BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007764
(590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 1163 bits (3009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/589 (95%), Positives = 576/589 (97%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
MS Q ESSD K K+DFSTAILERKK+PNRLVVDEA+NDDNSVV +HP TMEKLQ FRGD
Sbjct: 1 MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGD 60
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDT+CIALAD+ CEEPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61 TILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILP+DDTIEGVTGNLFDA+LKPYF EAYRPVRKGDLFLVRGGMRSVEFKV+ETDP EYCV
Sbjct: 121 ILPIDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCV 180
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEP++REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 181 VAPDTEIFCEGEPLKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
Sbjct: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
Sbjct: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDLEDETIDAE+LNSMAVT+EHF+TALGTSNPSALRETVVEVPNV+W
Sbjct: 421 EAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW 480
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 155/231 (67%), Gaps = 3/231 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+
Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA 597
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+++QLLT MDG+ ++ V +IGATNRP+ IDPAL R GR D+ I I +PDE R
Sbjct: 598 GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
++ + + ++ +VDL +A+ T G+ GAD+ +C A IRE ++
Sbjct: 658 HQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRACKYAIRENIE 708
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/589 (93%), Positives = 579/589 (98%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
M+NQAESSD+KGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV LHPDTMEKLQ FRGD
Sbjct: 1 MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61 TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILP+DDTIEGV+GN+FDAYLKPYF EAYRPVRKGDLFLVRGGMRS+EFKVIETDP EYCV
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCV 180
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEP++REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 181 VAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 360
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLER++KDTHGYVGADLAALCT
Sbjct: 361 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCT 420
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDL+DE IDAEILNSMAV+++HF+TALG SNPSALRETVVEVPNV+W
Sbjct: 421 EAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSW 480
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFIS+KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 541 ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 161/243 (66%), Gaps = 4/243 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F I GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+++QLLT MDG+ ++ V +IGATNRP+ IDPAL R GR D+ I I +PDE R
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 657
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
++ + + ++ DVDL +AK T G+ GAD+ +C + IRE ++ D+E E
Sbjct: 658 YQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEK-DIEKERK 716
Query: 442 DAE 444
AE
Sbjct: 717 RAE 719
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 1155 bits (2988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/589 (94%), Positives = 578/589 (98%), Gaps = 1/589 (0%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
MSN+ ESSD+K TK+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct: 1 MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 59
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct: 120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEPV+REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 180 VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 239
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKT+GEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 300 APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 359
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLERI+KDTHGYVGADLAALCT
Sbjct: 360 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT 419
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDLED++IDAEILNSMAV++EHF TALG SNPSALRETVVEVPNV+W
Sbjct: 420 EAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSW 479
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 480 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 539
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 540 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 159/238 (66%), Gaps = 4/238 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+++QLLT MDG+ ++ V +IGATNRP+ ID AL R GR D+ I I +PDE R
Sbjct: 597 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSR 656
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
L + + + ++ DVD+ +AK T G+ GAD+ +C A IRE ++ D+E+E
Sbjct: 657 LNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEK-DIENE 713
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/589 (94%), Positives = 576/589 (97%), Gaps = 1/589 (0%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
MS AESSD+K +K+DFSTAILERKK+PNRLVVDEAINDDNSVV LHP TMEKLQ FRGD
Sbjct: 1 MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 59
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTVCIALAD+TCEEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 60 TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 119
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILPVDDT+EGVTGNLFDAYLKPYF EAYRPVRKGDLFLVRGGMRSVEFKVIETDP EYCV
Sbjct: 120 ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV 179
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEPV+REDE RLD+VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 180 VAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 239
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 240 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 299
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKT+GEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 300 APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 359
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDE+GRLEVLRIHTKNMKL++DVDLERI+KDTHGYVGADLAALCT
Sbjct: 360 LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT 419
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDVIDLED++IDAEILNSMAVT+EHF TALG SNPSALRETVVEVPNV+W
Sbjct: 420 EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSW 479
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 480 NDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 539
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 540 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 156/239 (65%), Gaps = 5/239 (2%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ +++E V+ P+ HP+ F+ G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR----EKT 320
E A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA +R
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596
Query: 321 HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G R+++QLLT MDG+ ++ V +IGATNRP+ ID AL R GR D+ I I +PDE
Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
RL + + + ++ DVD+ +AK T G+ GAD+ +C A IRE ++ D+E E
Sbjct: 657 RLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEK-DIEKE 714
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/589 (93%), Positives = 575/589 (97%)
Query: 1 MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60
M++QAESSD+K K+DFSTAILERKKA NRLVVDEA+NDDNSVV LHP TMEKLQ FRGD
Sbjct: 1 MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGD 60
Query: 61 TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
TILIKGKKRKDTV IALAD+TC+EPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61 TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120
Query: 121 ILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV 180
ILP+DDTIEG+TG+LFDA+LKPYF EAYRP+RKGD FLVRGGMRSVEFKVIETDP EYCV
Sbjct: 121 ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV 180
Query: 181 VAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
VAPDTEIFCEGEPV+REDE RLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
Sbjct: 181 VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK 240
Query: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
Sbjct: 241 PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN 300
Query: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA 360
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIV+GATNRPNSIDPA
Sbjct: 301 APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA 360
Query: 361 LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT 420
LRRFGRFDREIDIGVPDEVGRLEVL IHTKNMKL+++VDLERI+KDTHGYVGADLAALCT
Sbjct: 361 LRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT 420
Query: 421 EAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNW 480
EAALQCIREKMDV+DLED+TIDAE+LNSMAVT+EHF+TALGTSNPSALRETVVEVPNV+W
Sbjct: 421 EAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW 480
Query: 481 EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
EDIGGLENVKRELQETVQYPVE PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
Sbjct: 481 EDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ 540
Query: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
Sbjct: 541 ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 169/277 (61%), Gaps = 23/277 (8%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ +++E V+ P+ P+ F+ G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F + GPE+++ GESE+N+R+ F++A ++AP ++F DE+DSIA +R + G+
Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDA 597
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+++QLLT MDG+ ++ V +IGATNRP+ IDPAL R GR D+ I I +PDE R
Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
++ + + LS D+DL +AK T G+ GAD+ +C A IRE ++ D+E E
Sbjct: 658 HQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEK-DIEREKR 716
Query: 442 DAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
E NP ++ E V EVP +
Sbjct: 717 RQE-------------------NPDSMDEDVDEVPEI 734
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 1003 bits (2592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/582 (80%), Positives = 536/582 (92%), Gaps = 1/582 (0%)
Query: 7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
+S + D STAIL++K PNRL+VDE+IN+DNSVV L M++LQ FRGDT+L+KG
Sbjct: 2 ASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKG 61
Query: 67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
KKR++TVCI L+DDTC + K+RMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+DD
Sbjct: 62 KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD 121
Query: 127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
T+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPDT
Sbjct: 122 TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTV 181
Query: 187 IFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 245
I CEGEP++REDE L+EVGYDD+GGVRKQ+AQI+E+VELPLRHP LFK+IGVKPP+GI
Sbjct: 182 IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI 241
Query: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305
LLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+II
Sbjct: 242 LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII 301
Query: 306 FIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFG 365
FIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRRFG
Sbjct: 302 FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 361
Query: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
RFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAALQ
Sbjct: 362 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 421
Query: 426 CIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG 485
IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVPN+ WEDIGG
Sbjct: 422 AIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGG 481
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L++VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANFIS
Sbjct: 482 LDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 541
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 542 IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GKTL+A+A+AN
Sbjct: 474 ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA R G+
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDG 593
Query: 325 ER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+++Q+LT MDG+ S+ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE R
Sbjct: 594 GGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
+ +L+ + + +S DVDL+ +AK T+G+ GADL +C A IRE
Sbjct: 654 IAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/584 (80%), Positives = 536/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/584 (80%), Positives = 536/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 1001 bits (2589), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/584 (80%), Positives = 536/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/584 (80%), Positives = 535/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD+K D STAIL++K PNRL+VDE+IN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGSDSKSD--DLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKLSDDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 158/237 (66%), Gaps = 3/237 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE 429
I +PDE R+ +L+ + + ++ DVDL+ +AK T+G+ GADL +C A IRE
Sbjct: 645 IPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 1000 bits (2586), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/584 (80%), Positives = 534/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A SD K D STAIL++K PNRL+VDE+IN+DNS+V L M++LQ FRGDT+L+
Sbjct: 2 ASGSDTKSD--DLSTAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRVRLGDV+S+ C DVKYGKRVH+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKLSDDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 159/240 (66%), Gaps = 3/240 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ + +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
I +PDE R+ +L+ + + ++ DVD++ +AK T+G+ GADL +C A IRE ++
Sbjct: 645 IPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIE 704
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/584 (80%), Positives = 535/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQE VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ +++ELV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/584 (80%), Positives = 535/584 (91%), Gaps = 3/584 (0%)
Query: 5 AESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
A +D+KG D STAIL++K PNRL+VDEAIN+DNSVV L M++LQ FRGDT+L+
Sbjct: 2 ASGADSKGD--DLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLL 59
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
KGKKR++ VCI L+DDTC + KIRMN+VVR+NLRV LGDV+S+ C DVKYGKR+H+LP+
Sbjct: 60 KGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPI 119
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DDT+EG+TGNLF+ YLKPYF EAYRP+RKGD+FLVRGGMR+VEFKV+ETDP YC+VAPD
Sbjct: 120 DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPD 179
Query: 185 TEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I CEGEP++REDE L+EVGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+
Sbjct: 180 TVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GILLYGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKNAP+
Sbjct: 240 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA 299
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDE+D+IAPKREKTHGEVERRIVSQLLTLMDGLK RAHVIV+ ATNRPNSIDPALRR
Sbjct: 300 IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR 359
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L+IHTKNMKL+DDVDLE++A +THG+VGADLAALC+EAA
Sbjct: 360 FGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAA 419
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
LQ IR+KMD+IDLEDETIDAE++NS+AVT + F+ AL SNPSALRETVVEVP V WEDI
Sbjct: 420 LQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDI 479
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE+VKRELQ+ VQYPVEHP+KF KFGM+PSKGVLFYGPPGCGKTLLAKAIANECQANF
Sbjct: 480 GGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF 539
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IS+KGPELLTMWFGESEANVREIFDKARQ+APCVLFFDELDSIA
Sbjct: 540 ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 155/230 (67%), Gaps = 3/230 (1%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ ++++LV+ P+ HP F G+ P KG+L YGPPG GK
Sbjct: 465 RETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 524
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + AP ++F DE+DSIA
Sbjct: 525 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 584
Query: 316 KREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
R G+ R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 585 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
I +PDE R+ +L+ + + ++ DVDLE +AK T+G+ GADL +C A
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 694
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/581 (76%), Positives = 517/581 (88%), Gaps = 3/581 (0%)
Query: 8 SDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGK 67
+D+KG D +TAIL+RK PNRL+V+EA NDDNSVV L M++LQ FRGDT+++KGK
Sbjct: 2 ADSKG--EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59
Query: 68 KRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDT 127
+RK+TVCI L+DDTC + KIRMN+VVR+NL V L DVVSV C DVKYGKRV ILP+D++
Sbjct: 60 RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119
Query: 128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEI 187
EGVTGNLF+ YLKPYF EAYRP+ GD F+VR MR +EFKV+ TDP YC+VAP+T I
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179
Query: 188 FCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGIL 246
FC+G+P++RE+E L+ VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GIL
Sbjct: 180 FCDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL 239
Query: 247 LYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIF 306
+YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEAEKN+P+IIF
Sbjct: 240 MYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIF 299
Query: 307 IDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGR 366
IDEID+IAPKR+KTHGEVERRIVSQLLTLMDG+K +H+IV+ ATNRPNSIDPALRRFGR
Sbjct: 300 IDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGR 359
Query: 367 FDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQC 426
FDREIDIG+PD GRLEVLRIHTKNMKL DDVDLE+IA ++HG+VGADLA+LC+EAALQ
Sbjct: 360 FDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQ 419
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGL 486
IREKMD+IDLED+ IDAE+L S+AVT E+F+ A+ S+PSALRETVVEVPN W DIGGL
Sbjct: 420 IREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGL 479
Query: 487 ENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISV 546
E+VK+ELQE VQYPVEHP+KF KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISV
Sbjct: 480 ESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISV 539
Query: 547 KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KGPELLTMWFGESEANVR+IFDKAR +APCVLFFDELDSIA
Sbjct: 540 KGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIA 580
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 164/267 (61%), Gaps = 14/267 (5%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG+ +++ELV+ P+ HP F G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 473 WTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 532
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE--- 323
A F + GPE+++ GESE+N+R F++A AP ++F DE+DSIA R G+
Sbjct: 533 QANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGG 592
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PD+ R
Sbjct: 593 AADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREA 652
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443
+L+ + + L+ +VDL IAK T G+ GADL +C A IR+ ++ ++ E A
Sbjct: 653 ILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEA-EIRREKERA 711
Query: 444 EILNSMAVTDE----------HFKTAL 460
E NS DE HF+ A+
Sbjct: 712 ENQNSAMDMDEDDPVPEITSAHFEEAM 738
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/585 (73%), Positives = 517/585 (88%), Gaps = 6/585 (1%)
Query: 9 DAKGTKR----DFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILI 64
DA G ++ D STAIL++KK PN L+V +A+NDDNS + L +TM+ L FRGDT+ +
Sbjct: 21 DASGAEKKEELDTSTAILKKKKKPNSLIVTDAVNDDNSTISLSNNTMDTLGLFRGDTVTV 80
Query: 65 KGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPV 124
+GKKRK+TV I LADD ++ R+N+VVR NLRV+ GD+++VH C D+KY KR+ +LP+
Sbjct: 81 RGKKRKETVLIVLADDDLDDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPI 140
Query: 125 DDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPD 184
DT+EG+TG+LFD YL PYF + YRPV++GDLF VRGGMR VEFKV+E DPPE+ +VAPD
Sbjct: 141 ADTVEGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPD 200
Query: 185 TEIFCEGEPVRRED-ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK 243
T I EGEP++RED EN L+EVGYDD+GG RKQMAQIRELVELPLRHPQLFKSIG+KPP+
Sbjct: 201 TIIHSEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPR 260
Query: 244 GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS 303
GIL+YGPPG+GKTL+ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+P+
Sbjct: 261 GILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPA 320
Query: 304 IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR 363
IIFIDEIDSIAPKREKT+GEVERR+VSQLLTLMDG+K+R++V+V+ ATNRPNSIDPALRR
Sbjct: 321 IIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRR 380
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
FGRFDRE+DIG+PD GRLE+L IHTKNMKL +DVDLE IA +THGYVG+DLA+LC+EAA
Sbjct: 381 FGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAA 440
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE-TVVEVPNVNWED 482
+Q IREKMD+IDL+++TIDAE+L+S+ VT E+F+ ALG SNPSALRE VVEVPNV WED
Sbjct: 441 MQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWED 500
Query: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
IGGLE VKREL E+VQYPV+HPEKF+KFG+SPS+GVLFYGPPG GKT+LAKA+ANEC AN
Sbjct: 501 IGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN 560
Query: 543 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
FISVKGPELL+MWFGESE+N+R+IFDKAR +APCV+F DELDSIA
Sbjct: 561 FISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIA 605
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 150/230 (65%), Gaps = 3/230 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ + ++ E V+ P+ HP+ F+ G+ P +G+L YGPPG+GKT++A+AVAN
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F + GPE++S GESESN+R F++A AP ++F+DE+DSIA R + G+
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDA 615
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+V+QLLT MDG+ S+ +V VIGATNRP +D AL R GR D + + +PD+ R
Sbjct: 616 GGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASR 675
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
+L+ + ++ DVD+E IA THG+ GADL + A I+E +
Sbjct: 676 EGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKESI 725
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/589 (74%), Positives = 519/589 (88%), Gaps = 3/589 (0%)
Query: 1 MSNQAESSDAKGTKRD-FSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRG 59
M++ D K K D +TAIL+ KK PNRL++D++ NDDNS+V+L M++L FRG
Sbjct: 1 MASVPTQRDEKEKKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRG 60
Query: 60 DTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 119
D++++KGKKR++TV I L D C KI+MNKVVR+NLR RLGDVVS+ A ++YGKRV
Sbjct: 61 DSVILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSI-SSAQLEYGKRV 119
Query: 120 HILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYC 179
H+LP+DDTIEG+TGNLFD +L+PYFT+AYRPV KGD+F V+ MR+VEFKV+ETDP C
Sbjct: 120 HVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPAC 179
Query: 180 VVAPDTEIFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG 238
+VAPDT I EG+P++RE+E L+EVGYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG
Sbjct: 180 IVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIG 239
Query: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE 298
VKPP+GILL+GPPG+GKTLIARAVANETGAFFF INGPEIMSK++GESESNLRKAF E E
Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECE 299
Query: 299 KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID 358
KN+P+I+FIDEID+IAPKREK HGEVE+RIVSQLLTLMDGLK+RAHV+VI ATNRPNSID
Sbjct: 300 KNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSID 359
Query: 359 PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAAL 418
ALRRFGRFDREIDIG+PD VGRLE+LRIHTKNMKL +DVDLE++A + HG+VGADLA+L
Sbjct: 360 GALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASL 419
Query: 419 CTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV 478
C+EAA+Q IREKM++IDLED+TIDAE+LNS+AVT E+F+ A+G S+PSALRE VVE PN
Sbjct: 420 CSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNT 479
Query: 479 NWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE 538
W DIGGL+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANE
Sbjct: 480 TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANE 539
Query: 539 CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
CQANFIS+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSIA
Sbjct: 540 CQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/229 (43%), Positives = 154/229 (67%), Gaps = 3/229 (1%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 481 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 540
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE--- 323
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R + G+
Sbjct: 541 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGG 600
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE RL+
Sbjct: 601 AADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQ 660
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMD 432
+ + + LS D+DL +AK+T G+ GADL +C A IRE ++
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIE 709
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/576 (73%), Positives = 514/576 (89%), Gaps = 1/576 (0%)
Query: 13 TKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDT 72
+ D +TAIL +K+ PN LVVD+A NDDNSV+ L +TME LQ FRGDT+++KGK+RKDT
Sbjct: 28 SAEDTATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDT 87
Query: 73 VCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVT 132
V I L D+ E+ R+N+VVR+NLRVRLGD+V+++ C D+KY +R+ +LP+ DT+EG+T
Sbjct: 88 VLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGLT 147
Query: 133 GNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGE 192
G+LFD YLKPYF EAYRP+RKGDLF+VRG MR VEFKV++ P E+ +V+ DT I EGE
Sbjct: 148 GSLFDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIHWEGE 207
Query: 193 PVRREDE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPP 251
P+ REDE + L EVGYDD+GG R+QMAQIRELVELPLRHPQLFKSIG+KPP+GIL+YGPP
Sbjct: 208 PINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPP 267
Query: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
G+GKTL+ARAVANETGAFFF INGPEIMSK+AGESESNLRKAFEEAEKN+P+IIFIDEID
Sbjct: 268 GTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEID 327
Query: 312 SIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
SIAPKREKT+GEVERR+VSQLLTLMDG+K+R++V+V+ ATNRPNSIDPALRRFGRFDRE+
Sbjct: 328 SIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREV 387
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
D+G+PD GRLE+LRIHTKNMKL+DDVDLE+IA +THGYVG+DLA+LC+EAA+Q IREKM
Sbjct: 388 DVGIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKM 447
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
D+IDL+++ IDAE+L+S+ VT ++F+ ALG+SNPSALRETVVEVPNV WEDIGGLE VKR
Sbjct: 448 DMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKR 507
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
EL+ETVQ PV + EKF +FG++PSKGVLF+GPPG GKTLLAKAIANEC ANFISVKGPEL
Sbjct: 508 ELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPEL 567
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
L+MWFGESE+NVR+IFDKAR +APCV+F DELDSIA
Sbjct: 568 LSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIA 603
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 160/242 (66%), Gaps = 3/242 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ + ++RE V++P+ + + F GV P KG+L +GPPG+GKTL+A+A+AN
Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
E A F + GPE++S GESESN+R F++A AP ++F+DE+DSIA R
Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
R+V+QLLT MDG+ S+ +V VIGATNRP+ IDPAL R GR D+ I + +PDE R
Sbjct: 614 GGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARF 673
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV-IDLEDETI 441
+L+ ++ +++DVDL +AK THG+ GADL + A I++ ++ I E+ET
Sbjct: 674 SILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETG 733
Query: 442 DA 443
+A
Sbjct: 734 EA 735
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/571 (73%), Positives = 509/571 (89%), Gaps = 1/571 (0%)
Query: 18 STAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIAL 77
+TAIL RKK N L+VD+AINDDNSV+ ++ +TM+KL+ FRGDT+L+KGKKRKDTV I L
Sbjct: 23 ATAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVL 82
Query: 78 ADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFD 137
DD E+ R+N+VVR+NLR+RLGD+V++H C D+KY R+ +LP+ DTIEG+TGNLFD
Sbjct: 83 IDDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFD 142
Query: 138 AYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRRE 197
+LKPYF EAYRPVRKGD F+VRGGMR VEFKV++ +P EY VVA DT I EGEP+ RE
Sbjct: 143 VFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINRE 202
Query: 198 DE-NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKT 256
DE N ++EVGYDD+GG RKQMAQIRE+VELPLRHPQLFK+IG+KPP+G+L+YGPPG+GKT
Sbjct: 203 DEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKT 262
Query: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
L+ARAVANETGAFFF INGPE+MSK+AGESESNLRKAFEEAEKNAP+IIFIDEIDSIAPK
Sbjct: 263 LMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPK 322
Query: 317 REKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
R+KT+GEVERR+VSQLLTLMDG+K+R++V+VI ATNRPNSIDPALRRFGRFDRE+DIG+P
Sbjct: 323 RDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIP 382
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
D GRLEVLRIHTKNMKL+DDVDLE +A +THGYVGAD+A+LC+EAA+Q IREKMD+IDL
Sbjct: 383 DATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDL 442
Query: 437 EDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQET 496
+++ IDAE+L+S+ VT ++F+ ALG SNPSALRETVVE NV W+D+GGL+ +K EL+ET
Sbjct: 443 DEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKET 502
Query: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 556
V+YPV HP+++ KFG+SPSKGVLFYGPPG GKTLLAKA+A E ANFISVKGPELL+MW+
Sbjct: 503 VEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWY 562
Query: 557 GESEANVREIFDKARQSAPCVLFFDELDSIA 587
GESE+N+R+IFDKAR +AP V+F DELDSIA
Sbjct: 563 GESESNIRDIFDKARAAAPTVVFLDELDSIA 593
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 169/285 (59%), Gaps = 23/285 (8%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DDVGG+ + +++E VE P+ HP + G+ P KG+L YGPPG+GKTL+A+AVA
Sbjct: 484 VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVAT 543
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F + GPE++S GESESN+R F++A AP+++F+DE+DSIA R + G+
Sbjct: 544 EVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDA 603
Query: 324 --VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
R+V+QLLT MDG+ ++ +V VIGATNRP+ IDPA+ R GR D+ I + +PDE R
Sbjct: 604 GGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENAR 663
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV-------- 433
L +L + L ++L IAK T G+ GADL + AA I++ ++
Sbjct: 664 LSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEK 723
Query: 434 --------IDLEDETIDAEILNSM----AVTDEHFKTALGTSNPS 466
+++ DE AE + +T EHF A+ T+ S
Sbjct: 724 EVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRS 768
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/581 (71%), Positives = 511/581 (87%), Gaps = 1/581 (0%)
Query: 7 SSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKG 66
S+ + + STAIL+ K PNRL+VD++ DDNSV+ + M++L FRGD +++KG
Sbjct: 8 QSEKEKKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKG 67
Query: 67 KKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDD 126
KKRK++V I ++D++C K+RMN+VVR+NLR+RLGDVVS+ ++ YG R+H+LP+DD
Sbjct: 68 KKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDD 127
Query: 127 TIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTE 186
TIEG+TGNLFD +LKPYF EAYRP+ KGD+F V+ MR+VEFKV+ET+P C+V+PDT
Sbjct: 128 TIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTM 187
Query: 187 IFCEGEPVRREDENR-LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 245
I EG+P++RE+E ++++GYDD+GGVRKQ+AQI+E+VELPLRHPQLFK+IG+KPP+GI
Sbjct: 188 IHYEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGI 247
Query: 246 LLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSII 305
LL+GPPG+GKTLIARAVANETG+FFF INGPE+MSK++GESESNLRKAFEE EKN P+I+
Sbjct: 248 LLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAIL 307
Query: 306 FIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFG 365
FIDEID+IAPKREKT+GEVERRIVSQLLTLMDG+K R++++VI ATNRPNSID ALRRFG
Sbjct: 308 FIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFG 367
Query: 366 RFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQ 425
RFDREIDIG+PD VGRLE+LRIHTKNMKL+DDVDLE+IA + HG+VGADLA+LC+EAALQ
Sbjct: 368 RFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQ 427
Query: 426 CIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGG 485
IREKM++IDLED+ IDAE+LNS+AVT E+F+ A G S+PSALRE VVE PN W DIGG
Sbjct: 428 QIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGG 487
Query: 486 LENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFIS 545
L+NVKRELQE VQYPVEHPEK+ KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFIS
Sbjct: 488 LQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFIS 547
Query: 546 VKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
+KGPELLTMWFGESEANVR++FDKAR +APCVLFFDELDSI
Sbjct: 548 IKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSI 588
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 168/270 (62%), Gaps = 16/270 (5%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D+GG++ +++ELV+ P+ HP+ + G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 482 WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC 541
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
A F I GPE+++ GESE+N+R F++A AP ++F DE+DSIA R G
Sbjct: 542 QANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGG 601
Query: 327 ----RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
R+++Q+LT MDG+ ++ +V +IGATNRP+ IDPA+ R GR D+ I I +PDE R
Sbjct: 602 GASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRH 661
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDV-IDLEDETI 441
++L+ + LS D+DL +AK+T G+ GADL +C A IRE ++ I +E E
Sbjct: 662 QILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQ 721
Query: 442 D-----AEILNSMAV------TDEHFKTAL 460
D E++ AV T HF+ A+
Sbjct: 722 DRQARGEELMEDDAVDPVPEITRAHFEEAM 751
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/585 (60%), Positives = 454/585 (77%), Gaps = 7/585 (1%)
Query: 10 AKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVV-LHPDTMEKLQFFRGDTILIKGKK 68
A ++DFSTAILE K +V D+ + + V LHP T+ +L+ F D + I GKK
Sbjct: 3 AAANEKDFSTAILESKTKNTLIVCDKDCSKLRTYQVGLHPTTLNELELFESDYVRILGKK 62
Query: 69 RKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQC-ADVKYGKRVHILPVDDT 127
+ + + +A ++ I + + R NLR+R+ D V +++ D+ +++ LP+ DT
Sbjct: 63 KAELIFSTVALESVPPRHIAIVRDGRFNLRIRITDTVKLYRVDKDIPVVSKLNFLPIKDT 122
Query: 128 IEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPE-----YCVVA 182
+E + GN+FD +++P+ + P+ G ++ V G+ VEFKV + + + V
Sbjct: 123 VENIRGNIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFKVTKMIDAQDMEIKHGSVT 182
Query: 183 PDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP 242
T ++C+ R E E + VGYDDVGG R QMA+IRELVELPLRH QL+ IGVKPP
Sbjct: 183 STTSVYCDETISREEVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPP 242
Query: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302
KGILLYGPPG+GKTLIARA+ANETGAF F INGPEIMSK+AGESESNLRKAFEEAEKN+P
Sbjct: 243 KGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 302
Query: 303 SIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALR 362
+IIFIDEID++APKREK+ GEVERRIVSQLLTLMDG+K+R++VIV+GATNRPNSIDPALR
Sbjct: 303 AIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALR 362
Query: 363 RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEA 422
R+GRFDREI+IGVPDE GRLE+LRIHTKNMK+S+DVDL I K+ HG+ G+DLA+LC+EA
Sbjct: 363 RYGRFDREIEIGVPDETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEA 422
Query: 423 ALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWED 482
ALQ IREK+ IDL+ E IDA++L S+ V E+F+ A+ ++PS+LRETV++ PNV W D
Sbjct: 423 ALQQIREKLPQIDLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVIQSPNVKWSD 482
Query: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
IGGLE VK+EL+ETVQYPVE+PEKF KFGM+P+KGVLFYGPPGCGKTLLAKA+A EC+AN
Sbjct: 483 IGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKAN 542
Query: 543 FISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
FIS+KGPELL+MW GESE+N+R++F +AR +APCVLFFDE+DSIA
Sbjct: 543 FISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIA 587
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 154/245 (62%), Gaps = 3/245 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG+ + ++RE V+ P+ +P+ F G+ P KG+L YGPPG GKTL+A+AVA
Sbjct: 478 VKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVAT 537
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E A F I GPE++S GESESN+R F A AP ++F DEIDSIA R G
Sbjct: 538 ECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSS 597
Query: 324 -VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
R+++QLL+ MDG+ + +V VIGATNRP+ +D AL R GR D+ + I +PD R+
Sbjct: 598 GATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRV 657
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
+L+ K LS ++DL ++A+ T + GADL+ +C A IRE ++ +LE +
Sbjct: 658 SILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEY-ELEQKKKG 716
Query: 443 AEILN 447
+E+++
Sbjct: 717 SEMMD 721
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/561 (53%), Positives = 395/561 (70%), Gaps = 11/561 (1%)
Query: 31 LVVDEAINDD--NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCI--ALADDTCEEPK 86
L V EA D + + P TME+L GD I I+G K K + +D +
Sbjct: 5 LKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGKAYAIVYRGFLEDAGK-GI 63
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
IR++ +R N V +GD V V + ++K K+V + P G F+ ++K
Sbjct: 64 IRIDGYLRQNAGVAIGDRVKVKRV-EIKEAKKVVLAPTQPI---RFGPGFEDFVKRKILG 119
Query: 147 AYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVG 206
+ KG + ++ F V+ T P V T + + EPV E ++ +V
Sbjct: 120 QV--LSKGSKVTIGVLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVPDVT 177
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Y+D+GG+++++ ++RE++ELP+RHP+LF+ +G++PPKG+LL GPPG+GKTL+A+AVANE
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
GA F+ INGPEIMSK GE+E NLRK FEEAE+NAPSIIFIDEID+IAPKR++ GEVER
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 327 RIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR 386
R+V+QLLTLMDGLK R V+VIGATNRPN++DPALRR GRFDREI IGVPD GR E+L+
Sbjct: 298 RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ 357
Query: 387 IHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEIL 446
IHT+NM L++DVDL+ +A THG+VGADLAALC EAA++ +R + IDLE E I E+L
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVL 417
Query: 447 NSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 506
+++ VT + FK AL PSA+RE +VEVPNV WEDIGGLE VK+EL+E V++P++ E
Sbjct: 418 DNLKVTMDDFKEALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEV 477
Query: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
FEK G+ P KGVL +GPPG GKTLLAKA+ANE ANFISVKGPE+ + W GESE +REI
Sbjct: 478 FEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREI 537
Query: 567 FDKARQSAPCVLFFDELDSIA 587
F KARQSAPC++FFDE+D+IA
Sbjct: 538 FRKARQSAPCIIFFDEIDAIA 558
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/228 (53%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ + ++RE VE PL+ ++F+ IGV+PPKG+LL+GPPG+GKTL+A+AVAN
Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK-THGE 323
E+GA F + GPEI SK GESE +R+ F +A ++AP IIF DEID+IAPKR +
Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA 568
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V ++V+QLLT +DG++ V+VI ATNRP+ IDPAL R GR DR I + VPDE RL+
Sbjct: 569 VTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLD 628
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKM 431
+ +IHT++M L++DV+LE +AK T GY GAD+ ALC EAA+ +RE +
Sbjct: 629 IFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRESI 676
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 546 bits (1407), Expect = e-154, Method: Compositional matrix adjust.
Identities = 291/561 (51%), Positives = 384/561 (68%), Gaps = 10/561 (1%)
Query: 31 LVVDEAINDD--NSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIR 88
L V EA D V + P MEK GD I I GK + + IR
Sbjct: 11 LRVAEAFYRDVGRGVARIDPAVMEKYGLQSGDIIEIIGKSTVPAIVWPSYPEDRGTGIIR 70
Query: 89 MNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAY 148
++ +RSN V + D V + + K ++V + P + + G +AYL
Sbjct: 71 IDGSIRSNAGVGIDDKVRIRKVT-AKPAEKVTLAPTEPV--RLMGG--EAYLLRLLE--G 123
Query: 149 RPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYD 208
RPV KG V ++ F + T P VV +T I + +P E + + +V Y+
Sbjct: 124 RPVIKGQKIRVEVFGHTLTFVITATRPSGVVVVTRNTAIELKEKPAE-EVKRAVPDVTYE 182
Query: 209 DVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268
D+GG+++++ +RE++ELPL+HP+LF+ +G++PPKG+LLYGPPG+GKTLIA+AVANE A
Sbjct: 183 DIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDA 242
Query: 269 FFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRI 328
F I+GPEIMSK GESE LR+ FEEA++NAPSIIFIDEIDSIAPKRE+ GEVERR+
Sbjct: 243 HFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRV 302
Query: 329 VSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIH 388
V+QLL LMDGL++R VIVI ATNRP++IDPALRR GRFDREI+IGVPD+ GR E+L IH
Sbjct: 303 VAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIH 362
Query: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNS 448
T+ M L++DVDLE +A+ T+G+VGADL ALC EAA+ +R + ID+E E I AE++ +
Sbjct: 363 TRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIEN 422
Query: 449 MAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFE 508
+ VT E F AL PSA+RE +VEVPNV WEDIGGLE+ K+EL E V++P+++PE F
Sbjct: 423 LKVTREDFMEALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFR 482
Query: 509 KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFD 568
+ P +G+L +GPPG GKTLLAKA+ANE ANFISVKGPELL+ W GESE +VRE+F
Sbjct: 483 AANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR 542
Query: 569 KARQSAPCVLFFDELDSIATQ 589
KARQ APCV+FFDE+DS+A +
Sbjct: 543 KARQVAPCVIFFDEIDSLAPR 563
Score = 248 bits (633), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/269 (46%), Positives = 181/269 (67%), Gaps = 3/269 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++D+GG+ ++ E VE PL++P++F++ +KPP+GILL+GPPG+GKTL+A+AVAN
Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-HGE 323
E+ A F + GPE++SK GESE ++R+ F +A + AP +IF DEIDS+AP+R
Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSH 571
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V R+VSQLLT +DGL+ V+VI ATNRP+ IDPAL R GR +R I I PD+ R+E
Sbjct: 572 VTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVE 631
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443
+ +IH + L+DDV++E +A+ T GY GAD+ A+C EA + IRE + +E +A
Sbjct: 632 IFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEA 691
Query: 444 EILNSMAVTDEHFKTALGTSNPSALRETV 472
+ +T +HF+ AL PS +E V
Sbjct: 692 --AKKLKITKKHFEEALKKVRPSLTKEDV 718
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 273/540 (50%), Positives = 374/540 (69%), Gaps = 9/540 (1%)
Query: 50 TMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQ 109
+M KL GD I I G+ + + + +IR++ +R +++V +GD V+V +
Sbjct: 61 SMRKLNVEAGDYIEIIGQDGNSALAQVMPAYDISDDEIRIDGYIRKSIKVGIGDDVTVRK 120
Query: 110 CADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFK 169
+V +V + P N F Y+K + +P+ KG+ + ++E
Sbjct: 121 T-NVSPASKVVLAPTQPI---RFDNSFVEYVKDTLMD--KPLAKGETLPIPIYTGTLELT 174
Query: 170 VIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLR 229
V+ T P Y V T I EPV+ E +V ++D+G + + +IRE+VE P+R
Sbjct: 175 VVNTQPSNYVYVTGSTNIEIREEPVK-ESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMR 233
Query: 230 HPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESN 289
HP+LF+ +G+ PPKGILLYGPPG+GKTL+ARA+ANE GA+F +NGPEIMSK GESE
Sbjct: 234 HPELFQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQR 293
Query: 290 LRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIG 349
+R+ F+EAE+NAPSIIFIDEID+IAPKRE GEVE+R+V+QLLTLMDG+K R VIVIG
Sbjct: 294 IREIFKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKGRGRVIVIG 353
Query: 350 ATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHG 409
ATNRP++IDPALRR GRFDREI+I PD GR ++L++HT+NM ++DDVDL+++A+ T+G
Sbjct: 354 ATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYG 413
Query: 410 YVGADLAALCTEAALQCIREKMD--VIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSA 467
Y GADLAAL EAA+ +R +D ++L+ TI AEI+ + V+ F AL + PS
Sbjct: 414 YTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPSL 473
Query: 468 LRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 527
LRE VEVP VNW DIGGL+NVK++L+E V++P+ PE F K G++P KG+L +GPPG G
Sbjct: 474 LREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTG 533
Query: 528 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
KT+LAKA+A E ANFI+V+GPE+L+ W GESE +REIF KARQ+AP V+FFDE+DSIA
Sbjct: 534 KTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIA 593
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 188/308 (61%), Gaps = 9/308 (2%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + +V ++D+GG+ Q+RE VE PLR P+LF GV PPKGILL+GPPG+GK
Sbjct: 475 REVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGK 534
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
T++A+AVA E+GA F + GPEI+SK GESE +R+ F +A + AP++IF DEIDSIAP
Sbjct: 535 TMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAP 594
Query: 316 KRE-KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
R T V RIV+QLL MDG+ V++I ATNRP+ +DPAL R GRFDR I +
Sbjct: 595 IRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVP 654
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
PD+ R E+L++HTKN+ L++DV LE IA+ GY GADL AL EA + +R +
Sbjct: 655 PPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALVREATINAMR---SIY 711
Query: 435 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNV-----NWEDIGGLENV 489
+ D+ E +M +H K + ++ +E + NV DI E
Sbjct: 712 SMCDKQSRDECKGNMECYQKHIKECMNKTSFKVSKEDFEKALNVVKASLTQADIQRYERF 771
Query: 490 KRELQETV 497
+EL+ +
Sbjct: 772 SKELKRAI 779
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 275/513 (53%), Positives = 365/513 (71%), Gaps = 18/513 (3%)
Query: 87 IRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFTE 146
+R++ V+R+N +GD V V + + K+V + P+ + + F ++ Y
Sbjct: 67 VRIDSVMRNNCGASIGDKVKVRKVR-TEIAKKVTLAPIIRKDQRLK---FGEGIEEYVQR 122
Query: 147 AY--RPVRKGDLFLVRG----GMRSVEFKVIETDPPEYCV-VAPDTEIFCEGEPVRREDE 199
A RP+ + D V G G + FKV++T P + V + +T+I EP E
Sbjct: 123 ALIRRPMLEQDNISVPGLTLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPAS-EVL 181
Query: 200 NRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
+ + Y+D+GG+ +Q+ +IRE++ELPL+HP+LF+ +G+ PPKG++LYGPPG+GKTLIA
Sbjct: 182 EEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIA 241
Query: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
RAVANE+GA F INGPEIMSK G+SE LR+ F +AE+ APSIIFIDEIDSIAPKRE+
Sbjct: 242 RAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREE 301
Query: 320 THGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
GEVERR+V+QLLTLMDG+K R HVIVIGATNR ++IDPALRR GRFDREI+IGVPD
Sbjct: 302 VQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361
Query: 380 GRLEVLRIHTKNMKLSDDVD-----LERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
GR E+L IHT+NM L + LE +A T+G+VGADLAAL E+A+ +R + I
Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEI 421
Query: 435 DLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQ 494
DL D+ I EIL M VT++ FK AL + PS+LRE +VEVPNV+W+DIGGLE+VKRE++
Sbjct: 422 DL-DKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIK 480
Query: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 554
ETV+ P+ P+ F++ G+ PSKG L YGPPG GKTLLAKA+A E ANFIS+KGPE+L+
Sbjct: 481 ETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSK 540
Query: 555 WFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
W GESE +REIF KA+Q AP ++F DE+DSIA
Sbjct: 541 WVGESEKAIREIFKKAKQVAPAIVFLDEIDSIA 573
Score = 256 bits (653), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/269 (49%), Positives = 179/269 (66%), Gaps = 16/269 (5%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V +DD+GG+ +I+E VELPL P +FK +G++P KG LLYGPPG GKTL+A+AVA
Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE- 323
E+ A F I GPE++SK GESE +R+ F++A++ AP+I+F+DEIDSIAP+R T
Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583
Query: 324 VERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLE 383
V RIV+QLLT +DG++ V+VIGATNRP+ +DPAL R GRFD+ I I PD+ RL
Sbjct: 584 VTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLS 643
Query: 384 VLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443
+L++HTKNM L+ DVDL IA+ T GYVGADL LC EA + RE D
Sbjct: 644 ILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPD----------- 692
Query: 444 EILNSMAVTDEHFKTALGTSNPSALRETV 472
+ +V+ ++F AL T PS E +
Sbjct: 693 ----ATSVSQKNFLDALKTIRPSVDEEVI 717
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 263/547 (48%), Positives = 367/547 (67%), Gaps = 6/547 (1%)
Query: 46 LHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVV 105
L PDT+ L+ GD I I+G + IR++ R N V +G+ V
Sbjct: 23 LDPDTLLHLKLSPGDIIEIEGAETTAAKVWRADRQDWNTDTIRIDGFTRQNAEVGIGERV 82
Query: 106 SVHQCADVKYGKRVHILPVDDTIE---GVTGNLFDAYLK-PYFTEAYRPVRKG-DLFLVR 160
+ + K V P + +++ G + LK P PV + +R
Sbjct: 83 KIRKADAEKADTLVLAPPEEASVQFGSDAAGMVKRQILKRPVVARDIVPVMSSTNHPFMR 142
Query: 161 GGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQI 220
+++ +ET+P C+V DT++ EP+ E + Y+D+GG+ ++ ++
Sbjct: 143 SPGQAIPLIAVETEPEGVCLVTEDTDVELREEPISGF-ERTGGGITYEDIGGLENEIQRV 201
Query: 221 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 280
RE+VELP++HPQ+F+ +G++PP+G+LL+GPPG+GKTL+A+AVANET A FF I GPEI+S
Sbjct: 202 REMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIIS 261
Query: 281 KLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLK 340
K GESE LR+ FE+A+ ++PSIIFIDE+DSIAPKRE GEVERR+V+QLLT+MDGL+
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGLE 321
Query: 341 SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL 400
R VIVI ATNR +++DPALRR GRFDREI+IGVPDE+GR E+L+IHT+ M LSDDV+L
Sbjct: 322 GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNL 381
Query: 401 ERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTAL 460
+A DTHG+VGAD+ +L EAA++ +R + IDL++E I +++ M V E FK AL
Sbjct: 382 STLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGAL 441
Query: 461 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 520
PSA+RE +VE+P + W+D+GGL K ++E+V++P+ PEKF + G+ P GVL
Sbjct: 442 SEVEPSAMREVLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLL 501
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 580
YGPPG GKTL+AKA+ANE ANFISV+GP+LL+ W GESE +R+ F KARQ AP V+FF
Sbjct: 502 YGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFF 561
Query: 581 DELDSIA 587
DELDS+A
Sbjct: 562 DELDSLA 568
Score = 243 bits (620), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/266 (46%), Positives = 176/266 (66%), Gaps = 16/266 (6%)
Query: 202 LDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARA 261
L ++ +DDVGG+ + ++E VE PL P+ F +GV+PP G+LLYGPPG+GKTL+A+A
Sbjct: 456 LPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKA 515
Query: 262 VANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH 321
VANET A F + GP+++SK GESE +R+ F +A + AP++IF DE+DS+AP R +T
Sbjct: 516 VANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTG 575
Query: 322 G-EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G V R+V+QLLT +DGL+ V+VI ATNRP+ IDPAL R GRFDR + +G P G
Sbjct: 576 GNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEG 635
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDET 440
R ++L+IHT++ L+ DV L +A+ GYVG+DLA + EAA++ +R+ D D+
Sbjct: 636 REQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAAIEALRDDEDADDV---- 691
Query: 441 IDAEILNSMAVTDEHFKTALGTSNPS 466
MA HF+ A+ P+
Sbjct: 692 -------GMA----HFRAAMENVRPT 706
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/390 (52%), Positives = 281/390 (72%), Gaps = 7/390 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V YD +GG+ Q+ IRE++ELPL+ P+LFKS G+ P+G+LLYGPPG+GKT+IARAVA
Sbjct: 349 KVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA 408
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
NE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFIDE+D++ PKRE E
Sbjct: 409 NEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSE 468
Query: 324 VERRIVSQLLTLMDGL---KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
VE+R+V+ LLTLMDG+ S V+V+GATNRP ++D ALRR GRFD+EI+IG+P+
Sbjct: 469 VEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQD 528
Query: 381 RLEVLRIHTKNM-KLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
RL++L+ + + L +L R+A + HGYVGADL ALC EA L +R V+ +
Sbjct: 529 RLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRR---VLRKQPN 585
Query: 440 TIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQY 499
D+++ + +T F + PSA+RE ++VPNV+W DIGGLEN+K +L++ V++
Sbjct: 586 LPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEW 645
Query: 500 PVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGES 559
P++HP+ F + G+ P KGVL YGPPGC KT++AKA+ANE NF+++KGPEL+ + GES
Sbjct: 646 PLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGES 705
Query: 560 EANVREIFDKARQSAPCVLFFDELDSIATQ 589
E VREIF KAR AP ++FFDELD++A +
Sbjct: 706 ERAVREIFRKARAVAPSIIFFDELDALAVE 735
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 164/263 (62%), Gaps = 17/263 (6%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LLYGPPG KT+IA+A+AN
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTH--G 322
E+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A +R + G
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAG 743
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
V R+++QLLT MDG++ +V V+ ATNRP+ ID AL R GR DR I + +PD R
Sbjct: 744 NVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRR 803
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
E+L + +M +S++VDL+ + T Y GA++ A+C EAAL + +E I
Sbjct: 804 EILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLAL----------EENIK 853
Query: 443 AEILNSMAVTDEHFKTALGTSNP 465
A+ + HF AL P
Sbjct: 854 AD-----CIMKRHFTQALSIVTP 871
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/406 (50%), Positives = 289/406 (71%), Gaps = 8/406 (1%)
Query: 188 FCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
F E + +E +N+ +V YD +GG+ Q+ IRE++ELPL+ P+LFKS G+ P+G+LL
Sbjct: 334 FTEIDKNSKEQDNQF-KVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLL 392
Query: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 307
YGPPG+GKT+IARAVANE GA+ INGPEI+SK GE+E+ LR+ F EA PSIIFI
Sbjct: 393 YGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFI 452
Query: 308 DEIDSIAPKREKTHGEVERRIVSQLLTLMDGLK---SRAHVIVIGATNRPNSIDPALRRF 364
DE+D++ PKRE EVE+R+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR
Sbjct: 453 DELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRP 512
Query: 365 GRFDREIDIGVPDEVGRLEVLRIHTKNM-KLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
GRFD+EI+IGVP+ RL++L+ + + L + +L ++A HGYVGADL LC EA
Sbjct: 513 GRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAG 572
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI 483
L +R ++ + D ++ + +T + F A+ PSA+RE ++VPNV+W DI
Sbjct: 573 LCALRR---ILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDI 629
Query: 484 GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF 543
GGLE++K +L++ V++P++HPE F + G+ P KGVL YGPPGC KT++AKA+ANE NF
Sbjct: 630 GGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNF 689
Query: 544 ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
+++KGPEL+ + GESE VRE F KAR AP ++FFDELD++A +
Sbjct: 690 LAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVE 735
Score = 216 bits (549), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 163/263 (61%), Gaps = 17/263 (6%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG+ ++ + VE PL+HP+ F +G++PPKG+LLYGPPG KT+IA+A+AN
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT--HG 322
E+G F I GPE+M+K GESE +R+ F +A APSIIF DE+D++A +R + G
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAG 743
Query: 323 EVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRL 382
V R+++QLLT MDG++ V ++ ATNRP+ ID AL R GR DR I + +PD R
Sbjct: 744 NVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRR 803
Query: 383 EVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETID 442
E+ ++ +M +S++VDL+ + T Y GA++ A+C EAAL + +E I
Sbjct: 804 EIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLAL----------EEDIQ 853
Query: 443 AEILNSMAVTDEHFKTALGTSNP 465
A + + HF AL T P
Sbjct: 854 ANL-----IMKRHFTQALSTVTP 871
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/383 (51%), Positives = 274/383 (71%), Gaps = 6/383 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + +GG++ Q+AQIR++VELP ++P+LFK + PP+G+LLYGPPG+GKT++ RAVA
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E A F I+GP ++ K GE+ES LRK FE+A + PSIIFIDEID++APKR + E
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEA 395
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
E R V+ LLTL+DG+ + V+VI ATNRPNSID ALRR GR ++EI+IG+PD+ RL++
Sbjct: 396 ESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDI 455
Query: 385 LRIHTKNMKLS-DDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDA 443
+++ + +D LE +A TH YVGADLAA+ EAAL+ I+ I L+ +T
Sbjct: 456 IKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKR---TISLQKDTSGL 512
Query: 444 EILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEH 503
+I ++ + D F AL + SA+RE ++E PNV+W DIGG E VK++L+E+V++P+ H
Sbjct: 513 DIFGAVQMDDLEF--ALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTH 570
Query: 504 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 563
E F + G+ P KGVL YGPPGC KT+ AKAIA E NFI+VKGPEL + GESE V
Sbjct: 571 GETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAV 630
Query: 564 REIFDKARQSAPCVLFFDELDSI 586
R++F KARQ++P V+FFDE+D++
Sbjct: 631 RQVFQKARQASPSVIFFDEIDAL 653
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 161/256 (62%), Gaps = 17/256 (6%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V + D+GG + +++E VE PL H + F +GV+PPKG+LLYGPPG KT+ A+A+A
Sbjct: 545 VHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIAT 604
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
ETG F + GPE+ K GESE +R+ F++A + +PS+IF DEID++ R + +
Sbjct: 605 ETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNS-- 662
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
R+V+ LL +DG+++ +V+V+ ATNRP+ IDPAL R GR DR + +G P+ R ++
Sbjct: 663 SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQI 722
Query: 385 LRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAE 444
++I + MK ++DVDL+ IA+ T G GA++ ALC EA L + E DLE + I
Sbjct: 723 VKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHE-----DLEAKEI--- 774
Query: 445 ILNSMAVTDEHFKTAL 460
HFKTAL
Sbjct: 775 -------CQAHFKTAL 783
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 74/110 (67%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
V + IGGL+ ++++ V+ P ++PE F+ F + P +GVL YGPPG GKT++ +A+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
E A ++ GP ++ + GE+E+ +R+IF+ AR P ++F DE+D++A
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALA 385
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/417 (47%), Positives = 267/417 (64%), Gaps = 12/417 (2%)
Query: 176 PEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFK 235
P + T I E N + + Y VGG+ K++ ++ +E+PL P LF
Sbjct: 213 PPFIFRKGSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFS 272
Query: 236 SIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFE 295
S GV PP+GILL+GPPG+GKT++ R VAN + A INGP I+SK GE+E+ LR F
Sbjct: 273 SFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFN 332
Query: 296 EAEKNAPSIIFIDEIDSIAPKREKT-HGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRP 354
EA K PSIIFIDEIDSIAP R GEVE R+V+ LLTLMDG+ + V+VI ATNRP
Sbjct: 333 EARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRP 392
Query: 355 NSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMK----LSDDVDLERIAKDTHGY 410
NS+DPALRR GRFD+E++IG+PD R ++L M + D ++ IA THGY
Sbjct: 393 NSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGY 452
Query: 411 VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
VGADL ALC E+ ++ I+ + D ID S+ VT + ++A+ PSA+RE
Sbjct: 453 VGADLTALCRESVMKTIQRGLGT----DANIDK---FSLKVTLKDVESAMVDIRPSAMRE 505
Query: 471 TVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL 530
+E+P V W DIGG E +K +++E +Q P+E E F + G+S KGVL YGPPGC KTL
Sbjct: 506 IFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTL 565
Query: 531 LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
AKA+A E NF++VKGPE+ + GESE +REIF KAR +AP ++FFDE+D+++
Sbjct: 566 TAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALS 622
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 164/284 (57%), Gaps = 18/284 (6%)
Query: 155 DLFLVRGGMRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVR 214
D F ++ ++ VE +++ P EIF E + +V + D+GG
Sbjct: 480 DKFSLKVTLKDVESAMVDIRPSAM------REIFLE-----------MPKVYWSDIGGQE 522
Query: 215 KQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCIN 274
+ +++E+++LPL + F +G+ PKG+LLYGPPG KTL A+A+A E+G F +
Sbjct: 523 ELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVK 582
Query: 275 GPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLT 334
GPEI +K GESE +R+ F +A APSIIF DEID+++P R+ + +++ LL
Sbjct: 583 GPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLN 642
Query: 335 LMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKL 394
+DG++ V+++ ATNRP+ ID AL R GR DR I +G PD RLE+L+ TK
Sbjct: 643 EIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNT 702
Query: 395 SDD-VDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLE 437
+ VDL +A T GY GA++ LC EA L I E +DV +E
Sbjct: 703 EESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVE 746
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/414 (46%), Positives = 284/414 (68%), Gaps = 9/414 (2%)
Query: 33 VDEAINDDNSVVVLHPDTMEKLQFFRGDTILIKGKKRKDTVCIALADDTCEEPKIRMNKV 92
+DE + DN + + + M++L G T+L+KGKK+++ + IA D + ++ + ++
Sbjct: 347 IDENL--DNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKKHYVVISFA 404
Query: 93 VRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGN-LFDAYLKPYFTEAYRPV 151
++ NLR+ D++ +H + K + V + P DTI ++ L A + PY +Y+P+
Sbjct: 405 MKKNLRLMHNDIIKIHPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVIHPYLKNSYKPL 464
Query: 152 RKGDLFLVRGGMRSVEFKVIETDPPE-----YCVVAPDTEIFCEGEPVRRED-ENRLDEV 205
R + +EFKV++ E + + +++ E ++RED E D++
Sbjct: 465 RVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYLKREDYEENNDDI 524
Query: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Y+D+GG++KQ+ +IREL+ELPL++P++F SIG+ PKG+L++G PG+GKT IA+A+ANE
Sbjct: 525 TYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIANE 584
Query: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
+ A+ + INGPEIMSK GESE LRK F++A + P IIFIDEIDSIA KR K++ E+E
Sbjct: 585 SNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNELE 644
Query: 326 RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
+R+VSQLLTLMDGLK +V+V+ ATNRPNSIDPALRRFGRFDREI+I VPDE GR E+L
Sbjct: 645 KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEIL 704
Query: 386 RIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDE 439
TK MKL DV+L +IAK+ HGYVGADLA LC EAA+QCI+E + +DL++E
Sbjct: 705 LTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFLDLDEE 758
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 124/158 (78%)
Query: 432 DVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKR 491
D +D + I A ILN + + +HF+ AL NPS+LRE V++P V W DIGG+ VK
Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query: 492 ELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPEL 551
+L+ET+ YP+E+ + KF + +KG+L YGPPGCGKTLLAKAIANEC+ANFISVKGPEL
Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query: 552 LTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
LTMWFGESEANVR++FDKAR ++PC++FFDE+DS+A +
Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE 1042
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 154/242 (63%), Gaps = 1/242 (0%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + ++ V ++D+GG+ + Q++E + PL + L+ KGILLYGPPG GK
Sbjct: 922 RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGK 981
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P IIF DEIDS+A
Sbjct: 982 TLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAK 1041
Query: 316 KRE-KTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
+R T+ + R+++Q+LT +DG+ + + +I ATNRP+ +D AL R GR D+ I I
Sbjct: 1042 ERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYIS 1101
Query: 375 VPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI 434
+PD R + + KN L++DVD+ +AK T G+ GAD+ LC A + I+E + ++
Sbjct: 1102 LPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLL 1161
Query: 435 DL 436
++
Sbjct: 1162 NI 1163
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 77/112 (68%)
Query: 478 VNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
+ +ED+GG++ +++E ++ P+++PE F G+S KGVL +G PG GKT +AKAIAN
Sbjct: 524 ITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIAN 583
Query: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
E A + GPE+++ GESE +R+IF KA + PC++F DE+DSIA +
Sbjct: 584 ESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/428 (44%), Positives = 269/428 (62%), Gaps = 45/428 (10%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ D+GG+ + ++ ELV +P++HP++++ G+ PP+G+LL+GPPG GKT++A A+A
Sbjct: 170 DISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALA 229
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
NE G F I+ P I+S ++GESE +R+ FEEA+ AP ++FIDEID++ PKRE E
Sbjct: 230 NELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQRE 289
Query: 324 VERRIVSQLLTLMDGLKSRAH----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379
+ERRIV+Q LT MD L V+VIGATNRP+S+D ALRR GRFDREI + VP +
Sbjct: 290 MERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQD 349
Query: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR----------- 428
R ++LR K +KLS D D ++AK T GYVGADL AL A + I+
Sbjct: 350 AREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNK 409
Query: 429 ------------------EKMDVIDLEDETIDAEILNS------------MAVTDEHFKT 458
+ D + L+ +I LN+ +A+ + F
Sbjct: 410 LDLNSDPRFNELDSDMALDSNDSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIE 469
Query: 459 ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGV 518
AL PS+ RE VP V+W +IG L++++ ELQ + P++ PE ++ G+S GV
Sbjct: 470 ALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGV 529
Query: 519 LFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVL 578
L +GPPGCGKTLLAKA+ANE +ANFIS++GPELL + GESE VR++F +AR S+PCV+
Sbjct: 530 LLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVI 589
Query: 579 FFDELDSI 586
FFDELD++
Sbjct: 590 FFDELDAM 597
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 168/266 (63%), Gaps = 4/266 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++++G ++ +++ + P++ P+L++S+G+ P G+LL+GPPG GKTL+A+AVAN
Sbjct: 489 VSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVAN 548
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E+ A F I GPE+++K GESE +R+ F A ++P +IF DE+D++ P+R+ + E
Sbjct: 549 ESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEA 608
Query: 325 ERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEV 384
R+V+ LLT +DGL R+ V VI ATNRP+ IDPA+ R GR D+ + + +PD R+E+
Sbjct: 609 SSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEI 668
Query: 385 LRIHTKNMKLSDDVDLERIAKD--THGYVGADLAALCTEAALQCIREKM--DVIDLEDET 440
L+ TK L ++V+L+ + +D + GADLAAL EAA+ +R + D+ E E
Sbjct: 669 LKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEI 728
Query: 441 IDAEILNSMAVTDEHFKTALGTSNPS 466
L + VT+ F+ A PS
Sbjct: 729 TQHSALEPIRVTNADFELAFKNIKPS 754
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/432 (45%), Positives = 269/432 (62%), Gaps = 45/432 (10%)
Query: 199 ENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
E ++ V ++DVGG + ++ +++ + +RHP+++ +GV PP+G+LL+GPPG GKTL+
Sbjct: 256 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 314
Query: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE 318
A A+A E + PEI+S ++GESE LR+ FE+A NAP IIFIDEID+I PKRE
Sbjct: 315 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 374
Query: 319 KTHGEVERRIVSQLLTLMDGLK---SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDREI +G+
Sbjct: 375 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 434
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCI-REKMDVI 434
PDE R +L+ + ++L D +A T G+VGADL ALC EAA+ + R M +
Sbjct: 435 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 494
Query: 435 DLEDETIDAEILNSMAVTDEHFKT------------------------------------ 458
+ + + + E L S V +E T
Sbjct: 495 EQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELN 554
Query: 459 ----ALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSP 514
AL + PSA RE V VPNV W DIG LE+++ EL + PV +P++F+ G+
Sbjct: 555 DFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVT 614
Query: 515 SKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA 574
GVL GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GESE VR++F +A+ SA
Sbjct: 615 PAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSA 674
Query: 575 PCVLFFDELDSI 586
PCV+FFDE+D++
Sbjct: 675 PCVIFFDEVDAL 686
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 164/272 (60%), Gaps = 11/272 (4%)
Query: 194 VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 253
+RE + V + D+G + ++ + P+R+P FK++G+ P G+LL GPPG
Sbjct: 567 AKREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGC 626
Query: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 313
GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 627 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 686
Query: 314 APKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +
Sbjct: 687 CPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746
Query: 374 GVPDEVGRLEVLRIHTKNMK---LSDDVDLERIAKDTH--GYVGADLAALCTEAALQCIR 428
G+P RL +L+ TKN L DV+LE IA D Y GADL+AL EA++ +R
Sbjct: 747 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 806
Query: 429 EKMDVIDLEDETIDAEILNSMAVTDEHFKTAL 460
++M +E + V+ +HF+ A
Sbjct: 807 QEMARQKSGNEK------GELKVSHKHFEEAF 832
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/460 (42%), Positives = 264/460 (57%), Gaps = 77/460 (16%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
+ + ++GGV + IRE +E P+ HP+++ +GV+PP+GILL+GP G GKTL+A+A+A
Sbjct: 213 INFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG 272
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEV 324
E F I+ EI S ++GESE+ +R F A AP IIFIDEID+IAPKRE ++
Sbjct: 273 ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDM 332
Query: 325 ERRIVSQLLTLMDGLK-------------------------------------------- 340
ERRIVSQLLT MD L
Sbjct: 333 ERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNK 392
Query: 341 ------SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKL 394
+ HVIVIGATNRP S+D ALR GRFD+EI +G+PD+ R ++L++ T M+L
Sbjct: 393 QQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRL 452
Query: 395 SDDVDLERIAKDTHGYVGADLAALCTEAALQCIRE---------------------KMDV 433
++ D E IA T GYVGAD+ L EAA + ++
Sbjct: 453 ENNFDYEEIATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINN 512
Query: 434 IDLEDET------IDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLE 487
I L E ++ E LNS+ + FK AL P+A RE +PNV W+D+G L
Sbjct: 513 IGLSTELLISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALS 572
Query: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVK 547
V+ EL ++ P+ +P+K++ G+ GVL YGPPGCGKTLLAKAIA+ECQANFISVK
Sbjct: 573 GVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVK 632
Query: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
GPELL + GESE VR++F +A S+PCV+FFDE D++A
Sbjct: 633 GPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALA 672
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 163/281 (58%), Gaps = 15/281 (5%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + V +DDVG + ++ + P+R+P+ +K++G+ P G+L+YGPPG G
Sbjct: 553 KREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCG 612
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+A+A+E A F + GPE+++K GESE +R+ F+ A ++P +IF DE D++A
Sbjct: 613 KTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALA 672
Query: 315 PKR---EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREI 371
PKR + + R+V+QLLT MDGL+ R+ V +I ATNRP+ ID A+ R GR D+ +
Sbjct: 673 PKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMV 732
Query: 372 DIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKD--THGYVGADLAALCTEAALQCIRE 429
+ +P R E+L+ T + + DVDL ++ D H + GADL+ L EAA I
Sbjct: 733 YVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISR 792
Query: 430 KMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRE 470
D E +T VT E F AL PS R+
Sbjct: 793 GFDNNSTEPDT----------VTMEDFIFALSKIKPSVSRK 823
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 78/113 (69%)
Query: 475 VPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
+P +N+ ++GG+E+ R+++E ++YP+ HPE + G+ P +G+L +GP GCGKTLLAKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
IA E + ++ E+ + GESEA VR +F A APC++F DE+D+IA
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIA 322
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/435 (43%), Positives = 268/435 (61%), Gaps = 45/435 (10%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
R E ++ V ++DVGG + ++ +++ + +RHP++++ +GV PP+G+LL+GPPG GK
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TL+A A+A E + PEI+S ++GESE LR+ F++A NAP I+FIDEID+I P
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITP 370
Query: 316 KREKTHGEVERRIVSQLLTLMDGLK---SRAHVIVIGATNRPNSIDPALRRFGRFDREID 372
KRE ++ERRIV+QLLT MD L + A V+VIGATNRP+S+DPALRR GRFDRE+
Sbjct: 371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVC 430
Query: 373 IGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIR---- 428
+G+PDE R +L+ + ++L + + +A T G+VGADL ALC EAA+ +
Sbjct: 431 LGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVLM 490
Query: 429 -------------------------------EKMDVID-----LEDE-TIDAEILNSMAV 451
E D + L D+ + E + + +
Sbjct: 491 KQQAQQKKKPEIEGLPSEGDQEERLGAEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCI 550
Query: 452 TDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFG 511
F AL PSA RE V VPNV W DIG LE+++ EL + PV +P++F G
Sbjct: 551 ELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLG 610
Query: 512 MSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKAR 571
+ G+L GPPGCGKTLLAKA+ANE NFISVKGPELL M+ GESE VR++F +A+
Sbjct: 611 LGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAK 670
Query: 572 QSAPCVLFFDELDSI 586
SAPCV+FFDE+D++
Sbjct: 671 NSAPCVIFFDEVDAL 685
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 168/278 (60%), Gaps = 11/278 (3%)
Query: 194 VRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 253
+RE + V + D+G + ++ + P+R+P F+++G+ P GILL GPPG
Sbjct: 566 AKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGC 625
Query: 254 GKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI 313
GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+ A+ +AP +IF DE+D++
Sbjct: 626 GKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 685
Query: 314 APKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDI 373
P+R R+V+QLLT MDGL++R V ++ ATNRP+ IDPA+ R GR D+ + +
Sbjct: 686 CPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 374 GVPDEVGRLEVLRIHTKNMK---LSDDVDLERIAKD--THGYVGADLAALCTEAALQCIR 428
G+P R+ +L+ TKN L +DV+LE IA D + Y GADL AL EA+L +R
Sbjct: 746 GLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALR 805
Query: 429 EKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
++ I + + A + V+ +HF+ A PS
Sbjct: 806 QE---ITAQKNGVGA---GELKVSHKHFEDAFKKVKPS 837
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 203/481 (42%), Positives = 282/481 (58%), Gaps = 59/481 (12%)
Query: 165 SVEFKVIETDPPEYCVVAPDTEIFCEGE-PVRRE---DENRLDEVGYDDVGGVRKQMAQI 220
SV + ETD P+ V + EG V+R+ ++ +GG+ +AQ+
Sbjct: 158 SVSESITETDDPKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQL 217
Query: 221 RELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMS 280
EL+ LP+ HP++F S GV+PP+G+LL+GPPG GKT IA A+A E F I+ P ++S
Sbjct: 218 MELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVS 277
Query: 281 KLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE-KTHGEVERRIVSQLLTLMDGL 339
++GESE +R F+EA AP ++F DEID+I PKR+ E+ERRIV+QLLT MD L
Sbjct: 278 GMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDEL 337
Query: 340 KSRAH----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLS 395
VI+IGATNRP+S+D ALRR GRFDREI + VP+EV RL +L+ + N+K+
Sbjct: 338 TMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKID 397
Query: 396 DDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI----------------DLE-D 438
+D ++AK T G+VGADL AL T A I+ ++E D
Sbjct: 398 GAIDFAKLAKLTPGFVGADLKALVTAAGTCAIKRIFQTYANIKSTPTTATDSSEDNMEID 457
Query: 439 ET---------------------------------IDAEILNSMAVTDEHFKTALGTSNP 465
ET + E L+ +++ E F AL T P
Sbjct: 458 ETANGDESSLKNTANMIDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKALPTIQP 517
Query: 466 SALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPG 525
+A RE VP+V W ++G L+ V+ EL + P++ PE +EK G+S GVL +GPPG
Sbjct: 518 TAKREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPG 577
Query: 526 CGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDS 585
CGKTLLAKA+ANE +ANFIS+KGPELL + GESE ++R++F +AR S PCV+FFDELD+
Sbjct: 578 CGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDA 637
Query: 586 I 586
+
Sbjct: 638 L 638
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 176/288 (61%), Gaps = 16/288 (5%)
Query: 195 RREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSG 254
+RE + +V + +VG +++ ++ + P++ P+L++ +G+ P G+LL+GPPG G
Sbjct: 520 KREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCG 579
Query: 255 KTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
KTL+A+AVANE+ A F I GPE+++K GESE ++R+ F A + P +IF DE+D++
Sbjct: 580 KTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALV 639
Query: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIG 374
P+R+ + E R+V+ LLT +DGL R + VIGATNRP+ IDPA+ R GR D+ + I
Sbjct: 640 PRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIE 699
Query: 375 VPDEVGRLEVLRIHTKN--MKLSDDVDLERIAKD--THGYVGADLAALCTEAALQCIREK 430
+P+ +L++++ TK+ LS DVD E I ++ + + GADLAAL E+++ ++ K
Sbjct: 700 LPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRK 759
Query: 431 M----DVIDLEDETIDAEILN--------SMAVTDEHFKTALGTSNPS 466
++ + D +D E + + VT F++AL PS
Sbjct: 760 FFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPS 807
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/404 (43%), Positives = 253/404 (62%), Gaps = 22/404 (5%)
Query: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
+ D GG++K + ++ V P+ +P+ FK IGVKPP GIL +GPPG GKT +A A+ANE
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
G F+ I+ E++S ++G SE N+R+ F +A + APSI+FIDEID+I KRE E+E+
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 327 RIVSQLLTLMDGL----------KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVP 376
RIV+QLLT MDG S V+VIGATNRP+++DPALRR GRF+ EI + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 377 DEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVI-- 434
DE R E+L + + ++L D +RIA+ T G+VGADL ++ A + I+ +D
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKS 471
Query: 435 ----DLEDET------IDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIG 484
D ED+ E L + V F+ A+ S RE VP+V W+D+G
Sbjct: 472 EQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVG 531
Query: 485 GLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFI 544
GL++++ + + P++ P+ ++ FG+ G L YGPPGCGKTL+AKA ANE ANF+
Sbjct: 532 GLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFM 591
Query: 545 SVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAT 588
+KG ELL + GESE +R +F +AR APCV+FFDE+D++ T
Sbjct: 592 HIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTT 635
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 154/273 (56%), Gaps = 6/273 (2%)
Query: 196 REDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK 255
RE + + +V +DDVGG+ Q + P++ P ++K+ GV G LLYGPPG GK
Sbjct: 516 REGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGK 575
Query: 256 TLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP 315
TLIA+A ANE GA F I G E+++K GESE +R F+ A AP +IF DE+D++
Sbjct: 576 TLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTT 635
Query: 316 KREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
R K V R+++Q L +DG R +V VIGATNRP+ +DPA R GRF + + +
Sbjct: 636 SRGKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPL 694
Query: 376 PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDT-HGYVGADLAALCTEAALQCIREKMDVI 434
P+ R +L+ + + VDL+ IAK+ G+ GADLA L +A Q + E +
Sbjct: 695 PNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSS 754
Query: 435 D-LEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
+ ED+ D + + HF+ AL +PS
Sbjct: 755 ESSEDDVTD---ITQCTIKTRHFEQALSLVSPS 784
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 76/110 (69%)
Query: 480 WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC 539
++D GG++ + EL+ V +P+ +PE F+K G+ P G+LF+GPPGCGKT LA AIANE
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 540 QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
F + E+++ G SE N+RE+F KA ++AP ++F DE+D+I ++
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK 341
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/388 (43%), Positives = 245/388 (63%), Gaps = 23/388 (5%)
Query: 209 DVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGA 268
++GG + + +REL+ P R+P +++G+K P+G+LLYGPPG+GKT + RAV E A
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 269 FFFCINGPEIMSKLAGESESNLRKAFEEAEKNA----PSIIFIDEIDSIAPKREKTHGEV 324
++ + AGESE LR+AF EA +A PS+IFIDEID + P+R+ E
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARR-EQ 141
Query: 325 ERRIVSQLLTLMDGLK---SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ RI SQL TLMD K S V+V+ +TNR ++IDPALRR GRFD +++ P+E R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETI 441
L++L+++TK + L VDL+ IA +GYVGADL ALC EA + + D
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSD--------- 252
Query: 442 DAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPV 501
S+ +T + FK A PS R VE+P V W+D+GGL+++K++LQ+ V++P+
Sbjct: 253 ------SLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPI 306
Query: 502 EHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 561
+H F K G+SP +G+L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE EA
Sbjct: 307 KHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEA 366
Query: 562 NVREIFDKARQSAPCVLFFDELDSIATQ 589
+R F +AR ++P ++FFDE D +A +
Sbjct: 367 LLRNTFQRARLASPSIIFFDEADVVACK 394
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 163/286 (56%), Gaps = 19/286 (6%)
Query: 191 GEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGP 250
G + R + +V +DDVGG++ ++++ VE P++H F +G+ P +GILL+GP
Sbjct: 269 GPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGP 328
Query: 251 PGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEI 310
PG KT +A+A AN A FF ++ E+ S GE E+ LR F+ A +PSIIF DE
Sbjct: 329 PGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEA 388
Query: 311 DSIAPKR----EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGR 366
D +A KR V R++S LLT MDGL+ ++V+ ATNRP +ID AL R GR
Sbjct: 389 DVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGR 448
Query: 367 FDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQC 426
FD + + PD R E+L++HT+NM L DDVDL +IA++T + GA+L LC E+
Sbjct: 449 FDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVS 508
Query: 427 IREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETV 472
+RE + + AV + HF+TA + P+ E V
Sbjct: 509 LREN---------------IAATAVFNRHFQTAKSSLKPALTIEEV 539
>sp|Q0VA52|SPA5L_XENTR Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus
tropicalis GN=spata5l1 PE=2 SV=1
Length = 593
Score = 319 bits (818), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 249/414 (60%), Gaps = 23/414 (5%)
Query: 166 VEFKVIETDPP--EYCVVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIREL 223
V ++++TDP ++ T I + +++L E V + A ++E+
Sbjct: 147 VHIEILDTDPATSNAGLITGKTSIVIKEVITLEWYKHKLQEAPQLKVAAMDDTCASLKEI 206
Query: 224 VELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLA 283
+ +PL +P+ +G+ PKG+LL GPPG GKTL+ +AVA E GA+ ++GP I
Sbjct: 207 IHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRP 266
Query: 284 GESESNLRKAFEEAEKNA---PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLK 340
GESE NLRK FE+A + A P+++FIDE+D++ PKR ++ E R+V+QLLTLMDG+
Sbjct: 267 GESEENLRKIFEKAREAACSGPALLFIDEVDALCPKRGHSNSAPENRVVAQLLTLMDGID 326
Query: 341 SRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDL 400
S ++ + AT+RP++IDPALRR GRFDRE+ IG P R +L + NM DVD
Sbjct: 327 SDNKMVTVAATSRPDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDA 386
Query: 401 ERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMA--VTDEHFKT 458
+A T GYVGADL ALC +AA+Q + + L+S+ V+ HF
Sbjct: 387 AALADVTVGYVGADLTALCRDAAMQAVLQAS--------------LDSLCNLVSRAHFYE 432
Query: 459 ALGTSNPSALRETV--VEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
A PS+ R ++ VE V+WE IGGLE++K +L++++++P+++PE F + G++P K
Sbjct: 433 AFKRIRPSSARSSIGRVEFKPVHWEHIGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPK 492
Query: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKA 570
GVL YGPPGC KT L KA+A C +F S+ +L + + G+SE + ++ ++
Sbjct: 493 GVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADLFSPYVGDSEKTLAQVSNRC 546
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 483 IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN 542
+ +++ L+E + P+ +PE K G+ KGVL GPPG GKTLL KA+A E A
Sbjct: 193 VAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGKTLLVKAVAREVGAY 252
Query: 543 FISVKGPELLTMWFGESEANVREIFDKARQSA---PCVLFFDELDSIA 587
I + GP + GESE N+R+IF+KAR++A P +LF DE+D++
Sbjct: 253 VIGLSGPAIHGSRPGESEENLRKIFEKAREAACSGPALLFIDEVDALC 300
>sp|A7YSY2|SPA5L_BOVIN Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus
GN=SPATA5L1 PE=2 SV=1
Length = 767
Score = 309 bits (792), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 234/362 (64%), Gaps = 17/362 (4%)
Query: 230 HPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESN 289
+P+ S+G++ P+G+LL GPPG GKT + RAVA ETGA ++ P + GE+E N
Sbjct: 222 YPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEEN 281
Query: 290 LRKAFEEAEKNA---PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVI 346
+R+ F+ A + A P+++F+DE+D++ P+R H E R+V+Q+LTL+DG+ V+
Sbjct: 282 VRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDREVV 341
Query: 347 VIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKD 406
V+G+TNRP+++DPALRR GRFDRE+ IG P R +L++ T M +S VDL +A+
Sbjct: 342 VVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEM 401
Query: 407 THGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
T GYVGADL ALC EAA+Q + + ++ TID + F A PS
Sbjct: 402 TVGYVGADLTALCREAAMQALLHSEK--NQDNPTID----------ETDFLEAFKKIQPS 449
Query: 467 ALRET--VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPP 524
+ R V ++ V WE IGGLE+VK +L++++++P++ P +F + G++ KGVL YGPP
Sbjct: 450 SFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPP 509
Query: 525 GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584
GC KT L +A+A C+ +F+SV G +L + + G+SE + ++F +AR + P ++F DE+D
Sbjct: 510 GCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEID 569
Query: 585 SI 586
SI
Sbjct: 570 SI 571
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 156/295 (52%), Gaps = 47/295 (15%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
VG++ +GG+ ++++ +E PL+ P+ F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 463 VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKRE--KTHG 322
F ++G ++ S G+SE L + F +A N P+I+F+DEIDSI R +T
Sbjct: 523 SCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTEC 582
Query: 323 EVERRIVSQLLTLMDGL----------KSRAH---------------------VIVIGAT 351
V+ R++S LL +DG+ KS H VIV+ AT
Sbjct: 583 NVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAAT 642
Query: 352 NRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV 411
NRP+ +D AL R GR D+ I I PDE GRL +L++ TKN + DV LE++A +T +
Sbjct: 643 NRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFS 702
Query: 412 GADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
GADL LC EAAL ++E L V EHF +L T PS
Sbjct: 703 GADLGNLCKEAALLALQENG--------------LEVTTVKQEHFLESLKTVKPS 743
>sp|Q9BVQ7|SPA5L_HUMAN Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens
GN=SPATA5L1 PE=1 SV=2
Length = 753
Score = 303 bits (777), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 255/413 (61%), Gaps = 26/413 (6%)
Query: 180 VVAPDTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV 239
+V P T + GEP EV +GG+ + +REL+ LPLR+P+ ++G+
Sbjct: 177 LVTPRTRVSLGGEPPSEAQPQ--PEV---PLGGLSEAADSLRELLRLPLRYPRALTALGL 231
Query: 240 KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK 299
P+G+LL GPPG GKT + RAVA E GA ++ P + GE+E N+R+ F+ A +
Sbjct: 232 AVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARE 291
Query: 300 NA---PSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNS 356
A PS++F+DE+D++ P+R E R+V+Q+LTL+DG V+V+GATNRP++
Sbjct: 292 LASRGPSLLFLDEMDALCPQRGSR--APESRVVAQVLTLLDGASGDREVVVVGATNRPDA 349
Query: 357 IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLA 416
+DPALRR GRFDRE+ IG P R E+L++ T M +S VDL +A+ T GYVGADL
Sbjct: 350 LDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLT 409
Query: 417 ALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTDE-HFKTALGTSNPSALRETV--V 473
ALC EAA+ + + +E V DE F A PS+ R + +
Sbjct: 410 ALCREAAMHAL-------------LHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLM 456
Query: 474 EVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 533
++ V+WE+IGGLE+VK +L++++++P++ P +F + G++ KGVL YGPPGC KT L +
Sbjct: 457 DIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVR 516
Query: 534 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
A+A C +F+SV G +L + + G+SE + +IF +AR S P +LF DE+DSI
Sbjct: 517 ALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSI 569
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 155/283 (54%), Gaps = 35/283 (12%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V ++++GG+ ++++ +E PL+ P F +G+ PKG+LLYGPPG KT + RA+A
Sbjct: 461 VDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 520
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
F ++G ++ S G+SE L + F +A + P+I+F+DEIDSI R KT
Sbjct: 521 SCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGC 580
Query: 323 EVERRIVSQLLTLMDGLKSRA-------------------HVIVIGATNRPNSIDPALRR 363
+V+ R++S LL +DG+ + V++I ATNRP+ +D AL R
Sbjct: 581 DVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLR 640
Query: 364 FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423
GR D+ I I PD GRL +L++ TK M + DV LE +A +T + GADL LCTEAA
Sbjct: 641 PGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAA 700
Query: 424 LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPS 466
L ++E L++ V EHF +L T PS
Sbjct: 701 LLALQENG--------------LDATTVKQEHFLKSLKTVKPS 729
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 10/136 (7%)
Query: 457 KTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
+ +LG PS + EVP +GGL L+E ++ P+ +P G++ +
Sbjct: 183 RVSLGGEPPSEAQPQP-EVP------LGGLSEAADSLRELLRLPLRYPRALTALGLAVPR 235
Query: 517 GVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSA-- 574
GVL GPPG GKT L +A+A E A ++V P L GE+E NVR +F +AR+ A
Sbjct: 236 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASR 295
Query: 575 -PCVLFFDELDSIATQ 589
P +LF DE+D++ Q
Sbjct: 296 GPSLLFLDEMDALCPQ 311
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 178/237 (75%), Gaps = 3/237 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y+D+GG+ KQM +IRE+VELPL+HP+LF+ +G++PPKGILLYGPPG+GKTL+A+AVA
Sbjct: 167 VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVAT 226
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--THG 322
ET A F + G E++ K GE S ++ F+ A++ APSIIFIDEID+IA KR T G
Sbjct: 227 ETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGG 286
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
+ E +R + QLL MDG +R V +IGATNRP+ +DPA+ R GRFDR I++ PDE GR
Sbjct: 287 DREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGR 346
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L+IHT+ M L++DV+LE IAK T G VGA+L A+CTEA + IRE D + ++D
Sbjct: 347 LEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDD 403
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 85/118 (72%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E PNV +EDIGGLE +E++E V+ P++HPE FEK G+ P KG+L YGPPG GKTLL
Sbjct: 161 VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLL 220
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+A E A FI V G EL+ + GE + V++IF A++ AP ++F DE+D+IA +
Sbjct: 221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 172/238 (72%), Gaps = 3/238 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V YDD+GG+ +Q+ +IRE+VE PL+ P+LF+ +GV+PPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 175 DVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVA 234
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK--REKTH 321
N A F + PE++ K GE +R+ FE A + APSIIFIDEID+I + R+ T
Sbjct: 235 NHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATS 294
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R ++QLL MDG + VI ATNR + +DPAL R GRFDR I I +PDE G
Sbjct: 295 GDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEG 354
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R E+ +IHT++M L++DVDL+++AK T G GAD+ A+CTEA + IRE D++ ++D
Sbjct: 355 RYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDD 412
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 91/143 (63%), Gaps = 4/143 (2%)
Query: 447 NSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEK 506
SMAV D + L V E P+V+++DIGGL+ RE++E V+ P++ PE
Sbjct: 149 QSMAVVD----VLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPEL 204
Query: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
FEK G+ P KGVL YGPPG GKTLLAKA+AN A FI + PEL+ + GE VRE+
Sbjct: 205 FEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVREL 264
Query: 567 FDKARQSAPCVLFFDELDSIATQ 589
F+ AR+ AP ++F DE+D+I +
Sbjct: 265 FELAREKAPSIIFIDEIDAIGAR 287
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 174/238 (73%), Gaps = 3/238 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
+V Y+ +GG+ +Q+ +++E VELPL+ P+LF+ IG++PPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 147 DVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVA 206
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--TH 321
+ET A F I E + K GE +R FE A++ +PSIIFIDEID++A KR K T
Sbjct: 207 HETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTS 266
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + QLL +DG +SR +V ++ ATNRP+ +DPAL R GRFDR I++ +P+E G
Sbjct: 267 GDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDG 326
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
R E+L+IHT M L+++VD+E +A+ T G GADL A+CTEA + IR++ D + + D
Sbjct: 327 RREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMAD 384
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 83/118 (70%)
Query: 472 VVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
V E P+V++E IGGLE RE++ETV+ P++ PE FEK G+ P KGVL YGPPG GKTLL
Sbjct: 142 VEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLL 201
Query: 532 AKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
AKA+A+E A FI + E + + GE VR +F+ A++ +P ++F DE+D++A +
Sbjct: 202 AKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAK 259
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 171/238 (71%), Gaps = 4/238 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ ++D+GG+ Q+ I+E+VELPL++P+LF+ +G+ PPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 144 DISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--TH 321
ET A F + G E++ K GE +R F+ A++ +P IIFIDEID++A KR + T
Sbjct: 204 YETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG 263
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + QLL MDG SR V +I ATNRP+ +DPA+ R GRFDR I+I +PDE G
Sbjct: 264 GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDG 323
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RLE+L+IHT+ M L +VDL +AK VGADL A+CTEA + IRE+ + I ++D
Sbjct: 324 RLEILKIHTEKMNLK-NVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDD 380
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 90/123 (73%)
Query: 467 ALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526
A+ + E P++++EDIGGL N R+++E V+ P+++PE FEK G+ P KGVL YGPPG
Sbjct: 134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGT 193
Query: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
GKTLLAKA+A E A+F+ V G EL+ + GE VR++F A++ +PC++F DE+D++
Sbjct: 194 GKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAV 253
Query: 587 ATQ 589
A++
Sbjct: 254 ASK 256
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/238 (50%), Positives = 170/238 (71%), Gaps = 4/238 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ ++D+GG+ Q+ I+E+VELPL++P+LF+ +G+ PPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 144 DISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--TH 321
ET A F + G E++ K GE +R F+ A++ +P IIFIDEID++A KR + T
Sbjct: 204 YETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG 263
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + QLL MDG SR V +I ATNRP+ +DPA+ R GRFDR I+I +PDE G
Sbjct: 264 GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDG 323
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RLE+L+IHT+ M L VDL +AK VGADL A+CTEA + IRE+ + I ++D
Sbjct: 324 RLEILKIHTEKMNLK-GVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDD 380
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 90/123 (73%)
Query: 467 ALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526
A+ + E P++++EDIGGL N R+++E V+ P+++PE FEK G+ P KGVL YGPPG
Sbjct: 134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGT 193
Query: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
GKTLLAKA+A E A+F+ V G EL+ + GE VR++F A++ +PC++F DE+D++
Sbjct: 194 GKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAV 253
Query: 587 ATQ 589
A++
Sbjct: 254 ASK 256
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 168/237 (70%), Gaps = 4/237 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y+D+GG++KQ+ ++RE +ELPL+HP+LF+ +G+ PPKG+LLYGPPG GKTL+A+A+A+
Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 193
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
E A F + G E++ K GE + + FE A++ AP+IIFIDEID+I KR E T G
Sbjct: 194 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGG 253
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
E E R + QLL MDG R +V VI ATNRP+ +DPAL R GRFDR I++ +PD GR
Sbjct: 254 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 313
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L++HT+ MKL +VDL IA+ T G GADL A+ TEA + IRE+ + ED
Sbjct: 314 LEILKVHTRRMKLK-NVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQED 369
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 90/128 (70%)
Query: 462 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 521
+ +P+ L V+E PNV + DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL Y
Sbjct: 118 SKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLY 177
Query: 522 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
GPPGCGKTL+AKA+A+E A FI V G EL+ + GE V E+F+ A++ AP ++F D
Sbjct: 178 GPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 237
Query: 582 ELDSIATQ 589
E+D+I +
Sbjct: 238 EIDAIGAK 245
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y+D+GG++KQ+ ++RE +ELPL+HP+LF+ +G+ PPKG+LLYGPPG GKTL+A+A+A+
Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
E A F + G E++ K GE + + FE A++ AP+IIFIDEID+I KR E T G
Sbjct: 197 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGG 256
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
E E R + QLL MDG R +V VI ATNRP+ +DPAL R GRFDR I++ +PD GR
Sbjct: 257 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 316
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L++HT+ MKL VDL IA+ T G GADL A+ TEA + IRE+ + ED
Sbjct: 317 LEILKVHTRRMKLK-GVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQED 372
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 90/128 (70%)
Query: 462 TSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFY 521
+ +P+ L V+E PNV + DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL Y
Sbjct: 121 SKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLY 180
Query: 522 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFD 581
GPPGCGKTL+AKA+A+E A FI V G EL+ + GE V E+F+ A++ AP ++F D
Sbjct: 181 GPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID 240
Query: 582 ELDSIATQ 589
E+D+I +
Sbjct: 241 EIDAIGAK 248
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 167/237 (70%), Gaps = 4/237 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y+D+GG++KQ+ ++RE +ELPL+HP+LF+ +G+ PPKG+LLYGPPG GKTL+A+A+A+
Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
E A F + G E++ K GE + + FE A++ AP+IIFIDEID+I KR E T G
Sbjct: 194 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGG 253
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
E E R + QLL MDG R +V VI ATNRP+ +DPAL R GRFDR I++ +PD GR
Sbjct: 254 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 313
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L++HT+ MKL VDL IA+ T G GADL A+ TEA + IRE+ + ED
Sbjct: 314 LEILKVHTRRMKLR-GVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQED 369
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 90/129 (69%)
Query: 461 GTSNPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLF 520
+ +P+ L VVE PNV + DIGGL+ +EL+E ++ P++HPE FE+ G+ P KGVL
Sbjct: 117 ASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLL 176
Query: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFF 580
YGPPGCGKTL+AKAIA+E A FI V G EL+ + GE V E+F+ A++ AP ++F
Sbjct: 177 YGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFI 236
Query: 581 DELDSIATQ 589
DE+D+I +
Sbjct: 237 DEIDAIGAK 245
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/237 (52%), Positives = 165/237 (69%), Gaps = 4/237 (1%)
Query: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
V Y D+GG+ +Q+A++RE VELPL+HP+LF+ +G++PPKG+LLYGPPG GKTL+A+AVAN
Sbjct: 135 VTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194
Query: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--EKTHG 322
A F + G E++ K GE + + FE A++ AP+IIFIDEID+I KR E T G
Sbjct: 195 HVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGG 254
Query: 323 EVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
E E R + QLL MDG R +V VI ATNRP+ +DPAL R GRFDR I++ +PD GR
Sbjct: 255 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGR 314
Query: 382 LEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
LE+L++HT+ M L +VDL IA T G GADL A+ TEA + IR++ + ED
Sbjct: 315 LEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQED 370
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%)
Query: 464 NPSALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
+PS L V+E P V ++DIGGLE EL+E V+ P++HPE FEK G+ P KGVL YGP
Sbjct: 121 DPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGP 180
Query: 524 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
PGCGKTL+AKA+AN A FI V G EL+ + GE V E+F+ A++ AP ++F DE+
Sbjct: 181 PGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEI 240
Query: 584 DSIATQ 589
D+I +
Sbjct: 241 DAIGAK 246
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/238 (50%), Positives = 170/238 (71%), Gaps = 4/238 (1%)
Query: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
++ ++D+GG+ Q+ I+E+VELPL++P+LF+ +G+ PPKG+LLYGPPG+GKTL+A+AVA
Sbjct: 144 DISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVA 203
Query: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK--TH 321
ET A F + G E++ K GE +R F+ A++ +P IIFIDEID++A KR + T
Sbjct: 204 YETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTG 263
Query: 322 GEVE-RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVG 380
G+ E +R + QLL MDG SR V +I ATNRP+ +DPA+ R GRFDR I+I +PDE G
Sbjct: 264 GDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDG 323
Query: 381 RLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 438
RL++L+IHT+ M L VDL +AK VGADL A+CTEA + IRE+ + I ++D
Sbjct: 324 RLDILKIHTEKMNLK-GVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDD 380
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 90/123 (73%)
Query: 467 ALRETVVEVPNVNWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGC 526
A+ + E P++++EDIGGL N R+++E V+ P+++PE FEK G+ P KGVL YGPPG
Sbjct: 134 AMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGT 193
Query: 527 GKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSI 586
GKTLLAKA+A E A+F+ V G EL+ + GE VR++F A++ +PC++F DE+D++
Sbjct: 194 GKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAV 253
Query: 587 ATQ 589
A++
Sbjct: 254 ASK 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,333,432
Number of Sequences: 539616
Number of extensions: 10240106
Number of successful extensions: 47882
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1529
Number of HSP's successfully gapped in prelim test: 1605
Number of HSP's that attempted gapping in prelim test: 40229
Number of HSP's gapped (non-prelim): 7055
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)