit~IflP~T~IaGiyG 300 (339)
T 4ev6_A 278 IMKILTMVTTIFAVPMWITGIYG 300 (339)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Confidence 34456788899999999999984
No 118
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=31.28 E-value=36 Score=23.24 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=16.1
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhh
Q 007755 524 HEWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
..|..|++.++++++++.++..++|
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567777777777766655554
No 119
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.68 E-value=50 Score=22.59 Aligned_cols=25 Identities=28% Similarity=0.384 Sum_probs=15.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhh
Q 007755 524 HEWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
..|..|++.++++++++.++..++|
T Consensus 10 vp~wiIi~svl~GLllL~li~~~Lw 34 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMW 34 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566777777777766555554
No 120
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=26.52 E-value=60 Score=32.10 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 007755 496 VINKLMWLASVCTSVAFIASSY 517 (591)
Q Consensus 496 ~~~~~~~~~~~~~~~af~~~~~ 517 (591)
.++.|..++.+++...|++|+|
T Consensus 302 imk~LTiit~IflP~T~IaGiy 323 (363)
T 2iub_A 302 VMKVLTIIATIFMPLTFIAGIY 323 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 4455778899999999999998
No 121
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=25.75 E-value=33 Score=22.39 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=11.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhe
Q 007755 525 EWAAILVTVVGGLIMAGVLGTMTYYV 550 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (591)
...+|...++| ++++.+++..+++.
T Consensus 10 ~~~~Ia~~vVG-vll~vi~~l~~~~~ 34 (44)
T 2jwa_A 10 PLTSIISAVVG-ILLVVVLGVVFGIL 34 (44)
T ss_dssp SHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred cccchHHHHHH-HHHHHHHHHHHHhh
Confidence 33445566666 34443444444333
No 122
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=25.17 E-value=24 Score=34.74 Aligned_cols=96 Identities=7% Similarity=0.083 Sum_probs=43.4
Q ss_pred cCCCCCcHHHHHHhCCCHHHHHHHHHcC--cccccCCCCCCCcHHHHHHHCCcHH----HHHHHhcCC-C----CCcccc
Q 007755 262 TDKKGQTALHMAVKGQSCEVVKLLLEAD--AAIVMLPDKFGNTALHVATRKKRTE----IVTELLSLP-D----TNVNAL 330 (591)
Q Consensus 262 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~T~Lh~A~~~g~~~----iv~~Ll~~~-g----~~~~~~ 330 (591)
.|..|+-.+..+.+.+..+..+.+++.- .-..-..++.|...+.-+...+..+ +++.++... | ...-..
T Consensus 213 ~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~ii~el~~~~~~~~~~l~~l~~ 292 (351)
T 3gvo_A 213 QDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMK 292 (351)
T ss_dssp TSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHSCEETTEEHHHHHHH
T ss_pred CCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHHHHHHhcccCCCChHHHHccC
Confidence 3555555555555555555444444421 1111123445555555555444332 344444311 0 011235
Q ss_pred cCCCCCHHHHHhhCCCChhhHHHHHHH
Q 007755 331 TRDHKTALDIAEGLPSSEEASEIKDCL 357 (591)
Q Consensus 331 d~~G~t~L~~A~~~~~~~~~~~i~~~L 357 (591)
|..|+-.+..+...........+++.+
T Consensus 293 d~ygnyViq~~L~~~~~~~r~~i~~~i 319 (351)
T 3gvo_A 293 DQYANYVVQKMIDMAEPAQRKIIMHKI 319 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhCCHHHHHHHHHHH
Confidence 667776666666555333334444443
No 123
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=24.54 E-value=52 Score=24.51 Aligned_cols=24 Identities=17% Similarity=0.592 Sum_probs=15.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhh
Q 007755 525 EWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
...+|+..+++++++++++..+++
T Consensus 9 n~~~Iv~gvi~gilliGllllliw 32 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLAALLIW 32 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHH
Confidence 345566677777777766655554
No 124
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=23.62 E-value=2.9e+02 Score=28.14 Aligned_cols=30 Identities=3% Similarity=0.005 Sum_probs=14.3
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhcccccchh
Q 007755 460 IFFIFNAIALFTSLAVVVVQITLVRGETKA 489 (591)
Q Consensus 460 ~f~~~~~~a~~~S~~~~~~~~~~~~~~~~~ 489 (591)
+.++.++-....+.+..++.-.+..++...
T Consensus 343 ~P~v~~~gGn~Gtq~~t~~ir~la~~~~~~ 372 (473)
T 2zy9_A 343 VPVLLGTGGNTGNQSATLIIRALATRDLDL 372 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSSCG
T ss_pred HHHHHhhcCcHHHHHHHHHHHHHhcCCCCH
Confidence 344555555555555444444444444433
No 125
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=22.67 E-value=79 Score=20.34 Aligned_cols=24 Identities=29% Similarity=0.430 Sum_probs=15.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhh
Q 007755 525 EWAAILVTVVGGLIMAGVLGTMTY 548 (591)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~ 548 (591)
.|..|++.+++++.++.++..++|
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777777777766555554
No 126
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=21.46 E-value=44 Score=24.24 Aligned_cols=8 Identities=63% Similarity=0.800 Sum_probs=3.1
Q ss_pred HHHHHHHH
Q 007755 534 VGGLIMAG 541 (591)
Q Consensus 534 ~~~~~~~~ 541 (591)
+|++++.+
T Consensus 21 igGLifA~ 28 (74)
T 2zxe_G 21 VVGLIVAA 28 (74)
T ss_dssp HHHHHHHH
T ss_pred eccchhHH
Confidence 33334333
Done!