Query 007756
Match_columns 590
No_of_seqs 207 out of 1069
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 09:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007756.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007756hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zhxa1 d.338.1.1 (A:2-434) Ox 100.0 3.9E-81 2.9E-85 673.6 27.7 320 212-554 5-366 (433)
2 d2qqra2 b.34.9.1 (A:956-1011) 11.8 70 0.0051 23.0 2.7 14 296-309 2-15 (56)
3 d1k94a_ a.39.1.8 (A:) Grancalc 11.2 1.4E+02 0.01 24.8 5.2 44 24-67 12-71 (165)
4 d1k1va_ a.37.1.1 (A:) Mafg {Mo 8.6 1.5E+02 0.011 19.8 3.3 18 26-45 7-24 (41)
5 d1nh2b_ a.32.1.1 (B:) Large ch 8.3 1.3E+02 0.0094 20.6 3.0 23 31-53 17-39 (46)
6 d1nvpb_ a.32.1.1 (B:) Large ch 8.1 1.6E+02 0.012 19.8 3.4 23 31-53 15-37 (43)
7 d1wu9a1 a.245.1.1 (A:191-249) 8.1 2.5E+02 0.018 20.0 4.6 33 53-85 5-37 (59)
8 d1zela1 a.4.5.83 (A:1-82) Hypo 7.4 2E+02 0.015 20.8 3.9 28 26-53 28-58 (82)
9 d2fs2a1 d.38.1.5 (A:1-131) Phe 7.3 1.8E+02 0.013 22.9 4.2 25 415-439 104-128 (131)
10 d1k78a2 a.4.1.5 (A:82-142) Pax 7.2 85 0.0062 22.9 1.6 14 31-44 31-44 (61)
No 1
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.9e-81 Score=673.56 Aligned_cols=320 Identities=22% Similarity=0.344 Sum_probs=268.9
Q ss_pred cchhHH-HHhh--hcCCCCccccccccccCCcChHHHHHhhccchHHHHHHHhcCC-------------CCCHHHHHHHH
Q 007756 212 GVSLWA-MIKD--NIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGK-------------RGNTLMRILNV 275 (590)
Q Consensus 212 ~vsLws-ilK~--~iGkDLtrIsLPv~f~EP~S~LQr~~edleYs~LLd~Aa~~~~-------------~~dp~eRm~~V 275 (590)
+.|+|+ +||. .+|+|||+|+|||+||||+|+|||++++|+|++||+.|+.+.. ..||++||++|
T Consensus 5 ~~s~w~~flk~i~s~~~DLs~is~P~~i~eP~S~Le~~a~~~ey~~Ll~~aa~~~d~~~~~~~~~~~~~e~~p~eRm~~V 84 (433)
T d1zhxa1 5 SSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAV 84 (433)
T ss_dssp TSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHHH
T ss_pred cccHHHHHHHHHhhcCCccceeeeCceecccccHHHHHHHHHhhHHHHHHHhhcccccccccccccccccCCHHHHHHHH
Confidence 578895 5554 2588999999999999999999999999999999999987522 34599999999
Q ss_pred HHHHhhcccc-------ccCccCCCCCCCCCCeeEEEecCC------CEEEEEEecccCCcceeEEEecC--cEEEEEEe
Q 007756 276 AAFAVSGYAS-------TEGRICKPFNPLLGETYEADYPDK------GLQFFSEKVSHHPMIVACHCQGT--GWKFWGDS 340 (590)
Q Consensus 276 ~aFavS~y~~-------t~~r~~KPFNPiLGETfe~~~~d~------g~rfiaEQVSHHPPISA~~~eg~--g~~~~g~~ 340 (590)
++|+||+|++ +.++.+|||||||||||+|.|+|+ +++|||||||||||||||||+++ ||.++|+.
T Consensus 85 ~~f~lS~~~~~~~~~~~~~~~~kKPfNPiLGETfe~~~~d~~~~~~~~~~~iaEQVSHHPPIsA~~~~~~~~~~~~~g~~ 164 (433)
T d1zhxa1 85 TKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYN 164 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHhhhhhcccccccccccCCCCCcccceEEEEEecCCCCcCCcEEEEEeCCCCCCcceeEEEEcCCCCEEEEEEe
Confidence 9999999975 357889999999999999999874 58999999999999999999874 79999999
Q ss_pred eeeEEEEeeEEEEEEce--EEEEEecCCceEEecccceeeeecccceeeEeeceeEEEEcCCcceEEEEeeecccccCCC
Q 007756 341 NLKSKFWGRSIQLDPVG--VLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNP 418 (590)
Q Consensus 341 ~~ksKF~G~Si~v~~~G--~~~l~f~~gE~Y~w~~pt~~i~nii~G~~~~e~~G~m~I~~~tg~~~~l~Fk~~~~~~~~~ 418 (590)
.++++|+| ++.|.+.| .++|++ .+|+|.|++|+++|+|||+|++|+|++|+|.|+|+||+.|+|+|+++|||+++.
T Consensus 165 ~~~~~f~~-s~~i~~~g~~~~~l~~-~~E~Y~~~~P~~~i~gii~G~~~vE~~G~~~I~~~tg~~a~i~f~~kg~fsg~~ 242 (433)
T d1zhxa1 165 QIKASFTK-SLMLTVKQFGHTMLDI-KDESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK 242 (433)
T ss_dssp EEEEEECT-TCCEEEEEECCEEEEE-TTEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred eeeeeecc-eEEEEEcceEEEEEEe-cCcEEEEecCCEEEEEEEcCCceEEecceEEEEeCCCCEEEEEEcCCCccCCCc
Confidence 99999965 44555555 455554 579999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCC------cEEEEEeeeecceEEEEecccCCCCcccccCccceEEeccCCCCCCCCccccccceeecccC
Q 007756 419 HQVHGIVQDRNG------KTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEV 492 (590)
Q Consensus 419 ~~V~G~V~d~~g------k~~~~l~GkWd~~l~~~~~~~~~k~k~~~~~~~~~~lW~~~~~p~~~~~y~~t~fai~LNel 492 (590)
|.|+|.|++.+| +.+++|.|+|++.+.++..... ....++|+.++.+ +.+|++
T Consensus 243 ~~v~g~I~~~~~~~~~~~~~l~~i~G~W~~~~~~~~~~~~---------~~~~~~~d~~~~~------------~~~~~~ 301 (433)
T d1zhxa1 243 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIP------------AEHLNV 301 (433)
T ss_dssp SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSC------------CCCCBC
T ss_pred ceEEEEEEeCCCCCccccceeEEEecccCceEEEEeCCCC---------CcceEEEeCCcCC------------cccccC
Confidence 999999998665 4689999999999998754321 2346777776543 344555
Q ss_pred CccccCCCCCCCCCchhhhhHHHcCCHHHHHHHHHHHHHHHHHHHHhcc---CCCCCceeEEcCC
Q 007756 493 TPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE---NGWKPRWFAKDRA 554 (590)
Q Consensus 493 ~p~~~e~l~PTDSRlRpD~raLe~Gd~d~A~~eK~rLEekQR~~RK~re---~~w~PrwF~~~~~ 554 (590)
.|.....++|||+|+|||+|||++||++.|+++|.+|||+||++||+|+ ..|+||||+++.+
T Consensus 302 ~p~e~~~p~eS~~~wr~d~~ale~Gd~d~A~~eK~~LEe~QR~~Rk~re~~g~~w~Pr~F~~~~~ 366 (433)
T d1zhxa1 302 KPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY 366 (433)
T ss_dssp CCGGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred CCcccCCCCCCccccHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcEeccCC
Confidence 5532223344555589999999999999999999999999999998765 4699999998753
No 2
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.80 E-value=70 Score=22.96 Aligned_cols=14 Identities=29% Similarity=0.525 Sum_probs=12.7
Q ss_pred CCCCCeeEEEecCC
Q 007756 296 PLLGETYEADYPDK 309 (590)
Q Consensus 296 PiLGETfe~~~~d~ 309 (590)
|..||+-+..|+|+
T Consensus 2 P~~Ge~V~VrW~DG 15 (56)
T d2qqra2 2 PAEGEVVQVRWTDG 15 (56)
T ss_dssp CCTTCEEEEECTTS
T ss_pred CCCCcEEEEEcCCC
Confidence 88999999999994
No 3
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.24 E-value=1.4e+02 Score=24.82 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=33.8
Q ss_pred CCceeehHHHHHHHHHcCcChH----HHHHHHHHHH------------hhhHHHHHHHHH
Q 007756 24 DSIQVSTEKLRQLLSEEGVREE----VIQESEQIMR------------NEFAPLQSQLLL 67 (590)
Q Consensus 24 ~~~~~st~~lr~rl~~eg~~e~----~i~~ce~i~~------------~ef~~~~~q~~~ 67 (590)
.+-.||.+-|+.-|...|.... -+..|.+||. .||..+..+++.
T Consensus 12 ~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~ 71 (165)
T d1k94a_ 12 QDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA 71 (165)
T ss_dssp GGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccch
Confidence 4788999999999999998653 3577888886 788776655543
No 4
>d1k1va_ a.37.1.1 (A:) Mafg {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.62 E-value=1.5e+02 Score=19.81 Aligned_cols=18 Identities=33% Similarity=0.564 Sum_probs=14.3
Q ss_pred ceeehHHHHHHHHHcCcChH
Q 007756 26 IQVSTEKLRQLLSEEGVREE 45 (590)
Q Consensus 26 ~~~st~~lr~rl~~eg~~e~ 45 (590)
+++|+--|..+|. |++.+
T Consensus 7 ~~~svReLN~~Lr--gl~ke 24 (41)
T d1k1va_ 7 VTMSVRELNQHLR--GLSKE 24 (41)
T ss_dssp HHSCHHHHHHHHT--TSCHH
T ss_pred hhCcHHHHHHHHc--CCCHH
Confidence 6788888988885 88854
No 5
>d1nh2b_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.30 E-value=1.3e+02 Score=20.62 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=19.2
Q ss_pred HHHHHHHHHcCcChHHHHHHHHH
Q 007756 31 EKLRQLLSEEGVREEVIQESEQI 53 (590)
Q Consensus 31 ~~lr~rl~~eg~~e~~i~~ce~i 53 (590)
...|.-..++||.|.+++|-.++
T Consensus 17 ~~vR~dF~~~Gvde~vL~eLk~~ 39 (46)
T d1nh2b_ 17 NEVREDFENAGIDEQTLQDLKNI 39 (46)
T ss_dssp HHTHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHHH
Confidence 45688899999999999887665
No 6
>d1nvpb_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.09 E-value=1.6e+02 Score=19.81 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCcChHHHHHHHHH
Q 007756 31 EKLRQLLSEEGVREEVIQESEQI 53 (590)
Q Consensus 31 ~~lr~rl~~eg~~e~~i~~ce~i 53 (590)
+..|+-..++||.|.+++|--++
T Consensus 15 ~~vR~~F~~~GvDe~vL~eLk~~ 37 (43)
T d1nvpb_ 15 NDVRDIFLDDGVDEQVLMELKTL 37 (43)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHHH
Confidence 56788899999999998875544
No 7
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.08 E-value=2.5e+02 Score=20.03 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=28.3
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 007756 53 IMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETE 85 (590)
Q Consensus 53 i~~~ef~~~~~q~~~~~~~~~~l~~~lr~le~~ 85 (590)
.|..|..+|+..+.-+..+|=.-++.||..|.-
T Consensus 5 ~L~~ei~elk~~v~~lEkERdFYF~KLRdIEil 37 (59)
T d1wu9a1 5 ELMQQVNVLKLTVEDLEKERDFYFGKLRNIELI 37 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788889999999999999999999998853
No 8
>d1zela1 a.4.5.83 (A:1-82) Hypothetical protein Rv2827c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=7.37 E-value=2e+02 Score=20.85 Aligned_cols=28 Identities=36% Similarity=0.516 Sum_probs=21.6
Q ss_pred ceeehHHHHHHHHHcCcCh---HHHHHHHHH
Q 007756 26 IQVSTEKLRQLLSEEGVRE---EVIQESEQI 53 (590)
Q Consensus 26 ~~~st~~lr~rl~~eg~~e---~~i~~ce~i 53 (590)
+.|..|.|-|||-|.|.+- ++|++--.|
T Consensus 28 vvvtkedltqrlteagcgrdpdsairelrri 58 (82)
T d1zela1 28 VVVTKEDLTQRLTEAGCGRDPDSAIRELRRI 58 (82)
T ss_dssp SSEEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred eEEeHHHHHHHHHhcccCCCchHHHHHHHHh
Confidence 7889999999999999874 556554433
No 9
>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]}
Probab=7.32 E-value=1.8e+02 Score=22.94 Aligned_cols=25 Identities=24% Similarity=0.223 Sum_probs=18.8
Q ss_pred cCCCeEEEEEEEcCCCcEEEEEeee
Q 007756 415 DRNPHQVHGIVQDRNGKTVATLFGK 439 (590)
Q Consensus 415 ~~~~~~V~G~V~d~~gk~~~~l~Gk 439 (590)
|++...+++.|+|.+|+.+++..|.
T Consensus 104 gr~~~~~~~~v~~~~g~lvA~~~Gt 128 (131)
T d2fs2a1 104 GKQTGVYDIEIVNQQQKTVALFRGK 128 (131)
T ss_dssp CSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEEEeCCCCEEEEEEEE
Confidence 3445568888888888888887775
No 10
>d1k78a2 a.4.1.5 (A:82-142) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.16 E-value=85 Score=22.87 Aligned_cols=14 Identities=29% Similarity=0.276 Sum_probs=11.7
Q ss_pred HHHHHHHHHcCcCh
Q 007756 31 EKLRQLLSEEGVRE 44 (590)
Q Consensus 31 ~~lr~rl~~eg~~e 44 (590)
=-+|+||++||+..
T Consensus 31 WEIRd~Li~egiC~ 44 (61)
T d1k78a2 31 WEIRDRLLAERVCD 44 (61)
T ss_dssp HHHHHHHHHTTSSC
T ss_pred HHHHHHHHHcCCCC
Confidence 35899999999974
Done!