Query 007762
Match_columns 590
No_of_seqs 362 out of 3712
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 14:59:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007762.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007762hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.4E-57 9.5E-62 510.8 36.4 529 2-573 77-611 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.2E-53 2.6E-58 482.8 33.8 490 1-534 100-590 (968)
3 KOG4194 Membrane glycoprotein 100.0 2.6E-38 5.6E-43 304.5 3.9 387 48-499 54-447 (873)
4 KOG4194 Membrane glycoprotein 100.0 1.3E-37 2.9E-42 299.6 5.5 360 177-542 80-443 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 2.3E-38 5E-43 291.9 -13.5 455 44-528 66-541 (565)
6 KOG0618 Serine/threonine phosp 100.0 1.8E-34 3.9E-39 292.6 -6.9 475 8-526 11-487 (1081)
7 KOG0472 Leucine-rich repeat pr 100.0 4.1E-35 8.8E-40 270.5 -14.8 451 46-551 45-540 (565)
8 KOG0618 Serine/threonine phosp 100.0 1.6E-32 3.5E-37 278.5 -4.4 469 13-525 39-510 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 3.4E-32 7.4E-37 264.4 -3.2 370 47-531 8-378 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 8.6E-32 1.9E-36 261.6 -4.6 348 190-549 22-372 (1255)
11 PLN03210 Resistant to P. syrin 99.9 1.4E-22 3E-27 229.9 26.1 346 141-526 551-904 (1153)
12 PLN03210 Resistant to P. syrin 99.9 6.6E-22 1.4E-26 224.4 28.7 343 64-453 548-904 (1153)
13 KOG4237 Extracellular matrix p 99.9 3.2E-24 6.9E-29 198.5 -3.6 277 9-311 81-359 (498)
14 PRK15387 E3 ubiquitin-protein 99.9 9.3E-21 2E-25 199.5 17.9 267 227-539 203-469 (788)
15 KOG4237 Extracellular matrix p 99.9 1.4E-23 2.9E-28 194.4 -4.3 311 255-570 52-383 (498)
16 PRK15387 E3 ubiquitin-protein 99.8 1.8E-19 3.8E-24 190.0 17.6 267 200-513 201-467 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 2.5E-19 5.5E-24 190.1 11.3 254 226-539 179-436 (754)
18 PRK15370 E3 ubiquitin-protein 99.7 1.6E-17 3.5E-22 176.5 12.1 203 200-432 178-380 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 1E-18 2.2E-23 172.9 -0.9 61 467-527 250-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 1.8E-18 3.9E-23 171.1 0.5 261 24-311 3-291 (319)
21 KOG0617 Ras suppressor protein 99.6 7.6E-18 1.6E-22 138.6 -4.2 166 345-539 31-196 (264)
22 KOG0617 Ras suppressor protein 99.5 3.3E-16 7.1E-21 129.0 -3.9 155 248-432 32-186 (264)
23 KOG0532 Leucine-rich repeat (L 99.1 2.4E-12 5.1E-17 126.0 -3.9 169 327-528 79-247 (722)
24 KOG1909 Ran GTPase-activating 99.1 2E-12 4.3E-17 119.4 -4.6 91 45-135 29-132 (382)
25 KOG0532 Leucine-rich repeat (L 99.1 1.9E-12 4.2E-17 126.6 -5.8 171 374-553 78-248 (722)
26 PF14580 LRR_9: Leucine-rich r 99.1 9.9E-11 2.2E-15 101.6 5.3 103 418-522 41-147 (175)
27 PLN03150 hypothetical protein; 99.1 1.5E-10 3.3E-15 123.1 7.6 94 443-537 419-512 (623)
28 KOG1909 Ran GTPase-activating 99.1 9E-12 2E-16 115.1 -1.6 139 369-527 155-310 (382)
29 PF14580 LRR_9: Leucine-rich r 99.1 8.2E-11 1.8E-15 102.1 3.3 137 6-156 8-148 (175)
30 KOG1259 Nischarin, modulator o 99.1 2.4E-11 5.1E-16 109.7 -0.2 199 322-529 213-413 (490)
31 KOG1259 Nischarin, modulator o 99.1 3.1E-11 6.8E-16 109.0 0.3 133 368-506 281-414 (490)
32 KOG3207 Beta-tubulin folding c 99.0 2.6E-11 5.6E-16 115.2 -0.3 112 44-158 119-232 (505)
33 COG4886 Leucine-rich repeat (L 99.0 1.9E-10 4.2E-15 117.0 6.1 194 302-505 97-291 (394)
34 COG4886 Leucine-rich repeat (L 99.0 5.3E-10 1.2E-14 113.8 8.2 152 274-432 116-268 (394)
35 KOG3207 Beta-tubulin folding c 99.0 6.1E-11 1.3E-15 112.7 -0.3 211 222-432 118-339 (505)
36 PLN03150 hypothetical protein; 98.9 2.4E-09 5.3E-14 114.0 9.1 112 397-532 420-532 (623)
37 PF13855 LRR_8: Leucine rich r 98.9 9.9E-10 2.2E-14 78.3 2.8 61 467-527 1-61 (61)
38 KOG4658 Apoptotic ATPase [Sign 98.9 1.2E-09 2.7E-14 118.7 4.2 289 200-498 523-826 (889)
39 PF13855 LRR_8: Leucine rich r 98.8 4.2E-09 9.1E-14 75.0 3.2 61 442-503 1-61 (61)
40 KOG0531 Protein phosphatase 1, 98.7 1.8E-09 3.8E-14 110.1 -0.5 226 294-533 91-323 (414)
41 KOG4658 Apoptotic ATPase [Sign 98.7 1.6E-08 3.5E-13 110.2 6.2 271 224-504 522-807 (889)
42 KOG2120 SCF ubiquitin ligase, 98.6 3.8E-10 8.2E-15 102.0 -7.0 182 75-259 186-373 (419)
43 KOG2120 SCF ubiquitin ligase, 98.6 1.1E-09 2.3E-14 99.2 -5.9 179 201-381 186-373 (419)
44 KOG0531 Protein phosphatase 1, 98.5 8.1E-09 1.8E-13 105.2 -1.8 245 223-507 70-321 (414)
45 KOG3665 ZYG-1-like serine/thre 98.3 8.3E-08 1.8E-12 102.0 -0.1 162 46-235 122-285 (699)
46 KOG4341 F-box protein containi 98.3 1.8E-08 3.9E-13 95.7 -6.1 286 19-334 138-437 (483)
47 KOG4341 F-box protein containi 98.3 1.6E-08 3.5E-13 96.0 -6.6 233 198-430 188-437 (483)
48 KOG2982 Uncharacterized conser 98.3 1.3E-07 2.8E-12 85.9 -0.8 205 73-304 70-285 (418)
49 KOG1859 Leucine-rich repeat pr 98.2 2E-08 4.4E-13 101.7 -6.9 159 340-504 102-292 (1096)
50 KOG2982 Uncharacterized conser 98.2 7.5E-07 1.6E-11 81.1 2.1 83 441-523 198-287 (418)
51 COG5238 RNA1 Ran GTPase-activa 98.2 2.4E-07 5.2E-12 83.1 -1.1 163 196-360 26-227 (388)
52 COG5238 RNA1 Ran GTPase-activa 98.2 2.7E-07 5.9E-12 82.8 -0.9 218 44-286 28-284 (388)
53 KOG1859 Leucine-rich repeat pr 98.1 5.9E-08 1.3E-12 98.4 -6.6 128 20-162 165-293 (1096)
54 PF13306 LRR_5: Leucine rich r 98.1 9.9E-06 2.1E-10 67.9 7.3 128 9-151 2-129 (129)
55 PF12799 LRR_4: Leucine Rich r 98.1 3.5E-06 7.7E-11 54.6 2.8 36 492-528 2-37 (44)
56 PF12799 LRR_4: Leucine Rich r 97.9 1E-05 2.2E-10 52.5 3.3 37 467-504 1-37 (44)
57 KOG4579 Leucine-rich repeat (L 97.9 4.9E-07 1.1E-11 72.6 -4.2 85 444-532 55-139 (177)
58 KOG1644 U2-associated snRNP A' 97.9 3E-05 6.6E-10 67.0 6.3 130 20-159 20-151 (233)
59 KOG4579 Leucine-rich repeat (L 97.8 1.6E-06 3.5E-11 69.7 -2.0 112 201-317 28-141 (177)
60 PRK15386 type III secretion pr 97.8 7.4E-05 1.6E-09 73.5 8.6 136 367-526 48-188 (426)
61 PRK15386 type III secretion pr 97.8 0.0001 2.2E-09 72.5 9.0 54 322-381 51-104 (426)
62 KOG1644 U2-associated snRNP A' 97.7 7.4E-05 1.6E-09 64.6 5.3 132 48-213 21-153 (233)
63 KOG3665 ZYG-1-like serine/thre 97.5 4.1E-05 8.8E-10 81.9 2.3 128 198-328 146-280 (699)
64 PF13306 LRR_5: Leucine rich r 97.5 0.00036 7.8E-09 58.4 7.3 122 293-421 7-128 (129)
65 KOG2123 Uncharacterized conser 97.3 6.3E-06 1.4E-10 74.5 -6.4 80 76-160 21-100 (388)
66 KOG1947 Leucine rich repeat pr 97.2 4.8E-05 1E-09 79.9 -2.2 63 72-134 241-306 (482)
67 KOG1947 Leucine rich repeat pr 97.1 4.4E-05 9.5E-10 80.2 -2.7 14 490-503 426-439 (482)
68 KOG2739 Leucine-rich acidic nu 97.0 0.00026 5.6E-09 64.1 1.4 86 44-136 41-129 (260)
69 KOG2739 Leucine-rich acidic nu 97.0 0.00028 6.1E-09 63.9 1.2 72 463-535 87-162 (260)
70 KOG2123 Uncharacterized conser 96.7 5.9E-05 1.3E-09 68.4 -5.6 99 419-521 19-123 (388)
71 PF00560 LRR_1: Leucine Rich R 95.7 0.004 8.6E-08 33.4 0.7 19 517-536 2-20 (22)
72 PF00560 LRR_1: Leucine Rich R 95.5 0.0054 1.2E-07 32.9 0.7 19 493-512 2-20 (22)
73 KOG4308 LRR-containing protein 92.7 0.00051 1.1E-08 70.3 -13.0 39 249-287 262-303 (478)
74 PF13504 LRR_7: Leucine rich r 92.6 0.073 1.6E-06 26.4 1.2 13 516-528 2-14 (17)
75 KOG3864 Uncharacterized conser 92.0 0.03 6.4E-07 49.0 -1.1 81 20-106 102-184 (221)
76 smart00369 LRR_TYP Leucine-ric 90.0 0.27 5.8E-06 27.5 1.9 16 515-530 2-17 (26)
77 smart00370 LRR Leucine-rich re 90.0 0.27 5.8E-06 27.5 1.9 16 515-530 2-17 (26)
78 KOG4308 LRR-containing protein 89.6 0.0031 6.7E-08 64.7 -10.9 193 20-239 88-304 (478)
79 KOG0473 Leucine-rich repeat pr 88.6 0.017 3.7E-07 51.5 -5.5 82 443-528 43-124 (326)
80 KOG0473 Leucine-rich repeat pr 87.9 0.014 3.1E-07 52.0 -6.4 84 44-135 40-123 (326)
81 smart00369 LRR_TYP Leucine-ric 87.1 0.56 1.2E-05 26.1 2.0 14 491-504 2-15 (26)
82 smart00370 LRR Leucine-rich re 87.1 0.56 1.2E-05 26.1 2.0 14 491-504 2-15 (26)
83 PF13516 LRR_6: Leucine Rich r 85.8 0.13 2.9E-06 28.1 -1.0 13 492-504 3-15 (24)
84 KOG3864 Uncharacterized conser 85.5 0.12 2.6E-06 45.4 -2.0 35 124-159 102-136 (221)
85 smart00364 LRR_BAC Leucine-ric 73.3 2.5 5.4E-05 23.6 1.4 19 515-534 2-20 (26)
86 smart00365 LRR_SD22 Leucine-ri 70.5 3.7 8E-05 23.0 1.7 14 491-504 2-15 (26)
87 KOG4242 Predicted myosin-I-bin 70.5 22 0.00047 36.1 8.0 16 247-262 438-453 (553)
88 KOG4242 Predicted myosin-I-bin 66.5 37 0.00081 34.5 8.7 69 198-269 163-234 (553)
89 smart00368 LRR_RI Leucine rich 60.1 6.8 0.00015 22.2 1.5 20 200-219 2-21 (28)
90 smart00367 LRR_CC Leucine-rich 54.2 9.6 0.00021 21.1 1.5 11 19-29 2-12 (26)
91 KOG3763 mRNA export factor TAP 48.8 7.1 0.00015 40.1 0.6 39 44-84 216-254 (585)
92 KOG3763 mRNA export factor TAP 47.9 9.3 0.0002 39.3 1.3 65 441-506 217-285 (585)
93 TIGR00864 PCC polycystin catio 24.8 44 0.00096 41.9 2.1 32 473-504 1-32 (2740)
94 TIGR00864 PCC polycystin catio 20.5 58 0.0013 41.0 1.9 32 448-480 1-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.4e-57 Score=510.76 Aligned_cols=529 Identities=30% Similarity=0.417 Sum_probs=321.3
Q ss_pred CCCccccccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEe
Q 007762 2 SSYEVNGVLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYI 81 (590)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L 81 (590)
++|++.|.+| .+|..+++|++|++++| .+.+.+|..++..+++|++|++++|.+++ .++. ..+++|++|+|
T Consensus 77 ~~~~i~~~~~-~~~~~l~~L~~L~Ls~n--~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~---~~p~---~~l~~L~~L~L 147 (968)
T PLN00113 77 SGKNISGKIS-SAIFRLPYIQTINLSNN--QLSGPIPDDIFTTSSSLRYLNLSNNNFTG---SIPR---GSIPNLETLDL 147 (968)
T ss_pred cCCCccccCC-hHHhCCCCCCEEECCCC--ccCCcCChHHhccCCCCCEEECcCCcccc---ccCc---cccCCCCEEEC
Confidence 3555566555 45666666666666666 44555565555456666666666666544 3332 33555666666
Q ss_pred ecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCccc
Q 007762 82 YNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEIN 161 (590)
Q Consensus 82 ~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~ 161 (590)
++|.+.+..|..++++++|++|++++|.+.+.+|. .+.++++|++|++++|.+.+..+ ..+..+++|+.|++++|.+
T Consensus 148 s~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l- 224 (968)
T PLN00113 148 SNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPN-SLTNLTSLEFLTLASNQLVGQIP-RELGQMKSLKWIYLGYNNL- 224 (968)
T ss_pred cCCcccccCChHHhcCCCCCEEECccCcccccCCh-hhhhCcCCCeeeccCCCCcCcCC-hHHcCcCCccEEECcCCcc-
Confidence 66666555566666666666666666665545554 45566666666666665554333 3455555666665555544
Q ss_pred ccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCC
Q 007762 162 AEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPF 241 (590)
Q Consensus 162 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 241 (590)
.+.+|..+..+++|++|++++|.+.+.+|..+ .++++|+.|++++|.+.+..
T Consensus 225 ---------------------------~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~ 276 (968)
T PLN00113 225 ---------------------------SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL-GNLKNLQYLFLYQNKLSGPI 276 (968)
T ss_pred ---------------------------CCcCChhHhcCCCCCEEECcCceeccccChhH-hCCCCCCEEECcCCeeeccC
Confidence 44455556666666666666666655555553 56666666666666666655
Q ss_pred cCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcC
Q 007762 242 RLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVG 321 (590)
Q Consensus 242 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~ 321 (590)
+..+..+++|+.|++++|.+.+.+|..+.. +++|+.|++++|.+++..|..+..+++|+.|++++|.+.+.+|..+. .
T Consensus 277 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~ 354 (968)
T PLN00113 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQ-LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG-K 354 (968)
T ss_pred chhHhhccCcCEEECcCCeeccCCChhHcC-CCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh-C
Confidence 555666666666666666666555555544 56666666666666666666666666666666666666655555443 3
Q ss_pred CCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEE
Q 007762 322 CVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIM 401 (590)
Q Consensus 322 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 401 (590)
+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..+..++.|+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 56666666666666665666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCC
Q 007762 402 MPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNG 481 (590)
Q Consensus 402 L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~ 481 (590)
+++|.+.+.++..+..+++|+.|++++|.+.+..|..+...+|+.|++++|.+.+.++.. +.++++|+.|++++|.+.+
T Consensus 435 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~ 513 (968)
T PLN00113 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRK-LGSLSELMQLKLSENKLSG 513 (968)
T ss_pred CcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChh-hhhhhccCEEECcCCccee
Confidence 666666666666566666666666666666666666555566666666666665555544 5566666666666666666
Q ss_pred CccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccccccCCccccc----cCCCCCCCccce-
Q 007762 482 SISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTTLHESY----SNSSSPNKQFEI- 556 (590)
Q Consensus 482 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~~~~----~~~~~~~~~~~~- 556 (590)
.+|..+..+++|++|++++|++++.+|..+..+++|+.|++++|++++.+|..+..++.+... |...+.+|....
T Consensus 514 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~ 593 (968)
T PLN00113 514 EIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAF 593 (968)
T ss_pred eCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchh
Confidence 666666666666666666666666666666666666666666666666666666555433322 333332332211
Q ss_pred -eccccCCCCCCCCCccc
Q 007762 557 -FFFIQGPQGHPRLATLV 573 (590)
Q Consensus 557 -~~~~~~~~~np~~~~~~ 573 (590)
.+...++.|||.+|+..
T Consensus 594 ~~~~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 594 LAINASAVAGNIDLCGGD 611 (968)
T ss_pred cccChhhhcCCccccCCc
Confidence 12345678999999754
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-53 Score=482.83 Aligned_cols=490 Identities=31% Similarity=0.449 Sum_probs=432.7
Q ss_pred CCCCccccccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEE
Q 007762 1 MSSYEVNGVLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELY 80 (590)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~ 80 (590)
+++|++.|.+|.+.|.++++|++|++++| .+.+.+|.. .+++|++|+|++|.+.+ .++ ..+.++++|++|+
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n--~l~~~~p~~---~l~~L~~L~Ls~n~~~~---~~p-~~~~~l~~L~~L~ 170 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNN--NFTGSIPRG---SIPNLETLDLSNNMLSG---EIP-NDIGSFSSLKVLD 170 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCC--ccccccCcc---ccCCCCEEECcCCcccc---cCC-hHHhcCCCCCEEE
Confidence 46899999999888889999999999999 667777753 67899999999999876 444 6899999999999
Q ss_pred eecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCcc
Q 007762 81 IYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEI 160 (590)
Q Consensus 81 L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~ 160 (590)
+++|.+.+.+|..+.++++|++|++++|.+.+.+|. .+.++++|++|++++|.+.+.++ ..+.++++|+.|++++|.+
T Consensus 171 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l 248 (968)
T PLN00113 171 LGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPR-ELGQMKSLKWIYLGYNNLSGEIP-YEIGGLTSLNHLDLVYNNL 248 (968)
T ss_pred CccCcccccCChhhhhCcCCCeeeccCCCCcCcCCh-HHcCcCCccEEECcCCccCCcCC-hhHhcCCCCCEEECcCcee
Confidence 999999989999999999999999999999877777 78999999999999999886555 5678888888888877754
Q ss_pred cccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCC
Q 007762 161 NAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGP 240 (590)
Q Consensus 161 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 240 (590)
. +.+|..+..+++|++|++++|.+.+.+|..+ .++++|+.|++++|.+.+.
T Consensus 249 ~----------------------------~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~n~l~~~ 299 (968)
T PLN00113 249 T----------------------------GPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI-FSLQKLISLDLSDNSLSGE 299 (968)
T ss_pred c----------------------------cccChhHhCCCCCCEEECcCCeeeccCchhH-hhccCcCEEECcCCeeccC
Confidence 3 3466778888899999999999887888775 6889999999999998888
Q ss_pred CcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhc
Q 007762 241 FRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAV 320 (590)
Q Consensus 241 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 320 (590)
.+..+..+++|+.|++++|.+.+..|..+.. +++|+.|++++|.+.+.+|..++.+++|+.|++++|.+.+.+|..+.
T Consensus 300 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~- 377 (968)
T PLN00113 300 IPELVIQLQNLEILHLFSNNFTGKIPVALTS-LPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC- 377 (968)
T ss_pred CChhHcCCCCCcEEECCCCccCCcCChhHhc-CCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh-
Confidence 8888888999999999999988888877765 88999999999999888888899999999999999999878887765
Q ss_pred CCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEE
Q 007762 321 GCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHI 400 (590)
Q Consensus 321 ~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 400 (590)
.+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..++.|+.|++++|.+.+.++..+..+++|+.|
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 457 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQML 457 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEE
Confidence 47889999999999988888888889999999999999988888888999999999999999998888888889999999
Q ss_pred ECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCC-CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcC
Q 007762 401 MMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRL 479 (590)
Q Consensus 401 ~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l 479 (590)
++++|.+.+.+|..+ ..++|+.|++++|.+++..|..+. +++|+.|++++|.+.+.+|.. +..+++|+.|++++|.+
T Consensus 458 ~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 458 SLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDE-LSSCKKLVSLDLSHNQL 535 (968)
T ss_pred ECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChH-HcCccCCCEEECCCCcc
Confidence 999999888777765 458899999999999888876654 778999999999998888876 88899999999999999
Q ss_pred CCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccc
Q 007762 480 NGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPC 534 (590)
Q Consensus 480 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~ 534 (590)
++.+|..+..+++|++|++++|++++.+|..+..+++|+.|++++|++.+.+|..
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 590 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST 590 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc
Confidence 9999999999999999999999999999999999999999999999999999965
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=304.50 Aligned_cols=387 Identities=23% Similarity=0.258 Sum_probs=286.3
Q ss_pred CcEEecCCCCCCCCCCCCCcccccCCCC--CcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCC-CC
Q 007762 48 LKYLSLSDSTLGTNSSKILDRGLCSLVH--LQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHL-TS 124 (590)
Q Consensus 48 L~~L~L~~~~~~~~~~~~~~~~l~~l~~--L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l-~~ 124 (590)
-+.|+.++..+.. +.-..+..+-- -+.|++++|++.+..+..|.++++|+++++..|.++ .||. +++. .+
T Consensus 54 ~~lldcs~~~lea----~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~--f~~~sgh 126 (873)
T KOG4194|consen 54 TRLLDCSDRELEA----IDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPR--FGHESGH 126 (873)
T ss_pred ceeeecCcccccc----ccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccc--ccccccc
Confidence 3456666666533 21122233222 344777777777777777777777777777777777 7776 4443 34
Q ss_pred CcEEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccE
Q 007762 125 IEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEY 204 (590)
Q Consensus 125 L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 204 (590)
|+.|++.+|.+. .+. .+.+..++.|+.
T Consensus 127 l~~L~L~~N~I~-sv~----------------------------------------------------se~L~~l~alrs 153 (873)
T KOG4194|consen 127 LEKLDLRHNLIS-SVT----------------------------------------------------SEELSALPALRS 153 (873)
T ss_pred eeEEeeeccccc-ccc----------------------------------------------------HHHHHhHhhhhh
Confidence 777777776654 222 233445567777
Q ss_pred EEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCc
Q 007762 205 VDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMN 284 (590)
Q Consensus 205 L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n 284 (590)
||+|.|.+. +++..-|..-.++++|++++|.|+......|..+.+|..|.++.|+++ .+|...++.+++|+.|+|..|
T Consensus 154 lDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN 231 (873)
T KOG4194|consen 154 LDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRN 231 (873)
T ss_pred hhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhcccc
Confidence 777777766 555544445567888888888888877778888889999999999998 888888877999999999999
Q ss_pred eecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCC
Q 007762 285 ALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIP 364 (590)
Q Consensus 285 ~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 364 (590)
.+.-.-.-.|+++++|+.|.+..|.+. .+.+..|..+.++++|++..|++......++.++++|+.|+++.|.+....+
T Consensus 232 ~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 232 RIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred ceeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 887444667889999999999999998 8888888889999999999999988777888889999999999999998888
Q ss_pred ccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCC----C
Q 007762 365 QSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCF----H 440 (590)
Q Consensus 365 ~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~----~ 440 (590)
..+..+++|++|++++|.++...+..|..+..|++|.|++|++...-...|..+++|+.||++.|.+...+.+.- .
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 889999999999999999998888889999999999999999987777788899999999999998875544321 1
Q ss_pred CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECc
Q 007762 441 PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILG 499 (590)
Q Consensus 441 ~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~ 499 (590)
+++|+.|++.||++ +.|+..+|.+++.|+.|||.+|.|..+.|+.|..+ .|++|.++
T Consensus 391 l~~LrkL~l~gNql-k~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQL-KSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred chhhhheeecCcee-eecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 44555555555555 35555555555555555555555555555555555 55555443
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=299.59 Aligned_cols=360 Identities=26% Similarity=0.298 Sum_probs=317.1
Q ss_pred cceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEc
Q 007762 177 LSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDI 256 (590)
Q Consensus 177 L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 256 (590)
-+.|++ +.+.+...-+..|.++++|+++.+..|.++ .+|... .-..+|+.|++.+|.|+......+..++.|++||+
T Consensus 80 t~~Ldl-snNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~-~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDL-SNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFG-HESGHLEKLDLRHNLISSVTSEELSALPALRSLDL 156 (873)
T ss_pred eeeeec-cccccccCcHHHHhcCCcceeeeeccchhh-hccccc-ccccceeEEeeeccccccccHHHHHhHhhhhhhhh
Confidence 334444 444455556678889999999999999997 888743 34456999999999999988888999999999999
Q ss_pred cCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCC
Q 007762 257 SNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLE 336 (590)
Q Consensus 257 ~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~ 336 (590)
+.|.++ +++...+..-.++++|+|++|.++..-...|..+.+|..|.++.|+++ .+|...|..+++|+.|++..|.|.
T Consensus 157 SrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~ir 234 (873)
T KOG4194|consen 157 SRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIR 234 (873)
T ss_pred hhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcchhhhhhcccccee
Confidence 999998 777665554579999999999999888888999999999999999999 999999988999999999999987
Q ss_pred CccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccC
Q 007762 337 GHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFC 416 (590)
Q Consensus 337 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~ 416 (590)
-.-...|.++++|+.|.+..|.+.......|-.+.++++|+++.|++...-..++.+++.|++|+|+.|.+..+-++++.
T Consensus 235 ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Ws 314 (873)
T KOG4194|consen 235 IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWS 314 (873)
T ss_pred eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhh
Confidence 55466788999999999999999988888999999999999999999988888999999999999999999988899999
Q ss_pred CCCCCcEEEcccCcCCCCCCCCCC-CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccc---cccccCC
Q 007762 417 QLDWLQILDISDNNISGSLPSCFH-PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISD---WVDGLSQ 492 (590)
Q Consensus 417 ~l~~L~~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~---~~~~l~~ 492 (590)
.+++|+.|++++|+++...++.+. +..|++|+|++|.+ ..+...+|..+.+|+.|||++|.+...+.+ .|.++++
T Consensus 315 ftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi-~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~ 393 (873)
T KOG4194|consen 315 FTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSI-DHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPS 393 (873)
T ss_pred hcccceeEeccccccccCChhHHHHHHHhhhhcccccch-HHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchh
Confidence 999999999999999988888776 67899999999999 578888899999999999999998865543 4788999
Q ss_pred CCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccccccCCccc
Q 007762 493 LSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTTLHE 542 (590)
Q Consensus 493 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~~ 542 (590)
|+.|.+.+|++.......|.+++.|+.|||.+|.|..+-|+.|..+.+.+
T Consensus 394 LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~ 443 (873)
T KOG4194|consen 394 LRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKE 443 (873)
T ss_pred hhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhh
Confidence 99999999999966567899999999999999999988899998875443
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.3e-38 Score=291.90 Aligned_cols=455 Identities=23% Similarity=0.336 Sum_probs=305.0
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCC
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLT 123 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~ 123 (590)
.+..|.+|+++.|++.. .| .+++.+..++.++.+.|++. ++|+.+..+.+|++++++.|.+. +++. .+..+-
T Consensus 66 nL~~l~vl~~~~n~l~~----lp-~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~-~i~~~~ 137 (565)
T KOG0472|consen 66 NLACLTVLNVHDNKLSQ----LP-AAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPD-SIGRLL 137 (565)
T ss_pred cccceeEEEeccchhhh----CC-HHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCc-hHHHHh
Confidence 44444555555544432 22 34444444444555555444 44444444445555555544444 3333 344444
Q ss_pred CCcEEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCccc
Q 007762 124 SIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLE 203 (590)
Q Consensus 124 ~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~ 203 (590)
.|+.++..+|++. ..+ ..+..+.++..+.+.+|++..-.... .....+++++. +.+.-+.+|..++.+.+|.
T Consensus 138 ~l~dl~~~~N~i~-slp-~~~~~~~~l~~l~~~~n~l~~l~~~~----i~m~~L~~ld~--~~N~L~tlP~~lg~l~~L~ 209 (565)
T KOG0472|consen 138 DLEDLDATNNQIS-SLP-EDMVNLSKLSKLDLEGNKLKALPENH----IAMKRLKHLDC--NSNLLETLPPELGGLESLE 209 (565)
T ss_pred hhhhhhccccccc-cCc-hHHHHHHHHHHhhccccchhhCCHHH----HHHHHHHhccc--chhhhhcCChhhcchhhhH
Confidence 4444444444443 111 22333444444444444332211111 00113334433 2333345788899999999
Q ss_pred EEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccC
Q 007762 204 YVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISM 283 (590)
Q Consensus 204 ~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~ 283 (590)
.|++..|++. .+|+ |.+|..|.+++++.|.+.-........++++..||+.+|+++ ++|..++- +.+|++||+++
T Consensus 210 ~LyL~~Nki~-~lPe--f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl-LrsL~rLDlSN 284 (565)
T KOG0472|consen 210 LLYLRRNKIR-FLPE--FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL-LRSLERLDLSN 284 (565)
T ss_pred HHHhhhcccc-cCCC--CCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHH-hhhhhhhcccC
Confidence 9999999987 7774 589999999999999887655555668899999999999998 89998876 78999999999
Q ss_pred ceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCC--CCcEEE-------ccCCc---C-CCc-cC---ccccCc
Q 007762 284 NALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCV--NLEYLA-------LSNNS---L-EGH-MF---SRNFNL 346 (590)
Q Consensus 284 n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~--~L~~L~-------l~~n~---i-~~~-~~---~~~~~l 346 (590)
|.++ .+|..++++ +|+.|-+.+|.+. ++-..+...-+ -|++|. ++... - ... .+ ......
T Consensus 285 N~is-~Lp~sLgnl-hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~ 361 (565)
T KOG0472|consen 285 NDIS-SLPYSLGNL-HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAI 361 (565)
T ss_pred Cccc-cCCcccccc-eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhh
Confidence 9999 788889999 9999999999876 55444332111 122221 11110 0 000 01 111234
Q ss_pred cccCceeccCccccccCCccccCCC---CCCEEEccCCcccccCccccCCCCCccE-EECCCCcCcCCCCcccCCCCCCc
Q 007762 347 TNLKWLQLEGNHFVGEIPQSLSKCF---VLEGLFLNNNSLSGMIPRWLGNLTRLQH-IMMPKNHLEGPIPVEFCQLDWLQ 422 (590)
Q Consensus 347 ~~L~~L~l~~~~~~~~~~~~l~~~~---~L~~L~l~~n~~~~~~~~~~~~l~~L~~-L~L~~n~~~~~~~~~~~~l~~L~ 422 (590)
.+.+.|++++-+++ .+|....... -...++++.|++. .+|..+..+..+.+ +.+++|.+ +..|..++.+++|.
T Consensus 362 i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt 438 (565)
T KOG0472|consen 362 ITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLT 438 (565)
T ss_pred hhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcce
Confidence 57788888888887 4553332333 3789999999998 66776766665554 45555554 47888899999999
Q ss_pred EEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCc
Q 007762 423 ILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNN 502 (590)
Q Consensus 423 ~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 502 (590)
.|++++|.+...+...+....|+.++++.|.+ ..+|.. +.....++.+-.++|++....|+.+.++.+|..|||.+|.
T Consensus 439 ~L~L~NN~Ln~LP~e~~~lv~Lq~LnlS~NrF-r~lP~~-~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNd 516 (565)
T KOG0472|consen 439 FLDLSNNLLNDLPEEMGSLVRLQTLNLSFNRF-RMLPEC-LYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNND 516 (565)
T ss_pred eeecccchhhhcchhhhhhhhhheeccccccc-ccchHH-HhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCc
Confidence 99999999986666666777899999999998 677876 6667778888888999997777779999999999999999
Q ss_pred ccCCCcccccCCCCCCEEECcCCccC
Q 007762 503 LEGEVPVQLCKLNQLQLLDLSNNNLH 528 (590)
Q Consensus 503 l~~~~~~~~~~l~~L~~L~l~~n~l~ 528 (590)
+. .+|..+++|.+|++|++++|++.
T Consensus 517 lq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 517 LQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hh-hCChhhccccceeEEEecCCccC
Confidence 98 88999999999999999999998
No 6
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-34 Score=292.59 Aligned_cols=475 Identities=27% Similarity=0.269 Sum_probs=347.4
Q ss_pred cccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeeccccc
Q 007762 8 GVLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLR 87 (590)
Q Consensus 8 ~~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~ 87 (590)
..||.+.+.+-. +..|+++.|- +. ..|-.+.++.-+|++|++++|.+.. .| ..+..+.+|+.|+++.|.|.
T Consensus 11 ~~ip~~i~~~~~-~~~ln~~~N~--~l-~~pl~~~~~~v~L~~l~lsnn~~~~----fp-~~it~l~~L~~ln~s~n~i~ 81 (1081)
T KOG0618|consen 11 ELIPEQILNNEA-LQILNLRRNS--LL-SRPLEFVEKRVKLKSLDLSNNQISS----FP-IQITLLSHLRQLNLSRNYIR 81 (1081)
T ss_pred cccchhhccHHH-HHhhhccccc--cc-cCchHHhhheeeeEEeecccccccc----CC-chhhhHHHHhhcccchhhHh
Confidence 467766665555 8889988883 22 3333333355569999999998864 44 57788889999999999888
Q ss_pred ccCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCcccccccCC
Q 007762 88 GSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQS 167 (590)
Q Consensus 88 ~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~ 167 (590)
..|.+..++.+|+++.|.+|.+. ..|. .+..+.+|++|++++|.+. .+| ..+..+..+..+.+++|.......+
T Consensus 82 -~vp~s~~~~~~l~~lnL~~n~l~-~lP~-~~~~lknl~~LdlS~N~f~-~~P-l~i~~lt~~~~~~~s~N~~~~~lg~- 155 (1081)
T KOG0618|consen 82 -SVPSSCSNMRNLQYLNLKNNRLQ-SLPA-SISELKNLQYLDLSFNHFG-PIP-LVIEVLTAEEELAASNNEKIQRLGQ- 155 (1081)
T ss_pred -hCchhhhhhhcchhheeccchhh-cCch-hHHhhhcccccccchhccC-CCc-hhHHhhhHHHHHhhhcchhhhhhcc-
Confidence 67888888999999999999887 7777 7888999999999999876 444 3566677777777777722222111
Q ss_pred CCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCC
Q 007762 168 PSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHS 247 (590)
Q Consensus 168 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~ 247 (590)
..++.+++ ..+...+.++.....+.. .|++.+|.+. ... +.++++|+.+....|++..... .
T Consensus 156 -------~~ik~~~l-~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~d---ls~~~~l~~l~c~rn~ls~l~~----~ 217 (1081)
T KOG0618|consen 156 -------TSIKKLDL-RLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLD---LSNLANLEVLHCERNQLSELEI----S 217 (1081)
T ss_pred -------ccchhhhh-hhhhcccchhcchhhhhe--eeecccchhh-hhh---hhhccchhhhhhhhcccceEEe----c
Confidence 13555555 445555555555555544 6999999876 222 4688899999888887765321 4
Q ss_pred CCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcE
Q 007762 248 HKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEY 327 (590)
Q Consensus 248 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~ 327 (590)
-++|+.|+.++|.++ ....... ..+|++++++.+.++ .+|+++..+.+|+.++...|.+. .+|..++. ..+|+.
T Consensus 218 g~~l~~L~a~~n~l~-~~~~~p~--p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~-~~~L~~ 291 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLT-TLDVHPV--PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISR-ITSLVS 291 (1081)
T ss_pred CcchheeeeccCcce-eeccccc--cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhh-hhhHHH
Confidence 568889999999887 2222221 458999999999998 67799999999999999999997 88888774 788999
Q ss_pred EEccCCcCCCccCccccCccccCceeccCccccccCCccccCCC-CCCEEEccCCcccccCccccCCCCCccEEECCCCc
Q 007762 328 LALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCF-VLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNH 406 (590)
Q Consensus 328 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 406 (590)
+.+..|.+.. +|.....+..|++|++..|.+....+..+.-.. +++.++.+.+++.......=.....|+.|.+.+|.
T Consensus 292 l~~~~nel~y-ip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~ 370 (1081)
T KOG0618|consen 292 LSAAYNELEY-IPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNH 370 (1081)
T ss_pred HHhhhhhhhh-CCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCc
Confidence 9999998874 566667789999999999998733333333332 36777777777763332222345678888999998
Q ss_pred CcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCC-CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccc
Q 007762 407 LEGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISD 485 (590)
Q Consensus 407 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~ 485 (590)
+++.....+.+..+|+.|++++|++...+...+. +..|+.|++|||++ ..+|.. +..+..|++|...+|++. ..|
T Consensus 371 Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL-~~Lp~t-va~~~~L~tL~ahsN~l~-~fP- 446 (1081)
T KOG0618|consen 371 LTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKL-TTLPDT-VANLGRLHTLRAHSNQLL-SFP- 446 (1081)
T ss_pred ccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchh-hhhhHH-HHhhhhhHHHhhcCCcee-ech-
Confidence 8877777788888999999999988744444433 66788889999988 477765 778888999988888887 667
Q ss_pred cccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCc
Q 007762 486 WVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNN 526 (590)
Q Consensus 486 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 526 (590)
.+..++.|+.+|++.|+++...-......|+|++||+++|.
T Consensus 447 e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 447 ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 57788899999999888885443333344789999999987
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=4.1e-35 Score=270.54 Aligned_cols=451 Identities=26% Similarity=0.339 Sum_probs=339.9
Q ss_pred CCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCC
Q 007762 46 PSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSI 125 (590)
Q Consensus 46 ~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L 125 (590)
..|+.+.+++|.+.. ....+.++..|.+|++++|++. ..|++++.+..++.++.+.|++. .+|. .+..+.+|
T Consensus 45 v~l~~lils~N~l~~-----l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~-~i~s~~~l 116 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEV-----LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPE-QIGSLISL 116 (565)
T ss_pred cchhhhhhccCchhh-----ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccH-HHhhhhhh
Confidence 458899999999854 3368899999999999999998 88999999999999999999998 8888 78889999
Q ss_pred cEEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEE
Q 007762 126 EELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYV 205 (590)
Q Consensus 126 ~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 205 (590)
+.+++++|.+.. .+ +.++.+..+..++..+|.+. ..|..+..+.++..+
T Consensus 117 ~~l~~s~n~~~e-l~-~~i~~~~~l~dl~~~~N~i~-----------------------------slp~~~~~~~~l~~l 165 (565)
T KOG0472|consen 117 VKLDCSSNELKE-LP-DSIGRLLDLEDLDATNNQIS-----------------------------SLPEDMVNLSKLSKL 165 (565)
T ss_pred hhhhccccceee-cC-chHHHHhhhhhhhccccccc-----------------------------cCchHHHHHHHHHHh
Confidence 999999998862 22 45666666776666555432 367778888899999
Q ss_pred EcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCce
Q 007762 206 DLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNA 285 (590)
Q Consensus 206 ~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~ 285 (590)
++.+|++. ..|.... +++.|++|+.-.|.+.. +|..++.+.+|..|++..|++. .+| .|. ++..|++++++.|.
T Consensus 166 ~~~~n~l~-~l~~~~i-~m~~L~~ld~~~N~L~t-lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~-gcs~L~Elh~g~N~ 239 (565)
T KOG0472|consen 166 DLEGNKLK-ALPENHI-AMKRLKHLDCNSNLLET-LPPELGGLESLELLYLRRNKIR-FLP-EFP-GCSLLKELHVGENQ 239 (565)
T ss_pred hccccchh-hCCHHHH-HHHHHHhcccchhhhhc-CChhhcchhhhHHHHhhhcccc-cCC-CCC-ccHHHHHHHhcccH
Confidence 99999998 5555543 48999999998887664 6777899999999999999997 777 343 37899999999999
Q ss_pred ecccCCcccC-CCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCC
Q 007762 286 LDGSIPSSFG-NMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIP 364 (590)
Q Consensus 286 ~~~~~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~ 364 (590)
+. .+|.... .+.++.+||+.+|+++ ++|++++. +.+|++||+++|.+++ .|..++++ .|+.|.+.+|++...-.
T Consensus 240 i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl-LrsL~rLDlSNN~is~-Lp~sLgnl-hL~~L~leGNPlrTiRr 314 (565)
T KOG0472|consen 240 IE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL-LRSLERLDLSNNDISS-LPYSLGNL-HLKFLALEGNPLRTIRR 314 (565)
T ss_pred HH-hhHHHHhcccccceeeeccccccc-cCchHHHH-hhhhhhhcccCCcccc-CCcccccc-eeeehhhcCCchHHHHH
Confidence 98 6676554 8899999999999998 99999875 8899999999999986 67888888 89999999887642110
Q ss_pred ccc-----------------------------------------cCCCCCCEEEccCCcccccCccccCC--CCCccEEE
Q 007762 365 QSL-----------------------------------------SKCFVLEGLFLNNNSLSGMIPRWLGN--LTRLQHIM 401 (590)
Q Consensus 365 ~~l-----------------------------------------~~~~~L~~L~l~~n~~~~~~~~~~~~--l~~L~~L~ 401 (590)
+.+ ....+.+.|+++.-+++....+.|.. -.-.+..+
T Consensus 315 ~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~Vn 394 (565)
T KOG0472|consen 315 EIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVN 394 (565)
T ss_pred HHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEe
Confidence 000 11123444555554444222222321 11245555
Q ss_pred CCCCcCcCCCCcccCCCCCCc-EEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCC
Q 007762 402 MPKNHLEGPIPVEFCQLDWLQ-ILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLN 480 (590)
Q Consensus 402 L~~n~~~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~ 480 (590)
++.|++. .+|..+..+..+. .+.+++|.+.......-..++|..|++++|.+ ..+|.. +..+..|+.|+++.|.+.
T Consensus 395 fskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~L-n~LP~e-~~~lv~Lq~LnlS~NrFr 471 (565)
T KOG0472|consen 395 FSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLL-NDLPEE-MGSLVRLQTLNLSFNRFR 471 (565)
T ss_pred cccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchh-hhcchh-hhhhhhhheecccccccc
Confidence 5666555 4444444443332 23444444432222222377899999999988 688887 777888999999999998
Q ss_pred CCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccccccCCccccccCCCCCC
Q 007762 481 GSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTTLHESYSNSSSPN 551 (590)
Q Consensus 481 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~~~~~~~~~~~ 551 (590)
.+|.++..+..++.+-.++|++....|..+.++.+|..||+.+|.+. .+|+.+.+++-..-.....+|.
T Consensus 472 -~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 472 -MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred -cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCcc
Confidence 88998888888888888889998777777999999999999999998 7899999887665555555553
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-32 Score=278.47 Aligned_cols=469 Identities=25% Similarity=0.249 Sum_probs=333.6
Q ss_pred CCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCc
Q 007762 13 QGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPW 92 (590)
Q Consensus 13 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 92 (590)
+..+++-+|+.|+++++.+ +..|..+. .+.+|+.|+++.|.|.. .+ .+..++.+|++++|.+|.+. .+|.
T Consensus 39 ~~~~~~v~L~~l~lsnn~~---~~fp~~it-~l~~L~~ln~s~n~i~~----vp-~s~~~~~~l~~lnL~~n~l~-~lP~ 108 (1081)
T KOG0618|consen 39 EFVEKRVKLKSLDLSNNQI---SSFPIQIT-LLSHLRQLNLSRNYIRS----VP-SSCSNMRNLQYLNLKNNRLQ-SLPA 108 (1081)
T ss_pred HHhhheeeeEEeecccccc---ccCCchhh-hHHHHhhcccchhhHhh----Cc-hhhhhhhcchhheeccchhh-cCch
Confidence 3556677799999999976 78888888 88999999999999854 55 78899999999999999888 8999
Q ss_pred cccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCC
Q 007762 93 CMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTA 172 (590)
Q Consensus 93 ~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~ 172 (590)
.+..+.+|++|+++.|.+. .+|. .+..++.+..+..++|... ..++... ++.+++..+.+.........
T Consensus 109 ~~~~lknl~~LdlS~N~f~-~~Pl-~i~~lt~~~~~~~s~N~~~-----~~lg~~~-ik~~~l~~n~l~~~~~~~i~--- 177 (1081)
T KOG0618|consen 109 SISELKNLQYLDLSFNHFG-PIPL-VIEVLTAEEELAASNNEKI-----QRLGQTS-IKKLDLRLNVLGGSFLIDIY--- 177 (1081)
T ss_pred hHHhhhcccccccchhccC-CCch-hHHhhhHHHHHhhhcchhh-----hhhcccc-chhhhhhhhhcccchhcchh---
Confidence 9999999999999999997 8887 7888899999999988322 1222222 66666666655443332211
Q ss_pred CCcccc-eEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcc
Q 007762 173 PNFQLS-RLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRL 251 (590)
Q Consensus 173 ~~~~L~-~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 251 (590)
.++ .+++ ..+.+. ...+..+.+|+.|....|.+. .+. ...++++.|+...|.+....... ...+|
T Consensus 178 ---~l~~~ldL-r~N~~~---~~dls~~~~l~~l~c~rn~ls-~l~----~~g~~l~~L~a~~n~l~~~~~~p--~p~nl 243 (1081)
T KOG0618|consen 178 ---NLTHQLDL-RYNEME---VLDLSNLANLEVLHCERNQLS-ELE----ISGPSLTALYADHNPLTTLDVHP--VPLNL 243 (1081)
T ss_pred ---hhheeeec-ccchhh---hhhhhhccchhhhhhhhcccc-eEE----ecCcchheeeeccCcceeecccc--ccccc
Confidence 233 3666 333332 233556777788877777665 222 24578888888888777433322 34578
Q ss_pred cEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEcc
Q 007762 252 RLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALS 331 (590)
Q Consensus 252 ~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~ 331 (590)
++++++.+.+. .+|.|+.. +++|+.++..+|.++ .+|..+..+.+|+.+.+..|++. .+|.... +...|++|++.
T Consensus 244 ~~~dis~n~l~-~lp~wi~~-~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le-~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 244 QYLDISHNNLS-NLPEWIGA-CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLE-GLKSLRTLDLQ 318 (1081)
T ss_pred eeeecchhhhh-cchHHHHh-cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCccc-ccceeeeeeeh
Confidence 88888888887 77777766 788888888888886 67777778888888888888877 6666554 37788888888
Q ss_pred CCcCCCccCccccCcc-ccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCC
Q 007762 332 NNSLEGHMFSRNFNLT-NLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGP 410 (590)
Q Consensus 332 ~n~i~~~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~ 410 (590)
.|++.......+.-.. .++.|..+.+++.......=...+.|+.|++.+|.+++.....+.+..+|+.|+|++|++...
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 8887654443333222 256666666665522211122345677788888888877767777888888888888887744
Q ss_pred CCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCC-ccccccc
Q 007762 411 IPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGS-ISDWVDG 489 (590)
Q Consensus 411 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~-~~~~~~~ 489 (590)
....+.++..|+.|++++|+++........+..|++|...+|.+ ...| . +..++.|+.+|+|.|+++.. +|.....
T Consensus 399 pas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l-~~fP-e-~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQL-LSFP-E-LAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCce-eech-h-hhhcCcceEEecccchhhhhhhhhhCCC
Confidence 34457778888888888888875554444567788888888877 3555 3 77889999999999999853 3433333
Q ss_pred cCCCCEEECcCCcccCCCcccccCCCCCCEEECcCC
Q 007762 490 LSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNN 525 (590)
Q Consensus 490 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 525 (590)
++|++||+++|.-....-+.|..+.++...++.-|
T Consensus 476 -p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 476 -PNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred -cccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 89999999999755455556666666666666655
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=3.4e-32 Score=264.38 Aligned_cols=370 Identities=23% Similarity=0.303 Sum_probs=234.4
Q ss_pred CCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCCc
Q 007762 47 SLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIE 126 (590)
Q Consensus 47 ~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~ 126 (590)
-.+-.++++|.+++ ...+.+...+..++.|.|..+++. .+|+.++.|.+|++|.+++|++. .+-. .+..++.|+
T Consensus 8 FVrGvDfsgNDFsg---~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhG-ELs~Lp~LR 81 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSG---DRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHG-ELSDLPRLR 81 (1255)
T ss_pred eeecccccCCcCCC---CcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhh-hhccchhhH
Confidence 34555566665554 233355555666666666666655 56666666666666666666665 4433 455566666
Q ss_pred EEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEE
Q 007762 127 ELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVD 206 (590)
Q Consensus 127 ~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 206 (590)
.+.+..|.+..+ -+|..+..+..|..||
T Consensus 82 sv~~R~N~LKns----------------------------------------------------GiP~diF~l~dLt~lD 109 (1255)
T KOG0444|consen 82 SVIVRDNNLKNS----------------------------------------------------GIPTDIFRLKDLTILD 109 (1255)
T ss_pred HHhhhccccccC----------------------------------------------------CCCchhcccccceeee
Confidence 666665554311 1455566677777888
Q ss_pred cCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCcee
Q 007762 207 LSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNAL 286 (590)
Q Consensus 207 ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~ 286 (590)
+|+|++. +.|..+ ...+++-.|++++|.|..+...-+.++..|-.||+++|++. .+|..
T Consensus 110 LShNqL~-EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ------------------ 168 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQ------------------ 168 (1255)
T ss_pred cchhhhh-hcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHH------------------
Confidence 8888776 666654 45555555555555554433333334444444444444443 44444
Q ss_pred cccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCC-CccCccccCccccCceeccCccccccCCc
Q 007762 287 DGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLE-GHMFSRNFNLTNLKWLQLEGNHFVGEIPQ 365 (590)
Q Consensus 287 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 365 (590)
++.+..|++|++++|.+. ...-.....+.+|+.|.+++.+-+ ..+|..+..+.+|..++++.|.+. .+|+
T Consensus 169 -------~RRL~~LqtL~Ls~NPL~-hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPe 239 (1255)
T KOG0444|consen 169 -------IRRLSMLQTLKLSNNPLN-HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPE 239 (1255)
T ss_pred -------HHHHhhhhhhhcCCChhh-HHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchH
Confidence 444444444444444332 111011112344555555544322 345667777888888899888887 7888
Q ss_pred cccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCccc
Q 007762 366 SLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIE 445 (590)
Q Consensus 366 ~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~ 445 (590)
.+.++++|+.|++++|+++ .+....+.+.+|++|+++.|+++ .+|.+++++++|+.|.+.+|+++.
T Consensus 240 cly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~F------------ 305 (1255)
T KOG0444|consen 240 CLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTF------------ 305 (1255)
T ss_pred HHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccc------------
Confidence 8888999999999999988 45556777889999999999998 789999999999999999998762
Q ss_pred EEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCC
Q 007762 446 HVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNN 525 (590)
Q Consensus 446 ~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 525 (590)
.-||.+ +..+..|+++..++|.+. ..|+.++.|..|+.|.|+.|++. .+|+.+.-++.|+.||+.+|
T Consensus 306 ----------eGiPSG-IGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 306 ----------EGIPSG-IGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred ----------cCCccc-hhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCC
Confidence 124444 666667777777777776 67777777777777777777776 66777777777777777777
Q ss_pred ccCCCC
Q 007762 526 NLHGPI 531 (590)
Q Consensus 526 ~l~~~~ 531 (590)
+-.-..
T Consensus 373 pnLVMP 378 (1255)
T KOG0444|consen 373 PNLVMP 378 (1255)
T ss_pred cCccCC
Confidence 665333
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=8.6e-32 Score=261.61 Aligned_cols=348 Identities=26% Similarity=0.323 Sum_probs=300.5
Q ss_pred CcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCC-CCchh
Q 007762 190 VIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRG-HIPVE 268 (590)
Q Consensus 190 ~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~ 268 (590)
+.+|.....+++++.|.+...++. .+|+.+ ..+.+|+.|.+..|++.... ..+..++.|+.+.+.+|.+.. -+|..
T Consensus 22 ~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL-~~lqkLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~d 98 (1255)
T KOG0444|consen 22 DRFPHDVEQMTQMTWLKLNRTKLE-QVPEEL-SRLQKLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTD 98 (1255)
T ss_pred CcCchhHHHhhheeEEEechhhhh-hChHHH-HHHhhhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCch
Confidence 357888889999999999999887 889886 89999999999999888744 447789999999999998753 47888
Q ss_pred hhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccc
Q 007762 269 IGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTN 348 (590)
Q Consensus 269 ~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~ 348 (590)
++. +..|..|++++|+++ ..|..+..-+++-+|++++|+|. +||..++.++..|-.|++++|++.. +|.....+..
T Consensus 99 iF~-l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~-LPPQ~RRL~~ 174 (1255)
T KOG0444|consen 99 IFR-LKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEM-LPPQIRRLSM 174 (1255)
T ss_pred hcc-cccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhh-cCHHHHHHhh
Confidence 887 889999999999999 78999999999999999999998 9999999999999999999999975 6667888999
Q ss_pred cCceeccCccccccCCccccCCCCCCEEEccCCcc-cccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcc
Q 007762 349 LKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSL-SGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDIS 427 (590)
Q Consensus 349 L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~-~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~ 427 (590)
|++|.+++|++.-.--..+..+++|+.|.+++.+- ...+|..+..+.+|..+|++.|.+. ..|+++.++++|+.|+++
T Consensus 175 LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS 253 (1255)
T KOG0444|consen 175 LQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLS 253 (1255)
T ss_pred hhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccC
Confidence 99999999987633334555677888999998653 3568889999999999999999998 789999999999999999
Q ss_pred cCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCC-CccccccccCCCCEEECcCCcccCC
Q 007762 428 DNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNG-SISDWVDGLSQLSHLILGHNNLEGE 506 (590)
Q Consensus 428 ~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~ 506 (590)
+|+|++.....-.-.+|++|++|.|++ ..+|.. +..++.|+.|.+.+|+++- -+|..++.+.+|+++..++|.+. .
T Consensus 254 ~N~iteL~~~~~~W~~lEtLNlSrNQL-t~LP~a-vcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-l 330 (1255)
T KOG0444|consen 254 GNKITELNMTEGEWENLETLNLSRNQL-TVLPDA-VCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-L 330 (1255)
T ss_pred cCceeeeeccHHHHhhhhhhccccchh-ccchHH-HhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-c
Confidence 999986555444467899999999999 466766 8999999999999999873 48899999999999999999997 8
Q ss_pred CcccccCCCCCCEEECcCCccCCCCccccccCCccccccCCCC
Q 007762 507 VPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTTLHESYSNSSS 549 (590)
Q Consensus 507 ~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~~~~~~~~~ 549 (590)
.|+.++.|+.|+.|.|+.|.+. .+|+.+.-++-....+...+
T Consensus 331 VPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 331 VPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred CchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCC
Confidence 9999999999999999999998 78988776664444444444
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.4e-22 Score=229.89 Aligned_cols=346 Identities=20% Similarity=0.214 Sum_probs=223.4
Q ss_pred ccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCC-CcccEEEcCCCcCccccchH
Q 007762 141 LEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQ-HDLEYVDLSHMKMNGEFPTW 219 (590)
Q Consensus 141 ~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~~~~~~~~~ 219 (590)
...|.+|.+|+.|.+..+..... ......+|..+..+ .+|+.|.+.++.+. .+|..
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~----------------------~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~ 607 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQK----------------------KEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSN 607 (1153)
T ss_pred HHHHhcCccccEEEEeccccccc----------------------ccceeecCcchhhcCcccEEEEecCCCCC-CCCCc
Confidence 34567788888887765432110 01111233344333 35777777776664 55655
Q ss_pred HhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCC
Q 007762 220 LLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKF 299 (590)
Q Consensus 220 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~ 299 (590)
+ ...+|+.|++.++.+.. .+..+..+++|+.|+++++.....+|. +. .+++|++|++++|.....+|..+..+++
T Consensus 608 f--~~~~L~~L~L~~s~l~~-L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls-~l~~Le~L~L~~c~~L~~lp~si~~L~~ 682 (1153)
T PLN03210 608 F--RPENLVKLQMQGSKLEK-LWDGVHSLTGLRNIDLRGSKNLKEIPD-LS-MATNLETLKLSDCSSLVELPSSIQYLNK 682 (1153)
T ss_pred C--CccCCcEEECcCccccc-cccccccCCCCCEEECCCCCCcCcCCc-cc-cCCcccEEEecCCCCccccchhhhccCC
Confidence 3 45677777777776654 333455677777777776643335553 22 2667777777776555567777777777
Q ss_pred CcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEcc
Q 007762 300 LQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLN 379 (590)
Q Consensus 300 L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~ 379 (590)
|+.|++++|.....+|... .+++|+.|++++|......|.. ..+|++|++++|.+. .+|..+ .+++|+.|.+.
T Consensus 683 L~~L~L~~c~~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~ 755 (1153)
T PLN03210 683 LEDLDMSRCENLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILC 755 (1153)
T ss_pred CCEEeCCCCCCcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-ccccccccccc
Confidence 7777777765444666544 4677777777777544433322 356777777777765 445433 46667777776
Q ss_pred CCccc-------ccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCc
Q 007762 380 NNSLS-------GMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKN 452 (590)
Q Consensus 380 ~n~~~-------~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n 452 (590)
++... ...+......++|+.|++++|.....+|..+.++++|+.|++++|...+.+|....+++|+.|++++|
T Consensus 756 ~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c 835 (1153)
T PLN03210 756 EMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGC 835 (1153)
T ss_pred ccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCC
Confidence 64321 11111223346788888888876667788888888888888888765556666666778888888887
Q ss_pred cCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCc
Q 007762 453 MLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNN 526 (590)
Q Consensus 453 ~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 526 (590)
.....+|.. .++|+.|++++|.++ .+|.++..+++|+.|++++|+-...+|..+..+++|+.+++++|+
T Consensus 836 ~~L~~~p~~----~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 836 SRLRTFPDI----STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred Ccccccccc----ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 654444432 357888888888887 677788888888888888865555677777788888888888875
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=6.6e-22 Score=224.43 Aligned_cols=343 Identities=19% Similarity=0.195 Sum_probs=216.2
Q ss_pred CCCcccccCCCCCcEEEeecccc------cccCCccccCCC-CCcEEEccccccccccCCCCccCCCCCcEEECcCCccc
Q 007762 64 KILDRGLCSLVHLQELYIYNNDL------RGSLPWCMANMT-SLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQ 136 (590)
Q Consensus 64 ~~~~~~l~~l~~L~~L~L~~n~i------~~~~~~~~~~l~-~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~ 136 (590)
.+...+|.++++|+.|.+..+.. ...+|..+..++ +|+.|.+.++.+. .+|. .+ ...+|++|+++++.+.
T Consensus 548 ~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~-~f-~~~~L~~L~L~~s~l~ 624 (1153)
T PLN03210 548 HIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPS-NF-RPENLVKLQMQGSKLE 624 (1153)
T ss_pred eecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCC-cC-CccCCcEEECcCcccc
Confidence 34556778888888888865532 224566666553 5888888887776 6666 34 4577888888877664
Q ss_pred cccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCcccc
Q 007762 137 IPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEF 216 (590)
Q Consensus 137 ~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~ 216 (590)
..+ ..+..+++|+.++++++.. ...+| .+..+++|+.|++++|.....+
T Consensus 625 -~L~-~~~~~l~~Lk~L~Ls~~~~----------------------------l~~ip-~ls~l~~Le~L~L~~c~~L~~l 673 (1153)
T PLN03210 625 -KLW-DGVHSLTGLRNIDLRGSKN----------------------------LKEIP-DLSMATNLETLKLSDCSSLVEL 673 (1153)
T ss_pred -ccc-cccccCCCCCEEECCCCCC----------------------------cCcCC-ccccCCcccEEEecCCCCcccc
Confidence 221 2234556666666554421 11122 2455678888888888665677
Q ss_pred chHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCC
Q 007762 217 PTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGN 296 (590)
Q Consensus 217 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~ 296 (590)
|..+ .++++|+.|++++|.....+|..+ .+++|+.|++++|...+.+|. ..++|+.|++++|.+. .+|..+ .
T Consensus 674 p~si-~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~----~~~nL~~L~L~~n~i~-~lP~~~-~ 745 (1153)
T PLN03210 674 PSSI-QYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD----ISTNISWLDLDETAIE-EFPSNL-R 745 (1153)
T ss_pred chhh-hccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCcccccc----ccCCcCeeecCCCccc-cccccc-c
Confidence 7765 788888888888876555555544 677888888888754434443 2457888888888876 566554 4
Q ss_pred CCCCcEEEccCcccc---c---ccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCC
Q 007762 297 MKFLQLLDVTNNQLT---G---EIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKC 370 (590)
Q Consensus 297 l~~L~~L~l~~n~~~---~---~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~ 370 (590)
+++|+.|.+.++... + .++......+++|+.|++++|.....+|..+.++++|+.|++++|...+.+|..+ .+
T Consensus 746 l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L 824 (1153)
T PLN03210 746 LENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NL 824 (1153)
T ss_pred ccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Cc
Confidence 677777777654321 0 1111122234577777777776666667777777777777777765544555544 56
Q ss_pred CCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCc-CCCCCCCCCCCCcccEEEC
Q 007762 371 FVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNN-ISGSLPSCFHPLSIEHVHL 449 (590)
Q Consensus 371 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~L~~L~l 449 (590)
++|+.|++++|.....+|.. .++|+.|+|++|.+. .+|..+..+++|+.|++++|. +....+....++.|+.+++
T Consensus 825 ~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l 900 (1153)
T PLN03210 825 ESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDF 900 (1153)
T ss_pred cccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeec
Confidence 77777777777544343332 356777777777776 466677777777777777754 3333333334566666666
Q ss_pred cCcc
Q 007762 450 SKNM 453 (590)
Q Consensus 450 ~~n~ 453 (590)
++|.
T Consensus 901 ~~C~ 904 (1153)
T PLN03210 901 SDCG 904 (1153)
T ss_pred CCCc
Confidence 6664
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=3.2e-24 Score=198.52 Aligned_cols=277 Identities=20% Similarity=0.184 Sum_probs=157.6
Q ss_pred ccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCC-CCCCCCCCCCCcccccCCCCCcEEEeeccccc
Q 007762 9 VLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSD-STLGTNSSKILDRGLCSLVHLQELYIYNNDLR 87 (590)
Q Consensus 9 ~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~-~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~ 87 (590)
.||+.+|..+++||.||||.| .++..-|..|. ++++|..|-+.+ |+|++ ++...|.++..|+.|.+.-|.+.
T Consensus 81 ~iP~~aF~~l~~LRrLdLS~N--~Is~I~p~AF~-GL~~l~~Lvlyg~NkI~~----l~k~~F~gL~slqrLllNan~i~ 153 (498)
T KOG4237|consen 81 SIPPGAFKTLHRLRRLDLSKN--NISFIAPDAFK-GLASLLSLVLYGNNKITD----LPKGAFGGLSSLQRLLLNANHIN 153 (498)
T ss_pred cCChhhccchhhhceeccccc--chhhcChHhhh-hhHhhhHHHhhcCCchhh----hhhhHhhhHHHHHHHhcChhhhc
Confidence 445555555555555555555 33333333333 555544444433 44443 45455555555555555555555
Q ss_pred ccCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCcccccccCC
Q 007762 88 GSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQS 167 (590)
Q Consensus 88 ~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~ 167 (590)
-....+|..+++|..|.+.+|.+. .++...+..+..++.+++..|.+.. ..+++.+........ +..
T Consensus 154 Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~ic------dCnL~wla~~~a~~~-iet----- 220 (498)
T KOG4237|consen 154 CIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFIC------DCNLPWLADDLAMNP-IET----- 220 (498)
T ss_pred chhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCcccc------ccccchhhhHHhhch-hhc-----
Confidence 444455555555555555555554 4444445555555555555544321 111111111100000 000
Q ss_pred CCCCCCCcccceEeccCCCCCCCcCChhc-cCCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCC
Q 007762 168 PSLTAPNFQLSRLSLSSGYGDGVIFPKFL-YHQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIH 246 (590)
Q Consensus 168 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~l-~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~ 246 (590)
.+.. ...-..+ +...+...-+..+ .....+..--.+.+......|...|..+++|++|++++|+++.+...+|.
T Consensus 221 --sgar--c~~p~rl-~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe 295 (498)
T KOG4237|consen 221 --SGAR--CVSPYRL-YYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFE 295 (498)
T ss_pred --ccce--ecchHHH-HHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhc
Confidence 0000 0000000 0001111111111 11222322233444455678888899999999999999999999999999
Q ss_pred CCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccc
Q 007762 247 SHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLT 311 (590)
Q Consensus 247 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~ 311 (590)
...+++.|.+..|++. .+....+..+..|++|+|.+|.++...|..|..+..|.+|++-.|.+.
T Consensus 296 ~~a~l~eL~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 296 GAAELQELYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred chhhhhhhhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 9999999999999997 777777777999999999999999889999999999999999887665
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=9.3e-21 Score=199.54 Aligned_cols=267 Identities=25% Similarity=0.272 Sum_probs=170.9
Q ss_pred CcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEcc
Q 007762 227 LESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVT 306 (590)
Q Consensus 227 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~ 306 (590)
-..|+++++.++. +|..+. ++|+.|++.+|.++ .+|. .+++|++|++++|.++ .+|.. .++|+.|+++
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 4445555555443 232222 24556666666555 3442 1456666666666665 34432 2456666666
Q ss_pred CcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCccccc
Q 007762 307 NNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGM 386 (590)
Q Consensus 307 ~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~ 386 (590)
+|.+. .+|.. ..+|+.|++++|++... |. ..++|+.|++++|++.+ +|.. ...|+.|++++|.+++
T Consensus 271 ~N~L~-~Lp~l----p~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 271 SNPLT-HLPAL----PSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred CCchh-hhhhc----hhhcCEEECcCCccccc-cc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 66665 44431 34566666666666542 22 23566777777776663 3321 2346667777777763
Q ss_pred CccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccC
Q 007762 387 IPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNY 466 (590)
Q Consensus 387 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~ 466 (590)
+|.. ..+|+.|++++|++.+ +|.. ..+|+.|++++|.+.. +|.. +.+|+.|++++|.+. .+|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l--~~~L~~LdLs~N~Lt-~LP~l----~ 401 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL--PSGLKELIVSGNRLT-SLPVL----P 401 (788)
T ss_pred cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc--ccccceEEecCCccc-CCCCc----c
Confidence 3321 2467788888887773 4432 3467777888888774 4432 357888888888884 45543 2
Q ss_pred CCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccccccCC
Q 007762 467 HSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTT 539 (590)
Q Consensus 467 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 539 (590)
++|+.|++++|.+++ +|... .+|+.|++++|+++ .+|..+..+++|+.|++++|++++..|..+..+.
T Consensus 402 s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l~ 469 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 469 (788)
T ss_pred cCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHHh
Confidence 579999999999984 66543 47889999999998 7899999999999999999999998888886554
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.85 E-value=1.4e-23 Score=194.40 Aligned_cols=311 Identities=19% Similarity=0.210 Sum_probs=201.7
Q ss_pred EccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccC-C
Q 007762 255 DISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSN-N 333 (590)
Q Consensus 255 ~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~-n 333 (590)
+-++-.++ ++|..+ ++.-+.++|..|.++...+..|+.+++|+.||+++|.|+ .|....|.+++.+..|-+.+ |
T Consensus 52 dCr~~GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EccCCCcc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCC
Confidence 33333444 555544 346666666666666555556666666666677666666 55555555666666555544 6
Q ss_pred cCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCc-----
Q 007762 334 SLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLE----- 408 (590)
Q Consensus 334 ~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~----- 408 (590)
+|+......|.++..++.|.+.-|++.......|..++++..|.+.+|.+.......|..+..++++.+..|.+.
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 666655666666666666666666666555566666666666666666666444446666666666666665532
Q ss_pred -------CCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCC--cccEEECcCccCCCCCCccccccCCCCcEEEcCCCcC
Q 007762 409 -------GPIPVEFCQLDWLQILDISDNNISGSLPSCFHPL--SIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRL 479 (590)
Q Consensus 409 -------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~--~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l 479 (590)
...|..++......-..+.+.++....+..|... .+.+--.+.+......|...|..+++|+.|++++|++
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 1122223333333333344444443333333322 2222222334344566777799999999999999999
Q ss_pred CCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCccccccCCccccccCCCCCCCcccee--
Q 007762 480 NGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTTLHESYSNSSSPNKQFEIF-- 557 (590)
Q Consensus 480 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~-- 557 (590)
+++-+.+|.+...+++|.|..|++...-...|.++..|+.|+|.+|+|+..-|..|+.+......+..++|.-+-...
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~w 366 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAW 366 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHH
Confidence 998999999999999999999999877678899999999999999999999999999988888787777776553321
Q ss_pred ----ccccCCCCCCCCC
Q 007762 558 ----FFIQGPQGHPRLA 570 (590)
Q Consensus 558 ----~~~~~~~~np~~~ 570 (590)
+...+-.|||+-.
T Consensus 367 l~~Wlr~~~~~~~~~Cq 383 (498)
T KOG4237|consen 367 LGEWLRKKSVVGNPRCQ 383 (498)
T ss_pred HHHHHhhCCCCCCCCCC
Confidence 2223455777654
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=1.8e-19 Score=189.97 Aligned_cols=267 Identities=24% Similarity=0.308 Sum_probs=209.3
Q ss_pred CcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEE
Q 007762 200 HDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSL 279 (590)
Q Consensus 200 ~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L 279 (590)
..-..|+++++.++ .+|..+. ++|+.|++.+|.++.. |. .+++|++|++++|.++ .+|. .+++|+.|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~L-P~---lp~~Lk~LdLs~N~Lt-sLP~----lp~sL~~L 267 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLT-SLPV----LPPGLLEL 267 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCCC-CC---CCCCCcEEEecCCccC-cccC----ccccccee
Confidence 34668999999887 7887652 4799999999988863 32 3578999999999998 5664 25689999
Q ss_pred EccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccc
Q 007762 280 NISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHF 359 (590)
Q Consensus 280 ~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 359 (590)
++++|.++ .+|..+ +.|+.|++++|++. .+|.. .++|+.|++++|.+.+. |.. ..+|+.|++++|.+
T Consensus 268 ~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~----p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L 334 (788)
T PRK15387 268 SIFSNPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQL 334 (788)
T ss_pred eccCCchh-hhhhch---hhcCEEECcCCccc-ccccc----ccccceeECCCCccccC-CCC---cccccccccccCcc
Confidence 99999987 555533 56889999999998 77652 57899999999998863 332 34688899999998
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCC
Q 007762 360 VGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCF 439 (590)
Q Consensus 360 ~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 439 (590)
. .+|.. ..+|+.|++++|++++ +|.. ..+|+.|++++|++.. +|.. ..+|+.|++++|.+++ +|..
T Consensus 335 ~-~LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l- 400 (788)
T PRK15387 335 T-SLPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL- 400 (788)
T ss_pred c-ccccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc-
Confidence 7 35532 2579999999999984 4443 3578889999999884 5543 3579999999999985 4433
Q ss_pred CCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccC
Q 007762 440 HPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCK 513 (590)
Q Consensus 440 ~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 513 (590)
+.+|+.|++++|.+. .+|.. ..+|+.|++++|+++ .+|..+..+++|+.|+|++|++++..+..+..
T Consensus 401 -~s~L~~LdLS~N~Ls-sIP~l----~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 401 -PSELKELMVSGNRLT-SLPML----PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred -ccCCCEEEccCCcCC-CCCcc----hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 468999999999995 56653 347899999999998 78888999999999999999999887776633
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=2.5e-19 Score=190.09 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=136.8
Q ss_pred CCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEc
Q 007762 226 NLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDV 305 (590)
Q Consensus 226 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l 305 (590)
+...|++++++++. +|..+ .+.|+.|++++|.++ .+|..+. ++|++|++++|.++ .+|..+. ..|+.|++
T Consensus 179 ~~~~L~L~~~~Lts-LP~~I--p~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACI--PEQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcCc-CCccc--ccCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 34555555555543 22211 234555566655555 4444332 35555555555555 3343332 24555555
Q ss_pred cCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccc
Q 007762 306 TNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSG 385 (590)
Q Consensus 306 ~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~ 385 (590)
++|.+. .+|..+ ..+|+.|++++|++.. +|..+ .++|+.|++++|++++
T Consensus 249 s~N~L~-~LP~~l---~s~L~~L~Ls~N~L~~-------------------------LP~~l--~~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 249 SINRIT-ELPERL---PSALQSLDLFHNKISC-------------------------LPENL--PEELRYLSVYDNSIRT 297 (754)
T ss_pred cCCccC-cCChhH---hCCCCEEECcCCccCc-------------------------ccccc--CCCCcEEECCCCcccc
Confidence 555554 444433 1244555555444442 23222 1345555555555542
Q ss_pred cCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCcccccc
Q 007762 386 MIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFN 465 (590)
Q Consensus 386 ~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~ 465 (590)
+|..+. ++|+.|++++|.+.. +|..+ .++|+.|++++|.+++ +|..+ +++|+.|++++|.+. .+|.. +
T Consensus 298 -LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l-~~sL~~L~Ls~N~L~-~LP~~-l-- 365 (754)
T PRK15370 298 -LPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASL-PPELQVLDVSKNQIT-VLPET-L-- 365 (754)
T ss_pred -Ccccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChhh-cCcccEEECCCCCCC-cCChh-h--
Confidence 232222 355666666666552 33322 2456666666666654 33322 356777777777763 45543 2
Q ss_pred CCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccc----cCCCCCCEEECcCCccCCCCccccccCC
Q 007762 466 YHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQL----CKLNQLQLLDLSNNNLHGPIPPCFDNTT 539 (590)
Q Consensus 466 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 539 (590)
.++|+.|++++|.++ .+|..+. ..|+.|++++|+++ .+|..+ ..++.+..|++.+|+++. ..+++++
T Consensus 366 p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~---~tl~~L~ 436 (754)
T PRK15370 366 PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE---RTIQNMQ 436 (754)
T ss_pred cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH---HHHHHHH
Confidence 257888888888887 4555554 36888888888887 555443 345778888888888873 3444443
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.73 E-value=1.6e-17 Score=176.46 Aligned_cols=203 Identities=22% Similarity=0.389 Sum_probs=134.4
Q ss_pred CcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEE
Q 007762 200 HDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSL 279 (590)
Q Consensus 200 ~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L 279 (590)
.+...|+++++.++ .+|..+ .+.|+.|++++|.+... +..+ .++|+.|++++|.++ .+|..+. ++|+.|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~LtsL-P~~l--~~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L 246 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACI---PEQITTLILDNNELKSL-PENL--QGNIKTLYANSNQLT-SIPATLP---DTIQEM 246 (754)
T ss_pred cCceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCCCcC-Chhh--ccCCCEEECCCCccc-cCChhhh---ccccEE
Confidence 35678888888877 667543 35788999999988863 3332 358999999999887 6776553 479999
Q ss_pred EccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccc
Q 007762 280 NISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHF 359 (590)
Q Consensus 280 ~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 359 (590)
++++|.+. .+|..+. ++|+.|++++|.+. .+|..+ .++|+.|++++|++.. +|..+ .++|+.|++++|.+
T Consensus 247 ~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l---~~sL~~L~Ls~N~Lt~-LP~~l--p~sL~~L~Ls~N~L 316 (754)
T PRK15370 247 ELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL---PEELRYLSVYDNSIRT-LPAHL--PSGITHLNVQSNSL 316 (754)
T ss_pred ECcCCccC-cCChhHh--CCCCEEECcCCccC-cccccc---CCCCcEEECCCCcccc-Ccccc--hhhHHHHHhcCCcc
Confidence 99999888 6676654 57999999999888 677654 3578889998888775 33322 24677777777777
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCC
Q 007762 360 VGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNIS 432 (590)
Q Consensus 360 ~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~ 432 (590)
.. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|.+. .+|..+. ++|+.|++++|.++
T Consensus 317 t~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt 380 (754)
T PRK15370 317 TA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT 380 (754)
T ss_pred cc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC
Confidence 63 34322 2466666676666653 343332 45666666666555 2343332 35555555555554
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=1e-18 Score=172.93 Aligned_cols=61 Identities=26% Similarity=0.332 Sum_probs=37.3
Q ss_pred CCCcEEEcCCCcCCC----CccccccccCCCCEEECcCCcccCC----CcccccCC-CCCCEEECcCCcc
Q 007762 467 HSLVTLDLSYNRLNG----SISDWVDGLSQLSHLILGHNNLEGE----VPVQLCKL-NQLQLLDLSNNNL 527 (590)
Q Consensus 467 ~~L~~L~ls~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l-~~L~~L~l~~n~l 527 (590)
+.|+.|++++|.+++ .+...+..+++|+++++++|.++.. ....+... +.|+.+++.+|++
T Consensus 250 ~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 250 ISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 567777777777652 2233445556777777777777744 33344444 5677777777653
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=1.8e-18 Score=171.11 Aligned_cols=261 Identities=24% Similarity=0.252 Sum_probs=125.0
Q ss_pred EeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccc------cCCccccCC
Q 007762 24 LDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRG------SLPWCMANM 97 (590)
Q Consensus 24 L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~------~~~~~~~~l 97 (590)
|+|.++ .+.+.....++..++.|++|+++++.+++.+.......+...++|++++++++.+.. .++..+..+
T Consensus 3 l~L~~~--~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 3 LSLKGE--LLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred cccccC--cccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 455555 444322223332555666666666665442222222344555566666666665541 122344556
Q ss_pred CCCcEEEccccccccccCCCCccCC---CCCcEEECcCCccccccC---ccccccC-CCccEEEccCCcccccccCCCCC
Q 007762 98 TSLRILYVSSNQLTGSISSSPLVHL---TSIEELHLSNNHFQIPIS---LEPLFNH-SRLKVFWAKNNEINAEITQSPSL 170 (590)
Q Consensus 98 ~~L~~L~ls~n~l~~~~~~~~l~~l---~~L~~L~ls~n~~~~~~~---~~~l~~l-~~L~~l~l~~~~~~~~~~~~~~~ 170 (590)
++|++|++++|.+....+. .+..+ ++|++|++++|.+.+... ...+..+ ++|+.+++++|.+.....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~----- 154 (319)
T cd00116 81 CGLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASC----- 154 (319)
T ss_pred CceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHH-----
Confidence 6666666666665422211 22222 236666666665542100 0122333 455555555554332100
Q ss_pred CCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHH---hhcCCCCcEEEccCCCCCCCC----cC
Q 007762 171 TAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWL---LENNTNLESLFLVNDSLAGPF----RL 243 (590)
Q Consensus 171 ~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~---~~~l~~L~~L~l~~~~~~~~~----~~ 243 (590)
..++..+..+++|++|++++|.+.+.....+ +..+++|+.|++++|.+.+.. ..
T Consensus 155 -------------------~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 215 (319)
T cd00116 155 -------------------EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAE 215 (319)
T ss_pred -------------------HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHH
Confidence 0122334455566677776666653322222 123346666666666655321 22
Q ss_pred CCCCCCcccEEEccCCcCCCCCchhhhhc----CCCCcEEEccCceecc----cCCcccCCCCCCcEEEccCcccc
Q 007762 244 PIHSHKRLRLLDISNNNFRGHIPVEIGDV----LPGLFSLNISMNALDG----SIPSSFGNMKFLQLLDVTNNQLT 311 (590)
Q Consensus 244 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~----~~~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~l~~n~~~ 311 (590)
.+..+++|+.|++++|.+++.....+... .+.|++|++++|.++. .+...+..++.|+++++++|.+.
T Consensus 216 ~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 216 TLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred HhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 34455667777777766654233333222 2466666666665541 22233344455666666666555
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.62 E-value=7.6e-18 Score=138.59 Aligned_cols=166 Identities=29% Similarity=0.460 Sum_probs=119.7
Q ss_pred CccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEE
Q 007762 345 NLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQIL 424 (590)
Q Consensus 345 ~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L 424 (590)
.+.+++.|.+++|+++ .+|..+..+.+|+.|++++|+++ .+|..++.++.|+.|+++-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4566777778888887 56666778888888888888887 66777888888888888888776 678888888888888
Q ss_pred EcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCccc
Q 007762 425 DISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLE 504 (590)
Q Consensus 425 ~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 504 (590)
|+.+|.+.+. .+| +.|..++.|+-|+++.|.+. .+|..++.+.+|+.|.+..|.+.
T Consensus 108 dltynnl~e~----------------------~lp-gnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll 163 (264)
T KOG0617|consen 108 DLTYNNLNEN----------------------SLP-GNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL 163 (264)
T ss_pred hccccccccc----------------------cCC-cchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh
Confidence 8888877631 122 22555666777777777776 66666777777777777777766
Q ss_pred CCCcccccCCCCCCEEECcCCccCCCCccccccCC
Q 007762 505 GEVPVQLCKLNQLQLLDLSNNNLHGPIPPCFDNTT 539 (590)
Q Consensus 505 ~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 539 (590)
.+|..++.+..|+.|.+.+|+++ .+|+.+.++.
T Consensus 164 -~lpkeig~lt~lrelhiqgnrl~-vlppel~~l~ 196 (264)
T KOG0617|consen 164 -SLPKEIGDLTRLRELHIQGNRLT-VLPPELANLD 196 (264)
T ss_pred -hCcHHHHHHHHHHHHhcccceee-ecChhhhhhh
Confidence 66777777777777777777776 5666666554
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.52 E-value=3.3e-16 Score=129.04 Aligned_cols=155 Identities=29% Similarity=0.490 Sum_probs=75.7
Q ss_pred CCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcE
Q 007762 248 HKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEY 327 (590)
Q Consensus 248 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~ 327 (590)
+..++.|.+++|+++ .+|..+.. +.+|+.|++++|+++ .+|..++.+++|++|+++.|++. .+|..+. .++.|+.
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~-l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfg-s~p~lev 106 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAE-LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFG-SFPALEV 106 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHH-hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccC-CCchhhh
Confidence 344455555555554 44444444 445555555555554 44445555555555555555444 4444433 2444444
Q ss_pred EEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcC
Q 007762 328 LALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHL 407 (590)
Q Consensus 328 L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~ 407 (590)
|++..|++... .+|..|..++.|+.|++++|.+. .+|..++++++|+.|.+.+|.+
T Consensus 107 ldltynnl~e~-----------------------~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 107 LDLTYNNLNEN-----------------------SLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred hhccccccccc-----------------------cCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch
Confidence 44444444321 23444444444444555555444 4444455555555555555554
Q ss_pred cCCCCcccCCCCCCcEEEcccCcCC
Q 007762 408 EGPIPVEFCQLDWLQILDISDNNIS 432 (590)
Q Consensus 408 ~~~~~~~~~~l~~L~~L~l~~n~l~ 432 (590)
. .+|..++.+++|+.|.+.+|+++
T Consensus 163 l-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 163 L-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred h-hCcHHHHHHHHHHHHhcccceee
Confidence 4 34555555555555555555554
No 23
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.12 E-value=2.4e-12 Score=125.97 Aligned_cols=169 Identities=30% Similarity=0.391 Sum_probs=83.2
Q ss_pred EEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCc
Q 007762 327 YLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNH 406 (590)
Q Consensus 327 ~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 406 (590)
..+++.|++.. +|..+..+-.|+.+.++.|.+. .+|..+.++..|+.++++.|+++ ..|..+..++ |+.|.+++|+
T Consensus 79 ~aDlsrNR~~e-lp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNk 154 (722)
T KOG0532|consen 79 FADLSRNRFSE-LPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNK 154 (722)
T ss_pred hhhcccccccc-CchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCc
Confidence 34455554442 3444444445555555555544 44444445555555555555544 3333333332 4445555554
Q ss_pred CcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCcccc
Q 007762 407 LEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDW 486 (590)
Q Consensus 407 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~ 486 (590)
++ .+|..++....|..||.+.|.+. .++.. +.++.+|+.|.++.|++. .+|..
T Consensus 155 l~-~lp~~ig~~~tl~~ld~s~nei~------------------------slpsq-l~~l~slr~l~vrRn~l~-~lp~E 207 (722)
T KOG0532|consen 155 LT-SLPEEIGLLPTLAHLDVSKNEIQ------------------------SLPSQ-LGYLTSLRDLNVRRNHLE-DLPEE 207 (722)
T ss_pred cc-cCCcccccchhHHHhhhhhhhhh------------------------hchHH-hhhHHHHHHHHHhhhhhh-hCCHH
Confidence 44 34444444444555555555444 33333 455555555555555555 33333
Q ss_pred ccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccC
Q 007762 487 VDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLH 528 (590)
Q Consensus 487 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 528 (590)
+..+ .|..||++.|+++ .+|..|..|..|++|-|.+|+++
T Consensus 208 l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 208 LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 4432 3555555555555 55555555555555555555555
No 24
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=2e-12 Score=119.36 Aligned_cols=91 Identities=29% Similarity=0.351 Sum_probs=40.5
Q ss_pred CCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecc---cccccCCc-------cccCCCCCcEEEcccccccccc
Q 007762 45 MPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNN---DLRGSLPW-------CMANMTSLRILYVSSNQLTGSI 114 (590)
Q Consensus 45 l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n---~i~~~~~~-------~~~~l~~L~~L~ls~n~l~~~~ 114 (590)
+..+++++|++|.+.....+.....+.+.+.|+.-++++- +....+|+ ++..+++|++||||+|.+.-..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 4445555555555544333333344444445555555442 11112222 2334455666666665543111
Q ss_pred CC---CCccCCCCCcEEECcCCcc
Q 007762 115 SS---SPLVHLTSIEELHLSNNHF 135 (590)
Q Consensus 115 ~~---~~l~~l~~L~~L~ls~n~~ 135 (590)
+. ..+.+++.|++|.+.+|-+
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Gl 132 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGL 132 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCC
Confidence 11 0134455566666655544
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.10 E-value=1.9e-12 Score=126.56 Aligned_cols=171 Identities=27% Similarity=0.402 Sum_probs=131.9
Q ss_pred CEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCcc
Q 007762 374 EGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNM 453 (590)
Q Consensus 374 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 453 (590)
...+++.|++. .+|..+..+..|+.+.|..|.+. .+|..++++..|++++++.|+++ ..|.-+...-|+.|.+++|+
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpLkvli~sNNk 154 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPLKVLIVSNNK 154 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcceeEEEecCc
Confidence 34566666665 55666666667777777777766 56777777777777777777776 33333334457777888888
Q ss_pred CCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCccCCCCcc
Q 007762 454 LHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLHGPIPP 533 (590)
Q Consensus 454 ~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~ 533 (590)
+ +.+|.. +...+.|..||.+.|++. .+|..++.+.+|+.|++..|++. .+|+.++.|+ |..||++.|+++ .||-
T Consensus 155 l-~~lp~~-ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv 228 (722)
T KOG0532|consen 155 L-TSLPEE-IGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPV 228 (722)
T ss_pred c-ccCCcc-cccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecch
Confidence 7 467776 668899999999999998 67777999999999999999998 6788888665 899999999999 7999
Q ss_pred ccccCCccccccCCCCCCCc
Q 007762 534 CFDNTTLHESYSNSSSPNKQ 553 (590)
Q Consensus 534 ~~~~l~~~~~~~~~~~~~~~ 553 (590)
+|..++.+...-...+|...
T Consensus 229 ~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hhhhhhhheeeeeccCCCCC
Confidence 99999877777777776544
No 26
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.10 E-value=9.9e-11 Score=101.61 Aligned_cols=103 Identities=28% Similarity=0.311 Sum_probs=35.7
Q ss_pred CCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCc-cccccccCCCCEE
Q 007762 418 LDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSI-SDWVDGLSQLSHL 496 (590)
Q Consensus 418 l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~-~~~~~~l~~L~~L 496 (590)
+.+|+.|++++|.++ .+++.-.++.|+.|++++|.++ .+.......+++|+.|++++|+|...- -..+..+++|++|
T Consensus 41 l~~L~~L~Ls~N~I~-~l~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L 118 (175)
T PF14580_consen 41 LDKLEVLDLSNNQIT-KLEGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVL 118 (175)
T ss_dssp -TT--EEE-TTS--S---TT----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EE
T ss_pred hcCCCEEECCCCCCc-cccCccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCccee
Confidence 344444444444444 2222222334444444444442 333321234677777777777776421 1345667777777
Q ss_pred ECcCCcccCCC---cccccCCCCCCEEEC
Q 007762 497 ILGHNNLEGEV---PVQLCKLNQLQLLDL 522 (590)
Q Consensus 497 ~L~~n~l~~~~---~~~~~~l~~L~~L~l 522 (590)
++.+|+++... ...+..+|+|+.||-
T Consensus 119 ~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 119 SLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp E-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred eccCCcccchhhHHHHHHHHcChhheeCC
Confidence 77777776331 123566777777654
No 27
>PLN03150 hypothetical protein; Provisional
Probab=99.09 E-value=1.5e-10 Score=123.11 Aligned_cols=94 Identities=27% Similarity=0.472 Sum_probs=86.3
Q ss_pred cccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEEC
Q 007762 443 SIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDL 522 (590)
Q Consensus 443 ~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 522 (590)
.++.|+|++|.+.+.+|.. +..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~-i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPND-ISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHH-HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEEC
Confidence 3778899999998888877 888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCCcccccc
Q 007762 523 SNNNLHGPIPPCFDN 537 (590)
Q Consensus 523 ~~n~l~~~~p~~~~~ 537 (590)
++|+++|.+|..+..
T Consensus 498 s~N~l~g~iP~~l~~ 512 (623)
T PLN03150 498 NGNSLSGRVPAALGG 512 (623)
T ss_pred cCCcccccCChHHhh
Confidence 999999999988765
No 28
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.09 E-value=9e-12 Score=115.06 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=83.0
Q ss_pred CCCCCCEEEccCCccccc----CccccCCCCCccEEECCCCcCcCCC----CcccCCCCCCcEEEcccCcCCCCCCCCCC
Q 007762 369 KCFVLEGLFLNNNSLSGM----IPRWLGNLTRLQHIMMPKNHLEGPI----PVEFCQLDWLQILDISDNNISGSLPSCFH 440 (590)
Q Consensus 369 ~~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~L~~n~~~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 440 (590)
.-+.|+.+...+|++... +...|...+.|+.+.+..|.+.... ...|..+++|+.||+.+|.++....
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs---- 230 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGS---- 230 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHH----
Confidence 345666676666665532 2234555666777777666655322 2345666777777777776652111
Q ss_pred CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccc-----cccCCCCEEECcCCcccCC----Ccccc
Q 007762 441 PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWV-----DGLSQLSHLILGHNNLEGE----VPVQL 511 (590)
Q Consensus 441 ~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~----~~~~~ 511 (590)
.....++..+++|+.|++++|.+...-...| ...++|++|.+.+|.++.. +...+
T Consensus 231 ----------------~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~ 294 (382)
T KOG1909|consen 231 ----------------VALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACM 294 (382)
T ss_pred ----------------HHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHH
Confidence 1112235556778888888887765433222 3367888888888887733 22334
Q ss_pred cCCCCCCEEECcCCcc
Q 007762 512 CKLNQLQLLDLSNNNL 527 (590)
Q Consensus 512 ~~l~~L~~L~l~~n~l 527 (590)
...|.|+.|+|++|.+
T Consensus 295 ~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 295 AEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcchhhHHhcCCcccc
Confidence 5577888888888888
No 29
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=8.2e-11 Score=102.11 Aligned_cols=137 Identities=22% Similarity=0.363 Sum_probs=50.4
Q ss_pred cccccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeeccc
Q 007762 6 VNGVLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNND 85 (590)
Q Consensus 6 ~~~~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~ 85 (590)
.+.++| -+.+..+++.|+|++++| . .+ +.+...+.+|+.|++++|.+.. + +.+..+++|++|++++|.
T Consensus 8 ~i~~~~--~~~n~~~~~~L~L~~n~I--~-~I-e~L~~~l~~L~~L~Ls~N~I~~----l--~~l~~L~~L~~L~L~~N~ 75 (175)
T PF14580_consen 8 MIEQIA--QYNNPVKLRELNLRGNQI--S-TI-ENLGATLDKLEVLDLSNNQITK----L--EGLPGLPRLKTLDLSNNR 75 (175)
T ss_dssp ----------------------------------S--TT-TT--EEE-TTS--S--------TT----TT--EEE--SS-
T ss_pred cccccc--cccccccccccccccccc--c-cc-cchhhhhcCCCEEECCCCCCcc----c--cCccChhhhhhcccCCCC
Confidence 445566 367777889999999965 2 22 3344357789999999999864 4 368888999999999999
Q ss_pred ccccCCccc-cCCCCCcEEEccccccccccCC-CCccCCCCCcEEECcCCccccccC--ccccccCCCccEEEcc
Q 007762 86 LRGSLPWCM-ANMTSLRILYVSSNQLTGSISS-SPLVHLTSIEELHLSNNHFQIPIS--LEPLFNHSRLKVFWAK 156 (590)
Q Consensus 86 i~~~~~~~~-~~l~~L~~L~ls~n~l~~~~~~-~~l~~l~~L~~L~ls~n~~~~~~~--~~~l~~l~~L~~l~l~ 156 (590)
|+. +...+ ..+++|++|++++|+|. .+.. ..+..+++|++|++.+|+++.... ...+..+++|+.|+-.
T Consensus 76 I~~-i~~~l~~~lp~L~~L~L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 76 ISS-ISEGLDKNLPNLQELYLSNNKIS-DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --S--CHHHHHH-TT--EEE-TTS----SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CCc-cccchHHhCCcCCEEECcCCcCC-ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 984 44444 46899999999999887 3332 246778999999999998874322 1345678888887643
No 30
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.06 E-value=2.4e-11 Score=109.74 Aligned_cols=199 Identities=20% Similarity=0.185 Sum_probs=123.6
Q ss_pred CCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccC-CcccccCccccCCCCCccEE
Q 007762 322 CVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNN-NSLSGMIPRWLGNLTRLQHI 400 (590)
Q Consensus 322 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~-n~~~~~~~~~~~~l~~L~~L 400 (590)
+.+|+.+.++.|.-.. +......-|.|+++...+..+. ..|. +--...+....... .-.+|.....+..+..|+++
T Consensus 213 f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Ltel 289 (490)
T KOG1259|consen 213 FRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSALVSADTWQELTEL 289 (490)
T ss_pred hhhhheeeeeccchhh-eeceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCceEEecchHhhhhhc
Confidence 5678888888775332 1111223466777777655443 1111 11111121111111 11223333445566778888
Q ss_pred ECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCC
Q 007762 401 MMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLN 480 (590)
Q Consensus 401 ~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~ 480 (590)
||++|.+. .+.++..-.+.++.|++++|.+.. +.....+++|+.||+++|.++ .+... -..+-+.+.|.|+.|.+.
T Consensus 290 DLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~nLa~L~~L~~LDLS~N~Ls-~~~Gw-h~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 290 DLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQNLAELPQLQLLDLSGNLLA-ECVGW-HLKLGNIKTLKLAQNKIE 365 (490)
T ss_pred cccccchh-hhhhhhhhccceeEEeccccceee-ehhhhhcccceEeecccchhH-hhhhh-HhhhcCEeeeehhhhhHh
Confidence 88888877 556667777888888888888873 333444778888888888874 33322 344567888888888876
Q ss_pred CCccccccccCCCCEEECcCCcccCCC-cccccCCCCCCEEECcCCccCC
Q 007762 481 GSISDWVDGLSQLSHLILGHNNLEGEV-PVQLCKLNQLQLLDLSNNNLHG 529 (590)
Q Consensus 481 ~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~ 529 (590)
+. ..++.+-+|..||+++|+|.... -..++++|.|+.+.+.+||+.+
T Consensus 366 ~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 366 TL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 33 34677778888888888887322 2457888888888888888884
No 31
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=3.1e-11 Score=108.96 Aligned_cols=133 Identities=25% Similarity=0.319 Sum_probs=95.6
Q ss_pred cCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEE
Q 007762 368 SKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHV 447 (590)
Q Consensus 368 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L 447 (590)
.....|+.+++++|.++ .+.+++.-.+.++.|+++.|.+.. .+.+..+++|+.||+++|.++........+.+++.|
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--VQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTL 357 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--ehhhhhcccceEeecccchhHhhhhhHhhhcCEeee
Confidence 33456777777777776 444556667777777887777763 233667778888888888776444333346678888
Q ss_pred ECcCccCCCCCCccccccCCCCcEEEcCCCcCCCC-ccccccccCCCCEEECcCCcccCC
Q 007762 448 HLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGS-ISDWVDGLSQLSHLILGHNNLEGE 506 (590)
Q Consensus 448 ~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~ 506 (590)
.+++|.+. . ..+ +..+.+|..||+++|+|... -...+++++.|+.+.|.+|++.+.
T Consensus 358 ~La~N~iE-~-LSG-L~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 358 KLAQNKIE-T-LSG-LRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred ehhhhhHh-h-hhh-hHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 88888772 2 222 77788999999999999852 335689999999999999999844
No 32
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=2.6e-11 Score=115.21 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=50.0
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccc--cCCccccCCCCCcEEEccccccccccCCCCccC
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRG--SLPWCMANMTSLRILYVSSNQLTGSISSSPLVH 121 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~ 121 (590)
.+.+|+...|.++.+...+.+ +....|++++.||||.|-+.. ........+|+|+.|+++.|.+........-..
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~---~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIE---EYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hHHhhhheeecCccccccchh---hhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 345555666666555431111 344555666666666654432 111222345566666666665542222212223
Q ss_pred CCCCcEEECcCCccccccCccccccCCCccEEEccCC
Q 007762 122 LTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNN 158 (590)
Q Consensus 122 l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~ 158 (590)
+++|+.|.++.|.++-..-...+..++.|+.|++.+|
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N 232 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEAN 232 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcc
Confidence 4555555555554431111122234444444444444
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.05 E-value=1.9e-10 Score=117.04 Aligned_cols=194 Identities=33% Similarity=0.386 Sum_probs=102.0
Q ss_pred EEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCcc-ccCceeccCccccccCCccccCCCCCCEEEccC
Q 007762 302 LLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLT-NLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNN 380 (590)
Q Consensus 302 ~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~ 380 (590)
.++...+.+...+... . ....++.+++.+|.+.. ++....... +|+.|++++|.+. .++..+..++.|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~~-~-~~~~l~~L~l~~n~i~~-i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISEL-L-ELTNLTSLDLDNNNITD-IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhh-h-cccceeEEecCCccccc-Cccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 5666666663232222 2 24667778888777765 333333443 7777777777776 4444566777777777777
Q ss_pred CcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCc
Q 007762 381 NSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKR 460 (590)
Q Consensus 381 n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 460 (590)
|++. .++......+.|+.|++++|++. .+|........|+++.+++|.+...+........+..+.+.+|++. .++.
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccc
Confidence 7776 33333335667777777777766 4444444445566666666643322222223334444444444431 1111
Q ss_pred cccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccC
Q 007762 461 GTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEG 505 (590)
Q Consensus 461 ~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 505 (590)
. +..+++++.|++++|.++...+ +..+.+++.|++++|.++.
T Consensus 250 ~-~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 250 S-IGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred h-hccccccceecccccccccccc--ccccCccCEEeccCccccc
Confidence 1 3344444444444444442221 4444444444444444443
No 34
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.03 E-value=5.3e-10 Score=113.82 Aligned_cols=152 Identities=35% Similarity=0.471 Sum_probs=64.6
Q ss_pred CCCcEEEccCceecccCCcccCCCC-CCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCce
Q 007762 274 PGLFSLNISMNALDGSIPSSFGNMK-FLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWL 352 (590)
Q Consensus 274 ~~L~~L~L~~n~~~~~~~~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 352 (590)
+.++.+++.++.++ .++......+ +|+.|++++|++. .++.... .+++|+.|+++.|++... +......++|+.|
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~-~l~~L~~L~l~~N~l~~l-~~~~~~~~~L~~L 191 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLR-NLPNLKNLDLSFNDLSDL-PKLLSNLSNLNNL 191 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhh-ccccccccccCCchhhhh-hhhhhhhhhhhhe
Confidence 34444444444444 3333333332 4444444444444 3322222 244444444444444431 1111134444444
Q ss_pred eccCccccccCCccccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCC
Q 007762 353 QLEGNHFVGEIPQSLSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNIS 432 (590)
Q Consensus 353 ~l~~~~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~ 432 (590)
++++|++. .+|........|+.+.+++|.+. ..+..+..+.++..+.+.+|++. ..+..+..+++++.|++++|.++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 55544444 33332223333555555554322 22333444445555555555444 22344444555555555555554
No 35
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=6.1e-11 Score=112.71 Aligned_cols=211 Identities=21% Similarity=0.186 Sum_probs=133.5
Q ss_pred hcCCCCcEEEccCCCCCCCCc-CCCCCCCcccEEEccCCcCCCCC-chhhhhcCCCCcEEEccCceecccCCcc-cCCCC
Q 007762 222 ENNTNLESLFLVNDSLAGPFR-LPIHSHKRLRLLDISNNNFRGHI-PVEIGDVLPGLFSLNISMNALDGSIPSS-FGNMK 298 (590)
Q Consensus 222 ~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~~L~~L~L~~n~~~~~~~~~-l~~l~ 298 (590)
.++.+|+++.+.++.+..... .-...|++++.||++.|-+.... ...+...+|+|+.|+++.|.+.....+. -..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 466788888888887664321 23567889999999998665322 2345566889999999988876211111 12457
Q ss_pred CCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccC-CccccCCCCCCEEE
Q 007762 299 FLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEI-PQSLSKCFVLEGLF 377 (590)
Q Consensus 299 ~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~l~~~~~L~~L~ 377 (590)
+|+.|.++.|.++..--..+...+|+|+.|++..|...........-+..|++|++++|.+.... ....+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 78888888888774333333445888888888888533222333344677888888888776332 14456777888888
Q ss_pred ccCCcccccC-ccc-----cCCCCCccEEECCCCcCcCC-CCcccCCCCCCcEEEcccCcCC
Q 007762 378 LNNNSLSGMI-PRW-----LGNLTRLQHIMMPKNHLEGP-IPVEFCQLDWLQILDISDNNIS 432 (590)
Q Consensus 378 l~~n~~~~~~-~~~-----~~~l~~L~~L~L~~n~~~~~-~~~~~~~l~~L~~L~l~~n~l~ 432 (590)
++.|.+...- |+. ....++|+.|++..|++... ....+..+++|+.|.+..|.++
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 8888776432 111 24466777777777776421 1123444566666666666665
No 36
>PLN03150 hypothetical protein; Provisional
Probab=98.93 E-value=2.4e-09 Score=114.03 Aligned_cols=112 Identities=32% Similarity=0.458 Sum_probs=75.1
Q ss_pred ccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCC
Q 007762 397 LQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSY 476 (590)
Q Consensus 397 L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~ 476 (590)
++.|+|++|.+.+.+|..+..+++|+.|++++|.+. +.+|.. +..+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~-----------------------g~iP~~-~~~l~~L~~LdLs~ 475 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIR-----------------------GNIPPS-LGSITSLEVLDLSY 475 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCccc-----------------------CcCChH-HhCCCCCCEEECCC
Confidence 455555555555555555555555555555555554 555554 66777788888888
Q ss_pred CcCCCCccccccccCCCCEEECcCCcccCCCcccccCC-CCCCEEECcCCccCCCCc
Q 007762 477 NRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKL-NQLQLLDLSNNNLHGPIP 532 (590)
Q Consensus 477 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~p 532 (590)
|.+++.+|..++.+++|++|+|++|++++.+|..+..+ .++..+++.+|+.....|
T Consensus 476 N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 476 NSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 88887778878888888888888888887787777653 356677777776554444
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=9.9e-10 Score=78.26 Aligned_cols=61 Identities=43% Similarity=0.518 Sum_probs=42.4
Q ss_pred CCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECcCCcc
Q 007762 467 HSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNL 527 (590)
Q Consensus 467 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 527 (590)
|+|+.|++++|+++...+.+|.++++|++|++++|+++...|..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3567777777777755556677777777777777777755556677777777777777764
No 38
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.87 E-value=1.2e-09 Score=118.69 Aligned_cols=289 Identities=22% Similarity=0.237 Sum_probs=149.3
Q ss_pred CcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCC--CCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCc
Q 007762 200 HDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDS--LAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLF 277 (590)
Q Consensus 200 ~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~--~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~ 277 (590)
...+.+.+-++.+. .++.. ..+++|++|-+..+. +.......|..++.|+.||+++|.-.+.+|..+.. +-+|+
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~Lr 598 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHLR 598 (889)
T ss_pred hheeEEEEeccchh-hccCC--CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhhh
Confidence 45566666666554 33332 356677777777775 44444445667788888888877554577777776 67888
Q ss_pred EEEccCceecccCCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCC--CccCccccCccccCceecc
Q 007762 278 SLNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLE--GHMFSRNFNLTNLKWLQLE 355 (590)
Q Consensus 278 ~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~--~~~~~~~~~l~~L~~L~l~ 355 (590)
+|++++..+. .+|.++++++.|.+|++..+.....++.. ...+.+|++|.+...... ......+..+..|+.+.+.
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i-~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGI-LLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccch-hhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 8888887777 77778888888888887776654334333 334777777777654321 1112222334444444443
Q ss_pred CccccccCCccccCCCCCC----EEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCC------CCCCcEEE
Q 007762 356 GNHFVGEIPQSLSKCFVLE----GLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQ------LDWLQILD 425 (590)
Q Consensus 356 ~~~~~~~~~~~l~~~~~L~----~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~------l~~L~~L~ 425 (590)
.... .+-..+...+.|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......... ++++..+.
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~ 753 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVS 753 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHH
Confidence 2221 0001112222222 2222222222 23345566677777777777665322212111 22333333
Q ss_pred cccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCC-ccccccccCCCCEEEC
Q 007762 426 ISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGS-ISDWVDGLSQLSHLIL 498 (590)
Q Consensus 426 l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~-~~~~~~~l~~L~~L~L 498 (590)
+.+|...........+++|+.|.+..|.....+.+. ...+..+..+.+..+.+.+. .-...++++++..+.+
T Consensus 754 ~~~~~~~r~l~~~~f~~~L~~l~l~~~~~~e~~i~~-~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l 826 (889)
T KOG4658|consen 754 ILNCHMLRDLTWLLFAPHLTSLSLVSCRLLEDIIPK-LKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPL 826 (889)
T ss_pred hhccccccccchhhccCcccEEEEecccccccCCCH-HHHhhhcccEEecccccccceeeecCCCCceeEeccc
Confidence 333333222222223667777777777664444433 44444455444555544433 2233333444443333
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=4.2e-09 Score=75.02 Aligned_cols=61 Identities=38% Similarity=0.444 Sum_probs=53.1
Q ss_pred CcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcc
Q 007762 442 LSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNL 503 (590)
Q Consensus 442 ~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 503 (590)
++|++|++++|.+ ..++...|.++++|++|++++|.++...+..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l-~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKL-TEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTE-SEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCC-CccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4577788888877 477877799999999999999999988888999999999999999975
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.72 E-value=1.8e-09 Score=110.06 Aligned_cols=226 Identities=27% Similarity=0.274 Sum_probs=118.0
Q ss_pred cCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCC
Q 007762 294 FGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVL 373 (590)
Q Consensus 294 l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L 373 (590)
+..+++|+.+++.+|.+. .+.... ..+++|++|++++|.|.... .+..++.|+.|++.+|.+... ..+..++.|
T Consensus 91 l~~~~~l~~l~l~~n~i~-~i~~~l-~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L 164 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIE-KIENLL-SSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSL 164 (414)
T ss_pred cccccceeeeeccccchh-hcccch-hhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhh
Confidence 334444445555554444 222211 12445555555555554321 223344455555555555422 223335556
Q ss_pred CEEEccCCcccccCc-cccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCc--ccEEECc
Q 007762 374 EGLFLNNNSLSGMIP-RWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLS--IEHVHLS 450 (590)
Q Consensus 374 ~~L~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~--L~~L~l~ 450 (590)
+.+++++|.+...-+ . ...+.+++.+.+.+|.+.. ...+..+..+..+++..|.++. ..+...... |+.++++
T Consensus 165 ~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~-~~~l~~~~~~~L~~l~l~ 240 (414)
T KOG0531|consen 165 KLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISK-LEGLNELVMLHLRELYLS 240 (414)
T ss_pred hcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhccccccee-ccCcccchhHHHHHHhcc
Confidence 666666665553322 1 3555666666666666542 2223333444444666666552 222222222 6677777
Q ss_pred CccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCC---Cccc-ccCCCCCCEEECcCCc
Q 007762 451 KNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGE---VPVQ-LCKLNQLQLLDLSNNN 526 (590)
Q Consensus 451 ~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~---~~~~-~~~l~~L~~L~l~~n~ 526 (590)
+|.+. .++.. +..+..+..|++++|.+... ..+.....+..+....|++... .... ....+.+..+.+.+|+
T Consensus 241 ~n~i~-~~~~~-~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (414)
T KOG0531|consen 241 GNRIS-RSPEG-LENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNP 316 (414)
T ss_pred cCccc-ccccc-ccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCc
Confidence 77663 33222 56667788888888877643 2244556667777777766522 1121 4566778888888888
Q ss_pred cCCCCcc
Q 007762 527 LHGPIPP 533 (590)
Q Consensus 527 l~~~~p~ 533 (590)
+....+.
T Consensus 317 ~~~~~~~ 323 (414)
T KOG0531|consen 317 IRKISSL 323 (414)
T ss_pred ccccccc
Confidence 8765553
No 41
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.71 E-value=1.6e-08 Score=110.18 Aligned_cols=271 Identities=23% Similarity=0.251 Sum_probs=155.6
Q ss_pred CCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCc--CCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCc
Q 007762 224 NTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNN--FRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQ 301 (590)
Q Consensus 224 l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~--l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~ 301 (590)
....+...+-++.+...... ..+++|++|-+..|. +. .++..++..++.|+.||+++|.--+.+|..++.+-+|+
T Consensus 522 ~~~~rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred hhheeEEEEeccchhhccCC--CCCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 34556666666655442222 244578888888875 44 66666666688888888888766568888888888888
Q ss_pred EEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCcccc--ccCCccccCCCCCCEEEcc
Q 007762 302 LLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFV--GEIPQSLSKCFVLEGLFLN 379 (590)
Q Consensus 302 ~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~--~~~~~~l~~~~~L~~L~l~ 379 (590)
+|++++..+. .+|..+. .+..|.+|++..+.-....+.....+.+|++|.+...... ...-..+..+..|+.+...
T Consensus 599 yL~L~~t~I~-~LP~~l~-~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLG-NLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred cccccCCCcc-ccchHHH-HHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheee
Confidence 8888888887 7887776 4778888888877654444555556788888877654311 1111233344444444443
Q ss_pred CCcccccCccccCCCCCcc----EEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCC-------CCcccEEE
Q 007762 380 NNSLSGMIPRWLGNLTRLQ----HIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFH-------PLSIEHVH 448 (590)
Q Consensus 380 ~n~~~~~~~~~~~~l~~L~----~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-------~~~L~~L~ 448 (590)
.... .+...+..+++|. .+.+.++... ..+..+..+.+|+.|.+.+|.+.+....... ++++..+.
T Consensus 677 ~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~ 753 (889)
T KOG4658|consen 677 ISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVS 753 (889)
T ss_pred cchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHH
Confidence 3322 1112223333333 3332222222 3455677788888888888887643332211 22333333
Q ss_pred CcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCccc
Q 007762 449 LSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLE 504 (590)
Q Consensus 449 l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 504 (590)
..+|.....+.+ ..-.++|+.|.+..+...+.+......+..++.+.+..+.+.
T Consensus 754 ~~~~~~~r~l~~--~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 754 ILNCHMLRDLTW--LLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred hhccccccccch--hhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 344433222211 123467888888777665544444444555554444444444
No 42
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=3.8e-10 Score=102.02 Aligned_cols=182 Identities=20% Similarity=0.119 Sum_probs=88.2
Q ss_pred CCcEEEeecccccc-cCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCc-cccccCccccccCCCccE
Q 007762 75 HLQELYIYNNDLRG-SLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNH-FQIPISLEPLFNHSRLKV 152 (590)
Q Consensus 75 ~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~-~~~~~~~~~l~~l~~L~~ 152 (590)
.||+|||++..|+. .+-..++.|.+|+.|.+-++.+.+.+.. .+.+-.+|+.|+++.+. ++.....-.+..|+.|..
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~-~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVN-TIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHH-HHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 36677777666653 2223445666677776666666544444 45556667777776654 221111224456677777
Q ss_pred EEccCCcccccccCCCCCCCCCcccceEeccCCCC---CCCcCChhccCCCcccEEEcCCCcCccccchHHhhcCCCCcE
Q 007762 153 FWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYG---DGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWLLENNTNLES 229 (590)
Q Consensus 153 l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~---~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~ 229 (590)
|+++.|....+..... .......++.|++ +++. ....+..-...+++|..||++++..........+..++.|++
T Consensus 265 LNlsWc~l~~~~Vtv~-V~hise~l~~LNl-sG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~ 342 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVA-VAHISETLTQLNL-SGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQH 342 (419)
T ss_pred cCchHhhccchhhhHH-Hhhhchhhhhhhh-hhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchhee
Confidence 7777665543331110 0111124444444 1111 001122223456666666666653222222223345666666
Q ss_pred EEccCCCCCC-CCcCCCCCCCcccEEEccCC
Q 007762 230 LFLVNDSLAG-PFRLPIHSHKRLRLLDISNN 259 (590)
Q Consensus 230 L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~n 259 (590)
|.++.|.... .....+...|.|.+|++.++
T Consensus 343 lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 343 LSLSRCYDIIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eehhhhcCCChHHeeeeccCcceEEEEeccc
Confidence 6666553221 11123445555666665554
No 43
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=1.1e-09 Score=99.16 Aligned_cols=179 Identities=22% Similarity=0.178 Sum_probs=113.0
Q ss_pred cccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCC-cCCCCCchhhhhcCCCCcEE
Q 007762 201 DLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNN-NFRGHIPVEIGDVLPGLFSL 279 (590)
Q Consensus 201 ~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~~~~~L~~L 279 (590)
.|+.+|++...++..-...++..|.+|+.|.+.++.+.+.+...+++...|+.|+++.+ .++......+...++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 58889999988876667777889999999999999999888778888899999999987 45533334455568888899
Q ss_pred EccCceecccCCc-ccCC-CCCCcEEEccCccc--ccccchhhhcCCCCCcEEEccCCc-CCCccCccccCccccCceec
Q 007762 280 NISMNALDGSIPS-SFGN-MKFLQLLDVTNNQL--TGEIPEHLAVGCVNLEYLALSNNS-LEGHMFSRNFNLTNLKWLQL 354 (590)
Q Consensus 280 ~L~~n~~~~~~~~-~l~~-l~~L~~L~l~~n~~--~~~~~~~~~~~~~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~l 354 (590)
+++.|.+...... .+.. -++|+.|++++..- ...--..+...+++|.+||++.|. +.......|..++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 9988876532211 1111 24677777776531 111112333457777777777663 22222333445566666666
Q ss_pred cCccccccCCc---cccCCCCCCEEEccCC
Q 007762 355 EGNHFVGEIPQ---SLSKCFVLEGLFLNNN 381 (590)
Q Consensus 355 ~~~~~~~~~~~---~l~~~~~L~~L~l~~n 381 (590)
+.|.. ..|. .+...++|.+|++.+|
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 66543 2232 2233445555555444
No 44
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.54 E-value=8.1e-09 Score=105.25 Aligned_cols=245 Identities=22% Similarity=0.229 Sum_probs=103.3
Q ss_pred cCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCcccCCCCCCcE
Q 007762 223 NNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPSSFGNMKFLQL 302 (590)
Q Consensus 223 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~ 302 (590)
.+..++.+.+..+.+.. +...+..+.+|+.+++.+|.+. .+...+. .+++|+.|++++|.++.. ..+..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~-~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLS-SLVNLQVLDLSFNKITKL--EGLSTLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchh-hhhcchheeccccccccc--cchhhccchhh
Confidence 34444555555554443 1122344555555555555554 2222111 144555555555555421 12344444555
Q ss_pred EEccCcccccccchhhhcCCCCCcEEEccCCcCCCccC-ccccCccccCceeccCccccccCCccccCCCCCCEEEccCC
Q 007762 303 LDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMF-SRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNN 381 (590)
Q Consensus 303 L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n 381 (590)
|++.+|.+. .+.... .+..|+.+++++|.+..... . ...+.+++.+.+.+|.+... ..+..+..+..+++..|
T Consensus 145 L~l~~N~i~-~~~~~~--~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 145 LNLSGNLIS-DISGLE--SLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDN 218 (414)
T ss_pred heeccCcch-hccCCc--cchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccc
Confidence 555555554 332221 14445555555554443222 1 23344444444444444311 11222233333344444
Q ss_pred cccccCccccCCCCC--ccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCC
Q 007762 382 SLSGMIPRWLGNLTR--LQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLK 459 (590)
Q Consensus 382 ~~~~~~~~~~~~l~~--L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~ 459 (590)
.+...- .+..+.. |+.+++++|++. ..+..+..+.+ +..+++.++.+...-
T Consensus 219 ~i~~~~--~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~-----------------------l~~l~~~~n~~~~~~- 271 (414)
T KOG0531|consen 219 KISKLE--GLNELVMLHLRELYLSGNRIS-RSPEGLENLKN-----------------------LPVLDLSSNRISNLE- 271 (414)
T ss_pred cceecc--CcccchhHHHHHHhcccCccc-ccccccccccc-----------------------ccccchhhccccccc-
Confidence 433211 1111122 444444444443 11123334444 444444444432111
Q ss_pred ccccccCCCCcEEEcCCCcCCC---Ccccc-ccccCCCCEEECcCCcccCCC
Q 007762 460 RGTFFNYHSLVTLDLSYNRLNG---SISDW-VDGLSQLSHLILGHNNLEGEV 507 (590)
Q Consensus 460 ~~~~~~~~~L~~L~ls~n~l~~---~~~~~-~~~l~~L~~L~L~~n~l~~~~ 507 (590)
.+...+.+..+....+.+.. ..... ....+.++...+.+|.+....
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 272 --GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred --cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 13334455555555555442 11111 344566777777777666443
No 45
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.35 E-value=8.3e-08 Score=101.98 Aligned_cols=162 Identities=22% Similarity=0.294 Sum_probs=112.8
Q ss_pred CCCcEEecCCCCCCCCCCCCCccccc-CCCCCcEEEeecccccc-cCCccccCCCCCcEEEccccccccccCCCCccCCC
Q 007762 46 PSLKYLSLSDSTLGTNSSKILDRGLC-SLVHLQELYIYNNDLRG-SLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLT 123 (590)
Q Consensus 46 ~~L~~L~L~~~~~~~~~~~~~~~~l~-~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~ 123 (590)
.+|++|++++...-. .-.+..++ -+|.|+.|.+++-.+.. .+.....++|+|..||+|+++++ .+. .+++++
T Consensus 122 ~nL~~LdI~G~~~~s---~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~-nl~--GIS~Lk 195 (699)
T KOG3665|consen 122 QNLQHLDISGSELFS---NGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS-NLS--GISRLK 195 (699)
T ss_pred HhhhhcCccccchhh---ccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc-CcH--HHhccc
Confidence 578888888865322 22222333 38888998888865542 23344457889999999999887 553 488899
Q ss_pred CCcEEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCccc
Q 007762 124 SIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLE 203 (590)
Q Consensus 124 ~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~ 203 (590)
+|+.|.+.+-.+........+.++++|+.|+++........ .+... .-+.-..+|+||
T Consensus 196 nLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~-----------~ii~q-----------Ylec~~~LpeLr 253 (699)
T KOG3665|consen 196 NLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDT-----------KIIEQ-----------YLECGMVLPELR 253 (699)
T ss_pred cHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccccch-----------HHHHH-----------HHHhcccCcccc
Confidence 99999888877765556677888999999998876543221 01111 112233478999
Q ss_pred EEEcCCCcCccccchHHhhcCCCCcEEEccCC
Q 007762 204 YVDLSHMKMNGEFPTWLLENNTNLESLFLVND 235 (590)
Q Consensus 204 ~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~ 235 (590)
.||.|+..+.+.+.+.+....++|+.+..-++
T Consensus 254 fLDcSgTdi~~~~le~ll~sH~~L~~i~~~~~ 285 (699)
T KOG3665|consen 254 FLDCSGTDINEEILEELLNSHPNLQQIAALDC 285 (699)
T ss_pred EEecCCcchhHHHHHHHHHhCccHhhhhhhhh
Confidence 99999999988888888888888888766543
No 46
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.28 E-value=1.8e-08 Score=95.70 Aligned_cols=286 Identities=17% Similarity=0.078 Sum_probs=138.7
Q ss_pred CCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccc-cCCCCCcEEEeecc-cccccCCc-ccc
Q 007762 19 KSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGL-CSLVHLQELYIYNN-DLRGSLPW-CMA 95 (590)
Q Consensus 19 ~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l-~~l~~L~~L~L~~n-~i~~~~~~-~~~ 95 (590)
..|+.|.++|++ .....--..+...++++++|++.+|...+ ...-..+ ..+++|++|++..| .+++..-. ...
T Consensus 138 g~lk~LSlrG~r-~v~~sslrt~~~~CpnIehL~l~gc~~iT---d~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~ 213 (483)
T KOG4341|consen 138 GFLKELSLRGCR-AVGDSSLRTFASNCPNIEHLALYGCKKIT---DSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAE 213 (483)
T ss_pred cccccccccccc-cCCcchhhHHhhhCCchhhhhhhcceecc---HHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHH
Confidence 478888899884 22223334455578999999998887322 1111223 34788999999885 34432222 334
Q ss_pred CCCCCcEEEccccc-cccccCCCCccCCCCCcEEECcCCccccccC-ccccccCCCccEEEccCCcccccccCCCCCCCC
Q 007762 96 NMTSLRILYVSSNQ-LTGSISSSPLVHLTSIEELHLSNNHFQIPIS-LEPLFNHSRLKVFWAKNNEINAEITQSPSLTAP 173 (590)
Q Consensus 96 ~l~~L~~L~ls~n~-l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~-~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~ 173 (590)
.|++|++|+++.|. |++.--....+++.+++.+...+|.-.+... ...-+.+..+..+++..|....+..
T Consensus 214 gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~-------- 285 (483)
T KOG4341|consen 214 GCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDED-------- 285 (483)
T ss_pred hhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchH--------
Confidence 78899999998885 3321111134566777777666664211100 0112334445555544442111100
Q ss_pred CcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCc-CccccchHHhhcCCCCcEEEccCCCCCC-CCcCC-CCCCCc
Q 007762 174 NFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMK-MNGEFPTWLLENNTNLESLFLVNDSLAG-PFRLP-IHSHKR 250 (590)
Q Consensus 174 ~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~-~~~~~~~~~~~~l~~L~~L~l~~~~~~~-~~~~~-~~~~~~ 250 (590)
+...-..+..|+.++.+++. +++..-..+..++++|+.+.+..|+.-+ .-... -.+++.
T Consensus 286 ------------------~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~ 347 (483)
T KOG4341|consen 286 ------------------LWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPH 347 (483)
T ss_pred ------------------HHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChh
Confidence 01111234455555555543 2222233333455566666665554211 11111 123455
Q ss_pred ccEEEccCCcCC-CCCchhhhhcCCCCcEEEccCceec-cc----CCcccCCCCCCcEEEccCcccccccchhhhcCCCC
Q 007762 251 LRLLDISNNNFR-GHIPVEIGDVLPGLFSLNISMNALD-GS----IPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVN 324 (590)
Q Consensus 251 L~~L~l~~n~l~-~~~~~~~~~~~~~L~~L~L~~n~~~-~~----~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~ 324 (590)
|+.+++..+... +.--......++.|+.+.++.|... +. +...-..+..|..+.++++....+-.-.....+++
T Consensus 348 Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~ 427 (483)
T KOG4341|consen 348 LERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRN 427 (483)
T ss_pred hhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcc
Confidence 666666555321 1101122233556666666655432 11 11222334556666666665332222222234667
Q ss_pred CcEEEccCCc
Q 007762 325 LEYLALSNNS 334 (590)
Q Consensus 325 L~~L~l~~n~ 334 (590)
|+.+++-.+.
T Consensus 428 Leri~l~~~q 437 (483)
T KOG4341|consen 428 LERIELIDCQ 437 (483)
T ss_pred cceeeeechh
Confidence 7777766654
No 47
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.27 E-value=1.6e-08 Score=96.00 Aligned_cols=233 Identities=18% Similarity=0.121 Sum_probs=110.5
Q ss_pred CCCcccEEEcCCC-cCccccchHHhhcCCCCcEEEccCCCCCCC--CcCCCCCCCcccEEEccCCc-CCCCCchhhhhcC
Q 007762 198 HQHDLEYVDLSHM-KMNGEFPTWLLENNTNLESLFLVNDSLAGP--FRLPIHSHKRLRLLDISNNN-FRGHIPVEIGDVL 273 (590)
Q Consensus 198 ~~~~L~~L~ls~~-~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~--~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~ 273 (590)
.+++|+.|++..| .++....+.+...|++|++|++++|..... +......+..++.+...+|. ...+.-......+
T Consensus 188 ~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~ 267 (483)
T KOG4341|consen 188 YCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYC 267 (483)
T ss_pred hcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccC
Confidence 4556666666653 344444444455666666666666642221 11112334445555444432 1111111122223
Q ss_pred CCCcEEEccCce-eccc-CCcccCCCCCCcEEEccCcc-cccccchhhhcCCCCCcEEEccCCcC-CCccCccc-cCccc
Q 007762 274 PGLFSLNISMNA-LDGS-IPSSFGNMKFLQLLDVTNNQ-LTGEIPEHLAVGCVNLEYLALSNNSL-EGHMFSRN-FNLTN 348 (590)
Q Consensus 274 ~~L~~L~L~~n~-~~~~-~~~~l~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~~L~~L~l~~n~i-~~~~~~~~-~~l~~ 348 (590)
..+.++++..|. +++. +...-..+..|++++.+++. +++..-..+...+++|+.+.+..|+- +..-...+ .+++.
T Consensus 268 ~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~ 347 (483)
T KOG4341|consen 268 LEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPH 347 (483)
T ss_pred hHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChh
Confidence 345555554442 2211 11112334556666665543 22223334445566677776666642 21111111 23566
Q ss_pred cCceeccCcccccc--CCccccCCCCCCEEEccCCcccccC-----ccccCCCCCccEEECCCCcCcC-CCCcccCCCCC
Q 007762 349 LKWLQLEGNHFVGE--IPQSLSKCFVLEGLFLNNNSLSGMI-----PRWLGNLTRLQHIMMPKNHLEG-PIPVEFCQLDW 420 (590)
Q Consensus 349 L~~L~l~~~~~~~~--~~~~l~~~~~L~~L~l~~n~~~~~~-----~~~~~~l~~L~~L~L~~n~~~~-~~~~~~~~l~~ 420 (590)
|+.+++.++..... +...-.+|+.|+.+.++.|...... ...-..+..|..+.|++++... ..-+.+..+++
T Consensus 348 Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~ 427 (483)
T KOG4341|consen 348 LERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRN 427 (483)
T ss_pred hhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcc
Confidence 66666666543211 1222346677777777766532111 1223445667777777776432 22234556677
Q ss_pred CcEEEcccCc
Q 007762 421 LQILDISDNN 430 (590)
Q Consensus 421 L~~L~l~~n~ 430 (590)
|+.+++-+|+
T Consensus 428 Leri~l~~~q 437 (483)
T KOG4341|consen 428 LERIELIDCQ 437 (483)
T ss_pred cceeeeechh
Confidence 7777777665
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.26 E-value=1.3e-07 Score=85.90 Aligned_cols=205 Identities=18% Similarity=0.203 Sum_probs=103.0
Q ss_pred CCCCcEEEeecccccc--cCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCc
Q 007762 73 LVHLQELYIYNNDLRG--SLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRL 150 (590)
Q Consensus 73 l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L 150 (590)
+..++.+||.+|.|++ ++...+.++|.|++|+++.|.+...|.. .-....+|+.|-+.+..+.-......+..++++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~-lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKS-LPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCcccc-CcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 4456666666666553 2333445566666666666655432222 112344566665555544322222344555566
Q ss_pred cEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCcc--ccchHHhhcCCCCc
Q 007762 151 KVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNG--EFPTWLLENNTNLE 228 (590)
Q Consensus 151 ~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~--~~~~~~~~~l~~L~ 228 (590)
+.++++.|.+. .+.+ ..+..... -+.++++.+..|.... +... +..-+|++.
T Consensus 149 telHmS~N~~r-----------------q~n~-Dd~c~e~~-------s~~v~tlh~~~c~~~~w~~~~~-l~r~Fpnv~ 202 (418)
T KOG2982|consen 149 TELHMSDNSLR-----------------QLNL-DDNCIEDW-------STEVLTLHQLPCLEQLWLNKNK-LSRIFPNVN 202 (418)
T ss_pred hhhhhccchhh-----------------hhcc-cccccccc-------chhhhhhhcCCcHHHHHHHHHh-HHhhcccch
Confidence 66666555322 2222 11111111 1234444444442210 1111 123467888
Q ss_pred EEEccCCCCCCCC-cCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcEEEccCceecccCCc------ccCCCCCCc
Q 007762 229 SLFLVNDSLAGPF-RLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFSLNISMNALDGSIPS------SFGNMKFLQ 301 (590)
Q Consensus 229 ~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~------~l~~l~~L~ 301 (590)
.+.+-.|.+.... ......+|.+..|+++.+++.....-.-.+.++.|..|.++++++...+.. .++.+++++
T Consensus 203 sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~ 282 (418)
T KOG2982|consen 203 SVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQ 282 (418)
T ss_pred heeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceE
Confidence 8888777665532 234556677778888888776333322334478888888888877633222 234455555
Q ss_pred EEE
Q 007762 302 LLD 304 (590)
Q Consensus 302 ~L~ 304 (590)
.|+
T Consensus 283 vLN 285 (418)
T KOG2982|consen 283 VLN 285 (418)
T ss_pred Eec
Confidence 554
No 49
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.25 E-value=2e-08 Score=101.67 Aligned_cols=159 Identities=27% Similarity=0.261 Sum_probs=85.7
Q ss_pred CccccCccccCceeccCccccccCC-----ccccCC--------------------------CCCCEEEccCCcccccCc
Q 007762 340 FSRNFNLTNLKWLQLEGNHFVGEIP-----QSLSKC--------------------------FVLEGLFLNNNSLSGMIP 388 (590)
Q Consensus 340 ~~~~~~l~~L~~L~l~~~~~~~~~~-----~~l~~~--------------------------~~L~~L~l~~n~~~~~~~ 388 (590)
|..+..+.+|+.|.++++.+..... ..+.++ -.|...+++.|.+. ...
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 5556678899999999998763100 000000 12344455555554 333
Q ss_pred cccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCC
Q 007762 389 RWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHS 468 (590)
Q Consensus 389 ~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~ 468 (590)
.++.-++.|++|+|++|++... +.+..++.|++|||++|.+.-..........|..|.+++|.++. + .+ +.++.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~l~t-L-~g-ie~Lks 255 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNALTT-L-RG-IENLKS 255 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhhheeeeecccHHHh-h-hh-HHhhhh
Confidence 4555566677777777766532 25556667777777777665333222223346666666665521 1 11 445556
Q ss_pred CcEEEcCCCcCCCCcc-ccccccCCCCEEECcCCccc
Q 007762 469 LVTLDLSYNRLNGSIS-DWVDGLSQLSHLILGHNNLE 504 (590)
Q Consensus 469 L~~L~ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~ 504 (590)
|+.||+++|-+.+.-. ..+..+..|++|+|.||++-
T Consensus 256 L~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 256 LYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 6666666665543110 11334555666666666654
No 50
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=7.5e-07 Score=81.09 Aligned_cols=83 Identities=22% Similarity=0.269 Sum_probs=51.8
Q ss_pred CCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCC-ccccccccCCCCEEECcCCcccCCCcc------cccC
Q 007762 441 PLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGS-ISDWVDGLSQLSHLILGHNNLEGEVPV------QLCK 513 (590)
Q Consensus 441 ~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~------~~~~ 513 (590)
++++..+.+-.|++........+..++.+..|+|+.++|... ..+.+.+++.|..|-++++++.+.+.. .++.
T Consensus 198 Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaR 277 (418)
T KOG2982|consen 198 FPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIAR 277 (418)
T ss_pred cccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEee
Confidence 455666666666654443333355566777788888887642 234567788888888888877754321 2466
Q ss_pred CCCCCEEECc
Q 007762 514 LNQLQLLDLS 523 (590)
Q Consensus 514 l~~L~~L~l~ 523 (590)
+++++.|+=+
T Consensus 278 L~~v~vLNGs 287 (418)
T KOG2982|consen 278 LTKVQVLNGS 287 (418)
T ss_pred ccceEEecCc
Confidence 6777776543
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.17 E-value=2.4e-07 Score=83.15 Aligned_cols=163 Identities=24% Similarity=0.278 Sum_probs=95.9
Q ss_pred ccCCCcccEEEcCCCcCccccchHHhhcCC---CCcEEEccCCCCCC-----------CCcCCCCCCCcccEEEccCCcC
Q 007762 196 LYHQHDLEYVDLSHMKMNGEFPTWLLENNT---NLESLFLVNDSLAG-----------PFRLPIHSHKRLRLLDISNNNF 261 (590)
Q Consensus 196 l~~~~~L~~L~ls~~~~~~~~~~~~~~~l~---~L~~L~l~~~~~~~-----------~~~~~~~~~~~L~~L~l~~n~l 261 (590)
+..+..++.+++|+|.+..+...++..... +|+..+++.- +++ ....++.+||+|+.+++++|.+
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAf 104 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeecccccc
Confidence 445788999999999998777777654444 5555555543 122 1123466889999999999988
Q ss_pred CCCCchhhhh---cCCCCcEEEccCceecccCCcc-------------cCCCCCCcEEEccCcccccccchh----hhcC
Q 007762 262 RGHIPVEIGD---VLPGLFSLNISMNALDGSIPSS-------------FGNMKFLQLLDVTNNQLTGEIPEH----LAVG 321 (590)
Q Consensus 262 ~~~~~~~~~~---~~~~L~~L~L~~n~~~~~~~~~-------------l~~l~~L~~L~l~~n~~~~~~~~~----~~~~ 321 (590)
....|..+.. .-+.|++|.+++|.+....-.. ...-|.|+++.+..|++. ..+.. .+..
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle-ngs~~~~a~~l~s 183 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE-NGSKELSAALLES 183 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc-cCcHHHHHHHHHh
Confidence 7677665433 2467889999888765221111 123366777777777665 33321 1222
Q ss_pred CCCCcEEEccCCcCCCcc-----CccccCccccCceeccCcccc
Q 007762 322 CVNLEYLALSNNSLEGHM-----FSRNFNLTNLKWLQLEGNHFV 360 (590)
Q Consensus 322 ~~~L~~L~l~~n~i~~~~-----~~~~~~l~~L~~L~l~~~~~~ 360 (590)
-.+|+.+.+..|.|.... ...+..+.+|+.|++.+|.++
T Consensus 184 h~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 184 HENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred hcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 246666666666654221 111223445555555555443
No 52
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.16 E-value=2.7e-07 Score=82.80 Aligned_cols=218 Identities=19% Similarity=0.188 Sum_probs=102.2
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccc---cccCC-------ccccCCCCCcEEEccccccccc
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDL---RGSLP-------WCMANMTSLRILYVSSNQLTGS 113 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i---~~~~~-------~~~~~l~~L~~L~ls~n~l~~~ 113 (590)
.+..+..++|++|.|+....+.....+.+-.+|+..+++.-.. .+.++ .++-+||+|+..++|+|.+...
T Consensus 28 ~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 28 MMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 3556666666666665533333334444555566666654211 11222 2344567777777777766533
Q ss_pred cCCC---CccCCCCCcEEECcCCccccccCccc-------------cccCCCccEEEccCCcccccccCCCCCCCCCccc
Q 007762 114 ISSS---PLVHLTSIEELHLSNNHFQIPISLEP-------------LFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQL 177 (590)
Q Consensus 114 ~~~~---~l~~l~~L~~L~ls~n~~~~~~~~~~-------------l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L 177 (590)
.+.. .+.+-+.|.+|.+++|-+. ++.-.. .+.-+.|+++.+..|++......
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~----------- 175 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKE----------- 175 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHH-----------
Confidence 3321 2344566777777666542 222111 12345566665555544211000
Q ss_pred ceEeccCCCCCCCcCChhccCCCcccEEEcCCCcCccccchHH----hhcCCCCcEEEccCCCCCCCC----cCCCCCCC
Q 007762 178 SRLSLSSGYGDGVIFPKFLYHQHDLEYVDLSHMKMNGEFPTWL----LENNTNLESLFLVNDSLAGPF----RLPIHSHK 249 (590)
Q Consensus 178 ~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~~----~~~l~~L~~L~l~~~~~~~~~----~~~~~~~~ 249 (590)
.....+..-..|+++.+..|.+..+....+ +..+.+|+.|++..|.++... ..++...+
T Consensus 176 -------------~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~ 242 (388)
T COG5238 176 -------------LSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWN 242 (388)
T ss_pred -------------HHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccc
Confidence 011122233456666666665543322111 124555666666655544321 12233444
Q ss_pred cccEEEccCCcCCCCCchhhhhc-----CCCCcEEEccCcee
Q 007762 250 RLRLLDISNNNFRGHIPVEIGDV-----LPGLFSLNISMNAL 286 (590)
Q Consensus 250 ~L~~L~l~~n~l~~~~~~~~~~~-----~~~L~~L~L~~n~~ 286 (590)
.|+.|.+.+|-++......+... .|+|..|...+|..
T Consensus 243 ~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~ 284 (388)
T COG5238 243 LLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNER 284 (388)
T ss_pred hhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhh
Confidence 56666666665544433333221 34555555555543
No 53
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.12 E-value=5.9e-08 Score=98.42 Aligned_cols=128 Identities=28% Similarity=0.429 Sum_probs=91.3
Q ss_pred CCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCc-cccCCC
Q 007762 20 SLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPW-CMANMT 98 (590)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~-~~~~l~ 98 (590)
.|.+.++++|++ ......+. -++.|+.|+|+.|+++. . ..+..|++|++|||++|.+. .+|. ....|.
T Consensus 165 ~L~~a~fsyN~L---~~mD~SLq-ll~ale~LnLshNk~~~----v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~ 233 (1096)
T KOG1859|consen 165 KLATASFSYNRL---VLMDESLQ-LLPALESLNLSHNKFTK----V--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK 233 (1096)
T ss_pred hHhhhhcchhhH---HhHHHHHH-HHHHhhhhccchhhhhh----h--HHHHhcccccccccccchhc-cccccchhhhh
Confidence 466667777744 22333343 56788888888888754 3 36788888888888888887 4443 222344
Q ss_pred CCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEccCCcccc
Q 007762 99 SLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINA 162 (590)
Q Consensus 99 ~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~ 162 (590)
|+.|.+++|.++ ++-. +.++++|+.||+++|-+.+-.....+..+..|+.|++.+|++..
T Consensus 234 -L~~L~lrnN~l~-tL~g--ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 234 -LQLLNLRNNALT-TLRG--IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred -heeeeecccHHH-hhhh--HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 888888888877 5554 78888888888888877765556677778888888888887643
No 54
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=98.09 E-value=9.9e-06 Score=67.93 Aligned_cols=128 Identities=23% Similarity=0.314 Sum_probs=76.0
Q ss_pred ccCCCCCCCCCCCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccc
Q 007762 9 VLRGQGFPHFKSLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRG 88 (590)
Q Consensus 9 ~i~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~ 88 (590)
+|+..+|.++++|+.+.+... + ..+....++.+++|+.+.+..+ +. .+...+|..+++++.+.+.+ .+..
T Consensus 2 ~i~~~~F~~~~~l~~i~~~~~-~---~~I~~~~F~~~~~l~~i~~~~~-~~----~i~~~~F~~~~~l~~i~~~~-~~~~ 71 (129)
T PF13306_consen 2 SIGNNAFYNCSNLESITFPNT-I---KKIGENAFSNCTSLKSINFPNN-LT----SIGDNAFSNCKSLESITFPN-NLKS 71 (129)
T ss_dssp EE-TTTTTT-TT--EEEETST------EE-TTTTTT-TT-SEEEESST-TS----CE-TTTTTT-TT-EEEEETS-TT-E
T ss_pred EECHHHHhCCCCCCEEEECCC-e---eEeChhhccccccccccccccc-cc----ccceeeeecccccccccccc-cccc
Confidence 578899999999999999853 2 4566666658889999999886 43 47778899998999999976 4444
Q ss_pred cCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCcc
Q 007762 89 SLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLK 151 (590)
Q Consensus 89 ~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~ 151 (590)
....+|..+++|+.+++..+ +. .++...+.++ +|+.+.+..+ +. .++...|.++++|+
T Consensus 72 i~~~~F~~~~~l~~i~~~~~-~~-~i~~~~f~~~-~l~~i~~~~~-~~-~i~~~~F~~~~~l~ 129 (129)
T PF13306_consen 72 IGDNAFSNCTNLKNIDIPSN-IT-EIGSSSFSNC-NLKEINIPSN-IT-KIEENAFKNCTKLK 129 (129)
T ss_dssp E-TTTTTT-TTECEEEETTT--B-EEHTTTTTT--T--EEE-TTB--S-S----GGG------
T ss_pred cccccccccccccccccCcc-cc-EEchhhhcCC-CceEEEECCC-cc-EECCccccccccCC
Confidence 55678888999999999875 54 6777678887 9999998763 22 34556677776664
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.05 E-value=3.5e-06 Score=54.65 Aligned_cols=36 Identities=36% Similarity=0.603 Sum_probs=19.0
Q ss_pred CCCEEECcCCcccCCCcccccCCCCCCEEECcCCccC
Q 007762 492 QLSHLILGHNNLEGEVPVQLCKLNQLQLLDLSNNNLH 528 (590)
Q Consensus 492 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 528 (590)
+|++|++++|+++ .+|..+.+|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 34444555555555555555555
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.93 E-value=1e-05 Score=52.53 Aligned_cols=37 Identities=30% Similarity=0.440 Sum_probs=29.3
Q ss_pred CCCcEEEcCCCcCCCCccccccccCCCCEEECcCCccc
Q 007762 467 HSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLE 504 (590)
Q Consensus 467 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 504 (590)
++|++|++++|+|+ .+|..++++++|++|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46888999999998 45666888999999999999887
No 57
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.88 E-value=4.9e-07 Score=72.62 Aligned_cols=85 Identities=22% Similarity=0.354 Sum_probs=54.2
Q ss_pred ccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEECc
Q 007762 444 IEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDLS 523 (590)
Q Consensus 444 L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 523 (590)
|+.+++++|.+ ..+|...-..++.++.|++++|.+. .+|+.+..++.|+.|+++.|++. ..|..+..+.++-.|+..
T Consensus 55 l~~i~ls~N~f-k~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 55 LTKISLSDNGF-KKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred EEEEecccchh-hhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 33344444444 2444442344556777777777777 55666777777777777777777 456666667777777777
Q ss_pred CCccCCCCc
Q 007762 524 NNNLHGPIP 532 (590)
Q Consensus 524 ~n~l~~~~p 532 (590)
+|.+. .+|
T Consensus 132 ~na~~-eid 139 (177)
T KOG4579|consen 132 ENARA-EID 139 (177)
T ss_pred CCccc-cCc
Confidence 77776 444
No 58
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.88 E-value=3e-05 Score=66.96 Aligned_cols=130 Identities=19% Similarity=0.252 Sum_probs=89.7
Q ss_pred CCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCccccCCCC
Q 007762 20 SLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPWCMANMTS 99 (590)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 99 (590)
+=+.+++.+.++ ...+.+..-......+||++|.+.. + ..|..++.|.+|.|.+|+|+...|.--..+++
T Consensus 20 ~e~e~~LR~lki----p~ienlg~~~d~~d~iDLtdNdl~~----l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~ 89 (233)
T KOG1644|consen 20 RERELDLRGLKI----PVIENLGATLDQFDAIDLTDNDLRK----L--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPN 89 (233)
T ss_pred cccccccccccc----cchhhccccccccceecccccchhh----c--ccCCCccccceEEecCCcceeeccchhhhccc
Confidence 345667776644 1222233234567788999988743 3 46888888999999999998766666667788
Q ss_pred CcEEEccccccccccCCCCccCCCCCcEEECcCCccccc--cCccccccCCCccEEEccCCc
Q 007762 100 LRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIP--ISLEPLFNHSRLKVFWAKNNE 159 (590)
Q Consensus 100 L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~--~~~~~l~~l~~L~~l~l~~~~ 159 (590)
|+.|.+.+|.|..--....+..|++|++|.+-+|.+... .-..++..+++|++|++.+-.
T Consensus 90 l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 90 LKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred cceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 999999998876222222467788999999888876532 123456778888888887654
No 59
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.84 E-value=1.6e-06 Score=69.71 Aligned_cols=112 Identities=23% Similarity=0.359 Sum_probs=52.0
Q ss_pred cccEEEcCCCcCccccchHH--hhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCCCCchhhhhcCCCCcE
Q 007762 201 DLEYVDLSHMKMNGEFPTWL--LENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRGHIPVEIGDVLPGLFS 278 (590)
Q Consensus 201 ~L~~L~ls~~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~ 278 (590)
.+..+++++|.+. .+++.. +.....|...++++|.+....+..-..++.++.+++++|.+. .+|..+.. ++.|+.
T Consensus 28 E~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa-m~aLr~ 104 (177)
T KOG4579|consen 28 ELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAA-MPALRS 104 (177)
T ss_pred Hhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhh-hHHhhh
Confidence 3455667777654 333322 122334444455555544433332233444555555555554 44544333 455555
Q ss_pred EEccCceecccCCcccCCCCCCcEEEccCcccccccchh
Q 007762 279 LNISMNALDGSIPSSFGNMKFLQLLDVTNNQLTGEIPEH 317 (590)
Q Consensus 279 L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~ 317 (590)
++++.|++. ..|..+..+.++-.|+..+|... +++..
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~d 141 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVD 141 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHH
Confidence 555555544 34444444444444555444444 44433
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.82 E-value=7.4e-05 Score=73.46 Aligned_cols=136 Identities=18% Similarity=0.254 Sum_probs=91.4
Q ss_pred ccCCCCCCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCCcEEEcccC-cCCCCCCCCCCCCccc
Q 007762 367 LSKCFVLEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWLQILDISDN-NISGSLPSCFHPLSIE 445 (590)
Q Consensus 367 l~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~L~ 445 (590)
+..|..++.|++++|.++ .+|. -..+|++|.+++|.-...+|..+ .++|++|++++| .+. .+ +.+|+
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sL-----P~sLe 115 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GL-----PESVR 115 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cc-----ccccc
Confidence 445788999999999887 4452 23579999999876545667655 358999999998 443 23 35688
Q ss_pred EEECcCccCC--CCCCccccccCCCCcEEEcCCCc-CC-CCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEE
Q 007762 446 HVHLSKNMLH--GQLKRGTFFNYHSLVTLDLSYNR-LN-GSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLD 521 (590)
Q Consensus 446 ~L~l~~n~~~--~~~~~~~~~~~~~L~~L~ls~n~-l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 521 (590)
.|+++++... +.+| ++|+.|.+.+++ .. ..+|..+. ++|++|++++|+.. ..|..+. .+|+.|+
T Consensus 116 ~L~L~~n~~~~L~~LP-------ssLk~L~I~~~n~~~~~~lp~~LP--sSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ 183 (426)
T PRK15386 116 SLEIKGSATDSIKNVP-------NGLTSLSINSYNPENQARIDNLIS--PSLKTLSLTGCSNI-ILPEKLP--ESLQSIT 183 (426)
T ss_pred eEEeCCCCCcccccCc-------chHhheeccccccccccccccccC--CcccEEEecCCCcc-cCccccc--ccCcEEE
Confidence 8888766542 2233 357888885433 11 12222222 68999999999876 4554443 5899999
Q ss_pred CcCCc
Q 007762 522 LSNNN 526 (590)
Q Consensus 522 l~~n~ 526 (590)
++.|.
T Consensus 184 ls~n~ 188 (426)
T PRK15386 184 LHIEQ 188 (426)
T ss_pred ecccc
Confidence 98773
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.78 E-value=0.0001 Score=72.46 Aligned_cols=54 Identities=17% Similarity=0.085 Sum_probs=30.1
Q ss_pred CCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCCCCEEEccCC
Q 007762 322 CVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFVLEGLFLNNN 381 (590)
Q Consensus 322 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~L~~L~l~~n 381 (590)
+.+++.|++++|.+... |. -..+|++|.+++|.-...+|..+ .++|+.|++++|
T Consensus 51 ~~~l~~L~Is~c~L~sL-P~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 51 ARASGRLYIKDCDIESL-PV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred hcCCCEEEeCCCCCccc-CC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 56677777777765542 31 12356777776654433444433 245666666665
No 62
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.67 E-value=7.4e-05 Score=64.65 Aligned_cols=132 Identities=22% Similarity=0.292 Sum_probs=97.3
Q ss_pred CcEEecCCCCCCCCCCCCCcccccC-CCCCcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCCc
Q 007762 48 LKYLSLSDSTLGTNSSKILDRGLCS-LVHLQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIE 126 (590)
Q Consensus 48 L~~L~L~~~~~~~~~~~~~~~~l~~-l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~ 126 (590)
=+.++|++.++.. + +.++. +.....+||++|.+.. -..|..+++|.+|.+.+|.|+ .|....-..+++|+
T Consensus 21 e~e~~LR~lkip~----i--enlg~~~d~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~ 91 (233)
T KOG1644|consen 21 ERELDLRGLKIPV----I--ENLGATLDQFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLK 91 (233)
T ss_pred ccccccccccccc----h--hhccccccccceecccccchhh--cccCCCccccceEEecCCcce-eeccchhhhccccc
Confidence 5677777776643 2 11222 3457889999998873 335778999999999999999 77663445578899
Q ss_pred EEECcCCccccccCccccccCCCccEEEccCCcccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCCCcccEEE
Q 007762 127 ELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNEINAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQHDLEYVD 206 (590)
Q Consensus 127 ~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 206 (590)
.|.+.+|.+..-.....+..|++|+.|.+-+|++....... ...+..+++|+.||
T Consensus 92 ~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR-------------------------~yvl~klp~l~~LD 146 (233)
T KOG1644|consen 92 TLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYR-------------------------LYVLYKLPSLRTLD 146 (233)
T ss_pred eEEecCcchhhhhhcchhccCCccceeeecCCchhcccCce-------------------------eEEEEecCcceEee
Confidence 99999999987777788999999999999888765432111 12355678999999
Q ss_pred cCCCcCc
Q 007762 207 LSHMKMN 213 (590)
Q Consensus 207 ls~~~~~ 213 (590)
+....-.
T Consensus 147 F~kVt~~ 153 (233)
T KOG1644|consen 147 FQKVTRK 153 (233)
T ss_pred hhhhhHH
Confidence 9876543
No 63
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.52 E-value=4.1e-05 Score=81.85 Aligned_cols=128 Identities=21% Similarity=0.207 Sum_probs=69.0
Q ss_pred CCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCCCCCCCcccEEEccCCcCCC-CCchhhhhcCCCC
Q 007762 198 HQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLPIHSHKRLRLLDISNNNFRG-HIPVEIGDVLPGL 276 (590)
Q Consensus 198 ~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~~~~~L 276 (590)
.+|.|++|.+++-.+.......++.++|+|..|+++++.++.. ..+.++++|+.|.+.+-.+.. ..-..++. +++|
T Consensus 146 ~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~-L~~L 222 (699)
T KOG3665|consen 146 MLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFN-LKKL 222 (699)
T ss_pred hCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhc-ccCC
Confidence 3567777777776554333344456677777777777766653 335566677777666665542 11123344 6677
Q ss_pred cEEEccCceeccc------CCcccCCCCCCcEEEccCcccccccchhhhcCCCCCcEE
Q 007762 277 FSLNISMNALDGS------IPSSFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYL 328 (590)
Q Consensus 277 ~~L~L~~n~~~~~------~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L 328 (590)
+.||+|....... ..+.-..+|+|+.||.++..+...+-+.....-++|+.+
T Consensus 223 ~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i 280 (699)
T KOG3665|consen 223 RVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQI 280 (699)
T ss_pred CeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhh
Confidence 7777766543311 111122356666666666655544443333333444443
No 64
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.49 E-value=0.00036 Score=58.37 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=45.0
Q ss_pred ccCCCCCCcEEEccCcccccccchhhhcCCCCCcEEEccCCcCCCccCccccCccccCceeccCccccccCCccccCCCC
Q 007762 293 SFGNMKFLQLLDVTNNQLTGEIPEHLAVGCVNLEYLALSNNSLEGHMFSRNFNLTNLKWLQLEGNHFVGEIPQSLSKCFV 372 (590)
Q Consensus 293 ~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~~~ 372 (590)
.|.++++|+.+.+.. .+. .++...+..+.+|+.+.+..+ +.......|..+++++.+.+.+ .+.......|..+++
T Consensus 7 ~F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~ 82 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTN 82 (129)
T ss_dssp TTTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TT
T ss_pred HHhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccc
Confidence 344555555555543 233 444454555555555555543 4333344455555555555543 222223344555666
Q ss_pred CCEEEccCCcccccCccccCCCCCccEEECCCCcCcCCCCcccCCCCCC
Q 007762 373 LEGLFLNNNSLSGMIPRWLGNLTRLQHIMMPKNHLEGPIPVEFCQLDWL 421 (590)
Q Consensus 373 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~l~~L 421 (590)
++.+.+..+ +.......|.++ .++.+.+.. .+.......|.++++|
T Consensus 83 l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 83 LKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp ECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 666665443 333333445555 666666554 2232334455555544
No 65
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=6.3e-06 Score=74.50 Aligned_cols=80 Identities=26% Similarity=0.353 Sum_probs=38.8
Q ss_pred CcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCCCCcEEECcCCccccccCccccccCCCccEEEc
Q 007762 76 LQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLTSIEELHLSNNHFQIPISLEPLFNHSRLKVFWA 155 (590)
Q Consensus 76 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l 155 (590)
.+.|++.+|.+++ .....+++.|+.|.||=|+|+ .+.. +..|++|++|+|..|.|..-..+..+.++++|++||+
T Consensus 21 vkKLNcwg~~L~D--Isic~kMp~lEVLsLSvNkIs-sL~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL 95 (388)
T KOG2123|consen 21 VKKLNCWGCGLDD--ISICEKMPLLEVLSLSVNKIS-SLAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWL 95 (388)
T ss_pred hhhhcccCCCccH--HHHHHhcccceeEEeeccccc-cchh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhh
Confidence 3444444444442 112234455555555555554 3332 4555555555555555543223344556666666666
Q ss_pred cCCcc
Q 007762 156 KNNEI 160 (590)
Q Consensus 156 ~~~~~ 160 (590)
..|+.
T Consensus 96 ~ENPC 100 (388)
T KOG2123|consen 96 DENPC 100 (388)
T ss_pred ccCCc
Confidence 66543
No 66
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.16 E-value=4.8e-05 Score=79.94 Aligned_cols=63 Identities=24% Similarity=0.140 Sum_probs=27.8
Q ss_pred CCCCCcEEEeeccc-ccccCCcccc-CCCCCcEEEccccc-cccccCCCCccCCCCCcEEECcCCc
Q 007762 72 SLVHLQELYIYNND-LRGSLPWCMA-NMTSLRILYVSSNQ-LTGSISSSPLVHLTSIEELHLSNNH 134 (590)
Q Consensus 72 ~l~~L~~L~L~~n~-i~~~~~~~~~-~l~~L~~L~ls~n~-l~~~~~~~~l~~l~~L~~L~ls~n~ 134 (590)
.+++|+.|+++++. +++..-.++. .|++|++|.+.+|. ++..--......+++|++|++++|.
T Consensus 241 ~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 241 ICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred hcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCc
Confidence 34555555555555 3332222222 25555555554444 3311111123344555555555554
No 67
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.15 E-value=4.4e-05 Score=80.24 Aligned_cols=14 Identities=29% Similarity=0.226 Sum_probs=7.3
Q ss_pred cCCCCEEECcCCcc
Q 007762 490 LSQLSHLILGHNNL 503 (590)
Q Consensus 490 l~~L~~L~L~~n~l 503 (590)
+..++.+++.++..
T Consensus 426 ~~~~~~l~~~~~~~ 439 (482)
T KOG1947|consen 426 CSNLKDLDLSGCRV 439 (482)
T ss_pred hhccccCCccCccc
Confidence 44555555555543
No 68
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.03 E-value=0.00026 Score=64.13 Aligned_cols=86 Identities=26% Similarity=0.402 Sum_probs=58.6
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecc--cccccCCccccCCCCCcEEEccccccccccCC-CCcc
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNN--DLRGSLPWCMANMTSLRILYVSSNQLTGSISS-SPLV 120 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n--~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~-~~l~ 120 (590)
.+..|+.|++.+..++. + ..|..+++|++|.++.| .+.+.++.....+|+|++|++++|+|. .+.. ..+.
T Consensus 41 ~~~~le~ls~~n~gltt----~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~-~lstl~pl~ 113 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTT----L--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK-DLSTLRPLK 113 (260)
T ss_pred cccchhhhhhhccceee----c--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc-cccccchhh
Confidence 45567777777776643 2 46777888888888888 666566655667788888888888876 2211 1255
Q ss_pred CCCCCcEEECcCCccc
Q 007762 121 HLTSIEELHLSNNHFQ 136 (590)
Q Consensus 121 ~l~~L~~L~ls~n~~~ 136 (590)
.+.+|..|++.+|...
T Consensus 114 ~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 114 ELENLKSLDLFNCSVT 129 (260)
T ss_pred hhcchhhhhcccCCcc
Confidence 5667777788777654
No 69
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.97 E-value=0.00028 Score=63.88 Aligned_cols=72 Identities=19% Similarity=0.080 Sum_probs=40.4
Q ss_pred cccCCCCcEEEcCCCcCCCC-ccccccccCCCCEEECcCCcccCCC---cccccCCCCCCEEECcCCccCCCCcccc
Q 007762 463 FFNYHSLVTLDLSYNRLNGS-ISDWVDGLSQLSHLILGHNNLEGEV---PVQLCKLNQLQLLDLSNNNLHGPIPPCF 535 (590)
Q Consensus 463 ~~~~~~L~~L~ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 535 (590)
...+++|++|++++|++... --..+..+.+|..|++.+|..+... -..|.-+++|++||-....=. ..|.+.
T Consensus 87 ~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~~~-Ea~~~~ 162 (260)
T KOG2739|consen 87 AEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVDGE-EAPEAD 162 (260)
T ss_pred hhhCCceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHhhhhccccccccCCc-cccccc
Confidence 34457777777777777631 0112445666777777777665421 234666777777665543332 344443
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.65 E-value=5.9e-05 Score=68.40 Aligned_cols=99 Identities=23% Similarity=0.244 Sum_probs=59.4
Q ss_pred CCCcEEEcccCcCCCCCCCCCCCCcccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCc-cccccccCCCCEEE
Q 007762 419 DWLQILDISDNNISGSLPSCFHPLSIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSI-SDWVDGLSQLSHLI 497 (590)
Q Consensus 419 ~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~-~~~~~~l~~L~~L~ 497 (590)
.+.+.|++.+|.++ .+.-+..++.|+.|.|+-|+++. +.+ +..|+.|+.|+|+.|.|.+.. -..+.++++|+.|.
T Consensus 19 ~~vkKLNcwg~~L~-DIsic~kMp~lEVLsLSvNkIss-L~p--l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLD-DISICEKMPLLEVLSLSVNKISS-LAP--LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HHhhhhcccCCCcc-HHHHHHhcccceeEEeecccccc-chh--HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 34555666666655 22223335555566666555532 221 677778888888888776421 13456777888888
Q ss_pred CcCCcccCCCcc-----cccCCCCCCEEE
Q 007762 498 LGHNNLEGEVPV-----QLCKLNQLQLLD 521 (590)
Q Consensus 498 L~~n~l~~~~~~-----~~~~l~~L~~L~ 521 (590)
|..|+-.+.-+. .+..||+|++||
T Consensus 95 L~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 95 LDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hccCCcccccchhHHHHHHHHcccchhcc
Confidence 887777665443 355677777765
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.72 E-value=0.004 Score=33.42 Aligned_cols=19 Identities=58% Similarity=0.917 Sum_probs=9.2
Q ss_pred CCEEECcCCccCCCCccccc
Q 007762 517 LQLLDLSNNNLHGPIPPCFD 536 (590)
Q Consensus 517 L~~L~l~~n~l~~~~p~~~~ 536 (590)
|++||+++|+++ .+|+.|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 445555555555 4444443
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.53 E-value=0.0054 Score=32.89 Aligned_cols=19 Identities=37% Similarity=0.508 Sum_probs=9.7
Q ss_pred CCEEECcCCcccCCCccccc
Q 007762 493 LSHLILGHNNLEGEVPVQLC 512 (590)
Q Consensus 493 L~~L~L~~n~l~~~~~~~~~ 512 (590)
|++||+++|+++ .+|..|+
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 455555555555 4444443
No 73
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=92.66 E-value=0.00051 Score=70.32 Aligned_cols=39 Identities=31% Similarity=0.405 Sum_probs=23.3
Q ss_pred CcccEEEccCCcCCCCCchhhhhc---CCCCcEEEccCceec
Q 007762 249 KRLRLLDISNNNFRGHIPVEIGDV---LPGLFSLNISMNALD 287 (590)
Q Consensus 249 ~~L~~L~l~~n~l~~~~~~~~~~~---~~~L~~L~L~~n~~~ 287 (590)
+.++.++++.|.+++.....+.+. ++.++.+.+++|.+.
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 456677777776665544443321 346677777777665
No 74
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.58 E-value=0.073 Score=26.36 Aligned_cols=13 Identities=62% Similarity=0.805 Sum_probs=4.9
Q ss_pred CCCEEECcCCccC
Q 007762 516 QLQLLDLSNNNLH 528 (590)
Q Consensus 516 ~L~~L~l~~n~l~ 528 (590)
+|+.|++++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 3445555555543
No 75
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.96 E-value=0.03 Score=49.02 Aligned_cols=81 Identities=20% Similarity=0.188 Sum_probs=40.0
Q ss_pred CCCeEeCcCCcCccccccchHhhhcCCCCcEEecCCCCCCCCCCCCCccccc-CCCCCcEEEeecc-cccccCCccccCC
Q 007762 20 SLELLDMECTRIALNTSFLQIISESMPSLKYLSLSDSTLGTNSSKILDRGLC-SLVHLQELYIYNN-DLRGSLPWCMANM 97 (590)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~~~~l~-~l~~L~~L~L~~n-~i~~~~~~~~~~l 97 (590)
.++.++.+++ ++.....+.+. .++.++.|.+.+|..-+ .---+.+. -.++|+.|++++| +|++..-..+..+
T Consensus 102 ~IeaVDAsds--~I~~eGle~L~-~l~~i~~l~l~~ck~~d---D~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~l 175 (221)
T KOG3864|consen 102 KIEAVDASDS--SIMYEGLEHLR-DLRSIKSLSLANCKYFD---DWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKL 175 (221)
T ss_pred eEEEEecCCc--hHHHHHHHHHh-ccchhhhheeccccchh---hHHHHHhcccccchheeeccCCCeechhHHHHHHHh
Confidence 3556666666 55566666666 66667777776665321 00001111 2344555555544 3343333344444
Q ss_pred CCCcEEEcc
Q 007762 98 TSLRILYVS 106 (590)
Q Consensus 98 ~~L~~L~ls 106 (590)
++|+.|.++
T Consensus 176 knLr~L~l~ 184 (221)
T KOG3864|consen 176 KNLRRLHLY 184 (221)
T ss_pred hhhHHHHhc
Confidence 555544443
No 76
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=89.96 E-value=0.27 Score=27.45 Aligned_cols=16 Identities=50% Similarity=0.576 Sum_probs=9.7
Q ss_pred CCCCEEECcCCccCCC
Q 007762 515 NQLQLLDLSNNNLHGP 530 (590)
Q Consensus 515 ~~L~~L~l~~n~l~~~ 530 (590)
++|+.|+|++|+|...
T Consensus 2 ~~L~~L~L~~N~l~~l 17 (26)
T smart00369 2 PNLRELDLSNNQLSSL 17 (26)
T ss_pred CCCCEEECCCCcCCcC
Confidence 4566666666666643
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=89.96 E-value=0.27 Score=27.45 Aligned_cols=16 Identities=50% Similarity=0.576 Sum_probs=9.7
Q ss_pred CCCCEEECcCCccCCC
Q 007762 515 NQLQLLDLSNNNLHGP 530 (590)
Q Consensus 515 ~~L~~L~l~~n~l~~~ 530 (590)
++|+.|+|++|+|...
T Consensus 2 ~~L~~L~L~~N~l~~l 17 (26)
T smart00370 2 PNLRELDLSNNQLSSL 17 (26)
T ss_pred CCCCEEECCCCcCCcC
Confidence 4566666666666643
No 78
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=89.63 E-value=0.0031 Score=64.71 Aligned_cols=193 Identities=25% Similarity=0.244 Sum_probs=125.4
Q ss_pred CCCeEeCcCCcCccccccchHhhh---cCCCCcEEecCCCCCCCCCCCCCcccccCC-CCCcEEEeecccccc----cCC
Q 007762 20 SLELLDMECTRIALNTSFLQIISE---SMPSLKYLSLSDSTLGTNSSKILDRGLCSL-VHLQELYIYNNDLRG----SLP 91 (590)
Q Consensus 20 ~L~~L~l~~~~~~~~~~~~~~~~~---~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l-~~L~~L~L~~n~i~~----~~~ 91 (590)
.+..+.+.+| .+....+..+.. ..+.|..|++++|.+.+.+.......+... ..|++|++..|.++. .+.
T Consensus 88 ~l~~L~L~~~--~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~ 165 (478)
T KOG4308|consen 88 SLLHLSLANN--RLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLA 165 (478)
T ss_pred hHHHhhhhhC--ccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHH
Confidence 3788889998 444444444433 567889999999999886666655555554 668889998888875 334
Q ss_pred ccccCCCCCcEEEcccccccc----ccCCCCcc----CCCCCcEEECcCCccccccC---ccccccCCC-ccEEEccCCc
Q 007762 92 WCMANMTSLRILYVSSNQLTG----SISSSPLV----HLTSIEELHLSNNHFQIPIS---LEPLFNHSR-LKVFWAKNNE 159 (590)
Q Consensus 92 ~~~~~l~~L~~L~ls~n~l~~----~~~~~~l~----~l~~L~~L~ls~n~~~~~~~---~~~l~~l~~-L~~l~l~~~~ 159 (590)
..+.....++.++++.|.+.. .++. .+. ...++++|++++|.++.... ...+...+. +..+++..|.
T Consensus 166 ~~L~~~~~l~~l~l~~n~l~~~g~~~l~~-~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~ 244 (478)
T KOG4308|consen 166 AVLEKNEHLTELDLSLNGLIELGLLVLSQ-ALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNK 244 (478)
T ss_pred HHHhcccchhHHHHHhcccchhhhHHHhh-hhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcC
Confidence 556668889999999987630 1111 222 46678999999988762211 122344444 6668888887
Q ss_pred ccccccCCCCCCCCCcccceEeccCCCCCCCcCChhccCC-CcccEEEcCCCcCccccchHH---hhcCCCCcEEEccCC
Q 007762 160 INAEITQSPSLTAPNFQLSRLSLSSGYGDGVIFPKFLYHQ-HDLEYVDLSHMKMNGEFPTWL---LENNTNLESLFLVND 235 (590)
Q Consensus 160 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~~~~~~~~~~---~~~l~~L~~L~l~~~ 235 (590)
+.+.... ...+.+..+ ..+++++++.|.+.+....++ ...++.++.+.+++|
T Consensus 245 l~d~g~~------------------------~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n 300 (478)
T KOG4308|consen 245 LGDVGVE------------------------KLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNN 300 (478)
T ss_pred cchHHHH------------------------HHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccC
Confidence 6544211 122333334 577888888888875544333 345668888888888
Q ss_pred CCCC
Q 007762 236 SLAG 239 (590)
Q Consensus 236 ~~~~ 239 (590)
.+..
T Consensus 301 ~l~~ 304 (478)
T KOG4308|consen 301 PLTD 304 (478)
T ss_pred cccc
Confidence 8776
No 79
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=88.55 E-value=0.017 Score=51.49 Aligned_cols=82 Identities=21% Similarity=0.188 Sum_probs=63.1
Q ss_pred cccEEECcCccCCCCCCccccccCCCCcEEEcCCCcCCCCccccccccCCCCEEECcCCcccCCCcccccCCCCCCEEEC
Q 007762 443 SIEHVHLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLNGSISDWVDGLSQLSHLILGHNNLEGEVPVQLCKLNQLQLLDL 522 (590)
Q Consensus 443 ~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 522 (590)
..+.||++.|.+ ..+... |+-++.|..||++.|++. ..|..+.....+..+++..|..+ ..|.++...|.++++++
T Consensus 43 r~tvld~~s~r~-vn~~~n-~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 43 RVTVLDLSSNRL-VNLGKN-FSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQ 118 (326)
T ss_pred eeeeehhhhhHH-Hhhccc-hHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhh
Confidence 344444444443 122222 666778899999999998 78888888889999999988887 78999999999999999
Q ss_pred cCCccC
Q 007762 523 SNNNLH 528 (590)
Q Consensus 523 ~~n~l~ 528 (590)
-+|++.
T Consensus 119 k~~~~~ 124 (326)
T KOG0473|consen 119 KKTEFF 124 (326)
T ss_pred ccCcch
Confidence 999876
No 80
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=87.85 E-value=0.014 Score=51.99 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=43.1
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecccccccCCccccCCCCCcEEEccccccccccCCCCccCCC
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNNDLRGSLPWCMANMTSLRILYVSSNQLTGSISSSPLVHLT 123 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~l~~l~ 123 (590)
.+.+.+.||++.+.+.. ....|+.+..|..||++.|.+. ..|..+..+..+++++...|..+ ..|. .+...+
T Consensus 40 ~~kr~tvld~~s~r~vn-----~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~-s~~k~~ 111 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLVN-----LGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPK-SQKKEP 111 (326)
T ss_pred ccceeeeehhhhhHHHh-----hccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCc-cccccC
Confidence 44555555555554422 1134444455555555555554 44555555555555555555544 4444 455555
Q ss_pred CCcEEECcCCcc
Q 007762 124 SIEELHLSNNHF 135 (590)
Q Consensus 124 ~L~~L~ls~n~~ 135 (590)
.++++++-.+.+
T Consensus 112 ~~k~~e~k~~~~ 123 (326)
T KOG0473|consen 112 HPKKNEQKKTEF 123 (326)
T ss_pred CcchhhhccCcc
Confidence 555555555544
No 81
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=87.07 E-value=0.56 Score=26.11 Aligned_cols=14 Identities=36% Similarity=0.472 Sum_probs=6.9
Q ss_pred CCCCEEECcCCccc
Q 007762 491 SQLSHLILGHNNLE 504 (590)
Q Consensus 491 ~~L~~L~L~~n~l~ 504 (590)
++|++|+|++|+++
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00369 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 34455555555554
No 82
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=87.07 E-value=0.56 Score=26.11 Aligned_cols=14 Identities=36% Similarity=0.472 Sum_probs=6.9
Q ss_pred CCCCEEECcCCccc
Q 007762 491 SQLSHLILGHNNLE 504 (590)
Q Consensus 491 ~~L~~L~L~~n~l~ 504 (590)
++|++|+|++|+++
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00370 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 34455555555554
No 83
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=85.77 E-value=0.13 Score=28.07 Aligned_cols=13 Identities=31% Similarity=0.452 Sum_probs=4.3
Q ss_pred CCCEEECcCCccc
Q 007762 492 QLSHLILGHNNLE 504 (590)
Q Consensus 492 ~L~~L~L~~n~l~ 504 (590)
+|++|++++|+++
T Consensus 3 ~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 3 NLETLDLSNNQIT 15 (24)
T ss_dssp T-SEEE-TSSBEH
T ss_pred CCCEEEccCCcCC
Confidence 3334444444333
No 84
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.45 E-value=0.12 Score=45.37 Aligned_cols=35 Identities=23% Similarity=0.201 Sum_probs=20.1
Q ss_pred CCcEEECcCCccccccCccccccCCCccEEEccCCc
Q 007762 124 SIEELHLSNNHFQIPISLEPLFNHSRLKVFWAKNNE 159 (590)
Q Consensus 124 ~L~~L~ls~n~~~~~~~~~~l~~l~~L~~l~l~~~~ 159 (590)
.++.++.+++.+. .++...+.++++++.+.+..|.
T Consensus 102 ~IeaVDAsds~I~-~eGle~L~~l~~i~~l~l~~ck 136 (221)
T KOG3864|consen 102 KIEAVDASDSSIM-YEGLEHLRDLRSIKSLSLANCK 136 (221)
T ss_pred eEEEEecCCchHH-HHHHHHHhccchhhhheecccc
Confidence 4556666666554 3444555666666666665554
No 85
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=73.31 E-value=2.5 Score=23.55 Aligned_cols=19 Identities=37% Similarity=0.579 Sum_probs=12.7
Q ss_pred CCCCEEECcCCccCCCCccc
Q 007762 515 NQLQLLDLSNNNLHGPIPPC 534 (590)
Q Consensus 515 ~~L~~L~l~~n~l~~~~p~~ 534 (590)
++|+.|++++|+++ .+|+.
T Consensus 2 ~~L~~L~vs~N~Lt-~LPeL 20 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPEL 20 (26)
T ss_pred cccceeecCCCccc-cCccc
Confidence 35677777777776 56653
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=70.53 E-value=3.7 Score=22.96 Aligned_cols=14 Identities=29% Similarity=0.506 Sum_probs=7.7
Q ss_pred CCCCEEECcCCccc
Q 007762 491 SQLSHLILGHNNLE 504 (590)
Q Consensus 491 ~~L~~L~L~~n~l~ 504 (590)
.+|+.|++++|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 34555555555554
No 87
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=70.49 E-value=22 Score=36.06 Aligned_cols=16 Identities=44% Similarity=0.513 Sum_probs=8.8
Q ss_pred CCCcccEEEccCCcCC
Q 007762 247 SHKRLRLLDISNNNFR 262 (590)
Q Consensus 247 ~~~~L~~L~l~~n~l~ 262 (590)
.-+.+..|++++|...
T Consensus 438 stqtl~kldisgn~mg 453 (553)
T KOG4242|consen 438 STQTLAKLDISGNGMG 453 (553)
T ss_pred cCcccccccccCCCcc
Confidence 3445566666666443
No 88
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=66.49 E-value=37 Score=34.47 Aligned_cols=69 Identities=25% Similarity=0.224 Sum_probs=34.7
Q ss_pred CCCcccEEEcCCCcCccccchHHhhcCCCCcEEEccCCCCCCCCcCC--CC-CCCcccEEEccCCcCCCCCchhh
Q 007762 198 HQHDLEYVDLSHMKMNGEFPTWLLENNTNLESLFLVNDSLAGPFRLP--IH-SHKRLRLLDISNNNFRGHIPVEI 269 (590)
Q Consensus 198 ~~~~L~~L~ls~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~--~~-~~~~L~~L~l~~n~l~~~~~~~~ 269 (590)
..+.+++++++.+.+.+..|..+. ...--+.+..|..++..-.. .+ .-..+++++++.|...+.+|..+
T Consensus 163 pnpr~r~~dls~npi~dkvpihl~---~p~~pl~lr~c~lsskfis~l~~qsg~~~lteldls~n~~Kddip~~~ 234 (553)
T KOG4242|consen 163 PNPRARQHDLSPNPIGDKVPIHLP---QPGNPLSLRVCELSSKFISKLLIQSGRLWLTELDLSTNGGKDDIPRTL 234 (553)
T ss_pred CcchhhhhccCCCcccccCCcccc---CCCCccchhhhhhhhhHHHHhhhhhccccccccccccCCCCccchhHH
Confidence 345667788888877666654431 11111445555444321100 00 11235667777776666666554
No 89
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=60.11 E-value=6.8 Score=22.24 Aligned_cols=20 Identities=30% Similarity=0.238 Sum_probs=13.2
Q ss_pred CcccEEEcCCCcCccccchH
Q 007762 200 HDLEYVDLSHMKMNGEFPTW 219 (590)
Q Consensus 200 ~~L~~L~ls~~~~~~~~~~~ 219 (590)
++|++|+|++|.+.......
T Consensus 2 ~~L~~LdL~~N~i~~~G~~~ 21 (28)
T smart00368 2 PSLRELDLSNNKLGDEGARA 21 (28)
T ss_pred CccCEEECCCCCCCHHHHHH
Confidence 46788888888776444433
No 90
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=54.18 E-value=9.6 Score=21.06 Aligned_cols=11 Identities=27% Similarity=0.338 Sum_probs=5.8
Q ss_pred CCCCeEeCcCC
Q 007762 19 KSLELLDMECT 29 (590)
Q Consensus 19 ~~L~~L~l~~~ 29 (590)
++|+.|++++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 45555555555
No 91
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=48.82 E-value=7.1 Score=40.14 Aligned_cols=39 Identities=26% Similarity=0.219 Sum_probs=17.9
Q ss_pred cCCCCcEEecCCCCCCCCCCCCCcccccCCCCCcEEEeecc
Q 007762 44 SMPSLKYLSLSDSTLGTNSSKILDRGLCSLVHLQELYIYNN 84 (590)
Q Consensus 44 ~l~~L~~L~L~~~~~~~~~~~~~~~~l~~l~~L~~L~L~~n 84 (590)
+.+.+..++|++|.+-. ++....--..-|+|..|+|++|
T Consensus 216 n~p~i~sl~lsnNrL~~--Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYH--LDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred CCcceeeeecccchhhc--hhhhhHHHHhcchhheeecccc
Confidence 45555556666655432 1111111123455666666665
No 92
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=47.89 E-value=9.3 Score=39.34 Aligned_cols=65 Identities=28% Similarity=0.108 Sum_probs=41.1
Q ss_pred CCcccEEECcCccCCCCCCc--cccccCCCCcEEEcCCC--cCCCCccccccccCCCCEEECcCCcccCC
Q 007762 441 PLSIEHVHLSKNMLHGQLKR--GTFFNYHSLVTLDLSYN--RLNGSISDWVDGLSQLSHLILGHNNLEGE 506 (590)
Q Consensus 441 ~~~L~~L~l~~n~~~~~~~~--~~~~~~~~L~~L~ls~n--~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 506 (590)
.+.+..+.|++|++. .+.. ......|.|+.|+|++| .+.....-+--+...|++|-+.||++...
T Consensus 217 ~p~i~sl~lsnNrL~-~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLY-HLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred Ccceeeeecccchhh-chhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccc
Confidence 457788889999873 3222 11344688999999999 44432211112234678899999988744
No 93
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=24.79 E-value=44 Score=41.95 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=28.7
Q ss_pred EcCCCcCCCCccccccccCCCCEEECcCCccc
Q 007762 473 DLSYNRLNGSISDWVDGLSQLSHLILGHNNLE 504 (590)
Q Consensus 473 ~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 504 (590)
||++|+|+...+..|..+++|+.|+|++|++.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 68999999877788999999999999999877
No 94
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=20.48 E-value=58 Score=40.98 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=28.3
Q ss_pred ECcCccCCCCCCccccccCCCCcEEEcCCCcCC
Q 007762 448 HLSKNMLHGQLKRGTFFNYHSLVTLDLSYNRLN 480 (590)
Q Consensus 448 ~l~~n~~~~~~~~~~~~~~~~L~~L~ls~n~l~ 480 (590)
+|++|++ ..++...|..+++|+.|+|++|.+.
T Consensus 1 DLSnN~L-stLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKI-STIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcC-CccChHHhccCCCceEEEeeCCccc
Confidence 5789999 5788888999999999999999775
Done!