Your job contains 1 sequence.
>007764
MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD
TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007764
(590 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 2902 2.2e-302 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 2899 4.6e-302 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 2886 1.1e-300 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 2605 6.6e-271 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 2529 7.5e-263 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 2529 7.5e-263 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 2529 7.5e-263 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 2527 1.2e-262 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 2526 1.6e-262 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 2524 2.5e-262 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 2524 2.5e-262 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 2524 2.5e-262 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 2524 2.5e-262 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 2523 3.2e-262 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 2521 5.3e-262 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 2476 3.1e-257 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 2456 4.1e-255 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 2374 2.0e-246 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 2369 6.8e-246 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 2339 1.0e-242 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 2334 3.5e-242 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 2334 3.5e-242 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 2318 1.7e-240 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 2307 2.5e-239 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 2307 2.5e-239 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 2294 6.0e-238 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 2294 6.0e-238 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 2291 1.2e-237 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 2286 4.2e-237 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 2284 6.9e-237 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 2284 6.9e-237 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 1429 2.8e-146 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 1100 9.7e-118 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 1100 7.7e-116 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 1097 8.7e-115 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 1078 4.3e-113 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 1080 5.5e-113 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 1078 2.3e-112 2
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 1065 3.4e-111 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 1021 4.7e-103 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 1000 7.9e-101 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 991 7.1e-100 1
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 991 7.1e-100 1
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 608 1.2e-98 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 971 9.4e-98 1
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 584 1.3e-96 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 566 8.7e-96 2
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 570 3.2e-95 2
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 572 7.8e-95 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 571 8.1e-95 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 565 1.6e-94 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 565 1.6e-94 2
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 497 1.6e-94 3
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 559 3.2e-94 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 555 9.8e-94 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 556 1.1e-92 2
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 556 9.1e-92 2
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 880 4.1e-88 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 546 1.4e-86 3
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 831 6.4e-85 2
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 837 1.5e-83 1
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 828 1.3e-82 1
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 809 1.3e-82 2
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 820 9.4e-82 1
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 818 1.5e-81 1
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 803 6.0e-80 1
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 794 5.4e-79 1
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 792 8.7e-79 1
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 466 3.4e-78 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 680 6.5e-67 1
UNIPROTKB|C9IZA5 - symbol:VCP "Transitional endoplasmic r... 678 1.1e-66 1
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 509 9.9e-66 2
CGD|CAL0002985 - symbol:orf19.3949 species:5476 "Candida ... 578 4.2e-61 3
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 479 1.5e-60 2
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 479 1.5e-60 2
TAIR|locus:2198748 - symbol:AT1G05910 species:3702 "Arabi... 598 3.8e-57 1
UNIPROTKB|E1BC78 - symbol:ATAD2 "Uncharacterized protein"... 585 4.7e-57 2
SGD|S000003502 - symbol:YTA7 "Protein that localizes to c... 566 6.6e-57 2
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 585 7.5e-57 1
UNIPROTKB|F8W938 - symbol:NVL "Nuclear valosin-containing... 585 7.5e-57 1
UNIPROTKB|G4N7L8 - symbol:MGG_06380 "ATPase family AAA do... 575 1.2e-56 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 585 1.4e-56 1
UNIPROTKB|E2RRW1 - symbol:ATAD2 "Uncharacterized protein"... 588 6.2e-56 1
ZFIN|ZDB-GENE-110411-210 - symbol:atad2b "ATPase family, ... 559 8.3e-56 2
MGI|MGI:1917722 - symbol:Atad2 "ATPase family, AAA domain... 583 9.2e-56 1
UNIPROTKB|F1NN52 - symbol:F1NN52 "Uncharacterized protein... 573 1.0e-55 2
UNIPROTKB|F1RR16 - symbol:ATAD2 "Uncharacterized protein"... 586 1.0e-55 1
UNIPROTKB|Q6PL18 - symbol:ATAD2 "ATPase family AAA domain... 585 1.3e-55 1
ZFIN|ZDB-GENE-030131-5754 - symbol:wu:fi16e04 "wu:fi16e04... 572 1.4e-55 2
UNIPROTKB|F1MEU3 - symbol:ATAD2B "Uncharacterized protein... 563 1.6e-55 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 551 1.6e-55 2
UNIPROTKB|J9NU31 - symbol:ATAD2B "Uncharacterized protein... 563 1.9e-55 2
UNIPROTKB|Q9ULI0 - symbol:ATAD2B "ATPase family AAA domai... 564 2.5e-55 2
UNIPROTKB|E9PSU0 - symbol:LOC500625 "Protein LOC500625" s... 564 2.5e-55 2
WB|WBGene00008682 - symbol:lex-1 species:6239 "Caenorhabd... 573 2.9e-55 2
UNIPROTKB|P54816 - symbol:lex-1 "Tat-binding homolog 7" s... 573 2.9e-55 2
UNIPROTKB|F1P871 - symbol:ATAD2B "Uncharacterized protein... 563 3.3e-55 2
UNIPROTKB|F1MEY1 - symbol:ATAD2B "Uncharacterized protein... 563 3.3e-55 2
ASPGD|ASPL0000044770 - symbol:AN10191 species:162425 "Eme... 579 8.3e-55 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 555 9.4e-55 2
WARNING: Descriptions of 641 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 2902 (1026.6 bits), Expect = 2.2e-302, P = 2.2e-302
Identities = 553/589 (93%), Positives = 579/589 (98%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
M+NQAESSD+KGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV LHPDTMEKLQ FRGD
Sbjct: 1 MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61 TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILP+DDTIEGV+GN+FDAYLKPYF EAYRPVRKGDLFLVRGGMRS+EFKVIETDP EYCV
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCV 180
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEP++REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 181 VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 360
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLER++KDTHGYVGADLAALCT
Sbjct: 361 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCT 420
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDL+DE IDAEILNSMAV+++HF+TALG SNPSALRETVVEVPNV+W
Sbjct: 421 EAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSW 480
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFIS+KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 541 ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
Score = 551 (199.0 bits), Expect = 6.2e-53, P = 6.2e-53
Identities = 109/262 (41%), Positives = 168/262 (64%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 469 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 529 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
Query: 316 KREKTHGEV---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
+R + G+ R+++QLLT MDG+ ++ V +IGATNRP+ IDPAL R GR D+ I
Sbjct: 589 QRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIY 648
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R ++ + + ++ DVDL +AK T G+ GAD+ +C + IRE ++
Sbjct: 649 IPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIE 708
Query: 433 VIDLEDETIDAEILNSMAVTDE 454
D+E E AE +M +E
Sbjct: 709 K-DIEKERKRAESPEAMEEDEE 729
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 2899 (1025.6 bits), Expect = 4.6e-302, P = 4.6e-302
Identities = 559/589 (94%), Positives = 578/589 (98%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
MSN+ ESSD+K TK+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct: 1 MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 59
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct: 120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEPV+REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 180 VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 239
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKT+GEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 300 APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 359
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLERI+KDTHGYVGADLAALCT
Sbjct: 360 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT 419
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDLED++IDAEILNSMAV++EHF TALG SNPSALRETVVEVPNV+W
Sbjct: 420 EAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSW 479
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 480 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 539
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 540 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Score = 541 (195.5 bits), Expect = 7.9e-52, P = 7.9e-52
Identities = 108/265 (40%), Positives = 169/265 (63%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 468 RETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 528 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 587
Query: 316 KREKTHGEV---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
+R + G+ R+++QLLT MDG+ ++ V +IGATNRP+ ID AL R GR D+ I
Sbjct: 588 QRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIY 647
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE RL + + + ++ DVD+ +AK T G+ GAD+ +C A IRE ++
Sbjct: 648 IPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIE 707
Query: 433 VIDLEDE---TIDAEILNSMAVTDE 454
D+E+E + + E + V DE
Sbjct: 708 K-DIENERRRSQNPEAMEEDMVDDE 731
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 2886 (1021.0 bits), Expect = 1.1e-300, P = 1.1e-300
Identities = 557/589 (94%), Positives = 576/589 (97%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
MS AESSD+K +K+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct: 1 MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 59
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct: 120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEPV+REDE RLD+VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 180 VAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 239
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKT+GEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 300 APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 359
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLERI+KDTHGYVGADLAALCT
Sbjct: 360 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT 419
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDLED++IDAEILNSMAVT+EHF TALG SNPSALRETVVEVPNV+W
Sbjct: 420 EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSW 479
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 480 NDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 539
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 540 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Score = 529 (191.3 bits), Expect = 1.8e-50, P = 1.8e-50
Identities = 104/248 (41%), Positives = 159/248 (64%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GK
Sbjct: 468 RETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 527
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA
Sbjct: 528 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 587
Query: 316 KREKTHGE----VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+R G R+++QLLT MDG+ ++ V +IGATNRP+ ID AL R GR D+ I
Sbjct: 588 QRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLI 647
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
I +PDE RL + + + ++ DVD+ +AK T G+ GAD+ +C A IRE +
Sbjct: 648 YIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENI 707
Query: 432 DVIDLEDE 439
+ D+E E
Sbjct: 708 EK-DIEKE 714
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 2605 (922.1 bits), Expect = 6.6e-271, P = 6.6e-271
Identities = 491/575 (85%), Positives = 536/575 (93%)
Query: 13 TKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDT 72
T +D + ILERKKAPNRL V+EAINDDNSVV L+P+TM++LQFFRGDT+LIKGKKR+DT
Sbjct: 7 TSKDNNNPILERKKAPNRLFVEEAINDDNSVVTLNPETMDQLQFFRGDTLLIKGKKRRDT 66
Query: 73 VCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVT 132
VCI L+D T + KIRMNKVVR+NLRVRLGD++SVHQC+DVKYGKR+H+LP+DDTIEG++
Sbjct: 67 VCIVLSDPTIDPSKIRMNKVVRNNLRVRLGDMISVHQCSDVKYGKRIHVLPIDDTIEGLS 126
Query: 133 GNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGE 192
GNLFD YLKPYF EAYRPVRKGDLFLVRGGMR+VEFKV+ETDP EYC+VAP+T I CEGE
Sbjct: 127 GNLFDLYLKPYFLEAYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIHCEGE 186
Query: 193 PVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG 252
V+REDE+RLDEVGYDD+GGVRKQ+ QIRELVELPLRHPQLFK+IGVKPPKGILLYGPPG
Sbjct: 187 AVKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPG 246
Query: 253 SGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 312
GKT+IARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS
Sbjct: 247 CGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 306
Query: 313 IAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
IAPKREKT GEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPALRRFGRFDREID
Sbjct: 307 IAPKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREID 366
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD GRLE++RIHTKNMKL + VDLE +A +THGYVGADLAALCTE+ALQCIREKMD
Sbjct: 367 ITIPDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMD 426
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRE 492
VIDLEDETI AEIL SM+VT +HF+TAL SNPSALRETVVEVP WEDIGGLE VKRE
Sbjct: 427 VIDLEDETISAEILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRE 486
Query: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552
L+ETVQYPVEHPEKF KFGM PSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELL
Sbjct: 487 LRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 546
Query: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
TMWFGESEANVRE+FDKARQ+APCVLFFDELDSIA
Sbjct: 547 TMWFGESEANVRELFDKARQAAPCVLFFDELDSIA 581
Score = 533 (192.7 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 110/284 (38%), Positives = 176/284 (61%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + ++D+GG+ ++RE V+ P+ HP+ F+ G++P KG+L YGPPG GK
Sbjct: 463 RETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGK 522
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 523 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIAR 582
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R + G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 583 SRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 642
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD R+ +L+ ++ DVDLE + + T G+ GADL +C A IRE ++
Sbjct: 643 IPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIE 702
Query: 433 VIDLED-----ETIDAEILNSMA-----VTDEHFKTALGTSNPS 466
D+E E+ D ++ + +T +HF+ A+ ++ S
Sbjct: 703 K-DIESTKARQESGDTKMEDDSVDPVPEITRDHFQEAMRSARRS 745
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 2529 (895.3 bits), Expect = 7.5e-263, P = 7.5e-263
Identities = 471/584 (80%), Positives = 536/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 2529 (895.3 bits), Expect = 7.5e-263, P = 7.5e-263
Identities = 471/584 (80%), Positives = 536/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 2529 (895.3 bits), Expect = 7.5e-263, P = 7.5e-263
Identities = 471/584 (80%), Positives = 536/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 2527 (894.6 bits), Expect = 1.2e-262, P = 1.2e-262
Identities = 467/582 (80%), Positives = 536/582 (92%)
Query: 7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
+S + D STAIL++K PNRL+VDE+IN+DNSVV L M++LQ FRGDT+L+KG
Sbjct: 2 ASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKG 61
Query: 67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
KKR++TVCI L+DDTC + K+RMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+DD
Sbjct: 62 KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD 121
Query: 127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
T+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT
Sbjct: 122 TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTV 181
Query: 187 IFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 245
I CEGEP++REDE L+EVGYDD+GGVRKQ+AQI+E+VELPLRHP LFK+IGVKPP+GI
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305
LLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 306 FIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFG 365
FIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRRFG
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
RFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAALQ
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 426 CIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG 485
IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVPN+ WEDIGG
Sbjct: 422 AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGG 481
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L++VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFIS
Sbjct: 482 LDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 541
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 542 IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 159/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + + ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ S+ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + +S DVDL+ +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 2526 (894.3 bits), Expect = 1.6e-262, P = 1.6e-262
Identities = 471/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD+K D STAIL++K PNRL+VDE+IN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGSDSKSD--DLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKLSDDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 543 (196.2 bits), Expect = 4.3e-52, P = 4.3e-52
Identities = 104/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDL+ +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 2524 (893.6 bits), Expect = 2.5e-262, P = 2.5e-262
Identities = 470/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 2524 (893.6 bits), Expect = 2.5e-262, P = 2.5e-262
Identities = 470/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 545 (196.9 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 2524 (893.6 bits), Expect = 2.5e-262, P = 2.5e-262
Identities = 470/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 18 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 75
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 76 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 135
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 136 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 195
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 196 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 255
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 256 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 315
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 316 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 375
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 376 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 435
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 436 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 495
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 496 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 555
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 556 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 599
Score = 545 (196.9 bits), Expect = 3.2e-52, P = 3.2e-52
Identities = 105/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 481 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 540
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 541 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 600
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 601 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 660
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 661 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 720
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 2524 (893.6 bits), Expect = 2.5e-262, P = 2.5e-262
Identities = 470/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 534 (193.0 bits), Expect = 4.8e-51, P = 4.8e-51
Identities = 105/242 (43%), Positives = 160/242 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSD--DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 704
Query: 431 MD 432
++
Sbjct: 705 IE 706
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 2523 (893.2 bits), Expect = 3.2e-262, P = 3.2e-262
Identities = 471/584 (80%), Positives = 534/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD K D STAIL++K PNRL+VDE+IN+DNS+V L M++LQ FRGDT+L+
Sbjct: 2 ASGSDTKSD--DLSTAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKRVH+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKLSDDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 537 (194.1 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 103/240 (42%), Positives = 159/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ + +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVD++ +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 2521 (892.5 bits), Expect = 5.3e-262, P = 5.3e-262
Identities = 469/584 (80%), Positives = 535/584 (91%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQ+ VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 542 (195.9 bits), Expect = 5.8e-52, P = 5.8e-52
Identities = 104/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ ++++LV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 2476 (876.7 bits), Expect = 3.1e-257, P = 3.1e-257
Identities = 465/588 (79%), Positives = 530/588 (90%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD+K D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGSDSKAD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEE EKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPA 299
Query: 304 IIFIDEIDSIAPK----REKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDP 359
IIFIDE+D+IA +THGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDP
Sbjct: 300 IIFIDELDAIASDDCFPSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDP 359
Query: 360 ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALC 419
ALRRFGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC
Sbjct: 360 ALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 419
Query: 420 TEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVN 479
+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V
Sbjct: 420 SEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVT 479
Query: 480 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 539
WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANEC
Sbjct: 480 WEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC 539
Query: 540 QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
QANFIS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 587
Score = 542 (195.9 bits), Expect = 6.1e-52, P = 6.1e-52
Identities = 104/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 469 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 528
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 529 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 588
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 589 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 648
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDL+ +AK T+G+ GADL +C A IRE ++
Sbjct: 649 IPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 708
Score = 296 (109.3 bits), Expect = 7.3e-23, P = 7.3e-23
Identities = 54/121 (44%), Positives = 83/121 (68%)
Query: 469 RETVVEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 527
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 191 REDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTG 250
Query: 528 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++ ++AP ++F DELD+IA
Sbjct: 251 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIA 310
Query: 588 T 588
+
Sbjct: 311 S 311
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 2456 (869.6 bits), Expect = 4.1e-255, P = 4.1e-255
Identities = 453/582 (77%), Positives = 530/582 (91%)
Query: 7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
+SD K DFSTAIL++K PNRL+VDEA N+DNS+V L ME+LQ FRGDT++++G
Sbjct: 6 ASDPK--TEDFSTAILKQKIRPNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTVVLRG 63
Query: 67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
+KR+ TVCI L DDTC ++RMN+V R+NLRVRLGDV+S+H C DVKYGKR+H+LP+DD
Sbjct: 64 RKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVLPIDD 123
Query: 127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
TIEG+TGNLFD +LKPYF EAYRPV KGD+FLVRGGMR+VEFKV+ETDP +C+VAPDT
Sbjct: 124 TIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAPDTI 183
Query: 187 IFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 245
I CEGEP++REDE L+++GYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GI
Sbjct: 184 IHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 243
Query: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305
LLYGPPG+GKTL+ARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+II
Sbjct: 244 LLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 303
Query: 306 FIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFG 365
FIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHV+V+ ATNRPNS+D ALRRFG
Sbjct: 304 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFG 363
Query: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
RFDREIDIG+PD GRLE+L+IHTKNMKLS+DVDLE+I+ +THG+VGADLAALC+EAALQ
Sbjct: 364 RFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQ 423
Query: 426 CIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG 485
IR+KM +IDLED++IDA++LNS+AVT + FK AL SNPSALRETVVEVP+VNWEDIGG
Sbjct: 424 AIRKKMTLIDLEDDSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGG 483
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L+ VKRELQE VQYPVE+P+KF KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANF+S
Sbjct: 484 LDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVS 543
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+KGPELLTMWFGESEANVR++FDKARQ+APC+LFFDELDSIA
Sbjct: 544 IKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIA 585
Score = 516 (186.7 bits), Expect = 4.9e-49, P = 4.9e-49
Identities = 102/240 (42%), Positives = 155/240 (64%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V ++D+GG+ + +++ELV+ P+ +P F G+ P +G+L YGPPG GK
Sbjct: 467 RETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGK 526
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R F++A + AP I+F DE+DSIA
Sbjct: 527 TLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAK 586
Query: 316 KREKTHGEV---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 587 ARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 646
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD R +LR + + ++ DVDL ++K T G+ GADL +C A IRE ++
Sbjct: 647 IPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIE 706
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 2374 (840.7 bits), Expect = 2.0e-246, P = 2.0e-246
Identities = 447/581 (76%), Positives = 517/581 (88%)
Query: 8 SDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGK 67
+D+KG D +TAIL+RK PNRL+V+EA NDDNSVV L M++LQ FRGDT+++KGK
Sbjct: 2 ADSKG--EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59
Query: 68 KRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDT 127
+RK+TVCI L+DDTC + KIRMN+VVR+NL V L DVVSV C DVKYGKRV ILP+D++
Sbjct: 60 RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119
Query: 128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEI 187
EGVTGNLF+ YLKPYF EAYRP+ GD F+VR MR +EFKV+ TDP YC+VAP+T I
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179
Query: 188 FCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGIL 246
FC+G+P++RE+E L+ VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GIL
Sbjct: 180 FCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL 239
Query: 247 LYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIF 306
+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKN+P+IIF
Sbjct: 240 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIF 299
Query: 307 IDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGR 366
IDEID+IAPKR+KTHGEVERRIVSQLLTLMDG+K +H+IV+ ATNRPNSIDPALRRFGR
Sbjct: 300 IDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGR 359
Query: 367 FDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQC 426
FDREIDIG+PD GRLEVLRIHTKNMKL DDVDLE+IA ++HG+VGADLA+LC+EAALQ
Sbjct: 360 FDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQ 419
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 486
IREKMD+IDLED+ IDAE+L S+AVT E+F+ A+ S+PSALRETVVEVPN W DIGGL
Sbjct: 420 IREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGL 479
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
E+VK+ELQE VQYPVEHP+KF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISV
Sbjct: 480 ESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 539
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KGPELLTMWFGESEANVR+IFDKAR +APCVLFFDELDSIA
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIA 580
Score = 525 (189.9 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 107/262 (40%), Positives = 162/262 (61%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + + D+GG+ +++ELV+ P+ HP F G++P +G+L YGPPG GK
Sbjct: 462 RETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGK 521
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R F++A AP ++F DE+DSIA
Sbjct: 522 TLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAK 581
Query: 316 KREKTHGEV---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 582 ARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 641
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD+ R +L+ + + L+ +VDL IAK T G+ GADL +C A IR+ ++
Sbjct: 642 IPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIE 701
Query: 433 VIDLEDETIDAEILNSMAVTDE 454
++ E AE NS DE
Sbjct: 702 A-EIRREKERAENQNSAMDMDE 722
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 2369 (839.0 bits), Expect = 6.8e-246, P = 6.8e-246
Identities = 449/585 (76%), Positives = 513/585 (87%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD+K D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGSDSKAD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGE ES RK A +
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKT 299
Query: 304 I-IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALR 362
IF + D P + THGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALR
Sbjct: 300 AGIF--KSDDCFPSPQ-THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALR 356
Query: 363 RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
RFGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EA
Sbjct: 357 RFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEA 416
Query: 423 ALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWED 482
ALQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WED
Sbjct: 417 ALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWED 476
Query: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
IGGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQAN
Sbjct: 477 IGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN 536
Query: 543 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
FIS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 537 FISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 581
Score = 542 (195.9 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 104/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 463 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 522
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 523 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 582
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 583 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 642
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDL+ +AK T+G+ GADL +C A IRE ++
Sbjct: 643 IPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 702
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 2339 (828.4 bits), Expect = 1.0e-242, P = 1.0e-242
Identities = 432/582 (74%), Positives = 521/582 (89%)
Query: 8 SDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGK 67
+D K + D +TAIL++KK PN+L+V +A NDDNS++ L TME LQ FRGDT+L++GK
Sbjct: 22 ADVK-EESDVATAILKKKKKPNQLMVADATNDDNSIIALSNSTMEALQLFRGDTVLVRGK 80
Query: 68 KRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDT 127
KRKDTV I LADD ++ R+N+VVR NLRV+ GDVV++H C D+KY KR+ +LP+ DT
Sbjct: 81 KRKDTVLIVLADDELDDGSARLNRVVRHNLRVKHGDVVTIHPCPDIKYAKRIAVLPIADT 140
Query: 128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEI 187
+EG+TG+LFD +L PYF EAYRPVR+GD+FLVRGGMR VEFKV+E DPPEY +VA DT I
Sbjct: 141 VEGLTGSLFDVFLAPYFREAYRPVRQGDIFLVRGGMRQVEFKVVEVDPPEYGIVAQDTVI 200
Query: 188 FCEGEPVRR-EDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGIL 246
CEGEP++R E+EN L+EVGYDD+GG RKQMAQIRE+VELPLRHPQLFKSIG+KPP+G+L
Sbjct: 201 HCEGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVL 260
Query: 247 LYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIF 306
LYGPPG+GKTL+ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+P+IIF
Sbjct: 261 LYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIF 320
Query: 307 IDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGR 366
IDEIDSIAPKREKT+GEVERR+VSQLLTLMDG+K+R++V+V+ ATNRPNSIDPALRRFGR
Sbjct: 321 IDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGR 380
Query: 367 FDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQC 426
FDRE+DIG+PD GRLE+L+IHTKNMKL DDVDLE+IA +THGYVG+D+AALC+EAA+Q
Sbjct: 381 FDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQ 440
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRET-VVEVPNVNWEDIGG 485
IREKMD+IDL+++TIDAE+L+S+ VT E+F+ ALG SNPSALRE VVEVPNV WEDIGG
Sbjct: 441 IREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGG 500
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L+ VK++L+E VQYPV+HPEKF KFG+SPS+GVLFYGPPG GKT+LAKA+ANEC ANFIS
Sbjct: 501 LDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFIS 560
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
VKGPELL+MWFGESE+N+R+IFDKAR +APC++F DELDSIA
Sbjct: 561 VKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIA 602
Score = 558 (201.5 bits), Expect = 1.0e-53, P = 1.0e-53
Identities = 118/275 (42%), Positives = 174/275 (63%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ + +RE V+ P+ HP+ F G+ P +G+L YGPPG+GKT++A+AVAN
Sbjct: 493 VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 552
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F + GPE++S GESESN+R F++A AP I+F+DE+DSIA R + G+
Sbjct: 553 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDA 612
Query: 325 ---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+V+QLLT MDG+ S+ +V VIGATNRP +DPAL R GR D I + +PDE+GR
Sbjct: 613 GGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGR 672
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM--DV-----I 434
L +L+ + +SDDVDL+ IA THG+ GADL + A I+E + D+ +
Sbjct: 673 LSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGFITQRAVKIAIKESITADINRTKAL 732
Query: 435 DL--EDETIDAEILNSMA-VTDEHFKTALGTSNPS 466
+ ED +D + + + +T HF+ A+ + S
Sbjct: 733 EAAGEDVPMDEDAEDPVPELTKRHFEEAMQQARKS 767
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 2334 (826.7 bits), Expect = 3.5e-242, P = 3.5e-242
Identities = 437/589 (74%), Positives = 519/589 (88%)
Query: 1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
M++ D K K D +TAIL+ KK PNRL++D++ NDDNS+V+L M++L FRG
Sbjct: 1 MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
D++++KGKKR++TV I L D C KI+MNKVVR+NLR RLGDVVS+ A ++YGKRV
Sbjct: 61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISS-AQLEYGKRV 119
Query: 120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
H+LP+DDTIEG+TGNLFD +L+PYFT+AYRPV KGD+F V+ MR+VEFKV+ETDP C
Sbjct: 120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPAC 179
Query: 180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+VAPDT I EG+P++RE+E L+EVGYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG
Sbjct: 180 IVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG 239
Query: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE 298
VKPP+GILL+GPPG+GKTLIARAVANETGAFFF INGPEIMSK++GESESNLRKAF E E
Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECE 299
Query: 299 KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
KN+P+I+FIDEID+IAPKREK HGEVE+RIVSQLLTLMDGLK+RAHV+VI ATNRPNSID
Sbjct: 300 KNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSID 359
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
ALRRFGRFDREIDIG+PD VGRLE+LRIHTKNMKL +DVDLE++A + HG+VGADLA+L
Sbjct: 360 GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASL 419
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
C+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT E+F+ A+G S+PSALRE VVE PN
Sbjct: 420 CSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNT 479
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANE
Sbjct: 480 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
CQANFIS+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA
Sbjct: 540 CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Score = 538 (194.4 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 122/326 (37%), Positives = 184/326 (56%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV-- 324
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R + G+
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 325 -ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE RL+
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ 660
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD-VIDLEDETID 442
+ + + LS D+DL +AK+T G+ GADL +C A IRE ++ I E E D
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQD 720
Query: 443 AEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL-QETVQYPV 501
+ DE L P R E + + K E+ +T+Q
Sbjct: 721 RSARGEELMEDE-----LADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSR 775
Query: 502 EHPEKFEKFGMSPSKGVLFYGPPGCG 527
F+ G +PS G G G G
Sbjct: 776 GFGNNFKFPGEAPSAGQPVGGNGGSG 801
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 2334 (826.7 bits), Expect = 3.5e-242, P = 3.5e-242
Identities = 437/589 (74%), Positives = 519/589 (88%)
Query: 1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
M++ D K K D +TAIL+ KK PNRL++D++ NDDNS+V+L M++L FRG
Sbjct: 1 MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
D++++KGKKR++TV I L D C KI+MNKVVR+NLR RLGDVVS+ A ++YGKRV
Sbjct: 61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISS-AQLEYGKRV 119
Query: 120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
H+LP+DDTIEG+TGNLFD +L+PYFT+AYRPV KGD+F V+ MR+VEFKV+ETDP C
Sbjct: 120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPAC 179
Query: 180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+VAPDT I EG+P++RE+E L+EVGYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG
Sbjct: 180 IVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG 239
Query: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE 298
VKPP+GILL+GPPG+GKTLIARAVANETGAFFF INGPEIMSK++GESESNLRKAF E E
Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECE 299
Query: 299 KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
KN+P+I+FIDEID+IAPKREK HGEVE+RIVSQLLTLMDGLK+RAHV+VI ATNRPNSID
Sbjct: 300 KNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSID 359
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
ALRRFGRFDREIDIG+PD VGRLE+LRIHTKNMKL +DVDLE++A + HG+VGADLA+L
Sbjct: 360 GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASL 419
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
C+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT E+F+ A+G S+PSALRE VVE PN
Sbjct: 420 CSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNT 479
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANE
Sbjct: 480 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
CQANFIS+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA
Sbjct: 540 CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Score = 538 (194.4 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 122/326 (37%), Positives = 184/326 (56%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV-- 324
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R + G+
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 325 -ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE RL+
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ 660
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD-VIDLEDETID 442
+ + + LS D+DL +AK+T G+ GADL +C A IRE ++ I E E D
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQD 720
Query: 443 AEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL-QETVQYPV 501
+ DE L P R E + + K E+ +T+Q
Sbjct: 721 RSARGEELMEDE-----LADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSR 775
Query: 502 EHPEKFEKFGMSPSKGVLFYGPPGCG 527
F+ G +PS G G G G
Sbjct: 776 GFGNNFKFPGEAPSAGQPVGGNGGSG 801
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 2318 (821.0 bits), Expect = 1.7e-240, P = 1.7e-240
Identities = 431/585 (73%), Positives = 517/585 (88%)
Query: 9 DAKGTKR----DFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
DA G ++ D STAIL++KK PN L+V +A+NDDNS + L +TM+ L FRGDT+ +
Sbjct: 21 DASGAEKKEELDTSTAILKKKKKPNSLIVTDAVNDDNSTISLSNNTMDTLGLFRGDTVTV 80
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
+GKKRK+TV I LADD ++ R+N+VVR NLRV+ GD+++VH C D+KY KR+ +LP+
Sbjct: 81 RGKKRKETVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPI 140
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DT+EG+TG+LFD YL PYF + YRPV++GDLF VRGGMR VEFKV+E DPPE+ +VAPD
Sbjct: 141 ADTVEGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPD 200
Query: 185 TEIFCEGEPVRREDE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I EGEP++REDE N L+EVGYDD+GG RKQMAQIRELVELPLRHPQLFKSIG+KPP+
Sbjct: 201 TIIHSEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPR 260
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GIL+YGPPG+GKTL+ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+P+
Sbjct: 261 GILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA 320
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDEIDSIAPKREKT+GEVERR+VSQLLTLMDG+K+R++V+V+ ATNRPNSIDPALRR
Sbjct: 321 IIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRR 380
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L IHTKNMKL +DVDLE IA +THGYVG+DLA+LC+EAA
Sbjct: 381 FGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAA 440
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRET-VVEVPNVNWED 482
+Q IREKMD+IDL+++TIDAE+L+S+ VT E+F+ ALG SNPSALRE VVEVPNV WED
Sbjct: 441 MQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWED 500
Query: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
IGGLE VKREL E+VQYPV+HPEKF+KFG+SPS+GVLFYGPPG GKT+LAKA+ANEC AN
Sbjct: 501 IGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN 560
Query: 543 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
FISVKGPELL+MWFGESE+N+R+IFDKAR +APCV+F DELDSIA
Sbjct: 561 FISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIA 605
Score = 518 (187.4 bits), Expect = 3.4e-49, P = 3.4e-49
Identities = 100/230 (43%), Positives = 150/230 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ + ++ E V+ P+ HP+ F+ G+ P +G+L YGPPG+GKT++A+AVAN
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F + GPE++S GESESN+R F++A AP ++F+DE+DSIA R + G+
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDA 615
Query: 325 ---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+V+QLLT MDG+ S+ +V VIGATNRP +D AL R GR D + + +PD+ R
Sbjct: 616 GGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASR 675
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
+L+ + ++ DVD+E IA THG+ GADL + A I+E +
Sbjct: 676 EGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESI 725
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 2307 (817.2 bits), Expect = 2.5e-239, P = 2.5e-239
Identities = 430/583 (73%), Positives = 510/583 (87%)
Query: 6 ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIK 65
++S A +TAIL RKK N LVVD+A NDDNSV+ + +TME LQ FRGDT+L+K
Sbjct: 12 DASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71
Query: 66 GKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
GKKRKDTV I LADD + R+N+ VR+NLRVRLGD+V+VH C D+KY R+ +LP+
Sbjct: 72 GKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIA 131
Query: 126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDT 185
DT+EG+ G+LFD YLKPYF EAYRPVRKGDLF VRGGMR VEFKV+E DP E +VA DT
Sbjct: 132 DTVEGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDT 191
Query: 186 EIFCEGEPVRREDE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKG 244
I CEGEP+ REDE N L+EVGYDD+GG +KQMAQIRELVELPLRHPQLFKSIG+KPPKG
Sbjct: 192 IIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKG 251
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
IL+YGPPG+GKT++ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+PSI
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSI 311
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRF 364
IFIDEIDSIAPKR+KT+GEVERR+VSQLLTLMDG+K+R++V+VI ATNRPNSIDPALRRF
Sbjct: 312 IFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRF 371
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
GRFDRE+DIGVPD GRLE+LRIHTKNMKL+DDVDLE IA +THG+VGAD+A+LC+EAA+
Sbjct: 372 GRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAM 431
Query: 425 QCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIG 484
Q IREKMD+IDLE+ETID E+LNS+ VT ++F+ ALG SNPSALRETVVE NV W+DIG
Sbjct: 432 QQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIG 491
Query: 485 GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI 544
GL+N+K EL+ETV+YPV HP++++KFG++P+KGVLF+GPPG GKTLLAKA+A E ANFI
Sbjct: 492 GLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFI 551
Query: 545 SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
SVKGPELL+MW+GESE+N+R+IFDKAR +AP V+F DELDSIA
Sbjct: 552 SVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 594
Score = 552 (199.4 bits), Expect = 5.5e-53, P = 5.5e-53
Identities = 116/273 (42%), Positives = 170/273 (62%)
Query: 166 VEFKVIETDPPEYCVVAPDTEIFCEGE--P-VRREDENRLDEVGYDDVGGVRKQMAQIRE 222
+E + I+T+ V D F G P RE V +DD+GG+ +++E
Sbjct: 443 LEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKE 502
Query: 223 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 282
VE P+ HP ++ G+ P KG+L +GPPG+GKTL+A+AVA E A F + GPE++S
Sbjct: 503 TVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMW 562
Query: 283 AGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV---ERRIVSQLLTLMDGL 339
GESESN+R F++A AP+++F+DE+DSIA R +HG+ R+V+QLLT MDG+
Sbjct: 563 YGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGM 622
Query: 340 KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVD 399
++ +V VIGATNRP+ IDPAL R GR D+ I + +PDE RL +L+ +N L +D
Sbjct: 623 NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLD 682
Query: 400 LERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
L IAK THG+ GADL+ + +A I++ ++
Sbjct: 683 LNEIAKITHGFSGADLSYIVQRSAKFAIKDSIE 715
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 2307 (817.2 bits), Expect = 2.5e-239, P = 2.5e-239
Identities = 430/583 (73%), Positives = 510/583 (87%)
Query: 6 ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIK 65
++S A +TAIL RKK N LVVD+A NDDNSV+ + +TME LQ FRGDT+L+K
Sbjct: 12 DASGASAVDDKTATAILRRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVK 71
Query: 66 GKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
GKKRKDTV I LADD + R+N+ VR+NLRVRLGD+V+VH C D+KY R+ +LP+
Sbjct: 72 GKKRKDTVLIVLADDDMPDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIA 131
Query: 126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDT 185
DT+EG+ G+LFD YLKPYF EAYRPVRKGDLF VRGGMR VEFKV+E DP E +VA DT
Sbjct: 132 DTVEGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDT 191
Query: 186 EIFCEGEPVRREDE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKG 244
I CEGEP+ REDE N L+EVGYDD+GG +KQMAQIRELVELPLRHPQLFKSIG+KPPKG
Sbjct: 192 IIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKG 251
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
IL+YGPPG+GKT++ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+PSI
Sbjct: 252 ILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSI 311
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRF 364
IFIDEIDSIAPKR+KT+GEVERR+VSQLLTLMDG+K+R++V+VI ATNRPNSIDPALRRF
Sbjct: 312 IFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRF 371
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
GRFDRE+DIGVPD GRLE+LRIHTKNMKL+DDVDLE IA +THG+VGAD+A+LC+EAA+
Sbjct: 372 GRFDREVDIGVPDAEGRLEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAM 431
Query: 425 QCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIG 484
Q IREKMD+IDLE+ETID E+LNS+ VT ++F+ ALG SNPSALRETVVE NV W+DIG
Sbjct: 432 QQIREKMDLIDLEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIG 491
Query: 485 GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI 544
GL+N+K EL+ETV+YPV HP++++KFG++P+KGVLF+GPPG GKTLLAKA+A E ANFI
Sbjct: 492 GLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFI 551
Query: 545 SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
SVKGPELL+MW+GESE+N+R+IFDKAR +AP V+F DELDSIA
Sbjct: 552 SVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 594
Score = 552 (199.4 bits), Expect = 5.5e-53, P = 5.5e-53
Identities = 116/273 (42%), Positives = 170/273 (62%)
Query: 166 VEFKVIETDPPEYCVVAPDTEIFCEGE--P-VRREDENRLDEVGYDDVGGVRKQMAQIRE 222
+E + I+T+ V D F G P RE V +DD+GG+ +++E
Sbjct: 443 LEEETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKE 502
Query: 223 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL 282
VE P+ HP ++ G+ P KG+L +GPPG+GKTL+A+AVA E A F + GPE++S
Sbjct: 503 TVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMW 562
Query: 283 AGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV---ERRIVSQLLTLMDGL 339
GESESN+R F++A AP+++F+DE+DSIA R +HG+ R+V+QLLT MDG+
Sbjct: 563 YGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGM 622
Query: 340 KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVD 399
++ +V VIGATNRP+ IDPAL R GR D+ I + +PDE RL +L+ +N L +D
Sbjct: 623 NAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLD 682
Query: 400 LERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
L IAK THG+ GADL+ + +A I++ ++
Sbjct: 683 LNEIAKITHGFSGADLSYIVQRSAKFAIKDSIE 715
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 2294 (812.6 bits), Expect = 6.0e-238, P = 6.0e-238
Identities = 421/567 (74%), Positives = 498/567 (87%)
Query: 24 RKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCE 83
+KK +RL+V+EA NDDNSVV L+ ME+L FFRGDTI+IKGKKR T+CI L D+ +
Sbjct: 22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81
Query: 84 EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN-LFDAYLKP 142
E KIR+NKV R NLRV LGDVV V C ++ YGK++ +LP+DDTIEG+ + LF+ +LKP
Sbjct: 82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141
Query: 143 YFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRL 202
YF E+YRPV+KGDLFLVRGG SVEFKV+E DP ++C+V+PDT I+ EG+P++R+DE +L
Sbjct: 142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201
Query: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
DE+GYDD+GG +KQ+AQIRE++ELPLRHP LFK++GVKPP+G+LLYGPPGSGKT IARAV
Sbjct: 202 DEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322
ANETGAFFF INGPE+MSK+AGE+E+NLR+AFEEAEKN+P+IIFIDEIDSIAPKREKT+G
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 321
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EVERR+VSQLLTLMDG+KSR V+VI ATNR NSIDPALRRFGRFDREIDIGVPD+ GR
Sbjct: 322 EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRF 381
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
E+LRIHTKNMKLS DV LE +A +THG+VGADLA LCTEAAL CIREKMDVIDLEDE ID
Sbjct: 382 EILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIID 441
Query: 443 AEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVE 502
E+L SM VT +HF ALGT NPS+LRETVVEVPNV W+DIGGL+ VK L+E + YP++
Sbjct: 442 KEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 503 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 562
HP+KFEKFGMSPS+GVLFYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGESEAN
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 563 VREIFDKARQSAPCVLFFDELDSIATQ 589
VRE+FDKAR +APCVLFFDELDSI TQ
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQ 588
Score = 493 (178.6 bits), Expect = 5.7e-48, Sum P(2) = 5.7e-48
Identities = 98/248 (39%), Positives = 158/248 (63%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V +DD+GG+ + + +RE++ P+ HP F+ G+ P +G+L YGPPG GK
Sbjct: 468 RETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGK 527
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A AP ++F DE+DSI
Sbjct: 528 TLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGT 587
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
+R + G+ R+++QLLT +DG+ + ++ IGATNRP +D AL R GR D+ I
Sbjct: 588 QRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIY 647
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD R+ +L + ++++V ++ +A+ T G+ GADLA LC AA IR+ +D
Sbjct: 648 IPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAID 707
Query: 433 VIDLEDET 440
++ ++
Sbjct: 708 AEEMNKKS 715
Score = 38 (18.4 bits), Expect = 5.7e-48, Sum P(2) = 5.7e-48
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
D+ KR+ + +ER+ L + + I VVV+
Sbjct: 310 DSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVI 347
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 2294 (812.6 bits), Expect = 6.0e-238, P = 6.0e-238
Identities = 421/567 (74%), Positives = 498/567 (87%)
Query: 24 RKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCE 83
+KK +RL+V+EA NDDNSVV L+ ME+L FFRGDTI+IKGKKR T+CI L D+ +
Sbjct: 22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81
Query: 84 EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN-LFDAYLKP 142
E KIR+NKV R NLRV LGDVV V C ++ YGK++ +LP+DDTIEG+ + LF+ +LKP
Sbjct: 82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141
Query: 143 YFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRL 202
YF E+YRPV+KGDLFLVRGG SVEFKV+E DP ++C+V+PDT I+ EG+P++R+DE +L
Sbjct: 142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201
Query: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
DE+GYDD+GG +KQ+AQIRE++ELPLRHP LFK++GVKPP+G+LLYGPPGSGKT IARAV
Sbjct: 202 DEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322
ANETGAFFF INGPE+MSK+AGE+E+NLR+AFEEAEKN+P+IIFIDEIDSIAPKREKT+G
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 321
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EVERR+VSQLLTLMDG+KSR V+VI ATNR NSIDPALRRFGRFDREIDIGVPD+ GR
Sbjct: 322 EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRF 381
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
E+LRIHTKNMKLS DV LE +A +THG+VGADLA LCTEAAL CIREKMDVIDLEDE ID
Sbjct: 382 EILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIID 441
Query: 443 AEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVE 502
E+L SM VT +HF ALGT NPS+LRETVVEVPNV W+DIGGL+ VK L+E + YP++
Sbjct: 442 KEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 503 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 562
HP+KFEKFGMSPS+GVLFYGPPGCGKTLLAKA+A+EC ANF+S+KGPELLTMWFGESEAN
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 563 VREIFDKARQSAPCVLFFDELDSIATQ 589
VRE+FDKAR +APCVLFFDELDSI TQ
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQ 588
Score = 493 (178.6 bits), Expect = 5.7e-48, Sum P(2) = 5.7e-48
Identities = 98/248 (39%), Positives = 158/248 (63%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V +DD+GG+ + + +RE++ P+ HP F+ G+ P +G+L YGPPG GK
Sbjct: 468 RETVVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGK 527
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A AP ++F DE+DSI
Sbjct: 528 TLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGT 587
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
+R + G+ R+++QLLT +DG+ + ++ IGATNRP +D AL R GR D+ I
Sbjct: 588 QRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIY 647
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PD R+ +L + ++++V ++ +A+ T G+ GADLA LC AA IR+ +D
Sbjct: 648 IPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDAID 707
Query: 433 VIDLEDET 440
++ ++
Sbjct: 708 AEEMNKKS 715
Score = 38 (18.4 bits), Expect = 5.7e-48, Sum P(2) = 5.7e-48
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
D+ KR+ + +ER+ L + + I VVV+
Sbjct: 310 DSIAPKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVI 347
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 2291 (811.5 bits), Expect = 1.2e-237, P = 1.2e-237
Identities = 426/573 (74%), Positives = 513/573 (89%)
Query: 16 DFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCI 75
D +TAIL +K+ PN LVVD+A NDDNSV+ L +TME LQ FRGDT+++KGK+RKDTV I
Sbjct: 31 DTATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLI 90
Query: 76 ALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNL 135
L D+ E+ R+N+VVR+NLRVRLGD+V+++ C D+KY +R+ +LP+ DT+EG+TG+L
Sbjct: 91 VLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGLTGSL 150
Query: 136 FDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVR 195
FD YLKPYF EAYRP+RKGDLF+VRG MR VEFKV++ P E+ +V+ DT I EGEP+
Sbjct: 151 FDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIHWEGEPIN 210
Query: 196 REDE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
REDE + L EVGYDD+GG R+QMAQIRELVELPLRHPQLFKSIG+KPP+GIL+YGPPG+G
Sbjct: 211 REDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTG 270
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+P+IIFIDEIDSIA
Sbjct: 271 KTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 330
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
PKREKT+GEVERR+VSQLLTLMDG+K+R++V+V+ ATNRPNSIDPALRRFGRFDRE+D+G
Sbjct: 331 PKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVG 390
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
+PD GRLE+LRIHTKNMKL+DDVDLE+IA +THGYVG+DLA+LC+EAA+Q IREKMD+I
Sbjct: 391 IPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMI 450
Query: 435 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
DL+++ IDAE+L+S+ VT ++F+ ALG+SNPSALRETVVEVPNV WEDIGGLE VKREL+
Sbjct: 451 DLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELR 510
Query: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 554
ETVQ PV + EKF +FG++PSKGVLF+GPPG GKTLLAKAIANEC ANFISVKGPELL+M
Sbjct: 511 ETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSM 570
Query: 555 WFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
WFGESE+NVR+IFDKAR +APCV+F DELDSIA
Sbjct: 571 WFGESESNVRDIFDKARAAAPCVVFLDELDSIA 603
Score = 549 (198.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 110/251 (43%), Positives = 166/251 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V ++D+GG+ + ++RE V++P+ + + F GV P KG+L +GPPG+GK
Sbjct: 485 RETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGK 544
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE++S GESESN+R F++A AP ++F+DE+DSIA
Sbjct: 545 TLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAK 604
Query: 316 KREKTHGEVER--RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
R + G+ R+V+QLLT MDG+ S+ +V VIGATNRP+ IDPAL R GR D+ I +
Sbjct: 605 ARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYV 664
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV 433
+PDE R +L+ ++ +++DVDL +AK THG+ GADL + A I++ ++
Sbjct: 665 PLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEE 724
Query: 434 -IDLEDETIDA 443
I E+ET +A
Sbjct: 725 DIKRENETGEA 735
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 2286 (809.8 bits), Expect = 4.2e-237, P = 4.2e-237
Identities = 420/571 (73%), Positives = 509/571 (89%)
Query: 18 STAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIAL 77
+TAIL RKK N L+VD+AINDDNSV+ ++ +TM+KL+ FRGDT+L+KGKKRKDTV I L
Sbjct: 23 ATAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVL 82
Query: 78 ADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFD 137
DD E+ R+N+VVR+NLR+RLGD+V++H C D+KY R+ +LP+ DTIEG+TGNLFD
Sbjct: 83 IDDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFD 142
Query: 138 AYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRE 197
+LKPYF EAYRPVRKGD F+VRGGMR VEFKV++ +P EY VVA DT I EGEP+ RE
Sbjct: 143 VFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINRE 202
Query: 198 DE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
DE N ++EVGYDD+GG RKQMAQIRE+VELPLRHPQLFK+IG+KPP+G+L+YGPPG+GKT
Sbjct: 203 DEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKT 262
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
L+ARAVANETGAFFF INGPE+MSK+AGESESNLRKAFEEAEKNAP+IIFIDEIDSIAPK
Sbjct: 263 LMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPK 322
Query: 317 REKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
R+KT+GEVERR+VSQLLTLMDG+K+R++V+VI ATNRPNSIDPALRRFGRFDRE+DIG+P
Sbjct: 323 RDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIP 382
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
D GRLEVLRIHTKNMKL+DDVDLE +A +THGYVGAD+A+LC+EAA+Q IREKMD+IDL
Sbjct: 383 DATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDL 442
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+++ IDAE+L+S+ VT ++F+ ALG SNPSALRETVVE NV W+D+GGL+ +K EL+ET
Sbjct: 443 DEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKET 502
Query: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 556
V+YPV HP+++ KFG+SPSKGVLFYGPPG GKTLLAKA+A E ANFISVKGPELL+MW+
Sbjct: 503 VEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY 562
Query: 557 GESEANVREIFDKARQSAPCVLFFDELDSIA 587
GESE+N+R+IFDKAR +AP V+F DELDSIA
Sbjct: 563 GESESNIRDIFDKARAAAPTVVFLDELDSIA 593
Score = 528 (190.9 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
Identities = 108/257 (42%), Positives = 161/257 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DDVGG+ + +++E VE P+ HP + G+ P KG+L YGPPG+GKTL+A+AVA
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F + GPE++S GESESN+R F++A AP+++F+DE+DSIA R + G+
Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDA 603
Query: 325 ---ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+V+QLLT MDG+ ++ +V VIGATNRP+ IDPA+ R GR D+ I + +PDE R
Sbjct: 604 GGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENAR 663
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
L +L + L ++L IAK T G+ GADL + AA I++ ++ +
Sbjct: 664 LSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEK 723
Query: 442 DAEILNS-MAVTDEHFK 457
+ ++ + +TDE K
Sbjct: 724 EVKVEGEDVEMTDEGAK 740
Score = 39 (18.8 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 9 DAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVL 46
D+ KRD + +ER+ L + + + ++VVV+
Sbjct: 317 DSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVI 354
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 2284 (809.1 bits), Expect = 6.9e-237, P = 6.9e-237
Identities = 422/589 (71%), Positives = 514/589 (87%)
Query: 1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
M++ K K D STAIL+ K PNRL+VD++ DDNSV+ + M++L FRG
Sbjct: 1 MASVPTHQSEKEKKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRG 60
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
D +++KGKKRK++V I ++D++C K+RMN+VVR+NLR+RLGDVVS+ ++ YG R+
Sbjct: 61 DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI 120
Query: 120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
H+LP+DDTIEG+TGNLFD +LKPYF EAYRP+ KGD+F V+ MR+VEFKV+ET+P C
Sbjct: 121 HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPAC 180
Query: 180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+V+PDT I EG+P++RE+E ++++GYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG
Sbjct: 181 IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG 240
Query: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE 298
+KPP+GILL+GPPG+GKTLIARAVANETG+FFF INGPE+MSK++GESESNLRKAFEE E
Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECE 300
Query: 299 KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
KN P+I+FIDEID+IAPKREKT+GEVERRIVSQLLTLMDG+K R++++VI ATNRPNSID
Sbjct: 301 KNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
ALRRFGRFDREIDIG+PD VGRLE+LRIHTKNMKL+DDVDLE+IA + HG+VGADLA+L
Sbjct: 361 GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASL 420
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
C+EAALQ IREKM++IDLED+ IDAE+LNS+AVT E+F+ A G S+PSALRE VVE PN
Sbjct: 421 CSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNT 480
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANE
Sbjct: 481 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
CQANFIS+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA
Sbjct: 541 CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Score = 528 (190.9 bits), Expect = 2.3e-50, P = 2.3e-50
Identities = 105/253 (41%), Positives = 161/253 (63%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK----THG 322
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE R
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRH 661
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV-IDLEDETI 441
++L+ + LS D+DL +AK+T G+ GADL +C A IRE ++ I +E E
Sbjct: 662 QILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Query: 442 DAEILNSMAVTDE 454
D + + D+
Sbjct: 722 DRQARGEELMEDD 734
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 2284 (809.1 bits), Expect = 6.9e-237, P = 6.9e-237
Identities = 422/589 (71%), Positives = 514/589 (87%)
Query: 1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
M++ K K D STAIL+ K PNRL+VD++ DDNSV+ + M++L FRG
Sbjct: 1 MASVPTHQSEKEKKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRG 60
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
D +++KGKKRK++V I ++D++C K+RMN+VVR+NLR+RLGDVVS+ ++ YG R+
Sbjct: 61 DAVILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRI 120
Query: 120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
H+LP+DDTIEG+TGNLFD +LKPYF EAYRP+ KGD+F V+ MR+VEFKV+ET+P C
Sbjct: 121 HVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPAC 180
Query: 180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+V+PDT I EG+P++RE+E ++++GYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG
Sbjct: 181 IVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG 240
Query: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE 298
+KPP+GILL+GPPG+GKTLIARAVANETG+FFF INGPE+MSK++GESESNLRKAFEE E
Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECE 300
Query: 299 KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
KN P+I+FIDEID+IAPKREKT+GEVERRIVSQLLTLMDG+K R++++VI ATNRPNSID
Sbjct: 301 KNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSID 360
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
ALRRFGRFDREIDIG+PD VGRLE+LRIHTKNMKL+DDVDLE+IA + HG+VGADLA+L
Sbjct: 361 GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASL 420
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
C+EAALQ IREKM++IDLED+ IDAE+LNS+AVT E+F+ A G S+PSALRE VVE PN
Sbjct: 421 CSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNT 480
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANE
Sbjct: 481 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 540
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
CQANFIS+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA
Sbjct: 541 CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Score = 528 (190.9 bits), Expect = 2.3e-50, P = 2.3e-50
Identities = 105/253 (41%), Positives = 161/253 (63%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK----THG 322
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE R
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRH 661
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV-IDLEDETI 441
++L+ + LS D+DL +AK+T G+ GADL +C A IRE ++ I +E E
Sbjct: 662 QILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Query: 442 DAEILNSMAVTDE 454
D + + D+
Sbjct: 722 DRQARGEELMEDD 734
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
Identities = 271/314 (86%), Positives = 298/314 (94%)
Query: 274 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLL 333
+GPEIMSKLAGESESNLRKAFEEAEKNAP+IIFIDE+D+IAPKREKTHGEVERRIVSQLL
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 61
Query: 334 TLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK 393
TLMDGLK RAHVIV+ ATNRPNSIDPALRRFGRFDRE+DIG+PD GRLE+L+IHTKNMK
Sbjct: 62 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 121
Query: 394 LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTD 453
L+DDVDLE++ +THG+VGADLAALC+EAALQ IR+KMD+IDLEDETIDAE++NS+AVT
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTM 181
Query: 454 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 513
+ F+ AL SNPSALRETVVEVP V WEDIGGLE+VKRELQE VQYPVEHP+KF KFGM+
Sbjct: 182 DDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT 241
Query: 514 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 573
PSKGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQ+
Sbjct: 242 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 301
Query: 574 APCVLFFDELDSIA 587
APCVLFFDELDSIA
Sbjct: 302 APCVLFFDELDSIA 315
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 104/240 (43%), Positives = 160/240 (66%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 197 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 256
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 257 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 316
Query: 316 KREKTHGE---VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 317 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 376
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVDL+ +AK T+G+ GADL +C A IRE ++
Sbjct: 377 IPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 436
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 1100 (392.3 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 211/423 (49%), Positives = 300/423 (70%)
Query: 172 ETDPPEYCVVAPDTEI-FCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRH 230
+++ + ++ T + F + ++ N+L +V YD +GG+ Q+ +IRE++ELPL+
Sbjct: 308 QSNTDTFYFISSKTRVSFTKNRTNSKDQANQL-KVTYDMIGGLNSQLKEIREIIELPLKQ 366
Query: 231 PQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNL 290
P+LFKS G+ PP+G+LLYGPPG+GKT+IARAVANE GA+ INGPEI+SK GE+E+ L
Sbjct: 367 PELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARL 426
Query: 291 RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRA---HVIV 347
R+ F EA PSIIFIDE+D++ PKRE EVE+R+V+ LLTLMDG+ S V+V
Sbjct: 427 RQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLV 486
Query: 348 IGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK-LSDDVDLERIAKD 406
+GATNRP+++D ALRR GRFD+EI+IGVP+ RL++L+ + + L + +L ++A
Sbjct: 487 LGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANS 546
Query: 407 THGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
HGYVGADL ALC EA L +R V+ + D+++ + +T + F + PS
Sbjct: 547 AHGYVGADLKALCNEAGLHALRR---VLRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPS 603
Query: 467 ALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526
A+RE V+VPNV+W DIGGLENVK +L++ V++P++HPE F + G+ P KGVL YGPPGC
Sbjct: 604 AMREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGC 663
Query: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
KT++AKA+ANE NF+++KGPEL+ + GESE VREIF KAR AP ++FFDELD++
Sbjct: 664 SKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDAL 723
Query: 587 ATQ 589
A +
Sbjct: 724 AVE 726
Score = 406 (148.0 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
Identities = 77/165 (46%), Positives = 114/165 (69%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 606 REVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSK 665
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A
Sbjct: 666 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 725
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
+R + G V R+++QLLT MDG++ +V ++ ATNRP+ ID
Sbjct: 726 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
Score = 80 (33.2 bits), Expect = 9.7e-118, Sum P(2) = 9.7e-118
Identities = 30/116 (25%), Positives = 50/116 (43%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVD---EAIND------DNSVVVLHPDTM 51
++ AE+ + + FS AP LVV E ++D NS+V L +TM
Sbjct: 7 LNQSAENGSSSASAASFSKGATASAVAPGTLVVINFLEKVDDKVPKAFQNSLVQLGLNTM 66
Query: 52 EKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
+ G +L+ K V A K+ +++V + N+ VR+GD + V
Sbjct: 67 KSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEVAQKNVGVRVGDAIHV 122
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 1100 (392.3 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 207/398 (52%), Positives = 291/398 (73%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
++ +N+L +V YD +GG+ Q+ +IRE++ELPL+ P+LFKS G+ PP+G+LLYGPPG+GK
Sbjct: 336 KDQDNQL-KVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGK 394
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IARAVANE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFIDE+D++ P
Sbjct: 395 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 454
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREID 372
KRE EVE+R+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR GRFD+EI+
Sbjct: 455 KREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIE 514
Query: 373 IGVPDEVGRLEVLRIHTKNMK-LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
IGVP+ RL++L+ + + L + +L ++A HGYVGADL ALC EA L +R
Sbjct: 515 IGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRR-- 572
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
V+ + D+++ + +T + F + PSA+RE ++VPNV+W DIGGLEN+K
Sbjct: 573 -VLRKQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKL 631
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L++ V++P++HPE F + G+ P KGVL YGPPGC KT++AKA+ANE NF+++KGPEL
Sbjct: 632 KLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 691
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ + GESE VREIF KAR AP ++FFDELD++A +
Sbjct: 692 MNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVE 729
Score = 408 (148.7 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 79/170 (46%), Positives = 115/170 (67%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 609 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSK 668
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A
Sbjct: 669 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 728
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
+R + G V R+++QLLT MDG++ V ++ ATNRP+ ID L R
Sbjct: 729 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKELLR 778
Score = 62 (26.9 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 28/114 (24%), Positives = 46/114 (40%)
Query: 3 NQA-ESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDD--------NSVVVLHPDTMEK 53
NQ+ E+S + F A LVV + D NS+V L +TM+
Sbjct: 11 NQSTENSSPSASAASFPEGATASAVAAGTLVVINFLEKDDKVPKTFQNSLVQLGLNTMKS 70
Query: 54 LQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
G +L+ K V A K+ ++++ + N+ VR+GD + V
Sbjct: 71 ANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVRVGDAIHV 124
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 1097 (391.2 bits), Expect = 8.7e-115, Sum P(2) = 8.7e-115
Identities = 207/397 (52%), Positives = 289/397 (72%)
Query: 197 EDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
E+E+ +V YD +GG+ Q+ IRE++ELPL+ P+LFKS G+ PP+G+LLYGPPG+GKT
Sbjct: 342 EEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 401
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
+IARAVANE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFIDE+D++ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 317 REKTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREIDI 373
RE EVE+R+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR GRFD+EI+I
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Query: 374 GVPDEVGRLEVL-RIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
GVP+ RL++L ++ + L +V+L ++A HGYVGADL ALC EA L +R
Sbjct: 522 GVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR--- 578
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRE 492
V++ + D+++ + +T F + PSA+RE ++VPNV+W DIGGLEN+K +
Sbjct: 579 VLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLK 638
Query: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552
L++ V++P++HPE F + G+ P KGVL YGPPGC KT++AKA+ANE NF+++KGPEL+
Sbjct: 639 LKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Query: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ GESE VREIF KAR +P ++FFDELD++A +
Sbjct: 699 NKYVGESERAVREIFRKARAVSPSIIFFDELDALAIE 735
Score = 535 (193.4 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
Identities = 115/272 (42%), Positives = 169/272 (62%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSK 674
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAI 734
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
+R + G V R+++QLLT MDG++ V ++ ATNRP+ ID AL R GR DR I +
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYV 794
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV 433
+PD R E+L + +M +S+DV+L+ + T Y GA++ A+C EAAL + E
Sbjct: 795 PLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEE---- 850
Query: 434 IDLEDETIDAEILNSMAVTDEHFKTALGTSNP 465
D++ NS +T HF AL T P
Sbjct: 851 -DIQ--------ANS--ITRRHFTRALSTVTP 871
Score = 55 (24.4 bits), Expect = 8.7e-115, Sum P(2) = 8.7e-115
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 29 NRLVVDEAIND--DNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPK 86
N L +D+ + N +V L +TM+ G +L+ K V A K
Sbjct: 50 NFLEMDDKVPKTFQNFLVQLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGK 109
Query: 87 IRMNKVVRSNLRVRLGDVVSV 107
+ ++++ + N+ V++GD + V
Sbjct: 110 VGLSEMAQKNVGVKVGDAIQV 130
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 1078 (384.5 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 208/432 (48%), Positives = 301/432 (69%)
Query: 164 RSVEFKV-IETDPPEYCVVAPDTEI-FCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIR 221
R ++F + + + + ++ T + F E + +E +N+ +V YD +GG+ Q+ IR
Sbjct: 308 RLLKFSIGAKCNTDTFYFISSTTRVNFTEIDKNSKEQDNQF-KVTYDMIGGLSSQLKAIR 366
Query: 222 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 281
E++ELPL+ P+LFKS G+ P+G+LLYGPPG+GKT+IARAVANE GA+ INGPEI+SK
Sbjct: 367 EIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISK 426
Query: 282 LAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS 341
GE+E+ LR+ F EA PSIIFIDE+D++ PKRE EVE+R+V+ LLTLMDG+ S
Sbjct: 427 FYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGS 486
Query: 342 RA---HVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK-LSDD 397
V+V+GATNRP+++D ALRR GRFD+EI+IGVP+ RL++L+ + + L +
Sbjct: 487 EVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTE 546
Query: 398 VDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFK 457
+L ++A HGYVGADL LC EA L +R ++ + D ++ + +T + F
Sbjct: 547 AELLQLANSAHGYVGADLKVLCNEAGLCALRR---ILKKQPNLPDVKVAGLVKITLKDFL 603
Query: 458 TALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKG 517
A+ PSA+RE ++VPNV+W DIGGLE++K +L++ V++P++HPE F + G+ P KG
Sbjct: 604 QAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKG 663
Query: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCV 577
VL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GESE VRE F KAR AP +
Sbjct: 664 VLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSI 723
Query: 578 LFFDELDSIATQ 589
+FFDELD++A +
Sbjct: 724 IFFDELDALAVE 735
Score = 535 (193.4 bits), Expect = 1.9e-54, Sum P(2) = 1.9e-54
Identities = 105/236 (44%), Positives = 155/236 (65%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++ + VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 615 REIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSK 674
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAV 734
Query: 316 KREKT--HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
+R + G V R+++QLLT MDG++ V ++ ATNRP+ ID AL R GR DR I +
Sbjct: 735 ERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYV 794
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD R E+ ++ +M +S++VDL+ + T Y GA++ A+C EAAL + E
Sbjct: 795 PLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE 850
Score = 58 (25.5 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 33 VDEAIND--DNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMN 90
VD+ I NS++ L +TM+ G +L+ K V A K+ ++
Sbjct: 55 VDDKIPKTFQNSLIHLGLNTMKSANICIGRPVLLTSLNGKQEVYTAWPMAGFPGGKVGLS 114
Query: 91 KVVRSNLRVRLGDVVSV 107
++ + N+ VR GD + V
Sbjct: 115 EMAQKNVGVRPGDAIQV 131
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 1080 (385.2 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 204/398 (51%), Positives = 286/398 (71%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
+E +++ +V YD +GG+ Q+ IRE++ELPL+ P+LFKS G+ P+G+LLYGPPG+GK
Sbjct: 342 KEQDSQF-KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGK 400
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IARAVANE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFIDE+D++ P
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREID 372
KRE EVE+R+V+ LLTLMDG+ S V+V+GATNRP ++D ALRR GRFD+EI+
Sbjct: 461 KREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 373 IGVPDEVGRLEVLRIHTKNMK-LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
IG+P+ RL++L+ + + L +L R+A + HGYVGADL ALC EA L +R
Sbjct: 521 IGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRR-- 578
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
V+ + D+++ + +T F + PSA+RE ++VPNV+W DIGGLEN+K
Sbjct: 579 -VLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKL 637
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L++ V++P++HP+ F + G+ P KGVL YGPPGC KT++AKA+ANE NF+++KGPEL
Sbjct: 638 KLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ + GESE VREIF KAR AP ++FFDELD++A +
Sbjct: 698 MNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVE 735
Score = 545 (196.9 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 110/243 (45%), Positives = 160/243 (65%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSK 674
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 734
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
+R + G V R+++QLLT MDG++ +V V+ ATNRP+ ID AL R GR DR I +
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYV 794
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE--KM 431
+PD R E+L + +M +S++VDL+ + T Y GA++ A+C EAAL + E K
Sbjct: 795 PLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKA 854
Query: 432 DVI 434
D I
Sbjct: 855 DCI 857
Score = 55 (24.4 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVR 100
NS+V L +TM+ G +L+ K V A K+ ++++ + N+ VR
Sbjct: 64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVR 123
Query: 101 LGDVVSV 107
G+ + V
Sbjct: 124 AGETIQV 130
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 1078 (384.5 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 203/398 (51%), Positives = 286/398 (71%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
+E +++ +V YD +GG+ Q+ IRE++ELPL+ P+LFKS G+ P+G+LLYGPPG+GK
Sbjct: 342 KEQDSQF-KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGK 400
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IARAVANE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFIDE+D++ P
Sbjct: 401 TMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCP 460
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREID 372
KRE EVE+R+V+ LLTLMDG+ S V+V+GATNRP ++D ALRR GRFD+EI+
Sbjct: 461 KREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIE 520
Query: 373 IGVPDEVGRLEVLRIHTKNMK-LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
IG+P+ RL++L+ + + L +L R+A + HGYVGADL ALC EA L +R
Sbjct: 521 IGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRR-- 578
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
V+ + D+++ + +T F + PSA+RE ++VPNV+W DIGGLEN+K
Sbjct: 579 -VLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKL 637
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L++ V++P++HP+ F + G+ P KGVL YGPPGC KT++AKA+ANE NF+++KGPEL
Sbjct: 638 KLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ + GESE VRE+F KAR AP ++FFDELD++A +
Sbjct: 698 MNKYVGESERAVREVFRKARAVAPSIIFFDELDALAVE 735
Score = 406 (148.0 bits), Expect = 6.0e-37, Sum P(3) = 6.0e-37
Identities = 78/165 (47%), Positives = 114/165 (69%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSK 674
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAV 734
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
+R + G V R+++QLLT MDG++ +V V+ ATNRP+ ID
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Score = 51 (23.0 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVR 100
NS+V L +TM+ G +L+ K V A K+ ++++ + N+ V+
Sbjct: 64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVK 123
Query: 101 LGDVVSV 107
G+ + V
Sbjct: 124 AGETIRV 130
Score = 38 (18.4 bits), Expect = 6.0e-37, Sum P(3) = 6.0e-37
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 415 LAALCTEAALQCIRE--KMDVI 434
+ A+C EAAL + E K D I
Sbjct: 781 IIAVCKEAALLALEENIKADCI 802
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 1065 (380.0 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 209/414 (50%), Positives = 285/414 (68%)
Query: 181 VAPDTEI-FCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV 239
++ T I F E ED + +V YD +GG+ Q+ IRE VELPL+ +LFKS G+
Sbjct: 290 ISSRTRINFIEARMNIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGI 349
Query: 240 KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK 299
PP+G+LLYGPPG+GKTLIA+A+ANE GA INGPEI+SK GESES LR+ F EA
Sbjct: 350 SPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASL 409
Query: 300 NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNS 356
PSIIFIDE+D++ PKRE EVE+R+V+ LLTLMDG+ S ++V+GATNRP++
Sbjct: 410 RRPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHA 469
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLS-DDVDLERIAKDTHGYVGADL 415
+D ALRR GRFD+EI+IG+P+ RL++L+ K + S ++ ++A HGYVGADL
Sbjct: 470 LDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADL 529
Query: 416 AALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV 475
AALC EA L +R + D E+ S+ + F + PSA+RE V+V
Sbjct: 530 AALCKEAGLYALRR---ALGKRAHPSDTEVAGSVMIAFNDFLQGMKDVRPSAMREVAVDV 586
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P V+W DIGGLE+VK +L++ V++P++HP+ F + G+ P KGVL YGPPGC KT++AKA+
Sbjct: 587 PKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKAL 646
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+E NF++VKGPEL+ + GESE VREIF KAR +P +LFFDE+D++A +
Sbjct: 647 AHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVE 700
Score = 310 (114.2 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 56/122 (45%), Positives = 86/122 (70%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V + D+GG+ ++++ VE PL+HP F +G++PPKG+LLYGPPG K
Sbjct: 580 REVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSK 639
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T+IA+A+A+E+G F + GPE+M+K GESE +R+ F +A +PSI+F DEID++A
Sbjct: 640 TMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAV 699
Query: 316 KR 317
+R
Sbjct: 700 ER 701
Score = 53 (23.7 bits), Expect = 3.4e-111, Sum P(2) = 3.4e-111
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 49 DTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSV 107
++M+ G +L+ + VC A KI ++ + NL V +GD V+V
Sbjct: 44 NSMKAANICIGRPVLLTAAGGRQEVCTAWPTPGFPGGKIGLSDTTQKNLGVSVGDAVTV 102
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 197/383 (51%), Positives = 274/383 (71%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + +GG++ Q+AQIR++VELP ++P+LFK + PP+G+LLYGPPG+GKT++ RAVA
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F I+GP ++ K GE+ES LRK FE+A + PSIIFIDEID++APKR + E
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEA 395
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
E R V+ LLTL+DG+ + V+VI ATNRPNSID ALRR GR ++EI+IG+PD+ RL++
Sbjct: 396 ESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDI 455
Query: 385 LRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443
+++ + +D LE +A TH YVGADLAA+ EAAL+ I+ I L+ +T
Sbjct: 456 IKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKR---TISLQKDTSGL 512
Query: 444 EILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEH 503
+I ++ + D F AL + SA+RE ++E PNV+W DIGG E VK++L+E+V++P+ H
Sbjct: 513 DIFGAVQMDDLEF--ALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTH 570
Query: 504 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 563
E F + G+ P KGVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GESE V
Sbjct: 571 GETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAV 630
Query: 564 REIFDKARQSAPCVLFFDELDSI 586
R++F KARQ++P V+FFDE+D++
Sbjct: 631 RQVFQKARQASPSVIFFDEIDAL 653
Score = 526 (190.2 bits), Expect = 3.8e-50, P = 3.8e-50
Identities = 99/232 (42%), Positives = 154/232 (66%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG + +++E VE PL H + F +GV+PPKG+LLYGPPG KT+ A+A+A
Sbjct: 545 VHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIAT 604
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
ETG F + GPE+ K GESE +R+ F++A + +PS+IF DEID++ R + +
Sbjct: 605 ETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS- 663
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
R+V+ LL +DG+++ +V+V+ ATNRP+ IDPAL R GR DR + +G P+ R ++
Sbjct: 664 -DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQI 722
Query: 385 LRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
++I + MK ++DVDL+ IA+ T G GA++ ALC EA L + E ++ ++
Sbjct: 723 VKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEI 774
Score = 252 (93.8 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 43/110 (39%), Positives = 74/110 (67%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V + IGGL+ ++++ V+ P ++PE F+ F + P +GVL YGPPG GKT++ +A+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E A ++ GP ++ + GE+E+ +R+IF+ AR P ++F DE+D++A
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALA 385
Score = 238 (88.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 57/134 (42%), Positives = 84/134 (62%)
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R+V+ LL +DG+++ +V+V+ ATNRP+ IDPAL R GR DR + +G P+ R ++++
Sbjct: 665 RVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVK 724
Query: 387 IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEIL 446
I + MK ++DVDL+ IA+ T G GA++ ALC EA L + E DLE + EI
Sbjct: 725 IQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHE-----DLEAK----EIC 775
Query: 447 NSMAVTDEHFKTAL 460
+ HFKTAL
Sbjct: 776 QA------HFKTAL 783
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 236/597 (39%), Positives = 346/597 (57%)
Query: 18 STAILERKKAPNRLVVDEAINDDN-SV--VVLHPDTMEKLQFFRGDTILIKGKKRKDTVC 74
STA ++ K P +V + +N SV V ++P+ + ++ G+ +L+
Sbjct: 20 STAPAKKIKIPKSFIVRPNVPTNNKSVANVYINPEILSAMELNNGNLVLVSSSDSGSAGV 79
Query: 75 IAL---ADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADV-KYGKRVHILPVDDTI-E 129
+A ++D ++ I ++ R + LGD V + + + +Y + I V++T+ E
Sbjct: 80 VATVYSSNDIVDKNVITISFPYRQLCGLLLGDRVELVKFMNQPQYASDISISGVEETVTE 139
Query: 130 GVTGNLFD---AYLKPYFTEAYRPVRKGDLF-LVRGGMRSVEFK------VIETDPPEYC 179
V L D Y + + D+ + M + K + T P Y
Sbjct: 140 DVRSALLDIGLVYPGLQINVDNKRITIVDVNDSLDASMDKLSIKDSDSLLSVHTVSPPY- 198
Query: 180 VVAPDTEI--FCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI 237
+ +P T I P R + N ++ YD VGG+ KQ+ ++ +ELPL +P LF
Sbjct: 199 LFSPTTSINVATSSFPARSKYPNLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDF 258
Query: 238 GVKPPKGILLYGPPGSGKTLIARAVANE-TGAFFFCINGPEIMSKLAGESESNLRKAFEE 296
G+ PP+GILL+GPPG+GKT++ R VAN T A INGP I+SK GE+E+ +R F E
Sbjct: 259 GISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNE 318
Query: 297 AEKNAPSIIFIDEIDSIAPKREKTH-GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPN 355
A+K PSIIF+DEIDSIAP R GE E R+V+QLLT+MDG+ ++VIGATNRPN
Sbjct: 319 AKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPN 378
Query: 356 SIDPALRRFGRFDREIDIGVPDEVGRLEVL-----RIHTKNMKLSDDVDLERIAKDTHGY 410
SID ALRR GRFD+E++IG+PD R E+L +++++ +++ + ++ IA THGY
Sbjct: 379 SIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKE-EIASIASKTHGY 437
Query: 411 VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
VGADL ALC E+ ++ I + V + I + V D + AL PSA+RE
Sbjct: 438 VGADLTALCRESVMKAINRGLTV-GIPQTAI------KVTVDDVYH--ALPEIRPSAMRE 488
Query: 471 TVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
+E+P V+W DIGG E +KR+L E VQ P+E + F+ G+S KGVL YGPPGC KTL
Sbjct: 489 IFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTL 548
Query: 531 LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
AKA+A E NF++VKGPE+ + GESE +REIF KAR ++P ++FFDE+D+IA
Sbjct: 549 TAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIA 605
Score = 483 (175.1 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 104/264 (39%), Positives = 160/264 (60%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V + D+GG + ++ E+V+LPL FK++GV PKG+LLYGPPG K
Sbjct: 487 REIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSK 546
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL A+A+A E+G F + GPEI +K GESE +R+ F +A +PSIIF DEID+IA
Sbjct: 547 TLTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAG 606
Query: 316 KRE-KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
R+ + +++ LL +DG++ V+++GATN+P IDPAL R GR DR I +
Sbjct: 607 DRDGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVA 666
Query: 375 VPDEVGRLEVLRIHTK--NMKLSDD-VDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
PD RL++L+ ++ N++ D+ VDL+++A+ T G GA++ LC EA L I E
Sbjct: 667 PPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENK 726
Query: 432 DVIDLEDETIDAEILN-SMAVTDE 454
+ + ++ + + S +T E
Sbjct: 727 EATTVTNKHFEHALKGISRGITPE 750
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 212/507 (41%), Positives = 318/507 (62%)
Query: 3 NQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAI-NDDNSVVVLHPDTMEKLQFFRGDT 61
N+ + +F L+ K P +V+ N DN + + + M++L G T
Sbjct: 314 NEKTQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGAT 373
Query: 62 ILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHI 121
+L+KGKK+++ + IA D + ++ + ++ ++ NLR+ D++ +H + K + V +
Sbjct: 374 VLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVL 433
Query: 122 LPVDDTIEGVTGN-LFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVI-----ETDP 175
P DTI ++ L A + PY +Y+P+R + +EFKV+ E++
Sbjct: 434 SPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESEN 493
Query: 176 PEYCVVAPDTEIFCEGEPVRRED-ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLF 234
E+ + +++ E ++RED E D++ Y+D+GG++KQ+ +IREL+ELPL++P++F
Sbjct: 494 EEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIF 553
Query: 235 KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 294
SIG+ PKG+L++G PG+GKT IA+A+ANE+ A+ + INGPEIMSK GESE LRK F
Sbjct: 554 MSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIF 613
Query: 295 EEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
++A + P IIFIDEIDSIA KR K++ E+E+R+VSQLLTLMDGLK +V+V+ ATNRP
Sbjct: 614 KKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRP 673
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGAD 414
NSIDPALRRFGRFDREI+I VPDE GR E+L TK MKL DV+L +IAK+ HGYVGAD
Sbjct: 674 NSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGAD 733
Query: 415 LAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVE 474
LA LC EAA+QCI+E + +DL++E + + M ++ + K +G + P T
Sbjct: 734 LAQLCFEAAIQCIKEHIHFLDLDEE----DFIEFMKISVDEDKKNMG-NEPYGSSHT--- 785
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPV 501
N N+ I L +L T +P+
Sbjct: 786 -NNSNY--INHLTESSNKLSYTNMFPL 809
Score = 539 (194.8 bits), Expect = 8.4e-51, P = 8.4e-51
Identities = 95/158 (60%), Positives = 124/158 (78%)
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
D +D + I A ILN + + +HF+ AL NPS+LRE V++P V W DIGG+ VK
Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L+ET+ YP+E+ + KF + +KG+L YGPPGCGKTLLAKAIANEC+ANFISVKGPEL
Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +
Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE 1042
Score = 506 (183.2 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 102/262 (38%), Positives = 161/262 (61%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + ++ V ++D+GG+ + Q++E + PL + L+ KGILLYGPPG GK
Sbjct: 922 RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGK 981
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P IIF DEIDS+A
Sbjct: 982 TLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAK 1041
Query: 316 KREK-THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
+R T+ + R+++Q+LT +DG+ + + +I ATNRP+ +D AL R GR D+ I I
Sbjct: 1042 ERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYIS 1101
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
+PD R + + KN L++DVD+ +AK T G+ GAD+ LC A + I+E + ++
Sbjct: 1102 LPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLL 1161
Query: 435 DL---EDETIDAEILNSMAVTD 453
++ E E + NS + D
Sbjct: 1162 NIRKKEQEEQRKKNKNSFKIDD 1183
Score = 282 (104.3 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
++ +ED+GG++ +++E ++ P+++PE F G+S KGVL +G PG GKT +AKAIA
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
NE A + GPE+++ GESE +R+IF KA + PC++F DE+DSIA +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 212/507 (41%), Positives = 318/507 (62%)
Query: 3 NQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAI-NDDNSVVVLHPDTMEKLQFFRGDT 61
N+ + +F L+ K P +V+ N DN + + + M++L G T
Sbjct: 314 NEKTQKGVNDKETNFLLKALDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGAT 373
Query: 62 ILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHI 121
+L+KGKK+++ + IA D + ++ + ++ ++ NLR+ D++ +H + K + V +
Sbjct: 374 VLLKGKKKREMLGIARLDRSLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVL 433
Query: 122 LPVDDTIEGVTGN-LFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVI-----ETDP 175
P DTI ++ L A + PY +Y+P+R + +EFKV+ E++
Sbjct: 434 SPFSDTIPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESEN 493
Query: 176 PEYCVVAPDTEIFCEGEPVRRED-ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLF 234
E+ + +++ E ++RED E D++ Y+D+GG++KQ+ +IREL+ELPL++P++F
Sbjct: 494 EEFGCIGEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIF 553
Query: 235 KSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAF 294
SIG+ PKG+L++G PG+GKT IA+A+ANE+ A+ + INGPEIMSK GESE LRK F
Sbjct: 554 MSIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIF 613
Query: 295 EEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
++A + P IIFIDEIDSIA KR K++ E+E+R+VSQLLTLMDGLK +V+V+ ATNRP
Sbjct: 614 KKASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRP 673
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGAD 414
NSIDPALRRFGRFDREI+I VPDE GR E+L TK MKL DV+L +IAK+ HGYVGAD
Sbjct: 674 NSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGAD 733
Query: 415 LAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVE 474
LA LC EAA+QCI+E + +DL++E + + M ++ + K +G + P T
Sbjct: 734 LAQLCFEAAIQCIKEHIHFLDLDEE----DFIEFMKISVDEDKKNMG-NEPYGSSHT--- 785
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPV 501
N N+ I L +L T +P+
Sbjct: 786 -NNSNY--INHLTESSNKLSYTNMFPL 809
Score = 539 (194.8 bits), Expect = 8.4e-51, P = 8.4e-51
Identities = 95/158 (60%), Positives = 124/158 (78%)
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
D +D + I A ILN + + +HF+ AL NPS+LRE V++P V W DIGG+ VK
Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L+ET+ YP+E+ + KF + +KG+L YGPPGCGKTLLAKAIANEC+ANFISVKGPEL
Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +
Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE 1042
Score = 506 (183.2 bits), Expect = 2.9e-47, P = 2.9e-47
Identities = 102/262 (38%), Positives = 161/262 (61%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + ++ V ++D+GG+ + Q++E + PL + L+ KGILLYGPPG GK
Sbjct: 922 RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGK 981
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P IIF DEIDS+A
Sbjct: 982 TLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAK 1041
Query: 316 KREK-THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
+R T+ + R+++Q+LT +DG+ + + +I ATNRP+ +D AL R GR D+ I I
Sbjct: 1042 ERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYIS 1101
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
+PD R + + KN L++DVD+ +AK T G+ GAD+ LC A + I+E + ++
Sbjct: 1102 LPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLL 1161
Query: 435 DL---EDETIDAEILNSMAVTD 453
++ E E + NS + D
Sbjct: 1162 NIRKKEQEEQRKKNKNSFKIDD 1183
Score = 282 (104.3 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
++ +ED+GG++ +++E ++ P+++PE F G+S KGVL +G PG GKT +AKAIA
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
NE A + GPE+++ GESE +R+IF KA + PC++F DE+DSIA +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 608 (219.1 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 126/256 (49%), Positives = 179/256 (69%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E + V ++D GG + + ++ +L+ + +RHP++++ +GV PP+G LL+GPPG GKTL+
Sbjct: 218 ELQFSSVKFEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLL 276
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A+AVA ET I+ PE++S ++GESE LR+ FE+A +AP I+FIDEID+I PKRE
Sbjct: 277 AQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPKRE 336
Query: 319 KTHGEVERRIVSQLLTLMDGLKSR---AHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L S A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 337 TASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGI 396
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
PDE R+++L+ + ++L DD D +A+ T GYVGADL ALC EAA+ + I
Sbjct: 397 PDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAVNR----IL 452
Query: 436 LEDETIDAEILNSMAV 451
LE T D +I ++A+
Sbjct: 453 LEPTTED-QITPTLAL 467
Score = 498 (180.4 bits), Expect = 4.5e-47, P = 4.5e-47
Identities = 108/299 (36%), Positives = 170/299 (56%)
Query: 179 CVVAPD-TEIFCEGEP-VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS 236
CV+ D + +P +RE + +V + DVG ++ ++ + P+++P+ FK+
Sbjct: 489 CVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKA 548
Query: 237 IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEE 296
+G+ P G+LL GPPG GKTL+A+AVAN +G F + GPE+++ GESE +R+ F+
Sbjct: 549 LGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQR 608
Query: 297 AEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
+AP +IF DEID++ P+R + R+V+QLLT MDG+++R V ++ ATNRP+
Sbjct: 609 GRNSAPCVIFFDEIDALCPRRSEHESGASVRVVNQLLTEMDGMENRRQVFIMAATNRPDI 668
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN---MKLSDDVDLERIAKDTH--GYV 411
IDPA+ R GR D+ + +G+P R +L TK +L DV LE IA D +
Sbjct: 669 IDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGTKPQLDSDVSLEEIAHDARCETFT 728
Query: 412 GADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
GADL+AL EA + +R +D E+ + V+ HF+ A PS ++
Sbjct: 729 GADLSALVREACVNALRVHLDPAQTHTESA-----KDIRVSRVHFEDAFKKVRPSVSKK 782
Score = 391 (142.7 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 72/147 (48%), Positives = 101/147 (68%)
Query: 440 TIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQY 499
++ + L ++ V F ++L PSA RE VP+V W D+G L++V+ EL +
Sbjct: 479 SLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVREELHMAIMA 538
Query: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
P+++PE+F+ G+S G+L GPPGCGKTLLAKA+AN NFISVKGPELL M+ GES
Sbjct: 539 PIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGES 598
Query: 560 EANVREIFDKARQSAPCVLFFDELDSI 586
E VR++F + R SAPCV+FFDE+D++
Sbjct: 599 ERAVRQVFQRGRNSAPCVIFFDEIDAL 625
Score = 273 (101.2 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 65/200 (32%), Positives = 108/200 (54%)
Query: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNS 448
T LSDD +++ + DL C E + ++ D LE E +
Sbjct: 137 TIQRSLSDDWIIDKTGDRGQESILIDL---CEEESSSTTNQR-DSSRLEKEKKSVKQKRQ 192
Query: 449 MA-VTDEHFKTALGT-SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 506
+E +T+ G + S ++ ++ +V +ED GG + E+ + + + + HPE
Sbjct: 193 KKNKLEEDSETSAGVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEV 251
Query: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
+++ G+ P +G L +GPPGCGKTLLA+A+A E + + PEL++ GESE +RE+
Sbjct: 252 YQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLREL 311
Query: 567 FDKARQSAPCVLFFDELDSI 586
F++A SAPC+LF DE+D+I
Sbjct: 312 FEQAISSAPCILFIDEIDAI 331
Score = 41 (19.5 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 368 DREIDIGVPDEVGRLEVLRIHTKNMKLSD----DVDLERIAK 405
D E GVP + +++ + ++K D D LE + K
Sbjct: 200 DSETSAGVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCK 241
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 199/417 (47%), Positives = 267/417 (64%)
Query: 176 PEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK 235
P + T I E N + + Y VGG+ K++ ++ +E+PL P LF
Sbjct: 213 PPFIFRKGSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFS 272
Query: 236 SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFE 295
S GV PP+GILL+GPPG+GKT++ R VAN + A INGP I+SK GE+E+ LR F
Sbjct: 273 SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFN 332
Query: 296 EAEKNAPSIIFIDEIDSIAPKREKTH-GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
EA K PSIIFIDEIDSIAP R GEVE R+V+ LLTLMDG+ + V+VI ATNRP
Sbjct: 333 EARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRP 392
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK----LSDDVDLERIAKDTHGY 410
NS+DPALRR GRFD+E++IG+PD R ++L M + D ++ IA THGY
Sbjct: 393 NSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGY 452
Query: 411 VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
VGADL ALC E+ ++ I+ + D ID S+ VT + ++A+ PSA+RE
Sbjct: 453 VGADLTALCRESVMKTIQRGLGT----DANIDKF---SLKVTLKDVESAMVDIRPSAMRE 505
Query: 471 TVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
+E+P V W DIGG E +K +++E +Q P+E E F + G+S KGVL YGPPGC KTL
Sbjct: 506 IFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTL 565
Query: 531 LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
AKA+A E NF++VKGPE+ + GESE +REIF KAR +AP ++FFDE+D+++
Sbjct: 566 TAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALS 622
Score = 520 (188.1 bits), Expect = 1.3e-49, P = 1.3e-49
Identities = 103/243 (42%), Positives = 150/243 (61%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V + D+GG + +++E+++LPL + F +G+ PKG+LLYGPPG K
Sbjct: 504 REIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSK 563
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL A+A+A E+G F + GPEI +K GESE +R+ F +A APSIIF DEID+++P
Sbjct: 564 TLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSP 623
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
R+ + +++ LL +DG++ V+++ ATNRP+ ID AL R GR DR I +G
Sbjct: 624 DRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGP 683
Query: 376 PDEVGRLEVLRIHTKNMKLSDD-VDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
PD RLE+L+ TK + VDL +A T GY GA++ LC EA L I E +DV
Sbjct: 684 PDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVA 743
Query: 435 DLE 437
+E
Sbjct: 744 KVE 746
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 584 (210.6 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 117/244 (47%), Positives = 167/244 (68%)
Query: 191 GEPVRREDENRL--DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 248
G ++ + NR ++ D+GG+ + ++ ELV +P++HP++++ G+ PP+G+LL+
Sbjct: 155 GSKRQKAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLH 214
Query: 249 GPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 308
GPPG GKT++A A+ANE G F I+ P I+S ++GESE +R+ FEEA+ AP ++FID
Sbjct: 215 GPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFID 274
Query: 309 EIDSIAPKREKTHGEVERRIVSQLLTLMDGL---KSRAH-VIVIGATNRPNSIDPALRRF 364
EID++ PKRE E+ERRIV+Q LT MD L K+ V+VIGATNRP+S+D ALRR
Sbjct: 275 EIDAVTPKRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRA 334
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
GRFDREI + VP + R ++LR K +KLS D D ++AK T GYVGADL AL A +
Sbjct: 335 GRFDREICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGI 394
Query: 425 QCIR 428
I+
Sbjct: 395 IAIK 398
Score = 532 (192.3 bits), Expect = 5.3e-51, P = 5.3e-51
Identities = 107/276 (38%), Positives = 172/276 (62%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V ++++G ++ +++ + P++ P+L++S+G+ P G+LL+GPPG G
Sbjct: 479 KREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCG 538
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+ A F I GPE+++K GESE +R+ F A ++P +IF DE+D++
Sbjct: 539 KTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMV 598
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R+ + E R+V+ LLT +DGL R+ V VI ATNRP+ IDPA+ R GR D+ + +
Sbjct: 599 PRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVD 658
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTH--GYVGADLAALCTEAALQCIREKM- 431
+PD R+E+L+ TK L ++V+L+ + +D + GADLAAL EAA+ +R +
Sbjct: 659 LPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVF 718
Query: 432 -DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
D+ E E L + VT+ F+ A PS
Sbjct: 719 ADIASNEPEITQHSALEPIRVTNADFELAFKNIKPS 754
Score = 396 (144.5 bits), Expect = 1.3e-96, Sum P(2) = 1.3e-96
Identities = 73/153 (47%), Positives = 106/153 (69%)
Query: 434 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 493
++ + + E L +A+ + F AL PS+ RE VP V+W +IG L++++ EL
Sbjct: 445 LNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVEL 504
Query: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 553
Q + P++ PE ++ G+S GVL +GPPGCGKTLLAKA+ANE +ANFIS++GPELL
Sbjct: 505 QMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLN 564
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ GESE VR++F +AR S+PCV+FFDELD++
Sbjct: 565 KYVGESERAVRQVFLRARASSPCVIFFDELDAM 597
Score = 315 (115.9 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 76/214 (35%), Positives = 124/214 (57%)
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
V +++ + L + +M+ D +L + KDT+ + + +L + L+ ++D
Sbjct: 76 VEEKLASSQDLVLVDSDMEEQSDSNLMEV-KDTN-VINKSITSLWSSPNLK----EIDGE 129
Query: 435 DLEDETIDAE-ILNSMAVTDEHFKTALGTSNPSALRETVVEVPN-VNWEDIGGLENVKRE 492
D E +++ E I S D KT G+ A E E P+ ++ DIGGL++ E
Sbjct: 130 D-EKKSVGQESITGSAKRKDRRSKTN-GSKRQKA--EANREPPSDISLSDIGGLDDCINE 185
Query: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552
L E V P++HPE ++ G+ P +GVL +GPPGCGKT+LA A+ANE FIS+ P ++
Sbjct: 186 LLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIV 245
Query: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ GESE VRE+F++A+ APC++F DE+D++
Sbjct: 246 SGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAV 279
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 566 (204.3 bits), Expect = 8.7e-96, Sum P(2) = 8.7e-96
Identities = 127/273 (46%), Positives = 175/273 (64%)
Query: 165 SVEFKVIETDPPEYCVVAPDTEIFCEGE-PVRRED--ENRLD-EVGYDDVGGVRKQMAQI 220
SV + ETD P+ V + EG V+R+ E+R +GG+ +AQ+
Sbjct: 158 SVSESITETDDPKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQL 217
Query: 221 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 280
EL+ LP+ HP++F S GV+PP+G+LL+GPPG GKT IA A+A E F I+ P ++S
Sbjct: 218 MELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVS 277
Query: 281 KLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-THGEVERRIVSQLLTLMDGL 339
++GESE +R F+EA AP ++F DEID+I PKR+ E+ERRIV+QLLT MD L
Sbjct: 278 GMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDEL 337
Query: 340 ---KSRAH-VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLS 395
K+ VI+IGATNRP+S+D ALRR GRFDREI + VP+EV RL +L+ + N+K+
Sbjct: 338 TMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKID 397
Query: 396 DDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428
+D ++AK T G+VGADL AL T A I+
Sbjct: 398 GAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430
Score = 511 (184.9 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 113/320 (35%), Positives = 193/320 (60%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + +V + +VG +++ ++ + P++ P+L++ +G+ P G+LL+GPPG G
Sbjct: 520 KREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCG 579
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+ A F I GPE+++K GESE ++R+ F A + P +IF DE+D++
Sbjct: 580 KTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALV 639
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R+ + E R+V+ LLT +DGL R + VIGATNRP+ IDPA+ R GR D+ + I
Sbjct: 640 PRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIE 699
Query: 375 VPDEVGRLEVLRIHTKN--MKLSDDVDLERIAKDT--HGYVGADLAALCTEAALQCIREK 430
+P+ +L++++ TK+ LS DVD E I ++ + + GADLAAL E+++ ++ K
Sbjct: 700 LPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRK 759
Query: 431 M----DVIDLEDETIDAEILN-SMAVTDEH-------FKTALGTSNPSALRETVVEVPNV 478
++ + D +D E + S+ V+ E F++AL PS + ++ +
Sbjct: 760 FFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLKYDRL 819
Query: 479 NWEDIGGLENVKRELQETVQ 498
N + +G E +K + +E Q
Sbjct: 820 N-KKMGLTEEMK-DAEEMKQ 837
Score = 412 (150.1 bits), Expect = 8.7e-96, Sum P(2) = 8.7e-96
Identities = 76/148 (51%), Positives = 105/148 (70%)
Query: 439 ETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQ 498
E + E L+ +++ E F AL T P+A RE VP+V W ++G L+ V+ EL +
Sbjct: 491 EPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIV 550
Query: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 558
P++ PE +EK G+S GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL + GE
Sbjct: 551 QPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGE 610
Query: 559 SEANVREIFDKARQSAPCVLFFDELDSI 586
SE ++R++F +AR S PCV+FFDELD++
Sbjct: 611 SERSIRQVFTRARASVPCVIFFDELDAL 638
Score = 299 (110.3 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 52/111 (46%), Positives = 78/111 (70%)
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
PN + + +GG+++V +L E + P+ HPE F G+ P +GVL +GPPGCGKT +A A+
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A E Q FIS+ P +++ GESE +R++FD+AR APC++FFDE+D+I
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAI 310
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 570 (205.7 bits), Expect = 3.2e-95, Sum P(2) = 3.2e-95
Identities = 118/278 (42%), Positives = 180/278 (64%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
+ E ++ V ++DVGG + ++ +++ + +RHP++++ +GV PP+G+LL+GPPG GK
Sbjct: 252 KSTELQISSVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A A+A E + PEI+S ++GESE LR F++A NAP I+FIDEID+I P
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITP 370
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREID 372
KRE ++ERRIV+QLLT MD L + A V+V+GATNRP+S+DPALRR GRFDRE+
Sbjct: 371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVC 430
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
+G+PDE R +L+ + ++L + + +A T G+VGADL ALC EAA+ C ++
Sbjct: 431 LGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAV-CAVHRVL 489
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
+ E + + E + E ++ LG PS ++
Sbjct: 490 MRRQEQQRTEPET-GGLPSDGEQGRS-LGAEPPSETQD 525
Score = 516 (186.7 bits), Expect = 7.2e-49, P = 7.2e-49
Identities = 113/283 (39%), Positives = 174/283 (61%)
Query: 190 EGEP-VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 248
E +P +RE + V + DVG + ++ + P+R+P+ F+++G+ P G+LL
Sbjct: 561 EVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLA 620
Query: 249 GPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFID 308
GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF D
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 680
Query: 309 EIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFD 368
E+D++ P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D
Sbjct: 681 EVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLD 740
Query: 369 REIDIGVPDEVGRLEVLRIHTKN-MK--LSDDVDLERIAKDTHG--YVGADLAALCTEAA 423
+ + +G+P R+ +L+ TKN K L +DVDLE IA D Y GADL+AL EA+
Sbjct: 741 KTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREAS 800
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
L +R+ ++ ++ AE+ V+ +HF+ A PS
Sbjct: 801 LCALRQ--EITGQKNGIGTAEL----TVSHKHFEEAFRKVKPS 837
Score = 404 (147.3 bits), Expect = 3.2e-95, Sum P(2) = 3.2e-95
Identities = 77/150 (51%), Positives = 100/150 (66%)
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+ + I E + + + F AL PSA RE V VPNV W D+G LE+++ EL
Sbjct: 536 DQDPISEEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMA 595
Query: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 556
+ PV +PE+F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+
Sbjct: 596 ILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 655
Query: 557 GESEANVREIFDKARQSAPCVLFFDELDSI 586
GESE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 656 GESERAVRQVFQRAKNSAPCVIFFDEVDAL 685
Score = 271 (100.5 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 49/118 (41%), Positives = 81/118 (68%)
Query: 469 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
+ T +++ +V +ED+GG + +E+ + + + + HPE ++ G+ P +GVL +GPPGCGK
Sbjct: 252 KSTELQISSVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 529 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
TLLA AIA E + V PE+++ GESE +R++FD+A +APC++F DE+D+I
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAI 368
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 572 (206.4 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 125/260 (48%), Positives = 175/260 (67%)
Query: 195 RREDENRLDE-----VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYG 249
RR+ EN +D V D+GG+ + Q+ +LV LP+ PQ++ + V+PP+G+LL+G
Sbjct: 147 RRKAENAVDRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHG 206
Query: 250 PPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDE 309
PPG GKT+IA A A E G F I+ P I+S ++GESE LR+ FEEA++ AP +IFIDE
Sbjct: 207 PPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDE 266
Query: 310 IDSIAPKREKTHGEVERRIVSQLLTLMDGL---KSRAH-VIVIGATNRPNSIDPALRRFG 365
ID+I PKRE + E+E+RIV+QLLT MD L K+ VIV+ ATNRP+S+D ALRR G
Sbjct: 267 IDAITPKRENSQREMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGG 326
Query: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
RFD+EI++ VP E R ++LR T+ M+L DD+D + +AK T G+VGADL L + A
Sbjct: 327 RFDKEINMTVPSEPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGST 386
Query: 426 CIREKMDVIDLED-ETIDAE 444
I+ +D++ E +D E
Sbjct: 387 AIKRYLDLLKSNSGEEMDIE 406
Score = 496 (179.7 bits), Expect = 3.4e-47, P = 3.4e-47
Identities = 102/263 (38%), Positives = 165/263 (62%)
Query: 195 RREDENRLDEVGYDDVG---GVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251
+RE + + + D+G G+R ++A +V+ P++HP+L+ S+G+ P G+LL+GPP
Sbjct: 456 KREGFATIPDTTWADIGALSGIRDELATA--IVD-PIKHPELYASVGITAPTGVLLWGPP 512
Query: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
G GKTL+A+AVANE+ A F + GPE+++K GESE +R+ F A + P +IF DE+D
Sbjct: 513 GCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELD 572
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGL-KSRAHVIVIGATNRPNSIDPALRRFGRFDRE 370
++ P+R+ T E R+V+ LLT +DGL SR + VI ATNRP+ IDPA+ R GR +
Sbjct: 573 ALVPRRDDTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETL 632
Query: 371 IDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ + +P + R+E+L+ + + + + DL R+A++ G+ GADL +L A I+ +
Sbjct: 633 LFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRR 692
Query: 431 MDVIDLEDETIDAEILNSMAVTD 453
D I +D + A+ +VTD
Sbjct: 693 -DTIKFDD-FVAAKSFIRPSVTD 713
Score = 391 (142.7 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 76/160 (47%), Positives = 104/160 (65%)
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 486
++E +I ET + V+++ F TAL PS+ RE +P+ W DIG L
Sbjct: 415 VKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGAL 474
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
++ EL + P++HPE + G++ GVL +GPPGCGKTLLAKA+ANE +ANFISV
Sbjct: 475 SGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISV 534
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
KGPELL + GESE VR++F +AR S PCV+FFDELD++
Sbjct: 535 KGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDAL 574
Score = 253 (94.1 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 46/110 (41%), Positives = 75/110 (68%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V+ D+GGL++V ++L + V P+ P+ + + P +GVL +GPPGCGKT++A A A
Sbjct: 161 HVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFA 220
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E FIS+ P +++ GESE +RE F++A++ APC++F DE+D+I
Sbjct: 221 AELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAI 270
Score = 37 (18.1 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 284 GESESNLRKAFEEA-EKNAPSIIFIDEIDSI 313
GES S+ R+ E A +++ P+ + + ++ +
Sbjct: 140 GESHSSKRRKAENAVDRSPPTHVSLADLGGL 170
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 571 (206.1 bits), Expect = 8.1e-95, Sum P(2) = 8.1e-95
Identities = 113/244 (46%), Positives = 167/244 (68%)
Query: 184 DTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
+ E + + R E ++ V ++DVGG + ++ +++ + +RHP++++ +GV PP+
Sbjct: 240 EIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPR 298
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
G+LL+GPPG GKTL+A A+A E + PEI+S ++GESE LR+ F++A NAP
Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPC 358
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPA 360
I+FIDEID+I PKRE ++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPA
Sbjct: 359 IVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRR GRFDRE+ +G+PDE R +L+ + ++L + + +A T G+VGADL ALC
Sbjct: 419 LRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCR 478
Query: 421 EAAL 424
EAA+
Sbjct: 479 EAAM 482
Score = 514 (186.0 bits), Expect = 1.2e-48, P = 1.2e-48
Identities = 115/303 (37%), Positives = 182/303 (60%)
Query: 179 CVVAPDTEI-FCEGEP-VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS 236
C+ D + E +P +RE + V + D+G + ++ + P+R+P F++
Sbjct: 549 CIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRT 608
Query: 237 IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEE 296
+G+ P GILL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 609 LGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQR 668
Query: 297 AEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
A+ +AP +IF DE+D++ P+R R+V+QLLT MDGL++R V ++ ATNRP+
Sbjct: 669 AKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDI 728
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN-MK--LSDDVDLERIAKDT--HGYV 411
IDPA+ R GR D+ + +G+P R+ +L+ TKN K L +DV+LE IA D + Y
Sbjct: 729 IDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYT 788
Query: 412 GADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS-ALRE 470
GADL AL EA+L +R++ I + + A + V+ +HF+ A PS ++++
Sbjct: 789 GADLTALVREASLCALRQE---ITAQKNGVGA---GELKVSHKHFEDAFKKVKPSISIKD 842
Query: 471 TVV 473
V+
Sbjct: 843 QVM 845
Score = 399 (145.5 bits), Expect = 8.1e-95, Sum P(2) = 8.1e-95
Identities = 75/150 (50%), Positives = 100/150 (66%)
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+ + + E + + + F AL PSA RE V VPNV W DIG LE+++ EL
Sbjct: 536 DQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMA 595
Query: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 556
+ PV +P++F G+ G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+
Sbjct: 596 ILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 655
Query: 557 GESEANVREIFDKARQSAPCVLFFDELDSI 586
GESE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 656 GESERAVRQVFQRAKNSAPCVIFFDEVDAL 685
Score = 282 (104.3 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 52/118 (44%), Positives = 81/118 (68%)
Query: 469 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
R T +++ NV +ED+GG + +E+ + + + + HPE ++ G+ P +GVL +GPPGCGK
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 529 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
TLLA AIA E + V PE+++ GESE +RE+FD+A +APC++F DE+D+I
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAI 368
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 565 (203.9 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 118/254 (46%), Positives = 172/254 (67%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+R+ + + +GGV Q+ E++ LP+ HP+++ S GV+PP+G+LLYGPPG G
Sbjct: 180 KRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCG 239
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KT IA A+A E F I+ P ++S ++GESE LR+ FEEA++ AP +IF+DEID+I
Sbjct: 240 KTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAIT 299
Query: 315 PKREK-THGEVERRIVSQLLTLMDGL---KSRAH-VIVIGATNRPNSIDPALRRFGRFDR 369
PKR+ E+E+RIV+QLLTLMD L K+ V+VIGATNRP+S+D ALRR GRFDR
Sbjct: 300 PKRDGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLS--DDVDLERIAKDTHGYVGADLAALCTEAALQCI 427
EI + VP+E R+ +L+ TKN+KL + + ++K T GYVGADL +L T A + I
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 428 REKMDVI-DLEDET 440
+ + + +L++E+
Sbjct: 420 KRIFETMSELQEES 433
Score = 509 (184.2 bits), Expect = 3.5e-48, P = 3.5e-48
Identities = 108/282 (38%), Positives = 172/282 (60%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + +V + +VG + K ++ + P++ P+L+ +G+ P G+L++GPPG G
Sbjct: 509 KREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCG 568
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+ A F I GPE+++K GESE +R+ F+ A + P IIF DE+D++
Sbjct: 569 KTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALV 628
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R+ + E R+V+ LLT +DGL R V VIGATNRP+ IDPA+ R GR D+ + I
Sbjct: 629 PRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIE 688
Query: 375 VPDEVGRLEVLR--IHTKNMKLSDDVDLERIAKDTH--GYVGADLAALCTEAALQCIR-- 428
+P RLE+L+ + T N L +VDL I++D+ + GADL++L EA + ++
Sbjct: 689 LPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKR 748
Query: 429 ----EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
+K+ +D D+ + +++T E F AL + PS
Sbjct: 749 FFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPS 790
Score = 400 (145.9 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 72/153 (47%), Positives = 107/153 (69%)
Query: 434 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 493
+++ + ++ E L +A+T + F AL + PSA RE +P+V W+++G L ++ EL
Sbjct: 475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534
Query: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 553
+ P++ PE + K G++ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ GESE VR++F +AR S PC++FFDELD++
Sbjct: 595 KYVGESEKAVRQVFQRARASTPCIIFFDELDAL 627
Score = 300 (110.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 52/118 (44%), Positives = 80/118 (67%)
Query: 469 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
R+ PN++ +GG+E+V +L E + P+ HPE + G+ P +GVL YGPPGCGK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 529 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
T +A A+A E + FI++ P +++ GESE +REIF++A+Q APC++F DE+D+I
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAI 298
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 565 (203.9 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 118/254 (46%), Positives = 172/254 (67%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+R+ + + +GGV Q+ E++ LP+ HP+++ S GV+PP+G+LLYGPPG G
Sbjct: 180 KRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCG 239
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KT IA A+A E F I+ P ++S ++GESE LR+ FEEA++ AP +IF+DEID+I
Sbjct: 240 KTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAIT 299
Query: 315 PKREK-THGEVERRIVSQLLTLMDGL---KSRAH-VIVIGATNRPNSIDPALRRFGRFDR 369
PKR+ E+E+RIV+QLLTLMD L K+ V+VIGATNRP+S+D ALRR GRFDR
Sbjct: 300 PKRDGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLS--DDVDLERIAKDTHGYVGADLAALCTEAALQCI 427
EI + VP+E R+ +L+ TKN+KL + + ++K T GYVGADL +L T A + I
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 428 REKMDVI-DLEDET 440
+ + + +L++E+
Sbjct: 420 KRIFETMSELQEES 433
Score = 509 (184.2 bits), Expect = 3.5e-48, P = 3.5e-48
Identities = 108/282 (38%), Positives = 172/282 (60%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + +V + +VG + K ++ + P++ P+L+ +G+ P G+L++GPPG G
Sbjct: 509 KREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCG 568
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+ A F I GPE+++K GESE +R+ F+ A + P IIF DE+D++
Sbjct: 569 KTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALV 628
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R+ + E R+V+ LLT +DGL R V VIGATNRP+ IDPA+ R GR D+ + I
Sbjct: 629 PRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIE 688
Query: 375 VPDEVGRLEVLR--IHTKNMKLSDDVDLERIAKDTH--GYVGADLAALCTEAALQCIR-- 428
+P RLE+L+ + T N L +VDL I++D+ + GADL++L EA + ++
Sbjct: 689 LPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKR 748
Query: 429 ----EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
+K+ +D D+ + +++T E F AL + PS
Sbjct: 749 FFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPS 790
Score = 400 (145.9 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 72/153 (47%), Positives = 107/153 (69%)
Query: 434 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 493
+++ + ++ E L +A+T + F AL + PSA RE +P+V W+++G L ++ EL
Sbjct: 475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534
Query: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 553
+ P++ PE + K G++ GVL +GPPGCGKTLLAKA+ANE +ANFIS+KGPELL
Sbjct: 535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ GESE VR++F +AR S PC++FFDELD++
Sbjct: 595 KYVGESEKAVRQVFQRARASTPCIIFFDELDAL 627
Score = 300 (110.7 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 52/118 (44%), Positives = 80/118 (67%)
Query: 469 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
R+ PN++ +GG+E+V +L E + P+ HPE + G+ P +GVL YGPPGCGK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 529 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
T +A A+A E + FI++ P +++ GESE +REIF++A+Q APC++F DE+D+I
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAI 298
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 497 (180.0 bits), Expect = 5.9e-49, Sum P(2) = 5.9e-49
Identities = 101/255 (39%), Positives = 155/255 (60%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V +DDVG + ++ + P+R+P+ +K++G+ P G+L+YGPPG G
Sbjct: 553 KREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCG 612
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+A+A+E A F + GPE+++K GESE +R+ F+ A ++P +IF DE D++A
Sbjct: 613 KTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALA 672
Query: 315 PKREKTHG---EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
PKR G + R+V+QLLT MDGL+ R+ V +I ATNRP+ ID A+ R GR D+ +
Sbjct: 673 PKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMV 732
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDT--HGYVGADLAALCTEAALQCIRE 429
+ +P R E+L+ T + + DVDL ++ D H + GADL+ L EAA I
Sbjct: 733 YVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISR 792
Query: 430 KMDVIDLEDETIDAE 444
D E +T+ E
Sbjct: 793 GFDNNSTEPDTVTME 807
Score = 428 (155.7 bits), Expect = 1.6e-94, Sum P(3) = 1.6e-94
Identities = 79/152 (51%), Positives = 106/152 (69%)
Query: 436 LEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQE 495
+ E ++ E LNS+ + FK AL P+A RE +PNV W+D+G L V+ EL
Sbjct: 521 ISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTN 580
Query: 496 TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 555
++ P+ +P+K++ G+ GVL YGPPGCGKTLLAKAIA+ECQANFISVKGPELL +
Sbjct: 581 SILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKY 640
Query: 556 FGESEANVREIFDKARQSAPCVLFFDELDSIA 587
GESE VR++F +A S+PCV+FFDE D++A
Sbjct: 641 VGESERAVRQVFQRAAASSPCVIFFDEFDALA 672
Score = 370 (135.3 bits), Expect = 1.6e-94, Sum P(3) = 1.6e-94
Identities = 74/151 (49%), Positives = 102/151 (67%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ + ++GGV + IRE +E P+ HP+++ +GV+PP+GILL+GP G GKTL+A+A+A
Sbjct: 213 INFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG 272
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E F I+ EI S ++GESE+ +R F A AP IIFIDEID+IAPKRE ++
Sbjct: 273 ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDM 332
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPN 355
ERRIVSQLLT MD L ++ +TN PN
Sbjct: 333 ERRIVSQLLTCMDSLN---YLSSNNSTNEPN 360
Score = 295 (108.9 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
+P +N+ ++GG+E+ R+++E ++YP+ HPE + G+ P +G+L +GP GCGKTLLAKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IA E + ++ E+ + GESEA VR +F A APC++F DE+D+IA
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIA 322
Score = 229 (85.7 bits), Expect = 1.6e-94, Sum P(3) = 1.6e-94
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 342 RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLE 401
+ HVIVIGATNRP S+D ALR GRFD+EI +G+PD+ R ++L++ T M+L ++ D E
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 402 RIAKDTHGYVGADLAALCTEAALQCI 427
IA T GYVGAD+ L EAA +
Sbjct: 460 EIATLTPGYVGADINLLVKEAATNSV 485
Score = 45 (20.9 bits), Expect = 5.9e-49, Sum P(2) = 5.9e-49
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRV 99
DT L G + +C+ + D T + ++ KV+ S +R+
Sbjct: 416 DTALRIGGRFDKEICLGIPDQTA---RCKILKVITSKMRL 452
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 559 (201.8 bits), Expect = 3.2e-94, Sum P(2) = 3.2e-94
Identities = 112/250 (44%), Positives = 166/250 (66%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +G PP+G+LL+GPPG GKTL+
Sbjct: 250 ELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + E++S ++GESE LR+ FE+A NAP ++FIDEID+I PKRE
Sbjct: 309 AHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE 368
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 369 VASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 428
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
PDE R +L+ + ++L + +A T G+VGADL ALC EAA+ + + +
Sbjct: 429 PDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQ 488
Query: 436 LEDETIDAEI 445
E + D E+
Sbjct: 489 -EQQPTDPEM 497
Score = 495 (179.3 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 100/242 (41%), Positives = 153/242 (63%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + P+R P+ F+++G+ P G+LL GPPG G
Sbjct: 567 KREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCG 626
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A +AP +IF DE+D++
Sbjct: 627 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALC 686
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 687 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 746
Query: 375 VPDEVGRLEVLRIHTKN---MKLSDDVDLERIAKDTHG--YVGADLAALCTEAALQCIRE 429
+P RL +L+ TKN L DV+LE +A D Y GADL+AL EA++ +R+
Sbjct: 747 LPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 806
Query: 430 KM 431
+M
Sbjct: 807 EM 808
Score = 407 (148.3 bits), Expect = 3.2e-94, Sum P(2) = 3.2e-94
Identities = 80/170 (47%), Positives = 111/170 (65%)
Query: 420 TEAALQCIREKMD-VIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP 476
+E + +++++ +++L + + E L + + F AL + PSA RE V VP
Sbjct: 516 SETPVLSVQDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVP 575
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V W DIG LE+++ EL + PV PE+F G+ GVL GPPGCGKTLLAKA+A
Sbjct: 576 SVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVA 635
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
NE NFISVKGPELL M+ GESE VR++F +AR SAPCV+FFDE+D++
Sbjct: 636 NESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDAL 685
Score = 256 (95.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 473 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
++V V +ED+GG + +E+ + + + + HPE + G P +GVL +GPPGCGKTLLA
Sbjct: 251 LQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLA 309
Query: 533 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V E+++ GESE +RE+F++A +APCVLF DE+D+I
Sbjct: 310 HAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAI 363
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 555 (200.4 bits), Expect = 9.8e-94, Sum P(2) = 9.8e-94
Identities = 127/302 (42%), Positives = 190/302 (62%)
Query: 153 KGDLFLVRGGMRSVEFKVIETDPP-----------EYCVVAPDTE-IFCEGEPVRREDEN 200
+GD + +S EF V+E++ E+ V + E I +G+ + E
Sbjct: 193 EGDEKKLISEQKSTEFSVLESEKKKTKGKRAKRKKEFPDVDEEIESILLKGKVKSKGPEL 252
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
V ++DVGG + + +I +++ + +RHP+++ +GV PP+G LL+GPPG GKTL+A+
Sbjct: 253 YHPSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQ 311
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
A+A E + E++S ++GESE LR+ F++A NAP ++FIDEID+I PKRE
Sbjct: 312 AIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVA 371
Query: 321 HGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
++ERRIV+QLLT +D L + A V+VIGATNRP+S+DPALRR GRFDREI +G+PD
Sbjct: 372 SKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 431
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
E R ++L+ + +KL D +A T GYVGADL ALC EAA+ C ++ +I E
Sbjct: 432 EAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAM-CTVNRV-LIKSE 489
Query: 438 DE 439
++
Sbjct: 490 EQ 491
Score = 505 (182.8 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 105/268 (39%), Positives = 165/268 (61%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + +V + D+G + ++ + P+R+P+ FK++G+ P G+LL GPPG G
Sbjct: 568 KREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCG 627
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A +AP +IF DE+D++
Sbjct: 628 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALC 687
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 688 PRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVG 747
Query: 375 VPDEVGRLEVLRIHTKN---MKLSDDVDLERIA--KDTHGYVGADLAALCTEAALQCIRE 429
+P RL +L+ TK+ L DV+LE IA + Y GADL+AL EA++ +R+
Sbjct: 748 LPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQ 807
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFK 457
+M + + + EI S +E F+
Sbjct: 808 EMALPTTKSKKEKGEIKISRKHFEEAFR 835
Score = 407 (148.3 bits), Expect = 9.8e-94, Sum P(2) = 9.8e-94
Identities = 77/150 (51%), Positives = 103/150 (68%)
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+ + + + L + + F AL + PSA RE V +P+V W DIG LE+V+ EL
Sbjct: 537 KQDPLPEDQLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMA 596
Query: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 556
+ PV +PE+F+ G++ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+
Sbjct: 597 ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 656
Query: 557 GESEANVREIFDKARQSAPCVLFFDELDSI 586
GESE VR++F +AR SAPCV+FFDE+D++
Sbjct: 657 GESERAVRQVFQRARNSAPCVIFFDEVDAL 686
Score = 265 (98.3 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 51/111 (45%), Positives = 76/111 (68%)
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P+V +ED+GG + +E+ + + + V HPE + G+ P +G L +GPPGCGKTLLA+AI
Sbjct: 255 PSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A E + + V E+++ GESE +RE+FD+A +APCVLF DE+D+I
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAI 364
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 556 (200.8 bits), Expect = 7.2e-53, P = 7.2e-53
Identities = 115/252 (45%), Positives = 158/252 (62%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++DVGG + Q+ E VE P +H FK IG +PP GIL++GPPG K
Sbjct: 712 REVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSK 771
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+ARAVA+E F + GPE+ SK GESE +R F +A NAPSIIF DEIDS+A
Sbjct: 772 TLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLAS 831
Query: 316 KREKTHG--EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
R K + V R++SQLL +DGL R V VI ATNRP+ ID AL R GRFDR + +
Sbjct: 832 IRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYV 891
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV 433
G P+E R +L+IH + + S D+ L+ +A T GY GAD++ +C EAA+ + E +++
Sbjct: 892 GPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEM 951
Query: 434 IDLEDETIDAEI 445
++ + A I
Sbjct: 952 EEISMRHLKAAI 963
Score = 546 (197.3 bits), Expect = 1.1e-92, Sum P(2) = 1.1e-92
Identities = 109/237 (45%), Positives = 161/237 (67%)
Query: 197 EDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
E EN E+ +GG+ K+ A +R++++ L S+G++P KG+L++GPPG+GKT
Sbjct: 376 EGENVGCEIS--KLGGLSKEYAILRDIIDSSSIKNSL-SSLGLRPTKGVLIHGPPGTGKT 432
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
+AR A +G FF +NGPEI+S+ GESE L + F A P+++FID++D+IAP
Sbjct: 433 SLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPA 492
Query: 317 REKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
R++ E+ +R+V+ LL LMDG+ V+VI ATNRP+SI+PALRR GR DREI+IGVP
Sbjct: 493 RKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVP 552
Query: 377 DEVGRLEVLRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
R ++L I + M+ S ++ +E++A THG+VGADL+ALC EAA C+R +D
Sbjct: 553 SSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLD 609
Score = 414 (150.8 bits), Expect = 1.1e-92, Sum P(2) = 1.1e-92
Identities = 71/142 (50%), Positives = 104/142 (73%)
Query: 447 NSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 506
++++V E F+ A PSA+RE ++EVP VNWED+GG VK +L E V++P +H +
Sbjct: 690 HTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDA 749
Query: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
F++ G P G+L +GPPGC KTL+A+A+A+E + NF++VKGPEL + W GESE VR +
Sbjct: 750 FKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSL 809
Query: 567 FDKARQSAPCVLFFDELDSIAT 588
F KAR +AP ++FFDE+DS+A+
Sbjct: 810 FAKARANAPSIIFFDEIDSLAS 831
Score = 213 (80.0 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 46/116 (39%), Positives = 64/116 (55%)
Query: 474 EVPNVNWE--DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
E NV E +GGL L++ + G+ P+KGVL +GPPG GKT L
Sbjct: 376 EGENVGCEISKLGGLSKEYAILRDIIDSS-SIKNSLSSLGLRPTKGVLIHGPPGTGKTSL 434
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
A+ A NF SV GPE+++ + GESE + E+F A + P V+F D+LD+IA
Sbjct: 435 ARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIA 490
Score = 37 (18.1 bits), Expect = 8.8e-36, Sum P(2) = 8.8e-36
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 286 SESNLRKAFEEAEKNAPSII 305
+E LR++ EEA P ++
Sbjct: 39 NEEELRRSIEEASAAFPCLL 58
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 556 (200.8 bits), Expect = 9.1e-92, Sum P(2) = 9.1e-92
Identities = 118/264 (44%), Positives = 177/264 (67%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +GV PP+G+LL+GPPG GKTL+
Sbjct: 255 ELQISSVKFEDVGGNDTTLKEVCKML-VHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLL 313
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + EI+S ++GESE LR+ FE+A +AP I+FIDEID+I PKRE
Sbjct: 314 AHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKRE 373
Query: 319 KTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 374 IASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 433
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
PDE R +L+ + ++L + +A T G+VGADL ALC EAA+ C ++ +++
Sbjct: 434 PDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAM-CAVNRV-LME 491
Query: 436 LEDE-TIDAEILNSMAVTDEHFKT 458
L+ + + EI S + D+ +T
Sbjct: 492 LQGQHKKNPEIEASPSEGDQEERT 515
Score = 480 (174.0 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 107/291 (36%), Positives = 168/291 (57%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + L +P F+ +G+ P G+LL GPPG G
Sbjct: 567 KREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCG 626
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 627 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 686
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 687 PRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 746
Query: 375 VPDEVGRLEVLRIHTKN-MK--LSDDVDLERIAKDTHG--YVGADLAALCTEAALQCIRE 429
+P RL +L+ TKN K L DV+LE IA D Y GADL+AL EA++ +++
Sbjct: 747 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQ 806
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
+M + +E + ++ +HF+ A S +E + W
Sbjct: 807 EM-----ARQKSGSE-KGELKISQKHFEEAFKKVKSSISKEDRAMYEALQW 851
Score = 387 (141.3 bits), Expect = 9.1e-92, Sum P(2) = 9.1e-92
Identities = 74/148 (50%), Positives = 99/148 (66%)
Query: 439 ETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQ 498
+ + E L + + F AL + PSA RE VPNV W DIG LE+++ EL +
Sbjct: 538 DPLSEEQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAIL 597
Query: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGE 558
+ + +P++F G+ GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GE
Sbjct: 598 FLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE 657
Query: 559 SEANVREIFDKARQSAPCVLFFDELDSI 586
SE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 658 SERAVRQVFQRAKNSAPCVIFFDEVDAL 685
Score = 264 (98.0 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 49/114 (42%), Positives = 77/114 (67%)
Query: 473 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
+++ +V +ED+GG + +E+ + + + + HPE + G+ P +GVL +GPPGCGKTLLA
Sbjct: 256 LQISSVKFEDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLA 314
Query: 533 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V E+++ GESE +RE+F++A SAPC+LF DE+D+I
Sbjct: 315 HAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAI 368
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 190/467 (40%), Positives = 282/467 (60%)
Query: 129 EGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIF 188
E V L + Y+ P++ P VR + VE ++ E ++ P T +
Sbjct: 125 EAVRDLLTNVYVSPHYVVTVGPN-------VRAPVLHVEILSVDPVTEEAGLITPQTSVT 177
Query: 189 CEG----EPVR--REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 242
+ E R ED ++ G DDVG ++E+V+LP R P+ FK +G+ P
Sbjct: 178 IKEVITLERYRLLTEDTAKIPVAGLDDVG------ESLKEMVDLPFRFPRTFKKLGLSVP 231
Query: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK--- 299
G+LL GPPG GKTL+ +AVA E GA+ CI+GP + GESE NLR FE+ +
Sbjct: 232 NGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSC 291
Query: 300 NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDP 359
P+++FIDEID++ PKR ++ E R+V+QLLTL+DG+ + ++V+ ATNRP+++DP
Sbjct: 292 EGPTVLFIDEIDALCPKRGSSNSAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDP 351
Query: 360 ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALC 419
ALRR GRFDRE+ IG P R +L++ T +M +S D+DL ++A+ T GYVGADL ALC
Sbjct: 352 ALRRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTDIDLVKLAEMTTGYVGADLTALC 411
Query: 420 TEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVN 479
EAA+Q + +D AE+L +MA E FK +S SA+ + E +
Sbjct: 412 REAAMQAVFHSS--LD------SAEVLINMADFQEAFKKIQPSSFRSAIG--LKECKPIT 461
Query: 480 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 539
WE IGGLE+VK +L+++V++P++ P+ F + G++ KGVL YGP GC KT L KA+A C
Sbjct: 462 WEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSC 521
Query: 540 QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+F+SV G EL + + G+SE + ++F +AR + P ++F DE+DSI
Sbjct: 522 HCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSI 568
Score = 270 (100.1 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 87/283 (30%), Positives = 142/283 (50%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ ++ +GG+ ++++ VE P++ PQ F +G+ PKG+LLYGP G KT + +AVA
Sbjct: 460 ITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVAT 519
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---H 321
F ++G E+ S G+SE L + F +A N P+IIF+DEIDSI R + H
Sbjct: 520 SCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGH 579
Query: 322 GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV----PD 377
G V R++S LL +DG+ + R N + L R+ + PD
Sbjct: 580 G-VSERVLSVLLNELDGVGLKV------TERRGNKLQLELEFQETLSRDFMVVAATNRPD 632
Query: 378 EV-------GRLE-VLRIHTKNMK--LSD-DVDLERIAKDTHGYVGADLAA---LCTEAA 423
+ GRL+ V+ I ++K LS + E+I DT + D+AA L + A
Sbjct: 633 MLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSL-QDIAARTDLFSGAD 691
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
++ + ++ ++ L++ ++A AV HF +L T PS
Sbjct: 692 IENLCKEAALLALQENGLEAT-----AVKHGHFVKSLQTVKPS 729
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 546 (197.3 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 112/261 (42%), Positives = 168/261 (64%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V + D+GG +++E +E PL++PQ F +G+KPPKGILLYGPPG K
Sbjct: 610 REVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSK 669
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+A E+G F + GPE++SK GESE +R F++A +N+PSI+F DEID +A
Sbjct: 670 TLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAI 729
Query: 316 KRE-KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
R + G VER +VSQLLT MDG++ +V +IGATNRP+ ID A+ R GR DR + I
Sbjct: 730 SRSGEGSGAVER-VVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYIS 788
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
PD R E+ IH K + S D+D+ +++ T GY GA++ ++C EA++ ++E ++
Sbjct: 789 PPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDINAK 848
Query: 435 DLEDETIDAEILN-SMAVTDE 454
++ + I N +T E
Sbjct: 849 EINMSHFISAIGNVKKGITQE 869
Score = 479 (173.7 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 95/205 (46%), Positives = 138/205 (67%)
Query: 399 DLERIAKDTHGYVGADLAALCTEAALQCIR------EKM-DVIDLEDETIDAE------- 444
++ IA THG+VGAD+ +LC EA+L+C +K+ I++E E E
Sbjct: 524 EIAMIASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENL 583
Query: 445 --ILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVE 502
+L+ + ++ AL PS++RE VVE+P V W DIGG E++K++L+E +++P++
Sbjct: 584 QNLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLK 643
Query: 503 HPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEAN 562
+P+ F + G+ P KG+L YGPPGC KTLLAKA+A E NFI+VKGPELL+ W GESE
Sbjct: 644 YPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERA 703
Query: 563 VREIFDKARQSAPCVLFFDELDSIA 587
VR+IF KARQ++P +LFFDE+D +A
Sbjct: 704 VRDIFKKARQNSPSILFFDEIDGLA 728
Score = 401 (146.2 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 78/144 (54%), Positives = 102/144 (70%)
Query: 198 DENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
D N+ + + +GG+ Q+ QIREL++L L KS GVKPPKGILLYGPPG+GKTL
Sbjct: 302 DNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTL 361
Query: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
+AR VA +T A F ING +I+ K G +E L+K F++A + +PSIIFIDE+D++ PKR
Sbjct: 362 LARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR 421
Query: 318 EKTHGEVERRIVSQLLTLMDGLKS 341
E EVE+RIV LLTLMDG+ S
Sbjct: 422 EDNSSEVEKRIVGSLLTLMDGVVS 445
Score = 236 (88.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 40/110 (36%), Positives = 71/110 (64%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+N++ IGGL+ ++++E + + + FG+ P KG+L YGPPG GKTLLA+ +A
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ A ++ G ++L ++G +E +++IF A Q +P ++F DELD++
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDAL 417
Score = 217 (81.4 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 44/84 (52%), Positives = 61/84 (72%)
Query: 345 VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNM--KLSDDVDLER 402
VIVIG TNRP+SID ALRR GRFD EI+I +P++ GR ++L I + +L+ ++
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQ-EIAM 527
Query: 403 IAKDTHGYVGADLAALCTEAALQC 426
IA THG+VGAD+ +LC EA+L+C
Sbjct: 528 IASKTHGFVGADIESLCKEASLKC 551
Score = 42 (19.8 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 87 IRMNKVVRSNLRVRLGDVV 105
I+++ + R N V++GD V
Sbjct: 108 IQLDSIQRENCNVKIGDYV 126
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 831 (297.6 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 171/412 (41%), Positives = 259/412 (62%)
Query: 180 VVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV 239
+V P T I P E+ EV +GG+ + +REL+ LPLR+P+ S+G+
Sbjct: 177 LVTPRTHISLSEVPPSEEEPQ--PEV---PLGGLSEAADSLRELLRLPLRYPRALASLGL 231
Query: 240 KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK 299
+ P+G+LL GPPG GKT + RAVA ETGA ++ P + GE+E N+R+ F+ A +
Sbjct: 232 EVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARE 291
Query: 300 NA---PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
A P+++F+DE+D++ P+R H E R+V+Q+LTL+DG+ V+V+G+TNRP++
Sbjct: 292 LASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDA 351
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLA 416
+DPALRR GRFDRE+ IG P R +L++ T M +S VDL +A+ T GYVGADL
Sbjct: 352 LDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLT 411
Query: 417 ALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRET--VVE 474
ALC EAA+Q + + ++ TID TD F A PS+ R V +
Sbjct: 412 ALCREAAMQALLHSEK--NQDNPTIDE--------TD--FLEAFKKIQPSSFRSVIGVTD 459
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
+ V WE IGGLE+VK +L++++++P++ P +F + G++ KGVL YGPPGC KT L +A
Sbjct: 460 IKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRA 519
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+A C+ +F+SV G +L + + G+SE + ++F +AR + P ++F DE+DSI
Sbjct: 520 LATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSI 571
Score = 280 (103.6 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
VG++ +GG+ ++++ +E PL+ P+ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 463 VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTHG 322
F ++G ++ S G+SE L + F +A N P+I+F+DEIDSI R +T
Sbjct: 523 SCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTEC 582
Query: 323 EVERRIVSQLLTLMDGL 339
V+ R++S LL +DG+
Sbjct: 583 NVQDRVLSVLLNELDGV 599
Score = 222 (83.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 63/182 (34%), Positives = 99/182 (54%)
Query: 260 RAVANETGAFFFCINGPEIM-SKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
+A AN T A F I+ S+ +E N++ N + + I+ K +
Sbjct: 554 QARAN-TPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSD 612
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
+ HG+ ++ ++ L + S +VIV+ ATNRP+ +D AL R GR D+ I I PDE
Sbjct: 613 Q-HGKCKQLEKNEELEFQEIFNS--NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDE 669
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK-MDVIDLE 437
GRL +L++ TKN + DV LE++A +T + GADL LC EAAL ++E ++V ++
Sbjct: 670 KGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVK 729
Query: 438 DE 439
E
Sbjct: 730 QE 731
Score = 219 (82.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 62/169 (36%), Positives = 90/169 (53%)
Query: 305 IFIDEIDSIAPK-------REKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSI 357
+ ++E+D + K + HG+ ++ ++ L + S +VIV+ ATNRP+ +
Sbjct: 591 VLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNS--NVIVVAATNRPDVL 648
Query: 358 DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAA 417
D AL R GR D+ I I PDE GRL +L++ TKN + DV LE++A +T + GADL
Sbjct: 649 DDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGN 708
Query: 418 LCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
LC EAAL ++E LE T V EHF +L T PS
Sbjct: 709 LCKEAALLALQEN----GLEVTT----------VKQEHFLESLKTVKPS 743
Score = 38 (18.4 bits), Expect = 6.4e-85, Sum P(2) = 6.4e-85
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 181 VAPDTEIFCEGEPVR 195
+APD+ F EG P++
Sbjct: 1 MAPDSGSFPEGPPLK 15
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 172/400 (43%), Positives = 251/400 (62%)
Query: 192 EPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251
+ V+ D + +V +GG+ A ++E++ PLR+P + +G+ P+G+LL GPP
Sbjct: 172 QTVKHLDRQQ-QQVSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPP 230
Query: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA---PSIIFID 308
G GKTL+ R VA + GA +NGPE+ GESE NLR+ FE+A A P ++ ID
Sbjct: 231 GVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLID 290
Query: 309 EIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFD 368
EIDS+ P+R + E R+V+QLLTLMD + S ++IGATN+P+S+DPALRR GRFD
Sbjct: 291 EIDSLCPRRTGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFD 350
Query: 369 REIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428
RE+ IGVP + R +L+ + M LS DVDL +A+ T GYVGADL+AL EAALQ +R
Sbjct: 351 REVIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMR 410
Query: 429 EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV--VEVPNVNWEDIGGL 486
+++ S V+ +HF AL PS LR ++ + + WE IGGL
Sbjct: 411 H-------------SQMGASEPVSMQHFMQALRHVQPSCLRSSIGATDFKPIGWEQIGGL 457
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
E+VK +L++++++P+ PE F + G+S +GVL YGPPGC KT L KA A+ +F S+
Sbjct: 458 EDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSL 517
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL + + G+SE + ++F +AR AP ++F DE+DS+
Sbjct: 518 SGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSM 557
Score = 287 (106.1 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 53/141 (37%), Positives = 89/141 (63%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+G++ +GG+ ++++ +E P+R P+ F +GV P+G+LLYGPPG KT + +A A+
Sbjct: 449 IGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAAS 508
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE---KTH 321
+ FF ++G E+ S G+SE L + F +A APSI+F+DE+DS+ RE +
Sbjct: 509 SSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSS 568
Query: 322 GEVERRIVSQLLTLMDGLKSR 342
V+ +++S LLT +DG+ R
Sbjct: 569 HSVQSQVLSVLLTELDGVGVR 589
Score = 244 (91.0 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 48/133 (36%), Positives = 79/133 (59%)
Query: 457 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
+T + S ++ + V+ +GG+E+V L+E + +P+ +P + G+S +
Sbjct: 163 RTCVDISTIQTVKHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPR 222
Query: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA-- 574
G+L GPPG GKTLL + +A + A ++V GPE+ GESE N+R +F++AR +A
Sbjct: 223 GLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADD 282
Query: 575 -PCVLFFDELDSI 586
PCVL DE+DS+
Sbjct: 283 GPCVLLIDEIDSL 295
Score = 190 (71.9 bits), Expect = 4.9e-37, Sum P(2) = 4.9e-37
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 345 VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIA 404
V+++ ATNRP ++D AL R GR D+ I + PD RL VLRI TK++ L DV LE +A
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLA 685
Query: 405 KDTHGYVGADLAALCTEAALQCIRE 429
T + GADL LC EAAL +RE
Sbjct: 686 AQTELFSGADLENLCKEAALLALRE 710
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 169/386 (43%), Positives = 244/386 (63%)
Query: 209 DVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268
++GG + + +REL+ P R+P +++G+K P+G+LLYGPPG+GKT + RAV E A
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 269 FFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGEV 324
++ + AGESE LR+AF EA +A PS+IFIDEID + P+R+ E
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARR-EQ 141
Query: 325 ERRIVSQLLTLMDGLK---SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ RI SQL TLMD K S V+V+ +TNR ++IDPALRR GRFD +++ P+E R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
L++L+++TK + L VDL+ IA +GYVGADL ALC EA + + D
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSD--------- 252
Query: 442 DAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPV 501
S+ +T + FK A PS R VE+P V W+D+GGL+++K++LQ+ V++P+
Sbjct: 253 ------SLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPI 306
Query: 502 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 561
+H F K G+SP +G+L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE EA
Sbjct: 307 KHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEA 366
Query: 562 NVREIFDKARQSAPCVLFFDELDSIA 587
+R F +AR ++P ++FFDE D +A
Sbjct: 367 LLRNTFQRARLASPSIIFFDEADVVA 392
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 113/286 (39%), Positives = 165/286 (57%)
Query: 191 GEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
G + R + +V +DDVGG++ ++++ VE P++H F +G+ P +GILL+GP
Sbjct: 269 GPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGP 328
Query: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
PG KT +A+A AN A FF ++ E+ S GE E+ LR F+ A +PSIIF DE
Sbjct: 329 PGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEA 388
Query: 311 DSIAPKR--EKTHGE--VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGR 366
D +A KR E + V R++S LLT MDGL+ ++V+ ATNRP +ID AL R GR
Sbjct: 389 DVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGR 448
Query: 367 FDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQC 426
FD + + PD R E+L++HT+NM L DDVDL +IA++T + GA+L LC E+
Sbjct: 449 FDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVS 508
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV 472
+RE + + AV + HF+TA + P+ E V
Sbjct: 509 LREN---------------IAATAVFNRHFQTAKSSLKPALTIEEV 539
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 809 (289.8 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 162/392 (41%), Positives = 258/392 (65%)
Query: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
+GG+ +Q+ + E++ P+ PQ+FK++ + PPKGILL GPPG+GKT + R V +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 270 FFCINGPEIMSKLAGESESNLRKAFEEA------EKNAPSIIFIDEIDSIAPKREKTHGE 323
I+ +I GE+E NLR F+EA + N+P ++FIDEID+I P R K+ +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKST-Q 407
Query: 324 VERRIVSQLLTLMDGLKSR-AHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E R+V Q LTL+DG+ +R ++I+I ATNRPN ID ALRR GR DREI+I VP++ RL
Sbjct: 408 NESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRL 467
Query: 383 EVLRIHTKNMKLSDDVD--LERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-E 439
++L+++ + +S L++IA +T GYVGA++ LC ++A K +++ ++ E
Sbjct: 468 DILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAF-SKYNLLKYQNNE 526
Query: 440 TIDAEILNSMAVTDEHFKTALGTSNPSALR-ETVVE-VPNVNWEDIGGLENVKRELQETV 497
+ E + E F+ ++ + S L+ E +VE + NV+W+DIGGL+++K EL++ +
Sbjct: 527 QNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIGGLDDIKEELRQAI 586
Query: 498 QYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFG 557
++P + E FEKFG+SP KG++ YGPPGC KT L KA+A+ + +F+S+ G + + + G
Sbjct: 587 EWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLG 646
Query: 558 ESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+SE +R+IF KARQ+ P +LFFDE+D+I ++
Sbjct: 647 DSEQTIRDIFKKARQTTPSILFFDEIDAIVSK 678
Score = 495 (179.3 bits), Expect = 7.0e-51, Sum P(3) = 7.0e-51
Identities = 101/237 (42%), Positives = 155/237 (65%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
EN + V +DD+GG+ ++R+ +E P + + F+ G+ PPKGI+LYGPPG KT +
Sbjct: 562 EN-ISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTL 620
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR- 317
+AVA+ + F ++G I S G+SE +R F++A + PSI+F DEID+I KR
Sbjct: 621 VKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRN 680
Query: 318 --EKTHGE-VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
+ + G+ + R++S L MDG++ VIVIGATNR + ID AL R GRFD+ ++I
Sbjct: 681 LSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIK 740
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
+PD++ RL++L+I TK++ LSD+V+L I+ T+G+ GADL LC EA+ Q +R +
Sbjct: 741 LPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDL 797
Score = 195 (73.7 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 43/116 (37%), Positives = 68/116 (58%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N N++ IGGL + L+E + YP+ P+ F+ + P KG+L GPPG GKT L + +
Sbjct: 284 NNNFK-IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVC 342
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIF----DK--ARQSAPCVLFFDELDSI 586
+ IS+ ++ + GE+E N+R IF DK A+ ++P V+F DE+D+I
Sbjct: 343 DAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTI 398
Score = 43 (20.2 bits), Expect = 7.0e-51, Sum P(3) = 7.0e-51
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 186 EIFCEGEPVRREDENRLDEVGYDDVGGV 213
+++C P+ N LD++ + VG V
Sbjct: 471 KLYCSKLPISPTPSNLLDQIADETVGYV 498
Score = 38 (18.4 bits), Expect = 1.3e-82, Sum P(2) = 1.3e-82
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 41 NSVVVLHPDTMEKLQFFRGDTILIKGKKRK 70
N + + MEKL GD I I +K++
Sbjct: 48 NELCYMSIQLMEKLSLKLGDWIFIDVQKQQ 77
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 169/412 (41%), Positives = 257/412 (62%)
Query: 180 VVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV 239
+V P T I G P + EV +GG+ + +REL+ LPL +P+ F S+G+
Sbjct: 177 LVTPRTHIGLSGVPPSESEPP--PEV---PLGGLAEAADSLRELLRLPLLYPRSFASLGL 231
Query: 240 KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK 299
P+G+LL GPPG GKT + RAVA E GA ++ P + GE+E N+R+ F+ A++
Sbjct: 232 AVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQE 291
Query: 300 NA---PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
A P+++F+DE+D++ P+R H E R+V+Q+LTL+DG+ V+V+G+TNRP++
Sbjct: 292 LAGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDA 351
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLA 416
+DPALRR GRFDRE+ IG P R +L++ T M +S VDL +A+ T GYVGADL
Sbjct: 352 LDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLT 411
Query: 417 ALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV--VE 474
ALC EAA+ + + ++ ID EI D F A PS+ R + ++
Sbjct: 412 ALCREAAMHALLHSGK--NQDNPLID-EI-------D--FLEAFKKIQPSSFRSVIGLMD 459
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
V + WE IGGLE+ KR+L++++++P++ P +F + G++ KGVL YGPPGC KT L +A
Sbjct: 460 VKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRA 519
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+A C +F+SV G +L + + G+SE + ++F +AR + P V+F DE+DSI
Sbjct: 520 LATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSI 571
Score = 276 (102.2 bits), Expect = 9.2e-38, Sum P(2) = 9.2e-38
Identities = 51/137 (37%), Positives = 85/137 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ ++ +GG+ ++++ +E PL+ P+ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 463 ITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTHG 322
F ++G ++ S G+SE L + F++A N P+++F+DEIDSI R KT
Sbjct: 523 SCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGC 582
Query: 323 EVERRIVSQLLTLMDGL 339
V+ R++S LL +DG+
Sbjct: 583 NVQERVLSVLLNELDGV 599
Score = 209 (78.6 bits), Expect = 9.2e-38, Sum P(2) = 9.2e-38
Identities = 54/124 (43%), Positives = 71/124 (57%)
Query: 343 AHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER 402
++V+++ ATNRP+ +D AL R GR D+ I I PDE RL +LR+ TKNM + DV LE
Sbjct: 622 SNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLEN 681
Query: 403 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGT 462
+A +T + GADL LC EAAL ++E LE T V EHF +L T
Sbjct: 682 LAAETCLFSGADLGNLCKEAALLALQEN----GLEATT----------VKQEHFLKSLKT 727
Query: 463 SNPS 466
PS
Sbjct: 728 VKPS 731
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 193/519 (37%), Positives = 293/519 (56%)
Query: 79 DDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDA 138
D C P + RS + L ++ V C ++ RV + PV G G A
Sbjct: 75 DPLCASPGAAVG-ASRSRRSLSLNRLLLV-PCPPLR---RVAVWPVLRERAGAPGARNTA 129
Query: 139 YLKPYFTEAYR--PVRKGDLFLVRGGMRSV--EFKVIETDP-PEYC-VVAPDTEIFCEGE 192
+ E R P+ G + + G + ++ P P+ +V P T + GE
Sbjct: 130 AVLEAAQELLRNRPISLGHVVVAPPGAPGLVAALHIVGGTPSPDPAGLVTPRTRVSLGGE 189
Query: 193 PVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPG 252
P EV +GG+ + +REL+ LPLR+P+ ++G+ P+G+LL GPPG
Sbjct: 190 PPSEAQPQ--PEV---PLGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPG 244
Query: 253 SGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA---PSIIFIDE 309
GKT + RAVA E GA ++ P + GE+E N+R+ F+ A + A PS++F+DE
Sbjct: 245 VGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDE 304
Query: 310 IDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDR 369
+D++ P+R E R+V+Q+LTL+DG V+V+GATNRP+++DPALRR GRFDR
Sbjct: 305 MDALCPQRGSR--APESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDR 362
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
E+ IG P R E+L++ T M +S VDL +A+ T GYVGADL ALC EAA+ +
Sbjct: 363 EVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLH 422
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV--VEVPNVNWEDIGGLE 487
+ ++ ID EI F A PS+ R + +++ V+WE+IGGLE
Sbjct: 423 SEK--NQDNPVID-EI---------DFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLE 470
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+VK +L++++++P++ P +F + G++ KGVL YGPPGC KT L +A+A C +F+SV
Sbjct: 471 DVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVS 530
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G +L + + G+SE + +IF +AR S P +LF DE+DSI
Sbjct: 531 GADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSI 569
Score = 269 (99.8 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 52/137 (37%), Positives = 85/137 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++++GG+ ++++ +E PL+ P F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 461 VDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 520
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTHG 322
F ++G ++ S G+SE L + F +A + P+I+F+DEIDSI R KT
Sbjct: 521 SCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGC 580
Query: 323 EVERRIVSQLLTLMDGL 339
+V+ R++S LL +DG+
Sbjct: 581 DVQERVLSVLLNELDGV 597
Score = 215 (80.7 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 50/136 (36%), Positives = 74/136 (54%)
Query: 457 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
+ +LG PS + EVP +GGL L+E ++ P+ +P G++ +
Sbjct: 183 RVSLGGEPPSEAQPQP-EVP------LGGLSEAADSLRELLRLPLRYPRALTALGLAVPR 235
Query: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA-- 574
GVL GPPG GKT L +A+A E A ++V P L GE+E NVR +F +AR+ A
Sbjct: 236 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASR 295
Query: 575 -PCVLFFDELDSIATQ 589
P +LF DE+D++ Q
Sbjct: 296 GPSLLFLDEMDALCPQ 311
Score = 214 (80.4 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 80/227 (35%), Positives = 111/227 (48%)
Query: 244 GILLYGP-PG-SGKTL--IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK 299
G L+ P G S K L I R T A F EI S L S S K + ++
Sbjct: 531 GADLFSPFVGDSEKVLSQIFRQARASTPAILFL---DEIDSILGARSAS---KTGCDVQE 584
Query: 300 NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDP 359
S++ ++E+D + K +ERR + +R+ V++I ATNRP+ +D
Sbjct: 585 RVLSVL-LNELDGVGLKT------IERRGSKSSQQEFQEVFNRS-VMIIAATNRPDVLDT 636
Query: 360 ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALC 419
AL R GR D+ I I PD GRL +L++ TK M + DV LE +A +T + GADL LC
Sbjct: 637 ALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLC 696
Query: 420 TEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
TEAAL + L++ +DA V EHF +L T PS
Sbjct: 697 TEAAL---------LALQENGLDAT-----TVKQEHFLKSLKTVKPS 729
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 157/382 (41%), Positives = 245/382 (64%)
Query: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
+GG+ + +REL+ LPLR+P+ ++G+ P+G+LL GPPG GKT + RAVA E GA
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA---PSIIFIDEIDSIAPKREKTHGEVER 326
++ P + GE+E N+R+ F A + A P+++F+DE+D++ P+R H E
Sbjct: 296 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 355
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R V+Q+LTL+DG++ V+V+ +TNRP+++DPALRR GRFDRE+ IG P R +L+
Sbjct: 356 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 415
Query: 387 IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEIL 446
+ T M +S VDL +A+ T GYVGADL ALC EAAL + L E +
Sbjct: 416 VITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL--------LHSE----KNK 463
Query: 447 NSMAVTDEHFKTALGTSNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHP 504
++ A+ + F A PS+ R + +++ V+WE IGGLE+VK +L++++++P++ P
Sbjct: 464 DNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 523
Query: 505 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 564
+F + G++ KGVL YGPPGC KT L +A+A C +F+SV G +L + + G+SE +
Sbjct: 524 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 583
Query: 565 EIFDKARQSAPCVLFFDELDSI 586
++F +AR + P ++F DE+DSI
Sbjct: 584 QVFRQARANTPAIVFLDEIDSI 605
Score = 278 (102.9 bits), Expect = 5.9e-39, Sum P(2) = 5.9e-39
Identities = 53/137 (38%), Positives = 84/137 (61%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++ +GG+ ++++ +E PL+ P+ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 497 VDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 556
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTHG 322
F ++G ++ S G+SE L + F +A N P+I+F+DEIDSI R KT
Sbjct: 557 SCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSISKTEC 616
Query: 323 EVERRIVSQLLTLMDGL 339
V+ R++S LL +DG+
Sbjct: 617 NVQERVLSVLLNELDGV 633
Score = 219 (82.2 bits), Expect = 5.9e-39, Sum P(2) = 5.9e-39
Identities = 59/147 (40%), Positives = 80/147 (54%)
Query: 344 HVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERI 403
+V+++ ATNRP+ +D AL R GR D+ I I PDE GRL +L++ TKNM + DV LE I
Sbjct: 657 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 716
Query: 404 AKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTS 463
A +T + GADL LC EAAL ++E LE T V EHF +L T
Sbjct: 717 AAETCFFSGADLGNLCKEAALLALQEN----GLEATT----------VKQEHFLKSLKTV 762
Query: 464 NPSALRETVVEVPNV-NWEDIGGLENV 489
PS E + N+ + LE++
Sbjct: 763 KPSLSPEDLTLYENLFQKQGFSNLEDI 789
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 157/384 (40%), Positives = 246/384 (64%)
Query: 210 VGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAF 269
+GG+ + +REL+ LPLR+P+ ++G+ P+G+LL GPPG GKT + RAVA E GA
Sbjct: 192 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 251
Query: 270 FFCINGPEIMSKLAGESESNLRKAFEEAEKNA---PSIIFIDEIDSIAPKREKTHGEVER 326
++ P + GE+E N+R+ F A + A P+++F+DE+D++ P+R H E
Sbjct: 252 LLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAHRAPES 311
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R V+Q+LTL+DG++ V+V+ +TNRP+++DPALRR GRFDRE+ IG P R +L+
Sbjct: 312 RAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQ 371
Query: 387 IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEIL 446
+ T M +S VDL +A+ T GYVGADL ALC EAAL + L E +
Sbjct: 372 VITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL--------LHSE----KNK 419
Query: 447 NSMAVTDEHFKTALGTSNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHP 504
++ A+ + F A PS+ R + +++ V+WE IGGLE+VK +L++++++P++ P
Sbjct: 420 DNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKFP 479
Query: 505 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA--N 562
+F + G++ KGVL YGPPGC KT L +A+A C +F+SV G +L + + G+SE +
Sbjct: 480 REFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLS 539
Query: 563 VREIFDKARQSAPCVLFFDELDSI 586
+++F +AR + P ++F DE+DSI
Sbjct: 540 QQKVFRQARANTPAIVFLDEIDSI 563
Score = 273 (101.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 54/139 (38%), Positives = 85/139 (61%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++ +GG+ ++++ +E PL+ P+ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 453 VDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 512
Query: 265 ETGAFFFCINGPEIMSKLAGESESNL--RKAFEEAEKNAPSIIFIDEIDSIAPKRE--KT 320
F ++G ++ S G+SE L +K F +A N P+I+F+DEIDSI R KT
Sbjct: 513 SCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSRSISKT 572
Query: 321 HGEVERRIVSQLLTLMDGL 339
V+ R++S LL +DG+
Sbjct: 573 ECNVQERVLSVLLNELDGV 591
Score = 219 (82.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 59/147 (40%), Positives = 80/147 (54%)
Query: 344 HVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERI 403
+V+++ ATNRP+ +D AL R GR D+ I I PDE GRL +L++ TKNM + DV LE I
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 674
Query: 404 AKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTS 463
A +T + GADL LC EAAL ++E LE T V EHF +L T
Sbjct: 675 AAETCFFSGADLGNLCKEAALLALQEN----GLEATT----------VKQEHFLKSLKTV 720
Query: 464 NPSALRETVVEVPNV-NWEDIGGLENV 489
PS E + N+ + LE++
Sbjct: 721 KPSLSPEDLTLYENLFQKQGFSNLEDI 747
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 170/447 (38%), Positives = 264/447 (59%)
Query: 149 RPVRKGDLFLVRGGMRS--VEFKVIETDP-PEYCV-VAPDTEIFCEGEPVRREDENRLDE 204
RPV +G + G+ V+ P PE V P T I +P +++
Sbjct: 135 RPVSRGHVVATPPGIPGPVAALHVVSGTPDPEPAGRVTPHTRITLSDKP-----PPQVEP 189
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
G +GG+ + +REL+ LPL +P ++G+ P+G+LL GPPG GKT + RAVA
Sbjct: 190 PGEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAR 249
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA---PSIIFIDEIDSIAPKREKTH 321
E GA ++ P + GE+E N+R+ F+ A++ A PS++F+DE+D++ P+R
Sbjct: 250 EAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQ 309
Query: 322 GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
E R+V+Q+LTL+DG+ V+V+GATNRP+ +DPALRR GRFDRE+ IG P R
Sbjct: 310 RAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQR 369
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
+L + T M +S +DL +A+ T GYVGADL ALC EAA + L++E
Sbjct: 370 EAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCAL--------LKNEKN 421
Query: 442 DAEILNSMAVTDEHFKTALGTSNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQY 499
N+ + + F A PS+ R ++ ++ V WE IGGLE+VK +L++ V++
Sbjct: 422 Q----NNPKIEETDFLEAFKKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEW 477
Query: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
P++ P++F + G++ KG+L YGPPGC KT L +A+A C +F+SV G +L + + G+S
Sbjct: 478 PLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDS 537
Query: 560 EANVREIFDKARQSAPCVLFFDELDSI 586
E + ++F +AR + P ++F DE+DS+
Sbjct: 538 EKVLSQVFRQARANTPALVFLDEIDSV 564
Score = 271 (100.5 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 53/140 (37%), Positives = 84/140 (60%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
VG++ +GG+ ++++ VE PL+ PQ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 456 VGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALAT 515
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-THG- 322
F + G ++ S G+SE L + F +A N P+++F+DEIDS+ R + G
Sbjct: 516 SCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGC 575
Query: 323 EVERRIVSQLLTLMDGLKSR 342
+ R++S LL +DG+ R
Sbjct: 576 DARERVLSVLLNELDGVGVR 595
Score = 208 (78.3 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 63/193 (32%), Positives = 100/193 (51%)
Query: 296 EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPN 355
+A + S++ ++E+D + + VERR + SR+ +IV+ ATNRP+
Sbjct: 576 DARERVLSVL-LNELDGVGVRT------VERRGSKASQQECQEILSRSVMIVV-ATNRPD 627
Query: 356 SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADL 415
+D AL R GR D+ + + PD GRL +L++ T NM + +V LE +A +T + GADL
Sbjct: 628 VLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAETCYFSGADL 687
Query: 416 AALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV 475
LC EAAL ++E LE T++ EHF AL T PS + +
Sbjct: 688 RNLCKEAALFALQEN----GLEATTVE----------QEHFTEALKTVKPSLTLKDLTFY 733
Query: 476 PNVNWEDIGGLEN 488
N+ +++ LE+
Sbjct: 734 ENLFKKELSNLED 746
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 466 (169.1 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 108/276 (39%), Positives = 166/276 (60%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + + + +VG ++ ++ + P+ P+ F ++G+KP GILL+GPPG G
Sbjct: 492 KREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGPPGCG 551
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVAN + A F I GPE+++K GESE N+R+ F A+ +AP I+F DE+D++
Sbjct: 552 KTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDALV 611
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P R+ T R+V+ LLT +DG+ R + VIGATNRP+SID A+RR GR +I +G
Sbjct: 612 PTRDFTMSGATSRVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVG 671
Query: 375 VPDEVGRLEVLR-IHTKNM---KLSDDV--DLERIAKDTH-G-YVGADLAALCTEAALQC 426
+P R ++LR I+ + + D V +ER+A+D G + GADL L T A+ C
Sbjct: 672 LPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTAASEAC 731
Query: 427 -IREKMD---VIDLED-ETIDAEILNSMAVTDEHFK 457
IR + D +I ED E E+ S+ D++ +
Sbjct: 732 MIRVQDDEAPMISEEDWERALDEVKPSVKDIDKYME 767
Score = 426 (155.0 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 76/153 (49%), Positives = 107/153 (69%)
Query: 434 IDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKREL 493
ID ++ +D + +T H K A+ P+A RE VPN W ++G L+NV+++L
Sbjct: 459 IDNQEMQLDQND-EDICITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKL 517
Query: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 553
+ + P+E PEKF G+ PS G+L +GPPGCGKTL+AKA+AN +ANFIS+KGPELL
Sbjct: 518 EYAIVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLN 577
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ GESE NVR++F +A+ SAPC+LFFDELD++
Sbjct: 578 KYVGESEYNVRQLFSRAKSSAPCILFFDELDAL 610
Score = 414 (150.8 bits), Expect = 3.4e-78, Sum P(2) = 3.4e-78
Identities = 88/224 (39%), Positives = 143/224 (63%)
Query: 208 DDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETG 267
+D+GG+ + + + + + LPLR + + +G KP ILL+GP G+GKT + RA+A+
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 268 AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERR 327
F ++ ++S ++GESE N+R+AF+EA + AP ++F+DE+D +A K + +E R
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVR 316
Query: 328 IVSQLLTLMDGL----KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
+ S++ +D + +V+VI ATNRP+SI+P +RR RF +E+++ +PDE R
Sbjct: 317 MSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RF-QELEMSMPDEAARES 373
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI 427
+LR T+N +LSDDVD +A+ T GYVGADLA AA + +
Sbjct: 374 ILRTMTRNKRLSDDVDFTALARLTPGYVGADLATAVDFAASEAM 417
Score = 223 (83.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 41/107 (38%), Positives = 66/107 (61%)
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
ED+GG+ + L++ + P+ E++ + G P +L +GP G GKT + +A+A+ Q
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
F+ V L++ GESE N+RE FD+A + APC+LF DE+D +A
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVA 303
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 133/237 (56%), Positives = 178/237 (75%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y+D+GG+ KQM +IRE+VELPL+HP+LF+ +G++PPKGILLYGPPG+GKTL+A+AVA
Sbjct: 167 VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVAT 226
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THG 322
ET A F + G E++ K GE S ++ F+ A++ APSIIFIDEID+IA KR T G
Sbjct: 227 ETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGG 286
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + QLL MDG +R V +IGATNRP+ +DPA+ R GRFDR I++ PDE GR
Sbjct: 287 DREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGR 346
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L+IHT+ M L++DV+LE IAK T G VGA+L A+CTEA + IRE D + ++D
Sbjct: 347 LEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403
Score = 337 (123.7 bits), Expect = 5.7e-30, P = 5.7e-30
Identities = 63/118 (53%), Positives = 85/118 (72%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E PNV +EDIGGLE +E++E V+ P++HPE FEK G+ P KG+L YGPPG GKTLL
Sbjct: 161 VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLL 220
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+A E A FI V G EL+ + GE + V++IF A++ AP ++F DE+D+IA +
Sbjct: 221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
>UNIPROTKB|C9IZA5 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043234 GO:GO:0051260 GO:GO:0016887 GO:GO:0006919
GO:GO:0006511 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0070842 EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP
IPI:IPI00915799 ProteinModelPortal:C9IZA5 SMR:C9IZA5 STRING:C9IZA5
PRIDE:C9IZA5 Ensembl:ENST00000448530 HOGENOM:HOG000184195
ArrayExpress:C9IZA5 Bgee:C9IZA5 Uniprot:C9IZA5
Length = 160
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 117/160 (73%), Positives = 143/160 (89%)
Query: 51 MEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQC 110
M++LQ FRGDT+L+KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C
Sbjct: 1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60
Query: 111 ADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKV 170
DVKYGKR+H+LP+DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV
Sbjct: 61 PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV 120
Query: 171 IETDPPEYCVVAPDTEIFCEGEPVRREDENR-LDEVGYDD 209
+ETDP YC+VAPDT I CEGEP++REDE L+EVGYDD
Sbjct: 121 VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 160
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 509 (184.2 bits), Expect = 2.8e-48, P = 2.8e-48
Identities = 98/238 (41%), Positives = 158/238 (66%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG + +++ +E PL H F+ +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 532 VQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALAT 591
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E+ F I GPE+ S GESE +R+ F +A + AP+I+F DEID+I +R + G
Sbjct: 592 ESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGSS 651
Query: 324 ----VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
V+ R+++QLLT +DG+++ +V ++ ATNRP+ ID AL R GR DR + +G+P
Sbjct: 652 SGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCE 711
Query: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
R E+L+I + M +S+DVD+E++ + T GY GA++ A+C EAAL+ + + + D++
Sbjct: 712 ARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVK 769
Score = 413 (150.4 bits), Expect = 9.9e-66, Sum P(2) = 9.9e-66
Identities = 68/132 (51%), Positives = 99/132 (75%)
Query: 455 HFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
H + AL PSA+RE ++E PNV W DIGG ++ +Q+ +++P+ H +KF++ G+ P
Sbjct: 509 HLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKP 568
Query: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574
+G+L +GPPGC KT++AKA+A E + NF+S+KGPEL +MW GESE VRE+F KARQ A
Sbjct: 569 PRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628
Query: 575 PCVLFFDELDSI 586
P ++FFDE+D+I
Sbjct: 629 PAIVFFDEIDAI 640
Score = 318 (117.0 bits), Expect = 9.9e-66, Sum P(2) = 9.9e-66
Identities = 82/272 (30%), Positives = 151/272 (55%)
Query: 171 IETDPPEYCVVAPDTEI-FCEGEPVRREDENRLDE-VGYDDVGGVRKQMAQIRELVELPL 228
+++ P ++ V T++ + ++E+E ++ + +GG+ +Q+ + E +E L
Sbjct: 233 LDSKPLQFIQVTNVTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESMEYAL 292
Query: 229 RHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA---VANETG---AFFFCINGPEIMSKL 282
L G++ +G+LLYG G GK+++ A VA E IN E+ SK
Sbjct: 293 GFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVYSKF 350
Query: 283 AGESESNLRKAFEEAEKNAP--SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLK 340
GE+E L FE A + P +++ I+++ ++ PK+E + ++ +R+ L+L+D L
Sbjct: 351 LGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENS--DLVKRVSLAFLSLLDQLS 408
Query: 341 SRAHV-----IVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK-- 393
S + + V+ +++ +++ P++RR GR D E+++G P RLE++R K+++
Sbjct: 409 SPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVRCLIKSVEHQ 468
Query: 394 LSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
LSD+ ++E +A THGYVGADLA L A LQ
Sbjct: 469 LSDE-EVEHVASITHGYVGADLANLVYAAMLQ 499
Score = 50 (22.7 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 461 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK--GV 518
G+S+ S+++E V+ + + L+NV T+ P+ +K + P + +
Sbjct: 649 GSSSGSSVKERVLTQLLTELDGVEALQNV------TIVAATNRPDMIDKALLRPGRIDRI 702
Query: 519 LFYGPPGC 526
L+ G P C
Sbjct: 703 LYVGLPQC 710
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 578 (208.5 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 128/274 (46%), Positives = 175/274 (63%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA- 263
+ + VGG+ + Q++E+V LPL +P+L+++ + PP+G+L +GPPG+GKTL+ARA+A
Sbjct: 397 IDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALAA 456
Query: 264 ----NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
+E FF G + +SK GE+E LR FEEA+ PSIIF DEID +AP R
Sbjct: 457 SCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRSS 516
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDG+ +R VIVIGATNRP++IDPALRR GRFDRE +PD
Sbjct: 517 KQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLPDLG 576
Query: 380 GRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
R E+L+IHT+ N +L D + LER+A+ T GY GADL ALCTEAAL I+ K I
Sbjct: 577 SRKEILKIHTRKWNPELPD-LFLERLAQLTKGYGGADLRALCTEAALNSIQRKYPQIYGT 635
Query: 438 DETIDAEILNSMAVTDEHFKTALGTSNPSALRET 471
+E + + + V + F A+ PS+ R T
Sbjct: 636 NEKLKVNP-SKVKVIAKDFMKAIEKIVPSSARST 668
Score = 268 (99.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 47/116 (40%), Positives = 78/116 (67%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+++ +GGL+N +L+E V P+ +PE ++ F ++P +GVLF+GPPG GKTL+A+A+A
Sbjct: 396 NIDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALA 455
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
C + F KG + L+ W GE+E +R +F++A+ P ++FFDE+D +A
Sbjct: 456 ASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLA 511
Score = 72 (30.4 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES----EANVREIFDKARQS 573
+L G G G+ L+ A+ N + V+ +L TM FGE E+ + + F +AR+
Sbjct: 749 LLISGNEGNGQQYLSAAVLNHLEG--FQVQSLDLGTM-FGEPTRTPESTIVQAFIEARRH 805
Query: 574 APCVLFFDELD 584
P +LF +D
Sbjct: 806 QPAILFIPNID 816
Score = 39 (18.8 bits), Expect = 4.2e-61, Sum P(3) = 4.2e-61
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 33 VDEAINDDNSVVVLHPDTMEKLQFFRGDTILIK 65
V+E+ +DD +VL D E ++ R D ++K
Sbjct: 117 VEESEDDD---IVLSADDEEFVEKKRTDNFIVK 146
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 479 (173.7 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 115/311 (36%), Positives = 180/311 (57%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK-PPKGILLYGPPGS 253
+RE + +V +DD+G + + Q+ + P++ F ++G+ P+GILL GPPG
Sbjct: 520 KREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGC 579
Query: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 313
GKTL+A+AVANETG F + GPE+++ GESE +R F+ A + P +IF DEID++
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 314 APKREKTHGEVE--RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
PKR +HGE R+V+QLLT MDG++ R V +IGATNRP+ +D A+ R GR D+ +
Sbjct: 640 VPKR--SHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKIL 697
Query: 372 DIGVPDEVGRLEVLRIHTKN---MKLSDDVDLERIAK--DTHGYVGADLAALCTEAALQC 426
+ P R+++LR TKN L +D+D IA+ + G+ GADLAAL E++L
Sbjct: 698 FVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLA 757
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 486
++ + V++ DE++ V HF+ A S +R +V E +E + +
Sbjct: 758 LQAR--VLE-NDESVKG-------VGMRHFREAA-----SRIRPSVTEADRKKYEHMKKI 802
Query: 487 ENVKRELQETV 497
+K+ +V
Sbjct: 803 YGLKQATPPSV 813
Score = 390 (142.3 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 73/151 (48%), Positives = 105/151 (69%)
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+D + +E+ + ++ E F+ AL T P+A RE VP+V+W+DIG L V+++L+ +
Sbjct: 489 DDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWS 548
Query: 497 VQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 555
+ YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+
Sbjct: 549 ILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMY 608
Query: 556 FGESEANVREIFDKARQSAPCVLFFDELDSI 586
GESE VR +F +AR S PCV+FFDE+D++
Sbjct: 609 VGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Score = 299 (110.3 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 55/139 (39%), Positives = 93/139 (66%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
R V ++ +GG +Q ++ L + L+ P+ F ++GV PP+G +++GPPG GKT+ A+
Sbjct: 199 RESHVKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQ 257
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E + E++S ++GE+E +R+ F+ A++N+P I+ +D+ID+IAP+RE
Sbjct: 258 AVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETA 317
Query: 321 HGEVERRIVSQLLTLMDGL 339
E+ERR+VSQL + +D L
Sbjct: 318 QREMERRVVSQLCSSLDEL 336
Score = 222 (83.2 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 40/111 (36%), Positives = 69/111 (62%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V +E IGG + E+ + ++ P+ F G+ P +G + +GPPGCGKT+ A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E + + EL++ GE+E +R +FD A+Q++PC+L D++D+IA
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311
Score = 219 (82.2 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 55/129 (42%), Positives = 75/129 (58%)
Query: 343 AHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER 402
A V+VIG T+RP+++D LRR GRF+ EI +G+PDE R ++L K + L+ DV L++
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQ 427
Query: 403 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI-DAEILNSMAVTDEHFKTALG 461
IAK T GYVGADL AL EAA I D I +++E + + D G
Sbjct: 428 IAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQG 487
Query: 462 TSNPSALRE 470
+PSAL E
Sbjct: 488 DDDPSALSE 496
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 479 (173.7 bits), Expect = 6.3e-45, P = 6.3e-45
Identities = 115/311 (36%), Positives = 180/311 (57%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK-PPKGILLYGPPGS 253
+RE + +V +DD+G + + Q+ + P++ F ++G+ P+GILL GPPG
Sbjct: 520 KREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGC 579
Query: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 313
GKTL+A+AVANETG F + GPE+++ GESE +R F+ A + P +IF DEID++
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 314 APKREKTHGEVE--RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
PKR +HGE R+V+QLLT MDG++ R V +IGATNRP+ +D A+ R GR D+ +
Sbjct: 640 VPKR--SHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKIL 697
Query: 372 DIGVPDEVGRLEVLRIHTKN---MKLSDDVDLERIAK--DTHGYVGADLAALCTEAALQC 426
+ P R+++LR TKN L +D+D IA+ + G+ GADLAAL E++L
Sbjct: 698 FVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLA 757
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 486
++ + V++ DE++ V HF+ A S +R +V E +E + +
Sbjct: 758 LQAR--VLE-NDESVKG-------VGMRHFREAA-----SRIRPSVTEADRKKYEHMKKI 802
Query: 487 ENVKRELQETV 497
+K+ +V
Sbjct: 803 YGLKQATPPSV 813
Score = 390 (142.3 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 73/151 (48%), Positives = 105/151 (69%)
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+D + +E+ + ++ E F+ AL T P+A RE VP+V+W+DIG L V+++L+ +
Sbjct: 489 DDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWS 548
Query: 497 VQYPVEHPEKFEKFGMS-PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMW 555
+ YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+
Sbjct: 549 ILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMY 608
Query: 556 FGESEANVREIFDKARQSAPCVLFFDELDSI 586
GESE VR +F +AR S PCV+FFDE+D++
Sbjct: 609 VGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Score = 299 (110.3 bits), Expect = 1.5e-60, Sum P(2) = 1.5e-60
Identities = 55/139 (39%), Positives = 93/139 (66%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
R V ++ +GG +Q ++ L + L+ P+ F ++GV PP+G +++GPPG GKT+ A+
Sbjct: 199 RESHVKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQ 257
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E + E++S ++GE+E +R+ F+ A++N+P I+ +D+ID+IAP+RE
Sbjct: 258 AVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETA 317
Query: 321 HGEVERRIVSQLLTLMDGL 339
E+ERR+VSQL + +D L
Sbjct: 318 QREMERRVVSQLCSSLDEL 336
Score = 222 (83.2 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 40/111 (36%), Positives = 69/111 (62%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V +E IGG + E+ + ++ P+ F G+ P +G + +GPPGCGKT+ A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E + + EL++ GE+E +R +FD A+Q++PC+L D++D+IA
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311
Score = 219 (82.2 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 55/129 (42%), Positives = 75/129 (58%)
Query: 343 AHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER 402
A V+VIG T+RP+++D LRR GRF+ EI +G+PDE R ++L K + L+ DV L++
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQ 427
Query: 403 IAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI-DAEILNSMAVTDEHFKTALG 461
IAK T GYVGADL AL EAA I D I +++E + + D G
Sbjct: 428 IAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQG 487
Query: 462 TSNPSALRE 470
+PSAL E
Sbjct: 488 DDDPSALSE 496
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 598 (215.6 bits), Expect = 3.8e-57, P = 3.8e-57
Identities = 153/399 (38%), Positives = 223/399 (55%)
Query: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
+++ +DD+GG+ + + ++E+V PL +P+ F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 376 EDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARAL 435
Query: 263 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 436 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 495
Query: 318 EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
++ IVS LL LMDGL SR V++IGATNR ++ID ALRR GRFDRE + +P
Sbjct: 496 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPG 555
Query: 378 EVGRLEVLRIHTKNMKLSDDVDL-ERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
R E+L IHT+ K +L E +A GY GADL ALCTEAA++ REK +
Sbjct: 556 CEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQVYT 615
Query: 437 EDE--TIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
D+ ID ++N V HF A+ P+A R +VV+ ++ + L E
Sbjct: 616 SDDKYAIDVGLVN---VEKSHFVEAMSAITPAAHRGSVVQSRPLSPVVLPCLHRHLLESM 672
Query: 495 ETVQ--YPVEHPE-KFEK-----FGMS-P---SKGVLFYGPPGCGKTLLAKAIANECQAN 542
+ +P + K FG + P +L G G G L AI +E +
Sbjct: 673 SLISDIFPSSATSSELTKLSILTFGSAIPLVYRPRLLLLGGEGVGLDHLGPAILHELEKF 732
Query: 543 FISVKG-PELLTMWFGES-EANVREIFDKARQSAPCVLF 579
I G P LL+ ++ E + IF +AR++ P +L+
Sbjct: 733 PIHSLGLPSLLSDPGAKTPEEALVHIFSEARRTTPSILY 771
Score = 249 (92.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 45/116 (38%), Positives = 79/116 (68%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
++N++DIGGL +L+E V +P+ +PE F + ++P +GVL GPPG GKTL+A+A+A
Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
Query: 537 NEC-----QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+ +F KG ++L+ W GE+E ++ +F++A+++ P ++FFDE+D +A
Sbjct: 437 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 492
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 585 (211.0 bits), Expect = 4.7e-57, Sum P(2) = 4.7e-57
Identities = 131/317 (41%), Positives = 192/317 (60%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +LD V +D VGG+ +A ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 401 DPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 460
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + PSIIF DEID
Sbjct: 461 LVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEID 520
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 521 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 580
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+PD+ R E+L+IHT++ D+ LE +A+++ GY GAD+ ++C+EAAL +R +
Sbjct: 581 LFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENSVGYCGADIKSVCSEAALCALRRR 640
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG--LEN 488
I E + + L+S+ ++ + F+ A+ P++ R V P I L++
Sbjct: 641 YPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQR--AVTSPGQALSTIVKPLLQS 697
Query: 489 VKRELQETVQYPVEHPE 505
++ E +Q H E
Sbjct: 698 TVHKILEALQRVFPHAE 714
Score = 288 (106.4 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 55/116 (47%), Positives = 77/116 (66%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 408 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 467
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 468 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 523
Score = 43 (20.2 bits), Expect = 4.7e-57, Sum P(2) = 4.7e-57
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 146 EAYRPVRKGDLFL-VRGGMRSVEFKVIET-DPPEYCVVAPDTEIFCEGEPVRREDENRLD 203
E + +G+L + RG + ++ ET D E V + + EGE EDE+ +
Sbjct: 205 EVFNETEEGNLNMYTRGKQKDIQRTDEETTDNQEGSVESSE-----EGEDQEDEDEDDEE 259
Query: 204 EVGYDD 209
E DD
Sbjct: 260 EEDDDD 265
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 566 (204.3 bits), Expect = 6.6e-57, Sum P(2) = 6.6e-57
Identities = 123/274 (44%), Positives = 175/274 (63%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA- 263
V +DD+GG+ + Q++E+V LPL +P+L+++ + PP+G+L +GPPG+GKTL+ARA+A
Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469
Query: 264 ----NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
+E FF G +I+SK GE+E LR FEEA+K+ PSIIF DEID +AP R
Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSS 529
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDG+ +R VIVIGATNRP+++DPALRR GRFDRE +PD
Sbjct: 530 KQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVK 589
Query: 380 GRLEVLRIHTKNMK--LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
R ++L+I T+ LS + ++++A T GY GADL +LCTEAAL I+ I
Sbjct: 590 ARFKILQIQTRKWSSPLSTNF-IDKLAFLTKGYGGADLRSLCTEAALISIQRSFPQIYRS 648
Query: 438 DETIDAEILNSMAVTDEHFKTALGTSNPSALRET 471
++ + + + + V F AL PS+ R T
Sbjct: 649 NDKLLVDP-SKIKVKVSDFMLALKKIVPSSARST 681
Score = 289 (106.8 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 61/163 (37%), Positives = 102/163 (62%)
Query: 436 LEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV-P-----NVNWEDIGGLENV 489
L+ ++ D EIL + VT + K T + + ++ P NVN++DIGGL+N
Sbjct: 365 LDSDSSDDEIL-PLGVTPKTKKE--NTQKKKKKKPEIADLDPLGVDMNVNFDDIGGLDNY 421
Query: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN-----FI 544
+L+E V P+ +PE ++ F ++P +GVLF+GPPG GKTL+A+A+A C ++ F
Sbjct: 422 IDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFF 481
Query: 545 SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KG ++L+ W GE+E +R +F++A++ P ++FFDE+D +A
Sbjct: 482 MRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLA 524
Score = 61 (26.5 bits), Expect = 6.6e-57, Sum P(2) = 6.6e-57
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES---EANVREIFDKARQSA 574
+L GP G G+ + AI N + +V+ +L ++ S EA V + F +A++
Sbjct: 772 LLINGPKGNGQQYVGAAILNYLEE--FNVQNLDLASLVSESSRTIEAAVVQSFMEAKKRQ 829
Query: 575 PCVLFFDELD 584
P V+F LD
Sbjct: 830 PSVVFIPNLD 839
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 123/264 (46%), Positives = 175/264 (66%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +GV PP+G+LL+GPPG GKTL+
Sbjct: 139 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 197
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + PEI+S ++GESE LR+ FE+A NAP IIFIDEID+I PKRE
Sbjct: 198 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 257
Query: 319 KTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 258 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 317
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI-REKMDVI 434
PDE R +L+ + ++L D +A T G+VGADL ALC EAA+ + R M +
Sbjct: 318 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 377
Query: 435 DLEDETIDAEILNSMAVTDEHFKT 458
+ + + + E L S V +E T
Sbjct: 378 EQQKKNPEMEDLPSKGVQEERLGT 401
Score = 501 (181.4 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 103/242 (42%), Positives = 155/242 (64%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + P+R+P FK++G+ P G+LL GPPG G
Sbjct: 451 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 510
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 511 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 570
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 571 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 630
Query: 375 VPDEVGRLEVLRIHTKN-MK--LSDDVDLERIAKDTHG--YVGADLAALCTEAALQCIRE 429
+P RL +L+ TKN K L DV+LE IA D Y GADL+AL EA++ +R+
Sbjct: 631 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 690
Query: 430 KM 431
+M
Sbjct: 691 EM 692
Score = 406 (148.0 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/177 (46%), Positives = 111/177 (62%)
Query: 412 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
G L TE + E ++ L + + + E + + + F AL + PSA R
Sbjct: 393 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 452
Query: 470 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
E V VPNV W DIG LE+++ EL + PV +P++F+ G+ GVL GPPGCGKT
Sbjct: 453 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 512
Query: 530 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
LLAKA+ANE NFISVKGPELL M+ GESE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 513 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 569
Score = 268 (99.4 bits), Expect = 7.5e-20, P = 7.5e-20
Identities = 49/113 (43%), Positives = 77/113 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
++ NV +ED+GG + +E+ + + + + HPE + G+ P +GVL +GPPGCGKTLLA
Sbjct: 141 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 199
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V PE+++ GESE +RE+F++A +APC++F DE+D+I
Sbjct: 200 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAI 252
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 123/264 (46%), Positives = 175/264 (66%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +GV PP+G+LL+GPPG GKTL+
Sbjct: 150 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 208
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + PEI+S ++GESE LR+ FE+A NAP IIFIDEID+I PKRE
Sbjct: 209 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 268
Query: 319 KTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 269 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 328
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI-REKMDVI 434
PDE R +L+ + ++L D +A T G+VGADL ALC EAA+ + R M +
Sbjct: 329 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 388
Query: 435 DLEDETIDAEILNSMAVTDEHFKT 458
+ + + + E L S V +E T
Sbjct: 389 EQQKKNPEMEDLPSKGVQEERLGT 412
Score = 406 (148.0 bits), Expect = 3.1e-36, P = 3.1e-36
Identities = 82/177 (46%), Positives = 111/177 (62%)
Query: 412 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
G L TE + E ++ L + + + E + + + F AL + PSA R
Sbjct: 404 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 463
Query: 470 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
E V VPNV W DIG LE+++ EL + PV +P++F+ G+ GVL GPPGCGKT
Sbjct: 464 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 523
Query: 530 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
LLAKA+ANE NFISVKGPELL M+ GESE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 524 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 580
Score = 279 (103.3 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 50/123 (40%), Positives = 81/123 (65%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + P+R+P FK++G+ P G+LL GPPG G
Sbjct: 462 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 521
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 522 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 581
Query: 315 PKR 317
P+R
Sbjct: 582 PRR 584
Score = 268 (99.4 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 49/113 (43%), Positives = 77/113 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
++ NV +ED+GG + +E+ + + + + HPE + G+ P +GVL +GPPGCGKTLLA
Sbjct: 152 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 210
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V PE+++ GESE +RE+F++A +APC++F DE+D+I
Sbjct: 211 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAI 263
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 575 (207.5 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 122/270 (45%), Positives = 168/270 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + VGG++ + Q++E++ LPL +P+LF+ V PP+G+L +GPPG+GKTL+ARA++N
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 265 ETGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
G F+ G + +SK GE+E LR FEEA + PSIIF DEID +AP R
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVRSS 736
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDG+ R VIVIGATNRP+S+DPALRR GRFDRE +PD
Sbjct: 737 KQEQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPDVE 796
Query: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
GR ++ IHTK+ L+DD + +A+ T GY GADL ALCTEAAL I+ I +
Sbjct: 797 GRRSIIDIHTKDWGLADDFK-DSLARQTKGYGGADLRALCTEAALNSIQRTYPQIYSSTD 855
Query: 440 TIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ + N +++ F + PS+ R
Sbjct: 856 KLIVDP-NKVSIHATDFTIVMKKIIPSSQR 884
Score = 254 (94.5 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 46/115 (40%), Positives = 79/115 (68%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V++ +GGL+ +L+E + P+ +PE F+++ ++P +GVLF+GPPG GKTLLA+A++N
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 538 EC-----QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+ F KG + L+ W GE+E +R +F++AR++ P ++FFDE+D +A
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLA 731
Score = 53 (23.7 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES--EANVREIFDKARQSAP 575
+L G PG G+ ++ A+ + + F V+ +L T+ S E + +F + ++ P
Sbjct: 959 LLIAGRPGNGQEYISAALLHHLEGVF--VQNFDLATLLADGSPLEQVIVRLFTEVKRHKP 1016
Query: 576 CVLFFDEL 583
V+F ++
Sbjct: 1017 AVIFIPDV 1024
Score = 42 (19.8 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 295 EEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTL 335
EE E+ ++ DS APKR K E + S+++TL
Sbjct: 116 EEIEETTDGDEDDEDEDSSAPKRNKKVAEKSKP--SKIVTL 154
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 585 (211.0 bits), Expect = 1.4e-56, P = 1.4e-56
Identities = 123/264 (46%), Positives = 175/264 (66%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +GV PP+G+LL+GPPG GKTL+
Sbjct: 256 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 314
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + PEI+S ++GESE LR+ FE+A NAP IIFIDEID+I PKRE
Sbjct: 315 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 374
Query: 319 KTHGEVERRIVSQLLTLMDGLKS---RAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 375 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 434
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI-REKMDVI 434
PDE R +L+ + ++L D +A T G+VGADL ALC EAA+ + R M +
Sbjct: 435 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 494
Query: 435 DLEDETIDAEILNSMAVTDEHFKT 458
+ + + + E L S V +E T
Sbjct: 495 EQQKKNPEMEDLPSKGVQEERLGT 518
Score = 501 (181.4 bits), Expect = 3.2e-47, P = 3.2e-47
Identities = 103/242 (42%), Positives = 155/242 (64%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + P+R+P FK++G+ P G+LL GPPG G
Sbjct: 568 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 627
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 628 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 687
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 688 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 747
Query: 375 VPDEVGRLEVLRIHTKN-MK--LSDDVDLERIAKDTHG--YVGADLAALCTEAALQCIRE 429
+P RL +L+ TKN K L DV+LE IA D Y GADL+AL EA++ +R+
Sbjct: 748 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
Query: 430 KM 431
+M
Sbjct: 808 EM 809
Score = 406 (148.0 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 82/177 (46%), Positives = 111/177 (62%)
Query: 412 GADLAALCTEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
G L TE + E ++ L + + + E + + + F AL + PSA R
Sbjct: 510 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 569
Query: 470 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
E V VPNV W DIG LE+++ EL + PV +P++F+ G+ GVL GPPGCGKT
Sbjct: 570 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629
Query: 530 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
LLAKA+ANE NFISVKGPELL M+ GESE VR++F +A+ SAPCV+FFDE+D++
Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 686
Score = 268 (99.4 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 49/113 (43%), Positives = 77/113 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
++ NV +ED+GG + +E+ + + + + HPE + G+ P +GVL +GPPGCGKTLLA
Sbjct: 258 QISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAH 316
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V PE+++ GESE +RE+F++A +APC++F DE+D+I
Sbjct: 317 AIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAI 369
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 588 (212.0 bits), Expect = 6.2e-56, P = 6.2e-56
Identities = 124/279 (44%), Positives = 178/279 (63%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +LD V +D VGG+ +A ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 395 DPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 454
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + PSIIF DEID
Sbjct: 455 LVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEID 514
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 515 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 574
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+PD+ R E+L+IHT++ D+ LE +A++ GY GAD+ ++C+EAAL +R +
Sbjct: 575 LFSLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIKSICSEAALCALRRR 634
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
I E + + L+S+ ++ + F+ A+ P+A R
Sbjct: 635 YPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPAAQR 672
Score = 288 (106.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 55/116 (47%), Positives = 77/116 (66%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 402 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 461
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 462 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 517
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 559 (201.8 bits), Expect = 8.3e-56, Sum P(2) = 8.3e-56
Identities = 123/280 (43%), Positives = 170/280 (60%)
Query: 198 DENRLD-EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D LD V +D VGG+ + ++E+V PL +PQ+F+ ++PP+G L YGPPG+GKT
Sbjct: 384 DPMNLDTSVKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKT 443
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 444 LVARALANECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 503
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 504 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 563
Query: 372 DIGVPDEVGRLEVLRIHTKNM--KLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L IHT++ KL++ ++ +A+ GY GAD+ ALCTEAAL +R
Sbjct: 564 LFNLPDKKARKHILEIHTRDWSPKLAEPF-IDELAERCVGYCGADIKALCTEAALAALRR 622
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ S+ + + F AL + P+ R
Sbjct: 623 RYPQIYGSSQRYQLDVA-SIVLGPQDFGRALRSIVPAGQR 661
Score = 278 (102.9 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 52/116 (44%), Positives = 79/116 (68%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL + + L+E V +P+ +P+ FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 391 SVKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 450
Query: 537 NEC-----QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC + +F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 451 NECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 506
Score = 58 (25.5 bits), Expect = 8.3e-56, Sum P(2) = 8.3e-56
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 518 VLFYGPPGCGK-TLLAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L GP G G+ T LA A+ + + + + P L ++ E + ++F +AR+ P
Sbjct: 767 LLLTGPQGAGQSTHLAPALLHHLEKFTVHRLDLPTLYSVSAKTPEESCAQVFREARRCVP 826
Query: 576 CVLFFDELDS 585
+++ + +
Sbjct: 827 SIIYMPHISA 836
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 583 (210.3 bits), Expect = 9.2e-56, P = 9.2e-56
Identities = 123/279 (44%), Positives = 176/279 (63%)
Query: 198 DENRLD-EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +LD V +D VGG+ +A ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 70 DPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 129
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + P+IIF DEID
Sbjct: 130 LVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEID 189
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 190 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 249
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+PD+ R E+L+IHT++ D+ LE +A+ GY GAD+ ++C EAAL +R +
Sbjct: 250 LFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALRRR 309
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
I E + + L+S+ ++ + F+ AL P++ R
Sbjct: 310 YPQIYTTSEKLQLD-LSSITISAKDFEAALQKIRPASQR 347
Score = 284 (105.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 77 SVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 136
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 137 NECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLA 192
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 573 (206.8 bits), Expect = 1.0e-55, Sum P(2) = 1.0e-55
Identities = 123/287 (42%), Positives = 179/287 (62%)
Query: 191 GEPVRREDENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYG 249
G+ + D ++D V +D VGG+ ++ ++E+V PL +P++F+ ++PP+G L YG
Sbjct: 346 GKSLADVDPMQIDSSVRFDAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPPRGCLFYG 405
Query: 250 PPGSGKTLIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
PPG+GKTL+ARA+ANE FF G + +SK GESE LR F++A + PSI
Sbjct: 406 PPGTGKTLVARALANECSQGNRRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSI 465
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRF 364
IF DEID +AP R ++ IVS LL LMDGL R V+VIGATNR +SIDPALRR
Sbjct: 466 IFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDGRGEVVVIGATNRLDSIDPALRRP 525
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNM--KLSDDVDLERIAKDTHGYVGADLAALCTEA 422
GRFDRE G+P++ R E+ +IHT++ KL D ++ +A + GY GAD+ +LC EA
Sbjct: 526 GRFDREFLFGLPNKEARKEIFKIHTRDWTPKLLDTF-IDELATECVGYCGADIKSLCAEA 584
Query: 423 ALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
AL +R + I L E + ++ NS+ + + F A+ + P++ R
Sbjct: 585 ALCALRRRYPQIYLSSEKLQLDV-NSIKIKAKDFVMAMQKTVPASQR 630
Score = 283 (104.7 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 55/116 (47%), Positives = 79/116 (68%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL + L+E V +P+ +PE FE+F + P +G LFYGPPG GKTL+A+A+A
Sbjct: 360 SVRFDAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPPRGCLFYGPPGTGKTLVARALA 419
Query: 537 NEC-QAN----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC Q N F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 420 NECSQGNRRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 475
Score = 42 (19.8 bits), Expect = 1.0e-55, Sum P(2) = 1.0e-55
Identities = 12/67 (17%), Positives = 30/67 (44%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPC 576
+L G G G+ LA A+ + + + +L + E ++ +A+++AP
Sbjct: 734 LLLVGKTGYGQASHLAPAVLHALEMFPVHTLDMSVLFVSMSSPEETCAQLIREAQRTAPS 793
Query: 577 VLFFDEL 583
+++ +
Sbjct: 794 IIYIPHI 800
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 586 (211.3 bits), Expect = 1.0e-55, P = 1.0e-55
Identities = 131/317 (41%), Positives = 191/317 (60%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +LD V +D VGG+ +A ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 411 DPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 470
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + PSIIF DEID
Sbjct: 471 LVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEID 530
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 531 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 590
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+PD+ R E+L+IHT++ D+ LE +A++ GY GAD+ ++C+EAAL +R +
Sbjct: 591 LFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIKSICSEAALCALRRR 650
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG--LEN 488
I E + + L+S+ ++ + F+ A+ P++ R V P I L++
Sbjct: 651 YPQIYTTSEKLQLD-LSSITISAKDFEVAMQKMIPASQR--AVTSPGQALSTIVKPLLQS 707
Query: 489 VKRELQETVQYPVEHPE 505
++ E +Q H E
Sbjct: 708 TVHKILEALQRVFPHAE 724
Score = 288 (106.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 55/116 (47%), Positives = 77/116 (66%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 418 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 477
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 478 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 533
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 585 (211.0 bits), Expect = 1.3e-55, P = 1.3e-55
Identities = 131/317 (41%), Positives = 189/317 (59%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +LD V +D VGG+ +A ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 415 DPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 474
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + PSIIF DEID
Sbjct: 475 LVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEID 534
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL SR ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 535 GLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREF 594
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-DVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+PD+ R E+L+IHT++ D LE +A++ GY GAD+ ++C EAAL +R +
Sbjct: 595 LFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRR 654
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG--LEN 488
I E + + L+S+ ++ + F+ A+ P++ R V P + L+N
Sbjct: 655 YPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQR--AVTSPGQALSTVVKPLLQN 711
Query: 489 VKRELQETVQYPVEHPE 505
++ E +Q H E
Sbjct: 712 TVDKILEALQRVFPHAE 728
Score = 288 (106.4 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 55/116 (47%), Positives = 77/116 (66%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL N L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 422 SVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 481
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 482 NECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 537
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 572 (206.4 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 124/283 (43%), Positives = 176/283 (62%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D ++D+ V +D +GG+ K ++ ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 379 DPMQIDQTVRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKT 438
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A + PSIIF DEID
Sbjct: 439 LVARALANECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEID 498
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
IAP R ++ IVS LL LMDGL SR V+VIGATNR +SIDPALRR GRFDRE
Sbjct: 499 GIAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGATNRLDSIDPALRRPGRFDREF 558
Query: 372 DIGVPDEVGRLEVLRIHTKNM--KLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD R ++L+IHT++ +LSD LE +A GY G D+ A+C EAAL +R
Sbjct: 559 LFNLPDREARKDILKIHTRHWDPQLSDAF-LEELADKCVGYCGTDIKAVCAEAALCALRR 617
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV 472
+ I + + ++ S+ V+ F +A+ P++ R V
Sbjct: 618 RYPQIYASSQKLLLDV-ESICVSGRDFLSAMRKIVPASQRAVV 659
Score = 282 (104.3 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 56/115 (48%), Positives = 75/115 (65%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++ IGGL L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+AN
Sbjct: 387 VRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALAN 446
Query: 538 ECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
EC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D IA
Sbjct: 447 ECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGIA 501
Score = 42 (19.8 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFISVKGPELLTMWFGESEANVRE----IFDKARQ 572
+L G G +T LA AI + + + +L +G S A E +F +AR+
Sbjct: 755 LLLCGTSGSAQTSHLAPAILHTLEKFTVYTLDVAVL---YGVSSATPEEACAQVFCEARR 811
Query: 573 SAPCVLFFDEL 583
+AP +++ +
Sbjct: 812 TAPSIVYIPHI 822
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 563 (203.2 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 122/280 (43%), Positives = 172/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 279 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 338
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 339 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 398
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 399 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 458
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 459 LFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 517
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ + + F A+ P++ R
Sbjct: 518 RYPQIYASSHKLQLDV-SSIVLNAQDFYHAMQNIVPASQR 556
Score = 277 (102.6 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 286 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 345
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 346 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 401
Score = 49 (22.3 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 660 LLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 719
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 720 SIVYMPHI 727
Score = 48 (22.0 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 300 NAPSIIFIDEIDSIAPKREKTHGEVER 326
N+ + + E+D+I +R + GEVER
Sbjct: 41 NSTAEAVLQEMDNINIRRNRRSGEVER 67
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 551 (199.0 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 113/253 (44%), Positives = 172/253 (67%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ + Y+ VGG+ KQ+ +I+E++ELP++HP+LF+S+G+ PKGILLYGPPG+GKTL+AR
Sbjct: 138 KIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLAR 197
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +
Sbjct: 198 AVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDS 257
Query: 321 HG-----EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
G EV+R ++ +LL +DG ++ ++ VI ATNR + +DPAL R GR DR+I+
Sbjct: 258 SGGSGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
P R E+LRIH+++M L+ +DL+ IA+ +G GA+L +CTEA + +RE+ +
Sbjct: 317 PSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVT 376
Query: 436 LED-ETIDAEILN 447
ED E A++LN
Sbjct: 377 QEDFELAVAKVLN 389
Score = 309 (113.8 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 74/216 (34%), Positives = 116/216 (53%)
Query: 381 RLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLE 437
RLE R ++ + L +++ L ++ YVG + + L + E V+D+
Sbjct: 40 RLEAQRNGLNARVRLLREEIQL---LQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDIS 96
Query: 438 DETIDAEILNSMAVT---DEH--FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRE 492
+ EI ++ V D + K +P V ++P+ +E +GGLE +E
Sbjct: 97 PDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKE 156
Query: 493 LQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 552
++E ++ PV+HPE FE G+ KG+L YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 157 IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216
Query: 553 TMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
+ GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 217 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 252
Score = 39 (18.8 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 67 KKRKDTVCIALADDTCEEPKIRMNKV 92
K+ K + +AL +D+ + KI NKV
Sbjct: 102 KEIKPNIRVALRNDSYQLIKILPNKV 127
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 563 (203.2 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 122/280 (43%), Positives = 172/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 227 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 286
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 287 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 346
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 347 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 406
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 407 LFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 465
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ + + F A+ P++ R
Sbjct: 466 RYPQIYASSHKLQLDV-SSIVLNAQDFYHAMQNIVPASQR 504
Score = 277 (102.6 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 234 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 293
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 294 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 349
Score = 49 (22.3 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 607 LLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 666
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 667 SIVYMPHI 674
Score = 48 (22.0 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 300 NAPSIIFIDEIDSIAPKREKTHGEVER 326
N+ + + E+D+I +R + GEVER
Sbjct: 28 NSTAEAVLQEMDNINIRRNRRSGEVER 54
Score = 44 (20.5 bits), Expect = 6.3e-55, Sum P(2) = 6.3e-55
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 487 ENVKRELQETV-QYPVEHPEKFEKFGMSPSKGV 518
E+ +E ET+ ++P + PEK E S ++ V
Sbjct: 1144 EDQSKEKPETLNEHPGDDPEKLEALECSSNEKV 1176
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 564 (203.6 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 122/280 (43%), Positives = 173/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 389 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 448
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 449 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 508
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 509 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 568
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 569 LFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 627
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ ++ + F A+ P++ R
Sbjct: 628 RYPQIYASSHKLQLDV-SSIVLSAQDFYHAMQNIVPASQR 666
Score = 277 (102.6 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 396 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 455
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 456 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 511
Score = 49 (22.3 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 769 LLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 828
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 829 SIVYMPHI 836
Score = 49 (22.3 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 272 CINGP-EIMSKLAGES---ES-NLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
CING E+ ES N F++ + + + E+D+I ++ + GEVER
Sbjct: 158 CINGDMEVRKSCRSRKNRFESVNQSLLFDQLVNSTAEAV-LQEMDNINIRQNRRSGEVER 216
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 564 (203.6 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 122/280 (43%), Positives = 173/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 386 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 445
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 446 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 505
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 506 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 565
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 566 LFNLPDQRARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 624
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ ++ + F A+ P++ R
Sbjct: 625 RYPQIYASSHKLQLDV-SSIVLSAQDFYRAMQNIVPASQR 663
Score = 277 (102.6 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 393 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 452
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 453 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 508
Score = 49 (22.3 bits), Expect = 2.5e-55, Sum P(2) = 2.5e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 770 LLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 829
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 830 SIVYMPHI 837
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 573 (206.8 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 121/276 (43%), Positives = 172/276 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
VG+D VGG+ + ++E+V P+ +P++F+ + PPKG++ YGPPG+GKTL+ARA+AN
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN 447
Query: 265 ET--GA---FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
E GA FF G + +SK GESE LR F++A PSIIF DEID +AP R
Sbjct: 448 ECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSS 507
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDGL R V+VIGATNR +++DPALRR GRFDRE+ +PD
Sbjct: 508 KQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLN 567
Query: 380 GRLEVLRIHTKNMKLSDDVD--LERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
R ++L IHT + + + L+ IA+ T GY GADL LCTEA L +R + I +
Sbjct: 568 ARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMC 627
Query: 438 DETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV 473
E + ++ ++ +T EHF A+ P++ R+ +
Sbjct: 628 SERLKLDVA-TIKITSEHFGHAMRRITPASRRDLTI 662
Score = 290 (107.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 56/116 (48%), Positives = 82/116 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL + + L+E V +P+ +PE FEKF ++P KGV+FYGPPG GKTL+A+A+A
Sbjct: 387 SVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALA 446
Query: 537 NECQ--AN---FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC+ AN F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 447 NECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLA 502
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 8/47 (17%), Positives = 24/47 (51%)
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
E GR + + K ++ + + ++R+ K G +D+ + ++++
Sbjct: 342 ERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSV 388
Score = 37 (18.1 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 24/115 (20%), Positives = 48/115 (41%)
Query: 464 NPSALRE--TVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKF-EKFGMSPSKGVLF 520
NPS ++ + ++ N + I L ++ EL E+ +E + + G++P+ L
Sbjct: 994 NPSTTKDGKLIRQMANTLRDAIDDL--IECELDESFVERIETVSRMLQDAGVTPTSDKLL 1051
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
T + K A + + + E+ W E EA +++ K +AP
Sbjct: 1052 --------TEIPKGFARKKAWSMTNSLAKEI-EQWTSEREAENQKMLSKLGVAAP 1097
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 573 (206.8 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 121/276 (43%), Positives = 172/276 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
VG+D VGG+ + ++E+V P+ +P++F+ + PPKG++ YGPPG+GKTL+ARA+AN
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALAN 447
Query: 265 ET--GA---FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
E GA FF G + +SK GESE LR F++A PSIIF DEID +AP R
Sbjct: 448 ECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSS 507
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDGL R V+VIGATNR +++DPALRR GRFDRE+ +PD
Sbjct: 508 KQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLN 567
Query: 380 GRLEVLRIHTKNMKLSDDVD--LERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
R ++L IHT + + + L+ IA+ T GY GADL LCTEA L +R + I +
Sbjct: 568 ARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLRSRYPHIYMC 627
Query: 438 DETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV 473
E + ++ ++ +T EHF A+ P++ R+ +
Sbjct: 628 SERLKLDVA-TIKITSEHFGHAMRRITPASRRDLTI 662
Score = 290 (107.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 56/116 (48%), Positives = 82/116 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ +GGL + + L+E V +P+ +PE FEKF ++P KGV+FYGPPG GKTL+A+A+A
Sbjct: 387 SVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALA 446
Query: 537 NECQ--AN---FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC+ AN F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 447 NECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLA 502
Score = 38 (18.4 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 8/47 (17%), Positives = 24/47 (51%)
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
E GR + + K ++ + + ++R+ K G +D+ + ++++
Sbjct: 342 ERGRFMPINMTEKELQSAQHILMDRMRKTDAGQGASDIDPMSVDSSV 388
Score = 37 (18.1 bits), Expect = 2.9e-55, Sum P(2) = 2.9e-55
Identities = 24/115 (20%), Positives = 48/115 (41%)
Query: 464 NPSALRE--TVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKF-EKFGMSPSKGVLF 520
NPS ++ + ++ N + I L ++ EL E+ +E + + G++P+ L
Sbjct: 994 NPSTTKDGKLIRQMANTLRDAIDDL--IECELDESFVERIETVSRMLQDAGVTPTSDKLL 1051
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
T + K A + + + E+ W E EA +++ K +AP
Sbjct: 1052 --------TEIPKGFARKKAWSMTNSLAKEI-EQWTSEREAENQKMLSKLGVAAP 1097
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 563 (203.2 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 122/280 (43%), Positives = 172/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 392 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 451
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 452 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 511
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 512 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 571
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 572 LFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 630
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ + + F A+ P++ R
Sbjct: 631 RYPQIYASSHKLQLDV-SSIVLNAQDFYHAMQNIVPASQR 669
Score = 277 (102.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 399 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 458
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 459 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 514
Score = 53 (23.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 272 CINGP-EIMSKLAGES---ES-NLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
CING E+ ES N F++ + + + E+D+I +R + GEVER
Sbjct: 155 CINGDMEVRKSCRSRKNRFESVNQSLLFDQLVNSTAEAV-LQEMDNINIRRNRRSGEVER 213
Score = 49 (22.3 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 773 LLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 832
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 833 SIVYMPHI 840
Score = 44 (20.5 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 487 ENVKRELQETV-QYPVEHPEKFEKFGMSPSKGV 518
E+ +E ET+ ++P + PEK E S ++ V
Sbjct: 1315 EDQSKEKPETLNEHPGDDPEKLEALECSSNEKV 1347
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 563 (203.2 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 122/280 (43%), Positives = 172/280 (61%)
Query: 198 DENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
D +D+ V +D +GG+ + ++E+V PL +P++F+ ++PP+G L YGPPG+GKT
Sbjct: 394 DPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKT 453
Query: 257 LIARAVANETG-----AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
L+ARA+ANE FF G + +SK GESE LR F++A PSIIF DEID
Sbjct: 454 LVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEID 513
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
+AP R ++ IVS LL LMDGL +R ++VIGATNR +SIDPALRR GRFDRE
Sbjct: 514 GLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREF 573
Query: 372 DIGVPDEVGRLEVLRIHTK--NMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+PD+ R +L+IHT+ N KLSD L +A+ GY GAD+ ALCTEAAL +R
Sbjct: 574 LFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 632
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
+ I + ++ +S+ + + F A+ P++ R
Sbjct: 633 RYPQIYASSHKLQLDV-SSIVLNAQDFYHAMQNIVPASQR 671
Score = 277 (102.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 54/116 (46%), Positives = 76/116 (65%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V ++ IGGL + L+E V +P+ +PE FEKF + P +G LFYGPPG GKTL+A+A+A
Sbjct: 401 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 460
Query: 537 NECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
NEC F KG + L+ W GESE +R +FD+A P ++FFDE+D +A
Sbjct: 461 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLA 516
Score = 53 (23.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 272 CINGP-EIMSKLAGES---ES-NLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
CING E+ ES N F++ + + + E+D+I +R + GEVER
Sbjct: 158 CINGDMEVRKSCRSRKNRFESVNQSLLFDQLVNSTAEAV-LQEMDNINIRRNRRSGEVER 216
Score = 49 (22.3 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 518 VLFYGPPGCGKTL-LAKAIANECQANFIS-VKGPELLTMWFGESEANVREIFDKARQSAP 575
+L G G G+T LA A+ + + + + P L ++ E + +IF +AR++ P
Sbjct: 774 LLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYSVSAKTPEESCAQIFREARRTVP 833
Query: 576 CVLFFDEL 583
+++ +
Sbjct: 834 SIVYMPHI 841
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 579 (208.9 bits), Expect = 8.3e-55, P = 8.3e-55
Identities = 124/274 (45%), Positives = 172/274 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +D+VGG++ + Q++E+V LPL +P++F+ + PP+G+L +GPPG+GKTL+ARA+AN
Sbjct: 566 VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALAN 625
Query: 265 ETGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
+ F+ G + +SK GE+E LR FEEA K PSIIF DEID +AP R
Sbjct: 626 SVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLAPVRSS 685
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
++ IVS LL LMDG+ R VIVIGATNRP+SIDPALRR GRFDRE +P+
Sbjct: 686 KQEQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSIDPALRRPGRFDREFYFPLPNTE 745
Query: 380 GRLEVLRIHTKNMK--LSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
GR +L IHTK L + + + +A+ T GY GADL ALCTEAAL ++ + I
Sbjct: 746 GRRAILDIHTKGWDPPLPNSIK-DELAEITKGYGGADLRALCTEAALNAVQRRYPQIYKS 804
Query: 438 DETIDAEILNSMAVTDEHFKTALGTSNPSALRET 471
D+ + + ++ V + F A+ PS+ R T
Sbjct: 805 DKKLLIDP-RTIEVAPKDFMLAIKNITPSSERST 837
Score = 268 (99.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 50/115 (43%), Positives = 80/115 (69%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
VN++++GGL+ +L+E V P+ +PE F++F + P +GVLF+GPPG GKTLLA+A+AN
Sbjct: 566 VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALAN 625
Query: 538 ECQAN-----FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+ F KG + L+ W GE+E +R +F++AR++ P ++FFDE+D +A
Sbjct: 626 SVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLA 680
Score = 43 (20.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 285 ESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
E E+ LR++ + K++ DE P+ + TH E E
Sbjct: 304 EEENGLRRSSRKRPKSSQRKD--DEESDFEPEEDDTHDEDE 342
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 555 (200.4 bits), Expect = 9.4e-55, Sum P(2) = 9.4e-55
Identities = 120/358 (33%), Positives = 203/358 (56%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GP G GK + VA + G + ++ ++ + + + N+R E+A + P++
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 305 IFIDEIDSI-----APKREKTHGEVERRIVSQLLTLMDG----LKSRAHVIVIGATNRPN 355
+ + + + + ++EK + + +++ L + D + S + ++I T N
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVT--VN 787
Query: 356 SIDPALRRFGR-FDREIDIGVPDEVGRLEVLRIHTKNMKLS--DDVDLERIAKDTHGYVG 412
S+D + F EI + PDE R ++L+ TKN+ + + V ++ ++ T ++
Sbjct: 788 SMDELSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTASFLN 847
Query: 413 ADLAALCTEAALQCIREKMDVIDL-EDETIDAEILNS--MAVTDEHFKTALGTSNPSALR 469
++L AL +++ ++ + + + DE EI N + + D+ K+ +
Sbjct: 848 SNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSS 907
Query: 470 ETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKT 529
++PNV+W+D+GGL NVK E+ +T+Q P+EHP F G+ G+L +GPPG GKT
Sbjct: 908 IGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKT 966
Query: 530 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
LLAKAIA EC NF+SVKGPEL+ M+ GESE N+REIF+KARQ+ PCV+FFDELDS+A
Sbjct: 967 LLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLA 1024
Score = 497 (180.0 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 104/270 (38%), Positives = 161/270 (59%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V +DDVGG+ ++I + ++LPL HP LF S G+ GILL+GPPG+GKTL+A+
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKTLLAK 970
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK- 319
A+A E F + GPE+++ GESE N+R+ F +A + P +IF DE+DS+AP R
Sbjct: 971 AIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNG 1030
Query: 320 -THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
G V R+VSQLL +DG++ + V +IGATNRP+ +D +L R GR DR + +G+ E
Sbjct: 1031 ADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSE 1090
Query: 379 V-GRLEVLRIHTKNMKLSDDVDLERIAKDTH-GYVGADLAALCTEAALQCIREKMDVIDL 436
+ ++L+ T+ L+DDVDL ++ ++ GAD AL ++A E++ +
Sbjct: 1091 KENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITA-SI 1149
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPS 466
E + E + V HF A+ + PS
Sbjct: 1150 NGEINEEEQNQKLIVYQNHFIKAVNSLVPS 1179
Score = 49 (22.3 bits), Expect = 9.4e-55, Sum P(2) = 9.4e-55
Identities = 15/48 (31%), Positives = 26/48 (54%)
Query: 38 NDDNSV--VVLHPDTMEKLQFFRGDTILIKGKKRKDTVC---IALADD 80
N++N + V++ +KL F D + +K K+K TV + LA+D
Sbjct: 108 NNNNKLKSVLISNSCSKKLNLFNNDIVHLKPIKKKLTVLQRVVLLAND 155
Score = 39 (18.8 bits), Expect = 3.1e-50, Sum P(3) = 3.1e-50
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 83 EEPKIRMNKVVRSNLRVRLGDVVSV 107
E + ++ K + NL + +G+ VS+
Sbjct: 811 ENQRFKILKYLTKNLPIDIGNTVSI 835
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 556 (200.8 bits), Expect = 9.7e-55, Sum P(2) = 9.7e-55
Identities = 114/252 (45%), Positives = 167/252 (66%)
Query: 194 VRREDENRL---DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
+R+E N + +V +DD+GG+ + +R+ ++LPL+ P+LF S G+KP G+LLYGP
Sbjct: 638 IRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELF-SQGLKPRSGVLLYGP 696
Query: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
PG+GKTL+A+AVA E F I GPE+++ GESE+N+R FE+A ++P +IF DE+
Sbjct: 697 PGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDEL 756
Query: 311 DSIAPKREKTH--GEVERRIVSQLLTLMDGLK--SRAHVIVIGATNRPNSIDPALRRFGR 366
DSIAP R + G V R+VSQLL +D + + +V VIGATNRP+ +DP+L R GR
Sbjct: 757 DSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGR 816
Query: 367 FDREIDIGV-PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTH-GYVGADLAALCTEAAL 424
FD+ + +G+ E + +LR TK KL + +DL IAK+ H + GAD+ ALC++A L
Sbjct: 817 FDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVL 876
Query: 425 QCIREKMDVIDL 436
I+ K + IDL
Sbjct: 877 SAIKRKTNEIDL 888
Score = 516 (186.7 bits), Expect = 2.6e-50, Sum P(2) = 2.6e-50
Identities = 127/346 (36%), Positives = 193/346 (55%)
Query: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305
LL+G P +GKT VA+ A F I+ E A E+ L + K+ +II
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485
Query: 306 FIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS-RAHVIVIGATNRPNSIDPALRRF 364
F+ ++D ++ ++ + + + LL+ +D +KS + IVIG + I +
Sbjct: 486 FVKDLDVLSISSDEGNIVPGSKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKIPYEILSE 545
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL---CTE 421
F+ + DE RLE+L+I+ N+ + + L+ +A T+ +L L T+
Sbjct: 546 SFFELKFSELEMDE--RLELLKIYANNVIIDKRISLKDVALKTNSMSFGELECLPDHMTK 603
Query: 422 AALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWE 481
AA+ I+ ++++I IL+ +T++ ++ T+ VP VNW+
Sbjct: 604 AAVDRIKRT----GYDNDSI---ILSGPIITEQDVDVSINRIRKEK-SNTIFTVPKVNWD 655
Query: 482 DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA 541
DIGGLE K L++T+Q P++ PE F + G+ P GVL YGPPG GKTLLAKA+A E
Sbjct: 656 DIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSL 714
Query: 542 NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
F+S+KGPELL M+ GESEANVR +F+KAR S+PCV+FFDELDSIA
Sbjct: 715 EFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIA 760
Score = 41 (19.5 bits), Expect = 9.7e-55, Sum P(2) = 9.7e-55
Identities = 22/81 (27%), Positives = 34/81 (41%)
Query: 20 AILERKKAPNRLVVD-EAINDDNSVVVLHP------DTMEKLQFFRGDTILIKGKKRKDT 72
AI+ER K N ++++ + IN + V V P D+ K R D+ K+
Sbjct: 108 AIIERIKGRNAILMESDFINQNILVQVCQPVRHGVVDSETKFVIERKDSFTFLASNEKNI 167
Query: 73 VCIALAD-DTCEEPKIRMNKV 92
+T E IR +KV
Sbjct: 168 SSFKRGKTETDAELVIRPSKV 188
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 113/228 (49%), Positives = 157/228 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ IG+KPPKG++LYGPPG+GKTL+A+AVANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
A F + G E++ K G+ +R+ F+ AE++APSI+FIDEID++ KR E T G
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E++R ++ +LL +DG SR V VI ATNR +S+DPAL R GR DR+I + PD +
Sbjct: 312 EIQRTML-ELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ +IHT M +S DVDLE GAD+ A+CTEA L +RE+
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Score = 305 (112.4 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 56/118 (47%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P ++ DIGGLE+ +E++E V+ P+ HPE +E G+ P KGV+ YGPPG GKTLL
Sbjct: 184 VEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLL 243
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+ANE A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D++ T+
Sbjct: 244 AKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTK 301
Score = 41 (19.5 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 184 DTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+ E E ++ D+ ++ DD+ G + + EL++ H + S+G
Sbjct: 84 EEEYITNQEQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELIDE--NHGIIATSVG 136
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 113/228 (49%), Positives = 157/228 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ IG+KPPKG++LYGPPG+GKTL+A+AVANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
A F + G E++ K G+ +R+ F+ AE++APSI+FIDEID++ KR E T G
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E++R ++ +LL +DG SR V VI ATNR +S+DPAL R GR DR+I + PD +
Sbjct: 312 EIQRTML-ELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKR 370
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ +IHT M +S DVDLE GAD+ A+CTEA L +RE+
Sbjct: 371 RIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Score = 305 (112.4 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 56/118 (47%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P ++ DIGGLE+ +E++E V+ P+ HPE +E G+ P KGV+ YGPPG GKTLL
Sbjct: 184 VEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLL 243
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+ANE A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D++ T+
Sbjct: 244 AKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTK 301
Score = 41 (19.5 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 11/55 (20%), Positives = 24/55 (43%)
Query: 184 DTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+ E E ++ D+ ++ DD+ G + + EL++ H + S+G
Sbjct: 84 EEEYITNQEQIKSSDDKNYVKLKIDDLRGSPVSVGTLEELIDE--NHGIIATSVG 136
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 563 (203.2 bits), Expect = 4.2e-54, P = 4.2e-54
Identities = 117/276 (42%), Positives = 175/276 (63%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +G PP+G+LL+GPPG GKTL+
Sbjct: 250 ELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + E++S ++GESE LR+ FE+A NAP ++FIDEID+I PKRE
Sbjct: 309 AHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE 368
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRA---HVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 369 VASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 428
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
PDE R +L+ + ++L + +A T G+VGADL ALC EAA+ + + +
Sbjct: 429 PDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSRVLMTLQ 488
Query: 436 LEDETIDAEI--LNSMAVTDEHFKTALGTSNPSALR 469
E + D E+ L S ++ T + P L+
Sbjct: 489 -EQQPTDPEMGTLPSKGGQEDRVGTEPASETPDELQ 523
Score = 495 (179.3 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 100/242 (41%), Positives = 153/242 (63%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V + D+G + ++ + P+R P+ F+++G+ P G+LL GPPG G
Sbjct: 562 KREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCG 621
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A +AP +IF DE+D++
Sbjct: 622 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALC 681
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +G
Sbjct: 682 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 741
Query: 375 VPDEVGRLEVLRIHTKN---MKLSDDVDLERIAKDTHG--YVGADLAALCTEAALQCIRE 429
+P RL +L+ TKN L DV+LE +A D Y GADL+AL EA++ +R+
Sbjct: 742 LPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 801
Query: 430 KM 431
+M
Sbjct: 802 EM 803
Score = 410 (149.4 bits), Expect = 7.9e-36, P = 7.9e-36
Identities = 83/169 (49%), Positives = 108/169 (63%)
Query: 420 TEAALQCIREKMDVIDL--EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPN 477
TE A + E +++L + + E L + + F AL + PSA RE V VP+
Sbjct: 512 TEPASETPDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPS 571
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V W DIG LE+++ EL + PV PE+F G+ GVL GPPGCGKTLLAKA+AN
Sbjct: 572 VTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVAN 631
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E NFISVKGPELL M+ GESE VR++F +AR SAPCV+FFDE+D++
Sbjct: 632 ESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDAL 680
Score = 256 (95.2 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 50/114 (43%), Positives = 75/114 (65%)
Query: 473 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
++V V +ED+GG + +E+ + + + + HPE + G P +GVL +GPPGCGKTLLA
Sbjct: 251 LQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLA 309
Query: 533 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
AIA E + V E+++ GESE +RE+F++A +APCVLF DE+D+I
Sbjct: 310 HAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAI 363
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 154/473 (32%), Positives = 246/473 (52%)
Query: 122 LPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVV 181
+P E + GN D +L+ + E Y VRK L V G M+S + + Y V
Sbjct: 58 VPTFGCAEFLDGNA-DKFLR--WPELYFKVRKV-LGTVEG-MQSEGYLADTQNTSLYLVG 112
Query: 182 APDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP 241
+ ++ + E + L G DV ++E+ + LR P L
Sbjct: 113 STNSAVPSAPAYTSHEFWSSLSPAGLSDV---------VKEICDA-LR-PHLTSQAAALS 161
Query: 242 PKG-ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
G +LL GP GSGKT+ RAV + F ++ + + +E + AF +A++
Sbjct: 162 GAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAFAQAQQY 221
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVS--QLLTLMDGLKSRAHVIVIGATNRPNSID 358
P ++ + +I+ + R++ GE R I + QLL D +S V+VIG T +P +
Sbjct: 222 HPCVLLLKDIEVLGRDRDRL-GEDARVIATLRQLLLDRDPAQSSHPVLVIGTTCKPQDVP 280
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
++ F E+ I E R +L + T ++ L +V L ++A+ T G+V D AL
Sbjct: 281 TDVQT--AFLHEVKIEALSEDQRRAMLSMLTASLPLGKEVSLAKLARRTAGFVLGDFCAL 338
Query: 419 CTEAA-LQCIR-EKMDVIDLEDETIDAEILNS-MAVTDEHFKTALGTSNPSALRET-VVE 474
+ ++ C R + + +E ++ + + V +E F AL + + + +
Sbjct: 339 LSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNVALDQLHDAHSQAVGAPK 398
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
+P+V+W+D+GGL VK+E+ +T+Q P+EHPE G+ S G+L YGPPG GKTLLAKA
Sbjct: 399 IPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGLCRS-GLLLYGPPGTGKTLLAKA 456
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+A C F+SVKGPEL+ M+ G+SE NVR +F +AR +APC++FFDELDS+A
Sbjct: 457 VATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLA 509
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 112/277 (40%), Positives = 170/277 (61%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG+ + +I + ++LPL HP+L S+G+ G+LLYGPPG+GKTL+A+
Sbjct: 398 KIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELL-SLGLCR-SGLLLYGPPGTGKTLLAK 455
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA F + GPE+++ G+SE N+R F A AP IIF DE+DS+AP R ++
Sbjct: 456 AVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRS 515
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-PD 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +GV D
Sbjct: 516 GDSGGVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNED 575
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L+VL T+ KL V+L I ++ + GAD+ +LC++A + ++ K++ I+
Sbjct: 576 RESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIE- 634
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV 473
E +D E +++ +T E F A PS + ++
Sbjct: 635 --EGLDTES-SALILTMEDFLQAAARLQPSVSEQELL 668
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 183 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 302
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 362
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 363 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417
Score = 310 (114.2 bits), Expect = 9.5e-26, P = 9.5e-26
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 175 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 234
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 292
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 182 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 241
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 242 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 301
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 302 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 361
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 362 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 416
Score = 310 (114.2 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 174 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 233
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 234 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 291
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 535 (193.4 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 110/236 (46%), Positives = 156/236 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D GG++K + ++ V P+ +P+ FK IGVKPP GIL +GPPG GKT +A A+ANE
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
G F+ I+ E++S ++G SE N+R+ F +A + APSI+FIDEID+I KRE E+E+
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 327 RIVSQLLTLMDGL----------KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
RIV+QLLT MDG S V+VIGATNRP+++DPALRR GRF+ EI + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
DE R E+L + + ++L D +RIA+ T G+VGADL ++ A + I+ +D
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILD 467
Score = 518 (187.4 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 109/260 (41%), Positives = 158/260 (60%)
Query: 341 SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL 400
S V+VIGATNRP+++DPALRR GRF+ EI + PDE R E+L + + ++L D
Sbjct: 376 SAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK 435
Query: 401 ERIAKDTHGYVGADLAALCTEAALQCIREKMDVI------DLEDETI------DAEILNS 448
+RIA+ T G+VGADL ++ A + I+ +D D ED+ E L
Sbjct: 436 KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEK 495
Query: 449 MAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFE 508
+ V F+ A+ S RE VP+V W+D+GGL++++ + + P++ P+ ++
Sbjct: 496 LFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYK 555
Query: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 568
FG+ G L YGPPGCGKTL+AKA ANE ANF+ +KG ELL + GESE +R +F
Sbjct: 556 AFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQ 615
Query: 569 KARQSAPCVLFFDELDSIAT 588
+AR APCV+FFDE+D++ T
Sbjct: 616 RARTCAPCVIFFDEVDALTT 635
Score = 477 (173.0 bits), Expect = 4.7e-47, Sum P(2) = 4.7e-47
Identities = 106/277 (38%), Positives = 156/277 (56%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + + +V +DDVGG+ Q + P++ P ++K+ GV G LLYGPPG GK
Sbjct: 516 REGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGK 575
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TLIA+A ANE GA F I G E+++K GESE +R F+ A AP +IF DE+D++
Sbjct: 576 TLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTT 635
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
R K V R+++Q L +DG R +V VIGATNRP+ +DPA R GRF + + +
Sbjct: 636 SRGKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPL 694
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDT-HGYVGADLAALCTEAALQCIREKMDVI 434
P+ R +L+ + + VDL+ IAK+ G+ GADLA L +A Q + E +
Sbjct: 695 PNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSS 754
Query: 435 DL-EDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
+ ED+ D + + HF+ AL +PS ++
Sbjct: 755 ESSEDDVTD---ITQCTIKTRHFEQALSLVSPSVNKQ 788
Score = 287 (106.1 bits), Expect = 8.4e-22, Sum P(2) = 8.4e-22
Identities = 58/158 (36%), Positives = 95/158 (60%)
Query: 435 DLEDETIDAEILNSMAVTD--EHFKTALGTSNPSALRETVVE-VPNVNWEDIGGLENVKR 491
++E ET+ + + +A + K +L S + + VE ++D GG++ +
Sbjct: 184 NVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILD 243
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
EL+ V +P+ +PE F+K G+ P G+LF+GPPGCGKT LA AIANE F + E+
Sbjct: 244 ELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEV 303
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
++ G SE N+RE+F KA ++AP ++F DE+D+I ++
Sbjct: 304 ISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK 341
Score = 46 (21.3 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 75 IALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN 134
++ A+D ++ + R R +V L ++V Q +V+ KRV DD I G+
Sbjct: 32 LSTAEDIVDDLRSRYGNFARLTRQVLL---LNVRQVLNVRNNKRVKDEDEDDNIGDEEGS 88
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 111 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 170
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 171 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 230
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 231 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 290
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 291 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 345
Score = 310 (114.2 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 103 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 162
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 163 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 220
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 111/235 (47%), Positives = 159/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 56/118 (47%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 491 (177.9 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 106/242 (43%), Positives = 152/242 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + DV G ++ ++ E+VE L+ P+ F +G + PKG+LL GPPG+GKTL+A+A A
Sbjct: 158 VKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAG 216
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HG 322
E G FF I+G + + G S +R FE A+KNAP +IFIDEID++ +R G
Sbjct: 217 EAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGG 276
Query: 323 EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
ER + ++QLL MDG + +I+I ATNR + +DPAL R GRFDR+I + PD +GR
Sbjct: 277 HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGR 336
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE---KMDVIDLED 438
VL++H +N L + V+L+ IA T G+ GADL L EAAL R+ K+D D+++
Sbjct: 337 EAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDE 396
Query: 439 ET 440
T
Sbjct: 397 AT 398
Score = 257 (95.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 48/116 (41%), Positives = 74/116 (63%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E V ++D+ G + K+EL E V++ ++ P KF + G KGVL GPPG GKTLLAK
Sbjct: 154 EKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A A E F S+ G + + M+ G + VR++F+ A+++APC++F DE+D++ Q
Sbjct: 213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQ 268
Score = 48 (22.0 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 568
+FGMS G L +G G+ L + NE N+ E+ E + ++E ++
Sbjct: 513 EFGMSEKLGPLQFGQSQGGQVFLGRDFNNE--QNYSDQIAYEIDQ----EIQRIIKECYE 566
Query: 569 KARQ 572
+A+Q
Sbjct: 567 RAKQ 570
Score = 43 (20.2 bits), Expect = 1.8e-53, Sum P(3) = 1.8e-53
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 183 PDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIR 221
P TE ++ D+ ++D V V GV + Q++
Sbjct: 30 PKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLK 68
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 126/350 (36%), Positives = 201/350 (57%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPG GKT + A ++ G + + + +G E+ L+ F A + P++
Sbjct: 56 VLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAV 115
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+V+ L L+ D L S ++V+ T+R + +
Sbjct: 116 LLLTAVDLLGRDRDGL-GE-DARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDLPADV 173
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
+ F E+++ E RL +LR T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 174 QT--AFPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTH 231
Query: 422 AA-LQCIREK-MDVIDLEDETIDAEILNS-MAVTDEHFKTALGTSNPSALRET-VVEVPN 477
++ C R K + + E + E+ + + E F AL + + ++P+
Sbjct: 232 SSRAACTRIKNLGLAGGLTEEDEGELCAAGFPLLAEDFGQALELQQTAHSQAVGAPKIPS 291
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V+W D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 292 VSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVAT 349
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 350 ECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 399
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 110/282 (39%), Positives = 165/282 (58%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG+++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 288 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 345
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 346 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 405
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-PD 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 406 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 465
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A ++ + V DL
Sbjct: 466 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRR--VHDL 523
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E+ +++ +T E A PS + ++ +
Sbjct: 524 EEGLEPGS--SALMLTMEDLLQAAARLQPSVSEQELLRYKRI 563
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 110/235 (46%), Positives = 158/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++ PSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L+DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 304 (112.1 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 54/116 (46%), Positives = 80/116 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
+ P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAK
Sbjct: 178 KAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 237
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+AN+ A F+ V G EL+ + G+ VRE+F A + P ++F DE+D+I T+
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTK 293
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 553 (199.7 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 119/277 (42%), Positives = 168/277 (60%)
Query: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
+++G+ +GG+ K + ++E++ LPL +P++F ++PPKG+L YGPPG+GKTL+ARA+
Sbjct: 734 NKIGFSSIGGLDKHIQLLKEMLMLPLLYPEVFNKFKIQPPKGVLFYGPPGTGKTLLARAL 793
Query: 263 ANETGA-----FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
NE FF G + +SK GE+E LR FE+A+ PSIIF DEID +AP R
Sbjct: 794 VNECNVGGQKVSFFMRKGADCLSKWVGEAERQLRLLFEQAKAMQPSIIFFDEIDGLAPVR 853
Query: 318 EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
++ IVS LL LMDGL +R VIVIGATNR +SIDPALRR GRFDRE+ +P
Sbjct: 854 SSRQDQIHNSIVSTLLALMDGLDNRGQVIVIGATNRIDSIDPALRRPGRFDRELLFTLPS 913
Query: 378 EVGRLEVLRIHTKNM--KLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
+ R +L IHT+N K S + LE I+ GY GAD+ +LC+E+ L +R I
Sbjct: 914 KEARHRILTIHTENWLPKPSSQLLLE-ISDQLAGYCGADIKSLCSESVLCSLRTTYPQIY 972
Query: 436 LEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV 472
+ + N + V HF+ A+ PS+ R +
Sbjct: 973 KTSNKLQLSVDNIL-VEKSHFQDAMKLITPSSKRNLI 1008
Score = 273 (101.2 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 59/154 (38%), Positives = 94/154 (61%)
Query: 447 NSMAVTDEHFKTAL-GTSNP-----SALRETV-VEVPN-VNWEDIGGLENVKRELQETVQ 498
N+ ++D+ F G+S P S +++ + + N + + IGGL+ + L+E +
Sbjct: 697 NNDDLSDDEFGVGKRGSSGPLPINLSGNKDSEPLSIDNKIGFSSIGGLDKHIQLLKEMLM 756
Query: 499 YPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISVKGPELLT 553
P+ +PE F KF + P KGVLFYGPPG GKTLLA+A+ NEC + +F KG + L+
Sbjct: 757 LPLLYPEVFNKFKIQPPKGVLFYGPPGTGKTLLARALVNECNVGGQKVSFFMRKGADCLS 816
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
W GE+E +R +F++A+ P ++FFDE+D +A
Sbjct: 817 KWVGEAERQLRLLFEQAKAMQPSIIFFDEIDGLA 850
Score = 44 (20.5 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 184 DTEIFCEGEPVRREDENRLDEVGYDDV 210
+TE + E ++E+EN E G +DV
Sbjct: 347 ETEQDDDDEEEQQEEENAYSEYGEEDV 373
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 530 (191.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 113/253 (44%), Positives = 161/253 (63%)
Query: 198 DENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
DE + V + DV G+ + ++ E+VE L++P+ + +G + PKG+LL+G PG+GKTL
Sbjct: 150 DEKK--RVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTL 206
Query: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
+ARA+A E G FF I+G + + G S +R FE+A+KNAP I+FIDEID++ +R
Sbjct: 207 LARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR 266
Query: 318 EKT--HGEVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
G ER + ++QLL MDG S +I+I ATNRP+ +DPAL R GRFDR I +
Sbjct: 267 GAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVD 326
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
PD GR E+L++H K L DDVDL+ +A+ T G+ GADLA + EAAL R VI
Sbjct: 327 TPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVI 386
Query: 435 DLED--ETIDAEI 445
++E+ E I+ I
Sbjct: 387 NMEEMEEAIERVI 399
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 47/116 (40%), Positives = 77/116 (66%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E V + D+ G++ VK EL E V++ +++P K+ + G KGVL +G PG GKTLLA+
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AIA E F S+ G + + M+ G + VR++F++A+++APC++F DE+D++ Q
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Score = 38 (18.4 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
E++E ++ + PEK K K ++ Y G
Sbjct: 390 EMEEAIERVIAGPEKKSKVISEREKRLVAYHEAG 423
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 530 (191.6 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 113/253 (44%), Positives = 161/253 (63%)
Query: 198 DENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
DE + V + DV G+ + ++ E+VE L++P+ + +G + PKG+LL+G PG+GKTL
Sbjct: 150 DEKK--RVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTL 206
Query: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
+ARA+A E G FF I+G + + G S +R FE+A+KNAP I+FIDEID++ +R
Sbjct: 207 LARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR 266
Query: 318 EKT--HGEVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
G ER + ++QLL MDG S +I+I ATNRP+ +DPAL R GRFDR I +
Sbjct: 267 GAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVD 326
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
PD GR E+L++H K L DDVDL+ +A+ T G+ GADLA + EAAL R VI
Sbjct: 327 TPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVI 386
Query: 435 DLED--ETIDAEI 445
++E+ E I+ I
Sbjct: 387 NMEEMEEAIERVI 399
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 47/116 (40%), Positives = 77/116 (66%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E V + D+ G++ VK EL E V++ +++P K+ + G KGVL +G PG GKTLLA+
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLAR 209
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AIA E F S+ G + + M+ G + VR++F++A+++APC++F DE+D++ Q
Sbjct: 210 AIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Score = 38 (18.4 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
E++E ++ + PEK K K ++ Y G
Sbjct: 390 EMEEAIERVIAGPEKKSKVISEREKRLVAYHEAG 423
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 508 (183.9 bits), Expect = 3.6e-53, Sum P(2) = 3.6e-53
Identities = 104/247 (42%), Positives = 151/247 (61%)
Query: 193 PVRRE--DENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
P+ R DE + +V DDVG + + E V PL+HP F +GV+PP+G+LLYGP
Sbjct: 447 PLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGP 506
Query: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
PG GKT + RA+A+ + G E+M K G SE +R+ F A +APS++F+DE+
Sbjct: 507 PGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDEL 566
Query: 311 DSIAPKREKTHGE-VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDR 369
D++AP+R ++ V R+V+ LLT +DG+ V+++GATNRP+ IDPAL R GR +R
Sbjct: 567 DALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLER 626
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+ + PD R E+LR K++ LS DVDL+ +A GY AD AL EAAL +R
Sbjct: 627 LVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRR 686
Query: 430 KMDVIDL 436
+D ++
Sbjct: 687 SIDAANV 693
Score = 391 (142.7 bits), Expect = 5.6e-36, Sum P(2) = 5.6e-36
Identities = 94/260 (36%), Positives = 146/260 (56%)
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ S +L+ + + A V++I + RP+ +D LR DRE+ + +PD R +L
Sbjct: 323 VASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEA 382
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILN 447
N + D++L+ IA T G+V ADLAAL EAAL+ + ++L
Sbjct: 383 -LLNPVPTGDLNLDEIASRTPGFVVADLAALVREAALRAA-SRASADGRPPMLHQDDLLG 440
Query: 448 SMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKF 507
++ T + + SA E V V +V +D+G + K+ L E V +P++HP+ F
Sbjct: 441 AL--------TVIRPLSRSASDE--VTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTF 490
Query: 508 EKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF 567
+ G+ P +GVL YGPPGCGKT + +A+A+ Q + +VKG EL+ W G SE VRE+F
Sbjct: 491 ARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELF 550
Query: 568 DKARQSAPCVLFFDELDSIA 587
+AR SAP ++F DELD++A
Sbjct: 551 RRARDSAPSLVFLDELDALA 570
Score = 254 (94.5 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
Identities = 70/222 (31%), Positives = 119/222 (53%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
E+ +++ G + Q A++ E ++L L P L +++G G+L+ GP G GK + RAV
Sbjct: 209 EIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVC 268
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
+ G ++GPEI + AG+ + A + A ++ ++ I + D++ P +
Sbjct: 269 D--GRRLVTLDGPEIGALAAGDRVKAVASAVQ-AVRHEGGVLLITDADALLPAAAEP--- 322
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V I+S+L T + + A V++I + RP+ +D LR DRE+ + +PD R
Sbjct: 323 VASLILSELRTAV----ATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKS 378
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
+L N + D++L+ IA T G+V ADLAAL EAAL+
Sbjct: 379 LLEA-LLNPVPTGDLNLDEIASRTPGFVVADLAALVREAALR 419
Score = 116 (45.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 43/195 (22%), Positives = 77/195 (39%)
Query: 390 KNMKLSDDVDLERIAKDTHGYVGADLA--ALCTEAALQCIREKMDVIDLE-DETIDAEIL 446
K M + D V L + +D A AL + E + V ++ D + +
Sbjct: 125 KVMTVGDAVSL--LPRDLGPGTSTSAASRALAAAVGISWTSELLTVTGVDPDGPVSVQP- 181
Query: 447 NSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 506
NS+ A+GTS + + P + E++ G + +L E ++ ++ P
Sbjct: 182 NSLVTWGAGVPAAMGTSTAG---QVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHL 238
Query: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
+ G + GVL GP G GK L +A+ + +++ GPE+ + G+ V
Sbjct: 239 LQTLGAGTNLGVLVSGPAGVGKATLVRAVCDG--RRLVTLDGPEIGALAAGDRVKAVASA 296
Query: 567 FDKARQSAPCVLFFD 581
R +L D
Sbjct: 297 VQAVRHEGGVLLITD 311
Score = 61 (26.5 bits), Expect = 3.6e-53, Sum P(2) = 3.6e-53
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 36 AINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRS 95
A++ VV LHP+ + L D + + G + V A DT + ++ V S
Sbjct: 20 AVDSRRGVVRLHPNAIAALGIREWDAVSLTGSRTTAAVAGLAAADTAVGT-VLLDDVTLS 78
Query: 96 NLRVRLGDVVSVHQCADVKYGKR 118
N +R G V V YG R
Sbjct: 79 NAGLREGTEVIVSPVT--VYGAR 99
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 109/235 (46%), Positives = 158/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYGPPG+GKTL+A+AVAN+T
Sbjct: 183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID++ KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 302
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 362
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ IHT M L++DV+L + GAD+ A+CTEA L +RE+ + ED
Sbjct: 363 IFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417
Score = 301 (111.0 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 53/116 (45%), Positives = 80/116 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
+ P + DIGGL+ +E++E+V+ P+ HPE +E+ G+ P KGV+ YGPPG GKTLLAK
Sbjct: 177 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAK 236
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D++ T+
Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTK 292
Score = 39 (18.8 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 14/66 (21%), Positives = 29/66 (43%)
Query: 184 DTEIFCEGEPVRREDENRLDEVG-YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 242
+ E E ++ +DE +E DD+ G + + E+++ H + S+G +
Sbjct: 74 EDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDD--NHAIVSTSVGSEHY 131
Query: 243 KGILLY 248
IL +
Sbjct: 132 VSILSF 137
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 110/227 (48%), Positives = 152/227 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN T
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F A+ +PSI+FIDEID++ KR H GE
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR S+DPAL R GR DR+I+ +PD R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ +IHT M LS+DV+LE + GAD+ A+CTEA L +RE+
Sbjct: 367 IFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
Score = 281 (104.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/118 (44%), Positives = 77/118 (65%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P ++ DIGGLE +E++E V+ P+ HPE +E G+ P KGV+ YG PG GKTLL
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN A F+ V G EL+ + G+ VRE+F A +P ++F DE+D++ T+
Sbjct: 239 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Score = 44 (20.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 248
+E++ D DD+ G + + EL++ H + S+G + GIL +
Sbjct: 91 QEEKAEEDRSKVDDLRGTPMSVGNLEELIDE--NHAIVSSSVGPEYYVGILSF 141
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 555 (200.4 bits), Expect = 7.7e-53, P = 7.7e-53
Identities = 130/351 (37%), Positives = 203/351 (57%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPGSGKT A + G + + + + E+ L+ F A + P +
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+V+ L L+ D L ++V+ T+R + +
Sbjct: 526 LLLTALDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV 583
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
R F E+++ V E RL VL+ T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 584 RT--AFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTH 641
Query: 422 AA-LQCIREKMDVIDLEDETIDAEILNS-MAVTDEHFKTALG---TSNPSALRETVVEVP 476
A+ C R K + + +E + E+ + + E F AL T++ A+ ++P
Sbjct: 642 ASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAP--KIP 698
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V+W D+GGL++VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 699 SVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVA 756
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 757 TECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 807
Score = 484 (175.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 111/282 (39%), Positives = 167/282 (59%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 754 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 813
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP-D 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 814 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A + ++ + V DL
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRR--VRDL 931
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E E ++ +++ +T E A PS + ++ +
Sbjct: 932 E-EGLEPRS-SALLLTMEDLLQAAARLQPSVSEQELLRYKRI 971
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 555 (200.4 bits), Expect = 7.7e-53, P = 7.7e-53
Identities = 130/351 (37%), Positives = 203/351 (57%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPGSGKT A + G + + + + E+ L+ F A + P +
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+V+ L L+ D L ++V+ T+R + +
Sbjct: 526 LLLTALDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV 583
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
R F E+++ V E RL VL+ T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 584 RT--AFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTH 641
Query: 422 AA-LQCIREKMDVIDLEDETIDAEILNS-MAVTDEHFKTALG---TSNPSALRETVVEVP 476
A+ C R K + + +E + E+ + + E F AL T++ A+ ++P
Sbjct: 642 ASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAP--KIP 698
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V+W D+GGL++VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 699 SVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVA 756
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 757 TECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 807
Score = 484 (175.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 111/282 (39%), Positives = 167/282 (59%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 754 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 813
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP-D 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 814 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A + ++ + V DL
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRR--VRDL 931
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E E ++ +++ +T E A PS + ++ +
Sbjct: 932 E-EGLEPRS-SALLLTMEDLLQAAARLQPSVSEQELLRYKRI 971
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 523 (189.2 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 104/236 (44%), Positives = 163/236 (69%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LL+GPPG+GKTL+ARAVA+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R E + G
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDS 277
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG ++ ++ VI ATNR + +DPAL R GR DR+I+ PDE R
Sbjct: 278 EVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARA 336
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++L+IH++ M L +++ +IA+ G GA++ ++CTEA + +RE+ + ED
Sbjct: 337 DILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQED 392
Score = 317 (116.6 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 85/248 (34%), Positives = 140/248 (56%)
Query: 356 SIDPALRRFGRFDREIDIG---VPDE---VGRLEVLR--IHTKNMKLSDDVDLERIAKDT 407
S + LR++ F ++D V D+ V RL+ R ++TK L ++ L+++ +
Sbjct: 25 SDEKTLRKY--FSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEE--LQQL-HEQ 79
Query: 408 HGYVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTAL 460
YVG A+ + L + E V+D+ D++ID LN+ +A+ + + K
Sbjct: 80 GSYVGEVSKAMDKKKVLVKVHPEGKYVVDV-DKSIDINSLNTGARVALRADSYALHKLLP 138
Query: 461 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 520
+P V +VP+ +E +GGL+ +E++E ++ PV+HPE F+ G++ KGVL
Sbjct: 139 NKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLL 198
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 580
+GPPG GKTLLA+A+A+ + FI V G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 199 FGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFM 258
Query: 581 DELDSIAT 588
DE+DSI +
Sbjct: 259 DEIDSIGS 266
Score = 41 (19.5 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 39/166 (23%), Positives = 68/166 (40%)
Query: 6 ESSDAKGTKRDFSTAI--LERK---KAPNRLVVDEAINDDNSVVVLHPDTMEKLQ---FF 57
E SD K ++ FST + ++K K+ N + N+ N+ V + + +++L +
Sbjct: 23 EESDEKTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSY 82
Query: 58 RGDTILIKGKKRKDTVCIALADDTCEEPK-IRMNKVVRSNLRVRL-GDVVSVHQCADVKY 115
G+ KK+ + K I +N + + RV L D ++H+ K
Sbjct: 83 VGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSL-NTGARVALRADSYALHKLLPNKV 141
Query: 116 GKRVHILPV----DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLF 157
V ++ V D T E V G D +K PV+ +LF
Sbjct: 142 DPLVSLMMVEKVPDSTYEMVGG--LDKQIKEIKEVIELPVKHPELF 185
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 554 (200.1 bits), Expect = 9.5e-53, P = 9.5e-53
Identities = 132/355 (37%), Positives = 202/355 (56%)
Query: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA 301
P +LL GPPGSGKT A G + + + +G E+ L+ AF A +
Sbjct: 452 PGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCR 511
Query: 302 PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSID 358
P ++ + +D + R+ GE + R+V+ L L+ D L S ++V+ T+R +
Sbjct: 512 PVVLLLTAVDLLGRDRDGL-GE-DARVVATLRRLLLDEDPLTSHPPLMVVATTSRAQDLP 569
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
++ F E+++ V E RL +L+ T ++ L +V+L ++A+ G+V DL AL
Sbjct: 570 ADVQT--AFPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLARRCAGFVVGDLYAL 627
Query: 419 CTEAA-LQCIREKMD--VIDLEDETIDAEILNS-MAVTDEHFKTALGTSNPSALRETV-- 472
T ++ C R K L +E + E+ + + E AL SA + V
Sbjct: 628 LTHSSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDLGQALEQLQ-SAHSQAVGA 685
Query: 473 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
++P+V+W D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLA
Sbjct: 686 PKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLA 743
Query: 533 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KA+A EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 744 KAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 798
Score = 481 (174.4 bits), Expect = 7.5e-45, P = 7.5e-45
Identities = 105/242 (43%), Positives = 151/242 (62%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG+++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 687 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 744
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 745 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 804
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP-D 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 805 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 864
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ +L V L + + GADL +LC +A ++ + V DL
Sbjct: 865 RASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRR--VRDL 922
Query: 437 ED 438
ED
Sbjct: 923 ED 924
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 553 (199.7 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 131/351 (37%), Positives = 200/351 (56%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPGSGKT A + G + + + +G E+ L+ AF A + P +
Sbjct: 466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 525
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+V+ L L+ D L S ++V+ T+R + +
Sbjct: 526 LLLTAVDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLASCPPLMVVATTSRAQDLPADV 583
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
+ F E+++ V E RL VLR T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 584 QT--AFPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVGDLFALLTH 641
Query: 422 AA-LQCIREKMD--VIDLEDETIDAEILNS-MAVTDEHFKTALGTSNPSALRET-VVEVP 476
++ C R K L +E + E+ + + E F AL + + +P
Sbjct: 642 SSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAPRIP 700
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V+W D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVA 758
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 759 TECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 809
Score = 486 (176.1 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 111/282 (39%), Positives = 166/282 (58%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
R+ V + DVGG+++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 698 RIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRS 815
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-PD 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +GV D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNED 875
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ +L V L + + GADL +LC++A ++ + V DL
Sbjct: 876 RASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRR--VRDL 933
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E+ +++ +T E A PS + ++ +
Sbjct: 934 EEGLEPGS--SALLLTMEDLLQAAARLQPSVSEQELLRYKRI 973
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 110/235 (46%), Positives = 158/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y DVGG+ +Q+ +I+E VELPL HP+ ++ +G++PPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 187 YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQT 246
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F I G E++ K G+ +R+ F AE+NAPSI+FIDEID++ KR ++ GE
Sbjct: 247 SATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGER 306
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V V+ ATNR S+DPAL R GR DR+I+ +PDE +
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRR 366
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M L +V+LE GAD+ A+CTEA L +RE+ + +ED
Sbjct: 367 IFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMED 421
Score = 290 (107.1 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 50/116 (43%), Positives = 79/116 (68%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
+ P + D+GGL+ +E++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAK
Sbjct: 181 KAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAK 240
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+AN+ A F+ + G EL+ + G+ VRE+F A ++AP ++F DE+D++ T+
Sbjct: 241 AVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTK 296
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 528 (190.9 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 124/309 (40%), Positives = 180/309 (58%)
Query: 182 APDTEIF---CEGEPVRREDE--NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKS 236
AP +++ + + +R D NR + + ++ +GG+ + Q++E+V LPL +P++F
Sbjct: 342 APSSQLHFGHIDEKTIRSTDPFANR-ENLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLH 400
Query: 237 IGVKPPKGILLYGPPGSGKTLIARAVANETGA-----FFFCINGPEIMSKLAGESESNLR 291
+ + PP+G+L +GPPG+GKTL+AR +A FF G + +SK GE+E LR
Sbjct: 401 LHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLR 460
Query: 292 KAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGAT 351
FEEA + PSIIF DEID +AP R + IVS LL LMDGL +R V+VIGAT
Sbjct: 461 LLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALMDGLDTRGQVVVIGAT 520
Query: 352 NRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNM--KLSDDVDLERIAKDTHG 409
NRPN +DPALRR GRFDRE +P++ R+++L I++ + K+ + L +A+ T G
Sbjct: 521 NRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPKIPESY-LLHLAESTSG 579
Query: 410 YVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALR 469
Y GADL ALCTEAAL +R I + + LN ++V+ F A S R
Sbjct: 580 YGGADLKALCTEAALNAVRRTFPQIYTSSDKFLID-LNEISVSICDFVVASEKIAVSTRR 638
Query: 470 ETVVEVPNV 478
V PN+
Sbjct: 639 SDVK--PNI 645
Score = 258 (95.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 55/136 (40%), Positives = 85/136 (62%)
Query: 457 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
KT T +P A RE N+++ IGGLE++ +L+E V P+ +PE F ++P +
Sbjct: 355 KTIRST-DPFANRE------NLDFNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPR 407
Query: 517 GVLFYGPPGCGKTLLAKAIANECQA-----NFISVKGPELLTMWFGESEANVREIFDKAR 571
GVLF+GPPG GKTL+A+ +A C +F KG + L+ W GE+E +R +F++AR
Sbjct: 408 GVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKGSDCLSKWVGEAERQLRLLFEEAR 467
Query: 572 QSAPCVLFFDELDSIA 587
+ P ++FFDE+D +A
Sbjct: 468 RVQPSIIFFDEIDGLA 483
Score = 56 (24.8 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 525 GCGKTLLAKAIANECQANFI-SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
G G T L+K + + + S+ ELL + + +IF +AR++AP ++F + +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 584 D 584
+
Sbjct: 776 E 776
Score = 41 (19.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 15/84 (17%), Positives = 34/84 (40%)
Query: 159 VRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMA 218
+R RS+ F + + E D + + + ED + +V + D ++++
Sbjct: 1 MRRRARSIRFSSDDNEDNE-----EDDDYYSNAHSEKSEDHSNHIKVSHFDPSSYKQKLV 55
Query: 219 QIRELVELPLRHPQLFKSIGVKPP 242
+RE + + L K + + P
Sbjct: 56 SVRE-TQRNRKFSSLQKHLNTETP 78
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 108/243 (44%), Positives = 168/243 (69%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ + YD VGG+ KQ+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+AR
Sbjct: 138 KIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 197
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EK 319
AVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R E
Sbjct: 198 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGES 257
Query: 320 THG----EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
G EV+R ++ +LL +DG +S ++ V+ TNR + +DPAL R GR DR+I+
Sbjct: 258 GSGGGDSEVQRTML-ELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPN 316
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
P + GRL++L+IH++ M L+ ++L++I+ +G GA+L A+CTEA + +RE+ +
Sbjct: 317 PGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVS 376
Query: 436 LED 438
ED
Sbjct: 377 QED 379
Score = 308 (113.5 bits), Expect = 8.8e-27, P = 8.8e-27
Identities = 65/162 (40%), Positives = 99/162 (61%)
Query: 433 VIDLEDETID-AEILNSMAVTDEHFKTALGTSNPSALRETV----VE-VPNVNWEDIGGL 486
V+D+ D T+D A++ S +H L P+ + V VE +P+ ++ +GGL
Sbjct: 92 VVDI-DPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGL 150
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
+ +E++E ++ P++HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI V
Sbjct: 151 DKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRV 210
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 211 SGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGS 252
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 550 (198.7 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 130/353 (36%), Positives = 204/353 (57%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPGSGKT A + G + + + +G E L+ F A + P +
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRPVV 525
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+V+ L L+ D L S ++V+ T++ + +
Sbjct: 526 LLLTAVDLLGRNRDGL-GE-DARVVATLCHLLQDEDPLTSCPPLMVVATTSQAQDLPADV 583
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
+ F E+++ V E RL VL+ T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 584 QT--AFPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGFVVGDLYALLTH 641
Query: 422 AA-LQCIREKMDVI--DLEDETIDAEILNS-MAVTDEHFKTALG---TSNPSALRETVVE 474
++ + C R K + L +E + E+ + + E F AL T++ A+ +
Sbjct: 642 SSRVACTRIKNSGLAGGLSEED-EGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAP--K 698
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
+P+V+W D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKA 756
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+A EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 809
Score = 485 (175.8 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 106/242 (43%), Positives = 152/242 (62%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG+++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R +
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRN 815
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP-D 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +GV D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSED 875
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIA-KDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A ++ + V DL
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRR--VRDL 933
Query: 437 ED 438
E+
Sbjct: 934 EE 935
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 109/235 (46%), Positives = 158/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M ++DDV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 297 (109.6 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 54/118 (45%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL++ +E++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 427 (155.4 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 85/201 (42%), Positives = 127/201 (63%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG + I E + P ++ ++ ++ PKGILLYGPPG KTL A+A+A+E
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
F + GPEI SK GESE ++R F++A +N P +IF DEIDSIA R V
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN 953
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R++ QLL +DG+K+R +VI++ ATNRP+ IDPAL R GRFDR I + +P+ R +L+
Sbjct: 954 RVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Query: 387 IHTKNMKLSDDVDLERIAKDT 407
+ K K+ + ++ ++ K+T
Sbjct: 1014 KNLKFFKIHNLIEYDK--KET 1032
Score = 365 (133.5 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 66/134 (49%), Positives = 94/134 (70%)
Query: 454 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 513
+H AL PS ++E +++P ++DIGG + VKR + E + YP ++ ++K+ +
Sbjct: 808 KHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIE 867
Query: 514 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 573
KG+L YGPPGC KTL AKAIA+E NFISVKGPE+ + + GESE ++R IF KAR++
Sbjct: 868 SPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKAREN 927
Query: 574 APCVLFFDELDSIA 587
PCV+FFDE+DSIA
Sbjct: 928 HPCVIFFDEIDSIA 941
Score = 189 (71.6 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 298 EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSI 357
E+N +IIFIDEI+ + KRE+ + S LL MDG+K H I+IGATN N I
Sbjct: 552 EENKCTIIFIDEIEILCKKREENNNM--NIYTSVLLNNMDGIKKHTHTILIGATNYINKI 609
Query: 358 DPALRRFGRFDREIDIGVPDEVGRLEVLR 386
D ALRR GRFD+EI++ +P+ R+ + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISIFQ 638
Score = 110 (43.8 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 200 NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
N+ ++ G + +GG K I + +PL + ++ + + KGILL+GPPG GKT IA
Sbjct: 416 NKKEKKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIA 475
Query: 260 RAVANE 265
+ E
Sbjct: 476 LLIKEE 481
Score = 58 (25.5 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 403 IAKDTHGYVGADLAALCTEAALQCIREKM 431
+AK T Y GA++ +C EA++ +R+ +
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTL 1141
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 427 (155.4 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 85/201 (42%), Positives = 127/201 (63%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG + I E + P ++ ++ ++ PKGILLYGPPG KTL A+A+A+E
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
F + GPEI SK GESE ++R F++A +N P +IF DEIDSIA R V
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN 953
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R++ QLL +DG+K+R +VI++ ATNRP+ IDPAL R GRFDR I + +P+ R +L+
Sbjct: 954 RVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Query: 387 IHTKNMKLSDDVDLERIAKDT 407
+ K K+ + ++ ++ K+T
Sbjct: 1014 KNLKFFKIHNLIEYDK--KET 1032
Score = 365 (133.5 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 66/134 (49%), Positives = 94/134 (70%)
Query: 454 EHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMS 513
+H AL PS ++E +++P ++DIGG + VKR + E + YP ++ ++K+ +
Sbjct: 808 KHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIE 867
Query: 514 PSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQS 573
KG+L YGPPGC KTL AKAIA+E NFISVKGPE+ + + GESE ++R IF KAR++
Sbjct: 868 SPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKAREN 927
Query: 574 APCVLFFDELDSIA 587
PCV+FFDE+DSIA
Sbjct: 928 HPCVIFFDEIDSIA 941
Score = 189 (71.6 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 298 EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSI 357
E+N +IIFIDEI+ + KRE+ + S LL MDG+K H I+IGATN N I
Sbjct: 552 EENKCTIIFIDEIEILCKKREENNNM--NIYTSVLLNNMDGIKKHTHTILIGATNYINKI 609
Query: 358 DPALRRFGRFDREIDIGVPDEVGRLEVLR 386
D ALRR GRFD+EI++ +P+ R+ + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISIFQ 638
Score = 110 (43.8 bits), Expect = 3.1e-52, Sum P(3) = 3.1e-52
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 200 NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
N+ ++ G + +GG K I + +PL + ++ + + KGILL+GPPG GKT IA
Sbjct: 416 NKKEKKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIA 475
Query: 260 RAVANE 265
+ E
Sbjct: 476 LLIKEE 481
Score = 58 (25.5 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 403 IAKDTHGYVGADLAALCTEAALQCIREKM 431
+AK T Y GA++ +C EA++ +R+ +
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTL 1141
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 549 (198.3 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 128/352 (36%), Positives = 202/352 (57%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPG GKT + A + G + + ++ +G E+ L+ F A + P++
Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525
Query: 305 IFIDEIDSIAPKREKTHGEVER--RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALR 362
+ + +D + R+ GE R ++ LL D L S ++V+ T+R + ++
Sbjct: 526 LLLTAVDLLGRDRDGL-GEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADVQ 584
Query: 363 RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
F E+++ E RL +LR T ++ L +V+L ++A+ G+V DL AL T +
Sbjct: 585 T--AFPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHS 642
Query: 423 A-LQCIREKMDVI--DLEDETIDAEILNS-MAVTDEHFKTALG---TSNPSALRETVVEV 475
+ C R K + L +E + E+ + + E F AL T++ A+ ++
Sbjct: 643 SRAACTRIKNSGLAGGLTEED-EGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAP--KI 699
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P+V+W D+GGL+ VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+
Sbjct: 700 PSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAV 757
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
A EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 758 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 809
Score = 482 (174.7 bits), Expect = 6.0e-45, P = 6.0e-45
Identities = 110/282 (39%), Positives = 165/282 (58%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V + DVGG+++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 815
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-PD 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A ++ + V DL
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRR--VHDL 933
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E+ +++ +T E A PS + ++ +
Sbjct: 934 EEGLEPGS--SALMLTMEDLLQAAARLQPSVSEQELLRYKRI 973
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 107/246 (43%), Positives = 167/246 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
YD VGG+ KQ+ +I+E++ELP++HP+LF+S+G+ PKG++LYGPPG+GKTL+ARAVA+ T
Sbjct: 147 YDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHT 206
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG---- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + G
Sbjct: 207 DCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDS 266
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG ++ ++ +I ATNR + +DPAL R GR DR+I+ P R
Sbjct: 267 EVQRTML-ELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARA 325
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETI 441
E+LRIH++ M L+ ++L ++A+ +G GAD+ +CTEA + +RE+ + ED E
Sbjct: 326 EILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 385
Query: 442 DAEILN 447
+++N
Sbjct: 386 VGKVMN 391
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 76/221 (34%), Positives = 123/221 (55%)
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVID 435
+ V RLE R + N K+ D R+ ++ YVG + + + L ++ E ++D
Sbjct: 39 ENVRRLEAQR-NALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVD 97
Query: 436 LEDETIDAEILNSMAV---TDEHF--KTALGTSNPSALRETVVEVPNVNWEDIGGLENVK 490
+ + ++ S V +D + K ++P V +VP+ ++ +GGL
Sbjct: 98 VAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQI 157
Query: 491 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 550
+E++E ++ PV+HPE FE G++ KGV+ YGPPG GKTLLA+A+A+ FI V G E
Sbjct: 158 KEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAE 217
Query: 551 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI-ATQV 590
L+ + GE VRE+F AR+ AP ++F DE+DSI +T+V
Sbjct: 218 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRV 258
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 108/235 (45%), Positives = 158/235 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F AE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ +IHT M +++DV L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 IFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Score = 302 (111.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 55/118 (46%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P + DIGGL+N +E++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLL
Sbjct: 176 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLL 235
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D+I T+
Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 107/236 (45%), Positives = 157/236 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ ++RE VELPL HP+L++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 203 YADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 262
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
A F I G E++ K G+ +R+ F+ A ++APSI+FIDEID+I KR + T G
Sbjct: 263 SATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGGER 322
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E++R ++ +LL +DG R V VI ATN+ ++DPAL R GR DR+I PD+ +
Sbjct: 323 EIQRTML-ELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKK 381
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++ +HT M L DDVDL+ GAD+ A+CTEA L +RE+ + ++D
Sbjct: 382 KIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMDD 437
Score = 299 (110.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 62/155 (40%), Positives = 96/155 (61%)
Query: 441 IDAEILNSMAVTDEHFKTA--LGT----SNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
+D ++L A H KT +G S+P + + P ++ DIGGLE+ +E++
Sbjct: 158 VDKDLLEPGASILLHHKTVSVVGVLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVR 217
Query: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 554
E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 218 ESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQK 277
Query: 555 WFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ G+ VR+IF A + AP ++F DE+D+I T+
Sbjct: 278 YLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTK 312
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 108/227 (47%), Positives = 152/227 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN T
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F + G E++ K G+ +R+ F A+ +PSI+FIDEID++ KR + GE
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG SR V VI ATNR S+DPAL R GR DR+I+ +PD R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ +IHT M L++DV+LE + GAD+ A+CTEA L +RE+
Sbjct: 367 IFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
Score = 281 (104.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/118 (44%), Positives = 77/118 (65%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V + P ++ DIGGLE +E++E V+ P+ HPE +E G+ P KGV+ YG PG GKTLL
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+AN A F+ V G EL+ + G+ VRE+F A +P ++F DE+D++ T+
Sbjct: 239 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Score = 44 (20.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLY 248
+E++ D DD+ G + + EL++ H + S+G + GIL +
Sbjct: 91 QEEKAEEDRSKVDDLRGTPMSVGNLEELIDE--NHAIVSSSVGPEYYVGILSF 141
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 111/236 (47%), Positives = 156/236 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 185 YADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 244
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
A F I G E++ K G+ R+ F+ A +APSI+FIDEID+I KR E T G
Sbjct: 245 SATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGER 304
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E++R ++ +LL +DG R + VI ATN+ S+DPAL R GR DR+I PD +
Sbjct: 305 EIQRTML-ELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKK 363
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++L IHT M L+DDV+L+ I GAD+ A+CTEA L +RE+ + ED
Sbjct: 364 KILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAED 419
Score = 289 (106.8 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 52/114 (45%), Positives = 78/114 (68%)
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P ++ DIGGLE+ +E++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+
Sbjct: 181 PTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 240
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AN+ A F+ + G EL+ + G+ R+IF A AP ++F DE+D+I T+
Sbjct: 241 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTK 294
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 545 (196.9 bits), Expect = 8.0e-52, P = 8.0e-52
Identities = 118/298 (39%), Positives = 178/298 (59%)
Query: 176 PEYCVVAPD-TEIFCEGEP-VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQL 233
P +C+ D + +P +RE + + +DD+G + K +++ V P+++P++
Sbjct: 628 PNFCLTLIDFVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEM 687
Query: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293
+ +G+ P G+LL GPPG GKTL+A+A+ANE G F + GPE+M+ GESE +R
Sbjct: 688 LERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRAC 747
Query: 294 FEEAEKNAPSIIFIDEIDSIAPKR-EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGAT 351
F+ A +AP +IF DE DS+ PKR + G RIV+QLLT MDG++ R V ++ AT
Sbjct: 748 FQRARNSAPCVIFFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAAT 807
Query: 352 NRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK---LSDDVDLERIAKDTH 408
NRP+ IDPA+ R GR D + +G P++ R E+L+ TKN K L+DDVDL+ IA T
Sbjct: 808 NRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTE 867
Query: 409 GYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
GY GADLA L +A++ +R+ ++ D L+ + V +HF+ AL PS
Sbjct: 868 GYTGADLAGLVKQASMFSLRQSLNNGDTN--------LDDLCVRSQHFQEALQQLRPS 917
Score = 451 (163.8 bits), Expect = 1.2e-41, P = 1.2e-41
Identities = 102/316 (32%), Positives = 176/316 (55%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+R+ E + + D+GG+ + ++ E++ + ++ P+ + +G+ P +G+LL+GPPG G
Sbjct: 238 KRDLEVQHPTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCG 296
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KT +ARA++ + I E++ ++GESE +R+ F++A +P ++FIDEID+I
Sbjct: 297 KTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIG 356
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAH---VIVIGATNRPNSIDPALRRFGRFDREI 371
R+ ++ERRIVSQL++ +D LK+ V+VI AT RP+ +DP LRR GRFD EI
Sbjct: 357 GNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEI 416
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
I +P R E+LRI + + + ++ ++IA+ T GYVGADL AL + AA ++ +
Sbjct: 417 AIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRS 476
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALG-TSNPSALRETVVEVPNVNWEDIGGLENVK 490
E + + ++ + D+ G T P + E + + G E
Sbjct: 477 MKKFRELHAASEKNMTTVTLDDDEPSEDAGETPVPDSKGEETAKDAEAEQKVDGDKETSA 536
Query: 491 RELQETVQYPVEHPEK 506
++ E +E P+K
Sbjct: 537 KDKSEGDSPNIETPKK 552
Score = 394 (143.8 bits), Expect = 8.8e-34, P = 8.8e-34
Identities = 75/131 (57%), Positives = 92/131 (70%)
Query: 456 FKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPS 515
F A+ PSA RE + VP+ W+DIG LE ++ EL+ V PV++PE E+ G++
Sbjct: 637 FVDAIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAP 696
Query: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 575
GVL GPPGCGKTLLAKAIANE NFISVKGPEL+ M+ GESE VR F +AR SAP
Sbjct: 697 SGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAP 756
Query: 576 CVLFFDELDSI 586
CV+FFDE DS+
Sbjct: 757 CVIFFDEFDSL 767
Score = 259 (96.2 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 49/118 (41%), Positives = 80/118 (67%)
Query: 469 RETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGK 528
R+ V+ P ++ DIGG+++ +EL E + + ++ PE + + G+ PS+G+L +GPPGCGK
Sbjct: 239 RDLEVQHPTESFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGK 297
Query: 529 TLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
T LA+AI+ + + + + EL+ GESE +RE+FD+A +PCVLF DE+D+I
Sbjct: 298 TFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAI 355
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 111/235 (47%), Positives = 156/235 (66%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 181 YSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 240
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--GEV 324
A F I G E++ K G+ R+ F+ A +NAPSI+FIDEID+I KR ++ GE
Sbjct: 241 SATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGER 300
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG R V VI ATN+ ++DPAL R GR DR+I PD + +
Sbjct: 301 EIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKK 360
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+L IHT M LS+DV+LE + GAD+ A+CTEA L +RE+ + ED
Sbjct: 361 ILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAED 415
Score = 293 (108.2 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 52/114 (45%), Positives = 80/114 (70%)
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P ++ DIGGLE+ +E++E+V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAKA+
Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AN+ A F+ + G EL+ + G+ R+IF A ++AP ++F DE+D+I T+
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTK 290
Score = 38 (18.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 349 GATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTK-NMKLSDDVDLERIAKD 406
G+ +P P +FGR R+ G P +L + T+ +KL + +ERI KD
Sbjct: 16 GSNQKPKYEPPVQSKFGRKKRK---GGPATAEKLPNIYPSTRCKLKL---LRMERI-KD 67
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 108/252 (42%), Positives = 169/252 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
YD VGG+ KQ+ +I+E++ELP++HP+LF+S+G+ PKG++LYGPPG+GKTL+ARAVA+ T
Sbjct: 143 YDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHT 202
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R E + G
Sbjct: 203 ECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDS 262
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG +S + +I ATNR + +DPAL R GR DR+I+ P R
Sbjct: 263 EVQRTML-ELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAART 321
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
++L+IH+++M L+ ++L +IA+ +G GAD+ +CTEA + +RE+ I + E +
Sbjct: 322 DILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERR--IHVTQEDFE 379
Query: 443 AEILNSMAVTDE 454
+ M+ D+
Sbjct: 380 LAVAKVMSKNDD 391
Score = 319 (117.4 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 80/230 (34%), Positives = 126/230 (54%)
Query: 368 DREIDIG-VPDEVGRLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAAL 424
D EI I + RLE R ++ K +L D++ ++ ++ YVG + + + L
Sbjct: 25 DTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDEL---KLLQEPGSYVGEVVKVMGLKKVL 81
Query: 425 QCIREKMDVIDLEDETIDAEILN-SMAVT---DEH--FKTALGTSNPSALRETVVEVPNV 478
I + I + ID + L S+ V D H +K +P V +VP+
Sbjct: 82 VKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVPDS 141
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
++ +GGL+ +E++E ++ PV+HPE FE G++ KGV+ YGPPG GKTLLA+A+A+
Sbjct: 142 TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 201
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 202 TECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 251
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 546 (197.3 bits), Expect = 1.0e-51, P = 1.0e-51
Identities = 129/362 (35%), Positives = 204/362 (56%)
Query: 231 PQLFKS-IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESN 289
P L +S + +K ILL GP GSGK RAV+ ++ + + A SE+
Sbjct: 547 PHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAK 606
Query: 290 LRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIG 349
++ FE AE + P ++ + + + R+ E + R+ + L L+ + + V+V+G
Sbjct: 607 IKSVFERAELHHPCLLLLRNLQLLGQSRDGA--ETDCRVAATLCQLIAAVHTS--VVVVG 662
Query: 350 ATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHG 409
+ + + + + F ++ I E R VL ++++ L DV+L RIAK T G
Sbjct: 663 SVSSQHELPSDV--MAAFVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAG 720
Query: 410 YVGADLAALCTEAALQCIREKMDVIDLE--DETIDAEI-LNSMAVTDEHFKTALGTSNPS 466
+V DL AL T A R ++ E E + ++ ++ ++VT E F AL +
Sbjct: 721 FVLGDLCALLTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEA 780
Query: 467 ALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
+ ++P V+W+D+GGL+ VK+E+ +T+Q P+EHPE G+ S G+L YGPPG
Sbjct: 781 HSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLS-LGLRRS-GLLLYGPPG 838
Query: 526 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585
GKTLLAKA+A EC F+SVKGPEL+ M+ G+SE N+R++ KAR +APC++FFDELDS
Sbjct: 839 TGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDS 898
Query: 586 IA 587
+A
Sbjct: 899 LA 900
Score = 496 (179.7 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 119/315 (37%), Positives = 184/315 (58%)
Query: 170 VIETDPPEYCV--VAPDTEIFCEGEPVRREDEN------RLDEVGYDDVGGVRKQMAQIR 221
V E + + CV V+ +E F V +E + ++ V + DVGG+++ +I
Sbjct: 750 VSEQEEEDLCVSGVSVTSEDFSAALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKEIL 809
Query: 222 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 281
+ ++LPL HP+L S+G++ G+LLYGPPG+GKTL+A+AVA E F + GPE+++
Sbjct: 810 DTIQLPLEHPELL-SLGLRR-SGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINM 867
Query: 282 LAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVERRIVSQLLTLMDGL 339
G+SE N+R+ +A AP IIF DE+DS+AP R + G V R+VSQLL +DGL
Sbjct: 868 YVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGL 927
Query: 340 KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-PDEVGRLEVLRIHTKNMKLSDDV 398
S V VIGATNRP+ +D +L R GRFD+ + +G+ D +L+VL+ + K+ V
Sbjct: 928 HSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASV 987
Query: 399 DLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFK 457
L I + + GADL +LC++A + ++ K+ I E +D+E L+S+ + E F
Sbjct: 988 CLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRIT---EGVDSE-LSSLTLCSEDFS 1043
Query: 458 TALGTSNPSALRETV 472
AL PS + +
Sbjct: 1044 EALSGLQPSVSEQQI 1058
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 105/238 (44%), Positives = 162/238 (68%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ + +GG+ Q+ ++RE++ELPL++P+LF+ +G+KPPKG+LLYGPPG+GKTL+ARAVA
Sbjct: 133 QINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVA 192
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
+ F + I+ K GES +R+ F A+++ P IIF+DEID+I +R E T
Sbjct: 193 SSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTS 252
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL +DG +I ATNRP+++DPAL R GR DR+I+I +P+EVG
Sbjct: 253 ADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVG 312
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RLE+L+IH+ +++ D+D E + K + G GADL + TEA L I++ D I+ +D
Sbjct: 313 RLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDD 370
Score = 286 (105.7 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 51/115 (44%), Positives = 80/115 (69%)
Query: 473 VEVPN-VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
+E P +N+ IGGL + REL+E ++ P+++PE F++ G+ P KGVL YGPPG GKTLL
Sbjct: 128 LEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLL 187
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A+A+A+ + NF+ V ++ + GES +RE+F A++ PC++F DE+D+I
Sbjct: 188 ARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAI 242
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 516 (186.7 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 107/243 (44%), Positives = 158/243 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DDV G+ + +++E+V L+ P+ F ++G K PKG+LL GPPG+GKTL+A+A+A
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HG 322
E G FF I+G E + G S +R F++A++NAP +IFIDEID++ +R G
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287
Query: 323 EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
ER + ++QLLT MDG + +I+I ATNRP+ +D AL R GRFDR++ + PD GR
Sbjct: 288 NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGR 347
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL-E-DE 439
E+L +H +N KL+ +V ++ IA+ T G+ GADLA L EAA+ R + I L E D+
Sbjct: 348 KEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDD 407
Query: 440 TID 442
+D
Sbjct: 408 AVD 410
Score = 274 (101.5 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 51/112 (45%), Positives = 74/112 (66%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++D+ G++ K ELQE V + ++ PE+F G KGVL GPPG GKTLLAKAIA
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Q
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQ 279
Score = 37 (18.1 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 164 RSVEFKV-IETDPPEYCVVAPDTEIFCEGEPVR 195
R++ +V + T+ PE D+ I + PVR
Sbjct: 80 RTLRSRVDLPTNAPELIARLRDSNIRLDSHPVR 112
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 105/238 (44%), Positives = 161/238 (67%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
E+ +D +GG+ +Q+ ++RE++ELPL++P++F+ +G+KPPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 177 EITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
GA F I+ K GES +R+ F A+++ P IIF+DE+D+I +R E T
Sbjct: 237 ATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 296
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LLT MDG + +I ATNRP+++DPAL R GR DR+++I +P+E G
Sbjct: 297 ADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAG 356
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RLE+ +IHT +K + + D E K + G+ GAD+ TEA IR+ D I+ +D
Sbjct: 357 RLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414
Score = 277 (102.6 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 53/124 (42%), Positives = 79/124 (63%)
Query: 463 SNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG 522
++P T E + ++ IGGL REL+E ++ P+++PE F++ G+ P KGVL YG
Sbjct: 163 TDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYG 222
Query: 523 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE 582
PPG GKTLLAKA+A ANFI ++ + GES +RE+F A++ PC++F DE
Sbjct: 223 PPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE 282
Query: 583 LDSI 586
+D+I
Sbjct: 283 VDAI 286
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 104/227 (45%), Positives = 154/227 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +++E +ELPL HP+L++ IG+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 183 YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQT 242
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEV 324
A F + G E++ K G+ +R+ F A++ APSI+FIDEID++ KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGER 302
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG +R V VI ATNR ++DPAL R GR DR+I+ +PD + +
Sbjct: 303 EIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRK 362
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
+ IHT M LS+DV+LE GAD+ A+CTE+ L +RE+
Sbjct: 363 IFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRER 409
Score = 296 (109.3 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 55/129 (42%), Positives = 83/129 (64%)
Query: 461 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 520
G +P V + P ++ DIGGLE +E++E ++ P+ HPE +E+ G+ P KGV+
Sbjct: 164 GEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVIL 223
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 580
YG PG GKTLLAKA+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F
Sbjct: 224 YGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFI 283
Query: 581 DELDSIATQ 589
DE+D++ T+
Sbjct: 284 DEIDAVGTK 292
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 111/238 (46%), Positives = 160/238 (67%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ Y DVGG+ +Q+ ++RE+VELPL +P+LFK +G+ PPKG LL+GPPG+GKTL+ARAVA+
Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVAS 206
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P I+F+DEID+I +R E T
Sbjct: 207 QLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSA 266
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL +DG S V VI ATNRP+++DPAL R GR DR+I+IG+P+E R
Sbjct: 267 DREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSR 326
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLED 438
LE+L+IH+ + ++D E + K + G+ ADL +CTEA + IR E+ VID ED
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVID-ED 383
Score = 283 (104.7 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 49/110 (44%), Positives = 77/110 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+++ D+GGL REL+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 111/238 (46%), Positives = 160/238 (67%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ Y DVGG+ +Q+ ++RE+VELPL +P+LFK +G+ PPKG LL+GPPG+GKTL+ARAVA+
Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVAS 206
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P I+F+DEID+I +R E T
Sbjct: 207 QLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSA 266
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL +DG S V VI ATNRP+++DPAL R GR DR+I+IG+P+E R
Sbjct: 267 DREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSR 326
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLED 438
LE+L+IH+ + ++D E + K + G+ ADL +CTEA + IR E+ VID ED
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVID-ED 383
Score = 283 (104.7 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 49/110 (44%), Positives = 77/110 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+++ D+GGL REL+E V+ P+ +PE F++ G++P KG L +GPPG GKTLLA+A+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAI 255
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 106/243 (43%), Positives = 162/243 (66%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
E+ ++ +GG+ +Q+ ++RE++ELPL++P+LF +G+KPPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
GA F I+ K GES +R+ F A+++ P IIF+DE+D+I +R E T
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL MDG + +I ATNRP+++DPAL R GR DR+I+IG+P+E G
Sbjct: 288 ADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440
RLE+ +IHT + + D E K + G+ GAD+ + TEA IR+ D I L+++
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYI-LQNDL 406
Query: 441 IDA 443
+ A
Sbjct: 407 MKA 409
Score = 276 (102.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 53/123 (43%), Positives = 77/123 (62%)
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+P T E +++ IGGL REL+E ++ P+++PE F + G+ P KGVL YGP
Sbjct: 155 DPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGP 214
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PG GKTLLAKA+A ANFI ++ + GES +RE+F A++ PC++F DE+
Sbjct: 215 PGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEV 274
Query: 584 DSI 586
D+I
Sbjct: 275 DAI 277
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 541 (195.5 bits), Expect = 2.6e-51, P = 2.6e-51
Identities = 127/352 (36%), Positives = 197/352 (55%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL GPPGSGKT A + G + + + + E+ L+ F A + P++
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526
Query: 305 IFIDEIDSIAPKREKTHGEVERRIVSQLLTLM---DGLKSRAHVIVIGATNRPNSIDPAL 361
+ + +D + R+ GE + R+ + L L+ D L ++V+ T+R + +
Sbjct: 527 LLLTAVDLLGRDRDGL-GE-DARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDV 584
Query: 362 RRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTE 421
+ F E+++ V E RL +L+ T ++ L +V+L ++A+ G+V DL AL T
Sbjct: 585 QT--AFPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTH 642
Query: 422 ---AALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALG---TSNPSALRETVVEV 475
AA IR L +E + + E F AL T++ A+ +
Sbjct: 643 TCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGAP--RI 700
Query: 476 PNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAI 535
P+V+W D+GGL++VK+E+ ET+Q P+EHPE G+ S G+L +GPPG GKTLLAKA+
Sbjct: 701 PSVSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAV 758
Query: 536 ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
A EC F+SVKGPEL+ M+ G+SE NVRE+F +AR +APC++FFDELDS+A
Sbjct: 759 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLA 810
Score = 488 (176.8 bits), Expect = 1.4e-45, P = 1.4e-45
Identities = 113/283 (39%), Positives = 167/283 (59%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
R+ V + DVGG++ +I E ++LPL HP+L S+G++ G+LL+GPPG+GKTL+A+
Sbjct: 699 RIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 756
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ G+SE N+R+ F A AP IIF DE+DS+AP R ++
Sbjct: 757 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 816
Query: 321 --HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP-D 377
G V R+VSQLL +DGL S V VIGATNRP+ +DPAL R GRFD+ + +G D
Sbjct: 817 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876
Query: 378 EVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIREKMDVIDL 436
+L VL T+ KL V L + + GADL +LC++A + ++ + V DL
Sbjct: 877 RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRR--VRDL 934
Query: 437 EDETIDAEILNS-MAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E+ E+ +S + +T E A PS + ++ +
Sbjct: 935 EE---GLELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRI 974
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 106/247 (42%), Positives = 168/247 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ +Q+ +++E++ELP++HP++F+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHGEVE 325
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI +R E HG+ E
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE 297
Query: 326 -RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
+R + +LL +DG +S ++ VI TNR + +D AL R GR DR+I+ P+ R+E+
Sbjct: 298 VQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEI 357
Query: 385 LRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETIDA 443
L+IH++ M L +D+ +IA D + GA++ A+CTEA + +RE+ + ED E A
Sbjct: 358 LKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVA 417
Query: 444 EILNSMA 450
+++ A
Sbjct: 418 KVMKQDA 424
Score = 311 (114.5 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V +VP+ +E +GGL+ +E++E ++ PV+HPE FE G+S KGVL YGPPG GKTLL
Sbjct: 170 VEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLL 229
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +Q
Sbjct: 230 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 106/247 (42%), Positives = 168/247 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ +Q+ +++E++ELP++HP++F+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHGEVE 325
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI +R E HG+ E
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSE 297
Query: 326 -RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
+R + +LL +DG +S ++ VI TNR + +D AL R GR DR+I+ P+ R+E+
Sbjct: 298 VQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEI 357
Query: 385 LRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETIDA 443
L+IH++ M L +D+ +IA D + GA++ A+CTEA + +RE+ + ED E A
Sbjct: 358 LKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVA 417
Query: 444 EILNSMA 450
+++ A
Sbjct: 418 KVMKQDA 424
Score = 311 (114.5 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 58/118 (49%), Positives = 81/118 (68%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V +VP+ +E +GGL+ +E++E ++ PV+HPE FE G+S KGVL YGPPG GKTLL
Sbjct: 170 VEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLL 229
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +Q
Sbjct: 230 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQ 287
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 506 (183.2 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 111/249 (44%), Positives = 158/249 (63%)
Query: 198 DENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
DE + +V + DV G ++ ++ E+VE L+ P+ F +G + PKG+LL GPPG+GKTL
Sbjct: 154 DEKK--KVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTL 210
Query: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
+ARAVA E G FF I+G + + G S +R FE A+KNAP IIFIDEID++ +R
Sbjct: 211 LARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQR 270
Query: 318 EKT--HGEVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
G ER + ++QLL MDG + +I+I ATNRP+ +DPAL R GRFDR+I +
Sbjct: 271 GAGLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVD 330
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE---KM 431
PD GR VL++H +N L ++++L IA T G+ GADL L EAAL R+ K+
Sbjct: 331 RPDVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKI 390
Query: 432 DVIDLEDET 440
D+ D+++ T
Sbjct: 391 DMSDIDEAT 399
Score = 258 (95.9 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 47/116 (40%), Positives = 74/116 (63%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E V + D+ G + K+EL E V++ ++ P KF + G KGVL GPPG GKTLLA+
Sbjct: 155 EKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A E F S+ G + + M+ G + VR++F+ A+++APC++F DE+D++ Q
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQ 269
Score = 42 (19.8 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 568
+FGMS G + +G G+ L + +E N+ E+ M E + ++E +
Sbjct: 514 EFGMSDKLGPMQFGSSQGGQVFLGRDFHSE--QNYSDAIAHEI-DM---EMQTIMKECYA 567
Query: 569 KARQ 572
+A+Q
Sbjct: 568 RAKQ 571
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 106/245 (43%), Positives = 169/245 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---HGE 323
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R ++ +G+
Sbjct: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
Query: 324 VE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+ P+E R
Sbjct: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRF 339
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETI 441
++L+IH++ M L +DL++IA+ +G GA+L A+CTEA + +RE+ + ED E
Sbjct: 340 DILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
Query: 442 DAEIL 446
A+++
Sbjct: 400 VAKVM 404
Score = 314 (115.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 79/221 (35%), Positives = 124/221 (56%)
Query: 377 DEVGRLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDV 433
+ + RLE R ++++ L +++ L ++ YVG + + L + E V
Sbjct: 52 NNLNRLEAQRNELNSRVRMLREELQL---LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYV 108
Query: 434 IDLEDETID-AEILNSMAVTDEHFKTALGTSNPSALRETV----VE-VPNVNWEDIGGLE 487
+D+ D++ID +I S V + L PS + V VE VP+ ++ IGGL+
Sbjct: 109 VDI-DKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLD 167
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+E++E ++ P++HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI V
Sbjct: 168 QQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 228 GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 106/245 (43%), Positives = 169/245 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT---HGE 323
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R ++ +G+
Sbjct: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
Query: 324 VE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+ P+E R
Sbjct: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRF 339
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETI 441
++L+IH++ M L +DL++IA+ +G GA+L A+CTEA + +RE+ + ED E
Sbjct: 340 DILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMA 399
Query: 442 DAEIL 446
A+++
Sbjct: 400 VAKVM 404
Score = 311 (114.5 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 78/219 (35%), Positives = 123/219 (56%)
Query: 379 VGRLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVID 435
+ RLE R ++++ L +++ L ++ YVG + + L + E V+D
Sbjct: 54 LNRLEAQRNELNSRVRMLREELQL---LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVD 110
Query: 436 LEDETID-AEILNSMAVTDEHFKTALGTSNPSALRETV----VE-VPNVNWEDIGGLENV 489
+ D++ID ++ S V + L PS + V VE VP+ ++ IGGL+
Sbjct: 111 I-DKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQ 169
Query: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 549
+E++E ++ P++HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI V G
Sbjct: 170 IKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229
Query: 550 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 230 ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 108/246 (43%), Positives = 167/246 (67%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
YD +GG+ +Q+ +I+E++EL L+HP+LF+S+G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 131 YDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 190
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG---- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + G
Sbjct: 191 DCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDS 250
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG + ++ +I ATNR + +DPAL R GR DR+I+ P R
Sbjct: 251 EVQRTML-ELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARA 309
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETI 441
++LRIH+++M L+ ++L +IA+ +G GA+L +CTEA + +RE+ + ED +
Sbjct: 310 DILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLA 369
Query: 442 DAEILN 447
A+ILN
Sbjct: 370 TAKILN 375
Score = 301 (111.0 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 68/185 (36%), Positives = 107/185 (57%)
Query: 410 YVGADLAALCTEAALQCIR-EKMDVIDLEDETIDAEIL--NSMAVTDEHFKTA--LGTS- 463
YVG + + T+ L + E V+D+ D ++ +A+ + +K L +S
Sbjct: 55 YVGEVVKVMSTKKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSV 114
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+P V +VP+ ++ IGGL+ +E++E ++ ++HPE FE G++ KGVL YGP
Sbjct: 115 DPLVSLMMVEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGP 174
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PG GKTLLA+A+A+ FI V G EL+ + GE VRE+F AR+ AP ++F DE+
Sbjct: 175 PGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 234
Query: 584 DSIAT 588
DSI +
Sbjct: 235 DSIGS 239
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 513 (185.6 bits), Expect = 7.4e-51, Sum P(2) = 7.4e-51
Identities = 112/244 (45%), Positives = 157/244 (64%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ DV GV + + ++ E+ + L++P ++++G K PKG+LLYGPPG+GKTL+ARAVA E
Sbjct: 162 FADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEA 220
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HGEV 324
G FF I+G + + G S +R FE+A++N+P IIF+DEID++ +R G
Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 280
Query: 325 ER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
ER + ++QLL MDG RA VI+I ATNRP+ +DPAL R GRFDR+I + PD GR
Sbjct: 281 EREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRA 340
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID--LEDETI 441
VLR+H+K ++ D DL+ +AK T G GADLA + EAAL RE VI +E +
Sbjct: 341 VLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALEEAV 400
Query: 442 DAEI 445
D I
Sbjct: 401 DRVI 404
Score = 256 (95.2 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 43/124 (34%), Positives = 78/124 (62%)
Query: 466 SALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
S ++ ++P + D+ G++ EL E + +++P +++ G KGVL YGPPG
Sbjct: 148 SRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPG 206
Query: 526 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585
GKTLLA+A+A E F ++ G + + M+ G + VR++F++A+Q++PC++F DE+D+
Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266
Query: 586 IATQ 589
+ Q
Sbjct: 267 VGRQ 270
Score = 38 (18.4 bits), Expect = 7.4e-51, Sum P(2) = 7.4e-51
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 509 KFGMSPSKGVLFYGP----PGCGKTL 530
+FGMS G + YG P G+T+
Sbjct: 515 EFGMSSKLGAVKYGSEHGDPFLGRTM 540
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 108/245 (44%), Positives = 168/245 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 147 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 206
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R E G
Sbjct: 207 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDS 266
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG ++ ++ VI ATNR + +DPAL R GR DR+I+ P+E RL
Sbjct: 267 EVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETI 441
++L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 326 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 385
Query: 442 DAEIL 446
A+++
Sbjct: 386 VAKVM 390
Score = 311 (114.5 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 76/217 (35%), Positives = 122/217 (56%)
Query: 381 RLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLE 437
RL+ R ++ K L +++ L ++ YVG + + + L + E V+DL
Sbjct: 43 RLQAQRNELNAKVRMLREELQL---LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL- 98
Query: 438 DETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
D+ ID + +A+ +E + K +P V +VP+ +E +GGL+ +
Sbjct: 99 DKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIK 158
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI V G EL
Sbjct: 159 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSEL 218
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 219 VQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 255
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 104/234 (44%), Positives = 163/234 (69%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH-GEVE 325
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +T G+ E
Sbjct: 202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDSE 261
Query: 326 -RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
+R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL++
Sbjct: 262 VQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDI 321
Query: 385 LRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L+IH++ M L+ ++L +IA++ G GA++ +CTEA + +RE+ + ED
Sbjct: 322 LKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQED 375
Score = 304 (112.1 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 65/162 (40%), Positives = 100/162 (61%)
Query: 433 VIDLEDETI---DAEILNSMAVTDEHF---KTALGTSNPSALRETVVEVPNVNWEDIGGL 486
V+D+ D+TI D + +A+ +E + K +P V +VP+ +E +GGL
Sbjct: 90 VVDV-DKTINIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGL 148
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
+ +E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLLA+A+A+ + FI V
Sbjct: 149 DKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRV 208
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 209 SGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 250
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 107/245 (43%), Positives = 161/245 (65%)
Query: 197 EDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
+ EN ++V Y+ +GG+ +Q+ Q+RE+VELP+ +P L+K +G+K PKG+LLYGPPG+GKT
Sbjct: 126 KSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKT 185
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
L+ARA+A+ F I I+ K GES +R+ F A+++ P IIF+DEID+I +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 317 R--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
R + T + E +R + +LL +DG + +V +I ATNRP+ +DPAL R GR DR+I+I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV 433
+P+E R+E+L+IH M D+D E + + G+ GADL +CTEA + IR D
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDY 365
Query: 434 IDLED 438
+ ED
Sbjct: 366 VIEED 370
Score = 255 (94.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 45/109 (41%), Positives = 73/109 (66%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
VN+ IGGL R+++E V+ P+ +P +++ G+ KGVL YGPPG GKTLLA+A+A+
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
NF+ + ++ + GES +RE+F+ A++ PC++F DE+D+I
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 107/245 (43%), Positives = 161/245 (65%)
Query: 197 EDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
+ EN ++V Y+ +GG+ +Q+ Q+RE+VELP+ +P L+K +G+K PKG+LLYGPPG+GKT
Sbjct: 126 KSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKT 185
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
L+ARA+A+ F I I+ K GES +R+ F A+++ P IIF+DEID+I +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 317 R--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
R + T + E +R + +LL +DG + +V +I ATNRP+ +DPAL R GR DR+I+I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 374 GVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV 433
+P+E R+E+L+IH M D+D E + + G+ GADL +CTEA + IR D
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDY 365
Query: 434 IDLED 438
+ ED
Sbjct: 366 VIEED 370
Score = 255 (94.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 45/109 (41%), Positives = 73/109 (66%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
VN+ IGGL R+++E V+ P+ +P +++ G+ KGVL YGPPG GKTLLA+A+A+
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
NF+ + ++ + GES +RE+F+ A++ PC++F DE+D+I
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 105/231 (45%), Positives = 152/231 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG + +I++ V P +HP+ F+ G+ PP GILLYGPPG KTLIARA+A+
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALAS 515
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
E F + GPE+ SK G+SE +R F A + AP+I+F DEID++ R EK+ G
Sbjct: 516 EAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSG 575
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
V R+++QLLT +DGL+ + VI++ ATNRP+ +D AL R GR DR I +G+P EV R
Sbjct: 576 -VSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRR 634
Query: 383 EVLRIHTKNMKLSDDV-DLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
+L + TK MK D V ++++ + T GY GA+L A+C AA+ +RE +D
Sbjct: 635 AILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESID 685
Score = 403 (146.9 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 65/124 (52%), Positives = 98/124 (79%)
Query: 465 PSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 524
P+ +R+ ++EVPNV+W DIGG E +K E+Q+ V +P +HPE FE+FG+ P G+L YGPP
Sbjct: 443 PTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPP 502
Query: 525 GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584
GC KTL+A+A+A+E + NF++VKGPEL + W G+SE +R++F +ARQ AP ++FFDE+D
Sbjct: 503 GCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEID 562
Query: 585 SIAT 588
++ +
Sbjct: 563 AVGS 566
Score = 77 (32.2 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
E E ++ L+ + G + + ++ + ++ ++D R RF E +I VP + RL
Sbjct: 329 EKENTKANRALSFLLGDEKKCVILCVRSSE---TLDIGFRV--RFPIEAEITVPTQDERL 383
Query: 383 EVL-RI-HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
++L +I + N L +D +A+ THG+ G DL +L A
Sbjct: 384 DILSKIGNIYNFPLELHLD---VARHTHGFTGGDLCSLLKAA 422
Score = 70 (29.7 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 242 PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNL 290
P +L++G PGSGKTL+ + VA I E + +L G + N+
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELMELNGVTTGNI 320
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 110/237 (46%), Positives = 156/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ Q+ ++RE+VELPL P+LF +G+K PKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
A F + I+ K GES +R+ F A + P +IF+DEID+I +R E T
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + + V +I ATNRP+ +DPAL R GR DR+I+I +P+E GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++VL+IH N+ DVD E IAK G+ ADL +CTEA + IR + D + ED
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEED 370
Score = 280 (103.6 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 56/123 (45%), Positives = 78/123 (63%)
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+P T +V++ +IGGL N REL+E V+ P+ PE F + G+ KGVL YGP
Sbjct: 120 DPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGP 179
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PG GKTLLA+AIA+ +ANF+ V ++ + GES +RE+F AR PCV+F DE+
Sbjct: 180 PGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEI 239
Query: 584 DSI 586
D+I
Sbjct: 240 DAI 242
Score = 44 (20.5 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 277 EIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI-DSIAPKREKTHGEVERRIVSQLLTL 335
E+ A E L+K F++ E + +I +I EI + ++ V+ + +
Sbjct: 26 ELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVR 85
Query: 336 MDGLKSRAHVIVIGA 350
+ +AH++V GA
Sbjct: 86 CANYQDKAHLLVPGA 100
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 110/243 (45%), Positives = 156/243 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VELPL P+ F +G+ PPKGI+LYGPPG+GKTL ARAVA
Sbjct: 175 DVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVA 234
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A IIF DEID+I R +
Sbjct: 235 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAG 294
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+T +DG R ++ V+ ATNRPN++D AL R GR DR+++ G+PD G
Sbjct: 295 GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEG 354
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440
R +LRIH K+M + D+ E IA+ GA+L ++CTEA + IR + V E +
Sbjct: 355 RAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVAT-EKDF 413
Query: 441 IDA 443
+DA
Sbjct: 414 LDA 416
Score = 299 (110.3 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 63/159 (39%), Positives = 90/159 (56%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTS-----NPSALRETVVEVPNVNWEDIGGLE 487
V+ L + +I M V + K A+ +PS V E P+V + D+GG +
Sbjct: 126 VVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCK 185
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
L+E V+ P+ PE+F K G+ P KG++ YGPPG GKTL A+A+AN A FI V
Sbjct: 186 EQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVI 245
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 246 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAI 284
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 99/238 (41%), Positives = 155/238 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ Y+D+GG ++Q+ ++RE+VE+PL P+ F ++G+ PPKG+LLYGPPG+GKTL ARA+A
Sbjct: 158 DITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIA 217
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F C+ G E++ K GE +R+ F+ A+ I+FIDE+D+I R E H
Sbjct: 218 NRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAH 277
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +++ +DG +R ++ V+ ATNRP+++D AL R GR DR I+ +PD G
Sbjct: 278 GDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R + +IH M +S DV E +A+ G+D+ ++CTEA + IR + I +D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKD 395
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 65/159 (40%), Positives = 90/159 (56%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTS-----NPSALRETVVEVPNVNWEDIGGLE 487
V+ L D+ ++I M V + K + +PS TV E P++ + DIGG +
Sbjct: 109 VVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ PE+F G+ P KGVL YGPPG GKTL A+AIAN A FI V
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVI 228
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F A+ C+LF DE+D+I
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 99/238 (41%), Positives = 155/238 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ Y+D+GG ++Q+ ++RE+VE+PL P+ F ++G+ PPKG+LLYGPPG+GKTL ARA+A
Sbjct: 158 DITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIA 217
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F C+ G E++ K GE +R+ F+ A+ I+FIDE+D+I R E H
Sbjct: 218 NRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAH 277
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +++ +DG +R ++ V+ ATNRP+++D AL R GR DR I+ +PD G
Sbjct: 278 GDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R + +IH M +S DV E +A+ G+D+ ++CTEA + IR + I +D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKD 395
Score = 297 (109.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 65/159 (40%), Positives = 90/159 (56%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTS-----NPSALRETVVEVPNVNWEDIGGLE 487
V+ L D+ ++I M V + K + +PS TV E P++ + DIGG +
Sbjct: 109 VVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCK 168
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ PE+F G+ P KGVL YGPPG GKTL A+AIAN A FI V
Sbjct: 169 EQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVI 228
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F A+ C+LF DE+D+I
Sbjct: 229 GSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAI 267
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 501 (181.4 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 112/263 (42%), Positives = 161/263 (61%)
Query: 191 GEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
G+ R +R ++V + DV G+ + ++ E+VE LR P+ F+ +G K PKG LL GP
Sbjct: 140 GKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGP 198
Query: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
PG+GKTL+A+A+A E FF I+G + + G S +R FE+ +KNAP +IFIDEI
Sbjct: 199 PGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEI 258
Query: 311 DSIAPKREKTHG--EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRF 367
D++ R G ER + ++QLL MDG ++ VI+I ATNRP+ +DPAL R GRF
Sbjct: 259 DAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRF 318
Query: 368 DREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI 427
DR+I I +PD GR ++L +H K + + +V++ IA+ T G+ GADLA L E+AL
Sbjct: 319 DRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAA 378
Query: 428 REKMDVIDLED-ETIDAEILNSM 449
R V+ ED E +IL M
Sbjct: 379 RRNKKVVTNEDFEYARDKILMGM 401
Score = 260 (96.6 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 46/109 (42%), Positives = 73/109 (66%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V + D+ G++ K EL E V++ + P+KF+K G KG L GPPG GKTLLAKAIA
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E + F S+ G + + M+ G + VR++F++ +++APC++F DE+D++
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAV 261
Score = 41 (19.5 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 568
K+GMS G L YG + ++ E +N I + +L+T E+ + E +
Sbjct: 511 KWGMSEKVGPLLYGEQNDPNNHI---LSIE-MSNLIDSEVKQLVTDALKEATKILNENIE 566
Query: 569 KARQSAPCVLFFDEL 583
+ A +L ++ L
Sbjct: 567 SLHRVAKALLEYETL 581
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 535 (193.4 bits), Expect = 2.1e-50, P = 2.1e-50
Identities = 122/323 (37%), Positives = 188/323 (58%)
Query: 183 PDTEIFCEGEPVRREDENRLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP 241
PD E + D +D + ++ VGG+ + Q++E+V LPL +P++F+ ++P
Sbjct: 240 PDFGRIREKSDLADSDPLGVDSSLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQP 299
Query: 242 PKGILLYGPPGSGKTLIARAVANETGA-----FFFCINGPEIMSKLAGESESNLRKAFEE 296
P+G+L +GPPG+GKTL+ARA+A + F+ G + +SK GE+E LR FEE
Sbjct: 300 PRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEE 359
Query: 297 AEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
A+ PSIIF DEID +AP R ++ IVS LL LMDG++SR VI+IGATNRP++
Sbjct: 360 AKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPDA 419
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL-ERIAKDTHGYVGADL 415
+DPALRR GRFDRE +PD R +++ IHT+N L +A+ + GY GADL
Sbjct: 420 VDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCSMLAEKSKGYGGADL 479
Query: 416 AALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEV 475
ALCTEAAL I+ + + + + ++ V + F ++ PS+ R ++
Sbjct: 480 RALCTEAALNSIKRTYPQLYRSTKRLQIDP-KTIKVKVKDFVMSMKRMIPSSERSSISPS 538
Query: 476 PNVNWEDIGGLENVKRELQETVQ 498
++ E L +++++T+Q
Sbjct: 539 KPLSPELKPLLNEAFQDIEKTLQ 561
Score = 277 (102.6 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 49/116 (42%), Positives = 81/116 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
++++E +GGL+N +L+E V P+ +PE F++F M P +GVLF+GPPG GKTL+A+A+A
Sbjct: 262 SLSFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALA 321
Query: 537 NECQA-----NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
C + +F KG + L+ W GE+E +R +F++A+ + P ++FFDE+D +A
Sbjct: 322 AACSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLA 377
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 118/324 (36%), Positives = 188/324 (58%)
Query: 134 NLFDAYLKPYFTEAYRPV---RKGDLFLVRGGMRSVEFKVI-------ETDPPEYCVVAP 183
+L+D LK E +R + ++G +++ R F + E P + V
Sbjct: 97 DLYDNNLK-LSHEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNK 155
Query: 184 DTEIFCEGEPVRREDENRLDEV------GYDDVGGVRKQMAQIRELVELPLRHPQLFKSI 237
D+ + + P ++ + EV Y D+GG+ KQ+ + E + LP+ H + F+ I
Sbjct: 156 DSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKI 215
Query: 238 GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA 297
G+KPPKG+L++GPPG+GKTL+ARA A++T A F + GP+++ G+ +R AF A
Sbjct: 216 GIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLA 275
Query: 298 EKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
++ AP+IIFIDE+D+I KR + G+ E +R + +LL +DG + V VI ATNRP
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRP 335
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGAD 414
+++DPAL R GR DR+I++ P+E R +L+IH++ M + DV+ E +A+ T + GA
Sbjct: 336 DTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQ 395
Query: 415 LAALCTEAALQCIREKMDVIDLED 438
L A+C EA + +R ID ED
Sbjct: 396 LKAVCVEAGMIALRRGATEIDHED 419
Score = 305 (112.4 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 55/118 (46%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V+E P+ ++ DIGGL+ +L E + P+ H EKFEK G+ P KGVL +GPPG GKTLL
Sbjct: 177 VIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLL 236
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A++ A F+ + GP+L+ M+ G+ VR+ F+ A++ AP ++F DELD+I T+
Sbjct: 237 ARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Score = 41 (19.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFK 457
++ +DLEDE + EI + + D + K
Sbjct: 78 VESLDLEDEEEENEIKDEYDLYDNNLK 104
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 118/324 (36%), Positives = 188/324 (58%)
Query: 134 NLFDAYLKPYFTEAYRPV---RKGDLFLVRGGMRSVEFKVI-------ETDPPEYCVVAP 183
+L+D LK E +R + ++G +++ R F + E P + V
Sbjct: 97 DLYDNNLK-LSHEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNK 155
Query: 184 DTEIFCEGEPVRREDENRLDEV------GYDDVGGVRKQMAQIRELVELPLRHPQLFKSI 237
D+ + + P ++ + EV Y D+GG+ KQ+ + E + LP+ H + F+ I
Sbjct: 156 DSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKI 215
Query: 238 GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA 297
G+KPPKG+L++GPPG+GKTL+ARA A++T A F + GP+++ G+ +R AF A
Sbjct: 216 GIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLA 275
Query: 298 EKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
++ AP+IIFIDE+D+I KR + G+ E +R + +LL +DG + V VI ATNRP
Sbjct: 276 KEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRP 335
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGAD 414
+++DPAL R GR DR+I++ P+E R +L+IH++ M + DV+ E +A+ T + GA
Sbjct: 336 DTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQ 395
Query: 415 LAALCTEAALQCIREKMDVIDLED 438
L A+C EA + +R ID ED
Sbjct: 396 LKAVCVEAGMIALRRGATEIDHED 419
Score = 305 (112.4 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 55/118 (46%), Positives = 82/118 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V+E P+ ++ DIGGL+ +L E + P+ H EKFEK G+ P KGVL +GPPG GKTLL
Sbjct: 177 VIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLL 236
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A++ A F+ + GP+L+ M+ G+ VR+ F+ A++ AP ++F DELD+I T+
Sbjct: 237 ARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Score = 41 (19.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFK 457
++ +DLEDE + EI + + D + K
Sbjct: 78 VESLDLEDEEEENEIKDEYDLYDNNLK 104
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 111/281 (39%), Positives = 175/281 (62%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
+R GDL G+ + +++T PPEY D+ + DE +E Y D+
Sbjct: 127 LRPGDLV----GINKDSYIILDTLPPEY-----DSRV-----KAMEIDEKPTEE--YSDI 170
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E V LP+ H + F+SIG+KPPKG+L+YGPPG+GKTL+ARA A +T + +
Sbjct: 171 GGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTY 230
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RR 327
+ GP+++ G+ +R AF A++ P+IIFIDE+D+I KR + G+ E +R
Sbjct: 231 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQR 290
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG S A++ VI ATNR + +DPAL R GR DR+I+ +P+E R +L+I
Sbjct: 291 TMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQI 350
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR 428
H++ M +S DV+ + +A+ + + GA L A+C EA + +R
Sbjct: 351 HSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391
Score = 282 (104.3 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 52/116 (44%), Positives = 75/116 (64%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E P + DIGGL+ +EL E V P+ H E+FE G+ P KGVL YGPPG GKTLLA+
Sbjct: 161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A A + + ++ + GP+L+ M+ G+ VR+ F A++ P ++F DELD+I T+
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTK 276
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 116/265 (43%), Positives = 162/265 (61%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DDV G+ + ++ E+VE LR+PQ F +G K PKG LL GPPG+GKTL+ARA+A
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG-- 322
E G FF I+G + + G S +R FE+A+KNAP I+FIDEID++ R +G
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGG 271
Query: 323 -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ + ++QLL MDG ++ VI++ ATNR + +DPAL R GRFDR + +G PD GR
Sbjct: 272 NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGR 331
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ET 440
++L +H + L DVDL IA+ T G+ GADLA L EAAL R + +ED E
Sbjct: 332 EKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFEN 391
Query: 441 IDAEIL-----NSMAVT-DEHFKTA 459
+++ SM +T D+ KTA
Sbjct: 392 AKDKVMMGAERRSMVLTQDQKEKTA 416
Score = 259 (96.2 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 44/109 (40%), Positives = 75/109 (68%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++D+ G++ K EL+E V++ + +P+KF + G KG L GPPG GKTLLA+AIA
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E F ++ G + + M+ G + VR++F++A+++APC++F DE+D++
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 116/265 (43%), Positives = 162/265 (61%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DDV G+ + ++ E+VE LR+PQ F +G K PKG LL GPPG+GKTL+ARA+A
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG-- 322
E G FF I+G + + G S +R FE+A+KNAP I+FIDEID++ R +G
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGG 271
Query: 323 -EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ + ++QLL MDG ++ VI++ ATNR + +DPAL R GRFDR + +G PD GR
Sbjct: 272 NDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGR 331
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ET 440
++L +H + L DVDL IA+ T G+ GADLA L EAAL R + +ED E
Sbjct: 332 EKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFEN 391
Query: 441 IDAEIL-----NSMAVT-DEHFKTA 459
+++ SM +T D+ KTA
Sbjct: 392 AKDKVMMGAERRSMVLTQDQKEKTA 416
Score = 259 (96.2 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 44/109 (40%), Positives = 75/109 (68%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++D+ G++ K EL+E V++ + +P+KF + G KG L GPPG GKTLLA+AIA
Sbjct: 153 VTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAG 211
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E F ++ G + + M+ G + VR++F++A+++APC++F DE+D++
Sbjct: 212 EAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAV 260
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 105/252 (41%), Positives = 160/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ Y DVGG ++Q+ ++RE+VE+PL HP+ F ++G+ PPKG+L+YGPPG+GKTL ARAVA
Sbjct: 166 DITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVA 225
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R F+ A IIF DE+D+I R +
Sbjct: 226 NRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAG 285
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD G
Sbjct: 286 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEG 345
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + IH K M + D+ E +A+ GAD+ ++CTEA + IR + V+ +D
Sbjct: 346 RAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFL 405
Query: 439 ETIDAEILNSMA 450
E ID +++ S A
Sbjct: 406 EAID-KVIKSYA 416
Score = 296 (109.3 bits), Expect = 4.7e-24, P = 4.7e-24
Identities = 54/115 (46%), Positives = 76/115 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P++ ++D+GG + +L+E V+ P+ HPEKF G+ P KGVL YGPPG GKTL
Sbjct: 161 VEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLC 220
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A+A+AN A F+ V G EL+ + GE VR++F AR C++FFDE+D+I
Sbjct: 221 ARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAI 275
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 105/238 (44%), Positives = 157/238 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ + VGG+ +Q+ ++RE++ELPL++P+LF +G+KPPKG+LLYGPPG+GKTL+ARAVA
Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
G F + I+ K GES +R+ F A+++ P +IF+DEID+I +R E T
Sbjct: 188 ASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTS 247
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL MDG +I ATNRP+++DPAL R GR DR+I+I +P+EVG
Sbjct: 248 ADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R+E+L+IH + + ++D E + K T G GADL + TEA I+E D + D
Sbjct: 308 RMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSD 365
Score = 271 (100.5 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 50/115 (43%), Positives = 77/115 (66%)
Query: 473 VEVP-NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
+E P ++++ +GGL REL+E ++ P+++PE F + G+ P KGVL YGPPG GKTLL
Sbjct: 123 IEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLL 182
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A+A+A NF+ V ++ + GES +RE+F A++ PCV+F DE+D+I
Sbjct: 183 ARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAI 237
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 108/251 (43%), Positives = 159/251 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VELPL P+ F +G+ PPKGILLYGPPG+GKTL ARAVA
Sbjct: 182 DVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVA 241
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A IIF DE+D+I R +
Sbjct: 242 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAG 301
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+T +DG R ++ V+ ATNRPN++DPAL R GR DR+++ +PD G
Sbjct: 302 GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 361
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + RIH+K M + D+ E I++ GA+L ++CTEA + IR + V + +D
Sbjct: 362 RANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFL 421
Query: 439 ETIDAEILNSM 449
+ +D I ++
Sbjct: 422 KAVDKVIKGNL 432
Score = 310 (114.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 66/159 (41%), Positives = 93/159 (58%)
Query: 433 VIDLEDETIDAEILNSMAV-TDEH-FKTALGTS---NPSALRETVVEVPNVNWEDIGGLE 487
V+ L + +I M V D H ++ L +PS TV E P+V + D+GG +
Sbjct: 133 VVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGCK 192
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ PE+F K G+ P KG+L YGPPG GKTL A+A+AN A FI V
Sbjct: 193 EQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVI 252
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 253 GSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAI 291
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 112/291 (38%), Positives = 174/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + +++T P EY D+ + DE ++ Y+D+
Sbjct: 130 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 173
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+ +GV+PPKG+LLYGPPG+GKTL+ARA A +T A F
Sbjct: 174 GGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 233
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RR 327
+ GP+++ G+ +R AF+ A++ AP IIFIDEID+I KR + G+ E +R
Sbjct: 234 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQR 293
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG S + VI ATNR + +DPAL R GR DR+I+ P E R +L+I
Sbjct: 294 TMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQI 353
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M + DV+ E +A+ T + GA L A+C EA + +R ++ ED
Sbjct: 354 HSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 404
Score = 308 (113.5 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 56/118 (47%), Positives = 80/118 (67%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P ++ DIGGLE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct: 162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ APC++F DE+D+I T+
Sbjct: 222 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTK 279
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 489 (177.2 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 100/250 (40%), Positives = 161/250 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++G+D +GG+R+ + + ++LP ++P+LF ++ ++ G+LLYGPPG+GKTL+A VA
Sbjct: 839 DLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVA 898
Query: 264 NETGAFFFCIN-GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG 322
E+G + GPE++SK G SE +R F A+ P I+F DE +SIAP+R +
Sbjct: 899 RESGMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNT 958
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR D+ + PD+V RL
Sbjct: 959 GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRL 1018
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ET 440
E+L + + ++ L++DVDL+ +A T + GADL AL A L+ + ++ L+D +
Sbjct: 1019 EILNVLSASLPLAEDVDLQHVASLTDSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSS 1078
Query: 441 IDAEI-LNSM 449
D+++ L+SM
Sbjct: 1079 SDSDLSLSSM 1088
Score = 436 (158.5 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 131/399 (32%), Positives = 202/399 (50%)
Query: 212 GVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFF 271
GV L+ PL + G++ +LL G GSGK+ +A+A+ E AF
Sbjct: 566 GVSSMEHITHSLLGRPLSRQLMSLMAGLRNG-ALLLTGGKGSGKSTLAKAICKE--AFDV 622
Query: 272 CINGPEIMS--KLAGESESNLRK----AFEEAEKNAPSIIFIDEIDSIA-----PKREKT 320
EI+ L G+ NL+K AF EA PS++ +D++D +A P+ E +
Sbjct: 623 LDAHVEIVDCKALRGKRLENLQKTIVAAFSEASWRQPSVVLLDDLDLVAGLPALPEHEHS 682
Query: 321 HGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRP-NSIDPAL---RRFGRFDREIDIGV 375
V+ +R+ L + L S ++ + AT++ +S+ P L + F I
Sbjct: 683 PEAVQSQRLAHALNDMTKELISMGSLVALIATSQSQHSLHPLLVSAQGIHLFQCVQHIQP 742
Query: 376 PDEVGRLEVLRIHTKN-----MKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
PD+ R E+L KN M D+DL+RIAK+T G+V D L A I +
Sbjct: 743 PDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAKETEGFVARDFIVLVDRA----IHSR 798
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLENV 489
L ++++ + +T F+ AL P++LR + P ++ W+ IGGL V
Sbjct: 799 -----LSNQSVSTR--EELVLTTLDFQKALQGFVPASLRNVNLHKPRDLGWDHIGGLREV 851
Query: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK-G 548
++ L +T+Q P ++PE F + GVL YGPPG GKTLLA +A E + ++ G
Sbjct: 852 RQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARESGMILLVLRYG 911
Query: 549 PELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
PELL+ + G SE VR+IF +A+ + PC+LFFDE +SIA
Sbjct: 912 PELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIA 950
Score = 50 (22.7 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 437 EDETID--AEILNSMAVTDEHFKTALGTSNPS 466
ED+ ++ I S+A++ H TAL + PS
Sbjct: 1216 EDDALNQPGPIRTSLAISQSHLMTALSHTRPS 1247
Score = 45 (20.9 bits), Expect = 6.4e-50, Sum P(3) = 6.4e-50
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 168 FKVIETDPPEYCVVAPDTEIF 188
F+V ++ PP C +P T +F
Sbjct: 289 FRVCKSQPPSICNASP-TSVF 308
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 488 (176.8 bits), Expect = 6.9e-50, Sum P(3) = 6.9e-50
Identities = 113/308 (36%), Positives = 178/308 (57%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V ++DVGG+ + E ++LPL P+LF G+K GIL YGPPG+GKTL+A+
Sbjct: 1018 KIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAK 1076
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--E 318
A+A E FF + GPE+++ GESE+N+R+ F+ A P ++F DE+DS+APKR +
Sbjct: 1077 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQ 1136
Query: 319 KTHGEVERRIVSQLLTLMDGL----KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
G V RIVSQLL +DG+ ++ V VIGATNRP+ +D AL R GRFD+ + +G
Sbjct: 1137 GDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLG 1196
Query: 375 VPD-EVGRLEVLRIHTKNMKLSDDVDLERIAKDTH-GYVGADLAALCTEAALQCIREKMD 432
V D + +L T+ L+ D+ L R+++ Y GADL ALC++A L+ I K
Sbjct: 1197 VSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRKAT 1256
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKT----ALGTSNPSALRETVVEVPNVNWEDIGGLEN 488
+D + + + + S A +H T A+ + + VP+V+ +++ E
Sbjct: 1257 AVDEKIKQLPGGPV-STAYFFDHLSTPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFER 1315
Query: 489 VKRELQET 496
+++ + T
Sbjct: 1316 IRQMFEST 1323
Score = 470 (170.5 bits), Expect = 5.7e-48, Sum P(3) = 5.7e-48
Identities = 132/366 (36%), Positives = 193/366 (52%)
Query: 237 IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLR-KAFE 295
+G+KP +L GK +A E G F I+ +I+++ G + +++ +A+
Sbjct: 777 LGMKPVVILLRSQQRHIGKASLATRACAEIGLHTFPIDAYDILTE-GGANGGDVKTEAYL 835
Query: 296 EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPN 355
+A D ++ K H EV ++++ M + + A VI I T
Sbjct: 836 KARAERAFHCGAD-CTALLIK----HIEV--LTADRIVSAMTEILADARVI-IATTTDVE 887
Query: 356 SIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IHTKNMKLSDDVDLERIAKDTHGYVGA 413
I A+R F E ++ P+E R +LR + +++KL+ DVDL +A T V
Sbjct: 888 QIPEAIRSM--FTHEFELTAPEEKEREGILRNAVSERSIKLAPDVDLGTVALKTAALVAG 945
Query: 414 DLAALCTEAAL-QCIR-EKM-DVIDLEDETIDAEILNSM--------AVTDEHFKTALGT 462
DL + A++ + R EK+ + + T + + + VT F A+
Sbjct: 946 DLVDVVERASVARSTRLEKLAESASKQSPTSKITVRDVLLAGGEAVRGVTKADFDAAVDA 1005
Query: 463 SNPSALRET-VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 521
+ + ++PNV+WED+GGL NVK L ET+Q P+E PE F K GM G+LFY
Sbjct: 1006 ARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFY 1064
Query: 522 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
GPPG GKTLLAKAIA E NF SVKGPELL M+ GESEANVR +F +AR + PCV+FFD
Sbjct: 1065 GPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFD 1124
Query: 582 ELDSIA 587
ELDS+A
Sbjct: 1125 ELDSVA 1130
Score = 56 (24.8 bits), Expect = 6.9e-50, Sum P(3) = 6.9e-50
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 25 KKAPNRLVVDEAINDDN--SVVVLHPDTMEKLQFFRGDTILIKGKK 68
++ PN L+ + +DD+ +VV + T+ K+ F GD + I+ +
Sbjct: 423 RRVPNELLYPKPRDDDDVEAVVFVDISTLAKIGCFSGDWVRIEASE 468
Score = 43 (20.2 bits), Expect = 6.9e-50, Sum P(3) = 6.9e-50
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 135 LFDAYLKPYFTEAYRPVRKGDL 156
LF A LK YF R ++ GDL
Sbjct: 603 LFSA-LKQYFESKRRLLKSGDL 623
Score = 40 (19.1 bits), Expect = 1.4e-49, Sum P(3) = 1.4e-49
Identities = 20/90 (22%), Positives = 38/90 (42%)
Query: 67 KKRKDTVCIALADDTCE-EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVD 125
K+R+ + A+++ + + P + + V + GD+V V + A V R+ L
Sbjct: 909 KEREGILRNAVSERSIKLAPDVDLGTVALKTAALVAGDLVDVVERASVARSTRLEKLAES 968
Query: 126 DTIEGVTGNLFDAYLKPYFTEAYRPVRKGD 155
+ + T + + EA R V K D
Sbjct: 969 ASKQSPTSKITVRDVLLAGGEAVRGVTKAD 998
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 313 (115.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 80/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLIVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 273 INGPEIMSKLAGESESNLRKAF 294
++GPE M G++ S LR+ +
Sbjct: 3 LDGPEQMELEEGKAGSGLRQYY 24
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 313 (115.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 80/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLIVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 273 INGPEIMSKLAGESESNLRKAF 294
++GPE M G++ S LR+ +
Sbjct: 3 LDGPEQMELEEGKAGSGLRQYY 24
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 313 (115.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 80/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLIVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 273 INGPEIMSKLAGESESNLRKAF 294
++GPE M G++ S LR+ +
Sbjct: 3 LDGPEQMELEEGKAGSGLRQYY 24
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 313 (115.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 80/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLIVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 273 INGPEIMSKLAGESESNLRKAF 294
++GPE M G++ S LR+ +
Sbjct: 3 LDGPEQMELEEGKAGSGLRQYY 24
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 313 (115.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 80/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLIVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
Score = 38 (18.4 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 273 INGPEIMSKLAGESESNLRKAF 294
++GPE M G++ S LR+ +
Sbjct: 3 LDGPEQMELEEGKAGSGLRQYY 24
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 276 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 335
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 336 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 395
Query: 443 AEIL 446
A+++
Sbjct: 396 AKVM 399
Score = 312 (114.9 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 79/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
++ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 38 DLQLVVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 95
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 96 KVHPEGKFVVDI-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 154
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 264
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 275
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 276 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 335
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 336 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 395
Query: 443 AEIL 446
A+++
Sbjct: 396 AKVM 399
Score = 311 (114.5 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 79/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
++ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 38 DLQLVVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 95
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 96 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 154
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 264
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 311 (114.5 bits), Expect = 4.1e-27, P = 4.1e-27
Identities = 79/230 (34%), Positives = 127/230 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V ++ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 30 ELQLTVNEKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 154 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 213
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 214 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 273
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 274 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 333
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 334 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 393
Query: 443 AEIL 446
A+++
Sbjct: 394 AKVM 397
Score = 310 (114.2 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 76/214 (35%), Positives = 120/214 (56%)
Query: 386 RIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQCIR-EKMDVIDLEDET 440
R+ + +L+ V L R + ++ YVG + A+ + L + E V+D+ D+
Sbjct: 50 RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDV-DKN 108
Query: 441 IDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
ID + +A+ ++ + K +P V +VP+ +E IGGL+ +E++
Sbjct: 109 IDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIK 168
Query: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 554
E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 169 EVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 228
Query: 555 WFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
+ GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 229 FIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 262
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/244 (42%), Positives = 168/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 148 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 207
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THGEV 324
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R + + G+
Sbjct: 208 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDS 267
Query: 325 E-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 268 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 327
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 328 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 387
Query: 443 AEIL 446
A+++
Sbjct: 388 AKVM 391
Score = 307 (113.1 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 78/230 (33%), Positives = 126/230 (54%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
E+ + V ++ L R+ + +L+ V L R + ++ YVG + + + L
Sbjct: 30 ELQLTVNEKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRVMDKKKVLV 87
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 88 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 146
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 256
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 507 (183.5 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 104/249 (41%), Positives = 162/249 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++G+D +GG+ + + + ++LP ++P+LF ++ ++ GILLYGPPG+GKTL+A VA
Sbjct: 836 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 895
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
E+G F I GPE++SK G SE +R F A+ P I+F DE +SIAP+R +
Sbjct: 896 RESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTG 955
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR D+ + PD+V RLE
Sbjct: 956 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1015
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ETI 441
+L + +K++ L+DDVDL+ +A T + GADL AL A L+ ++ ++ L D +
Sbjct: 1016 ILTVLSKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLEALQGRLLPGGLHDGGSSS 1075
Query: 442 DAEI-LNSM 449
D+++ L+SM
Sbjct: 1076 DSDLSLSSM 1084
Score = 444 (161.4 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 126/410 (30%), Positives = 204/410 (49%)
Query: 202 LDEVGYDDVGGVRK-QMAQIRELVELPLRHP---QLFKSIGVKPPKGILLYGPPGSGKTL 257
L + +GGV ++ + + L P QL + +L+ G GSGK+
Sbjct: 548 LPSLTLSSLGGVSSLSVSAMEHITHSLLGRPLSRQLMALVAGLRNGALLITGGKGSGKST 607
Query: 258 IARAVANET----GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 313
+A+A+ E A ++ + K + L AF EA PS+I +D++D I
Sbjct: 608 LAKAICKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLI 667
Query: 314 A-----PKREKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNR-PNSIDPAL---RR 363
A P+ E + V+ +R+ L ++ S ++ + AT++ +S+ P+L +
Sbjct: 668 AGLPSTPEHEHSPEAVQSQRLAHALNNMIKEFVSMGSLVALIATSQLQHSLHPSLVSAQG 727
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKN-----MKLSDDVDLERIAKDTHGYVGADLAAL 418
F I PD+ R E+L KN + S D+DL+ IAK+T +V D L
Sbjct: 728 VHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFVARDFTVL 787
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-N 477
A + + ++ T + + +T F+ AL P++LR + P +
Sbjct: 788 VDRAIHSSLSRQ------QNPTREG-----LTLTTADFQKALRGFLPASLRNVNLHKPRD 836
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
+ W+ IGGL V++ L +T+Q P ++PE F + G+L YGPPG GKTLLA +A
Sbjct: 837 LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVAR 896
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E NFIS++GPELL+ + G SE VR++F +A+ + PC+LFFDE +SIA
Sbjct: 897 ESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIA 946
Score = 51 (23.0 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 437 EDETID--AEILNSMAVTDEHFKTALGTSNPS 466
EDE+++ I S A++ H TAL + PS
Sbjct: 1213 EDESLNQPGPIKTSFAISQAHLMTALAHTRPS 1244
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 505 (182.8 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 115/271 (42%), Positives = 162/271 (59%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V +DDVGG+ I + V+LPL H LF S G++ G+LLYGPPG+GKTL+A+
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT 320
AVA E F + GPE+++ GESE N+R FE+A P +IF DE+DS+AP R +
Sbjct: 710 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGAS 769
Query: 321 --HGEVERRIVSQLLTLMDGLK-SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV-P 376
G V R+VSQ+L +DGL S + +IGA+NRP+ IDPAL R GRFD+ + +GV
Sbjct: 770 GDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNA 829
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHG-YVGADLAALCTEAALQCIREKMDVID 435
D R VL+ T+ KLS+DV L +AK + GAD+ ALC +A Q + K+ D
Sbjct: 830 DASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSD 889
Query: 436 LEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
D + + +S+ V F A+ +PS
Sbjct: 890 SGDMPTEEDDPDSVVVEYVDFIKAMDQLSPS 920
Score = 451 (163.8 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 112/268 (41%), Positives = 152/268 (56%)
Query: 340 KSRAH-VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKN----MKL 394
K R H V++I + I P +RR F EI +G ++ R E+L + + +
Sbjct: 501 KFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNI 558
Query: 395 SDDVDLERIAKDTHGYVGADLAALCTEAALQCI----REKMDVIDLEDET--ID----AE 444
S D ++ + T G++ DL AL +A E + L D+ +D ++
Sbjct: 559 SSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQ 618
Query: 445 ILNSMA--VTDEHFKTALGTS---NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQY 499
I NS E F AL S N SAL +VPNV W+D+GGLE+VK + +TVQ
Sbjct: 619 IDNSTEKLTAKEDFTKALDRSKKRNASALGAP--KVPNVKWDDVGGLEDVKTSILDTVQL 676
Query: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
P+ H + F G+ GVL YGPPG GKTLLAKA+A EC NF+SVKGPEL+ M+ GES
Sbjct: 677 PLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 735
Query: 560 EANVREIFDKARQSAPCVLFFDELDSIA 587
E NVR+IF+KAR + PCV+FFDELDS+A
Sbjct: 736 EKNVRDIFEKARSARPCVIFFDELDSLA 763
Score = 75 (31.5 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 245 ILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSI 304
+LL+G PG GK + + VA G + +++ ++ + L + F A + +P+I
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTI 439
Query: 305 IFIDEID 311
+ + D
Sbjct: 440 LLLRHFD 446
Score = 46 (21.3 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 11 KGTKRDFSTAILE-RKKAPNRLVVDEAIN--DDNSVVVLHPDTMEKLQFFRGDTILIK 65
+G R S IL RK N V D ++ DD+++V L +++L G +++K
Sbjct: 43 RGNAR-LSAGILRWRKDGEN--VSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVK 97
Score = 39 (18.8 bits), Expect = 6.3e-49, Sum P(2) = 6.3e-49
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 2 SNQAESSDAKGT-KRDFSTAILERKKAPN 29
++Q ++S K T K DF+ A L+R K N
Sbjct: 616 ASQIDNSTEKLTAKEDFTKA-LDRSKKRN 643
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 489 (177.2 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 103/242 (42%), Positives = 151/242 (62%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + DV G + +++E+V+ L++P + ++G K PKG LL GPPG+GKTL+ARAVA
Sbjct: 259 VSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG 317
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG-- 322
E G FF E + G S +R FE+A+ AP I+FIDEID++ +R G
Sbjct: 318 EAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGG 377
Query: 323 EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
ER + ++QLLT MDG + VIV+ ATNRP+ +D AL R GRFDR++ + PD GR
Sbjct: 378 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGR 437
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
+++L++H++ L DVD +++A+ T G+ GADL L EAA+ R ++ I +DE
Sbjct: 438 VKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEIS-KDEIS 496
Query: 442 DA 443
DA
Sbjct: 497 DA 498
Score = 252 (93.8 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 48/118 (40%), Positives = 73/118 (61%)
Query: 474 EVPN--VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
EVP V++ D+ G + K ELQE V + +++P+K+ G KG L GPPG GKTLL
Sbjct: 253 EVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLL 311
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A+A E F S E + ++ G + VR++F+KA+ APC++F DE+D++ Q
Sbjct: 312 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQ 369
Score = 49 (22.3 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 31/130 (23%), Positives = 58/130 (44%)
Query: 446 LNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ-ETVQYPVEHP 504
L A ++E ++ L + + + V V E I G ENV + +Q
Sbjct: 555 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVAR 614
Query: 505 EKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVR 564
+ E+FG S G + G PG G + + +++ Q ++ S+ +++ +A VR
Sbjct: 615 QMIERFGFSKKIGQVAVGGPG-GNPFMGQQMSS--QKDY-SMATADIV-------DAEVR 663
Query: 565 EIFDKARQSA 574
E+ +KA + A
Sbjct: 664 ELVEKAYKRA 673
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 108/237 (45%), Positives = 152/237 (64%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 137 VSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 196
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
A F I I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 197 NIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA 256
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL +DG V +I ATNRP+ +DPAL R GR DR+I+I +P+E R
Sbjct: 257 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQAR 316
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+EVL+IH + ++D E + K G+ GADL +CTEA + IR + D + ED
Sbjct: 317 MEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHED 373
Score = 284 (105.0 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 51/110 (46%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 136 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ ANF+ + ++ + GES +RE+F AR PC++F DE+D+I
Sbjct: 196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAI 245
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 99/243 (40%), Positives = 157/243 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y+DVGG ++Q+ ++RE+VELP+ HP+ F +G+ PPKG+L YGPPG+GKTL+ARAVA
Sbjct: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R +
Sbjct: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD
Sbjct: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440
R ++ +IHT+ M D+ E +A+ GAD+ ++CTEA + IR + + E +
Sbjct: 344 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVT-EKDF 402
Query: 441 IDA 443
+DA
Sbjct: 403 LDA 405
Score = 317 (116.6 bits), Expect = 9.1e-28, P = 9.1e-28
Identities = 61/123 (49%), Positives = 81/123 (65%)
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+PS TV E P+V + D+GG + +++E V+ P+ HPEKF K G+ P KGVL YGP
Sbjct: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PG GKTLLA+A+AN A FI V G EL+ + GE VRE+F AR C++FFDE+
Sbjct: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
Query: 584 DSI 586
D+I
Sbjct: 271 DAI 273
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/244 (42%), Positives = 167/244 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ +GG+ KQ+ +I+E++ELP++HP+ F+++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 143 YEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 202
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHG---E 323
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI + E G E
Sbjct: 203 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSE 262
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V+R ++ +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ P+E RL+
Sbjct: 263 VQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 321
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-ETID 442
+L+IH++ M L+ ++L +IA+ G GA++ +CTEA + +RE+ + ED E
Sbjct: 322 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 381
Query: 443 AEIL 446
A+++
Sbjct: 382 AKVM 385
Score = 314 (115.6 bits), Expect = 6.8e-26, P = 6.8e-26
Identities = 79/232 (34%), Positives = 129/232 (55%)
Query: 370 EIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLER----IAKDTHGYVGADLAALCTEAALQ 425
++ + V D+ L R+ + +L+ V L R + ++ YVG + A+ + L
Sbjct: 25 DLQLVVNDKSQNLR--RLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLV 82
Query: 426 CIR-EKMDVIDLEDETIDAEILNS---MAVTDEHF---KTALGTSNPSALRETVVEVPNV 478
+ E V+D+ D+ ID + +A+ ++ + K +P V +VP+
Sbjct: 83 KVHPEGKFVVDV-DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDS 141
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
+E IGGL+ +E++E ++ PV+HPE FE G++ KGVL YGPPG GKTLLA+A+A+
Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQV 590
FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +++
Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRL 253
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 106/237 (44%), Positives = 153/237 (64%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
A F + I+ K GES +R+ F A ++ P IIF+DEID+I +R E T
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL +DG V +I ATNRP+ +DPAL R GR DR+I+I +P+E R
Sbjct: 256 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+E+L+IH + ++D E I K G+ GADL +CTEA + IR + D + ED
Sbjct: 316 MEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHED 372
Score = 286 (105.7 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 51/110 (46%), Positives = 78/110 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+++ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ ANF+ V ++ + GES +RE+F+ AR+ PC++F DE+D+I
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAI 244
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 109/238 (45%), Positives = 151/238 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y D+GG+ Q +IRE VELPL H +L+K IG+ PP+G+L+YGPPG GKT++A+AVA
Sbjct: 156 DVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVA 215
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
+ T A F + G E + K GE +R F A++NAP+IIFIDEID+IA KR +T
Sbjct: 216 HHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG 275
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +RI+ +LL MDG +V VI ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 276 ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 335
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ V T M LS+DVDLE GAD+ A+C EA + +RE ++ +D
Sbjct: 336 KRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKD 393
Score = 314 (115.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 63/156 (40%), Positives = 98/156 (62%)
Query: 440 TIDAEILNSMA--VTDEHFKTALGTSNPSALRETVV----EVPNVNWEDIGGLENVKREL 493
TID E+L A +H + P A + E P+V++ DIGG++ K+E+
Sbjct: 113 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEI 172
Query: 494 QETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLT 553
+E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAKA+A+ A+FI V G E +
Sbjct: 173 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
Query: 554 MWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+ GE VR++F A+++AP ++F DE+D+IAT+
Sbjct: 233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATK 268
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 108/234 (46%), Positives = 151/234 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y+D+GG Q +IRE VELPL H +L+K IG+ PP+G+LLYGPPG+GKT++A+AVA
Sbjct: 151 DVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA 210
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E + K GE +R F A++NAP+IIFIDE+D+IA R +T
Sbjct: 211 NHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG 270
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +RI+ +LL MDG +V VI ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 271 ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 330
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
+ V ++ T M LSD+VDLE A++AA+C EA + +R+ VI
Sbjct: 331 KRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 384
Score = 298 (110.0 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 54/115 (46%), Positives = 81/115 (70%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E P+V++ DIGG + K+E++E V+ P+ H E +++ G+ P +GVL YGPPG GKT+LAK
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
A+AN A FI V G E + + GE VR++F A+++AP ++F DE+D+IAT
Sbjct: 208 AVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIAT 262
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 105/237 (44%), Positives = 154/237 (64%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ Y VGG+ Q+ ++RE +ELPL +P+LF +G+KPPKG+LLYGPPG+GKTL+ARA+A+
Sbjct: 136 ISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIAS 195
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
A F + I+ K GES +R+ F A ++ P IIF+DEID+I +R E T
Sbjct: 196 NIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL +DG + V +I ATNRP+ +DPAL R GR DR+I+I +P+E R
Sbjct: 256 DREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+++L+IH + ++D E I K G+ GADL +CTEA + IR + D + ED
Sbjct: 316 MDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHED 372
Score = 286 (105.7 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 51/110 (46%), Positives = 78/110 (70%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
N+++ +GGL + REL+E+++ P+ +PE F + G+ P KGVL YGPPG GKTLLA+AIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+ ANF+ V ++ + GES +RE+F+ AR+ PC++F DE+D+I
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAI 244
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 106/238 (44%), Positives = 156/238 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
++ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RL++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Score = 281 (104.0 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 49/110 (44%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 252
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 106/238 (44%), Positives = 156/238 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
++ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RL++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Score = 281 (104.0 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 49/110 (44%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 106/237 (44%), Positives = 156/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH+ + D+D E I K + G+ GADL +CTEA + IR + + ED
Sbjct: 310 LDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQED 366
Score = 281 (104.0 bits), Expect = 6.2e-23, P = 6.2e-23
Identities = 49/110 (44%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 507 (183.5 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 104/249 (41%), Positives = 162/249 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++G+D +GG+ + + + ++LP ++P+LF ++ ++ GILLYGPPG+GKTL+A VA
Sbjct: 837 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 896
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
E+G F I GPE++SK G SE +R F A+ P I+F DE +SIAP+R +
Sbjct: 897 RESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTG 956
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR D+ + PD+V RLE
Sbjct: 957 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1016
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ETI 441
+L + +K++ L+DDVDL+ +A T + GADL AL A L+ ++ ++ L D +
Sbjct: 1017 ILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQGRLLPSGLPDGGSSS 1076
Query: 442 DAEI-LNSM 449
D+++ L+SM
Sbjct: 1077 DSDLSLSSM 1085
Score = 441 (160.3 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 131/411 (31%), Positives = 200/411 (48%)
Query: 202 LDEVGYDDVGGVRKQMAQIRE-----LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
L + +GGV A E L+ PL QL + +L+ G GSGK+
Sbjct: 549 LPSLTLSSLGGVSALGASAMEHITHSLLGRPLSR-QLMALVAGLRNGALLITGGKGSGKS 607
Query: 257 LIARAVANET----GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDS 312
A+A+ E A ++ + K + L AF EA PS+I +D++D
Sbjct: 608 TFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDL 667
Query: 313 IA-----PKREKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNR-PNSIDPAL---R 362
IA P++E + V+ +R+ L ++ S ++ + AT++ S+ P+L +
Sbjct: 668 IAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFVSTGSLVALIATSQLQQSLHPSLVSAQ 727
Query: 363 RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSD-----DVDLERIAKDTHGYVGADLAA 417
F + P+ R E+L KN D D+DL+ IAKDT +V D
Sbjct: 728 GIHTFQCVQHLQPPNPEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTV 787
Query: 418 LCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP- 476
L + A+ + ED T+ T F+ AL P++LR + P
Sbjct: 788 L-VDRAIHSSLSRQHSSSREDLTL----------TTSDFQKALRGFLPASLRNVNLHKPR 836
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
++ W+ IGGL V++ L +T+Q P ++PE F + G+L YGPPG GKTLLA +A
Sbjct: 837 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 896
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E NFIS+KGPELL+ + G SE VR++F +A+ + PC+LFFDE +SIA
Sbjct: 897 RESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIA 947
Score = 48 (22.0 bits), Expect = 2.4e-49, Sum P(2) = 2.4e-49
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 437 EDETID--AEILNSMAVTDEHFKTALGTSNPS 466
EDE+++ I + A++ H TAL + PS
Sbjct: 1214 EDESLNQPGPIKTTFAISQAHLMTALAHTRPS 1245
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 103/236 (43%), Positives = 161/236 (68%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+ VGG+ Q+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG+GKTL+ARAVA+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHG--- 322
F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R E + G
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDS 293
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
EV+R ++ +LL +DG ++ ++ VI ATNR + +D AL R GR DR+I+ PDE R
Sbjct: 294 EVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARA 352
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++L+IH++ M L + +++IA+ G GA++ ++CTEA + +RE+ + ED
Sbjct: 353 QILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQED 408
Score = 300 (110.7 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 55/117 (47%), Positives = 81/117 (69%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V +VP+ +E +GGL+ +E++E ++ PV+HPE F+ G++ KGVL YGPPG GKTLL
Sbjct: 166 VEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLL 225
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
A+A+A+ + FI V G EL+ + GE VRE+F AR+ AP ++F DE+DSI +
Sbjct: 226 ARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS 282
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQED 366
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 112/246 (45%), Positives = 158/246 (64%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ + +V GV + ++ E+VE L+ + F+++G + PKGILL GPPG+GKTL+A+A+A
Sbjct: 156 ITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAG 214
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HG 322
E G FF I+G E + G S +R F++A+KNAP IIFIDEID++ +R G
Sbjct: 215 EAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGLGGG 274
Query: 323 EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
ER + ++Q+L MDG + VIVI ATNRP+ +DPAL R GRFDR + + PD GR
Sbjct: 275 HDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITGR 334
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--E 439
+L+IH K L+D V+LE +AK T G+ GADLA L EAA+ R+ V++ ED E
Sbjct: 335 EAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLEE 394
Query: 440 TIDAEI 445
+ID I
Sbjct: 395 SIDRVI 400
Score = 267 (99.0 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 47/117 (40%), Positives = 78/117 (66%)
Query: 473 VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA 532
++ P + + ++ G++ K+E+ E V++ ++ EKF+ G KG+L GPPG GKTLLA
Sbjct: 151 MDKPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLA 209
Query: 533 KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
KAIA E F S+ G E + M+ G + VR++FD+A+++APC++F DE+D++ Q
Sbjct: 210 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQ 266
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 125/328 (38%), Positives = 188/328 (57%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++DV GV + ++ E+++ L+ P+ F +G + PKG+LL GPPG+GKTL+ARAVA
Sbjct: 150 VTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAG 208
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HG 322
E G FF I+G + + G S +R F + +KNAP IIFIDEID++ R G
Sbjct: 209 EAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGG 268
Query: 323 EVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
ER + ++QLL MDG +S VI+I ATNRP+ +DPAL R GRFDR++ + PD GR
Sbjct: 269 HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGR 328
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--E 439
+L++HTK L+ DVDL IA+ T G+ GADL+ + EAAL R+ ++++D +
Sbjct: 329 EMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDD 388
Query: 440 TIDAEILN----SMAVTDEHFK-TALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
D ++ SM +++E K TA + + + + + V+ I + R L
Sbjct: 389 AKDKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSI--IPR-GRALG 445
Query: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYG 522
T+Q P+E + K + VL G
Sbjct: 446 VTMQLPIEDKHSYNKESLLNRIAVLMGG 473
Score = 263 (97.6 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 51/128 (39%), Positives = 79/128 (61%)
Query: 459 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 518
A G S L E V +ED+ G++ K EL+E +Q+ ++ P+KF K G KGV
Sbjct: 134 AFGKSRAKLLTEAQ---GRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGV 189
Query: 519 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 578
L GPPG GKTLLA+A+A E F S+ G + + M+ G + VR++F + +++APC++
Sbjct: 190 LLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCII 249
Query: 579 FFDELDSI 586
F DE+D++
Sbjct: 250 FIDEIDAV 257
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 494 (179.0 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 105/238 (44%), Positives = 150/238 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V +DDV G+ + ++ E+V+ L+H Q F +G K PKG LL G PG+GKTL+ARA+A
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTH 321
E FF I+G + + G S +R FE+ +K+AP IIF+DEID++ R
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 322 GEVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G ER + ++QLL MDG +S V++I ATNRP+ +DPAL R GRFDR++ I +PD G
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDING 332
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++ +H K + L+ DVDL IA+ T G+ GADLA L EAAL R ++ + D
Sbjct: 333 REKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCD 390
Score = 246 (91.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 45/109 (41%), Positives = 70/109 (64%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++D+ G+E K EL E V + ++H +KF K G KG L G PG GKTLLA+AIA
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAG 213
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E F S+ G + + M+ G + VR++F++ ++ APC++F DE+D++
Sbjct: 214 EANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAV 262
Score = 37 (18.1 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 509 KFGMSPSKGVLFYGPPGCGK--TLLAKAIANECQA 541
K+GMS S G L++ + T LA I +E ++
Sbjct: 512 KWGMSDSVGPLYHSDEAHERISTNLANLIDDEVKS 546
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 494 (179.0 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 105/238 (44%), Positives = 150/238 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V +DDV G+ + ++ E+V+ L+H Q F +G K PKG LL G PG+GKTL+ARA+A
Sbjct: 154 KVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIA 212
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTH 321
E FF I+G + + G S +R FE+ +K+AP IIF+DEID++ R
Sbjct: 213 GEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGG 272
Query: 322 GEVER-RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G ER + ++QLL MDG +S V++I ATNRP+ +DPAL R GRFDR++ I +PD G
Sbjct: 273 GNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDING 332
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++ +H K + L+ DVDL IA+ T G+ GADLA L EAAL R ++ + D
Sbjct: 333 REKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCD 390
Score = 246 (91.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 45/109 (41%), Positives = 70/109 (64%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V ++D+ G+E K EL E V + ++H +KF K G KG L G PG GKTLLA+AIA
Sbjct: 155 VTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAG 213
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
E F S+ G + + M+ G + VR++F++ ++ APC++F DE+D++
Sbjct: 214 EANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAV 262
Score = 37 (18.1 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 509 KFGMSPSKGVLFYGPPGCGK--TLLAKAIANECQA 541
K+GMS S G L++ + T LA I +E ++
Sbjct: 512 KWGMSDSVGPLYHSDEAHERISTNLANLIDDEVKS 546
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 102/252 (40%), Positives = 163/252 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+++ G+PD+ G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440
R + +IH ++M + D+ + +A+ GA++ ++CTEA + IR + V E +
Sbjct: 351 RSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVAT-EKDF 409
Query: 441 IDA--EILNSMA 450
++A +++ S A
Sbjct: 410 LEAVKKVIKSYA 421
Score = 308 (113.5 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 65/159 (40%), Positives = 91/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D +I M V + K + P + TV + P+V + D+GG +
Sbjct: 122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPEKF G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAI 280
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 20 VWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 80 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 135
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 136 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 181
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 182 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 360 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 419
Score = 296 (109.3 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 20 VWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 80 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 135
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 136 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 181
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 182 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 360 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 419
Score = 296 (109.3 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 136 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 195
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 196 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 255
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 256 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 315
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 316 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 372
Score = 286 (105.7 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 244
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Score = 286 (105.7 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 252
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 310 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 238
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 122 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 181
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 182 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 241
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 242 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 301
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 302 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 358
Score = 286 (105.7 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 230
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 106/237 (44%), Positives = 155/237 (65%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y ++GG+ +Q+ ++RE++ELPL +P+LF+ +G+ PPKG LLYGPPG+GKTL+ARAVA+
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
+ F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 263
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + +LL MDG + V +I ATNRP+++DPAL R GR DR+I I +P+E R
Sbjct: 264 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 323
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
L++L+IH + ++D E I K + G+ GADL +CTEA + IR D + ED
Sbjct: 324 LDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Score = 286 (105.7 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
NV++ +IGGL REL+E ++ P+ +PE F++ G+ P KG L YGPPG GKTLLA+A+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ NF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 252
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 107/238 (44%), Positives = 152/238 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ Y D+GG+ Q +IRE VELPL H QL+K IG+ PP+G+LL+GPPG GKT++A+AVA
Sbjct: 148 DISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVA 207
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
+ T A F + G E + K GE +R F A++N+PSIIFIDEID+IA KR +T
Sbjct: 208 HHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTG 267
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +RI+ +LL MDG ++ VI ATNR +++DPAL R GR DR+I++ +PD
Sbjct: 268 ADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQ 327
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
+ V T M + +DVDLE I AD+ A+C EA + +RE V++ +D
Sbjct: 328 KRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKD 385
Score = 304 (112.1 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 52/116 (44%), Positives = 85/116 (73%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E P++++ DIGGL+ K+E++E V+ P+ H + +++ G+ P +GVL +GPPGCGKT+LAK
Sbjct: 145 EKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAK 204
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A+ A+FI V G E + + GE VR++F A+Q++P ++F DE+D+IAT+
Sbjct: 205 AVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATK 260
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 27 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 86
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 87 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 142
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 143 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 188
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 189 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 246
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 247 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 306
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 307 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 366
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 367 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 426
Score = 296 (109.3 bits), Expect = 7.9e-24, P = 7.9e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 184 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 243
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 244 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 301
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 23 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 82
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 83 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 138
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 139 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 184
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 185 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 242
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 302
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 303 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 362
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 363 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 422
Score = 296 (109.3 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 297
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 20 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 79
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 80 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 135
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 136 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 181
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 182 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 239
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 240 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 299
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 300 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 359
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 360 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 419
Score = 296 (109.3 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 136/420 (32%), Positives = 221/420 (52%)
Query: 32 VVDEAINDDNSVVVLHPDTMEKLQFFR---GDTILIKGKKRKDTVCIALADDTCEE--PK 86
V DEA D VL T E +Q R + ++K + + T + D +E K
Sbjct: 23 VWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEK 82
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
I++NK + L + +++ V + G + + D +G + + + YF
Sbjct: 83 IKVNKTL-PYLVSNVIELLDVDPNDQEEDGANIDL---DSQRKGKCAVIKTSTRQTYFLP 138
Query: 147 AY-----RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENR 201
++ GDL G+ + ++ET P EY D+ + DE
Sbjct: 139 VIGLVDAEKLKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERP 184
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
++ Y D+GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA
Sbjct: 185 TEQ--YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 242
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---E 318
A +T A F + GP+++ G+ +R AF A++ APSIIFIDE+D+I KR E
Sbjct: 243 CAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSE 302
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDE 378
K +R + +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E
Sbjct: 303 KAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNE 362
Query: 379 VGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R +++IH++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 363 EARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 422
Score = 296 (109.3 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 297
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 107/234 (45%), Positives = 153/234 (65%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y +GG+ Q+ ++RE++ELPL +P+LF +G+ PPKG LLYGPPG+GKTL+ARAVA
Sbjct: 137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVA 196
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
++ A F + I+ K GES +R+ F A + P IIF+DEID+I +R E T
Sbjct: 197 SQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 256
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
+ E +R + +LL MDG S V +I ATNRP+S+DPAL R GR DR+I+I +P+E
Sbjct: 257 ADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQA 316
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
RLE+L+IH + ++D E I K + + GADL +CTEA L IR + + +
Sbjct: 317 RLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYV 370
Score = 275 (101.9 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 50/110 (45%), Positives = 76/110 (69%)
Query: 477 NVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 536
+V + IGGL + REL+E ++ P+ +PE F + G++P KG L YGPPG GKTLLA+A+A
Sbjct: 137 DVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVA 196
Query: 537 NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
++ ANF+ V ++ + GES +RE+F+ AR PC++F DE+D+I
Sbjct: 197 SQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAI 246
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 506 (183.2 bits), Expect = 4.3e-49, Sum P(2) = 4.3e-49
Identities = 105/232 (45%), Positives = 153/232 (65%)
Query: 201 RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAR 260
++ V +DD+GG+ +I + +++PL+HP+LF S G+K GIL YGPPG+GKTL+A+
Sbjct: 725 QIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAK 783
Query: 261 AVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--E 318
A+A FF + GPE+++ GESE+N+R+ F++A + P +IF DEIDS+APKR +
Sbjct: 784 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQ 843
Query: 319 KTHGEVERRIVSQLLTLMDGLKSRAH-VIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
G V RIVSQLL +DG+ + A V VIGATNRP+ +D AL R GRFD+ + +G+PD
Sbjct: 844 GDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPD 903
Query: 378 -EVGRLEVLRIHTKNMKLSDDVDLERIAK-DTHGYVGADLAALCTEAALQCI 427
+ +L +L T+ L +DV L +AK Y GAD ALC++A L +
Sbjct: 904 TDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955
Score = 446 (162.1 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 103/300 (34%), Positives = 166/300 (55%)
Query: 301 APSIIFIDEIDSIA----PKREKTHGEVERRIVSQLLTLMDGLKSR-AHVIVIGATNRPN 355
+P++IF+ +DSI ++ ++++ I ++ L+D + +G+ N +
Sbjct: 541 SPAVIFLAHLDSILLDVNANQDPEAIKLQKSINFEMSKLLDDFTFKFPGTTFVGSVNNID 600
Query: 356 SIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVD-------LERIAKDTH 408
++ + R RF EI + VP E RL + + + + +L+ DV ++ I+ +
Sbjct: 601 NVPSSFRSHMRF--EILVPVPSEAQRLRIFQWYLSSHELNRDVQQKVPVSYMDNISFSSL 658
Query: 409 GYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTS-NPSA 467
A L L ++ ++ R ++ + S+ +T E A + N +
Sbjct: 659 SSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLPQSILITQEDLSKATSKARNEFS 718
Query: 468 LRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 527
+ ++PNV W+DIGG++ VK E+ +T+ P++HPE F GM G+LFYGPPG G
Sbjct: 719 VSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTG 777
Query: 528 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KTL+AKAIA NF SVKGPELL M+ GESEANVR +F KAR++ PCV+FFDE+DS+A
Sbjct: 778 KTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVA 837
Score = 42 (19.8 bits), Expect = 4.3e-49, Sum P(2) = 4.3e-49
Identities = 31/146 (21%), Positives = 59/146 (40%)
Query: 37 INDDNSVVVL-HPDTMEKLQFFRGDTILIK--GKKRKDTVCIALADDTCEEPKIRMN-KV 92
INDDNS+ +T+ +L G I + G R + + L + ++ I K+
Sbjct: 225 INDDNSIYAFTDAETLLRLDVTSGSFITVSNMGCVRLVKLFVLLLPNGFKKRTIYAPPKI 284
Query: 93 VRSNLRVRLGDVVSVHQC----ADVKYGKRVHILPVDDTIEGVT--GNLFDAYLKPYFTE 146
+ S VV++ + D+ +V I V ++ N+ LK +F+E
Sbjct: 285 IASFPDC---SVVTISKSNIGHTDIPIANQVFISRVGGWLQSQKCFQNIILTTLKKFFSE 341
Query: 147 AYRPVRKGDLFLVRGGMRSVEFKVIE 172
+ R + + DL + + + E
Sbjct: 342 SKRILCQNDLIPIAFDSSMADLNIAE 367
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 103/252 (40%), Positives = 162/252 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R +L+IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 351 RTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 410
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 411 EAVN-KVIKSYA 421
Score = 310 (114.2 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 105/238 (44%), Positives = 152/238 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG + Q+ ++RE+VELPL P+ F ++G+ PPKGILLYGPPG+GKTL ARAVA
Sbjct: 205 DVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVA 264
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A IIF DEID++ R +
Sbjct: 265 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAG 324
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+T +DG R ++ V+ ATNRPN++DPAL R GR DR+++ +PD G
Sbjct: 325 GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 384
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R + RIH+K+M + + E I++ GA+L ++CTEA + IR + V +D
Sbjct: 385 RANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKD 442
Score = 304 (112.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 56/123 (45%), Positives = 80/123 (65%)
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+PS TV E P+V + D+GG ++ +L+E V+ P+ PE+F G+ P KG+L YGP
Sbjct: 192 DPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGP 251
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PG GKTL A+A+AN A FI V G EL+ + GE VRE+F+ AR C++FFDE+
Sbjct: 252 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 311
Query: 584 DSI 586
D++
Sbjct: 312 DAV 314
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 110/291 (37%), Positives = 173/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + ++ET P EY D+ + DE ++ Y D+
Sbjct: 91 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 134
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA A +T A F
Sbjct: 135 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 194
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERR 327
+ GP+++ G+ +R AF A++ APSIIFIDE+D+I KR EK +R
Sbjct: 195 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQR 254
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E R +++I
Sbjct: 255 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 314
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 315 HSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 365
Score = 296 (109.3 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 123 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 182
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 183 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 240
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 110/291 (37%), Positives = 173/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + ++ET P EY D+ + DE ++ Y D+
Sbjct: 95 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 138
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA A +T A F
Sbjct: 139 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 198
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERR 327
+ GP+++ G+ +R AF A++ APSIIFIDE+D+I KR EK +R
Sbjct: 199 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQR 258
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E R +++I
Sbjct: 259 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 318
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 319 HSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 369
Score = 296 (109.3 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 127 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 186
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 187 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 244
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 110/291 (37%), Positives = 173/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + ++ET P EY D+ + DE ++ Y D+
Sbjct: 103 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 146
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA A +T A F
Sbjct: 147 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 206
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERR 327
+ GP+++ G+ +R AF A++ APSIIFIDE+D+I KR EK +R
Sbjct: 207 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQR 266
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E R +++I
Sbjct: 267 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 326
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 327 HSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED 377
Score = 296 (109.3 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 135 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 194
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 195 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 252
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 492 (178.3 bits), Expect = 5.3e-49, Sum P(3) = 5.3e-49
Identities = 99/249 (39%), Positives = 160/249 (64%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++G+D +GG+ + + ++LP ++P+LF ++ ++ G+LLYGPPG+GKTL+A +A
Sbjct: 835 DLGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIA 894
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
E+G F + GPE++SK G SE +R F A+ P I+F DE +SIAP+R +
Sbjct: 895 RESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRGHDNTG 954
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR D+ + PD+ RLE
Sbjct: 955 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLE 1014
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ETI 441
+L + ++++ L+DDVDL+ +A T + GADL AL A L+ + ++ L+D +
Sbjct: 1015 ILNVLSESLPLADDVDLQHVASLTDSFTGADLKALLYGAQLEALHGRLLTGGLQDGGSSS 1074
Query: 442 DAEI-LNSM 449
D+++ L+SM
Sbjct: 1075 DSDLSLSSM 1083
Score = 458 (166.3 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 136/398 (34%), Positives = 202/398 (50%)
Query: 212 GVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFF 271
GV L+ PL QL + +LL G GSGK+ +A+A+ E AF
Sbjct: 562 GVSSMEHITHSLLGRPLSR-QLVSLVAGLRNGALLLTGGKGSGKSTLAKAICKE--AFDI 618
Query: 272 CINGPEIMS--KLAGESESNLRK----AFEEAEKNAPSIIFIDEID-----SIAPKREKT 320
EI+ L G+ N++K AF EA PS++ +D++D S P+ E +
Sbjct: 619 LDAHVEIIDCKALRGKRLENIQKTLAAAFSEALWRQPSVVLLDDLDLVVGRSALPEHEHS 678
Query: 321 HGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRP-NSIDPAL---RRFGRFDREIDIGV 375
++ +R+ L L+ S ++ + AT++ +S+ P L + F I
Sbjct: 679 PEAIQSQRLAHALNDLVKEFISMGSLVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQP 738
Query: 376 PDEVGRLEVLRIHTKN-----MKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREK 430
PD+ R E+L KN MK +DL+RIAK+T G+V D L + A+
Sbjct: 739 PDQDQRCEILHAIIKNKLDCDMKRFTGLDLQRIAKETEGFVARDFTML-VDRAIHSHLSH 797
Query: 431 MDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGGLENV 489
+V E+ + +T F+ AL P +LR + P ++ W+ IGGL +V
Sbjct: 798 QNVYTREE----------LVLTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDV 847
Query: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 549
++ L +T+Q P ++PE F + GVL YGPPG GKTLLA IA E NFISVKGP
Sbjct: 848 RQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGP 907
Query: 550 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
ELL+ + G SE VR++F +A+ + PC+LFFDE +SIA
Sbjct: 908 ELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIA 945
Score = 44 (20.5 bits), Expect = 5.3e-49, Sum P(3) = 5.3e-49
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 448 SMAVTDEHFKTALGTSNPS 466
S+A++ H TAL + PS
Sbjct: 1224 SLAISQSHLMTALSHTRPS 1242
Score = 39 (18.8 bits), Expect = 5.3e-49, Sum P(3) = 5.3e-49
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 168 FKVIETDPPEYCVVAPDTEIF 188
F+V ++ PP C A T +F
Sbjct: 286 FRVCKSQPPSMCK-ASATSVF 305
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 112/248 (45%), Positives = 154/248 (62%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
R DE ++ Y D+GG+ Q ++RE VELPL H +L++ IG+ PP+G+L+YGPPG GK
Sbjct: 151 RPDEK--PDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGK 208
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T++A+AVA T A F + G E + K GE +R F A++N+PSIIFIDEID+IA
Sbjct: 209 TMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIAT 268
Query: 316 KR--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
KR +T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR DR+I+
Sbjct: 269 KRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIE 328
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
+PD + V M LSDDVDLE GAD+ ++C EA +Q +RE
Sbjct: 329 FPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRY 388
Query: 433 VI---DLE 437
V+ DLE
Sbjct: 389 VVLTKDLE 396
Score = 304 (112.1 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 53/116 (45%), Positives = 84/116 (72%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
E P++++ DIGGL+ K+E++E V+ P+ H E +++ G+ P +GVL YGPPGCGKT+LAK
Sbjct: 154 EKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAK 213
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A+FI V G E + + GE VR++F A++++P ++F DE+D+IAT+
Sbjct: 214 AVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATK 269
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 110/291 (37%), Positives = 173/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + ++ET P EY D+ + DE ++ Y D+
Sbjct: 110 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 153
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA A +T A F
Sbjct: 154 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 213
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERR 327
+ GP+++ G+ +R AF A++ APSIIFIDE+D+I KR EK +R
Sbjct: 214 LKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQR 273
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E R +++I
Sbjct: 274 TMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 333
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M +S DV+ E +A+ T + GA A+C EA + +R + ED
Sbjct: 334 HSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHED 384
Score = 293 (108.2 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 55/118 (46%), Positives = 77/118 (65%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 142 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 201
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I +
Sbjct: 202 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNK 259
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 490 (177.5 bits), Expect = 8.5e-49, Sum P(2) = 8.5e-49
Identities = 100/249 (40%), Positives = 159/249 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++G+D +GG+ + + + ++LP ++P+LF ++ ++ GILLYGPPG+GKTL+A +A
Sbjct: 514 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIA 573
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
E+ F + GPE++SK G SE +R F A+ P I+F DE +SIAP+R +
Sbjct: 574 RESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG 633
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR D+ + PD+V RLE
Sbjct: 634 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 693
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED--ETI 441
+L + + ++ L+DDVDL+ +A T + GADL AL A L+ + + L+D +
Sbjct: 694 ILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSS 753
Query: 442 DAEI-LNSM 449
D+++ L+SM
Sbjct: 754 DSDLSLSSM 762
Score = 444 (161.4 bits), Expect = 7.1e-41, P = 7.1e-41
Identities = 130/402 (32%), Positives = 201/402 (50%)
Query: 210 VGGVRKQ-MAQIRELVELPLRHP---QLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
+GGV ++ + + L P QL + +LL G GSGK+ +A+A+ E
Sbjct: 234 LGGVNSLGVSSLEHITHSLLGRPLSRQLMSLVAGLRNGALLLTGGKGSGKSTLAKAICKE 293
Query: 266 T----GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA-----PK 316
A ++ + K + L AF EA PS++ +D++D IA P+
Sbjct: 294 AFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPE 353
Query: 317 REKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPN-SIDPAL---RRFGRFDREI 371
E + V+ +R+ L ++ S ++ + AT++ S+ P L + F
Sbjct: 354 HEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQSQQSLHPLLVSAQGVHIFQCVQ 413
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSD-----DVDLERIAKDTHGYVGADLAALCTEAALQC 426
I P++ R E+L KN D D+DL+ +AK+T G+V D L A
Sbjct: 414 HIQPPNQEQRCEILCNVIKNKLDCDINKFTDLDLQHVAKETGGFVARDFTVLVDRA---- 469
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVP-NVNWEDIGG 485
I + L ++I + +T F+ AL P++LR + P ++ W+ IGG
Sbjct: 470 IHSR-----LSRQSISTR--EKLVLTTLDFQKALRGFLPASLRSVNLHKPRDLGWDKIGG 522
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L V++ L +T+Q P ++PE F + G+L YGPPG GKTLLA IA E + NFIS
Sbjct: 523 LHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFIS 582
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
VKGPELL+ + G SE VR+IF +A+ + PC+LFFDE +SIA
Sbjct: 583 VKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIA 624
Score = 54 (24.1 bits), Expect = 8.5e-49, Sum P(2) = 8.5e-49
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 437 EDETID--AEILNSMAVTDEHFKTALGTSNPS 466
EDE+++ I +A++ H TALG + PS
Sbjct: 891 EDESMNQPGPIKTRLAISQSHLMTALGHTRPS 922
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 110/291 (37%), Positives = 174/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + +++T P EY D+ + DE ++ Y+D+
Sbjct: 129 LKPGDLV----GVNKDSYLILDTLPSEY-----DSRV-----KAMEVDEKPTED--YNDI 172
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+ +G++PPKG+LLYGPPG+GKTL+ARA A +T A F
Sbjct: 173 GGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 232
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-RR 327
+ GP+++ G+ +R AF A++ +P IIFIDEID+I KR + G+ E +R
Sbjct: 233 LKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 292
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG S + VI ATNR + +DPAL R GR DR+I+ P E R +L+I
Sbjct: 293 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQI 352
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M ++ DV+ E +A+ T + GA L A+C EA + +R ++ ED
Sbjct: 353 HSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 403
Score = 300 (110.7 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/118 (46%), Positives = 80/118 (67%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P ++ DIGGLE +EL E + P+ H E+FEK G+ P KGVL YGPPG GKTL+
Sbjct: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 220
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +PC++F DE+D+I T+
Sbjct: 221 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTK 278
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 103/236 (43%), Positives = 154/236 (65%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y D+GG+ Q+ +I+E VELPL HP+L++ +G+KPPKG++LYG PG+GKTL+A+AVAN+T
Sbjct: 190 YADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 249
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
A F + G E++ K G+ +R+ F AE+++PSI+FIDEID+I KR ER
Sbjct: 250 SATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAER 309
Query: 327 RI---VSQLLTLMDGLK-SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
I + +LL +DG S+ + VI ATNR + +DPAL R GR DR+I PDE +
Sbjct: 310 EIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKR 369
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
++ IHT M L +DV+LE + + GA++ A+ +EA L +RE+ + ++D
Sbjct: 370 KIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDD 425
Score = 296 (109.3 bits), Expect = 8.2e-24, P = 8.2e-24
Identities = 52/116 (44%), Positives = 81/116 (69%)
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
+ P ++ DIGGLE+ +E++E V+ P+ HPE +E+ G+ P KGV+ YG PG GKTLLAK
Sbjct: 184 KAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 243
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+AN+ A F+ V G EL+ + G+ VR++F+ A + +P ++F DE+D+I T+
Sbjct: 244 AVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTK 299
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 126/348 (36%), Positives = 197/348 (56%)
Query: 118 RVHILPVDD--TIEGVTGNLFDAYLKPYFTEAYRPV-RKGDLFLVR-GGMRSVEFKVIET 173
RVH L D+ + V G+ + Y+ P + + + R L +V+ GGM FK +
Sbjct: 101 RVHELFDDEKHAVVVVEGSRREWYV-PILSIVDKDLLRLNALVMVKAGGM----FKTV-- 153
Query: 174 DPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQL 233
P V D +I + + + E E +DD+GG Q+ +++E VELPL HP+
Sbjct: 154 --PSAIVGVLDDKI--DSNAMGHKVEKTPKET-FDDIGGCESQIQELKESVELPLTHPEY 208
Query: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293
++ +G+ PKG++LYG PG+GKTL+A+AVAN T A F G +++ K +GE +R+
Sbjct: 209 YEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQI 268
Query: 294 FEEAEKNAPSIIFIDEIDSIAPKREKT--HGEVE-RRIVSQLLTLMDGLKSRAHVIVIGA 350
F+ A++ APSI+FIDEID++ KR T GE E +R + +LL +DG +SR V +I A
Sbjct: 269 FQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMA 328
Query: 351 TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGY 410
TNR +S+DPAL R GR DR+I++ PDE R ++ IHT M + V E +
Sbjct: 329 TNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSI 388
Query: 411 VGADLAALCTEAALQCIREKMDVIDLED--ETIDAEILNSMAVTDEHF 456
GA++ A+CTEA + +R + + +D + + + +L+ E F
Sbjct: 389 SGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVKSVMLSKKGGAPEGF 436
Score = 290 (107.1 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 54/124 (43%), Positives = 82/124 (66%)
Query: 466 SALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
+A+ V + P ++DIGG E+ +EL+E+V+ P+ HPE +E+ G++ KGV+ YG PG
Sbjct: 168 NAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPG 227
Query: 526 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585
GKTLLAKA+AN A FI G +L+ GE VR+IF A++ AP ++F DE+D+
Sbjct: 228 TGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDA 287
Query: 586 IATQ 589
+ T+
Sbjct: 288 VGTK 291
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 103/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + V +D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFL 410
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 411 EAVN-KVIKSYA 421
Score = 310 (114.2 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 109/291 (37%), Positives = 173/291 (59%)
Query: 151 VRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDV 210
++ GDL G+ + ++ET P EY D+ + DE ++ Y D+
Sbjct: 133 LKPGDLV----GVNKDSYLILETLPTEY-----DSRV-----KAMEVDERPTEQ--YSDI 176
Query: 211 GGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFF 270
GG+ KQ+ ++ E + LP+ H + F+++G++PPKG+L+YGPPG+GKTL+ARA A +T A F
Sbjct: 177 GGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATF 236
Query: 271 FCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERR 327
+ GP+++ G+ +R AF A++ APSIIFIDE+D+I KR EK +R
Sbjct: 237 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQR 296
Query: 328 IVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRI 387
+ +LL +DG + V VI ATNR + +DPAL R GR DR+I+ +P+E R +++I
Sbjct: 297 TMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQI 356
Query: 388 HTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
H++ M + DV+ E +A+ T + GA A+C EA + +R ++ ED
Sbjct: 357 HSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHED 407
Score = 296 (109.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 56/118 (47%), Positives = 78/118 (66%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P + DIGGL+ +EL E + P+ H EKFE G+ P KGVL YGPPG GKTLL
Sbjct: 165 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 224
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
A+A A + +A F+ + GP+L+ M+ G+ VR+ F A++ AP ++F DELD+I T+
Sbjct: 225 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 282
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 102/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 162 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 221
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 222 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 281
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 282 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 341
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 342 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 401
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 402 EAVN-KVIKSYA 412
Score = 310 (114.2 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 113 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 172
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 173 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 232
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 233 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 271
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 102/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 170 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 229
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 230 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 289
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 290 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 349
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 350 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 409
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 410 EAVN-KVIKSYA 420
Score = 310 (114.2 bits), Expect = 5.8e-26, P = 5.8e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 240
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 279
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 102/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 410
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 411 EAVN-KVIKSYA 421
Score = 310 (114.2 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 102/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 410
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 411 EAVN-KVIKSYA 421
Score = 310 (114.2 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 102/252 (40%), Positives = 161/252 (63%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y DVGG ++Q+ ++RE+VE PL HP+ F ++G++PPKG+LL+GPPG+GKTL ARAVA
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTH 321
N T A F + G E++ K GE +R+ FE A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR DR+I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED-- 438
R + +IH ++M + D+ E +A+ GA++ ++CTEA + IR + + +D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFL 410
Query: 439 ETIDAEILNSMA 450
E ++ +++ S A
Sbjct: 411 EAVN-KVIKSYA 421
Score = 310 (114.2 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 65/159 (40%), Positives = 92/159 (57%)
Query: 433 VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVV-----EVPNVNWEDIGGLE 487
V+DL D+ +I M V + K + P + TV E P+V + D+GG +
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
+L+E V+ P+ HPE+F G+ P KGVL +GPPG GKTL A+A+AN A FI V
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
G EL+ + GE VRE+F+ AR C++FFDE+D+I
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
WARNING: HSPs involving 491 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.137 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 590 590 0.00083 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 741
No. of states in DFA: 616 (65 KB)
Total size of DFA: 304 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.43u 0.15s 52.58t Elapsed: 00:00:02
Total cpu time: 52.50u 0.16s 52.66t Elapsed: 00:00:02
Start: Fri May 10 16:25:23 2013 End: Fri May 10 16:25:25 2013
WARNINGS ISSUED: 2