Query 007758
Match_columns 590
No_of_seqs 682 out of 4232
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:46:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 9.5E-34 3.2E-38 282.8 18.3 215 140-365 11-248 (253)
2 2f8y_A Notch homolog 1, transl 100.0 9.1E-33 3.1E-37 269.1 21.8 207 150-367 2-218 (223)
3 1n11_A Ankyrin; clathrin, BAND 100.0 7E-33 2.4E-37 298.1 22.8 283 139-440 14-319 (437)
4 4b93_B Ankyrin repeat domain-c 100.0 2.4E-34 8.3E-39 290.9 10.3 202 140-352 12-230 (269)
5 2fo1_E LIN-12 protein; beta-ba 100.0 2E-33 6.9E-38 297.2 17.1 218 138-365 124-371 (373)
6 1wdy_A 2-5A-dependent ribonucl 100.0 9.2E-33 3.2E-37 277.6 20.4 221 140-368 40-281 (285)
7 1k1a_A B-cell lymphoma 3-encod 100.0 9.3E-34 3.2E-38 279.0 12.7 218 140-364 10-240 (241)
8 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-32 4.8E-37 276.3 20.9 218 140-367 6-247 (285)
9 2xai_A ASB-9, ankyrin repeat a 100.0 3.9E-33 1.3E-37 279.8 16.3 213 141-368 5-225 (261)
10 3b7b_A Euchromatic histone-lys 100.0 7.7E-33 2.6E-37 272.2 16.7 210 140-360 12-230 (237)
11 3aji_A 26S proteasome non-ATPa 100.0 6.5E-33 2.2E-37 271.7 15.7 214 141-365 8-230 (231)
12 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-32 9.7E-37 282.8 21.2 219 138-367 23-307 (351)
13 1n11_A Ankyrin; clathrin, BAND 100.0 1.9E-32 6.4E-37 294.8 20.5 280 141-439 49-351 (437)
14 3ljn_A Hypothetical protein; a 100.0 4.1E-33 1.4E-37 292.9 14.9 219 139-366 20-270 (364)
15 1oy3_D Transcription factor in 100.0 7.7E-33 2.6E-37 278.7 16.0 205 140-351 10-269 (282)
16 1oy3_D Transcription factor in 100.0 4.7E-32 1.6E-36 272.9 19.5 191 166-367 3-252 (282)
17 3d9h_A CDNA FLJ77766, highly s 100.0 1.8E-32 6.1E-37 279.0 15.1 211 140-365 60-279 (285)
18 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-31 4.1E-36 272.9 20.9 215 139-367 15-249 (285)
19 4g8k_A 2-5A-dependent ribonucl 100.0 9.5E-32 3.3E-36 279.4 20.1 266 140-425 26-329 (337)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 8.1E-32 2.8E-36 268.8 16.9 194 163-367 1-217 (253)
21 2xai_A ASB-9, ankyrin repeat a 100.0 3E-31 1E-35 266.1 18.6 184 174-367 3-193 (261)
22 2dzn_A Probable 26S proteasome 100.0 8.9E-32 3.1E-36 262.8 13.9 200 141-350 4-218 (228)
23 3eu9_A Huntingtin-interacting 100.0 3E-31 1E-35 260.0 17.0 217 139-366 9-236 (240)
24 3b7b_A Euchromatic histone-lys 100.0 1.2E-30 4.2E-35 256.4 21.4 193 164-367 3-204 (237)
25 2rfa_A Transient receptor pote 100.0 8.8E-31 3E-35 256.9 18.0 184 174-366 3-223 (232)
26 1s70_B 130 kDa myosin-binding 100.0 6.5E-32 2.2E-36 275.1 10.2 200 140-350 41-275 (299)
27 3utm_A Tankyrase-1; tankyrase, 100.0 8.4E-31 2.9E-35 271.7 18.7 214 139-364 58-333 (351)
28 4g8k_A 2-5A-dependent ribonucl 100.0 2.6E-30 8.9E-35 268.6 21.7 222 139-368 59-301 (337)
29 4b93_B Ankyrin repeat domain-c 100.0 9.3E-31 3.2E-35 264.5 16.9 185 175-367 12-212 (269)
30 2fo1_E LIN-12 protein; beta-ba 100.0 1.4E-30 4.9E-35 275.3 18.4 215 140-367 95-340 (373)
31 1k1a_A B-cell lymphoma 3-encod 100.0 4.9E-30 1.7E-34 252.3 20.6 190 167-367 4-210 (241)
32 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-31 8.8E-36 261.8 11.3 186 173-367 7-211 (236)
33 3hra_A Ankyrin repeat family p 100.0 4E-30 1.4E-34 246.3 19.1 182 174-363 5-201 (201)
34 4gpm_A Engineered protein OR26 100.0 4E-30 1.4E-34 241.7 17.2 155 205-368 6-164 (169)
35 3kea_A K1L; tropism, ANK repea 100.0 5.9E-31 2E-35 267.9 12.0 206 141-366 33-247 (285)
36 3kea_A K1L; tropism, ANK repea 100.0 6.8E-31 2.3E-35 267.4 12.3 203 150-368 11-223 (285)
37 2etb_A Transient receptor pote 100.0 9.2E-31 3.2E-35 261.1 12.7 187 174-366 2-247 (256)
38 2dzn_A Probable 26S proteasome 100.0 2.1E-29 7.2E-34 245.9 20.3 188 174-367 2-202 (228)
39 3aji_A 26S proteasome non-ATPa 100.0 7.5E-29 2.6E-33 242.7 21.1 185 174-367 6-199 (231)
40 3ljn_A Hypothetical protein; a 100.0 6.1E-30 2.1E-34 268.6 14.2 224 163-425 11-272 (364)
41 4gpm_A Engineered protein OR26 100.0 3E-29 1E-33 235.7 16.2 152 175-335 5-164 (169)
42 1s70_B 130 kDa myosin-binding 100.0 2.2E-29 7.4E-34 256.3 14.9 186 174-367 40-259 (299)
43 2pnn_A Transient receptor pote 100.0 1.6E-29 5.4E-34 254.7 12.9 195 163-366 4-260 (273)
44 1sw6_A Regulatory protein SWI6 100.0 5E-30 1.7E-34 266.3 6.3 192 142-351 100-327 (327)
45 1ikn_D Protein (I-kappa-B-alph 100.0 2.9E-29 9.8E-34 247.1 10.0 199 141-350 10-229 (236)
46 3jxi_A Vanilloid receptor-rela 100.0 1.1E-28 3.7E-33 246.4 14.0 183 175-366 6-251 (260)
47 2rfm_A Putative ankyrin repeat 100.0 3.1E-28 1.1E-32 232.1 15.1 159 196-363 28-190 (192)
48 2f8y_A Notch homolog 1, transl 100.0 9.5E-28 3.3E-32 233.5 16.3 185 139-334 25-218 (223)
49 4hbd_A KN motif and ankyrin re 100.0 2.6E-28 8.8E-33 247.3 12.6 181 175-364 77-274 (276)
50 3hra_A Ankyrin repeat family p 100.0 7.4E-28 2.5E-32 230.4 14.9 182 139-330 5-201 (201)
51 2rfa_A Transient receptor pote 99.9 6.9E-28 2.4E-32 236.2 13.6 190 140-337 4-227 (232)
52 3v31_A Ankyrin repeat family A 99.9 3.5E-27 1.2E-31 219.5 16.6 155 202-365 2-160 (167)
53 3eu9_A Huntingtin-interacting 99.9 4.2E-27 1.4E-31 230.4 17.7 186 174-367 9-204 (240)
54 2etb_A Transient receptor pote 99.9 6.6E-28 2.3E-32 240.3 11.5 188 139-334 2-248 (256)
55 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.1E-27 2.1E-31 218.8 16.2 154 201-363 12-169 (169)
56 1ihb_A P18-INK4C(INK6), cyclin 99.9 4E-27 1.4E-31 217.6 13.8 153 203-365 5-162 (162)
57 1sw6_A Regulatory protein SWI6 99.9 9.7E-28 3.3E-32 249.1 10.4 202 151-367 31-310 (327)
58 2pnn_A Transient receptor pote 99.9 2.4E-27 8.3E-32 238.7 12.5 201 139-345 13-272 (273)
59 3v30_A DNA-binding protein rfx 99.9 9.9E-27 3.4E-31 217.5 15.2 156 203-367 2-162 (172)
60 3twr_A Tankyrase-2; ankyrin re 99.9 5.7E-27 2E-31 217.6 11.6 156 200-364 5-164 (165)
61 3f6q_A Integrin-linked protein 99.9 1.2E-26 4E-31 218.8 13.0 160 201-368 3-166 (179)
62 1awc_B Protein (GA binding pro 99.9 3.1E-26 1E-30 210.2 14.6 146 204-359 3-152 (153)
63 3v30_A DNA-binding protein rfx 99.9 2.3E-26 7.8E-31 215.0 12.4 160 175-343 3-171 (172)
64 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-25 3.6E-30 208.0 16.6 149 174-332 5-162 (162)
65 3jxi_A Vanilloid receptor-rela 99.9 1E-26 3.4E-31 232.1 10.4 191 138-334 4-252 (260)
66 1bd8_A P19INK4D CDK4/6 inhibit 99.9 9.8E-26 3.4E-30 207.0 14.3 150 203-362 2-155 (156)
67 1d9s_A Cyclin-dependent kinase 99.9 5.9E-26 2E-30 204.4 12.5 130 231-365 2-136 (136)
68 2rfm_A Putative ankyrin repeat 99.9 1.3E-25 4.4E-30 213.9 14.0 155 165-330 28-190 (192)
69 3v31_A Ankyrin repeat family A 99.9 2E-25 7E-30 207.5 12.4 153 173-334 2-162 (167)
70 4hbd_A KN motif and ankyrin re 99.9 1.1E-25 3.7E-30 228.0 11.2 177 144-330 81-273 (276)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-25 3.7E-30 222.8 10.2 157 201-367 3-166 (239)
72 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-24 4.1E-29 203.1 16.1 148 174-330 14-169 (169)
73 2vge_A RELA-associated inhibit 99.9 4.6E-28 1.6E-32 238.8 -7.8 191 156-358 2-206 (229)
74 3f6q_A Integrin-linked protein 99.9 9E-25 3.1E-29 205.8 11.9 158 174-340 5-171 (179)
75 2jab_A H10-2-G3; HER2, darpin, 99.9 3.9E-24 1.3E-28 192.4 14.5 121 242-363 12-136 (136)
76 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.7E-26 2.6E-30 223.8 2.8 169 174-352 5-193 (239)
77 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-23 4.3E-28 184.8 15.6 122 243-365 1-126 (126)
78 1awc_B Protein (GA binding pro 99.9 6.7E-24 2.3E-28 194.6 14.2 143 174-326 2-152 (153)
79 3c5r_A BARD-1, BRCA1-associate 99.9 8.1E-25 2.8E-29 196.9 7.9 129 231-364 1-133 (137)
80 2vge_A RELA-associated inhibit 99.9 1.3E-24 4.4E-29 214.1 9.0 182 230-440 7-196 (229)
81 1bi7_B P16INK4A, MTS1, multipl 99.9 1.9E-24 6.3E-29 199.2 8.8 137 199-345 8-149 (156)
82 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.2E-23 7.5E-28 191.3 15.8 144 175-329 3-155 (156)
83 3t8k_A Uncharacterized protein 99.9 1.5E-24 5.3E-29 206.7 7.2 151 203-363 6-177 (186)
84 1d9s_A Cyclin-dependent kinase 99.9 3.7E-24 1.3E-28 192.6 8.9 130 193-332 2-136 (136)
85 1bi7_B P16INK4A, MTS1, multipl 99.9 5E-24 1.7E-28 196.4 10.0 125 241-367 9-138 (156)
86 3twr_A Tankyrase-2; ankyrin re 99.9 8.2E-24 2.8E-28 196.2 11.1 148 174-331 8-164 (165)
87 3aaa_C Myotrophin, protein V-1 99.9 5.2E-23 1.8E-27 181.5 9.8 107 242-349 5-115 (123)
88 3ehr_A Osteoclast-stimulating 99.9 1.2E-22 4E-27 198.1 8.6 127 241-367 70-200 (222)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.1E-22 3.1E-26 172.8 12.4 122 202-332 1-126 (126)
90 3t8k_A Uncharacterized protein 99.9 7.6E-23 2.6E-27 195.0 4.6 153 175-337 7-184 (186)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-21 3.7E-26 176.3 11.5 121 201-330 12-136 (136)
92 3deo_A Signal recognition part 99.9 8.1E-22 2.8E-26 186.6 11.0 111 241-353 41-156 (183)
93 2aja_A Ankyrin repeat family p 99.9 9.5E-24 3.3E-28 223.0 -4.9 206 141-363 94-342 (376)
94 3ui2_A Signal recognition part 99.8 1.4E-21 4.9E-26 193.9 10.3 128 242-378 43-178 (244)
95 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.6E-21 2.3E-25 159.6 12.4 92 272-364 1-92 (93)
96 3c5r_A BARD-1, BRCA1-associate 99.8 6.1E-22 2.1E-26 177.9 4.5 130 193-332 1-134 (137)
97 2b0o_E UPLC1; arfgap, structur 99.8 1.4E-21 4.7E-26 200.6 7.8 135 204-353 152-299 (301)
98 1dcq_A PYK2-associated protein 99.8 1.6E-20 5.5E-25 190.3 15.3 123 243-366 129-264 (278)
99 2aja_A Ankyrin repeat family p 99.8 4.4E-23 1.5E-27 217.9 -4.0 193 150-366 45-251 (376)
100 3ehr_A Osteoclast-stimulating 99.8 2E-21 7E-26 189.3 5.7 134 199-341 69-207 (222)
101 3lvq_E ARF-GAP with SH3 domain 99.8 2.9E-20 9.8E-25 203.9 15.2 125 244-369 132-269 (497)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.2E-20 1.4E-24 154.6 12.0 89 243-332 1-93 (93)
103 2b0o_E UPLC1; arfgap, structur 99.8 7.1E-20 2.4E-24 187.7 14.2 121 243-364 150-283 (301)
104 3jue_A Arfgap with coiled-coil 99.8 5.7E-20 2E-24 193.5 13.6 121 243-364 198-325 (368)
105 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-20 4.9E-25 163.6 7.1 103 241-344 6-112 (115)
106 3aaa_C Myotrophin, protein V-1 99.8 6.6E-20 2.3E-24 161.5 7.2 113 200-321 4-120 (123)
107 3jue_A Arfgap with coiled-coil 99.8 1.9E-19 6.4E-24 189.5 11.7 146 199-351 195-348 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.8 1.5E-19 5.2E-24 198.1 11.4 134 205-350 134-277 (497)
109 3deo_A Signal recognition part 99.8 2.8E-19 9.7E-24 169.0 8.6 135 201-362 42-181 (183)
110 3ui2_A Signal recognition part 99.8 3.1E-19 1.1E-23 177.0 8.1 138 201-365 43-185 (244)
111 2l6b_A NR1C; ankyrin, consensu 99.8 6.1E-19 2.1E-23 153.3 7.9 99 269-368 5-103 (115)
112 1dcq_A PYK2-associated protein 99.8 2.5E-18 8.4E-23 174.2 12.2 123 205-333 132-264 (278)
113 2zgd_A 3 repeat synthetic anky 99.8 3.3E-18 1.1E-22 147.9 10.7 91 268-359 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.5E-16 5.2E-21 137.4 10.2 86 240-326 20-109 (110)
115 3b84_A Zinc finger and BTB dom 99.5 9E-15 3.1E-19 128.6 7.0 92 37-161 22-113 (119)
116 1r29_A B-cell lymphoma 6 prote 99.5 1.3E-14 4.5E-19 128.9 7.6 95 36-160 26-121 (127)
117 2if5_A Zinc finger and BTB dom 99.5 9.4E-15 3.2E-19 128.5 6.2 94 37-159 23-116 (120)
118 2vkp_A BTB/POZ domain-containi 99.5 1.3E-14 4.3E-19 125.4 6.8 95 36-160 5-103 (109)
119 1buo_A POZ domain, protein (pr 99.5 6.7E-15 2.3E-19 129.8 4.7 90 37-160 26-115 (121)
120 2yy9_A Zinc finger and BTB dom 99.5 1.4E-14 4.7E-19 130.3 6.5 94 36-162 22-115 (135)
121 2vpk_A Myoneurin; transcriptio 99.5 2.1E-14 7.2E-19 125.5 7.3 93 37-160 20-112 (116)
122 2q81_A MIZ-1 protein; BTB/POZ 99.5 1.1E-14 3.9E-19 127.9 5.6 89 37-159 25-113 (119)
123 2ppi_A Gigaxonin; BTB domain, 99.5 1.5E-14 5.3E-19 131.5 6.6 98 36-160 44-141 (144)
124 2z8h_A Transcription regulator 99.5 2.5E-14 8.6E-19 129.1 7.5 95 37-162 34-129 (138)
125 2ihc_A Transcription regulator 99.5 1.8E-14 6.2E-19 127.6 6.3 94 37-161 27-121 (124)
126 3ohu_A Transcription regulator 99.5 2.6E-14 8.8E-19 126.7 6.9 94 36-160 29-123 (125)
127 3htm_A Speckle-type POZ protei 99.5 2.6E-14 9E-19 133.6 6.4 130 37-198 32-161 (172)
128 3ga1_A Nucleus accumbens-assoc 99.5 4E-14 1.4E-18 126.2 7.1 94 36-162 30-124 (129)
129 3fkc_A Transcriptional regulat 99.5 3E-14 1E-18 124.6 5.1 86 37-155 29-114 (116)
130 3hve_A Gigaxonin; ubiquitin, c 99.4 9.5E-14 3.3E-18 138.6 8.3 132 35-196 27-158 (256)
131 4eoz_A Speckle-type POZ protei 99.4 5.8E-14 2E-18 127.5 5.2 121 37-189 23-143 (145)
132 3i3n_A Kelch-like protein 11; 99.4 9E-14 3.1E-18 140.7 2.7 134 37-196 30-166 (279)
133 3m5b_A Zinc finger and BTB dom 99.4 1.4E-13 4.8E-18 120.9 3.1 88 36-161 27-114 (119)
134 3hqi_A Speckle-type POZ protei 99.4 3.1E-13 1.1E-17 138.9 5.5 131 36-198 171-301 (312)
135 2ast_A S-phase kinase-associat 97.9 1.1E-05 3.8E-10 74.0 5.2 113 42-163 3-123 (159)
136 4ajy_C Transcription elongatio 97.8 6.6E-05 2.2E-09 62.7 8.2 59 42-108 4-63 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 96.8 0.00096 3.3E-08 59.6 4.7 109 42-164 4-119 (141)
138 2p1m_A SKP1-like protein 1A; F 95.6 0.00077 2.6E-08 61.6 -2.7 60 42-114 6-66 (160)
139 3drz_A BTB/POZ domain-containi 94.2 0.058 2E-06 45.4 5.3 93 42-160 8-102 (107)
140 1hv2_A Elongin C, ELC1; protei 93.4 0.15 5.1E-06 42.3 6.4 58 42-110 6-64 (99)
141 2fnj_C Transcription elongatio 93.1 0.12 4.2E-06 42.5 5.3 61 42-110 3-64 (96)
142 3v7d_A Suppressor of kinetocho 86.1 1.1 3.6E-05 40.9 5.9 109 42-160 9-127 (169)
143 3drx_A BTB/POZ domain-containi 82.2 2.1 7.1E-05 40.0 6.0 96 41-162 13-110 (202)
144 1vcb_B Protein (elongin C); tu 78.0 2.8 9.6E-05 35.3 5.1 61 42-110 19-80 (112)
145 3kvt_A Potassium channel prote 61.6 16 0.00056 30.6 6.2 85 42-154 7-92 (115)
146 1t1d_A Protein (potassium chan 43.4 31 0.0011 28.1 4.9 65 42-115 3-69 (100)
147 1nn7_A Potassium channel KV4.2 43.3 45 0.0015 27.3 5.9 86 42-155 2-87 (105)
148 1s1g_A Potassium voltage-gated 41.9 45 0.0015 28.3 5.9 86 42-155 15-100 (124)
149 2nz0_B Potassium voltage-gated 33.9 65 0.0022 27.9 5.7 87 41-155 36-122 (140)
150 4a1q_A ORF E73; viral protein, 33.8 9.2 0.00032 27.6 0.1 12 473-484 61-72 (73)
151 1etf_B REV peptide; complex (R 24.8 75 0.0026 19.1 3.0 22 521-542 1-22 (26)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.5e-34 Score=282.81 Aligned_cols=215 Identities=17% Similarity=0.117 Sum_probs=168.0
Q ss_pred hHHHHHHHhcC-------------Cceeeeeccccccccccc-CCCCCCchHHHHHHHcCcH----HHHhcccccccccC
Q 007758 140 VELIYACAAFQ-------------ITELVSYFQCLLLILAEN-APVEDVIPILVAALHCQLN----RLHSCCIQRIARSN 201 (590)
Q Consensus 140 lelL~~A~~~~-------------~~elv~~Ll~~g~din~~-~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~ 201 (590)
.++|++|+..| ..+++++|+++|.+++.. +..+ .||||+|+..|+. .|+++|++++.++.
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 88 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTG--ETALHLAARYSRSDAAKRLLEASADANIQDN 88 (253)
T ss_dssp -----------------------------------------CCCTTS--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCC--CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 46677777765 889999999999999754 4444 9999999999984 89999999999999
Q ss_pred CCccccccccCccchhHHHHHHhhhccccCC-CcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccH
Q 007758 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFA 276 (590)
Q Consensus 202 ~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Ga-din~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~Tp 276 (590)
.|.||||+|+..+ ...++++|++ +|+ +++..+. .|.||||+|+..|+.+++++|++.| ++ |..|+||
T Consensus 89 ~g~t~L~~A~~~~-~~~~v~~Ll~----~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 160 (253)
T 1yyh_A 89 MGRTPLHAAVSAD-AQGVFQILIR----NRATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA 160 (253)
T ss_dssp TSCCHHHHHHHHT-CHHHHHHHHH----STTSCTTCCCT---TCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBH
T ss_pred CCCCHHHHHHHcC-CHHHHHHHHH----cCCCCccccCC---CCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 9999999999988 5566666654 455 7888887 9999999999999999999999999 44 6789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhH
Q 007758 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (590)
Q Consensus 277 Lh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v 356 (590)
||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 161 L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 161 LHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCC
Q 007758 357 IEASKQGQE 365 (590)
Q Consensus 357 ~~l~~~G~~ 365 (590)
.++......
T Consensus 240 ~~l~~~~~~ 248 (253)
T 1yyh_A 240 RLLDLEHHH 248 (253)
T ss_dssp HHHHC----
T ss_pred HHHHHHhhh
Confidence 998876543
No 2
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=9.1e-33 Score=269.13 Aligned_cols=207 Identities=18% Similarity=0.122 Sum_probs=186.5
Q ss_pred CCceeeeeccccccccccc-CCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHh
Q 007758 150 QITELVSYFQCLLLILAEN-APVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRV 224 (590)
Q Consensus 150 ~~~elv~~Ll~~g~din~~-~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~ 224 (590)
|..+++++|+++|.+++.. +..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+ ..+++++|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTG--ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSAD-AQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCC--CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHH
Confidence 4678999999999999875 4444 9999999999984 889999999999999999999999998 556666665
Q ss_pred hhccccCC-CcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 007758 225 KSNQESEA-NIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLAD 299 (590)
Q Consensus 225 ~~~~~~Ga-din~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~ad 299 (590)
+ +|+ +++..+. .|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| ++
T Consensus 79 ~----~~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~ 150 (223)
T 2f8y_A 79 R----NRATDLDARMH---DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-AN 150 (223)
T ss_dssp H----BTTSCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CC
T ss_pred H----cCCCCcccCCC---CCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 4 454 7887777 9999999999999999999999999 43 678999999999999999999999998 99
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 300 LNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 300 vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.++++++.+.|+...
T Consensus 151 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 151 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998653
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7e-33 Score=298.14 Aligned_cols=283 Identities=16% Similarity=0.078 Sum_probs=232.3
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCcc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDE 214 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~ 214 (590)
..++|++|+..|..+++++|+++|++++..+..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKV--ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCC--CCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 3478999999999999999999999999877666 9999999999984 889999999999999999999999988
Q ss_pred chhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHH
Q 007758 215 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFK 290 (590)
Q Consensus 215 ~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~ 290 (590)
..+++++|++ +|++++..+. .|.||||+|+..|+.++|++|++.| + .+..|.||||+|+..|+.++++
T Consensus 92 -~~~~v~~Ll~----~ga~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 92 -HTNMVKLLLE----NNANPNLATT---AGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp -CHHHHHHHHH----HTCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred -CHHHHHHHHh----CCCCCCCCCC---CCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 5566666664 6999999888 9999999999999999999999998 3 3678999999999999999999
Q ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcchh-
Q 007758 291 EVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKD- 369 (590)
Q Consensus 291 ~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~~~- 369 (590)
+|++.| +++|..+..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+.++.+++.|..+...
T Consensus 164 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 242 (437)
T 1n11_A 164 LLLERD-AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES 242 (437)
T ss_dssp HHHHTT-CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHhCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 999998 999999999999999999999999999999999999999999999999999999999999999987655421
Q ss_pred ------------hchHHHHHHHHHhcccCcCcccccccCCchhhhHHHHHhc-cccc-eeecccchhhHHHhhcCCCccc
Q 007758 370 ------------WLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEK-KVAG-VWLFPSEAREAMEIAGADTATG 435 (590)
Q Consensus 370 ------------~~~~~~l~~~~~~~p~~~d~~~~~~~~~~~l~~~~~~le~-~v~~-~~l~~~ea~~~~~ia~~d~t~~ 435 (590)
....++++..+.. ..+.+.. ...|.+.+ +.+..+ ++.+ ++|+..++. ++.....|.+|
T Consensus 243 ~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~~-~~~g~t~L--~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~ 314 (437)
T 1n11_A 243 VQGVTPLHLAAQEGHAEMVALLLSK---QANGNLG-NKSGLTPL--HLVAQEGHVPVADVLIKHGVM--VDATTRMGYTP 314 (437)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCC-CTTCCCHH--HHHHHHTCHHHHHHHHHHTCC--TTCCCSSCCCH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhc---CCCCCCC-CCCCCCHH--HHHHHcCCHHHHHHHHhCCcc--CCCCCCCCCCH
Confidence 4556677664432 2222222 23344555 455555 7777 888876655 34445566677
Q ss_pred ccccc
Q 007758 436 LSALG 440 (590)
Q Consensus 436 l~~~~ 440 (590)
|..+.
T Consensus 315 L~~A~ 319 (437)
T 1n11_A 315 LHVAS 319 (437)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77663
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=290.86 Aligned_cols=202 Identities=22% Similarity=0.242 Sum_probs=163.4
Q ss_pred hHHHHHHHhcCCceeeeecccccccc--------cccCCCCCCchHHHHHHHcCc-----HHHHhcccccccccCCCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLIL--------AENAPVEDVIPILVAALHCQL-----NRLHSCCIQRIARSNLDNVC 206 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~di--------n~~~~~~~~~t~Lh~A~~~g~-----~~Ll~~g~di~~~d~~g~t~ 206 (590)
.+.|+.|+..|..+++++|++.+.+. +..+. .+.|||+.|+..+. ..|++.|+++|.+|..|.||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~--~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~Tp 89 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADP--EFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSP 89 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC------------------------------------------CCCCTTCCCTTSCCH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCc--cCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 47799999999999999999998653 33333 34899999998765 37899999999999999999
Q ss_pred cccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHH
Q 007758 207 LEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAA 282 (590)
Q Consensus 207 L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~ 282 (590)
||+|+..+ ...++++|++ .|++++..+. .|.||+|+|+..++.+++++|++.| ++ |..|+||||+||.
T Consensus 90 Lh~A~~~g-~~~~v~~Ll~----~~a~~~~~~~---~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 90 LHVAALHG-RADLIPLLLK----HGANAGARNA---DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp HHHHHHTT-CTTHHHHHHH----TTCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred HHHHHHcC-cHHHHHHHHh----cCCCcCccCC---CCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999 5566666663 6999999888 9999999999999999999999999 44 6789999999999
Q ss_pred cCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCC
Q 007758 283 YCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTR 352 (590)
Q Consensus 283 ~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~ 352 (590)
.|+.++|++||+.| +++|.+|..|+||||+|+..|+.++|++||++|||+|.+|.+|+||||+|+++++
T Consensus 162 ~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 162 GGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred CCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999998 9999999999999999999999999999999999999999999999999987664
No 5
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2e-33 Score=297.18 Aligned_cols=218 Identities=16% Similarity=0.123 Sum_probs=198.4
Q ss_pred hhhHHHHHHHhcCCceeeeecc--------cccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCcc
Q 007758 138 YAVELIYACAAFQITELVSYFQ--------CLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNV 205 (590)
Q Consensus 138 ~~lelL~~A~~~~~~elv~~Ll--------~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t 205 (590)
...++|++|+..+..+++++|+ +.|+++|.++..+ .||||+|+..|+. .|+++|++++.++..|.|
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g--~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDE--NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCC--CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 3457899999999999999887 7899999988766 9999999999984 899999999999999999
Q ss_pred ccccccCccchhHHHHHHhhhccccC---CCcCCCCcccccCCcHHHHHHhcC---CHHHHHHHHhCC-CCC--------
Q 007758 206 CLEKELPDEVSSEIKSLRVKSNQESE---ANIKEVDPMHEKRVRRIHKALDSD---DFELLNLLLNEY-EVT-------- 270 (590)
Q Consensus 206 ~L~~A~~~~~~~~i~~lL~~~~~~~G---adin~~d~~~~~g~t~Lh~A~~~g---~~~~v~~LL~~g-~id-------- 270 (590)
|||+|+..+ ...++++|++ +| ++++..|. .|.||||+|+..+ +.+++++|+++| +++
T Consensus 202 ~L~~A~~~g-~~~~v~~Ll~----~~~~~~~~~~~d~---~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 202 ALHQAAANR-DFGMMVYMLN----STKLKGDIEELDR---NGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp HHHHHHHTT-CHHHHHHHTT----SHHHHHTTSCCCT---TSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred HHHHHHHCC-CHHHHHHHHh----cCccccChhhcCC---CCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 999999999 5666666653 45 68888887 9999999999998 899999999999 554
Q ss_pred ---CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHH
Q 007758 271 ---LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAIC 347 (590)
Q Consensus 271 ---~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A 347 (590)
..|+||||+|+..|+.++|++|++.+++++|.+|..|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 47999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHcCChhhHHHHHhcCCC
Q 007758 348 RRMTRRKDYIEASKQGQE 365 (590)
Q Consensus 348 ~~~~~~~~v~~l~~~G~~ 365 (590)
+..|+.++++++++.|++
T Consensus 354 ~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 354 QANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHTTCHHHHHHHHTTC--
T ss_pred HHcCCHHHHHHHHhcCcc
Confidence 999999999999998864
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.2e-33 Score=277.65 Aligned_cols=221 Identities=17% Similarity=0.121 Sum_probs=201.2
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
.++|++|+..+..+++++|+++|++++.++..+ .||||+|+..++. .|+++|++++.++..|.||||+|+..+
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 116 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRHGADPVLRKKNG--ATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG- 116 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTT-
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhC-
Confidence 367999999999999999999999999887766 9999999999984 889999999999999999999999998
Q ss_pred hhHHHHHHhhhccccCCCcCCCCcc-------cccCCcHHHHHHhcCCHHHHHHHHhC-C-C---CCCCCccHHHHHHHc
Q 007758 216 SSEIKSLRVKSNQESEANIKEVDPM-------HEKRVRRIHKALDSDDFELLNLLLNE-Y-E---VTLDDAFALHYAAAY 283 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~Gadin~~d~~-------~~~g~t~Lh~A~~~g~~~~v~~LL~~-g-~---id~~G~TpLh~Aa~~ 283 (590)
..+++++|++ +|++++..+.. +..|.||||+|+..|+.+++++|++. | + .|..|+||||+|+..
T Consensus 117 ~~~~~~~Ll~----~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 117 KVKALKFLYK----RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp CHHHHHHHHH----TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC
T ss_pred CHHHHHHHHH----hCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 5555665553 68999887321 34899999999999999999999997 6 3 367899999999999
Q ss_pred CC----HHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCcCCCCCCcHHHHHHHcCChhhHHH
Q 007758 284 CN----PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLS-KGACASETTSDGRTAVAICRRMTRRKDYIE 358 (590)
Q Consensus 284 g~----~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~ 358 (590)
++ .+++++|++.| +++|.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+.+++++
T Consensus 193 ~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~ 271 (285)
T 1wdy_A 193 SDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271 (285)
T ss_dssp SCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHH
Confidence 99 99999999998 9999999999999999999999999999999 899999999999999999999999999999
Q ss_pred HHhcCCCcch
Q 007758 359 ASKQGQETNK 368 (590)
Q Consensus 359 l~~~G~~~~~ 368 (590)
+++.|+++..
T Consensus 272 Ll~~Ga~~~~ 281 (285)
T 1wdy_A 272 LCKRGASTDC 281 (285)
T ss_dssp HHHHSSCSCC
T ss_pred HHHcCCCCCc
Confidence 9999998753
No 7
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=9.3e-34 Score=278.97 Aligned_cols=218 Identities=15% Similarity=0.083 Sum_probs=187.6
Q ss_pred hHHHHHHHhcCCceeeeeccc----ccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCcccccccc
Q 007758 140 VELIYACAAFQITELVSYFQC----LLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKEL 211 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~----~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~ 211 (590)
.++|++|+..|..+++++|++ .+.+++.++..+ .||||+|+..++. .|+++|++++.++..|.||||+|+
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 87 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR--QTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccC--CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 467999999999999998886 788998877666 9999999999984 889999999999999999999999
Q ss_pred CccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---C-CCCccHHHHHHHcCCH
Q 007758 212 PDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAFALHYAAAYCNP 286 (590)
Q Consensus 212 ~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d-~~G~TpLh~Aa~~g~~ 286 (590)
..+ ...++++|++.....+.+++..+. .|.||||+|+..|+.+++++|++.| ++ + ..|.||||+|+..|+.
T Consensus 88 ~~~-~~~~~~~Ll~~~~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 88 EHR-SPTCLRALLDSAAPGTLDLEARNY---DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HTT-CHHHHHHHHHHSCTTSCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HcC-CHHHHHHHHHcCCCccccccccCc---CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 988 555566665442222237777777 9999999999999999999999999 44 3 6799999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 287 KVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 287 ~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.+.+.++
T Consensus 164 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 164 SMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 9999999998 9999999999999999999999999999999999999999999999999999999999888877654
No 8
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-32 Score=276.29 Aligned_cols=218 Identities=19% Similarity=0.080 Sum_probs=198.4
Q ss_pred hHHHHHHHhcCCceeeeeccccccccccc-CCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCcc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAEN-APVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDE 214 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~-~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~ 214 (590)
..+|+.|+..+..+++++|+++|.+++.+ +.. +.||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEG--GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTT--CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 46899999999999999999999999876 443 49999999999984 899999999999999999999999988
Q ss_pred chhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC-------------CCCCccHHHHH
Q 007758 215 VSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-------------TLDDAFALHYA 280 (590)
Q Consensus 215 ~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i-------------d~~G~TpLh~A 280 (590)
..+++++|++ +|++++..+. .|.||||+|+..|+.+++++|++.| ++ +..|.||||+|
T Consensus 84 -~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 84 -SVKLLKLFLS----KGADVNECDF---YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp -CHHHHHHHHH----TTCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred -CHHHHHHHHH----cCCCCCccCc---ccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 5556666653 6999999888 9999999999999999999999999 43 55689999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhH
Q 007758 281 AAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE----PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (590)
Q Consensus 281 a~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~----~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v 356 (590)
+..|+.+++++|++..+++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.+.+
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 999999999999998449999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHh-cCCCcc
Q 007758 357 IEASK-QGQETN 367 (590)
Q Consensus 357 ~~l~~-~G~~~~ 367 (590)
+.+++ .|.++.
T Consensus 236 ~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 236 QRLLEQEHIEIN 247 (285)
T ss_dssp HHHHHSSSCCTT
T ss_pred HHHHhccCCCcc
Confidence 99998 676553
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=279.84 Aligned_cols=213 Identities=15% Similarity=0.037 Sum_probs=191.6
Q ss_pred HHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccch
Q 007758 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVS 216 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~ 216 (590)
++|++|+..|..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+ .
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~ 81 (261)
T 2xai_A 5 SPMHEAAIHGHQLSLRNLISQGWAVNIITADH--VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG-S 81 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTC--CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-C
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-C
Confidence 57999999999999999999999999888766 9999999999984 899999999999999999999999998 5
Q ss_pred hHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHH
Q 007758 217 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEV 292 (590)
Q Consensus 217 ~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~L 292 (590)
.+++++|++ +|++++..+ .|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|
T Consensus 82 ~~~v~~Ll~----~g~~~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 82 WDCVNLLLQ----HGASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHHHHH----TTCCSSCSC----TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHH----CCCCCCCCC----CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 556666653 688887533 7999999999999999999999999 44 67899999999999999999999
Q ss_pred HHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcch
Q 007758 293 LNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNK 368 (590)
Q Consensus 293 L~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~~ 368 (590)
++.| +++|. |..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.. ...+..+++.+..+..
T Consensus 154 l~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~~~~ll~~~~~~~l 225 (261)
T 2xai_A 154 LESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLEREGPPSL 225 (261)
T ss_dssp HHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTHHHHHHHC-CCCCH
T ss_pred HHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccHHHHHHhccCCccH
Confidence 9998 99995 89999999999999999999999999999999999999999999954 4588888888776643
No 10
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.7e-33 Score=272.21 Aligned_cols=210 Identities=15% Similarity=0.140 Sum_probs=185.7
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
.++|++|+..|..+++++|+++|++++..+..+ .||||+|+..++. .|+++|++++.++..|.||||+|+..+
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 88 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ--RTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG- 88 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT-
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCC--CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-
Confidence 367999999999999999999999999877666 9999999999984 888999999999999999999999988
Q ss_pred hhHHHHHHhhhccccC-CCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHH
Q 007758 216 SSEIKSLRVKSNQESE-ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFK 290 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~G-adin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~ 290 (590)
..+++++|++ +| ++++..+. .|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++
T Consensus 89 ~~~~~~~Ll~----~~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 89 HYEVVQYLLS----NGQMDVNCQDD---GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp CHHHHHHHHT----TTCCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred CHHHHHHHHh----CCCCCcccCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH
Confidence 5566666653 45 78888777 9999999999999999999999999 43 678999999999999999999
Q ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHH
Q 007758 291 EVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEAS 360 (590)
Q Consensus 291 ~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~ 360 (590)
+|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..++...+..+.
T Consensus 162 ~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 162 ILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999999999999999999999999999999999999999988765544433
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.5e-33 Score=271.67 Aligned_cols=214 Identities=18% Similarity=0.087 Sum_probs=193.3
Q ss_pred HHHHHHHhcCCceeeeeccccccc-ccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 141 ELIYACAAFQITELVSYFQCLLLI-LAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~d-in~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
.+|+.|+..|..+.+++++..+.. ++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~- 84 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRTDQDS--RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG- 84 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT-
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcCCCCC--CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcC-
Confidence 468999999999999988887644 55555555 9999999999984 889999999999999999999999988
Q ss_pred hhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHH
Q 007758 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKE 291 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~ 291 (590)
..+++++|++ +|++++..+. .|.||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++
T Consensus 85 ~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 157 (231)
T 3aji_A 85 XDEIVKALLV----KGAHVNAVNQ---NGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157 (231)
T ss_dssp CHHHHHHHHH----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHH----cCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 5556666653 6999999888 9999999999999999999999999 4 36789999999999999999999
Q ss_pred HHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 007758 292 VLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQE 365 (590)
Q Consensus 292 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~ 365 (590)
|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++++.+.|++
T Consensus 158 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 158 LLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 99998 99999999999999999999999999999999999999999999999999999999999999887754
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.8e-32 Score=282.81 Aligned_cols=219 Identities=23% Similarity=0.160 Sum_probs=195.7
Q ss_pred hhhHHHHHHHhcCCceeeeeccc-ccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccC
Q 007758 138 YAVELIYACAAFQITELVSYFQC-LLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELP 212 (590)
Q Consensus 138 ~~lelL~~A~~~~~~elv~~Ll~-~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~ 212 (590)
+..+.|+.|+..|..+.+..++. .+.+++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+.
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRK--STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHH
Confidence 34477888888888887766655 588998877766 9999999999984 8999999999999999999999999
Q ss_pred ccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CCC---------------------
Q 007758 213 DEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EVT--------------------- 270 (590)
Q Consensus 213 ~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~id--------------------- 270 (590)
.+ ..+++++|++ +|++++..|. .|.||||+|+..|+.+++++|+++| +++
T Consensus 101 ~g-~~~iv~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 101 YG-HYEVTELLLK----HGACVNAMDL---WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp TT-CHHHHHHHHH----TTCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred CC-CHHHHHHHHH----CCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHH
Confidence 99 5566666664 6999999888 9999999999999999999999998 332
Q ss_pred ------------------------------------CCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCcHH
Q 007758 271 ------------------------------------LDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRTVL 311 (590)
Q Consensus 271 ------------------------------------~~G~TpLh~Aa~~---g~~~iv~~LL~~g~advn~~d~~G~TpL 311 (590)
..|.||||+|+.. +..+++++|++.| +++|.+|..|+|||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L 251 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTPL 251 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTTCCCHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCCCCCHH
Confidence 4578999999999 5589999999998 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 312 HVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 312 h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
|+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++++++++.|+++.
T Consensus 252 ~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 252 HVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999875
No 13
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-32 Score=294.80 Aligned_cols=280 Identities=16% Similarity=0.075 Sum_probs=232.2
Q ss_pred HHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccch
Q 007758 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVS 216 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~ 216 (590)
++|++|+..|..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++..+..|.||||+|+..+..
T Consensus 49 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~ 126 (437)
T 1n11_A 49 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD--QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 126 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTS--CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC--CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 67999999999999999999999999887766 9999999999984 88999999999999999999999999855
Q ss_pred hHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHH
Q 007758 217 SEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEV 292 (590)
Q Consensus 217 ~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~L 292 (590)
+.+..++. +|++++..+. .|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+..|+.+++++|
T Consensus 127 ~~v~~Ll~-----~~~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 198 (437)
T 1n11_A 127 ETVLALLE-----KEASQACMTK---KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198 (437)
T ss_dssp HHHHHHHH-----TTCCSCCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHh-----CCCCCcCCCC---CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 54444444 6888888877 9999999999999999999999999 43 67899999999999999999999
Q ss_pred HHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcch----
Q 007758 293 LNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNK---- 368 (590)
Q Consensus 293 L~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~~---- 368 (590)
++.| ++++.++..|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++++.+++.|.++..
T Consensus 199 l~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 277 (437)
T 1n11_A 199 LPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKS 277 (437)
T ss_dssp GGGT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred HhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCC
Confidence 9998 89999999999999999999999999999999999999999999999999999999999999988876542
Q ss_pred ------h---hchHHHHHHHHHhcccCcCcccccccCCchhhhHHHHHhc-cccc-eeecccchhhHHHhhcCCCccccc
Q 007758 369 ------D---WLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEK-KVAG-VWLFPSEAREAMEIAGADTATGLS 437 (590)
Q Consensus 369 ------~---~~~~~~l~~~~~~~p~~~d~~~~~~~~~~~l~~~~~~le~-~v~~-~~l~~~ea~~~~~ia~~d~t~~l~ 437 (590)
. ....++++..+.. ..+++..+ ..|.+.+ +.+... ++.+ ++|+..++++ +..+..|.+||.
T Consensus 278 g~t~L~~A~~~~~~~~~~~Ll~~---g~~~~~~~-~~g~t~L--~~A~~~g~~~~v~~Ll~~gad~--n~~~~~g~t~L~ 349 (437)
T 1n11_A 278 GLTPLHLVAQEGHVPVADVLIKH---GVMVDATT-RMGYTPL--HVASHYGNIKLVKFLLQHQADV--NAKTKLGYSPLH 349 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH---TCCTTCCC-SSCCCHH--HHHHHSSCSHHHHHHHHTTCCT--TCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC---CccCCCCC-CCCCCHH--HHHHHcCcHHHHHHHHhcCCCC--CCCCCCCCCHHH
Confidence 1 3456666664443 22333332 3455666 666666 8888 9998877653 334445556665
Q ss_pred cc
Q 007758 438 AL 439 (590)
Q Consensus 438 ~~ 439 (590)
.+
T Consensus 350 ~A 351 (437)
T 1n11_A 350 QA 351 (437)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.1e-33 Score=292.86 Aligned_cols=219 Identities=13% Similarity=0.025 Sum_probs=196.8
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCcc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDE 214 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~ 214 (590)
..++|++|+..|..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++. ..|.||||+|+..+
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFG--CTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC--CcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcC
Confidence 4588999999999999999999999999988766 9999999999984 88899996544 57999999999999
Q ss_pred chhHHHHHHhhhccccCCCcCC-----------------CCcccccCCcHHHHHHhcC--CHHHHHHHHhCC-CC---CC
Q 007758 215 VSSEIKSLRVKSNQESEANIKE-----------------VDPMHEKRVRRIHKALDSD--DFELLNLLLNEY-EV---TL 271 (590)
Q Consensus 215 ~~~~i~~lL~~~~~~~Gadin~-----------------~d~~~~~g~t~Lh~A~~~g--~~~~v~~LL~~g-~i---d~ 271 (590)
..+++++|++...+.|++++. .+. .|.||||+|+..| +.++|++|+++| ++ |.
T Consensus 96 -~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~ 171 (364)
T 3ljn_A 96 -KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC---KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171 (364)
T ss_dssp -CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE---SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT
T ss_pred -CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC---CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC
Confidence 566666666443333777766 555 9999999999999 999999999999 43 67
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCC-----ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHH
Q 007758 272 DDAFALHYAAAYCNPKVFKEVLNMGLAD-----LNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAI 346 (590)
Q Consensus 272 ~G~TpLh~Aa~~g~~~iv~~LL~~g~ad-----vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~ 346 (590)
.|+||||+|+..|+.++|++||+.| ++ +|.+|..|+||||+|+..|+.++|++||++|+++|.+|..|+||||+
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 8999999999999999999999998 88 99999999999999999999999999999999999999999999999
Q ss_pred HHHcCChhhHHHHHhcCCCc
Q 007758 347 CRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 347 A~~~~~~~~v~~l~~~G~~~ 366 (590)
|+..|+.++++++++.|+.+
T Consensus 251 A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 251 SVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHTCCHHHHHHHHHHSCHH
T ss_pred HHHhChHHHHHHHHHcCCch
Confidence 99999999999999998765
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.7e-33 Score=278.71 Aligned_cols=205 Identities=16% Similarity=0.115 Sum_probs=167.3
Q ss_pred hHHHHHHHhcCCceeeeeccccccc---ccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccC
Q 007758 140 VELIYACAAFQITELVSYFQCLLLI---LAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELP 212 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~d---in~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~ 212 (590)
.++|++|+..+..+++++|+++|++ ++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+.
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLG--QTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACR 87 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 4689999999999999999999988 67766655 9999999999984 8999999999999999999999999
Q ss_pred ccchhHHHHHHhhhcc-------------------------------------------ccCCCcCCCCcccccCCcHHH
Q 007758 213 DEVSSEIKSLRVKSNQ-------------------------------------------ESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 213 ~~~~~~i~~lL~~~~~-------------------------------------------~~Gadin~~d~~~~~g~t~Lh 249 (590)
.+ ...++++|++... ..+++++..+. .|.||||
T Consensus 88 ~~-~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~t~L~ 163 (282)
T 1oy3_D 88 VR-AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY---DGHTPLH 163 (282)
T ss_dssp TT-CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT---TSCCHHH
T ss_pred cC-CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC---CCcCHHH
Confidence 88 5566666653210 01233555555 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---C-CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---T-LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d-~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
+|+..|+.++|++|+++| ++ + ..|+||||+|+..|+.++|++||+.| +++|.+|..|+||||+|+.+|+.++++
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 999999999999999999 44 3 34999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCcCCCCCCcHHHHHHHcC
Q 007758 325 TLLSKGACASETTSDGRTAVAICRRMT 351 (590)
Q Consensus 325 ~LL~~Gadvn~~d~~G~TpL~~A~~~~ 351 (590)
+|+++||+++.+|..|.|||++|....
T Consensus 243 ~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 243 LLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHTTCCCCCCC--------------
T ss_pred HHHHcCCCcCcCCCcccccccccCCcc
Confidence 999999999999999999999998765
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=4.7e-32 Score=272.91 Aligned_cols=191 Identities=19% Similarity=0.126 Sum_probs=173.1
Q ss_pred cccCCCCCCchHHHHHHHcCcH----HHHhcccc---cccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCC
Q 007758 166 AENAPVEDVIPILVAALHCQLN----RLHSCCIQ---RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD 238 (590)
Q Consensus 166 n~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~d---i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d 238 (590)
+.++..| .||||+|+..|+. .|+++|++ ++.++..|.||||+|+..+ ...++++|++ +|++++..+
T Consensus 3 ~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~----~ga~~~~~~ 75 (282)
T 1oy3_D 3 GYVTEDG--DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILG-EASTVEKLYA----AGAGVLVAE 75 (282)
T ss_dssp CCCCTTC--CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHT-CHHHHHHHHH----TTCCSSCCC
T ss_pred CccCCCC--CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCCCC
Confidence 3444444 9999999999984 88888988 8899999999999999999 5566666653 699999988
Q ss_pred cccccCCcHHHHHHhcCCHHHHHHHHhCC-C-------------------------------------------------
Q 007758 239 PMHEKRVRRIHKALDSDDFELLNLLLNEY-E------------------------------------------------- 268 (590)
Q Consensus 239 ~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~------------------------------------------------- 268 (590)
. .|+||||+|+..|+.+++++|+++| +
T Consensus 76 ~---~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T 1oy3_D 76 R---GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152 (282)
T ss_dssp T---TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT
T ss_pred C---CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC
Confidence 8 9999999999999999999999976 2
Q ss_pred -CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHH
Q 007758 269 -VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR-GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAI 346 (590)
Q Consensus 269 -id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~-G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~ 346 (590)
.+..|.||||+|+..|+.++|++|++.| +++|.++.. |+||||+|+..|+.++|++|+++|++++.+|..|+||||+
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHH
Confidence 2457999999999999999999999998 999999865 9999999999999999999999999999999999999999
Q ss_pred HHHcCChhhHHHHHhcCCCcc
Q 007758 347 CRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 347 A~~~~~~~~v~~l~~~G~~~~ 367 (590)
|+..|+.++++++++.|+++.
T Consensus 232 A~~~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 232 ALLRPNPILARLLRAHGAPEP 252 (282)
T ss_dssp HHTSSCHHHHHHHHHTTCCCC
T ss_pred HHHcCCcHHHHHHHHcCCCcC
Confidence 999999999999999999886
No 17
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.8e-32 Score=279.05 Aligned_cols=211 Identities=15% Similarity=0.050 Sum_probs=181.1
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
.++|++|+..+..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~- 136 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADH--VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSG- 136 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTC--CCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC--CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-
Confidence 367999999999999999999999999887766 9999999999884 888999999999999999999999888
Q ss_pred hhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHH
Q 007758 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKE 291 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~ 291 (590)
...++++|++ +|++++..+ .|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++
T Consensus 137 ~~~~v~~Ll~----~g~~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 137 SWDCVNLLLQ----HGASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp CHHHHHHHHH----TTCCSSCSC----TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHH----CCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 5556666653 588887543 6999999999999999999999998 43 6788999999999999999999
Q ss_pred HHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhc-CCC
Q 007758 292 VLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQ-GQE 365 (590)
Q Consensus 292 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~-G~~ 365 (590)
|++.| +++|. |..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+ ++.++++.+++. |++
T Consensus 209 Ll~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~ 279 (285)
T 3d9h_A 209 LLESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGAS 279 (285)
T ss_dssp HHHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC---
T ss_pred HHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccC
Confidence 99998 89985 889999999999999999999999999999999999999999998 457888888887 554
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.2e-31 Score=272.89 Aligned_cols=215 Identities=15% Similarity=0.061 Sum_probs=175.9
Q ss_pred hhHHHHHHHhcCCc-eeee------------ecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccC
Q 007758 139 AVELIYACAAFQIT-ELVS------------YFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSN 201 (590)
Q Consensus 139 ~lelL~~A~~~~~~-elv~------------~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~ 201 (590)
...++|+|+..|.. ++.+ .++... ++.++..+ .||||+|+..|+. .|+++|++++.++.
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~g--~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~ 90 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNP--LMGDAVSD--WSPMHEAAIHGHQLSLRNLISQGWAVNIITA 90 (285)
T ss_dssp ---------------------------CCSEECCCCT--TCSSSCCS--CCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCc--ccCCCccC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 34678888888774 4444 222332 34444444 9999999999984 88999999999999
Q ss_pred CCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C--CCCCCccHHH
Q 007758 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E--VTLDDAFALH 278 (590)
Q Consensus 202 ~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~--id~~G~TpLh 278 (590)
.|.||||+|+..+ ..+++++|++ +|++++..|. .|.||||+|+..|+.+++++|++.| + .+..|.||||
T Consensus 91 ~g~t~L~~A~~~g-~~~~v~~Ll~----~ga~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~ 162 (285)
T 3d9h_A 91 DHVSPLHEACLGG-HLSCVKILLK----HGAQVNGVTA---DWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIH 162 (285)
T ss_dssp TCCCHHHHHHHTT-CHHHHHHHHH----TTCCSSCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHH
T ss_pred CCCCHHHHHHHCC-cHHHHHHHHH----CCCCCCCCCC---CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 9999999999999 5566666653 6999999988 9999999999999999999999999 3 4567999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHH
Q 007758 279 YAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIE 358 (590)
Q Consensus 279 ~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~ 358 (590)
+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..++.+++++
T Consensus 163 ~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~ 240 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACL 240 (285)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999998 99999999999999999999999999999999999995 8999999999999999999999
Q ss_pred HHhcCCCcc
Q 007758 359 ASKQGQETN 367 (590)
Q Consensus 359 l~~~G~~~~ 367 (590)
+++.|+++.
T Consensus 241 Ll~~gad~~ 249 (285)
T 3d9h_A 241 LMDFGADTQ 249 (285)
T ss_dssp HHHTTCCTT
T ss_pred HHHCCCCCC
Confidence 999998764
No 19
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=9.5e-32 Score=279.41 Aligned_cols=266 Identities=17% Similarity=0.045 Sum_probs=167.2
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
.++|+.|+..|..++|++|+++|+|+|.++.. .|.||||+|+..|+. .|+++|++++.++..+.++++.+...+.
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~-~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEE-GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCC-CCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 46799999999999999999999999987643 248999999999984 8889998887777777777666666553
Q ss_pred hhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC-------------CCCCccHHHHHH
Q 007758 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-------------TLDDAFALHYAA 281 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i-------------d~~G~TpLh~Aa 281 (590)
...+..++. .+++++..|. .|.||||+|+..|+.+++++|+++| ++ +..|.||||+|+
T Consensus 105 ~~~~~~~~~-----~~~~~~~~d~---~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~ 176 (337)
T 4g8k_A 105 VKLLKLFLS-----KGADVNECDF---YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 176 (337)
T ss_dssp HHHHHHHHT-----TTCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHH
T ss_pred chhhHHhhh-----ccchhhhhcc---CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHH
Confidence 333322222 4666666665 6666666666666666666666666 22 224566666666
Q ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHH
Q 007758 282 AYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE----PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (590)
Q Consensus 282 ~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~----~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~ 357 (590)
..|+.++|++||+..|+++|.+|..|+||||+++..+. ..++++|+++|+++|.+|..|+||||+|+..|+.+.+.
T Consensus 177 ~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~ 256 (337)
T 4g8k_A 177 EKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 256 (337)
T ss_dssp HHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHH
T ss_pred HCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHH
Confidence 66666666666654346666666666666666554432 34566666666666666666666666666666666666
Q ss_pred HHHhc-CC----------Ccchh---hchHHHHHHHHHhcccCcCcccccccCCchhhhHHHHHhc-cccc-eeecccch
Q 007758 358 EASKQ-GQ----------ETNKD---WLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEK-KVAG-VWLFPSEA 421 (590)
Q Consensus 358 ~l~~~-G~----------~~~~~---~~~~~~l~~~~~~~p~~~d~~~~~~~~~~~l~~~~~~le~-~v~~-~~l~~~ea 421 (590)
.+++. |. ||++. ....++++..+.. ..+++.. +.+ +.+.++ +.++ ++|+..+|
T Consensus 257 ~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~---GAd~n~~------~~L--~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 257 RLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR---GASTDCG------DLV--MTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp HHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT---SCSSTTC------CHH--HHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCC------CHH--HHHHHcCCHHHHHHHHHCcC
Confidence 65543 22 22221 3344555543321 1222221 223 444554 6677 78887777
Q ss_pred hhHH
Q 007758 422 REAM 425 (590)
Q Consensus 422 ~~~~ 425 (590)
++.+
T Consensus 326 ~~d~ 329 (337)
T 4g8k_A 326 KEDF 329 (337)
T ss_dssp CC--
T ss_pred CCCC
Confidence 7543
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.97 E-value=8.1e-32 Score=268.81 Aligned_cols=194 Identities=16% Similarity=0.137 Sum_probs=148.6
Q ss_pred ccccccCCCCCCchHHHHHHHcC-------------c----HHHHhccccccc-ccCCCccccccccCccchhHHHHHHh
Q 007758 163 LILAENAPVEDVIPILVAALHCQ-------------L----NRLHSCCIQRIA-RSNLDNVCLEKELPDEVSSEIKSLRV 224 (590)
Q Consensus 163 ~din~~~~~~~~~t~Lh~A~~~g-------------~----~~Ll~~g~di~~-~d~~g~t~L~~A~~~~~~~~i~~lL~ 224 (590)
+|+|.++..| .||||+|+..| . ..|+++|++++. .+..|.||||+|+..+ ..+++++|+
T Consensus 1 ~dvn~~d~~g--~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll 77 (253)
T 1yyh_A 1 MDVNVRGPDG--FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS-RSDAAKRLL 77 (253)
T ss_dssp -----------------------------------------------------CCCTTSCCHHHHHHHTT-CHHHHHHHH
T ss_pred CCCCCCCCCC--CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcC-CHHHHHHHH
Confidence 3677777766 99999999977 3 388899999865 4889999999999999 555666655
Q ss_pred hhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCC
Q 007758 225 KSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLAD 299 (590)
Q Consensus 225 ~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g--~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~ad 299 (590)
+ +|++++..|. .|+||||+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|++.| ++
T Consensus 78 ~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~ 149 (253)
T 1yyh_A 78 E----ASADANIQDN---MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-AD 149 (253)
T ss_dssp H----TTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CC
T ss_pred H----cCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CC
Confidence 3 6999999988 9999999999999999999999998 3 3678999999999999999999999998 99
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 300 LNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 300 vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++++++.|+++.
T Consensus 150 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 150 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999998764
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=266.08 Aligned_cols=184 Identities=17% Similarity=0.099 Sum_probs=170.7
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
|.||||+|+..|+. .|+++|++++.++..|.||||+|+..+ ..+++++|++ +|++++..|. .|.||||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 74 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGG-HLSCVKILLK----HGAQVNGVTA---DWHTPLF 74 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHH----CCCCCCCCCC---CCCCHHH
Confidence 58999999999984 889999999999999999999999998 5556666653 6999999988 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-C--CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-E--VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETL 326 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~--id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 326 (590)
+|+..|+.+++++|+++| + .+.+|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVKKL 153 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999 4 4567999999999999999999999998 99999999999999999999999999999
Q ss_pred HhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 327 LSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 327 L~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+++|+++|. +..|+||||+|+..++.++++.+++.|+++.
T Consensus 154 l~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 154 LESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp HHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999995 8999999999999999999999999998874
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=8.9e-32 Score=262.75 Aligned_cols=200 Identities=16% Similarity=0.055 Sum_probs=174.2
Q ss_pred HHHHHHHhcCCceeeeecccccccccc-cCCCCCCchHHHHHHHcCcH----HHHhcc--ccccc-ccCCCccccccccC
Q 007758 141 ELIYACAAFQITELVSYFQCLLLILAE-NAPVEDVIPILVAALHCQLN----RLHSCC--IQRIA-RSNLDNVCLEKELP 212 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~din~-~~~~~~~~t~Lh~A~~~g~~----~Ll~~g--~di~~-~d~~g~t~L~~A~~ 212 (590)
++|++|+..+..+++++|++.+.+++. ++..+ .||||+|+..++. .|+++| ++++. .+..|.||||+|+.
T Consensus 4 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 4 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDG--RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHhCCHHHHHHHHhcCccccccCCCCC--CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 579999999999999999999987765 45544 9999999999984 888999 66666 77899999999999
Q ss_pred ccchhHHHHHHhhhccccC--CCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCH
Q 007758 213 DEVSSEIKSLRVKSNQESE--ANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNP 286 (590)
Q Consensus 213 ~~~~~~i~~lL~~~~~~~G--adin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~ 286 (590)
.+ ..+++++|++ +| ++++..+. .|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.
T Consensus 82 ~~-~~~~~~~Ll~----~g~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 82 VG-NLEVVKSLYD----RPLKPDLNKITN---QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp HC-CHHHHHHHHS----SSSCCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred cC-CHHHHHHHHh----CCCCcccccCCc---CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 88 5555565553 56 77888777 9999999999999999999999998 43 67899999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH-hCCCCCCcCCCCCCcHHHHHHHc
Q 007758 287 KVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLL-SKGACASETTSDGRTAVAICRRM 350 (590)
Q Consensus 287 ~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpL~~A~~~ 350 (590)
+++++|++.|.+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+..
T Consensus 154 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 154 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 99999999987999999999999999999999999999999 88999999999999999999754
No 23
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=259.96 Aligned_cols=217 Identities=15% Similarity=0.069 Sum_probs=194.0
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCC-CccccccccCc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNL-DNVCLEKELPD 213 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~-g~t~L~~A~~~ 213 (590)
...+|+.|+..+..+++++|++.|++++.++..+ .||||+|+..++. .|+++|.+++..... |.||||+|+..
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~ 86 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQPDKEN--VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQ 86 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCC--CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHc
Confidence 3456999999999999999999999999887666 9999999999984 888999998866654 99999999998
Q ss_pred cchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCC-HHH
Q 007758 214 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCN-PKV 288 (590)
Q Consensus 214 ~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~-~~i 288 (590)
+ ...++++|++ +|++++..+. .|.||||+|+..|+.+++++|+++| + .+..|.||||+|+..++ .++
T Consensus 87 ~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 158 (240)
T 3eu9_A 87 G-HLSMVVQLMK----YGADPSLIDG---EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDP 158 (240)
T ss_dssp T-CHHHHHHHHH----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTT
T ss_pred C-CHHHHHHHHH----cCCCCcccCC---CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHH
Confidence 8 5555566553 6999999888 9999999999999999999999999 4 36789999999997776 889
Q ss_pred HHHHHHcCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 289 FKEVLNMGLADLNLKDA-RGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 289 v~~LL~~g~advn~~d~-~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
+++|++.| ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+.++++.+.+.|+..
T Consensus 159 ~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 159 TRLLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 99999998 99999997 9999999999999999999999999999999999999999999999999999999998754
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.2e-30 Score=256.44 Aligned_cols=193 Identities=18% Similarity=0.150 Sum_probs=176.3
Q ss_pred cccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCc
Q 007758 164 ILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP 239 (590)
Q Consensus 164 din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~ 239 (590)
+++.++..+ .||||+|+..|+. .|+++|++++..+..|.||||+|+..+ ..+++++|++ +|++++..+.
T Consensus 3 ~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~ 75 (237)
T 3b7b_A 3 NFKMEHQNK--RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENN-HLEAVKYLIK----AGALVDPKDA 75 (237)
T ss_dssp CCCCSSCCS--CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT-CHHHHHHHHT----TTCCCCCCCT
T ss_pred CcccccCCC--CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhC-CHHHHHHHHh----CCCCCCCCCC
Confidence 455555544 9999999999984 889999999999999999999999998 5566666653 6999999888
Q ss_pred ccccCCcHHHHHHhcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHH
Q 007758 240 MHEKRVRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVA 314 (590)
Q Consensus 240 ~~~~g~t~Lh~A~~~g~~~~v~~LL~~g--~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~A 314 (590)
.|.||||+|+..|+.+++++|++.| + .+..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|
T Consensus 76 ---~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 76 ---EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWA 151 (237)
T ss_dssp ---TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred ---CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHH
Confidence 9999999999999999999999998 3 3678999999999999999999999998 99999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 315 ARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 315 a~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++.+++.|+++.
T Consensus 152 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 152 AFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999998764
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=8.8e-31 Score=256.87 Aligned_cols=184 Identities=16% Similarity=0.155 Sum_probs=164.8
Q ss_pred CchHHHHHHHcCcH----HHHhc-ccccccccCCCccccccccCccchhHHHHHHhhhccccCCCc-----CCCCccccc
Q 007758 174 VIPILVAALHCQLN----RLHSC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANI-----KEVDPMHEK 243 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~-g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadi-----n~~d~~~~~ 243 (590)
+.||||+|+..|+. .|++. |++++.+|..|.||||+|+..+ ..+++++|++ +|+++ +..|. .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~----~~~~~~~~~~~~~~~---~ 74 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYD-NLEAAMVLME----AAPELVFEPMTSELY---E 74 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----HCGGGGGCCCCSTTT---T
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcC-CHHHHHHHHH----cCchhccccccccCC---C
Confidence 48999999999984 67776 9999999999999999999999 5566666654 57776 44444 9
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCC-CCCC----------------CCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007758 244 RVRRIHKALDSDDFELLNLLLNEY-EVTL----------------DDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR 306 (590)
Q Consensus 244 g~t~Lh~A~~~g~~~~v~~LL~~g-~id~----------------~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~ 306 (590)
|.||||+|+..|+.+++++|+++| +++. .|+||||+|+..|+.+++++|++.| +++|.+|..
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~ 153 (232)
T 2rfa_A 75 GQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSL 153 (232)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTT
T ss_pred CcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCC
Confidence 999999999999999999999999 4432 6999999999999999999999998 999999999
Q ss_pred CCcHHHHHHHcCCHHHH----HHHHhCCCCC------CcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 307 GRTVLHVAARRKEPAVL----ETLLSKGACA------SETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 307 G~TpLh~Aa~~g~~~iv----~~LL~~Gadv------n~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|+..|+.++++.++++|..+
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999999999988 9999999998 589999999999999999999999999998654
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=6.5e-32 Score=275.05 Aligned_cols=200 Identities=20% Similarity=0.075 Sum_probs=181.6
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV 215 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~ 215 (590)
..+|+.|+..|..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g- 117 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDG--LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCG- 117 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTC--CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT-
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC--CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC-
Confidence 468999999999999999999999999988766 9999999999984 899999999999999999999999998
Q ss_pred hhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC--C-------------------------
Q 007758 216 SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E------------------------- 268 (590)
Q Consensus 216 ~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g--~------------------------- 268 (590)
..+++++|++ +|++++..+. .|.||||+|+..|+.++++.|+... +
T Consensus 118 ~~~~v~~Ll~----~g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 118 YLDIAEYLIS----QGAHVGAVNS---EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp CHHHHHHHHH----TTCCTTCCCT---TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHh----CCCCCCCcCC---CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 5556666653 6999999888 9999999999999999998877532 1
Q ss_pred ----CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHH
Q 007758 269 ----VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAV 344 (590)
Q Consensus 269 ----id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 344 (590)
.+..|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 269 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAF 269 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 2467999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHc
Q 007758 345 AICRRM 350 (590)
Q Consensus 345 ~~A~~~ 350 (590)
|+|+..
T Consensus 270 ~~A~~~ 275 (299)
T 1s70_B 270 DVADED 275 (299)
T ss_dssp TSCCSG
T ss_pred HHHHHH
Confidence 999754
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=8.4e-31 Score=271.70 Aligned_cols=214 Identities=21% Similarity=0.105 Sum_probs=189.1
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCcc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDE 214 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~ 214 (590)
..++|++|+..+..+++++|+++|++++.++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 135 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGG--LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKN 135 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC--CcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 3468999999999999999999999999988766 9999999999984 899999999999999999999999998
Q ss_pred chhHHHHHHhhhccccCCCcCCCCc---------------------------------------------------cccc
Q 007758 215 VSSEIKSLRVKSNQESEANIKEVDP---------------------------------------------------MHEK 243 (590)
Q Consensus 215 ~~~~i~~lL~~~~~~~Gadin~~d~---------------------------------------------------~~~~ 243 (590)
..+++++|++ +|++++..+. .+..
T Consensus 136 -~~~~v~~Ll~----~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 210 (351)
T 3utm_A 136 -RVEVCSLLLS----HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQS 210 (351)
T ss_dssp -CHHHHHHHHH----TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTT
T ss_pred -CHHHHHHHHH----cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCC
Confidence 5566666653 6888876552 2346
Q ss_pred CCcHHHHHHhc---CCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Q 007758 244 RVRRIHKALDS---DDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (590)
Q Consensus 244 g~t~Lh~A~~~---g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~ 316 (590)
|.||||+|+.. +..+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+.
T Consensus 211 ~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp CCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHH
Confidence 88999999999 5689999999999 44 678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 317 ~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
.|+.++|++|+++|++++.+|..|+||+|+| +.++++.+.+.+.
T Consensus 290 ~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~ 333 (351)
T 3utm_A 290 AGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTP 333 (351)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC--
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccc
Confidence 9999999999999999999999999999998 5566777666654
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=2.6e-30 Score=268.57 Aligned_cols=222 Identities=17% Similarity=0.126 Sum_probs=195.2
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCcc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDE 214 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~ 214 (590)
..++|++|+..+..+++++|+++|++++.++..+ .++++.++..+.. .++..+++++.++..|.||||+|+..+
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~ 136 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNG--ATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYG 136 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC--CCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTT
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCC--CchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcC
Confidence 3468999999999999999999999999987766 9999999998874 788999999999999999999999999
Q ss_pred chhHHHHHHhhhccccCCCcCCCCc-------ccccCCcHHHHHHhcCCHHHHHHHHh-CC-CC---CCCCccHHHHHHH
Q 007758 215 VSSEIKSLRVKSNQESEANIKEVDP-------MHEKRVRRIHKALDSDDFELLNLLLN-EY-EV---TLDDAFALHYAAA 282 (590)
Q Consensus 215 ~~~~i~~lL~~~~~~~Gadin~~d~-------~~~~g~t~Lh~A~~~g~~~~v~~LL~-~g-~i---d~~G~TpLh~Aa~ 282 (590)
...+++++++ +|++++..+. .+..|.||||+|+..|+.++|++||+ .| ++ |..|.||||+++.
T Consensus 137 -~~~~~~~ll~----~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~ 211 (337)
T 4g8k_A 137 -KVKALKFLYK----RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 211 (337)
T ss_dssp -CHHHHHHHHH----TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred -cHHHHHHHHH----cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHH
Confidence 4455555543 6888876543 34479999999999999999999996 46 44 6789999999887
Q ss_pred cCC----HHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCcCCCCCCcHHHHHHHcCChhhHH
Q 007758 283 YCN----PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSK-GACASETTSDGRTAVAICRRMTRRKDYI 357 (590)
Q Consensus 283 ~g~----~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpL~~A~~~~~~~~v~ 357 (590)
.++ ..++++|++.| +++|.+|..|+||||+|+..|+.+++++|++. |+++|.+|.+|+||||+|++.|+.++++
T Consensus 212 ~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 212 SSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp HSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 654 45788899988 99999999999999999999999999999985 8999999999999999999999999999
Q ss_pred HHHhcCCCcch
Q 007758 358 EASKQGQETNK 368 (590)
Q Consensus 358 ~l~~~G~~~~~ 368 (590)
+|++.|+++..
T Consensus 291 ~Ll~~GAd~n~ 301 (337)
T 4g8k_A 291 LLCKRGASTDC 301 (337)
T ss_dssp HHHTTSCSSTT
T ss_pred HHHHCCCCCCC
Confidence 99999998763
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=9.3e-31 Score=264.53 Aligned_cols=185 Identities=19% Similarity=0.083 Sum_probs=145.7
Q ss_pred chHHHHHHHcCcH----HHHhcccc--------cccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccc
Q 007758 175 IPILVAALHCQLN----RLHSCCIQ--------RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHE 242 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~g~d--------i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~ 242 (590)
.++|+.|+..|+. .|++.|.+ ++..+..|.|||+.|+..+....++.+|++ +|+++|..|.
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~----~Gadvn~~d~--- 84 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA----SGLGVNVTSQ--- 84 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC--------------------------------------------CCCCTTCCCT---
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHH----CCCCCCCcCC---
Confidence 8999999999984 77888765 566778899999999987755556555553 7999999988
Q ss_pred cCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Q 007758 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (590)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g 318 (590)
+|+||||+|+..|+.++|++|++.| ++ +..|.||||+|+..++.+++++|++.| +++|.+|..|+||||+||..|
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYACSGG 163 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCC
Confidence 9999999999999999999999999 43 678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 319 EPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 319 ~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+.++|++||++|+++|.++..|+||||+|+..|+.+++++|++.|+++.
T Consensus 164 ~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~ 212 (269)
T 4b93_B 164 HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ 212 (269)
T ss_dssp CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999999999999998774
No 30
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-30 Score=275.25 Aligned_cols=215 Identities=16% Similarity=0.140 Sum_probs=188.4
Q ss_pred hHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----H--------HHhcccccccccCCCcccc
Q 007758 140 VELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----R--------LHSCCIQRIARSNLDNVCL 207 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~--------Ll~~g~di~~~d~~g~t~L 207 (590)
..+|++|+..+ .+++++|+. .+++.++. ..+.||||+|+..|+. . |++.|++++.+|..|.|||
T Consensus 95 ~t~L~~Aa~~~-~~~~~~L~~--~~~n~~d~-~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL 170 (373)
T 2fo1_E 95 PIKLHTEAAGS-YAITEPITR--ESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPL 170 (373)
T ss_dssp CCHHHHHHHSS-SCCCSCCST--TTTTTCCC-SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHH
T ss_pred ccHHHHHhcCC-chHHHHhcc--ccccccCC-cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHH
Confidence 35788999866 478888875 46666552 2349999999999873 3 3489999999999999999
Q ss_pred ccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC----C---CCCCCccHHHHH
Q 007758 208 EKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY----E---VTLDDAFALHYA 280 (590)
Q Consensus 208 ~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g----~---id~~G~TpLh~A 280 (590)
|+|+..+ ..+++++|++ +|++++..+. .|.||||+|+..|+.+++++|+++| + .|..|.||||+|
T Consensus 171 ~~A~~~g-~~~iv~~Ll~----~ga~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 171 MLAVLAR-RRRLVAYLMK----AGADPTIYNK---SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp HHHHHHT-CHHHHHHHHH----TTCCSCCCCT---TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred HHHHHcC-hHHHHHHHHH----CCCCCcccCC---CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 9999999 5566666664 6999999888 9999999999999999999999986 3 378899999999
Q ss_pred HHcC---CHHHHHHHHHcCCCCccc--------cCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCcCCCCCCcHHHHHH
Q 007758 281 AAYC---NPKVFKEVLNMGLADLNL--------KDARGRTVLHVAARRKEPAVLETLLSKG-ACASETTSDGRTAVAICR 348 (590)
Q Consensus 281 a~~g---~~~iv~~LL~~g~advn~--------~d~~G~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpL~~A~ 348 (590)
+..+ +.+++++|++.| ++++. +|..|+||||+|+..|+.++|++|+++| +++|.+|..|+||||+|+
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 9998 899999999998 99886 6789999999999999999999999876 999999999999999999
Q ss_pred HcCChhhHHHHHhcCCCcc
Q 007758 349 RMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 349 ~~~~~~~v~~l~~~G~~~~ 367 (590)
..|+.++++++++.|+++.
T Consensus 322 ~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 322 QEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp HHTCHHHHHHHHHTTCCSS
T ss_pred HcCCHHHHHHHHHcCCCcc
Confidence 9999999999999998764
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=4.9e-30 Score=252.31 Aligned_cols=190 Identities=19% Similarity=0.138 Sum_probs=170.8
Q ss_pred ccCCCCCCchHHHHHHHcCcH----HHHh----cccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCC
Q 007758 167 ENAPVEDVIPILVAALHCQLN----RLHS----CCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD 238 (590)
Q Consensus 167 ~~~~~~~~~t~Lh~A~~~g~~----~Ll~----~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d 238 (590)
.+|..+ .||||+|+..|+. .|++ .|++++.++..|.||||+|+..+ ..+++++|++ +|++++..+
T Consensus 4 ~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~ 76 (241)
T 1k1a_A 4 RADEDG--DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITT-LPSVVRLLVT----AGASPMALD 76 (241)
T ss_dssp ---CTT--CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCC
T ss_pred ccCCCC--CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcC-CHHHHHHHHH----cCCCccccC
Confidence 344444 9999999999984 5554 78999999999999999999999 5566666653 699999988
Q ss_pred cccccCCcHHHHHHhcCCHHHHHHHHhCC-----C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCc
Q 007758 239 PMHEKRVRRIHKALDSDDFELLNLLLNEY-----E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRT 309 (590)
Q Consensus 239 ~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-----~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d-~~G~T 309 (590)
. .|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.++ ..|+|
T Consensus 77 ~---~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t 152 (241)
T 1k1a_A 77 R---HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRS 152 (241)
T ss_dssp T---TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCC
T ss_pred C---CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCc
Confidence 8 9999999999999999999999987 2 2568999999999999999999999998 9999999 89999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 310 VLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 310 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
|||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.+++.|+++.
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998764
No 32
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.6e-31 Score=261.79 Aligned_cols=186 Identities=18% Similarity=0.179 Sum_probs=167.0
Q ss_pred CCchHHHHHHHcCcH----HHHhccc----ccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccC
Q 007758 173 DVIPILVAALHCQLN----RLHSCCI----QRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKR 244 (590)
Q Consensus 173 ~~~t~Lh~A~~~g~~----~Ll~~g~----di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g 244 (590)
++.||||+|+..|+. .|++.+. +++.++..|.||||+|+..+ ...++++|++ +|++++..|. .|
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g 78 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITN-QPEIAEALLG----AGCDPELRDF---RG 78 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTT-CHHHHHCCCS----CCCCSCCCCT---TC
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCCcCC---CC
Confidence 349999999999974 5555554 78999999999999999988 5666666553 7999999888 99
Q ss_pred CcHHHHHHhcCCHHHHHHHHhCC-C---------CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCC-CCCcHHHH
Q 007758 245 VRRIHKALDSDDFELLNLLLNEY-E---------VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDA-RGRTVLHV 313 (590)
Q Consensus 245 ~t~Lh~A~~~g~~~~v~~LL~~g-~---------id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~-~G~TpLh~ 313 (590)
+||||+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| +++|.++. .|+||||+
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-ADVNAQEPCNGRTALHL 157 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCHHHH
Confidence 99999999999999999999987 2 2567999999999999999999999998 99999998 99999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 314 AARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 314 Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
|+..|+.++|++|+++|++++.+|..|+||||+|+..++.++++++++.|+.+.
T Consensus 158 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 158 AVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 999999999999999999999999999999999999999999999999999764
No 33
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=4e-30 Score=246.26 Aligned_cols=182 Identities=19% Similarity=0.118 Sum_probs=165.6
Q ss_pred CchHHHHHHHcCcH----HHHhccc-ccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCI-QRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~-di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
+.||||.|+..|.. .|+..+. +++..+..|.||||+|+..+ ..+++++|++ +|++++..+. .|.|||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~l 76 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNN-DIEIAKALID----RGADINLQNS---ISDSPY 76 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHT-CHHHHHHHHH----TTCCTTCCCT---TSCCHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCCCCC---CCCCHH
Confidence 38999999999984 5565554 99999999999999999988 5566666653 6999999888 999999
Q ss_pred HHHHhcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCC----
Q 007758 249 HKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE---- 319 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g--~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~---- 319 (590)
|+|+..|+.+++++|++.+ + .|..|.||||+|+..|+.+++++|++.|+++++.+|..|+||||+|+..++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 9999999999999999554 3 367899999999999999999999999989999999999999999999998
Q ss_pred -HHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 007758 320 -PAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (590)
Q Consensus 320 -~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G 363 (590)
.+++++|+++|++++.+|..|+||||+|+..|+.++++++++.|
T Consensus 157 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999999999887
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4e-30 Score=241.68 Aligned_cols=155 Identities=28% Similarity=0.341 Sum_probs=137.4
Q ss_pred cccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHH
Q 007758 205 VCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYA 280 (590)
Q Consensus 205 t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~A 280 (590)
++|+.|+..+..+ +++.|++ +|+|+|..|. .|+||||+|+..++.+++++|++.| ++ |.+|+||||+|
T Consensus 6 ~~L~~Aa~~G~~~-~v~~Ll~----~Gadvn~~d~---~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A 77 (169)
T 4gpm_A 6 KRLIEAAENGNKD-RVKDLIE----NGADVNASDS---DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA 77 (169)
T ss_dssp HHHHHHHHTTCHH-HHHHHHH----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCHH-HHHHHHH----CCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHH
Confidence 3577888888444 4444442 7999999988 9999999999999999999999999 44 67899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHH
Q 007758 281 AAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEAS 360 (590)
Q Consensus 281 a~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~ 360 (590)
+..|+.++|++||+.| +++|.+|.+|+||||+|+..|+.++|++|+++|++++.+|.+|+||||+|++.|+.+++++++
T Consensus 78 ~~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 78 AENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcch
Q 007758 361 KQGQETNK 368 (590)
Q Consensus 361 ~~G~~~~~ 368 (590)
+.|++.-+
T Consensus 157 ~~GA~ie~ 164 (169)
T 4gpm_A 157 KQGGWLEH 164 (169)
T ss_dssp TC------
T ss_pred HCCCCcCC
Confidence 99997653
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=5.9e-31 Score=267.89 Aligned_cols=206 Identities=12% Similarity=-0.017 Sum_probs=136.6
Q ss_pred HHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCc----HHHHhcccccccccCCCccccccccCccch
Q 007758 141 ELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQL----NRLHSCCIQRIARSNLDNVCLEKELPDEVS 216 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~----~~Ll~~g~di~~~d~~g~t~L~~A~~~~~~ 216 (590)
++|++|+..+..+++++|+++|++++.++ +.||||+|+..|+ +.|+++|++++.++..|.||||+|+..+ .
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~----g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g-~ 107 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNAGALKNLLE----NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSG-N 107 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTGGGSCCT----TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-C
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCC----CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcC-C
Confidence 45677777777777777777777766552 3677777777665 2666777777777777777777777666 4
Q ss_pred hHHHHHHhhhccccCCCcCCCCcccccC-CcHHHHHHhcCCHHHHHHHHhCC-CC-CC-CCccHHHHHHHcCCHHHHHHH
Q 007758 217 SEIKSLRVKSNQESEANIKEVDPMHEKR-VRRIHKALDSDDFELLNLLLNEY-EV-TL-DDAFALHYAAAYCNPKVFKEV 292 (590)
Q Consensus 217 ~~i~~lL~~~~~~~Gadin~~d~~~~~g-~t~Lh~A~~~g~~~~v~~LL~~g-~i-d~-~G~TpLh~Aa~~g~~~iv~~L 292 (590)
.+++++|++ +|++++..+. .| .||||+|+..|+.+++++|+++| +. +. .|+||||+|+..|+.+++++|
T Consensus 108 ~~~v~~Ll~----~ga~~~~~~~---~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 108 MQTVKLFVK----KNWRLMFYGK---TGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HHHHHHHHH----HCGGGGGCSS---SGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHh----cCCCCCccCC---CCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH
Confidence 444444443 4666666665 66 57777777777777777777776 22 33 566777777777777777777
Q ss_pred HHcCCCCccccCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 293 LNMGLADLNLKDARGRTV-LHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 293 L~~g~advn~~d~~G~Tp-Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
++.| +++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..|+.++++++++.|.++
T Consensus 181 l~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 181 LDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp HHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHH
T ss_pred HHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCC
Confidence 7766 6777777777776 7777777777777777777777766662 445566677777777666543
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.8e-31 Score=267.44 Aligned_cols=203 Identities=11% Similarity=-0.002 Sum_probs=177.6
Q ss_pred CCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhh
Q 007758 150 QITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVK 225 (590)
Q Consensus 150 ~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~ 225 (590)
+..++.++|.+. +++.++..+ .||||+|+..|+. .|+++|++++.++ |.||||+|+..+ ..+++++|++
T Consensus 11 ~~~~v~~lL~~~--~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g-~~~~v~~Ll~ 83 (285)
T 3kea_A 11 KSKQLKSFLSSK--DTFKADVHG--HSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLE-DTKIVKILLF 83 (285)
T ss_dssp CHHHHHHHHHST--TTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSS-SCHHHHHHHH
T ss_pred CHHHHHHHHHhC--CCCccCCCC--CCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcC-CHHHHHHHHH
Confidence 345566666665 466666655 9999999999984 8999999999884 899999999999 5556666653
Q ss_pred hccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCC-ccHHHHHHHcCCHHHHHHHHHcCCCCc
Q 007758 226 SNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDD-AFALHYAAAYCNPKVFKEVLNMGLADL 300 (590)
Q Consensus 226 ~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G-~TpLh~Aa~~g~~~iv~~LL~~g~adv 300 (590)
+|++++..|. .|+||||+|+..|+.+++++|+++| + .+..| .||||+|+..|+.+++++|++.| +++
T Consensus 84 ----~ga~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~~ 155 (285)
T 3kea_A 84 ----SGLDDSQFDD---KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PST 155 (285)
T ss_dssp ----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTS-CTT
T ss_pred ----CCCCCCCcCC---CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCC-Ccc
Confidence 6999999888 9999999999999999999999999 4 36778 79999999999999999999998 666
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcH-HHHHHHcCChhhHHHHHhcCCCcch
Q 007758 301 NLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTA-VAICRRMTRRKDYIEASKQGQETNK 368 (590)
Q Consensus 301 n~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~Tp-L~~A~~~~~~~~v~~l~~~G~~~~~ 368 (590)
... ..|+||||+|+..|+.+++++|+++|++++.+|..|+|| ||+|+..|+.++++++++.|+++..
T Consensus 156 ~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 156 FDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp CCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred ccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 322 289999999999999999999999999999999999998 9999999999999999999998864
No 37
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=9.2e-31 Score=261.06 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=158.3
Q ss_pred CchHHHHHHHcCcH--------HHHhccccccc----ccCCCccccccccCc---cchhHHHHHHhhhccccCCCcCCCC
Q 007758 174 VIPILVAALHCQLN--------RLHSCCIQRIA----RSNLDNVCLEKELPD---EVSSEIKSLRVKSNQESEANIKEVD 238 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~--------~Ll~~g~di~~----~d~~g~t~L~~A~~~---~~~~~i~~lL~~~~~~~Gadin~~d 238 (590)
|.||||.|+..|+. .|+++|++++. ++..|.||||+|+.. + ..+++++|++ +|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g-~~~~v~~Ll~----~g~~~~~~~ 76 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDG-VNACIMPLLQ----IDKDSGNPK 76 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTT-BCTTHHHHHH----HHHHTTCSS
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccc-hHHHHHHHHh----cCCcccchh
Confidence 47888888888874 44567888887 788888888888877 6 4455555553 466555332
Q ss_pred --------cccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCC-------------CccHHHHHHHcCCHHHHHHHH
Q 007758 239 --------PMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLD-------------DAFALHYAAAYCNPKVFKEVL 293 (590)
Q Consensus 239 --------~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~-------------G~TpLh~Aa~~g~~~iv~~LL 293 (590)
..+..|.||||+|+..|+.++|++|+++| ++ +.. |+||||+|+..|+.+++++|+
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 12348999999999999999999999999 54 333 999999999999999999999
Q ss_pred H---cCCCCccccCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCCC-------CcCCCCCCcHHHHHHHcCChh
Q 007758 294 N---MGLADLNLKDARGRTVLHVAAR--RKEPA-------VLETLLSKGACA-------SETTSDGRTAVAICRRMTRRK 354 (590)
Q Consensus 294 ~---~g~advn~~d~~G~TpLh~Aa~--~g~~~-------iv~~LL~~Gadv-------n~~d~~G~TpL~~A~~~~~~~ 354 (590)
+ .| +++|.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+||||+|+..|+.+
T Consensus 157 ~~~~~g-a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 157 ENPHQP-ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp HCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred hccccC-CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHH
Confidence 9 66 9999999999999999999 88888 999999999999 899999999999999999999
Q ss_pred hHHHHHhcCCCc
Q 007758 355 DYIEASKQGQET 366 (590)
Q Consensus 355 ~v~~l~~~G~~~ 366 (590)
+++.++++|..+
T Consensus 236 ~v~~Ll~~g~~~ 247 (256)
T 2etb_A 236 IFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhCCCCC
Confidence 999999998654
No 38
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.1e-29 Score=245.90 Aligned_cols=188 Identities=18% Similarity=0.117 Sum_probs=165.2
Q ss_pred CchHHHHHHHcCcH----HHHhccccccc-ccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIA-RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~-~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
+.||||+|+..|+. .|++.+.+++. ++..|.||||+|+..+ ..+++++|++ +|++++.....+..|+|||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ-AHEITSFLLS----KMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TCTTCCGGGCCCTTSCCHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcC-CHHHHHHHHh----ccccccccccCCCCCCCHH
Confidence 48999999999984 77888887765 8899999999999999 5556666653 5744443322234999999
Q ss_pred HHHHhcCCHHHHHHHHhCC---C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHH
Q 007758 249 HKALDSDDFELLNLLLNEY---E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAV 322 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g---~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~i 322 (590)
|+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKL 155 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999997 2 3678999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHhCC-CCCCcCCCCCCcHHHHHHHcCChhhHHHHH-hcCCCcc
Q 007758 323 LETLLSKG-ACASETTSDGRTAVAICRRMTRRKDYIEAS-KQGQETN 367 (590)
Q Consensus 323 v~~LL~~G-advn~~d~~G~TpL~~A~~~~~~~~v~~l~-~~G~~~~ 367 (590)
+++|+++| ++++.+|..|+||||+|+..|+.++++.++ +.|+++.
T Consensus 156 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 99999999 999999999999999999999999999999 8888764
No 39
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=7.5e-29 Score=242.67 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=168.0
Q ss_pred CchHHHHHHHcCcH----HHHhcc-cccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 174 VIPILVAALHCQLN----RLHSCC-IQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g-~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
..+|||.|+..|+. .|++.+ ..++.++..|.||||+|+..+ ..+++++|++ +|++++..|. .|+|||
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L 77 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAG-HTEIVEFLLQ----LGVPVNDKDD---AGWSPL 77 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHT-CHHHHHHHHH----TTCCSCCCCT---TSCCHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcC-cHHHHHHHHH----hCCCCCCcCC---CCCCHH
Confidence 37999999999984 555554 457788999999999999999 5555565553 6999999888 999999
Q ss_pred HHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 249 HKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
|+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 9999999999999999999 43 678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 325 TLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 325 ~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+|+++|++++.+|..|+||||+|+..++.+.++++++.|+++.
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999999998774
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=6.1e-30 Score=268.62 Aligned_cols=224 Identities=13% Similarity=0.056 Sum_probs=187.2
Q ss_pred ccccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCC
Q 007758 163 LILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVD 238 (590)
Q Consensus 163 ~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d 238 (590)
.+++..+..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+ ..+++++|++ +|++++.
T Consensus 11 ~~~~~~d~~g--~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~----~g~~~~~-- 81 (364)
T 3ljn_A 11 LNRIKSDDEN--MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFG-CVDTAKYLAS----VGEVHSL-- 81 (364)
T ss_dssp -----CCHHH--HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHC-CHHHHHHHHH----HCCCCCC--
T ss_pred CCccccCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC-CHHHHHHHHH----CCCCccc--
Confidence 4455545444 9999999999984 899999999999999999999999999 5666666664 5775543
Q ss_pred cccccCCcHHHHHHhcCCHHHHHHHHhC----C-C--------------------CCCCCccHHHHHHHcC--CHHHHHH
Q 007758 239 PMHEKRVRRIHKALDSDDFELLNLLLNE----Y-E--------------------VTLDDAFALHYAAAYC--NPKVFKE 291 (590)
Q Consensus 239 ~~~~~g~t~Lh~A~~~g~~~~v~~LL~~----g-~--------------------id~~G~TpLh~Aa~~g--~~~iv~~ 291 (590)
. .|.||||+|+..|+.++|++|++. | + .|..|.||||+|+..| +.++|++
T Consensus 82 ~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 82 W---HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI 158 (364)
T ss_dssp B---TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred c---CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 3 789999999999999999999998 4 2 3457999999999999 9999999
Q ss_pred HHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 292 VLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC-----ASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 292 LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad-----vn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
|++.| +++|.+|..|+||||+|+..|+.++|++|+++|++ +|.+|..|+||||+|+..|+.++++++++.|+++
T Consensus 159 Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 159 LVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp HHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred HHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99998 99999999999999999999999999999999999 9999999999999999999999999999999876
Q ss_pred chhhchHHHHHHHHHhcccCcCcccccccCCchhhhHHHHHhc-cccc-eeecccchhhHH
Q 007758 367 NKDWLCIAFLEREIRRNSMSGNLAMSADVMGDAFQMKLDYLEK-KVAG-VWLFPSEAREAM 425 (590)
Q Consensus 367 ~~~~~~~~~l~~~~~~~p~~~d~~~~~~~~~~~l~~~~~~le~-~v~~-~~l~~~ea~~~~ 425 (590)
... ...|.+.+ +.+... +..+ ++|+..++.+..
T Consensus 238 ~~~------------------------d~~g~tpL--~~A~~~g~~~~v~~Ll~~~~~~~~ 272 (364)
T 3ljn_A 238 NME------------------------DNEHTVPL--YLSVRAAMVLLTKELLQKTDVFLI 272 (364)
T ss_dssp TCC------------------------CTTSCCHH--HHHHHTCCHHHHHHHHHHSCHHHH
T ss_pred CCC------------------------CCCCCCHH--HHHHHhChHHHHHHHHHcCCchhh
Confidence 321 12344555 555555 7777 888887776543
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=3e-29 Score=235.72 Aligned_cols=152 Identities=23% Similarity=0.260 Sum_probs=132.5
Q ss_pred chHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHH
Q 007758 175 IPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHK 250 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~ 250 (590)
.+.|+.|+..|+. .|+++|+|+|.+|..|.||||+|+..+.. .+++++++ +|++++..|. .|+||||+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~-~~~~~ll~----~gad~~~~d~---~g~TpLh~ 76 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHK-EVVKLLIS----KGADVNAKDS---DGRTPLHH 76 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHH----TTCCTTCCCT---TSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHh----cccchhhhcc---CCCCHHHH
Confidence 3578899999984 88899999999999999999999998844 44444443 7999999988 99999999
Q ss_pred HHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 007758 251 ALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETL 326 (590)
Q Consensus 251 A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~L 326 (590)
|+..|+.++|++|+++| ++ |.+|+||||+|+..|+.++|++||+.| ++++.+|..|+||||+|+.+|+.+++++|
T Consensus 77 A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 77 AAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 54 678999999999999999999999998 99999999999999999999999999999
Q ss_pred HhCCCCCCc
Q 007758 327 LSKGACASE 335 (590)
Q Consensus 327 L~~Gadvn~ 335 (590)
+++||+++.
T Consensus 156 l~~GA~ie~ 164 (169)
T 4gpm_A 156 EKQGGWLEH 164 (169)
T ss_dssp HTC------
T ss_pred HHCCCCcCC
Confidence 999999874
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.2e-29 Score=256.35 Aligned_cols=186 Identities=17% Similarity=0.148 Sum_probs=168.8
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
+.||||.|+..|+. .|+++|++++..+..|.||||+|+..+ ..+++++|++ +|++++..|. .|+||||
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~----~ga~~~~~~~---~g~tpL~ 111 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDD-NVDMVKFLVE----NGANINQPDN---EGWIPLH 111 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC-CHHHHHHHHH----CCCCCCCCCC---CCCcHHH
Confidence 38999999999984 889999999999999999999999999 5566666663 6999999988 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccc-----------------------
Q 007758 250 KALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNL----------------------- 302 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~----------------------- 302 (590)
+|+..|+.++|++|+++| + .|..|.||||+|+..++.++++.|+...+++++.
T Consensus 112 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (299)
T 1s70_B 112 AAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN 191 (299)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcc
Confidence 999999999999999999 4 3688999999999999999999888765566543
Q ss_pred ---cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 303 ---KDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 303 ---~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
.+..|+||||+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.++++++++.|+++.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259 (299)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 57789999999999999999999999999999999999999999999999999999999998764
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.6e-29 Score=254.74 Aligned_cols=195 Identities=18% Similarity=0.172 Sum_probs=155.6
Q ss_pred ccccccCCCCCCchHHHHHHHcCcH----HHHh----cccccc----cccCCCccccccccCc---cchhHHHHHHhhhc
Q 007758 163 LILAENAPVEDVIPILVAALHCQLN----RLHS----CCIQRI----ARSNLDNVCLEKELPD---EVSSEIKSLRVKSN 227 (590)
Q Consensus 163 ~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~----~g~di~----~~d~~g~t~L~~A~~~---~~~~~i~~lL~~~~ 227 (590)
+..+..+..+ .||||.|+..|+. .|++ .+++++ .++..|.||||+|+.. + ..+++++|++
T Consensus 4 a~~~~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g-~~~~v~~Ll~-- 78 (273)
T 2pnn_A 4 AGEKPPRLYD--RRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNG-QNDTIALLLD-- 78 (273)
T ss_dssp -------CCC--HHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTT-BCHHHHHHHH--
T ss_pred ccCCCCCccc--chHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcC-ChHHHHHHHH--
Confidence 3444444444 8999999999874 4554 455554 3577899999999864 6 4556666654
Q ss_pred cccCCCc-------CC--CCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CC--------------CCccHHHHH
Q 007758 228 QESEANI-------KE--VDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TL--------------DDAFALHYA 280 (590)
Q Consensus 228 ~~~Gadi-------n~--~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~--------------~G~TpLh~A 280 (590)
+|+++ +. .+ .+..|+||||+|+..|+.++|++|+++| ++ +. .|+||||+|
T Consensus 79 --~ga~~~~~~~~i~~~~~~-~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A 155 (273)
T 2pnn_A 79 --VARKTDSLKQFVNASYTD-SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLA 155 (273)
T ss_dssp --HHHHTTCHHHHHTCCCCS-TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHH
T ss_pred --hhccccchhHHhhccccc-ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHH
Confidence 35442 22 11 2348999999999999999999999999 54 33 699999999
Q ss_pred HHcCCHHHHHHHHH---cCCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCC-------cCCCCCC
Q 007758 281 AAYCNPKVFKEVLN---MGLADLNLKDARGRTVLHVAARRKE---------PAVLETLLSKGACAS-------ETTSDGR 341 (590)
Q Consensus 281 a~~g~~~iv~~LL~---~g~advn~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Gadvn-------~~d~~G~ 341 (590)
+..|+.++|++||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|+++| .+|..|+
T Consensus 156 ~~~g~~~~v~~Ll~~~~~g-ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 156 ACTNQLAIVKFLLQNSWQP-ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp HHTTCHHHHHHHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSC
T ss_pred HHcCCHHHHHHHHhcccCC-CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCC
Confidence 99999999999999 76 9999999999999999999998 899999999999997 4899999
Q ss_pred cHHHHHHHcCChhhHHHHHhcCC-Cc
Q 007758 342 TAVAICRRMTRRKDYIEASKQGQ-ET 366 (590)
Q Consensus 342 TpL~~A~~~~~~~~v~~l~~~G~-~~ 366 (590)
||||+|+..|+.++++++++.|+ +|
T Consensus 235 TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 235 TPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred CHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 99999999999999999999998 44
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=5e-30 Score=266.31 Aligned_cols=192 Identities=17% Similarity=0.081 Sum_probs=157.6
Q ss_pred HHHHHHhcCCceeeeecccccccccc-cCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccc-
Q 007758 142 LIYACAAFQITELVSYFQCLLLILAE-NAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEV- 215 (590)
Q Consensus 142 lL~~A~~~~~~elv~~Ll~~g~din~-~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~- 215 (590)
.++++...++.+++++|++.|+++|. ++..+ .||||+|+..|+. .|+++|++++.++..|.||||+|+..+.
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g--~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHG--NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSCCSTTC--CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccccCCCC--CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccc
Confidence 34566666777899999999999999 77777 9999999999984 8999999999999999999999999763
Q ss_pred --hhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHh----cCCHHHHHHHHhC--------------------C-C
Q 007758 216 --SSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALD----SDDFELLNLLLNE--------------------Y-E 268 (590)
Q Consensus 216 --~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~----~g~~~~v~~LL~~--------------------g-~ 268 (590)
...+..++. . .+++++..|. .|+||||+|+. .|+.+++++|++. | +
T Consensus 178 ~~~~~~~~ll~-~---~~~~~~~~d~---~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~ 250 (327)
T 1sw6_A 178 YDSGTFEALLD-Y---LYPCLILEDS---MNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 250 (327)
T ss_dssp HHTTCHHHHHH-H---HGGGGGEECT---TCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred ccHHHHHHHHH-h---hhccccCCCC---CCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence 233333333 2 1256888877 99999999999 8999999999986 5 2
Q ss_pred ---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHH
Q 007758 269 ---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVA 345 (590)
Q Consensus 269 ---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~ 345 (590)
.+..|+||||+|+. +++|++. ++|.+|..|+||||+|+..|+.++|++||++||+++.+|.+|+||||
T Consensus 251 ~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 321 (327)
T 1sw6_A 251 PNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321 (327)
T ss_dssp ---------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred cccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 36789999999995 8999987 59999999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 007758 346 ICRRMT 351 (590)
Q Consensus 346 ~A~~~~ 351 (590)
+|++.|
T Consensus 322 ~A~~~g 327 (327)
T 1sw6_A 322 FGAGLE 327 (327)
T ss_dssp GTCC--
T ss_pred HHHhcC
Confidence 998764
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=2.9e-29 Score=247.10 Aligned_cols=199 Identities=15% Similarity=0.078 Sum_probs=170.7
Q ss_pred HHHHHHHhcCCceeeeecccccc----cccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccC
Q 007758 141 ELIYACAAFQITELVSYFQCLLL----ILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELP 212 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~----din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~ 212 (590)
++|++|+..+..+++++|++.+. +++.++..+ .||||+|+..++. .|+++|++++.++..|.||||+|+.
T Consensus 10 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 87 (236)
T 1ikn_D 10 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQ--QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACE 87 (236)
T ss_dssp CTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTC--CCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHH
T ss_pred chhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 56999999999999999999875 678777655 9999999999985 7778999999999999999999999
Q ss_pred ccchhHHHHHHhhhccccCCC------cCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CC-CCccHHHHHH
Q 007758 213 DEVSSEIKSLRVKSNQESEAN------IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TL-DDAFALHYAA 281 (590)
Q Consensus 213 ~~~~~~i~~lL~~~~~~~Gad------in~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~-~G~TpLh~Aa 281 (590)
.+ ...++++|++ +|++ ++..+. .|.||||+|+..|+.++|++|+++| ++ +. .|+||||+|+
T Consensus 88 ~~-~~~~v~~Ll~----~~~~~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 88 QG-CLASVGVLTQ----SCTTPHLHSILKATNY---NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 159 (236)
T ss_dssp HT-CHHHHHHHHH----STTTTSSSCGGGCCCT---TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH
T ss_pred cC-CHHHHHHHHh----cccchhHHHHhhccCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence 88 5555555553 4655 344444 8999999999999999999999999 44 44 8999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC--cCCCCCCcHHHHHHHc
Q 007758 282 AYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACAS--ETTSDGRTAVAICRRM 350 (590)
Q Consensus 282 ~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn--~~d~~G~TpL~~A~~~ 350 (590)
..|+.++|++|++.| ++++.+|..|+||||+|+.+|+.+++++|+++|+++. ..+..|.||.+.+...
T Consensus 160 ~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 160 DLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999998 9999999999999999999999999999999999876 7789999988766543
No 46
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1.1e-28 Score=246.42 Aligned_cols=183 Identities=19% Similarity=0.238 Sum_probs=154.2
Q ss_pred chHHHHHHHcCcH--------HHHhccccccccc----CCCcccccccc---CccchhHHHHHHhhhccccCCC------
Q 007758 175 IPILVAALHCQLN--------RLHSCCIQRIARS----NLDNVCLEKEL---PDEVSSEIKSLRVKSNQESEAN------ 233 (590)
Q Consensus 175 ~t~Lh~A~~~g~~--------~Ll~~g~di~~~d----~~g~t~L~~A~---~~~~~~~i~~lL~~~~~~~Gad------ 233 (590)
+++||.|+..|+. .|++.|++++..+ ..|.||||+|+ ..+ ..+++++|++. |++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g-~~~~v~~Ll~~----g~~~~~~~~ 80 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAG-RNDTIPILLDI----AEKTGNMRE 80 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTT-BCTHHHHHHHH----HHHTTCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcC-CHHHHHHHHHh----cccccchHh
Confidence 7888888888874 3334888888766 56888888877 456 45555555533 433
Q ss_pred -----cCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---C--------------CCCccHHHHHHHcCCHHHHH
Q 007758 234 -----IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T--------------LDDAFALHYAAAYCNPKVFK 290 (590)
Q Consensus 234 -----in~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d--------------~~G~TpLh~Aa~~g~~~iv~ 290 (590)
++..| ..|+||||+|+..|+.++|++|+++| ++ + ..|+||||+|+..|+.++|+
T Consensus 81 ~~~~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 157 (260)
T 3jxi_A 81 FINSPFRDVY---YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVH 157 (260)
T ss_dssp HHTCCBCCSS---EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHH
T ss_pred hhcccccccc---cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 33334 39999999999999999999999999 44 3 46999999999999999999
Q ss_pred HHHH---cCCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCC-------CcCCCCCCcHHHHHHHcC
Q 007758 291 EVLN---MGLADLNLKDARGRTVLHVAARRKE---------PAVLETLLSKGACA-------SETTSDGRTAVAICRRMT 351 (590)
Q Consensus 291 ~LL~---~g~advn~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Gadv-------n~~d~~G~TpL~~A~~~~ 351 (590)
+||+ .| +++|.+|..|+||||+|+..|+ .+++++|+++|+++ +.+|..|+||||+|+..|
T Consensus 158 ~Ll~~~~~g-a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 158 YLTENGHKQ-ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHHHCSSCC-CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHhccccC-CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 9999 76 9999999999999999999888 79999999999999 679999999999999999
Q ss_pred ChhhHHHHHhcCCCc
Q 007758 352 RRKDYIEASKQGQET 366 (590)
Q Consensus 352 ~~~~v~~l~~~G~~~ 366 (590)
+.++++.++++|..+
T Consensus 237 ~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 237 KIGIFQHIIRREIAD 251 (260)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCc
Confidence 999999999998654
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.1e-28 Score=232.11 Aligned_cols=159 Identities=19% Similarity=0.173 Sum_probs=145.0
Q ss_pred cccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CC
Q 007758 196 RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TL 271 (590)
Q Consensus 196 i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~ 271 (590)
++.+|..|.||||+|+..+ ...++++|++ +|++++..+. .|+||||+|+..|+.+++++|+++| ++ |.
T Consensus 28 ~n~~d~~g~t~L~~A~~~g-~~~~v~~Ll~----~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 99 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLG-MENAIDKLVE----NFDKLEDKDI---EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF 99 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHT-CGGGHHHHHH----HHCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred HhCcCCCCCCHHHHHHHcC-CHHHHHHHHH----hccccccccc---cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 5678888999999999888 4444454443 5889998887 9999999999999999999999999 43 67
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcC
Q 007758 272 DDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMT 351 (590)
Q Consensus 272 ~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~ 351 (590)
.|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhC
Confidence 8999999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhcC
Q 007758 352 RRKDYIEASKQG 363 (590)
Q Consensus 352 ~~~~v~~l~~~G 363 (590)
+.++++++.+.|
T Consensus 179 ~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 179 RQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHhcc
Confidence 999999998875
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=9.5e-28 Score=233.51 Aligned_cols=185 Identities=15% Similarity=0.041 Sum_probs=168.5
Q ss_pred hhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcH----HHHhccc-ccccccCCCccccccccCc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLN----RLHSCCI-QRIARSNLDNVCLEKELPD 213 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~-di~~~d~~g~t~L~~A~~~ 213 (590)
..++|++|+..+..+++++|+++|++++.++..+ .||||+|+..++. .|++++. +++.++..|.||||+|+..
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 102 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANIQDNMG--RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 102 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence 3468999999999999999999999999887766 9999999999984 7888887 8999999999999999998
Q ss_pred cchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHH
Q 007758 214 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVF 289 (590)
Q Consensus 214 ~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv 289 (590)
+ ...++++|++ +|++++..+. .|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++
T Consensus 103 ~-~~~~~~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 174 (223)
T 2f8y_A 103 A-VEGMLEDLIN----SHADVNAVDD---LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174 (223)
T ss_dssp T-CHHHHHHHHH----TTCCTTCBCT---TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred C-cHHHHHHHHH----cCCCCcCcCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHH
Confidence 8 5556666653 6999999887 9999999999999999999999999 43 67899999999999999999
Q ss_pred HHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 007758 290 KEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACAS 334 (590)
Q Consensus 290 ~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn 334 (590)
++|++.| ++++.+|..|+||||+|+.+|+.+++++|+++|+...
T Consensus 175 ~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 175 KVLLDHF-ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHHHHcC-CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 9999998 9999999999999999999999999999999999754
No 49
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=247.30 Aligned_cols=181 Identities=17% Similarity=0.109 Sum_probs=159.9
Q ss_pred chHHHHHHHcCcH----HHHhcccc--cccccCCCccccccccCccchhHHHHHHhhhccccCC-CcCCCCcccccCCcH
Q 007758 175 IPILVAALHCQLN----RLHSCCIQ--RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEA-NIKEVDPMHEKRVRR 247 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~g~d--i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Ga-din~~d~~~~~g~t~ 247 (590)
.+++|.|+..+.. .+++.+++ +|.+|..|.||||+|+..+ ...++++|++ +|+ +++..+. .|.||
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g-~~~~v~~Ll~----~g~~~~~~~~~---~g~tp 148 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHA-NFPVVQQLLD----SGVCKVDKQNR---AGYSP 148 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TSCCCTTCCCT---TSCCH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCC-CHHHHHHHHH----CCCCcCCCCCC---CCCCH
Confidence 4566777777663 55566666 8889999999999999998 5555565553 587 8888888 99999
Q ss_pred HHHHH-----hcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Q 007758 248 IHKAL-----DSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (590)
Q Consensus 248 Lh~A~-----~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g 318 (590)
||+|+ ..++.+++++|++.| . .+..|+||||+|+..|+.++|++||+.| +++|.+|..|+||||+|+..|
T Consensus 149 L~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 149 IMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp HHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHHHHHHHCC
Confidence 99999 678999999999999 2 3567999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHh-CCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 319 EPAVLETLLS-KGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 319 ~~~iv~~LL~-~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
+.++|++|++ .|++++.+|..|+||||+|+..|+.++++.+++++.
T Consensus 228 ~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 228 HKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999999999 899999999999999999999999999999998753
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=7.4e-28 Score=230.41 Aligned_cols=182 Identities=16% Similarity=0.100 Sum_probs=163.7
Q ss_pred hhHHHHHHHhcCCceeeeecccccc-cccccCCCCCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCc
Q 007758 139 AVELIYACAAFQITELVSYFQCLLL-ILAENAPVEDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPD 213 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g~-din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~ 213 (590)
..++|+.|+..+..+.+..++..+. +++..+..+ .||||+|+..++. .|+++|++++.++..|.||||+|+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g--~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEG--NTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCC--CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 4467999999999999888888775 999877766 9999999999984 88999999999999999999999999
Q ss_pred cchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC--C---CCCCCccHHHHHHHcCC---
Q 007758 214 EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY--E---VTLDDAFALHYAAAYCN--- 285 (590)
Q Consensus 214 ~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g--~---id~~G~TpLh~Aa~~g~--- 285 (590)
+ ..+++++|++. .|++++..+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+|+..++
T Consensus 83 ~-~~~~~~~Ll~~---~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 83 G-RTEILAYMLKH---ATPDLNKHNR---YGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQ 155 (201)
T ss_dssp T-CHHHHHHHHHH---SCCCTTCCCT---TSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSH
T ss_pred C-CHHHHHHHHhc---cCcccccccC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchh
Confidence 8 55666666544 6788988887 9999999999999999999999998 3 36789999999999998
Q ss_pred --HHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 007758 286 --PKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (590)
Q Consensus 286 --~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G 330 (590)
.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 156 ~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 156 LYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999998 999999999999999999999999999999987
No 51
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=6.9e-28 Score=236.19 Aligned_cols=190 Identities=11% Similarity=0.015 Sum_probs=164.7
Q ss_pred hHHHHHHHhcCCceeeeecccc-cccccccCCCCCCchHHHHHHHcCcH----HHHhccccc-----ccccCCCcccccc
Q 007758 140 VELIYACAAFQITELVSYFQCL-LLILAENAPVEDVIPILVAALHCQLN----RLHSCCIQR-----IARSNLDNVCLEK 209 (590)
Q Consensus 140 lelL~~A~~~~~~elv~~Ll~~-g~din~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~di-----~~~d~~g~t~L~~ 209 (590)
.++|++|+..+..+++++|++. |++++.++..+ .||||+|+..|+. .|+++|+++ +.++..|.||||+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMG--ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTS--CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC--CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 3579999999999999999998 99999987766 9999999999984 888999987 6677889999999
Q ss_pred ccCccchhHHHHHHhhhccccCCCcCCCCc----------ccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCcc
Q 007758 210 ELPDEVSSEIKSLRVKSNQESEANIKEVDP----------MHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAF 275 (590)
Q Consensus 210 A~~~~~~~~i~~lL~~~~~~~Gadin~~d~----------~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~T 275 (590)
|+..+ ..+++++|++ +|++++..+. .+..|.||||+|+..|+.+++++|+++| + .|..|+|
T Consensus 82 A~~~~-~~~~v~~Ll~----~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 156 (232)
T 2rfa_A 82 AVINQ-NVNLVRALLA----RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNT 156 (232)
T ss_dssp HHHTT-CHHHHHHHHH----TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHcC-CHHHHHHHHh----CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 99998 5556666653 6999988763 1337999999999999999999999999 4 3788999
Q ss_pred HHHHHHHcCCHHHH----HHHHHcCCCCc------cccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCC
Q 007758 276 ALHYAAAYCNPKVF----KEVLNMGLADL------NLKDARGRTVLHVAARRKEPAVLETLLSKGACASETT 337 (590)
Q Consensus 276 pLh~Aa~~g~~~iv----~~LL~~g~adv------n~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d 337 (590)
|||+|+..|+.+++ ++|++.| +++ +.+|..|+||||+|+..|+.+++++|+++|+......
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 99999999999988 9999998 887 6899999999999999999999999999998766543
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.5e-27 Score=219.50 Aligned_cols=155 Identities=17% Similarity=0.158 Sum_probs=141.1
Q ss_pred CCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHH
Q 007758 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (590)
Q Consensus 202 ~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpL 277 (590)
.|.||||.|+..+....+..++. .|++++..|. .|.||||+|+..|+.+++++|+++| + .|..|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~-----~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE-----QENVINHTDE---EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH-----HSSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHH-----cCCCcCCCCC---CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 47889999998884544444444 5888888887 9999999999999999999999999 4 367899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHH
Q 007758 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (590)
Q Consensus 278 h~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~ 357 (590)
|+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCC
Q 007758 358 EASKQGQE 365 (590)
Q Consensus 358 ~l~~~G~~ 365 (590)
.+.+.+..
T Consensus 153 ~L~~~~~~ 160 (167)
T 3v31_A 153 VIESHLLK 160 (167)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
No 53
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.95 E-value=4.2e-27 Score=230.38 Aligned_cols=186 Identities=13% Similarity=0.113 Sum_probs=167.7
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
+.++|+.|+..|.. .|++.|++++.++..|.||||+|+..+ ..+++++|++ +|++++..+. ..|.||||
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~~~~~~~~~~--~~~~t~L~ 81 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINN-RIDLVKYYIS----KGAIVDQLGG--DLNSTPLH 81 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCBT--TTTBCHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhC-CHHHHHHHHH----cCCcchhhcC--CcCCChhH
Confidence 38999999999984 889999999999999999999999999 5555666653 5887776543 35999999
Q ss_pred HHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCC-HHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKE-PAVLE 324 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~-~~iv~ 324 (590)
+|+..|+.+++++|++.| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++ .++++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 160 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHSVDPTR 160 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCSSTTHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCChHHHHH
Confidence 999999999999999999 4 3678999999999999999999999998 9999999999999999997776 89999
Q ss_pred HHHhCCCCCCcCCC-CCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 325 TLLSKGACASETTS-DGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 325 ~LL~~Gadvn~~d~-~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
+|++.|++++..+. .|+||||+|+..|+.+.++.+++.|+++.
T Consensus 161 ~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 161 LLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp HHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999987 99999999999999999999999998764
No 54
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=6.6e-28 Score=240.33 Aligned_cols=188 Identities=15% Similarity=0.185 Sum_probs=161.0
Q ss_pred hhHHHHHHHhcCCce----eeeecccccccccc----cCCCCCCchHHHHHHHc---Cc----HHHHhccccccccc---
Q 007758 139 AVELIYACAAFQITE----LVSYFQCLLLILAE----NAPVEDVIPILVAALHC---QL----NRLHSCCIQRIARS--- 200 (590)
Q Consensus 139 ~lelL~~A~~~~~~e----lv~~Ll~~g~din~----~~~~~~~~t~Lh~A~~~---g~----~~Ll~~g~di~~~d--- 200 (590)
..++|+.|+..|..+ +++++++.|++++. ++..+ .||||+|+.. |+ +.|+++|++++..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g--~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTG--KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTT--BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCC--CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 457899999999887 45666678999997 67666 9999999998 76 49999999887433
Q ss_pred --------CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcc----------cccCCcHHHHHHhcCCHHHHHH
Q 007758 201 --------NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPM----------HEKRVRRIHKALDSDDFELLNL 262 (590)
Q Consensus 201 --------~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~----------~~~g~t~Lh~A~~~g~~~~v~~ 262 (590)
..|.||||+|+..+ ..+++++|++ +|++++..+.. +..|.||||+|+..|+.++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKR-SLQCVKLLVE----NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred ccccccccccCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 67999999999999 5666666653 69999998861 1129999999999999999999
Q ss_pred HHh---CC-CC---CCCCccHHHHHHH--cCCHH-------HHHHHHHcCCCCc-------cccCCCCCcHHHHHHHcCC
Q 007758 263 LLN---EY-EV---TLDDAFALHYAAA--YCNPK-------VFKEVLNMGLADL-------NLKDARGRTVLHVAARRKE 319 (590)
Q Consensus 263 LL~---~g-~i---d~~G~TpLh~Aa~--~g~~~-------iv~~LL~~g~adv-------n~~d~~G~TpLh~Aa~~g~ 319 (590)
|++ .| ++ |..|+||||+|+. .++.+ ++++|++.| +++ |.+|..|+||||+|+..|+
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-ARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-CCcccccccccccCCCCCCHHHHHHHhCC
Confidence 999 88 43 7789999999999 78888 999999998 999 9999999999999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 007758 320 PAVLETLLSKGACAS 334 (590)
Q Consensus 320 ~~iv~~LL~~Gadvn 334 (590)
.+++++||++|++..
T Consensus 234 ~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 234 IEIFRHILQREFSGA 248 (256)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCC
Confidence 999999999987653
No 55
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=6.1e-27 Score=218.76 Aligned_cols=154 Identities=22% Similarity=0.220 Sum_probs=137.8
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccH
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFA 276 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~Tp 276 (590)
..+.++|++|+..+ ..+++++|++ +|++++..|. .|.||||+|+..|+.+++++|+++| ++ |..|+||
T Consensus 12 ~~~~~~l~~A~~~g-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 83 (169)
T 2y1l_E 12 SDLGKKLLEAARAG-RDDEVRILMA----NGADVNAEDA---SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTP 83 (169)
T ss_dssp -CHHHHHHHHHHHT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CcccchHHHHHHcC-CHHHHHHHHH----CCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 34567788888777 4444444442 6999998887 9999999999999999999999999 43 6789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhH
Q 007758 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (590)
Q Consensus 277 Lh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v 356 (590)
||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 007758 357 IEASKQG 363 (590)
Q Consensus 357 ~~l~~~G 363 (590)
+++.+.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9999876
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=4e-27 Score=217.56 Aligned_cols=153 Identities=19% Similarity=0.157 Sum_probs=121.1
Q ss_pred CccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHH
Q 007758 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALH 278 (590)
Q Consensus 203 g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh 278 (590)
..||||.|+..+ ..++++.|++ +|++++..+. .|+||||+|+. |+.+++++|++.| ++ |..|+||||
T Consensus 5 ~~~~L~~A~~~g-~~~~v~~Ll~----~~~~~~~~~~---~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAARG-DLEQLTSLLQ----NNVNVNAQNG---FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIH 75 (162)
T ss_dssp CHHHHHHHHHHT-CHHHHHHHTT----SCCCTTCCCT---TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HhhHHHHHHHcC-CHHHHHHHHh----CCCCccccCc---cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 456666676666 3334443332 5778877777 88888888888 8888888888888 43 567888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCcCCCCCCcHHHHHHHcCChhhHH
Q 007758 279 YAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC-ASETTSDGRTAVAICRRMTRRKDYI 357 (590)
Q Consensus 279 ~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpL~~A~~~~~~~~v~ 357 (590)
+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 888888888888888887 88888888888888888888888888888888887 5888888888888888888888888
Q ss_pred HHHhcCCC
Q 007758 358 EASKQGQE 365 (590)
Q Consensus 358 ~l~~~G~~ 365 (590)
++++.|++
T Consensus 155 ~Ll~~GAd 162 (162)
T 1ihb_A 155 LMQANGAG 162 (162)
T ss_dssp HHHHTC--
T ss_pred HHHHhCCC
Confidence 88888863
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=9.7e-28 Score=249.07 Aligned_cols=202 Identities=16% Similarity=0.105 Sum_probs=157.7
Q ss_pred CceeeeecccccccccccCCCCCCchHHHHHHHcCc----HHHHhccccccccc-----------------CCCcccccc
Q 007758 151 ITELVSYFQCLLLILAENAPVEDVIPILVAALHCQL----NRLHSCCIQRIARS-----------------NLDNVCLEK 209 (590)
Q Consensus 151 ~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~----~~Ll~~g~di~~~d-----------------~~g~t~L~~ 209 (590)
..+++++|+++|++++.++..+ .++++ |+ +.|+++|++++... ....+.+|.
T Consensus 31 ~~dlv~~ll~~ga~i~~~~~~g--~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 103 (327)
T 1sw6_A 31 THDLTSDFLSSPLKIMKALPSP--VVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 103 (327)
T ss_dssp CTTCCCSTTTSSCCCEECBCCC--CCCCH-----HHHHHHHHHHHHHHC-------------------------------
T ss_pred cCchHHHHhhCCcccccCCCCC--CcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHH
Confidence 3578999999999999988766 88876 43 38888998865411 111122344
Q ss_pred ccCccchhHHHHHHhhhccccCCCcCC-CCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcC
Q 007758 210 ELPDEVSSEIKSLRVKSNQESEANIKE-VDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYC 284 (590)
Q Consensus 210 A~~~~~~~~i~~lL~~~~~~~Gadin~-~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g 284 (590)
|+... ...++++|. ++|+++|. .|. .|+||||+|+..|+.++|++||++| ++ |..|+||||+|+.+|
T Consensus 104 a~~~~-~~~~~~~l~----~~g~dvn~~~d~---~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 104 SFDSL-LQEVNDAFP----NTQLNLNIPVDE---HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 175 (327)
T ss_dssp CHHHH-HHHHHHHCT----TSCCCSCSCCST---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSS
T ss_pred HHHhh-HHHHHHHHH----hcCCCcccccCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhc
Confidence 44333 444444444 47999998 787 9999999999999999999999999 44 678999999999998
Q ss_pred C---HHHHHHHHHcCCCCccccCCCCCcHHHHHHH----cCCHHHHHHHHhCCC--------------------------
Q 007758 285 N---PKVFKEVLNMGLADLNLKDARGRTVLHVAAR----RKEPAVLETLLSKGA-------------------------- 331 (590)
Q Consensus 285 ~---~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~----~g~~~iv~~LL~~Ga-------------------------- 331 (590)
+ .++++.|++.+.++++.+|..|+||||+|+. .|+.+++++|++.++
T Consensus 176 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 255 (327)
T 1sw6_A 176 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKN 255 (327)
T ss_dssp HHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------------
T ss_pred ccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccc
Confidence 8 7888899988768899999999999999998 899999999988743
Q ss_pred -------------------CCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 332 -------------------CASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 332 -------------------dvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
++|.+|..|+||||+|+..|+.+++++|++.|+++.
T Consensus 256 ~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 256 GERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp ----CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred ccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 578888999999999999999999999999998764
No 58
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=2.4e-27 Score=238.70 Aligned_cols=201 Identities=15% Similarity=0.152 Sum_probs=156.0
Q ss_pred hhHHHHHHHhcCCceeeeeccccc----cccccc--CCCCCCchHHHHHHHc---Cc----HHHHhcccc-------ccc
Q 007758 139 AVELIYACAAFQITELVSYFQCLL----LILAEN--APVEDVIPILVAALHC---QL----NRLHSCCIQ-------RIA 198 (590)
Q Consensus 139 ~lelL~~A~~~~~~elv~~Ll~~g----~din~~--~~~~~~~t~Lh~A~~~---g~----~~Ll~~g~d-------i~~ 198 (590)
..++|+.|+..+..++++.|++.+ .+++.. .....+.||||+|+.. |+ +.|+++|++ ++.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 458899999999999999998754 444321 1133459999999986 65 488999876 333
Q ss_pred ----ccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCc-----------ccccCCcHHHHHHhcCCHHHHHHH
Q 007758 199 ----RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-----------MHEKRVRRIHKALDSDDFELLNLL 263 (590)
Q Consensus 199 ----~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~-----------~~~~g~t~Lh~A~~~g~~~~v~~L 263 (590)
++..|.||||+|+..+ ..+++++|++ +|++++..+. .+..|.||||+|+..|+.++|++|
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g-~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERR-NMTLVTLLVE----NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHcC-CHHHHHHHHH----CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 5668999999999999 5666666664 6999998773 112699999999999999999999
Q ss_pred Hh---CC-CC---CCCCccHHHHHHHcCC---------HHHHHHHHHcCCCCcc-------ccCCCCCcHHHHHHHcCCH
Q 007758 264 LN---EY-EV---TLDDAFALHYAAAYCN---------PKVFKEVLNMGLADLN-------LKDARGRTVLHVAARRKEP 320 (590)
Q Consensus 264 L~---~g-~i---d~~G~TpLh~Aa~~g~---------~~iv~~LL~~g~advn-------~~d~~G~TpLh~Aa~~g~~ 320 (590)
++ .| ++ |..|+||||+|+..|+ .+++++|++.| +++| .+|..|+||||+|+..|+.
T Consensus 168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-AKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-hhcccccccccccCCCCCCHHHHHHHhChH
Confidence 99 78 43 6789999999999998 89999999998 9997 4899999999999999999
Q ss_pred HHHHHHHhCCC-CCCcCCCCCCcHHH
Q 007758 321 AVLETLLSKGA-CASETTSDGRTAVA 345 (590)
Q Consensus 321 ~iv~~LL~~Ga-dvn~~d~~G~TpL~ 345 (590)
+++++||++|| |+......+.+|-+
T Consensus 247 ~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 247 GVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHTC--------------
T ss_pred HHHHHHHHCCCCCchhhhhhhhhccC
Confidence 99999999999 88888888777644
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=9.9e-27 Score=217.48 Aligned_cols=156 Identities=19% Similarity=0.178 Sum_probs=139.0
Q ss_pred CccccccccCccchhHHHHHHhhhccccCCC-cCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHH
Q 007758 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEAN-IKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFAL 277 (590)
Q Consensus 203 g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gad-in~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpL 277 (590)
+.||||.|+..+....+..++. .|.+ ++..+. .|+||||+|+..|+.++|++|+++| ++ |..|+|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~-----~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLR-----KGDNLVNKPDE---RGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHT-----TCSGGGGCCCT---TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred chhhHHHHHHcCCHHHHHHHHH-----cCcccccCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHH
Confidence 4688888888885555555554 4544 677776 9999999999999999999999999 43 67899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHH
Q 007758 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYI 357 (590)
Q Consensus 278 h~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~ 357 (590)
|+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 74 SLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcc
Q 007758 358 EASKQGQETN 367 (590)
Q Consensus 358 ~l~~~G~~~~ 367 (590)
.+.+.|....
T Consensus 153 ~L~~~~~~~~ 162 (172)
T 3v30_A 153 VIENHILKLF 162 (172)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHh
Confidence 9999886543
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=5.7e-27 Score=217.57 Aligned_cols=156 Identities=17% Similarity=0.183 Sum_probs=134.5
Q ss_pred cCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCcc
Q 007758 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAF 275 (590)
Q Consensus 200 d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~T 275 (590)
+..|.|+||.|+..+... +++.|++. .+.+++..+. .|+||||+|+..|+.+++++|+++| + .|..|+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~-~v~~ll~~---~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 77 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVE-TVKKLCTV---QSVNCRDIEG---RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLV 77 (165)
T ss_dssp -CHHHHHHHHHHHHTCHH-HHHHHCCT---TTTTCCCTTT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cchhhHHHHHHHHhCCHH-HHHHHHHc---CCCCcccccc---CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCC
Confidence 455677888887777344 44444322 3556666666 8999999999999999999999999 4 3678999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhh
Q 007758 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKD 355 (590)
Q Consensus 276 pLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~ 355 (590)
|||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. ++.++
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred HHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHH
Confidence 999999999999999999998 9999999999999999999999999999999999999999999999999877 89999
Q ss_pred HHHHHhcCC
Q 007758 356 YIEASKQGQ 364 (590)
Q Consensus 356 v~~l~~~G~ 364 (590)
++++.+.|+
T Consensus 156 ~~~L~~~gA 164 (165)
T 3twr_A 156 QDLLRGDAA 164 (165)
T ss_dssp HHHHHTC--
T ss_pred HHHHhhccc
Confidence 999998885
No 61
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.2e-26 Score=218.82 Aligned_cols=160 Identities=20% Similarity=0.203 Sum_probs=141.2
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccH
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFA 276 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~Tp 276 (590)
..+.++||.|+..+....+..++. . .+.+++..+. .|+||||+|+..|+.+++++|++.| ++ |..|+||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~-~---~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 75 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLD-N---TENDLNQGDD---HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHH-C---TTSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHh-c---CcccccccCC---CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 346788899988884555554444 2 4677888887 9999999999999999999999999 44 6789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhH
Q 007758 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDY 356 (590)
Q Consensus 277 Lh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v 356 (590)
||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++...+
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcch
Q 007758 357 IEASKQGQETNK 368 (590)
Q Consensus 357 ~~l~~~G~~~~~ 368 (590)
+.+.+.|+++..
T Consensus 155 ~~L~~~g~~~~~ 166 (179)
T 3f6q_A 155 ERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHTTCCCSC
T ss_pred HHHHHhhcCccc
Confidence 999999998753
No 62
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=3.1e-26 Score=210.24 Aligned_cols=146 Identities=24% Similarity=0.191 Sum_probs=128.2
Q ss_pred ccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHH
Q 007758 204 NVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHY 279 (590)
Q Consensus 204 ~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~ 279 (590)
.++|+.|+..+....+..++. +|++++ .+. .|.||||+|+..|+.+++++|++.| + .|..|+||||+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~-----~g~~~~-~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMA-----NGAPFT-TDW---LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-----HTCCCC-CCT---TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHH-----cCCCCC-cCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 466777777773444433333 577765 344 8999999999999999999999999 4 36789999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHH
Q 007758 280 AAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEA 359 (590)
Q Consensus 280 Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l 359 (590)
|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++++
T Consensus 74 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 74 AASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999998 99999999999999999999999999999999999999999999999999999999998765
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=2.3e-26 Score=215.00 Aligned_cols=160 Identities=13% Similarity=-0.004 Sum_probs=139.7
Q ss_pred chHHHHHHHcCcH----HHHhcccc-cccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 175 IPILVAALHCQLN----RLHSCCIQ-RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~g~d-i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
.+|||.|+..|+. .|++.+.+ ++.++..|.||||+|+..+ ..+++++|++ +|++++..+. .|.||||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 74 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFG-EIETVRFLLE----WGADPHILAK---ERESALS 74 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTT-CHHHHHHHHH----HTCCTTCCCT---TCCCHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCchhhcc---cCCCHHH
Confidence 6899999999984 77788776 8889999999999999998 5566666653 6999999988 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLET 325 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 325 (590)
+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 75 LASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence 999999999999999999 44 678999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCCCCCCcCCCCCCcH
Q 007758 326 LLSKGACASETTSDGRTA 343 (590)
Q Consensus 326 LL~~Gadvn~~d~~G~Tp 343 (590)
|+++|+++...+..|.||
T Consensus 154 L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 154 IENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHSCC-------
T ss_pred HHHHHHHHhcccCCCCCC
Confidence 999999999999999887
No 64
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.1e-25 Score=207.98 Aligned_cols=149 Identities=19% Similarity=0.136 Sum_probs=135.0
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
..||||.|+..|+. .|+++|++++.++..|.||||+|+. + ..+++++|++ +|++++..+. .|.||||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-G-NPEIARRLLL----RGANPDLKDR---TGFAVIH 75 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-S-CHHHHHHHHH----TTCCTTCCCT---TSCCHHH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-C-cHHHHHHHHH----cCCCCCCCCC---CCCCHHH
Confidence 47999999999984 8889999999999999999999999 7 5566666653 6999999888 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLAD-LNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~ad-vn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++ ++.+|..|+||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-ASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-CCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 999999999999999999 43 678999999999999999999999999 66 7999999999999999999999999
Q ss_pred HHHhCCCC
Q 007758 325 TLLSKGAC 332 (590)
Q Consensus 325 ~LL~~Gad 332 (590)
+|+++|||
T Consensus 155 ~Ll~~GAd 162 (162)
T 1ihb_A 155 LMQANGAG 162 (162)
T ss_dssp HHHHTC--
T ss_pred HHHHhCCC
Confidence 99999986
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1e-26 Score=232.12 Aligned_cols=191 Identities=12% Similarity=0.088 Sum_probs=158.3
Q ss_pred hhhHHHHHHHhcCCceeeeeccc----ccccccccCCC--CCCchHHHHHH---HcCc----HHHHhcccc---------
Q 007758 138 YAVELIYACAAFQITELVSYFQC----LLLILAENAPV--EDVIPILVAAL---HCQL----NRLHSCCIQ--------- 195 (590)
Q Consensus 138 ~~lelL~~A~~~~~~elv~~Ll~----~g~din~~~~~--~~~~t~Lh~A~---~~g~----~~Ll~~g~d--------- 195 (590)
|..++|+.|+..|..+.++.+++ .+.+++.++.. ..+.||||+|+ ..|+ +.|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 34578999999998986665555 88888876632 44599999999 4565 488888865
Q ss_pred --cccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCc-----------ccccCCcHHHHHHhcCCHHHHHH
Q 007758 196 --RIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDP-----------MHEKRVRRIHKALDSDDFELLNL 262 (590)
Q Consensus 196 --i~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~-----------~~~~g~t~Lh~A~~~g~~~~v~~ 262 (590)
++..|..|.||||+|+..+ ..+++++|++ +|++++..+. .+..|.||||+|+..|+.++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g-~~~~v~~Ll~----~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERR-CKHYVELLVE----KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred ccccccccCCCCHHHHHHHcC-CHHHHHHHHh----CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 3344558999999999999 5566666664 6999999882 00279999999999999999999
Q ss_pred HHh---CC-CC---CCCCccHHHHHHHcCC---------HHHHHHHHHcCCCCc-------cccCCCCCcHHHHHHHcCC
Q 007758 263 LLN---EY-EV---TLDDAFALHYAAAYCN---------PKVFKEVLNMGLADL-------NLKDARGRTVLHVAARRKE 319 (590)
Q Consensus 263 LL~---~g-~i---d~~G~TpLh~Aa~~g~---------~~iv~~LL~~g~adv-------n~~d~~G~TpLh~Aa~~g~ 319 (590)
|++ .| ++ |..|+||||+|+..|+ .+++++|++.| +++ +.+|..|+||||+|+..|+
T Consensus 159 Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 159 LTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-AKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-HHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-cccccccchhhcccCCCCCHHHHHHHcCC
Confidence 999 78 44 6789999999999888 79999999998 999 7899999999999999999
Q ss_pred HHHHHHHHhCCCCCC
Q 007758 320 PAVLETLLSKGACAS 334 (590)
Q Consensus 320 ~~iv~~LL~~Gadvn 334 (590)
.++|++||++|++..
T Consensus 238 ~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 238 IGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcc
Confidence 999999999987654
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=9.8e-26 Score=207.03 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=133.1
Q ss_pred CccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHH
Q 007758 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALH 278 (590)
Q Consensus 203 g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh 278 (590)
+.||||.|+..+....+..++. . .+.+++..+. .|.||||+ +..|+.+++++|++.| ++ |..|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~-~---~~~~~~~~~~---~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 73 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLH-R---ELVHPDALNR---FGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-T---TCCCTTCCCT---TSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHH-h---hCcCccccCC---CCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 3577777877774444444444 2 3557888887 99999999 9999999999999999 43 678999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHH
Q 007758 279 YAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIE 358 (590)
Q Consensus 279 ~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~ 358 (590)
+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.++++.
T Consensus 74 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999998 99999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhc
Q 007758 359 ASKQ 362 (590)
Q Consensus 359 l~~~ 362 (590)
++++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8764
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=5.9e-26 Score=204.39 Aligned_cols=130 Identities=18% Similarity=0.086 Sum_probs=123.7
Q ss_pred CCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007758 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR 306 (590)
Q Consensus 231 Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~ 306 (590)
+++++..+. .|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+. |+.+++++|++.| +++|.+|..
T Consensus 2 ~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLGG---SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPA 76 (136)
T ss_dssp CCCCSCCCC---CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTT
T ss_pred CCCccCCCC---CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCC
Confidence 567888887 9999999999999999999999999 43 6789999999999 9999999999998 999999999
Q ss_pred -CCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 007758 307 -GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQE 365 (590)
Q Consensus 307 -G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~ 365 (590)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.++++++++.|++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999998864
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.93 E-value=1.3e-25 Score=213.90 Aligned_cols=155 Identities=16% Similarity=0.129 Sum_probs=140.3
Q ss_pred ccccCCCCCCchHHHHHHHcCc----HHHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcc
Q 007758 165 LAENAPVEDVIPILVAALHCQL----NRLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPM 240 (590)
Q Consensus 165 in~~~~~~~~~t~Lh~A~~~g~----~~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~ 240 (590)
+|.++..+ .||||+|+..|+ ..|+++|++++.++..|.||||+|+..+ ...++++|++ +|++++..|.
T Consensus 28 ~n~~d~~g--~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~- 99 (192)
T 2rfm_A 28 RNYRDSYN--RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNN-RLGIAEKLLS----KGSNVNTKDF- 99 (192)
T ss_dssp HTCCCTTC--CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----HTCCTTCCCT-
T ss_pred HhCcCCCC--CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcC-CHHHHHHHHH----CCCCCCCCCC-
Confidence 45555555 999999999998 3899999999999999999999999998 5556666654 6999999888
Q ss_pred cccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Q 007758 241 HEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (590)
Q Consensus 241 ~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~ 316 (590)
.|.||||+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.
T Consensus 100 --~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 100 --SGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASARI 176 (192)
T ss_dssp --TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHH
T ss_pred --CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999 43 678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCC
Q 007758 317 RKEPAVLETLLSKG 330 (590)
Q Consensus 317 ~g~~~iv~~LL~~G 330 (590)
.|+.+++++|+++|
T Consensus 177 ~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 177 FGRQEVIKIFTEVR 190 (192)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred hCcHHHHHHHHhcc
Confidence 99999999999865
No 69
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.92 E-value=2e-25 Score=207.47 Aligned_cols=153 Identities=12% Similarity=-0.001 Sum_probs=139.4
Q ss_pred CCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 173 DVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 173 ~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
.+.||||.|+..|+. .|++.|.+++.++..|.||||+|+..+ ..+++++|++ +|++++..+. .|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHG-QIAVVEFLLQ----NGADPQLLGK---GRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCC-CHHHHHHHHH----cCCCCCCcCC---CCCcHH
Confidence 468999999999984 888999999999999999999999998 5556666653 6999999888 999999
Q ss_pred HHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 249 HKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
|+|+..|+.+++++|++.| + .|..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.++++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG-ADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999999998 4 3678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCC
Q 007758 325 TLLSKGACAS 334 (590)
Q Consensus 325 ~LL~~Gadvn 334 (590)
+|+++++++.
T Consensus 153 ~L~~~~~~~~ 162 (167)
T 3v31_A 153 VIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999876643
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=227.97 Aligned_cols=177 Identities=14% Similarity=0.042 Sum_probs=151.2
Q ss_pred HHHHhcCCceeeeeccccccc--ccccCCCCCCchHHHHHHHcCcH----HHHhccc-ccccccCCCcccccccc-----
Q 007758 144 YACAAFQITELVSYFQCLLLI--LAENAPVEDVIPILVAALHCQLN----RLHSCCI-QRIARSNLDNVCLEKEL----- 211 (590)
Q Consensus 144 ~~A~~~~~~elv~~Ll~~g~d--in~~~~~~~~~t~Lh~A~~~g~~----~Ll~~g~-di~~~d~~g~t~L~~A~----- 211 (590)
+.|...+..+.++.++..+.+ +|.+|..| .||||+|+..|+. .|++.|+ +++..+..|.||||+|+
T Consensus 81 ~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g--~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~ 158 (276)
T 4hbd_A 81 HPELVRRHLVTFRAMSARLLDYVVNIADSNG--NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLK 158 (276)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHTCCCTTS--CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCCCCC--CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhh
Confidence 445555666677777777766 67666655 9999999999984 8899998 99999999999999998
Q ss_pred CccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHH
Q 007758 212 PDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPK 287 (590)
Q Consensus 212 ~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~ 287 (590)
..+ ...++++|++ .|++++..+. .|+||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+
T Consensus 159 ~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~ 230 (276)
T 4hbd_A 159 TQD-DIETVLQLFR----LGNINAKASQ---AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKE 230 (276)
T ss_dssp SHH-HHHHHHHHHH----HSCTTCCCTT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred hhh-hHHHHHHHHH----cCCCccccCC---CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 445 4445555553 5888887777 9999999999999999999999999 44 688999999999999999
Q ss_pred HHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 007758 288 VFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (590)
Q Consensus 288 iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G 330 (590)
+|++||+..|+++|.+|..|+||||+|+..|+.+++++|++++
T Consensus 231 iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 231 IAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999444999999999999999999999999999999874
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.1e-25 Score=222.78 Aligned_cols=157 Identities=20% Similarity=0.188 Sum_probs=116.4
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccH
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFA 276 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~Tp 276 (590)
..|.||||.|+..+ ...+++.|++ +|++++.. . .|.||||+|+..|+.++|++|++.| ++ |..|+||
T Consensus 3 ~~g~t~L~~a~~~~-~~~~~~~ll~----~g~~~~~~-~---~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~ 73 (239)
T 1ycs_B 3 ITGQVSLPPGKRTN-LRKTGSERIA----HGMRVKFN-P---LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITA 73 (239)
T ss_dssp -------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCH
T ss_pred ccccccCchhhhhh-hHHHHHHHhc----cCCCcccC-c---hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 45899999999988 4444444442 79999854 4 8999999999999999999999999 44 6789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCC-cHHHHH--HHcCCh
Q 007758 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGR-TAVAIC--RRMTRR 353 (590)
Q Consensus 277 Lh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~-TpL~~A--~~~~~~ 353 (590)
||+|+..|+.+++++||+.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +..|+.
T Consensus 74 L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence 99999999999999999998 99999999999999999999999999999999999999998887 999999 788999
Q ss_pred hhHHHHHhcCCCcc
Q 007758 354 KDYIEASKQGQETN 367 (590)
Q Consensus 354 ~~v~~l~~~G~~~~ 367 (590)
++++++++.|+.+.
T Consensus 153 ~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 153 QCSQFLYGVQEKMG 166 (239)
T ss_dssp CHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhccc
Confidence 99999999887654
No 72
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=1.2e-24 Score=203.11 Aligned_cols=148 Identities=20% Similarity=0.228 Sum_probs=133.8
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
..++|+.|+..|+. .|+++|++++.++..|.||||+|+..+ ..+++++|++ +|++++..|. .|.||||
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 85 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG-HLEIVEVLLK----NGADVNAVDH---AGMTPLR 85 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCccCC---CCCCHHH
Confidence 37899999999984 888999999999999999999999988 5555555553 6999999888 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLET 325 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 325 (590)
+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 164 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDNGNEDLAEI 164 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence 999999999999999999 43 678999999999999999999999998 9999999999999999999999999999
Q ss_pred HHhCC
Q 007758 326 LLSKG 330 (590)
Q Consensus 326 LL~~G 330 (590)
|+++|
T Consensus 165 L~~~G 169 (169)
T 2y1l_E 165 LQKLN 169 (169)
T ss_dssp HHTC-
T ss_pred HHHcC
Confidence 99986
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.92 E-value=4.6e-28 Score=238.81 Aligned_cols=191 Identities=10% Similarity=-0.020 Sum_probs=159.1
Q ss_pred eecccccccccccCCC-CCCchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhcccc
Q 007758 156 SYFQCLLLILAENAPV-EDVIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQES 230 (590)
Q Consensus 156 ~~Ll~~g~din~~~~~-~~~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~ 230 (590)
+.|+++|++++..+.. .++.||||+|+..|+. .|+++|++++.+|..|.||||+|+..+ ..+++++|++ +
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~----~ 76 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGA-NYSIVDFLIT----A 76 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----T
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHH----C
Confidence 5677888888765543 3558999999999984 888999999999999999999999998 5666666664 6
Q ss_pred CCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---C-CCCccHHHHH--HHcCCHHHHHHHHHcCCCCcccc
Q 007758 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAFALHYA--AAYCNPKVFKEVLNMGLADLNLK 303 (590)
Q Consensus 231 Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d-~~G~TpLh~A--a~~g~~~iv~~LL~~g~advn~~ 303 (590)
|+++|..|. .|+||||+|+..|+.++|++|++.| ++ + ..|+||||+| +..|+.+++++|++.| ++++.+
T Consensus 77 ga~~n~~d~---~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~g-a~~~~~ 152 (229)
T 2vge_A 77 GANVNSPDS---HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVE-QSMGLM 152 (229)
T ss_dssp TCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHH-HHTTTS
T ss_pred CCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcC-CCcccc
Confidence 999999988 9999999999999999999999999 44 3 5899999999 9999999999999998 999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCcCCCCCCcHHHHHHHcCChhhHHH
Q 007758 304 DARGRTVLHVAARRKEPAVLETLLSKGAC--ASETTSDGRTAVAICRRMTRRKDYIE 358 (590)
Q Consensus 304 d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad--vn~~d~~G~TpL~~A~~~~~~~~v~~ 358 (590)
|..|.||||.++..+. +++|++.|++ ++.+|..|+||||+|+..|+.++++.
T Consensus 153 ~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 153 NSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp GGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred cCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 9999999997665543 3688899998 77889999999999999998877754
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=9e-25 Score=205.82 Aligned_cols=158 Identities=12% Similarity=0.078 Sum_probs=141.5
Q ss_pred CchHHHHHHHcCcH----HHHhc-ccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 174 VIPILVAALHCQLN----RLHSC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~-g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
+.++|+.|+..|+. .|++. +.+++.++..|.||||+|+..+ ...++++|++ +|++++..|. .|.|||
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L 76 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREG-RSAVVEMLIM----RGARINVMNR---GDDTPL 76 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TCCCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcC-cHHHHHHHHH----cCCCCCCcCC---CCCCHH
Confidence 47899999999984 66666 7789999999999999999998 5556666653 6999999988 999999
Q ss_pred HHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 249 HKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
|+|+..|+.+++++|+++| ++ |..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++.++++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANG-ALVSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcchhccCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999 43 678999999999999999999999998 999999999999999999999999999
Q ss_pred HHHhCCCCCCcCCCCC
Q 007758 325 TLLSKGACASETTSDG 340 (590)
Q Consensus 325 ~LL~~Gadvn~~d~~G 340 (590)
+|+++|++++..+..+
T Consensus 156 ~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 156 RAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HHHHTTCCCSCBCCCC
T ss_pred HHHHhhcCcccCCccc
Confidence 9999999999877655
No 75
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3.9e-24 Score=192.42 Aligned_cols=121 Identities=24% Similarity=0.191 Sum_probs=115.4
Q ss_pred ccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Q 007758 242 EKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARR 317 (590)
Q Consensus 242 ~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~ 317 (590)
..|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHc
Confidence 37899999999999999999999999 44 678999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 007758 318 KEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQG 363 (590)
Q Consensus 318 g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G 363 (590)
|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.+++.|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999876
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=7.7e-26 Score=223.82 Aligned_cols=169 Identities=12% Similarity=0.021 Sum_probs=124.0
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
|.||||.|+..+.. .|+++|++++.. ..|.||||.|+..+ ...++++|++ +|+++|..|. .|.||||
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g-~~~~v~~Ll~----~g~~~~~~d~---~g~t~L~ 75 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEG-EFDLVQRIIY----EVDDPSLPND---EGITALH 75 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHT-CHHHHHHHTS----TTSSCCCCCT---TSCCHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcC-CHHHHHHHHH----cCCCCCCcCC---CCCCHHH
Confidence 48999999998863 888999998864 77899999999988 4455555543 6999999988 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC-cHHHHH--HHcCCHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGR-TVLHVA--ARRKEPAV 322 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~-TpLh~A--a~~g~~~i 322 (590)
+|+..|+.++|++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|. ||||+| +..|+.++
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-AAVFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcceecCCCCcchHHHHHHhhhccHHH
Confidence 999999999999999999 44 678999999999999999999999998 99999998887 999999 88899999
Q ss_pred HHHHHhCCCCCCcC---------CCCCCcHHHHHHHcCC
Q 007758 323 LETLLSKGACASET---------TSDGRTAVAICRRMTR 352 (590)
Q Consensus 323 v~~LL~~Gadvn~~---------d~~G~TpL~~A~~~~~ 352 (590)
+++|+++|++++.. +..|.+|++++...|.
T Consensus 155 ~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 155 SQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999999998876 5567788777766553
No 77
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.3e-23 Score=184.76 Aligned_cols=122 Identities=30% Similarity=0.367 Sum_probs=117.1
Q ss_pred cCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Q 007758 243 KRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (590)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g 318 (590)
+|.||||+|+..|+.+++++|+++| + .+..|.||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999998 4 4678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCC
Q 007758 319 EPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQE 365 (590)
Q Consensus 319 ~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~ 365 (590)
+.+++++|+++|++++.+|..|+||||+|+..++.++++++++.|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999874
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=6.7e-24 Score=194.57 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=128.5
Q ss_pred CchHHHHHHHcCcH----HHHhcccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 174 VIPILVAALHCQLN----RLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
..++|+.|+..|+. .|+++|++++ .+..|.||||+|+..+ ..+++++|++ +|++++..+. .|+||||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 72 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYG-HFSTTEVLLR----AGVSRDARTK---VDRTPLH 72 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHT-CHHHHHHHHT----TTCCTTCCCT---TCCCHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCCCCC---CCCCHHH
Confidence 36899999999984 7888898876 5788999999999988 5556666553 6999999888 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLET 325 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 325 (590)
+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++
T Consensus 73 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 73 MAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999 44 678999999999999999999999998 9999999999999999999999999998
Q ss_pred H
Q 007758 326 L 326 (590)
Q Consensus 326 L 326 (590)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 7
No 79
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=8.1e-25 Score=196.85 Aligned_cols=129 Identities=19% Similarity=0.135 Sum_probs=113.2
Q ss_pred CCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007758 231 EANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDAR 306 (590)
Q Consensus 231 Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~ 306 (590)
|+|+ ..|. .|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..
T Consensus 1 G~d~-~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FTNH---RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQ 75 (137)
T ss_dssp ---C-CCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGG
T ss_pred CCCC-CcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCC
Confidence 5677 5555 9999999999999999999999999 43 678999999999999999999999998 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 307 GRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 307 G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+.+..+.+.+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999998877777766655544
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=1.3e-24 Score=214.08 Aligned_cols=182 Identities=19% Similarity=0.158 Sum_probs=146.9
Q ss_pred cCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 007758 230 SEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDA 305 (590)
Q Consensus 230 ~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~ 305 (590)
+|++++..+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|++.| +++|.+|.
T Consensus 7 ~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~ 85 (229)
T 2vge_A 7 KAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSPDS 85 (229)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCT
T ss_pred cCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCC
Confidence 78899888877778999999999999999999999998 44 678999999999999999999999998 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCC-CCCCcHHHHH--HHcCChhhHHHHHhcCCCcchhhchHHHHHHHHHh
Q 007758 306 RGRTVLHVAARRKEPAVLETLLSKGACASETT-SDGRTAVAIC--RRMTRRKDYIEASKQGQETNKDWLCIAFLEREIRR 382 (590)
Q Consensus 306 ~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d-~~G~TpL~~A--~~~~~~~~v~~l~~~G~~~~~~~~~~~~l~~~~~~ 382 (590)
.|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+| +..|+.++++++++.|+++...
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~------------- 152 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM------------- 152 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS-------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc-------------
Confidence 99999999999999999999999999999986 6999999999 9999999999999988765421
Q ss_pred cccCcCcccccccCCchhhhHHHHHhccccc-eeecccchhhHHHhhcCCCcccccccc
Q 007758 383 NSMSGNLAMSADVMGDAFQMKLDYLEKKVAG-VWLFPSEAREAMEIAGADTATGLSALG 440 (590)
Q Consensus 383 ~p~~~d~~~~~~~~~~~l~~~~~~le~~v~~-~~l~~~ea~~~~~ia~~d~t~~l~~~~ 440 (590)
+.....+... -..... ++++..++++.+...+.+|.|||..+.
T Consensus 153 -----~~~~~~~l~~----------~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~ 196 (229)
T 2vge_A 153 -----NSGAVYALWD----------YSAEFGDELSFREGESVTVLRRDGPEETDWWWAA 196 (229)
T ss_dssp -----GGGEEEESSC----------BCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEE
T ss_pred -----cCCchHHHHH----------HhhccccccCccccccccccccCCCcccHHHHHH
Confidence 0001001000 000012 455666666555666777889998874
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=1.9e-24 Score=199.25 Aligned_cols=137 Identities=18% Similarity=0.096 Sum_probs=74.6
Q ss_pred ccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCc
Q 007758 199 RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDA 274 (590)
Q Consensus 199 ~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~ 274 (590)
.+..|.||||+|+..+ ..+++++|++ +|++++..+. .|+||||+|+ .|+.+++++|+++| ++ |..|+
T Consensus 8 ~~~~~~t~L~~A~~~g-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ 78 (156)
T 1bi7_B 8 SMEPSADWLATAAARG-RVEEVRALLE----AGANPNAPNS---YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATL 78 (156)
T ss_dssp --CCSTTHHHHHHHHT-CHHHHHHHHT----TTCCTTCCCS---SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTC
T ss_pred CCccchHHHHHHHHcC-CHHHHHHHHH----cCCCCCCCCC---CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 3444556666666555 3333333332 4666666655 6666666663 66666666666666 32 45566
Q ss_pred c-HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHH
Q 007758 275 F-ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVA 345 (590)
Q Consensus 275 T-pLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~ 345 (590)
| |||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||.+
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 6 666666666666666666665 666666666666666666666666666666666666666666666655
No 82
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=2.2e-23 Score=191.25 Aligned_cols=144 Identities=22% Similarity=0.189 Sum_probs=128.9
Q ss_pred chHHHHHHHcCcH----HHHhc-ccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHH
Q 007758 175 IPILVAALHCQLN----RLHSC-CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIH 249 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~-g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh 249 (590)
.|+||.|+..|+. .|++. +.+++..+..|.||||+ +..+ ..+++++|++ +|++++..|. .|.||||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~ 73 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFG-STAIALELLK----QGASPNVQDT---SGTSPVH 73 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcC-CHHHHHHHHH----CCCCCCCcCC---CCCCHHH
Confidence 6899999999984 66666 45899999999999999 7777 4555555553 6999999888 9999999
Q ss_pred HHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHH
Q 007758 250 KALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLET 325 (590)
Q Consensus 250 ~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~ 325 (590)
+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++. ++++.+|..|+||||+|+..|+.+++++
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 74 DAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999999 43 67899999999999999999999987 7999999999999999999999999999
Q ss_pred HHhC
Q 007758 326 LLSK 329 (590)
Q Consensus 326 LL~~ 329 (590)
|+++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9975
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.5e-24 Score=206.74 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=128.5
Q ss_pred CccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCH----HHHHHHHhCC-CC---CCCCc
Q 007758 203 DNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDF----ELLNLLLNEY-EV---TLDDA 274 (590)
Q Consensus 203 g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~----~~v~~LL~~g-~i---d~~G~ 274 (590)
+.++|+.|+..+....+..++. . +++..+ +..|+||||+|+..|+. +++++||++| ++ |..|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~-----~--~~~~~~--~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~ 76 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFE-----K--GYEDKE--SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGT 76 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHH-----H--SSSCHH--HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cccHHHHHHHcCCHHHHHHHHh-----c--Cccccc--ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCC
Confidence 4578888888776666665554 2 344444 14899999999999985 5999999999 54 67899
Q ss_pred cHHHHHHHcCC------HHHHHHHHHcCCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-CCCCCCcCCCCCC
Q 007758 275 FALHYAAAYCN------PKVFKEVLNMGLADLNLKDARGR-TVLHVAARRK-----EPAVLETLLS-KGACASETTSDGR 341 (590)
Q Consensus 275 TpLh~Aa~~g~------~~iv~~LL~~g~advn~~d~~G~-TpLh~Aa~~g-----~~~iv~~LL~-~Gadvn~~d~~G~ 341 (590)
||||+|+..|+ .+++++||+.| +|||.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|+
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~ 155 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGL 155 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSC
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCC
Confidence 99999999987 57899999998 99999999999 9999999954 4569999999 9999999999999
Q ss_pred cHHHHHHHcCChhhHHHHHhcC
Q 007758 342 TAVAICRRMTRRKDYIEASKQG 363 (590)
Q Consensus 342 TpL~~A~~~~~~~~v~~l~~~G 363 (590)
||||+|++.|+.+.++++.+..
T Consensus 156 TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 156 TALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999999999999887653
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=3.7e-24 Score=192.58 Aligned_cols=130 Identities=16% Similarity=0.072 Sum_probs=117.0
Q ss_pred ccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC--
Q 007758 193 CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-- 269 (590)
Q Consensus 193 g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i-- 269 (590)
+++++.++..|.||||+|+..+ ..+++++|++ +|++++..|. .|+||||+|+. |+.+++++|+++| ++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~ 72 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARG-QVETVRQLLE----AGADPNALNR---FGRRPIQVMMM-GSAQVAELLLLHGAEPNC 72 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TCCTTTTTSTT-SCHHHHHHHHHHTCCSSC
T ss_pred CCCccCCCCCCccHHHHHHHcC-CHHHHHHHHH----cCCCcCCcCC---CCCCHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 4678888999999999999988 4555555543 6999999887 99999999999 9999999999999 44
Q ss_pred -CCC-CccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 007758 270 -TLD-DAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (590)
Q Consensus 270 -d~~-G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad 332 (590)
|.. |+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 567 999999999999999999999998 99999999999999999999999999999999986
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=5e-24 Score=196.36 Aligned_cols=125 Identities=20% Similarity=0.116 Sum_probs=115.4
Q ss_pred cccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCc-HHHHHH
Q 007758 241 HEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRT-VLHVAA 315 (590)
Q Consensus 241 ~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~T-pLh~Aa 315 (590)
+..|.||||+|+..|+.++|++|+++| ++ |..|+||||+|+ .|+.+++++|++.| +++|.+|..|+| |||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHDAA 86 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHH
Confidence 348999999999999999999999999 43 678999999985 99999999999998 999999999999 999999
Q ss_pred HcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 316 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++++++.|+++.
T Consensus 87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~ 138 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR 138 (156)
T ss_dssp HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----
T ss_pred HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999999999875
No 86
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=8.2e-24 Score=196.19 Aligned_cols=148 Identities=20% Similarity=0.171 Sum_probs=129.3
Q ss_pred CchHHHHHHHcCcH----HHHh-cccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHH
Q 007758 174 VIPILVAALHCQLN----RLHS-CCIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRI 248 (590)
Q Consensus 174 ~~t~Lh~A~~~g~~----~Ll~-~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~L 248 (590)
+.++||.|+..|+. .|++ .+.+++..+..|.||||+|+..+ ..+++++|++ +|++++..|. .|+|||
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L 79 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYN-RVSVVEYLLQ----HGADVHAKDK---GGLVPL 79 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTT-CHHHHHHHHH----TTCCTTCCCT---TSCCHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcC-hHHHHHHHHh----cCCCCCccCC---CCCCHH
Confidence 48999999999985 4554 55677788888999999999988 4555565553 6999999988 999999
Q ss_pred HHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 007758 249 HKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLE 324 (590)
Q Consensus 249 h~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~ 324 (590)
|+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+. |+.++++
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~i~~ 157 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTDIQD 157 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHHHHH
T ss_pred HHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChHHHH
Confidence 9999999999999999999 44 678999999999999999999999998 9999999999999999877 9999999
Q ss_pred HHHhCCC
Q 007758 325 TLLSKGA 331 (590)
Q Consensus 325 ~LL~~Ga 331 (590)
+|+++||
T Consensus 158 ~L~~~gA 164 (165)
T 3twr_A 158 LLRGDAA 164 (165)
T ss_dssp HHHTC--
T ss_pred HHhhccc
Confidence 9999986
No 87
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=5.2e-23 Score=181.54 Aligned_cols=107 Identities=26% Similarity=0.251 Sum_probs=100.6
Q ss_pred ccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Q 007758 242 EKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARR 317 (590)
Q Consensus 242 ~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~ 317 (590)
..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHc
Confidence 37899999999999999999999999 43 678999999999999999999999998 99999999999999999999
Q ss_pred CCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHH
Q 007758 318 KEPAVLETLLSKGACASETTSDGRTAVAICRR 349 (590)
Q Consensus 318 g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~ 349 (590)
|+.+++++|+++|++++.+|.+|+||||+|..
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 99999999999999999999999999999943
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=1.2e-22 Score=198.11 Aligned_cols=127 Identities=18% Similarity=0.192 Sum_probs=111.4
Q ss_pred cccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Q 007758 241 HEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (590)
Q Consensus 241 ~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~ 316 (590)
+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+||..|+.++|++|++.+++++|.+|..|+||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 348999999999999999999999999 43 67899999999999999999999999449999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 007758 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETN 367 (590)
Q Consensus 317 ~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~ 367 (590)
.|+.++|++||++|++++.+|..|+||||+|+..++.++++.+.+.|+...
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999999999999999999999999999887653
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=9.1e-22 Score=172.79 Aligned_cols=122 Identities=30% Similarity=0.375 Sum_probs=108.7
Q ss_pred CCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHH
Q 007758 202 LDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFAL 277 (590)
Q Consensus 202 ~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpL 277 (590)
.|.||||.|+..+ ..+++++|++ +|++++..+. .|.||||+|+..|+.+++++|++.| + .|..|.|||
T Consensus 1 ~g~t~L~~A~~~~-~~~~v~~Ll~----~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 72 (126)
T 1n0r_A 1 NGRTPLHLAARNG-HLEVVKLLLE----AGADVNAKDK---NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (126)
T ss_dssp CCCCHHHHHHHHT-CHHHHHHHHH----HTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccHHHHHHHcC-cHHHHHHHHH----cCCCCCCcCC---CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHH
Confidence 3678888888777 4445555543 5889988887 9999999999999999999999999 4 367899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 007758 278 HYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (590)
Q Consensus 278 h~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad 332 (590)
|+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999998 99999999999999999999999999999999986
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=7.6e-23 Score=195.00 Aligned_cols=153 Identities=16% Similarity=0.146 Sum_probs=127.6
Q ss_pred chHHHHHHHcCcH----HHHhccccccccc-CCCccccccccCccchh---HHHHHHhhhccccCCCcCCCCcccccCCc
Q 007758 175 IPILVAALHCQLN----RLHSCCIQRIARS-NLDNVCLEKELPDEVSS---EIKSLRVKSNQESEANIKEVDPMHEKRVR 246 (590)
Q Consensus 175 ~t~Lh~A~~~g~~----~Ll~~g~di~~~d-~~g~t~L~~A~~~~~~~---~i~~lL~~~~~~~Gadin~~d~~~~~g~t 246 (590)
.++|+.|+..|.. .++..+ ++.++ ..|.||||+|+..+... .++++|++ +|+++|..|. .|+|
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~----~Gadvn~~d~---~g~T 77 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLIN----KGADIKSRTK---EGTT 77 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH----TTCCSSCCCT---TCCC
T ss_pred ccHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHH----CCCCCCCCCC---CCCc
Confidence 5789999999985 444444 45555 67999999999987432 46777664 6999999998 9999
Q ss_pred HHHHHHhcCC------HHHHHHHHhCC-CC---CCCCc-cHHHHHHHcC-----CHHHHHHHHH-cCCCCccccCCCCCc
Q 007758 247 RIHKALDSDD------FELLNLLLNEY-EV---TLDDA-FALHYAAAYC-----NPKVFKEVLN-MGLADLNLKDARGRT 309 (590)
Q Consensus 247 ~Lh~A~~~g~------~~~v~~LL~~g-~i---d~~G~-TpLh~Aa~~g-----~~~iv~~LL~-~g~advn~~d~~G~T 309 (590)
|||+|+..|+ .+++++|+++| ++ |..|+ ||||+|+..+ +.+++++||+ .| +|+|.+|..|+|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-ad~~~~d~~G~T 156 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-LQLLIKDKWGLT 156 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-CCTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-CCCcccCCCCCC
Confidence 9999999987 68999999999 55 56788 9999999955 4569999999 66 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcCC
Q 007758 310 VLHVAARRKEPAVLETLLSKGACASETT 337 (590)
Q Consensus 310 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d 337 (590)
|||+|+..|+.++|++|+++..+.+.++
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999998766665554
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.1e-21 Score=176.33 Aligned_cols=121 Identities=18% Similarity=0.192 Sum_probs=106.4
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccH
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFA 276 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~Tp 276 (590)
..+.||||+|+..+ ..+++++|++ +|++++..|. .|+||||+|+..|+.+++++|+++| ++ |..|.||
T Consensus 12 ~~~~t~l~~A~~~g-~~~~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~ 83 (136)
T 2jab_A 12 SDLGKKLLEAARAG-QDDEVRILMA----NGADVNAKDE---YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTP 83 (136)
T ss_dssp CHHHHHHHHHHHHT-CHHHHHHHHH----TTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred ccccHHHHHHHHhC-CHHHHHHHHH----cCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCH
Confidence 34677888888777 4444444442 6999999887 9999999999999999999999999 43 6789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 007758 277 LHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG 330 (590)
Q Consensus 277 Lh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G 330 (590)
||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999998 999999999999999999999999999999987
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=8.1e-22 Score=186.59 Aligned_cols=111 Identities=28% Similarity=0.336 Sum_probs=104.2
Q ss_pred cccCCcHHHHHHhcCCHHHHHHHHhCC-C---CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHH
Q 007758 241 HEKRVRRIHKALDSDDFELLNLLLNEY-E---VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHVAA 315 (590)
Q Consensus 241 ~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~---id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d-~~G~TpLh~Aa 315 (590)
+..|.||||+|+..|+.+++++|++ | + .|..|+||||+|+..|+.+++++|++.| +++|.+| ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 3489999999999999999999999 6 4 3678999999999999999999999998 9999998 89999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCCh
Q 007758 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRR 353 (590)
Q Consensus 316 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~ 353 (590)
..|+.+++++|+++|++++.+|..|+||||+|++.++.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 99999999999999999999999999999999987544
No 93
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=9.5e-24 Score=223.05 Aligned_cols=206 Identities=10% Similarity=-0.012 Sum_probs=118.1
Q ss_pred HHHHHHHhcCCceeeeeccccccccccc-CCCCCCchHHHHHHHcCcH----HHHhcccc---cccccCCCccccccccC
Q 007758 141 ELIYACAAFQITELVSYFQCLLLILAEN-APVEDVIPILVAALHCQLN----RLHSCCIQ---RIARSNLDNVCLEKELP 212 (590)
Q Consensus 141 elL~~A~~~~~~elv~~Ll~~g~din~~-~~~~~~~t~Lh~A~~~g~~----~Ll~~g~d---i~~~d~~g~t~L~~A~~ 212 (590)
++|++|+..|..+++++|+++|+..... +....+.||||+|+..|+. .|+++|++ .+..+.. .||||+|+.
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~ 172 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE 172 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence 6677777777777777777776521100 0111225677777777763 66666664 2222222 677777777
Q ss_pred ccchhHHHHHHhhhccccCCCcCC--CCcccccCCcHHHHHH-hcCCHHHHHHHHhCCCCCCCCccHHHHHHHcCCHHHH
Q 007758 213 DEVSSEIKSLRVKSNQESEANIKE--VDPMHEKRVRRIHKAL-DSDDFELLNLLLNEYEVTLDDAFALHYAAAYCNPKVF 289 (590)
Q Consensus 213 ~~~~~~i~~lL~~~~~~~Gadin~--~d~~~~~g~t~Lh~A~-~~g~~~~v~~LL~~g~id~~G~TpLh~Aa~~g~~~iv 289 (590)
.| ..+++++|++ +|++++. .|. .|.||||+|+ ..|+.++|++|++.|. .|.||||+|+.+|+.+++
T Consensus 173 ~G-~~eiv~~Ll~----~ga~~~~~~~d~---~g~TpL~~Aa~~~G~~eiv~~Ll~~ga---~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 173 NG-HLHVLNRLCE----LAPTEATAMIQA---ENYYAFRWAAVGRGHHNVINFLLDCPV---MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp TT-CHHHHHHHHH----SCGGGHHHHHHH---HHHHHHHHHHSTTCCHHHHHHHTTSHH---HHHHHHHCTTTTTTTTHH
T ss_pred CC-CHHHHHHHHH----cCCccchhccCC---CCCCHHHHHHHHCCCHHHHHHHHhCCC---ccchHHHHHHHCCCHHHH
Confidence 66 4444444442 4666655 554 6677777777 7777777777776652 266777777777777777
Q ss_pred HHHHHcCCCCccccCCCCCcHHHHHHHcCC---------------------------HHHHHHHHhCCC-----CCCcCC
Q 007758 290 KEVLNMGLADLNLKDARGRTVLHVAARRKE---------------------------PAVLETLLSKGA-----CASETT 337 (590)
Q Consensus 290 ~~LL~~g~advn~~d~~G~TpLh~Aa~~g~---------------------------~~iv~~LL~~Ga-----dvn~~d 337 (590)
++|++.| ++++.+|. ++++|+..|+ .+.+++|++.++ +.....
T Consensus 242 ~lL~~~g-a~~~~~~~----~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~ 316 (376)
T 2aja_A 242 PFIARHV-NRLKEMHD----AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIP 316 (376)
T ss_dssp HHHHHHH-HHHHHHHT----TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSST
T ss_pred HHHHhcC-cccccccH----HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCC
Confidence 7777666 66654432 2233332222 334444444210 001122
Q ss_pred CCCCcHHHHHHHcCChhhHHHHHhcC
Q 007758 338 SDGRTAVAICRRMTRRKDYIEASKQG 363 (590)
Q Consensus 338 ~~G~TpL~~A~~~~~~~~v~~l~~~G 363 (590)
+.+.||||+|++.|+.+++++|+..|
T Consensus 317 n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 317 GDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp TCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred CCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 35668888888888888888888754
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=1.4e-21 Score=193.95 Aligned_cols=128 Identities=24% Similarity=0.257 Sum_probs=111.7
Q ss_pred ccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCCcHHHHHHH
Q 007758 242 EKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKD-ARGRTVLHVAAR 316 (590)
Q Consensus 242 ~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d-~~G~TpLh~Aa~ 316 (590)
..|.||||+|+..|+.++|++|++ | ++ |..|+||||+|+..|+.++|++||+.| +++|.+| ..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHHH
Confidence 389999999999999999999999 7 43 678999999999999999999999998 9999998 889999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcchh---hchHHHHHH
Q 007758 317 RKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKD---WLCIAFLER 378 (590)
Q Consensus 317 ~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~~~---~~~~~~l~~ 378 (590)
.|+.++|++|+++|++++.+|..|+||||+|+..++. ..+.++++. ....++++.
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~-------~~~~~~l~~a~~~g~~~iv~~ 178 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------TPKGNPMQFGRRIGLEKVINV 178 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHTT-------CCCSSHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHhc-------cCCCCHHHHHHHcChHHHHHH
Confidence 9999999999999999999999999999999975433 345555543 344444544
No 95
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=6.6e-21 Score=159.57 Aligned_cols=92 Identities=34% Similarity=0.411 Sum_probs=78.2
Q ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcC
Q 007758 272 DDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMT 351 (590)
Q Consensus 272 ~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~ 351 (590)
+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4788888888888888888888887 888888888888888888888888888888888888888888888888888888
Q ss_pred ChhhHHHHHhcCC
Q 007758 352 RRKDYIEASKQGQ 364 (590)
Q Consensus 352 ~~~~v~~l~~~G~ 364 (590)
+.++++.+++.|+
T Consensus 80 ~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 80 HLEVVKLLLEAGA 92 (93)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 8888888888876
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=6.1e-22 Score=177.95 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=108.4
Q ss_pred ccccccccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC--
Q 007758 193 CIQRIARSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV-- 269 (590)
Q Consensus 193 g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i-- 269 (590)
|+|+ .++..|.||||+|+..+ ...++++|++ +|++++..|. .|+||||+|+..|+.+++++|+++| ++
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~-~~~~~~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKG-DIPSVEYLLQ----NGSDPNVKDH---AGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHT-CHHHHHHHHH----TTCCSCCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCC-CcCCCCCCHHHHHHHcC-CHHHHHHHHH----cCCCCCcCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 5677 67888999999999888 4444555543 6999999888 9999999999999999999999999 44
Q ss_pred -CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 007758 270 -TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGAC 332 (590)
Q Consensus 270 -d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad 332 (590)
|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+++++|.+.+..
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 667899999999999999999999998 99999999999999999999999999888876543
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.4e-21 Score=200.55 Aligned_cols=135 Identities=17% Similarity=0.175 Sum_probs=110.5
Q ss_pred ccccccccCccchhHHHHHHhhhccccCCCcCC------CCcccccCCcHHHHHHhc---CCHHHHHHHHhCC-CC---C
Q 007758 204 NVCLEKELPDEVSSEIKSLRVKSNQESEANIKE------VDPMHEKRVRRIHKALDS---DDFELLNLLLNEY-EV---T 270 (590)
Q Consensus 204 ~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~------~d~~~~~g~t~Lh~A~~~---g~~~~v~~LL~~g-~i---d 270 (590)
.++|+.|+..+....+..++. .|++++. .+. .|.||||+|+.. |+.+++++|+++| ++ |
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~-----~g~d~~~~~~~~~~~~---~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d 223 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFA-----NGQDFGQPLPGPDAQA---PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA 223 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH-----TTCCTTSCEECSSSCS---CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCC
T ss_pred HHHHhhhhhccCHHHHHHHHh-----cCCcccccCCCcccCC---CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCC
Confidence 455777776664555555554 6888876 455 999999999997 8999999999999 44 6
Q ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHc
Q 007758 271 LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRM 350 (590)
Q Consensus 271 ~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~ 350 (590)
..|+||||+|+..|+.++|++||+.| ++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+.+
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~ 296 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSW 296 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhc
Confidence 78999999999999999999999998 99999999999999999999999999999999987 589999999998
Q ss_pred CCh
Q 007758 351 TRR 353 (590)
Q Consensus 351 ~~~ 353 (590)
|+.
T Consensus 297 g~~ 299 (301)
T 2b0o_E 297 VIS 299 (301)
T ss_dssp ---
T ss_pred CCc
Confidence 864
No 98
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.6e-20 Score=190.35 Aligned_cols=123 Identities=17% Similarity=0.209 Sum_probs=116.4
Q ss_pred cCCcHHHHHHhcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCc
Q 007758 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRT 309 (590)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---------d~~G~TpLh~Aa~~---g~~~iv~~LL~~g~advn~~d~~G~T 309 (590)
...++|+.|+..|+.+.++.++..| ++ +..|+||||+|+.. |+.+++++|++.| +++|.+|..|+|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~T 207 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCC
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCC
Confidence 5578999999999999999999999 42 56799999999999 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 310 VLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 310 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
|||+|+..|+.++|++||++||+++.+|.+|+||||+|+..|+.++++++++.|+..
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999999999999999999999998754
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=4.4e-23 Score=217.95 Aligned_cols=193 Identities=13% Similarity=0.009 Sum_probs=147.5
Q ss_pred CCceeeeecccccccccccCCCCCCchHHHHHHHc-Cc----HHHHhcccccccccCCCccccccccCccchhHHHHHHh
Q 007758 150 QITELVSYFQCLLLILAENAPVEDVIPILVAALHC-QL----NRLHSCCIQRIARSNLDNVCLEKELPDEVSSEIKSLRV 224 (590)
Q Consensus 150 ~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~-g~----~~Ll~~g~di~~~d~~g~t~L~~A~~~~~~~~i~~lL~ 224 (590)
+..+.+..++.+..+++... + .+++++|... +. ..++++|++. .||||+|+..| ..+++++|+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~--~--ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G-~~e~v~~Ll 112 (376)
T 2aja_A 45 SYKEAIHIFLPGTKNMEQVR--Q--LLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITG-CSSALDTLC 112 (376)
T ss_dssp CHHHHHHHCCCCSSHHHHHH--H--HHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHC-CHHHHHHHT
T ss_pred cHHHHHHHHhcCCCCHHHHH--H--HHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcC-CHHHHHHHH
Confidence 34455555555555554321 1 5677777653 33 2666666654 59999999988 555555555
Q ss_pred hhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-C-----CCCCCccHHHHHHHcCCHHHHHHHHHcCCC
Q 007758 225 KSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-E-----VTLDDAFALHYAAAYCNPKVFKEVLNMGLA 298 (590)
Q Consensus 225 ~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~-----id~~G~TpLh~Aa~~g~~~iv~~LL~~g~a 298 (590)
+ +|+.....+..+..|.||||+|+..|+.++|++|+++| + ++..++||||+||..|+.++|++|++.| +
T Consensus 113 ~----~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~g-a 187 (376)
T 2aja_A 113 L----LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA-P 187 (376)
T ss_dssp T----C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSC-G
T ss_pred H----cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcC-C
Confidence 3 56633322223448899999999999999999999999 3 3333499999999999999999999998 9
Q ss_pred Cccc--cCCCCCcHHHHHH-HcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 007758 299 DLNL--KDARGRTVLHVAA-RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQET 366 (590)
Q Consensus 299 dvn~--~d~~G~TpLh~Aa-~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~ 366 (590)
+++. +|..|+||||+|+ ..|+.++|++|+++|++ |.||||+|+..|+.++++++.+.|+..
T Consensus 188 ~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 188 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp GGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred ccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 9988 9999999999999 99999999999998853 899999999999999999999988654
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=2e-21 Score=189.26 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=104.2
Q ss_pred ccCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhC-C-C---CCCCC
Q 007758 199 RSNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNE-Y-E---VTLDD 273 (590)
Q Consensus 199 ~d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~-g-~---id~~G 273 (590)
.+..|.||||+|+..+... ++++|++ +|++++..|. .|+||||+|+..|+.++|++|++. | + .|..|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~-~v~~Ll~----~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g 140 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLS-WLRECLD----NRVGVNGLDK---AGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLG 140 (222)
T ss_dssp HEEEESCHHHHHHHHTCHH-HHHHHHH----TTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTS
T ss_pred cccccccccccccccCcHH-HHHHHHh----CCCCccccCC---CCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCC
Confidence 4567888999998888444 4444442 6999999888 999999999999999999999998 6 4 37889
Q ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCC
Q 007758 274 AFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGR 341 (590)
Q Consensus 274 ~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~ 341 (590)
+||||+|+..|+.++|++||+.| ++++.+|..|+||||+|+..|+.++++.|++.|++.+..+.+|+
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999999999999999998 99999999999999999999999999999999999988776654
No 101
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.9e-20 Score=203.92 Aligned_cols=125 Identities=22% Similarity=0.241 Sum_probs=114.7
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHH---cCCHHHHHHHHHcCCCCccccCCCCCcH
Q 007758 244 RVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAA---YCNPKVFKEVLNMGLADLNLKDARGRTV 310 (590)
Q Consensus 244 g~t~Lh~A~~~g~~~~v~~LL~~g-~i---------d~~G~TpLh~Aa~---~g~~~iv~~LL~~g~advn~~d~~G~Tp 310 (590)
..+.||.|+..|+.++|+.||+.| ++ |..|+||||+||. .|+.++|++||+.| +|+|.+|..|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 347899999999999999999999 54 5679999999976 89999999999998 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCCCcchh
Q 007758 311 LHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQETNKD 369 (590)
Q Consensus 311 Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~~~~~~ 369 (590)
||+||..|+.++|++||++||++|.+|.+|+||||+|+..|+.++++++++.|+++...
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999987753
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.2e-20 Score=154.65 Aligned_cols=89 Identities=37% Similarity=0.477 Sum_probs=83.8
Q ss_pred cCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC
Q 007758 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRK 318 (590)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g 318 (590)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 43 678999999999999999999999998 999999999999999999999
Q ss_pred CHHHHHHHHhCCCC
Q 007758 319 EPAVLETLLSKGAC 332 (590)
Q Consensus 319 ~~~iv~~LL~~Gad 332 (590)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999986
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=7.1e-20 Score=187.74 Aligned_cols=121 Identities=21% Similarity=0.266 Sum_probs=113.3
Q ss_pred cCCcHHHHHHhcCCHHHHHHHHhCC-CC---------CCCCccHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCc
Q 007758 243 KRVRRIHKALDSDDFELLNLLLNEY-EV---------TLDDAFALHYAAAY---CNPKVFKEVLNMGLADLNLKDARGRT 309 (590)
Q Consensus 243 ~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---------d~~G~TpLh~Aa~~---g~~~iv~~LL~~g~advn~~d~~G~T 309 (590)
.+.++||.|+..|+.+.|+.|++.| ++ +..|+||||+|+.. |+.+++++||+.| +++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 4567899999999999999999999 43 56799999999997 8999999999998 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 310 VLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 310 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
|||+|+..|+.++|++||++||+++.+|..|+||||+|+..++.++++++++.|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999988664
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=5.7e-20 Score=193.46 Aligned_cols=121 Identities=21% Similarity=0.169 Sum_probs=115.1
Q ss_pred cCCcHHHHHHhc-CCHHHHHHHHhCC-CC---C--CCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Q 007758 243 KRVRRIHKALDS-DDFELLNLLLNEY-EV---T--LDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAA 315 (590)
Q Consensus 243 ~g~t~Lh~A~~~-g~~~~v~~LL~~g-~i---d--~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa 315 (590)
.+.|+||+|+.. |+.+++++||++| ++ + ..|.||||+|+..|+.++|++||+.| +++|.+|..|+||||+|+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH
Confidence 568999999999 9999999999999 54 3 67999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhhHHHHHhcCC
Q 007758 316 RRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKDYIEASKQGQ 364 (590)
Q Consensus 316 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~v~~l~~~G~ 364 (590)
..|+.++|++||++||+++.+|.+|+||||+|+..++.++++++...|.
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999988764
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=1.4e-20 Score=163.63 Aligned_cols=103 Identities=24% Similarity=0.299 Sum_probs=94.3
Q ss_pred cccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Q 007758 241 HEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAAR 316 (590)
Q Consensus 241 ~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~ 316 (590)
|.+|.||||+|+..|+.+++++|+++| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+.
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHH
Confidence 449999999999999999999999999 43 678999999999999999999999998 9999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcCCCCCCcHH
Q 007758 317 RKEPAVLETLLSKGACASETTSDGRTAV 344 (590)
Q Consensus 317 ~g~~~iv~~LL~~Gadvn~~d~~G~TpL 344 (590)
.|+.+++++|+++|+++|.++..|.||-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999884
No 106
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=6.6e-20 Score=161.52 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=94.3
Q ss_pred cCCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCcc
Q 007758 200 SNLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAF 275 (590)
Q Consensus 200 d~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~T 275 (590)
+..|.||||+|+..+....+..++. +|++++..|. .|+||||+|+..|+.+++++|++.| ++ |..|+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~-----~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 75 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA-----KGEDVNRTLE---GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT 75 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH-----TTCCTTSCCT---TSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH-----cCCCcCccCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 3557788888888884444444443 6899998887 9999999999999999999999999 43 678999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHH
Q 007758 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPA 321 (590)
Q Consensus 276 pLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~ 321 (590)
|||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..+..+
T Consensus 76 pL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLSKG-ADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHhCCHHHHH
Confidence 999999999999999999998 999999999999999995443333
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=1.9e-19 Score=189.53 Aligned_cols=146 Identities=18% Similarity=0.168 Sum_probs=109.4
Q ss_pred ccCCCccccccccCc-cchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCC
Q 007758 199 RSNLDNVCLEKELPD-EVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDD 273 (590)
Q Consensus 199 ~d~~g~t~L~~A~~~-~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G 273 (590)
....+.|+||.|+.. +....+..++. +|+++|..+ .+..|.||||+|+..|+.++|++|+++| ++ |..|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~-----~Gadvn~~~-~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALA-----HGADVNWVN-GGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHH-----TTCCTTCCC-TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHH-----cCCCCCccc-cccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 344567899999998 75555555554 799999988 1239999999999999999999999999 44 6789
Q ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCCCcCCCCCCcHHHHHHHc
Q 007758 274 AFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKG---ACASETTSDGRTAVAICRRM 350 (590)
Q Consensus 274 ~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G---advn~~d~~G~TpL~~A~~~ 350 (590)
+||||+|+..|+.++|++||+.| ++++.+|..|+||||+|+..|+.+++++|+..| ++....+..+.|+++++..+
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999998 999999999999999999999999999999876 44556678889999998876
Q ss_pred C
Q 007758 351 T 351 (590)
Q Consensus 351 ~ 351 (590)
.
T Consensus 348 ~ 348 (368)
T 3jue_A 348 S 348 (368)
T ss_dssp -
T ss_pred H
Confidence 5
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=1.5e-19 Score=198.12 Aligned_cols=134 Identities=17% Similarity=0.186 Sum_probs=100.7
Q ss_pred cccccccCccchhHHHHHHhhhccccCCCcCCC---CcccccCCcHHHHHHh---cCCHHHHHHHHhCC-CC---CCCCc
Q 007758 205 VCLEKELPDEVSSEIKSLRVKSNQESEANIKEV---DPMHEKRVRRIHKALD---SDDFELLNLLLNEY-EV---TLDDA 274 (590)
Q Consensus 205 t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~---d~~~~~g~t~Lh~A~~---~g~~~~v~~LL~~g-~i---d~~G~ 274 (590)
+.||.|+..+....+..++. +|+++|.. ...+..|.||||+||. .|+.++|++||++| ++ |..|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~-----~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFA-----NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHH-----TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSC
T ss_pred HHHHHHHhccCHHHHHHHHh-----hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCC
Confidence 34555555453444444444 57777655 0123499999999966 89999999999999 54 67899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHc
Q 007758 275 FALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRM 350 (590)
Q Consensus 275 TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~ 350 (590)
||||+|+..|+.++|++||+.| ||+|.+|..|+||||+|+..|+.+++++|+++||+++. +|+|.+..+
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYSW 277 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-------------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeeccc
Confidence 9999999999999999999998 99999999999999999999999999999999999987 466665543
No 109
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=2.8e-19 Score=169.00 Aligned_cols=135 Identities=19% Similarity=0.217 Sum_probs=116.1
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---C-CCCcc
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAF 275 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d-~~G~T 275 (590)
..|.||||+|+..+ ...+++.|+ .|+++|..|. .|+||||+|+..|+.+++++|+++| ++ + ..|+|
T Consensus 42 ~~g~t~L~~A~~~g-~~~~v~~Ll-----~~~~~~~~d~---~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~t 112 (183)
T 3deo_A 42 SEYETPWWTAARKA-DEQALSQLL-----EDRDVDAVDE---NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHTT-CHHHHHHHT-----TTSCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCC
T ss_pred CCCCCHHHHHHHcC-CHHHHHHHH-----hcCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCC
Confidence 45677888887777 444555555 3788998887 9999999999999999999999999 44 4 77999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhh
Q 007758 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKD 355 (590)
Q Consensus 276 pLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~ 355 (590)
|||+|+..|+.+++++|++.| ++++.+|..|+||||+|+..++. ..+.+||++|+..|+.++
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHH
Confidence 999999999999999999998 99999999999999999975432 467899999999999999
Q ss_pred HHHHHhc
Q 007758 356 YIEASKQ 362 (590)
Q Consensus 356 v~~l~~~ 362 (590)
++.+.++
T Consensus 175 ~~~L~~~ 181 (183)
T 3deo_A 175 INVLEGQ 181 (183)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9988764
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.77 E-value=3.1e-19 Score=177.01 Aligned_cols=138 Identities=20% Similarity=0.212 Sum_probs=119.0
Q ss_pred CCCccccccccCccchhHHHHHHhhhccccCCCcCCCCcccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---C-CCCcc
Q 007758 201 NLDNVCLEKELPDEVSSEIKSLRVKSNQESEANIKEVDPMHEKRVRRIHKALDSDDFELLNLLLNEY-EV---T-LDDAF 275 (590)
Q Consensus 201 ~~g~t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~d~~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d-~~G~T 275 (590)
..|.||||+|+..+ ...+++.|+ .|+++|..|. .|+||||+|+..|+.++|++|+++| ++ + ..|+|
T Consensus 43 ~~g~t~L~~A~~~g-~~~~v~~Ll-----~~~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETPWWTAARKA-DEQALSQLL-----EDRDVDAVDE---NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHTTT-CHHHHHHTT-----TTCCTTCBCT---TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCC
T ss_pred cCCCCHHHHHHHcC-CHHHHHHHH-----cCCCCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCC
Confidence 45678888888777 445555555 3888998887 9999999999999999999999999 54 3 67999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHcCChhh
Q 007758 276 ALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICRRMTRRKD 355 (590)
Q Consensus 276 pLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~~~~~~ 355 (590)
|||+|+..|+.++|++|++.| +++|.+|..|+||||+|+..++ +..|.||||+|+..|+.++
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~i 175 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKV 175 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHH
Confidence 999999999999999999998 9999999999999999996322 3578999999999999999
Q ss_pred HHHHHhcCCC
Q 007758 356 YIEASKQGQE 365 (590)
Q Consensus 356 v~~l~~~G~~ 365 (590)
++.+.+.+..
T Consensus 176 v~~L~~~~~~ 185 (244)
T 3ui2_A 176 INVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHEE
T ss_pred HHHHHHhccc
Confidence 9999987544
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=6.1e-19 Score=153.25 Aligned_cols=99 Identities=27% Similarity=0.386 Sum_probs=95.4
Q ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHH
Q 007758 269 VTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAICR 348 (590)
Q Consensus 269 id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~ 348 (590)
.|.+|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4788999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred HcCChhhHHHHHhcCCCcch
Q 007758 349 RMTRRKDYIEASKQGQETNK 368 (590)
Q Consensus 349 ~~~~~~~v~~l~~~G~~~~~ 368 (590)
..++.++++.+++.|+++..
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~ 103 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNA 103 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHH
T ss_pred HCCCHHHHHHHHHcCCCCCc
Confidence 99999999999999998753
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.75 E-value=2.5e-18 Score=174.22 Aligned_cols=123 Identities=20% Similarity=0.227 Sum_probs=100.9
Q ss_pred cccccccCccchhHHHHHHhhhccccCCCcCCC---CcccccCCcHHHHHHhc---CCHHHHHHHHhCC-CC---CCCCc
Q 007758 205 VCLEKELPDEVSSEIKSLRVKSNQESEANIKEV---DPMHEKRVRRIHKALDS---DDFELLNLLLNEY-EV---TLDDA 274 (590)
Q Consensus 205 t~L~~A~~~~~~~~i~~lL~~~~~~~Gadin~~---d~~~~~g~t~Lh~A~~~---g~~~~v~~LL~~g-~i---d~~G~ 274 (590)
++|+.|+..+....+..++. .|++++.. +..+..|.||||+|+.. |+.+++++|+++| ++ |..|+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~-----~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~ 206 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYA-----DGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-----TTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCC
T ss_pred hhhhhHhhhcccHHHHHHHH-----hhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCC
Confidence 44555555553444444443 56664432 22344899999999999 8999999999999 44 67899
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 007758 275 FALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACA 333 (590)
Q Consensus 275 TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadv 333 (590)
||||+|+..|+.++|++||+.| +|+|.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999988 999999999999999999999999999999999863
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=3.3e-18 Score=147.94 Aligned_cols=91 Identities=27% Similarity=0.220 Sum_probs=79.0
Q ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCcHHHHH
Q 007758 268 EVTLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAARRKEPAVLETLLSKGACASETTSDGRTAVAIC 347 (590)
Q Consensus 268 ~id~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A 347 (590)
+.|.+|.||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 45778889999999999999999999887 89999999999999999999999999999999999999999999999999
Q ss_pred HHcCChhhHHHH
Q 007758 348 RRMTRRKDYIEA 359 (590)
Q Consensus 348 ~~~~~~~~v~~l 359 (590)
+..|+.++++++
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999888888764
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=1.5e-16 Score=137.42 Aligned_cols=86 Identities=22% Similarity=0.310 Sum_probs=80.2
Q ss_pred ccccCCcHHHHHHhcCCHHHHHHHHhCC-CC---CCCCccHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Q 007758 240 MHEKRVRRIHKALDSDDFELLNLLLNEY-EV---TLDDAFALHYAAAYCNPKVFKEVLNMGLADLNLKDARGRTVLHVAA 315 (590)
Q Consensus 240 ~~~~g~t~Lh~A~~~g~~~~v~~LL~~g-~i---d~~G~TpLh~Aa~~g~~~iv~~LL~~g~advn~~d~~G~TpLh~Aa 315 (590)
.+.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHHHHH
Confidence 4449999999999999999999999999 43 678999999999999999999999998 999999999999999999
Q ss_pred HcCCHHHHHHH
Q 007758 316 RRKEPAVLETL 326 (590)
Q Consensus 316 ~~g~~~iv~~L 326 (590)
..|+.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 115
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.53 E-value=9e-15 Score=128.56 Aligned_cols=92 Identities=23% Similarity=0.282 Sum_probs=76.2
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.++|+.|+|||+|||+|||||++||.++.. .. +...++.+++|..+|+|+|+|++...+
T Consensus 22 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-------~~------i~l~~~~~~~f~~ll~~iYtg~~~~~~ 88 (119)
T 3b84_A 22 GQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGSG-------GS------VVLPAGFAEIFGLLLDFFYTGHLALTS 88 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTTC-------CC------EEECGGGHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCCC-------Ce------EEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 68999999999999999999999999999999997631 12 555678899999999999999886533
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~ 161 (590)
.. +.+++.+|..++++.+.+.+.+.
T Consensus 89 ~~--------------------v~~ll~~A~~~~i~~L~~~C~~~ 113 (119)
T 3b84_A 89 GN--------------------RDQVLLAARELRVPEAVELCQSF 113 (119)
T ss_dssp TT--------------------HHHHHHHHHHTTCHHHHHHHHHC
T ss_pred HH--------------------HHHHHHHHHHhCcHHHHHHHHHH
Confidence 22 55889999999998887766544
No 116
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.52 E-value=1.3e-14 Score=128.93 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=77.3
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceec-cccchhHHHHHHHHHHhCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGMTKE 114 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~-~~v~~e~l~~vL~yLYtG~l~~ 114 (590)
...+|||+|.|+|+.|+|||+|||+|||||++||.+... +.... +.+ .++.+++|..+|+|+|+|++..
T Consensus 26 ~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~----e~~~~------i~l~~~~~~~~f~~ll~~~Ytg~~~~ 95 (127)
T 1r29_A 26 RDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLK----RNLSV------INLDPEINPEGFNILLDFMYTSRLNL 95 (127)
T ss_dssp TTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTT----TTCSE------EECCTTSCHHHHHHHHHHHHHSCCCC
T ss_pred cCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCcc----CCCCE------EEeCCCCCHHHHHHHHHHHcCCCcCc
Confidence 368999999999999999999999999999999998733 22233 455 6789999999999999998765
Q ss_pred CCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 115 SPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 115 ~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
.+. .+.+++.+|..++++.+.+.+.+
T Consensus 96 ~~~--------------------~~~~ll~~A~~~~i~~L~~~c~~ 121 (127)
T 1r29_A 96 REG--------------------NIMAVMATAMYLQMEHVVDTCRK 121 (127)
T ss_dssp CTT--------------------THHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHH--------------------HHHHHHHHHHHhCCHHHHHHHHH
Confidence 332 25688999999999888766543
No 117
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.52 E-value=9.4e-15 Score=128.53 Aligned_cols=94 Identities=22% Similarity=0.308 Sum_probs=74.0
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.|+|+.|+|||+||++|||||++||.++..+ ... ..+...++.+++|..+|+|+|+|++...+
T Consensus 23 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e----~~~-----~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~ 93 (120)
T 2if5_A 23 GLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVV----DQQ-----NVYEIDFVSAEALTALMDFAYTATLTVST 93 (120)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC---------CC-----SEEECCSSCHHHHHHHHHHHHHSCCCCCG
T ss_pred CCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccc----cCC-----ceEEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 679999999999999999999999999999999976432 211 13555678999999999999999876432
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQ 159 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll 159 (590)
+.+.+++.+|..++++.+.+.+.
T Consensus 94 --------------------~~~~~ll~~A~~~~i~~L~~~C~ 116 (120)
T 2if5_A 94 --------------------ANVGDILSAARLLEIPAVSHVCA 116 (120)
T ss_dssp --------------------GGHHHHHHHHHHTTCHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 22568899999999988876553
No 118
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=125.36 Aligned_cols=95 Identities=20% Similarity=0.227 Sum_probs=74.1
Q ss_pred CCCccceEEEECC----eEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCC
Q 007758 36 GEPWLDAEIVVEG----KSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGM 111 (590)
Q Consensus 36 ~~~~sDv~i~v~g----~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~ 111 (590)
+..+|||+|.|+| +.|+|||+|||+|||||++||.+...+ +.. .+...++.+++|..+|+|+|+|+
T Consensus 5 ~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e----~~~------~i~l~~~~~~~f~~~l~~iYt~~ 74 (109)
T 2vkp_A 5 NELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAE----VKS------EIHIPDVEPAAFLILLKYMYSDE 74 (109)
T ss_dssp CCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------CC------EEEETTSCHHHHHHHHHHHHHCC
T ss_pred CCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCccc----CCC------eEEeCCCCHHHHHHHHHHHcCCC
Confidence 4689999999998 899999999999999999999987443 222 35566789999999999999998
Q ss_pred CCCCCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 112 TKESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 112 l~~~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
+...+.. +.+++.+|..++++.+.+.+.+
T Consensus 75 ~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~ 103 (109)
T 2vkp_A 75 IDLEADT--------------------VLATLYAAKKYIVPALAKACVN 103 (109)
T ss_dssp CCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHH
Confidence 8654322 5688999999999887766543
No 119
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.51 E-value=6.7e-15 Score=129.78 Aligned_cols=90 Identities=22% Similarity=0.316 Sum_probs=74.6
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.|+|+.|+|||+|||+|||||++||.++.. . +...++.+++|..+|+|+|+|++...+
T Consensus 26 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~--------~------i~l~~~~~~~f~~ll~~~Ytg~~~~~~ 91 (121)
T 1buo_A 26 GTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQ--------H------YTLDFLSPKTFQQILEYAYTATLQAKA 91 (121)
T ss_dssp TTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSCCS--------E------EEECSSCHHHHHHHHHHHHHSCCCCCG
T ss_pred CCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCCCc--------E------EEeCCCCHHHHHHHHHhhcCCCcCCCH
Confidence 68999999999999999999999999999999986411 2 455678999999999999999876432
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
. .+.+++.+|..++++.+.+.+.+
T Consensus 92 ~--------------------~~~~ll~~A~~~~i~~L~~~c~~ 115 (121)
T 1buo_A 92 E--------------------DLDDLLYAAEILEIEYLEEQCLK 115 (121)
T ss_dssp G--------------------GHHHHHHHHHHHTCHHHHHHHHH
T ss_pred H--------------------HHHHHHHHHHHHCCHHHHHHHHH
Confidence 1 25688999999999887766543
No 120
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.50 E-value=1.4e-14 Score=130.33 Aligned_cols=94 Identities=22% Similarity=0.271 Sum_probs=75.8
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
+..||||+|.|+|+.|+|||+|||+||+||++||.+... . .+.+.++.+++|..+|+|+|+|++...
T Consensus 22 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~-------~------~i~l~~~~~~~f~~lL~fiYtg~~~i~ 88 (135)
T 2yy9_A 22 KGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGTG-------G------SVVLPAGFAEIFGLLLDFFYTGHLALT 88 (135)
T ss_dssp TTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------C------CEEECGGGHHHHHHHHHHHHHSCCCCC
T ss_pred cCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCCC-------C------eEEeCCCCHHHHHHHHHHHhCCCCCCC
Confidence 368999999999999999999999999999999997631 1 255567889999999999999987653
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g 162 (590)
+.. +.+++.+|..+++..+.+.+.+..
T Consensus 89 ~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l 115 (135)
T 2yy9_A 89 SGN--------------------RDQVLLAAKELRVPEAVELCQSFQ 115 (135)
T ss_dssp TTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred HHH--------------------HHHHHHHHHHhCcHHHHHHHHHHH
Confidence 322 568899999999998877765554
No 121
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.50 E-value=2.1e-14 Score=125.52 Aligned_cols=93 Identities=18% Similarity=0.317 Sum_probs=74.4
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.|+|+.|+|||+|||+|||||++||.+.. ...+. ++..++.+++|..+|+|+|+|++...+
T Consensus 20 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~-------~~~i~----l~~~~~~~~~f~~ll~~~Yt~~~~~~~ 88 (116)
T 2vpk_A 20 GFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRSTS-------ENNVF----LDQSQVKADGFQKLLEFIYTGTLNLDS 88 (116)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCC-------CSCEE----CCTTTCCHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCCC-------CCeEE----eecCCCCHHHHHHHHHHHcCCCcccCH
Confidence 6799999999999999999999999999999998761 12211 222378999999999999999876533
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
. .+.+++.+|..++++.+.+.+.+
T Consensus 89 ~--------------------~v~~ll~~A~~~~i~~L~~~C~~ 112 (116)
T 2vpk_A 89 W--------------------NVKEIHQAADYLKVEEVVTKCKI 112 (116)
T ss_dssp T--------------------THHHHHHHHHHTTCHHHHHHHHH
T ss_pred H--------------------HHHHHHHHHHHhCCHHHHHHHHH
Confidence 2 25688999999999888765543
No 122
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.50 E-value=1.1e-14 Score=127.90 Aligned_cols=89 Identities=18% Similarity=0.331 Sum_probs=73.8
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.++|+.|+|||+|||+||+||++||.+.. .. +...++.+++|..+|+|+|+|++...+
T Consensus 25 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~~--------~~------i~l~~~~~~~f~~ll~~~Ytg~~~i~~ 90 (119)
T 2q81_A 25 GLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQK--------DV------VHLDISNAAGLGQVLEFMYTAKLSLSP 90 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC--------SG------GGGGGCCHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCCC--------CE------EEeCCCCHHHHHHHHHHHcCCCCccCH
Confidence 6799999999999999999999999999999999741 12 344467889999999999999886543
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQ 159 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll 159 (590)
.. +.+++.+|..++++.+.+.+.
T Consensus 91 ~~--------------------~~~ll~~A~~l~i~~L~~~C~ 113 (119)
T 2q81_A 91 EN--------------------VDDVLAVATFLQMQDIITACH 113 (119)
T ss_dssp TT--------------------HHHHHHHHHHTTCHHHHHHHH
T ss_pred HH--------------------HHHHHHHHHHhCCHHHHHHHH
Confidence 22 568899999999988876654
No 123
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.50 E-value=1.5e-14 Score=131.51 Aligned_cols=98 Identities=16% Similarity=0.306 Sum_probs=75.5
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
+..||||+|.|+|+.|+|||+||||||+||++||.+...+. ..... .+.+.++.+++|..+|+|+|+|++...
T Consensus 44 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~-e~~~~------~I~l~~v~~~~f~~lL~fiYtg~~~i~ 116 (144)
T 2ppi_A 44 ESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKD-DGSTY------KIELEGISVMVMREILDYIFSGQIRLN 116 (144)
T ss_dssp --CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCC------EEECCSSCHHHHHHHHHHHTTSCCCCC
T ss_pred cCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccc-cCCCc------EEEeCCCCHHHHHHHHHHHhCCCCCCC
Confidence 57899999999999999999999999999999999764320 00112 355667899999999999999988643
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
+. .+.+++.+|..++++.+.+.+.+
T Consensus 117 ~~--------------------~v~~ll~~A~~l~i~~L~~~C~~ 141 (144)
T 2ppi_A 117 ED--------------------TIQDVVQAADLLLLTDLKTLCCE 141 (144)
T ss_dssp TT--------------------THHHHHHHHHHTTCHHHHHHHHT
T ss_pred HH--------------------HHHHHHHHHHHhCcHHHHHHHHH
Confidence 22 25688999999999888766543
No 124
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.50 E-value=2.5e-14 Score=129.11 Aligned_cols=95 Identities=20% Similarity=0.288 Sum_probs=77.5
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceec-cccchhHHHHHHHHHHhCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~-~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
..+|||+|.|+|+.|+|||+||||||+||++||.+...+ . .. +.. .++.++.|..+|+|+|+|++...
T Consensus 34 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e----~-~~------i~l~~~v~~~~~~~lL~~~Ytg~~~i~ 102 (138)
T 2z8h_A 34 DVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA----E-LT------VTLPEEVTVKGFEPLIQFAYTAKLILS 102 (138)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT----T-EE------EECCTTSCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC----C-ce------EEeCCCCCHHHHHHHHHHhcCCCcccC
Confidence 689999999999999999999999999999999987432 1 22 344 37889999999999999987654
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g 162 (590)
+.. +.+++.+|..++++.+.+.+.+..
T Consensus 103 ~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l 129 (138)
T 2z8h_A 103 KDN--------------------VDEVCRCVEFLSVHNIEESCFQFL 129 (138)
T ss_dssp TTT--------------------HHHHHHHHHHHTCGGGHHHHHHHT
T ss_pred HHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 322 568899999999998877765544
No 125
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=127.58 Aligned_cols=94 Identities=20% Similarity=0.286 Sum_probs=75.3
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceec-cccchhHHHHHHHHHHhCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPH-GKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~-~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
..+|||+|.|+|+.|+|||+|||||||||++||.+...+ . .. +.. .++.+++|..+|+|+|+|++...
T Consensus 27 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e----~-~~------i~l~~~v~~~~f~~lL~~iYtg~~~i~ 95 (124)
T 2ihc_A 27 DVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG----E-LN------ITLPEEVTVKGFEPLIQFAYTAKLILS 95 (124)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC-------C-EE------EECCTTSCHHHHHHHHHHHHHSEEEEE
T ss_pred CCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC----C-ce------EeecCCcCHHHHHHHHHHhcCCCcccC
Confidence 579999999999999999999999999999999987432 1 12 344 37899999999999999987543
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~ 161 (590)
+. .+.+++.+|..++++.+.+.+.+.
T Consensus 96 ~~--------------------~v~~ll~~A~~~~~~~L~~~C~~~ 121 (124)
T 2ihc_A 96 KE--------------------NVDEVCKCVEFLSVHNIEESCFQF 121 (124)
T ss_dssp TT--------------------THHHHHHHHHHHTBSSCCGGGGGT
T ss_pred HH--------------------HHHHHHHHHHHHCCHHHHHHHHHH
Confidence 21 256889999999999988776543
No 126
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.49 E-value=2.6e-14 Score=126.70 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=76.5
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccc-cchhHHHHHHHHHHhCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGK-VGFEAFNDILLYLYTGMTKE 114 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~-v~~e~l~~vL~yLYtG~l~~ 114 (590)
+..||||+|.|+|+.|+|||+|||+||+||++||.+...+ .. .+...+ +.+++|..+|+|+|+|++..
T Consensus 29 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~------~i~l~~~~~~~~f~~~l~~iYtg~~~~ 97 (125)
T 3ohu_A 29 KDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DL------VVSLPEEVTARGFGPLLQFAYTAKLLL 97 (125)
T ss_dssp HTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SC------EEECCTTCCHHHHHHHHHHHTTSEEEE
T ss_pred cCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----Cc------EEEeCCCCCHHHHHHHHHhHcCCceEE
Confidence 3689999999999999999999999999999999986331 12 245555 89999999999999998754
Q ss_pred CCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 115 SPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 115 ~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
.+.. +.+++.+|..+++..+.+.+.+
T Consensus 98 ~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 98 SREN--------------------IREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp CTTT--------------------HHHHHHHHHHHTBSSCTTSSCC
T ss_pred CHHH--------------------HHHHHHHHHHhCCHHHHHHHHH
Confidence 3322 5688999999999988776654
No 127
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.48 E-value=2.6e-14 Score=133.65 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=100.6
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..||||+|.|+|+.|+|||+||++||+||++||.+...+ ... ..+...++.+++|..+|+|+|+|++...+
T Consensus 32 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e----~~~-----~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~ 102 (172)
T 3htm_A 32 SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE----SKK-----NRVEINDVEPEVFKEMMCFIYTGKAPNLD 102 (172)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCG----GGT-----TEEEECSSCHHHHHHHHHHHHHSCCTTGG
T ss_pred CCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccc----cCC-----CeEEecCCCHHHHHHHHHHHhCCCCCCcH
Confidence 679999999999999999999999999999999987433 221 13555678999999999999999875322
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcHHHHhccccc
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSCCIQR 196 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~~Ll~~g~di 196 (590)
+.+.+++.+|..++++.+.+.+.+...... ...+....+.+|..++...|.+.+.+.
T Consensus 103 --------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~A~~~~~~~L~~~~~~~ 159 (172)
T 3htm_A 103 --------------------KMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQLKTQAVDF 159 (172)
T ss_dssp --------------------GTHHHHHHHHHHTTCHHHHHHHHHHHHHTC---CTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 225688999999999998877766554321 223447788999999998888777665
Q ss_pred cc
Q 007758 197 IA 198 (590)
Q Consensus 197 ~~ 198 (590)
..
T Consensus 160 i~ 161 (172)
T 3htm_A 160 IN 161 (172)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 128
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.48 E-value=4e-14 Score=126.24 Aligned_cols=94 Identities=26% Similarity=0.395 Sum_probs=74.6
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceecc-ccchhHHHHHHHHHHhCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHG-KVGFEAFNDILLYLYTGMTKE 114 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~-~v~~e~l~~vL~yLYtG~l~~ 114 (590)
+..+|||+|.|+|+.|+|||+|||+||+||++||.+... .. +.+. ++.+++|..+|+|+|+|++..
T Consensus 30 ~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~~~-------~~------i~l~~~~~~~~f~~ll~~iYtg~~~i 96 (129)
T 3ga1_A 30 QGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSRS-------AV------VELPAAVQPQSFQQILSFCYTGRLSM 96 (129)
T ss_dssp TTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHCCC-------SE------EECCTTCCHHHHHHHHHHHHHSEEEC
T ss_pred cCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCCCC-------CE------EEECCCCCHHHHHHHHHHHhCCcccc
Confidence 367999999999999999999999999999999997611 22 4553 789999999999999998765
Q ss_pred CCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccccc
Q 007758 115 SPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (590)
Q Consensus 115 ~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g 162 (590)
.+.. +.+++.+|..++++.+.+.+.+..
T Consensus 97 ~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~L 124 (129)
T 3ga1_A 97 NVGD--------------------QDLLMYTAGFLQIQEIMEKGTEFF 124 (129)
T ss_dssp CTTT--------------------HHHHHHHHHHTTBTTSSCC-----
T ss_pred CHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3322 567899999999999887765544
No 129
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.46 E-value=3e-14 Score=124.65 Aligned_cols=86 Identities=24% Similarity=0.427 Sum_probs=70.3
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..||||+|.|+|+.|+|||+|||+||+||++||.+... .+...++.++.|..+|+|+|+|++...+
T Consensus 29 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~~~--------------~i~l~~~~~~~f~~~l~~~Ytg~~~~~~ 94 (116)
T 3fkc_A 29 GLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVAGQ--------------VVELSFIRAEIFAEILNYIYSSKIVRVR 94 (116)
T ss_dssp TTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSCCS--------------EEEECSSCHHHHHHHHHHHTTSCCCSCC
T ss_pred CCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCCCC--------------EEEeCCCCHHHHHHHHHhhcCCCcCCCC
Confidence 68999999999999999999999999999999987511 2555678999999999999999873221
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceee
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELV 155 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv 155 (590)
. +.+.+++.+|..++++.+.
T Consensus 95 ~-------------------~~~~~ll~~A~~l~i~~L~ 114 (116)
T 3fkc_A 95 S-------------------DLLDELIKSGQLLGVKFIA 114 (116)
T ss_dssp H-------------------HHHHHHHHHHHHHTCHHHH
T ss_pred H-------------------HHHHHHHHHHHHhCccccC
Confidence 1 2256789999999887654
No 130
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.45 E-value=9.5e-14 Score=138.64 Aligned_cols=132 Identities=20% Similarity=0.315 Sum_probs=95.8
Q ss_pred CCCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCC
Q 007758 35 PGEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKE 114 (590)
Q Consensus 35 ~~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~ 114 (590)
.+..+|||+|.|+|+.|+|||+|||++||||++||.++... .+.. ...+...++.+++|..++.|+|||++..
T Consensus 27 ~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~--~e~~-----~~~i~l~~v~~~~f~~ll~~~Yt~~~~i 99 (256)
T 3hve_A 27 EESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPK--DDGS-----TYKIELEGISVMVMREILDYIFSGQIRL 99 (256)
T ss_dssp C--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------------CEEECSSCCHHHHHHHHHHHHHSCCCC
T ss_pred hcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCc--ccCC-----CCeEEeCCCCHHHHHHHHhhccCCCCcc
Confidence 44789999999999999999999999999999999976431 0111 1236666789999999999999998864
Q ss_pred CCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcHHHHhccc
Q 007758 115 SPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSCCI 194 (590)
Q Consensus 115 ~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~~Ll~~g~ 194 (590)
.+.. +.+++.+|..++++.+.+.+.+...... ..++....+.+|..++...|.+.+.
T Consensus 100 ~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L~~~~~ 156 (256)
T 3hve_A 100 NEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCI---AAENCIGIRDFALHYCLHHVHYLAT 156 (256)
T ss_dssp C-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTC---CSSTTHHHHHHHHHTTCHHHHHHHH
T ss_pred cHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhC---CHhhHHHHHHHHHHcCcHHHHHHHH
Confidence 3322 5688999999999998887766554322 2234578889999999887777665
Q ss_pred cc
Q 007758 195 QR 196 (590)
Q Consensus 195 di 196 (590)
+.
T Consensus 157 ~~ 158 (256)
T 3hve_A 157 EY 158 (256)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 131
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.43 E-value=5.8e-14 Score=127.47 Aligned_cols=121 Identities=23% Similarity=0.355 Sum_probs=77.6
Q ss_pred CCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCC
Q 007758 37 EPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESP 116 (590)
Q Consensus 37 ~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p 116 (590)
..+|||+|.|+|+.|+|||+||++||+||++||.+...+ +. ...+...++.++.|..+|+|+|+|++...+
T Consensus 23 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e----~~-----~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~ 93 (145)
T 4eoz_A 23 SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE----SK-----KNRVEINDVEPEVFKEMMCFIYTGKAPNLD 93 (145)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHH----HH-----HTEEEECSSCHHHHHHHHHHHHHSCCTTGG
T ss_pred CCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcC----CC-----CceEEecCCCHHHHHHHHHhhccCccCCcH
Confidence 578999999999999999999999999999999976322 21 123555678999999999999999875322
Q ss_pred CCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcHHH
Q 007758 117 PEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRL 189 (590)
Q Consensus 117 ~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~~L 189 (590)
+.+.+++.+|..++++.+.+.+.+...... ..++....+.+|..++...|
T Consensus 94 --------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~l~~A~~~~~~~L 143 (145)
T 4eoz_A 94 --------------------KMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQL 143 (145)
T ss_dssp --------------------GTHHHHHHHHHHTTCHHHHHHHHCC----------------------------
T ss_pred --------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHhCHHHh
Confidence 235688999999999988777766553221 12334667777777766443
No 132
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.38 E-value=9e-14 Score=140.66 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=97.3
Q ss_pred CCccceEEEEC---CeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCC
Q 007758 37 EPWLDAEIVVE---GKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTK 113 (590)
Q Consensus 37 ~~~sDv~i~v~---g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~ 113 (590)
..||||+|.|+ |+.|+|||+|||++|+||++||.++..++ ....+.+.++....++.+++|..++.|+|||++.
T Consensus 30 ~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~ 106 (279)
T 3i3n_A 30 GLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIR 106 (279)
T ss_dssp TTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEE
T ss_pred CCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEeccccccCCCCHHHHHHHHHhhCcCCcc
Confidence 68999999998 99999999999999999999999874331 1234444433333479999999999999999875
Q ss_pred CCCCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcHHHHhcc
Q 007758 114 ESPPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSCC 193 (590)
Q Consensus 114 ~~p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~~Ll~~g 193 (590)
..+. .+.+++.+|..++++.+.+.+.+...... ..++....+.+|..++...|.+.+
T Consensus 107 i~~~--------------------~v~~ll~~A~~l~i~~L~~~c~~~L~~~l---~~~n~~~i~~~A~~~~~~~L~~~~ 163 (279)
T 3i3n_A 107 VSTG--------------------SVHEVLELADRFLLIRLKEFCGEFLKKKL---HLSNCVAIHSLAHMYTLSQLALKA 163 (279)
T ss_dssp EETT--------------------THHHHHHHHHHTTCHHHHHHHHHHHHHHC---CTTTHHHHHHHHHHTTCHHHHHHH
T ss_pred cCHH--------------------HHHHHHHHHHHHCcHHHHHHHHHHHHHcC---CcchHHHHHHHHHHcCcHHHHHHH
Confidence 4322 25688999999999998877766654321 223446788899999988777766
Q ss_pred ccc
Q 007758 194 IQR 196 (590)
Q Consensus 194 ~di 196 (590)
.+.
T Consensus 164 ~~~ 166 (279)
T 3i3n_A 164 ADM 166 (279)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 133
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.37 E-value=1.4e-13 Score=120.88 Aligned_cols=88 Identities=18% Similarity=0.148 Sum_probs=71.4
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
+..||||+|.|+|+.|+|||+||||+|+||++ . .. .+...++.+++|..+|+|+|||++...
T Consensus 27 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----~--------~~------~i~l~~v~~~~f~~ll~fiYtg~~~i~ 88 (119)
T 3m5b_A 27 RPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----R--------GQ------WALGEGISPSTFAQLLNFVYGESVELQ 88 (119)
T ss_dssp TTTTCCEEEEETTEEEEECHHHHHTTCGGGCC----C--------EE------EECCSSCCHHHHHHHHHHHTTCCEEEC
T ss_pred cCCCcceEEEECCEEEeeEHHHHHHcCHHHhc----C--------CC------EEEeCCCCHHHHHHHHHHHcCCCcCcC
Confidence 47899999999999999999999999999984 1 01 255567999999999999999987542
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCL 161 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~ 161 (590)
.. .+.+++.+|..+++..+.+.+.+.
T Consensus 89 ~~--------------------~v~~ll~aA~~l~i~~l~~~C~~~ 114 (119)
T 3m5b_A 89 PG--------------------ELRPLQEAARALGVQSLEEACWRA 114 (119)
T ss_dssp GG--------------------GHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HH--------------------HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 21 256889999999999887766543
No 134
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.36 E-value=3.1e-13 Score=138.87 Aligned_cols=131 Identities=22% Similarity=0.340 Sum_probs=100.2
Q ss_pred CCCccceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCC
Q 007758 36 GEPWLDAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKES 115 (590)
Q Consensus 36 ~~~~sDv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~ 115 (590)
...+|||+|.|+|+.|+|||+|||||||||++||.+...+ ... ..+.+.++.++.|..+|+|+|+|++...
T Consensus 171 ~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e----~~~-----~~i~l~~~~~~~f~~~L~~iYt~~~~~~ 241 (312)
T 3hqi_A 171 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEE----SKK-----NRVEINDVEPEVFKEMMCFIYTGKAPNL 241 (312)
T ss_dssp TTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC---------CC-----SEEEECSSCHHHHHHHHHHHHHSCCTTH
T ss_pred CCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccc----cCC-----ceEEecCCCHHHHHHHHHhhcCCCCCCh
Confidence 3679999999999999999999999999999999986433 221 1255567889999999999999876431
Q ss_pred CCCccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeecccccccccccCCCCCCchHHHHHHHcCcHHHHhcccc
Q 007758 116 PPEVSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLLLILAENAPVEDVIPILVAALHCQLNRLHSCCIQ 195 (590)
Q Consensus 116 p~~vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~din~~~~~~~~~t~Lh~A~~~g~~~Ll~~g~d 195 (590)
. +.+.++|.+|..++++.+...+.+....-. ...+....|.+|..++...|.+.+.+
T Consensus 242 ~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~l~~A~~~~~~~L~~~~~~ 298 (312)
T 3hqi_A 242 D--------------------KMADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILILADLHSADQLKTQAVD 298 (312)
T ss_dssp H--------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTC---CTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred H--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccC---CHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 1 346789999999999998887766654321 22345788999999999888888776
Q ss_pred ccc
Q 007758 196 RIA 198 (590)
Q Consensus 196 i~~ 198 (590)
...
T Consensus 299 ~i~ 301 (312)
T 3hqi_A 299 FIN 301 (312)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=97.87 E-value=1.1e-05 Score=73.98 Aligned_cols=113 Identities=20% Similarity=0.220 Sum_probs=70.2
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhcc-CCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCc
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNL-RNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEV 119 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~-~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~v 119 (590)
|+++. +|+.|++||.| |+.|+||++||.+ +... +.. ...+|+..|....+..++.|.|+++-.+.+...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~---e~~-----~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~ 73 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDD---EGD-----DDPVPLPNVNAAILKKVIQWCTHHKDDPPPPED 73 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS--------------CEECTTSCHHHHHHHHHHHHHTTTCCC----
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcc---ccc-----CCCcCCCCccHHHHHHHHHHHHHcCcCCCCccc
Confidence 56654 69999999999 8999999999987 3110 111 123888899999999999999998865433221
Q ss_pred ccc----cccccccc--CCCchhhhhhHHHHHHHhcCCceeeeecccccc
Q 007758 120 SAC----VDDACVHV--SCPPTINYAVELIYACAAFQITELVSYFQCLLL 163 (590)
Q Consensus 120 s~c----~d~~c~h~--~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~ 163 (590)
..+ .+.....+ ...--.+.+.+++.+|.++++..++.++-+..+
T Consensus 74 ~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va 123 (159)
T 2ast_A 74 DENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVA 123 (159)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 000 00000000 001112345689999999998887766554443
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.79 E-value=6.6e-05 Score=62.72 Aligned_cols=59 Identities=14% Similarity=0.273 Sum_probs=44.1
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHH
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLY 108 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLY 108 (590)
|+++- +|+.|++||.| |+.|++|++||.+... ..++ -...+|+..|....+..+++|.|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~--~~E~-----~~~~I~l~~V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAEN-----ETNEVNFREIPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------------CEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCC--cccc-----CCCceECCCCCHHHHHHHHHHHH
Confidence 34444 58999999999 9999999999986421 1111 12348888999999999999999
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=96.81 E-value=0.00096 Score=59.61 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=69.4
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCcc
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs 120 (590)
|++.. +|+.|.+||.+ |..|++|+.||.... ...+|+..|....+..+++|.|..+-.+.+....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-------------MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-------------CSSEECTTCCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-------------CCceecCCcCHHHHHHHHHHHHHhccCCCccccc
Confidence 55565 58999999998 899999999998641 1138888999999999999999977544322110
Q ss_pred ccc----cccccc--cCCCchhhhhhHHHHHHHhcCCceeeeeccccccc
Q 007758 121 ACV----DDACVH--VSCPPTINYAVELIYACAAFQITELVSYFQCLLLI 164 (590)
Q Consensus 121 ~c~----d~~c~h--~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g~d 164 (590)
.+. +..... ....--.+...+++.+|.++++..++.+.-+..++
T Consensus 70 ~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~ 119 (141)
T 1fs1_B 70 ENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVAN 119 (141)
T ss_dssp -----------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 000 000000 00011123455889999999988877666555444
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=95.63 E-value=0.00077 Score=61.59 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=27.3
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCC
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKE 114 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~ 114 (590)
|++.. +|..|.+||.+ |..|++|+.||.+... .+.+|+..|....+..++.|.|+.+..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~------------~~~Ipl~~V~~~iL~kVieyc~~h~~~~ 66 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV------------DNGVPLPNVTSKILAKVIEYCKRHVEAA 66 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CCTTSCHHHHHHHHHC--------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC------------CCceeCCcCcHHHHHHHHHHHHHcccCC
Confidence 44554 58999999998 8899999999986421 1137888999999999999999977543
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=94.19 E-value=0.058 Score=45.44 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=62.9
Q ss_pred eEEEECCeEeeeeeehhcccC-HHHHHhhccCCCCCC-CCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCc
Q 007758 42 AEIVVEGKSVVVNRSILSERS-QFFHRLFNLRNDGSV-SEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEV 119 (590)
Q Consensus 42 v~i~v~g~~v~aHr~iLaarS-~~Fr~lf~~~~~~~~-~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~v 119 (590)
|+|.|+|+.|...+..|.... .+|..||.+...-.. ...... -.-+-....|..+|.|+.+|++..++ .+
T Consensus 8 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~-------~fiDRdp~~F~~IL~~lr~g~l~~p~-~~ 79 (107)
T 3drz_A 8 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGA-------YLIDRDPTYFGPVLNYLRHGKLVINK-DL 79 (107)
T ss_dssp EEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSC-------EEECSCHHHHHHHHHHHHHSCCCCCT-TS
T ss_pred EEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCce-------EEecCChHHHHHHHHHhCCCeeCCCC-CC
Confidence 689999999999999998654 478888875411000 000011 12256778999999999999876432 21
Q ss_pred cccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccc
Q 007758 120 SACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 120 s~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
| ...++.-|..|++.++++.|.+
T Consensus 80 -------~-----------~~~l~~Ea~fy~l~~L~~~l~~ 102 (107)
T 3drz_A 80 -------A-----------EEGVLEEAEFYNITSLIKLVKD 102 (107)
T ss_dssp -------C-----------HHHHHHHHHHHTCHHHHHHHHH
T ss_pred -------C-----------HHHHHHHHHHCCCHHHHHHHHH
Confidence 2 2346778888999888877643
No 140
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=93.45 E-value=0.15 Score=42.27 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=46.1
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhC
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTG 110 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG 110 (590)
|++.- +|..|.++|.+ |..|..++.||..+. + .. ..-+|+..|....+..+++|.+.-
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e----~~-----~~~Iplp~V~~~iL~kVieyc~~h 64 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-R----ES-----KGRIELKQFDSHILEKAVEYLNYN 64 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-T----TC-----TTEEEETTSCHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-c----cC-----CCceecCCcCHHHHHHHHHHHHHh
Confidence 55555 69999999997 889999999998732 1 11 123888899999999999999883
No 141
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=93.09 E-value=0.12 Score=42.50 Aligned_cols=61 Identities=13% Similarity=0.269 Sum_probs=44.8
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhC
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTG 110 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG 110 (590)
|+++- +|..|.++|.+ |..|++++.||..... ..+.. ..-+|+..|....+..+++|.+.-
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~--~~e~~-----~~~Ipl~~V~~~iL~kVieyc~~h 64 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAENE-----TNEVNFREIPSHVLSKVCMYFTYK 64 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCC--ccccc-----CCceeCCCCCHHHHHHHHHHHHHc
Confidence 44555 59999999997 8899999999986321 01111 124899899999999999999873
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=86.10 E-value=1.1 Score=40.91 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=62.8
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCcc
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs 120 (590)
|+++- +|..|.++|.+ |..|..++.|+.........+. -...+|+..|....+..|+.|.+.-+-.+.|....
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~-----~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~ 82 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDD-----DEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDD 82 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC---
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCccccccc-----CCCceeeCCCCHHHHHHHHHHHHHcccCCCccccc
Confidence 44444 48999999998 7799999999975421100000 01348888999999999999999966544332100
Q ss_pred ccccccccccCCCch---------hhhhhHHHHHHHhcCCceeeeeccc
Q 007758 121 ACVDDACVHVSCPPT---------INYAVELIYACAAFQITELVSYFQC 160 (590)
Q Consensus 121 ~c~d~~c~h~~c~~~---------i~~~lelL~~A~~~~~~elv~~Ll~ 160 (590)
+.. ......+. ....++++.+|.++++..|+.+.-+
T Consensus 83 ---~~~-~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~ 127 (169)
T 3v7d_A 83 ---DDS-RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCK 127 (169)
T ss_dssp ---------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---ccc-cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 000 00001111 1334577777777776666554433
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=82.20 E-value=2.1 Score=40.04 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=63.5
Q ss_pred ceEEEECCeEeeeeeehhcccC-HHHHHhhccCCCCC-CCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCC
Q 007758 41 DAEIVVEGKSVVVNRSILSERS-QFFHRLFNLRNDGS-VSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPE 118 (590)
Q Consensus 41 Dv~i~v~g~~v~aHr~iLaarS-~~Fr~lf~~~~~~~-~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~ 118 (590)
=|+|.|+|+.|..-+-.|.... .+|..||.+...-. ....... -+.+-....|..+|.|+-+|++..++ .
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~ge-------yFIDRDP~~F~~ILnyLRtG~L~lP~-~ 84 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGA-------YLIDRDPTYFGPVLNYLRHGKLVINK-D 84 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCC-------EEECSCSTTHHHHHHHHHHSCCCCCT-T
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCcc-------EEecCChHHHHHHHHHhcCCccCCCC-C
Confidence 3689999999999999997543 37888887542110 0001111 12245667999999999999986433 2
Q ss_pred ccccccccccccCCCchhhhhhHHHHHHHhcCCceeeeeccccc
Q 007758 119 VSACVDDACVHVSCPPTINYAVELIYACAAFQITELVSYFQCLL 162 (590)
Q Consensus 119 vs~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv~~Ll~~g 162 (590)
+ | ...++.-|..|++.++++.+..+.
T Consensus 85 ~-------~-----------~~~l~eEA~FygL~~Lv~~l~~~i 110 (202)
T 3drx_A 85 L-------A-----------EEGVLEEAEFYNITSLIKLVKDKI 110 (202)
T ss_dssp S-------C-----------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred C-------C-----------HHHHHHHHHHCCcHHHHHHHHHHH
Confidence 1 2 124677888899998888776554
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=78.04 E-value=2.8 Score=35.27 Aligned_cols=61 Identities=13% Similarity=0.269 Sum_probs=44.2
Q ss_pred eEEEE-CCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhC
Q 007758 42 AEIVV-EGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTG 110 (590)
Q Consensus 42 v~i~v-~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG 110 (590)
|+++- +|..|.+.|.+ |..|..++.|+..... ..+.. ...+|+..|.-..+..+++|.+.-
T Consensus 19 v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~--~~e~~-----~~~IplpnV~s~iL~kVieyc~~h 80 (112)
T 1vcb_B 19 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQ--FAENE-----TNEVNFREIPSHVLSKVCMYFTYK 80 (112)
T ss_dssp EEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCC--ccccc-----CCceeCCCCCHHHHHHHHHHHHHh
Confidence 55553 58999999995 6899999999985321 01111 124899899999999999999873
No 145
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=61.56 E-value=16 Score=30.64 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=51.8
Q ss_pred eEEEECCeEeeeeeehhcccCH-HHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCcc
Q 007758 42 AEIVVEGKSVVVNRSILSERSQ-FFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (590)
Q Consensus 42 v~i~v~g~~v~aHr~iLaarS~-~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs 120 (590)
|+|.|+|+.|..-+..|..... ++..||..... .+..... -..+-....|..+|.|+-+|++..++ .+
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~--~~~~~g~-------~FiDRdp~~F~~ILnylR~G~l~~p~-~~- 75 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLN--YDPVLNE-------YFFDRHPGVFAQIINYYRSGKLHYPT-DV- 75 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTT--EETTTTE-------EEECSCTTTHHHHHHHHHHSCBCCCS-SS-
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCC--CCCCCCc-------EEEecChHHHHHHHHHhcCCCCCCCC-cc-
Confidence 7899999999999999964322 23344432110 0000011 12245667999999999999886543 21
Q ss_pred ccccccccccCCCchhhhhhHHHHHHHhcCCcee
Q 007758 121 ACVDDACVHVSCPPTINYAVELIYACAAFQITEL 154 (590)
Q Consensus 121 ~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~el 154 (590)
| ...++.-|..|++.+.
T Consensus 76 ------~-----------~~~~~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 76 ------C-----------GPLFEEELEFWGLDSN 92 (115)
T ss_dssp ------C-----------HHHHHHHHHHHTCCGG
T ss_pred ------c-----------HHHHHHHHHHhCCChH
Confidence 1 2245677778887664
No 146
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=43.38 E-value=31 Score=28.09 Aligned_cols=65 Identities=14% Similarity=0.077 Sum_probs=37.7
Q ss_pred eEEEECCeEeeeeeehhcccCH-HHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHh-CCCCCC
Q 007758 42 AEIVVEGKSVVVNRSILSERSQ-FFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYT-GMTKES 115 (590)
Q Consensus 42 v~i~v~g~~v~aHr~iLaarS~-~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYt-G~l~~~ 115 (590)
|+|.|+|+.|...+..|..--. .+-.|+... ..+.-+.=--..+-....|..+|.|+-+ |++..+
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~---------~~~~~~~~eyFiDRdp~~F~~ILnflR~~G~l~~p 69 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRN---------RYYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRP 69 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHG---------GGEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCC
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccc---------cccCCCceeEEEcCChHHHHHHHHHHhcCCcccCC
Confidence 6899999999999999953211 111222110 0000000001124566799999999999 888543
No 147
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=43.34 E-value=45 Score=27.33 Aligned_cols=86 Identities=15% Similarity=0.079 Sum_probs=50.8
Q ss_pred eEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCccc
Q 007758 42 AEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVSA 121 (590)
Q Consensus 42 v~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs~ 121 (590)
|++.|+|+.|..-+..|..... .||... . ....+.-..=.-.-+-....|..+|.|+-+|++..++ .+
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~----~--~~~~~~~~~~~~FiDRdp~~F~~ILnflR~g~l~~p~-~~-- 69 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSS----E--RDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPR-HE-- 69 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSG----G--GGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCT-TS--
T ss_pred EEEEECCEEEEEeHHHHhcCCC---cccccc----C--CcccccCCCCcEEEeCCcHHHHHHHHHHhcCCCCCCC-Cc--
Confidence 6899999999999999963221 233321 0 0000000000111245667999999999999875432 21
Q ss_pred cccccccccCCCchhhhhhHHHHHHHhcCCceee
Q 007758 122 CVDDACVHVSCPPTINYAVELIYACAAFQITELV 155 (590)
Q Consensus 122 c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv 155 (590)
| ...++.-|..|++..++
T Consensus 70 -----~-----------~~~l~~Ea~fy~i~~l~ 87 (105)
T 1nn7_A 70 -----C-----------ISAYDEELAFFGLIPEI 87 (105)
T ss_dssp -----C-----------HHHHHHHHHHHTCCSCC
T ss_pred -----C-----------HHHHHHHHHHcCCCHHH
Confidence 1 23467777888887653
No 148
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=41.89 E-value=45 Score=28.29 Aligned_cols=86 Identities=17% Similarity=0.099 Sum_probs=51.5
Q ss_pred eEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCccc
Q 007758 42 AEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVSA 121 (590)
Q Consensus 42 v~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs~ 121 (590)
|+|.|+|+.|..-+..|...- ..||... .+. ..+.-..=.-+.+-....|..+|.|+-+|++.. |..+
T Consensus 15 V~LNVGG~~F~t~~~TL~~~p---~S~L~~~----~~~--~~~~~~~g~~FiDRdp~~F~~ILnflR~G~l~~-p~~~-- 82 (124)
T 1s1g_A 15 IVLNVSGRRFQTWRTTLERYP---DTLLGST----EKE--FFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHY-PRYE-- 82 (124)
T ss_dssp EEEEETTEEEEEEHHHHTTST---TSSTTSS----GGG--GTBCSSSCSEEECSCHHHHHHHHHHHHHSCBCC-CTTS--
T ss_pred EEEEeCCEEEEEeHHHHhcCC---Cceeccc----CCc--ccccCCCCcEEEcCChHHHHHHHHHHhcCCCCC-CCCc--
Confidence 789999999999999996322 1233321 000 000000001112456779999999999998864 3331
Q ss_pred cccccccccCCCchhhhhhHHHHHHHhcCCceee
Q 007758 122 CVDDACVHVSCPPTINYAVELIYACAAFQITELV 155 (590)
Q Consensus 122 c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv 155 (590)
| ...++.-|..|++..++
T Consensus 83 -----~-----------~~~l~~Ea~fy~i~~l~ 100 (124)
T 1s1g_A 83 -----C-----------ISAYDDELAFYGILPEI 100 (124)
T ss_dssp -----C-----------HHHHHHHHHHTTCCGGG
T ss_pred -----C-----------HHHHHHHHHHcCCChHH
Confidence 2 23467778888887653
No 149
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=33.91 E-value=65 Score=27.92 Aligned_cols=87 Identities=16% Similarity=0.055 Sum_probs=51.8
Q ss_pred ceEEEECCeEeeeeeehhcccCHHHHHhhccCCCCCCCCCCcccccccceeccccchhHHHHHHHHHHhCCCCCCCCCcc
Q 007758 41 DAEIVVEGKSVVVNRSILSERSQFFHRLFNLRNDGSVSEGKPKYLLTDLVPHGKVGFEAFNDILLYLYTGMTKESPPEVS 120 (590)
Q Consensus 41 Dv~i~v~g~~v~aHr~iLaarS~~Fr~lf~~~~~~~~~~~~~~~~l~~li~~~~v~~e~l~~vL~yLYtG~l~~~p~~vs 120 (590)
=|+|.|+|+.|..-+..|...- ..||... .+. .-+.-..=.-+.+-....|..+|.|+-+|++..+ .++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~----~~~--~~~~~~~g~yFiDRdp~~F~~ILnflR~G~l~~p-~~~- 104 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGST----EKE--FFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYP-RYE- 104 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSG----GGG--GSEETTTTEEEECSCHHHHHHHHHHHHHSSBCCC-TTS-
T ss_pred EEEEEECCEEEEeeHHHHhcCC---Ceeeccc----CCc--ccccCCCCeEEEeCCcHHHHHHHHHHhcCCcCCC-CCc-
Confidence 4789999999999999996321 2233321 000 0000000011124567799999999999987643 221
Q ss_pred ccccccccccCCCchhhhhhHHHHHHHhcCCceee
Q 007758 121 ACVDDACVHVSCPPTINYAVELIYACAAFQITELV 155 (590)
Q Consensus 121 ~c~d~~c~h~~c~~~i~~~lelL~~A~~~~~~elv 155 (590)
| ...++.-|..|++..++
T Consensus 105 ------~-----------~~~l~eEa~fy~i~~l~ 122 (140)
T 2nz0_B 105 ------C-----------ISAYDDELAFYGILPEI 122 (140)
T ss_dssp ------C-----------HHHHHHHHHHHTCCGGG
T ss_pred ------C-----------HHHHHHHHHHcCCChHH
Confidence 1 23457777888887653
No 150
>4a1q_A ORF E73; viral protein, extremophIle, archaea, ribbon-helix-helix Pro DNA-binding proteins; NMR {Sulfolobus virus ragged hills} PDB: 4aai_A
Probab=33.79 E-value=9.2 Score=27.61 Aligned_cols=12 Identities=33% Similarity=0.587 Sum_probs=9.6
Q ss_pred HHhhhccccCCC
Q 007758 473 KTVETAHLYFPH 484 (590)
Q Consensus 473 ~~ve~g~~~fp~ 484 (590)
|+-|.|+||||.
T Consensus 61 ki~ei~krffpa 72 (73)
T 4a1q_A 61 KIDEISKRFFPA 72 (73)
T ss_dssp HHHHHHHHHSCC
T ss_pred cHHHHHHhccCC
Confidence 456889999995
No 151
>1etf_B REV peptide; complex (RNA/peptide), export regulator, mRNA splicing, transcription regulation, viral protein/RNA complex; NMR {Human immunodeficiency virus 1} SCOP: j.9.2.1 PDB: 1etg_B
Probab=24.75 E-value=75 Score=19.14 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=17.7
Q ss_pred CChHHHHHHHhhhhhhHHHHHH
Q 007758 521 VSPEERKLERAGFMKLRVDIHE 542 (590)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~ 542 (590)
+|...++-+|+||++.+..|..
T Consensus 1 GTrqaRRnRRRRWR~Rq~qi~~ 22 (26)
T 1etf_B 1 DTRQARRNRRRRWRERQRAAAA 22 (26)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhhhhHHHHHHHHHHHHHH
Confidence 3566788899999999997754
Done!