Query 007765
Match_columns 590
No_of_seqs 462 out of 3732
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 09:56:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 3.7E-79 1.3E-83 664.0 52.2 461 111-575 45-508 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 8E-57 2.7E-61 484.6 45.7 395 101-547 11-428 (436)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.2E-56 4E-61 484.3 35.4 398 101-545 17-449 (451)
4 1ky9_A Protease DO, DEGP, HTRA 100.0 1.5E-54 5.2E-59 467.4 24.3 382 103-539 13-439 (448)
5 3stj_A Protease DEGQ; serine p 100.0 5.8E-49 2E-53 410.4 31.0 303 102-423 12-336 (345)
6 1te0_A Protease DEGS; two doma 100.0 3.7E-46 1.3E-50 386.2 28.5 299 100-421 6-315 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 3.9E-45 1.3E-49 382.9 26.4 299 102-423 16-335 (348)
8 1lcy_A HTRA2 serine protease; 100.0 3.9E-44 1.3E-48 371.9 23.1 290 103-419 15-322 (325)
9 1y8t_A Hypothetical protein RV 100.0 9.4E-43 3.2E-47 361.8 31.2 280 103-422 6-315 (324)
10 3num_A Serine protease HTRA1; 100.0 4.4E-43 1.5E-47 365.3 21.1 294 102-421 13-322 (332)
11 3sti_A Protease DEGQ; serine p 100.0 3.6E-33 1.2E-37 277.0 18.0 206 102-313 12-238 (245)
12 1l1j_A Heat shock protease HTR 100.0 4.8E-33 1.6E-37 275.6 15.5 213 103-320 4-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 4.6E-31 1.6E-35 261.6 21.6 204 100-313 17-230 (237)
14 3tjo_A Serine protease HTRA1; 100.0 2.5E-30 8.5E-35 255.1 17.8 195 102-308 30-230 (231)
15 3k6y_A Serine protease, possib 100.0 9.8E-28 3.4E-32 237.7 18.4 190 106-312 34-230 (237)
16 2as9_A Serine protease; trypsi 99.9 1.2E-22 4.1E-27 197.3 13.6 179 113-307 2-202 (210)
17 2w5e_A Putative serine proteas 99.9 1.1E-21 3.6E-26 182.0 16.1 137 138-296 19-156 (163)
18 2w7s_A Serine protease SPLA; h 99.8 1.9E-20 6.6E-25 180.1 11.2 166 129-305 12-196 (200)
19 1agj_A Epidermolytic toxin A; 99.8 5.5E-20 1.9E-24 182.4 13.0 157 140-305 55-239 (242)
20 2vid_A Serine protease SPLB; h 99.8 5.4E-19 1.8E-23 170.2 14.2 167 129-306 12-201 (204)
21 2o8l_A V8 protease, taphylococ 99.8 4E-18 1.4E-22 172.1 19.7 171 113-306 19-209 (274)
22 1wcz_A Glutamyl endopeptidase; 99.8 5E-18 1.7E-22 170.9 17.5 158 139-307 33-210 (268)
23 3rle_A Golgi reassembly-stacki 99.8 1.6E-18 5.5E-23 167.9 12.7 161 340-548 15-181 (209)
24 2l97_A HTRA, putative serine p 99.8 1.4E-19 4.7E-24 162.7 3.8 122 288-421 2-127 (134)
25 2h5c_A Alpha-lytic protease; s 99.8 1.9E-17 6.5E-22 158.6 17.5 150 142-303 18-191 (198)
26 1qtf_A Exfoliative toxin B; se 99.7 2.7E-18 9.2E-23 170.7 6.3 143 139-298 47-214 (246)
27 3gsl_A Disks large homolog 4; 99.7 1.1E-16 3.8E-21 152.9 16.1 149 340-539 34-189 (196)
28 2qa9_E Streptogrisin-B; chymot 99.7 1.4E-16 4.7E-21 151.3 15.4 158 140-304 12-181 (185)
29 1hpg_A Glutamic acid specific 99.7 3.6E-16 1.2E-20 148.6 17.1 154 140-303 12-182 (187)
30 2oua_A Serine protease, protei 99.7 4.9E-16 1.7E-20 147.6 18.0 151 141-302 15-181 (188)
31 1p1d_A PDZ45, glutamate recept 99.7 2.6E-16 8.9E-21 150.8 12.5 147 340-539 35-194 (196)
32 2ea3_A Chymotrypsin; celloulom 99.7 8E-16 2.7E-20 146.1 15.5 147 143-303 19-176 (189)
33 2qt5_A Glutamate receptor-inte 99.7 9.2E-16 3.1E-20 147.4 16.0 148 340-539 32-194 (200)
34 2pfe_A Protease A, alkaline se 99.6 2.2E-15 7.6E-20 142.6 14.4 148 143-303 18-179 (186)
35 1w9e_A Syntenin 1; cell adhesi 99.6 7E-15 2.4E-19 137.0 14.9 128 315-519 15-144 (166)
36 2sga_A Proteinase A; hydrolase 99.6 3E-15 1E-19 141.5 12.6 150 140-303 12-176 (181)
37 3r0h_A INAD, inactivation-NO-a 99.6 5.1E-15 1.8E-19 142.7 14.1 142 341-538 45-194 (206)
38 1mbm_A NSP4 proteinase, chymot 99.6 2.2E-15 7.6E-20 137.7 7.2 125 112-282 2-130 (198)
39 1ton_A Tonin; hydrolase(serine 99.5 9E-13 3.1E-17 129.6 20.4 177 130-308 12-232 (235)
40 1fxy_A Coagulation factor XA-t 99.5 7.4E-13 2.5E-17 129.6 19.5 169 139-307 24-224 (228)
41 1hj8_A Trypsin I; hydrolase, r 99.5 7.1E-13 2.4E-17 129.3 18.5 166 140-307 23-219 (222)
42 2zch_P Prostate-specific antig 99.5 7E-13 2.4E-17 130.5 17.9 170 139-308 23-234 (237)
43 4ag1_A Chymase; hydrolase-de n 99.5 6.1E-12 2.1E-16 122.7 24.2 167 139-308 27-224 (226)
44 4i8h_A Cationic trypsin, beta- 99.5 1.4E-12 4.8E-17 127.0 19.6 167 140-308 23-221 (223)
45 1cgh_A Cathepsin G; inflammati 99.5 9.9E-13 3.4E-17 128.4 18.3 167 139-307 26-222 (224)
46 3mfj_A Cationic trypsin; serin 99.5 1.5E-12 5.2E-17 127.0 18.7 166 140-307 23-220 (223)
47 1ao5_A Glandular kallikrein-13 99.5 1.3E-12 4.4E-17 128.6 18.2 167 139-307 23-233 (237)
48 2bdg_A Kallikrein-4; serine pr 99.5 1.3E-12 4.5E-17 127.4 18.0 167 139-307 23-221 (223)
49 1iau_A Granzyme B; hydrolase-h 99.5 4.7E-12 1.6E-16 123.8 21.9 166 140-307 27-224 (227)
50 1npm_A Neuropsin; serine prote 99.5 1.7E-12 5.7E-17 126.8 18.7 166 139-306 23-223 (225)
51 1pq7_A Trypsin; ultra-high res 99.5 1.2E-12 4E-17 127.8 17.2 167 139-305 23-222 (224)
52 1a7s_A Heparin binding protein 99.5 3.2E-12 1.1E-16 124.8 20.3 166 139-309 23-219 (225)
53 1fuj_A PR3, myeloblastin; hydr 99.5 2.5E-12 8.7E-17 125.0 19.1 162 139-306 26-219 (221)
54 3rp2_A RAT MAST cell protease 99.5 6.4E-12 2.2E-16 122.3 22.0 165 139-306 27-222 (224)
55 2psx_A Kallikrein-5; zinc inhi 99.4 3.8E-12 1.3E-16 124.5 19.8 167 139-307 24-223 (227)
56 3s9c_A Vipera russelli protein 99.4 4.2E-12 1.4E-16 124.5 20.1 171 140-310 26-227 (234)
57 2qxi_A Kallikrein-7; S1 pocket 99.4 2.7E-12 9.3E-17 125.3 18.6 165 141-307 25-220 (224)
58 1lo6_A Kallikrein 6, HK6; seri 99.4 3.9E-12 1.3E-16 124.1 19.4 167 139-307 23-220 (223)
59 1azz_A Collagenase; complex (s 99.4 1.2E-12 4.1E-17 128.0 15.6 168 139-307 23-222 (226)
60 1aut_C Activated protein C; se 99.4 4.3E-12 1.5E-16 125.9 19.8 170 139-308 24-239 (250)
61 1gvz_A Kallikrein-1E2; antigen 99.4 1.8E-12 6.3E-17 127.5 16.9 166 140-307 24-233 (237)
62 3s69_A Thrombin-like enzyme de 99.4 5.1E-12 1.8E-16 123.8 19.7 172 139-310 23-227 (234)
63 2aiq_A Protein C activator; sn 99.4 5.3E-12 1.8E-16 123.8 19.8 169 140-309 23-223 (231)
64 3fzz_A Granzyme C; hydrolase, 99.4 8.5E-12 2.9E-16 121.7 21.2 167 139-307 27-225 (227)
65 1sgf_A 7S NGF, nerve growth fa 99.4 2E-12 6.7E-17 127.6 16.3 167 140-308 27-237 (240)
66 4e7n_A Snake-venom thrombin-li 99.4 6.3E-12 2.1E-16 123.5 19.9 171 139-309 25-230 (238)
67 1p3c_A Glutamyl-endopeptidase; 99.4 7.3E-13 2.5E-17 128.4 12.8 157 139-306 29-212 (215)
68 1mza_A Pro-granzyme K; apoptos 99.4 3.5E-12 1.2E-16 125.7 17.7 168 139-306 25-233 (240)
69 2z7f_E Leukocyte elastase; ser 99.4 2.5E-12 8.7E-17 124.9 16.3 162 139-306 23-216 (218)
70 1euf_A Duodenase; serine prote 99.4 1.1E-11 3.9E-16 121.0 20.7 166 139-306 26-222 (227)
71 1si5_H Scatter factor, hepatoc 99.4 2.5E-11 8.6E-16 119.6 23.0 170 139-308 22-227 (240)
72 1eq9_A Chymotrypsin; FIRE ANT, 99.4 7.6E-12 2.6E-16 121.9 19.0 165 140-305 24-218 (222)
73 2xw9_A Complement factor D; im 99.4 9.9E-12 3.4E-16 121.4 19.7 168 139-306 23-226 (228)
74 1spj_A Kallikrein 1; serine pr 99.4 6.9E-12 2.4E-16 123.4 18.6 166 140-307 24-234 (238)
75 2asu_B Hepatocyte growth facto 99.4 1.2E-11 4.2E-16 121.4 20.3 169 139-307 21-225 (234)
76 3h7t_A Group 3 allergen smipp- 99.4 7E-12 2.4E-16 122.7 18.4 170 139-308 23-229 (235)
77 2qy0_B Complement C1R subcompo 99.4 3.3E-12 1.1E-16 126.0 15.2 178 130-307 12-238 (242)
78 3gov_B MAsp-1; complement, ser 99.4 2.1E-11 7.1E-16 120.6 20.9 169 139-307 24-247 (251)
79 2pzd_A Serine protease HTRA2; 99.4 5.1E-13 1.8E-17 116.0 8.0 97 310-421 1-103 (113)
80 1orf_A Granzyme A; hydrolase-h 99.4 1.7E-11 5.9E-16 120.3 19.9 168 139-307 23-230 (234)
81 1bru_P Elastase, PPE; serine p 99.4 3.1E-11 1.1E-15 119.0 21.7 168 140-307 28-238 (241)
82 2f91_A Hepatopancreas trypsin; 99.4 1.2E-11 4.2E-16 121.6 18.3 165 141-305 29-234 (237)
83 1gvk_B Elastase 1, peptide inh 99.4 2E-11 6.8E-16 120.3 19.3 168 140-307 28-237 (240)
84 3fan_A Non-structural protein; 99.4 1E-12 3.4E-17 122.3 9.0 118 138-285 28-147 (213)
85 1ym0_A Fibrinotic enzyme compo 99.4 1.1E-11 3.9E-16 121.8 17.3 170 139-308 25-236 (238)
86 1t8o_A Chymotrypsin A; chymotr 99.4 1.9E-11 6.3E-16 121.0 18.9 168 139-307 39-242 (245)
87 2zgc_A Granzyme M; serine prot 99.4 2.7E-11 9.3E-16 119.5 19.9 169 140-308 24-229 (240)
88 2p3w_A Probable serine proteas 99.4 4.9E-13 1.7E-17 115.9 6.4 97 310-421 1-103 (112)
89 3suz_A Amyloid beta A4 precurs 99.4 2.6E-13 8.7E-18 143.4 5.3 135 341-536 232-370 (388)
90 1elt_A Elastase; serine protei 99.4 2.4E-11 8.4E-16 119.3 19.2 166 140-305 28-234 (236)
91 2hlc_A Collagenase; serine pro 99.4 1.9E-11 6.7E-16 119.6 18.3 169 139-307 27-226 (230)
92 3ncl_A Suppressor of tumorigen 99.4 3E-11 1E-15 118.8 19.7 167 140-306 25-238 (241)
93 2jkh_A Activated factor XA hea 99.4 2.1E-11 7.2E-16 120.2 18.1 169 139-307 24-232 (241)
94 3beu_A Trypsin, SGT; beta shee 99.4 4.5E-11 1.5E-15 116.4 20.1 173 130-307 12-221 (224)
95 1m9u_A Earthworm fibrinolytic 99.4 2.7E-11 9.3E-16 119.3 18.8 166 140-305 27-239 (241)
96 2xkx_A Disks large homolog 4; 99.4 4.2E-12 1.4E-16 144.6 14.7 149 340-539 88-243 (721)
97 3h7o_A Group 3 allergen smipp- 99.3 1.3E-11 4.5E-16 120.4 15.7 167 141-307 27-225 (228)
98 3tvj_B Mannan-binding lectin s 99.3 1.4E-11 4.9E-16 121.1 16.0 177 131-307 13-239 (242)
99 1ddj_A Plasminogen; catalytic 99.3 7.2E-11 2.4E-15 116.9 21.0 170 139-308 41-245 (247)
100 3bg8_A Coagulation factor XIA 99.3 2E-11 6.9E-16 120.1 17.0 169 139-307 26-235 (238)
101 3cp7_A Alkaline serine proteas 99.3 2.6E-11 8.9E-16 117.9 16.9 175 113-307 6-215 (218)
102 2r0l_A Hepatocyte growth facto 99.3 1.1E-10 3.9E-15 115.4 21.7 169 140-308 23-239 (248)
103 2any_A Kininogenin, plasma kal 99.3 6.4E-11 2.2E-15 116.7 19.7 169 139-307 26-235 (241)
104 3gyl_B Prostasin; ENAC, zymoge 99.3 4.9E-11 1.7E-15 118.8 18.9 169 139-307 23-241 (261)
105 2oq5_A Transmembrane protease, 99.3 1.3E-10 4.6E-15 113.7 21.5 168 139-306 23-229 (232)
106 1rtf_B (TC)-T-PA, two chain ti 99.3 7.9E-11 2.7E-15 116.7 19.5 168 139-306 29-249 (252)
107 2wph_S Coagulation factor IXA 99.3 4.1E-11 1.4E-15 117.6 17.1 168 139-306 23-231 (235)
108 1md8_A C1R complement serine p 99.3 2.3E-11 8E-16 125.7 15.9 179 129-307 100-327 (329)
109 2bdy_A Thrombin; thrombin, com 99.3 3.1E-11 1.1E-15 122.4 16.5 169 139-307 55-284 (289)
110 3rm2_H Thrombin heavy chain; s 99.3 5E-11 1.7E-15 118.4 17.5 168 140-307 26-254 (259)
111 1pyt_D TC, PCPA-TC, chymotryps 99.3 7.9E-11 2.7E-15 116.9 18.7 166 140-305 41-247 (251)
112 3mhw_U Urokinase-type plasmino 99.3 1.5E-10 5.3E-15 114.1 20.7 168 139-306 28-244 (247)
113 2olg_A Pro-phenoloxidase activ 99.3 1.6E-10 5.4E-15 116.5 20.7 167 139-305 50-274 (278)
114 3f1s_B Vitamin K-dependent pro 99.3 2.3E-11 7.9E-16 123.1 14.5 170 139-308 76-276 (283)
115 2bz6_H Blood coagulation facto 99.3 5.7E-11 1.9E-15 118.0 17.0 171 139-309 23-241 (254)
116 4dgj_A Enteropeptidase catalyt 99.3 8E-11 2.7E-15 115.4 17.6 167 139-305 23-232 (235)
117 2f9n_A Alpha I tryptase; serin 99.3 3.4E-11 1.2E-15 119.0 14.9 167 140-306 27-240 (245)
118 2jde_A Urokinase-type plasmino 99.3 2.5E-10 8.5E-15 114.8 21.4 167 140-306 52-267 (276)
119 1yc0_A Hepatocyte growth facto 99.3 2.5E-10 8.5E-15 115.4 21.2 168 140-307 58-273 (283)
120 1fon_A Procarboxypeptidase A-S 99.3 2.4E-11 8.3E-16 119.7 12.7 168 140-307 26-237 (240)
121 2xkx_A Disks large homolog 4; 99.3 4E-11 1.4E-15 136.5 15.9 172 340-539 183-390 (721)
122 1fiw_A Beta-acrosin heavy chai 99.3 2.6E-10 8.9E-15 115.7 20.1 168 140-307 30-248 (290)
123 4f4o_C Haptoglobin; globin fol 99.3 6.4E-11 2.2E-15 123.2 15.7 179 128-307 112-344 (347)
124 1gpz_A Complement C1R componen 99.2 8.2E-11 2.8E-15 124.9 15.9 180 127-306 166-394 (399)
125 1z8g_A Serine protease hepsin; 99.2 1.9E-10 6.7E-15 120.9 18.0 170 139-308 140-360 (372)
126 3h5c_B Vitamin K-dependent pro 99.2 1.5E-10 5.1E-15 119.0 16.3 168 139-306 117-315 (317)
127 1elv_A Complement C1S componen 99.2 1.5E-10 5E-15 119.9 15.5 177 130-308 94-325 (333)
128 1zyo_A Serine protease; beta-b 99.2 1.2E-10 4.2E-15 109.6 13.5 164 112-303 14-186 (191)
129 1zjk_A Mannan-binding lectin s 99.2 1.7E-10 5.7E-15 122.7 16.2 179 129-307 172-400 (403)
130 2i4s_A General secretion pathw 99.2 5.4E-11 1.8E-15 101.8 9.6 101 296-418 4-105 (105)
131 3id1_A Regulator of sigma E pr 99.2 3.3E-11 1.1E-15 101.1 7.5 86 343-444 4-92 (95)
132 2vnt_A Urokinase-type plasmino 99.2 1.5E-09 5E-14 109.0 20.4 186 113-308 35-269 (276)
133 2b9l_A Prophenoloxidase activa 99.2 4.5E-10 1.6E-14 118.8 17.1 171 139-309 161-384 (394)
134 2xxl_A GRAM-positive specific 99.1 9.8E-10 3.3E-14 116.8 18.1 170 139-308 145-373 (408)
135 3nxp_A Prethrombin-1; alloster 99.1 1.2E-10 4.2E-15 124.5 10.2 180 128-307 175-419 (424)
136 2vz5_A TAX1-binding protein 3; 99.1 1.1E-10 3.8E-15 105.0 8.2 95 315-420 37-135 (139)
137 4dur_A Plasminogen, serine pro 99.1 2.4E-09 8.2E-14 122.2 19.6 170 139-308 585-789 (791)
138 3i18_A LMO2051 protein; alpha- 99.1 3.1E-10 1.1E-14 96.1 8.8 73 340-422 6-78 (100)
139 3hrz_D Complement factor B; se 99.1 8.3E-10 2.8E-14 126.4 14.2 172 138-309 482-733 (741)
140 2i6v_A General secretion pathw 99.0 2.9E-10 1E-14 93.6 6.2 68 341-418 19-87 (87)
141 2kl1_A YLBL protein; structure 99.0 3.5E-10 1.2E-14 94.6 5.7 73 340-422 4-76 (94)
142 2f83_A Coagulation factor XI; 99.0 2.8E-09 9.4E-14 119.4 14.1 167 139-305 413-620 (625)
143 1rrk_A Complement factor B; BB 99.0 3.6E-09 1.2E-13 115.3 14.6 73 139-211 241-333 (497)
144 2kjp_A Uncharacterized protein 99.0 1.1E-10 3.9E-15 97.0 1.4 72 341-422 1-72 (91)
145 2eaq_A LIM domain only protein 99.0 4.3E-10 1.5E-14 93.1 4.8 61 340-410 27-90 (90)
146 2odp_A Complement C2; C3/C5 co 98.9 8.8E-10 3E-14 120.6 8.4 178 130-307 235-500 (509)
147 1arb_A Achromobacter protease 98.9 5.1E-09 1.7E-13 104.6 13.0 143 111-284 20-213 (268)
148 1uit_A Human discs large 5 pro 98.9 3.5E-10 1.2E-14 98.6 3.9 90 308-413 8-105 (117)
149 2xrc_A Human complement factor 98.9 1.1E-08 3.6E-13 113.4 14.9 178 129-306 332-554 (565)
150 2w4f_A Protein LAP4; structura 98.9 3.6E-09 1.2E-13 88.8 7.5 82 315-411 13-95 (97)
151 3sfj_A TAX1-binding protein 3; 98.8 9.5E-09 3.2E-13 87.3 8.9 82 315-408 18-104 (104)
152 2l97_A HTRA, putative serine p 98.8 1.2E-08 4.1E-13 91.1 9.9 91 438-548 29-124 (134)
153 1x5q_A LAP4 protein; PDZ domai 98.8 6.8E-09 2.3E-13 89.3 7.8 83 315-412 25-108 (110)
154 2eeh_A PDZ domain-containing p 98.8 6.8E-09 2.3E-13 87.7 7.2 75 315-411 21-96 (100)
155 2zpm_A Regulator of sigma E pr 98.8 4.3E-09 1.5E-13 87.2 5.4 66 343-419 6-72 (91)
156 1uf1_A KIAA1526 protein; PDZ d 98.8 6.2E-09 2.1E-13 92.2 6.8 97 395-539 5-103 (128)
157 2pkt_A PDZ and LIM domain prot 98.8 5.3E-09 1.8E-13 86.7 5.7 62 341-412 27-89 (91)
158 3cyy_A Tight junction protein 98.8 4.3E-09 1.5E-13 87.3 4.8 77 327-416 10-90 (92)
159 2dls_A PDZ-rhogef, RHO guanine 98.7 1.7E-08 5.9E-13 84.0 7.4 59 341-410 29-88 (93)
160 2rcz_A Tight junction protein 98.7 6.6E-09 2.3E-13 83.8 4.7 77 319-409 1-81 (81)
161 2pzd_A Serine protease HTRA2; 98.7 3.3E-08 1.1E-12 85.4 9.3 94 438-548 6-100 (113)
162 2fcf_A Multiple PDZ domain pro 98.7 1.1E-08 3.7E-13 86.8 6.1 82 315-410 15-100 (103)
163 2vsp_A PDZ domain-containing p 98.7 7.7E-09 2.6E-13 85.7 4.8 61 340-412 26-89 (91)
164 2v90_A PDZ domain-containing p 98.7 6.4E-09 2.2E-13 87.1 4.1 77 317-412 15-92 (96)
165 1qau_A Neuronal nitric oxide s 98.7 2.5E-08 8.4E-13 86.0 7.8 83 316-421 13-99 (112)
166 2hga_A Conserved protein MTH13 98.7 2.1E-08 7.2E-13 88.3 7.3 67 340-420 24-90 (125)
167 2p3w_A Probable serine proteas 98.7 2.7E-08 9.1E-13 85.8 7.8 93 438-547 6-99 (112)
168 2yub_A LIMK-2, LIM domain kina 98.7 5.8E-09 2E-13 90.9 3.6 63 340-414 43-110 (118)
169 1uez_A KIAA1526 protein; PDZ d 98.7 1.9E-08 6.3E-13 85.1 6.0 73 316-410 21-94 (101)
170 3rle_A Golgi reassembly-stacki 98.7 2.9E-08 1E-12 95.5 8.1 85 315-419 94-180 (209)
171 3stj_A Protease DEGQ; serine p 98.7 4.1E-08 1.4E-12 101.8 9.5 91 437-548 239-331 (345)
172 4fgm_A Aminopeptidase N family 98.7 6.8E-08 2.3E-12 107.1 11.3 79 332-421 485-566 (597)
173 3tsv_A Tight junction protein 98.7 3E-08 1E-12 87.3 6.8 61 341-411 51-114 (124)
174 2he4_A Na(+)/H(+) exchange reg 98.6 7.1E-08 2.4E-12 79.6 8.3 60 341-410 28-88 (90)
175 3bpu_A Membrane-associated gua 98.6 5.1E-08 1.7E-12 80.1 7.3 60 341-410 27-87 (88)
176 2iwq_A Multiple PDZ domain pro 98.6 3.9E-08 1.3E-12 86.4 6.9 82 315-410 35-120 (123)
177 1yph_C Chymotrypsin A, chain B 98.6 1.5E-07 5E-12 83.5 10.7 86 139-225 24-128 (131)
178 2h2b_A Tight junction protein 98.6 5E-08 1.7E-12 83.3 7.2 61 340-411 38-99 (107)
179 1wh1_A KIAA1095 protein; PDZ d 98.6 1.5E-08 5.2E-13 89.1 3.9 80 315-414 31-112 (124)
180 3i18_A LMO2051 protein; alpha- 98.6 7.9E-08 2.7E-12 81.1 8.2 67 480-547 5-73 (100)
181 2pka_B Kallikrein A; serine pr 98.6 3.1E-07 1.1E-11 83.6 12.8 123 185-307 6-148 (152)
182 1uf1_A KIAA1526 protein; PDZ d 98.6 2.2E-08 7.6E-13 88.6 5.0 70 341-421 46-116 (128)
183 2kl1_A YLBL protein; structure 98.6 3.9E-08 1.3E-12 82.0 6.1 68 480-548 3-72 (94)
184 2edz_A PDZ domain-containing p 98.6 2.5E-09 8.6E-14 92.7 -1.4 68 340-417 37-105 (114)
185 2uzc_A Human pdlim5, PDZ and L 98.6 5.6E-08 1.9E-12 79.8 6.8 60 341-410 27-87 (88)
186 3mmg_A Nuclear inclusion prote 98.6 1.8E-06 6.1E-11 82.8 18.0 167 111-305 13-193 (241)
187 2jxo_A Ezrin-radixin-moesin-bi 98.6 1.9E-08 6.5E-13 84.5 3.9 60 340-410 32-94 (98)
188 1vb7_A PDZ and LIM domain 2; P 98.6 3.7E-08 1.3E-12 82.1 5.5 59 341-411 30-91 (94)
189 2pa1_A PDZ and LIM domain prot 98.6 4.7E-08 1.6E-12 80.1 5.9 58 341-410 26-86 (87)
190 2kjp_A Uncharacterized protein 98.6 9E-09 3.1E-13 85.4 1.3 64 483-547 2-67 (91)
191 2f5y_A Regulator of G-protein 98.6 1.3E-07 4.3E-12 78.3 8.1 62 341-412 24-86 (91)
192 1rgw_A ZAsp protein; PDZ, cyph 98.6 6.5E-08 2.2E-12 78.8 5.8 60 341-410 25-85 (85)
193 2koj_A Partitioning defective 98.6 1.5E-07 5.2E-12 80.8 8.4 80 316-411 22-103 (111)
194 1v5l_A PDZ and LIM domain 3; a 98.6 2.4E-08 8.3E-13 84.7 3.2 74 315-411 14-90 (103)
195 1te0_A Protease DEGS; two doma 98.6 8.9E-08 3E-12 98.3 8.0 89 438-547 221-311 (318)
196 2vwr_A Ligand of NUMB protein 98.5 1.3E-07 4.4E-12 78.9 7.2 61 340-410 28-90 (95)
197 1m5z_A GRIP, AMPA receptor int 98.5 1.4E-07 4.8E-12 77.9 7.4 58 341-408 32-90 (91)
198 2i6v_A General secretion pathw 98.5 1.1E-07 3.7E-12 78.0 6.6 64 482-545 19-84 (87)
199 2awx_A Synapse associated prot 98.5 1.3E-07 4.5E-12 80.4 7.3 70 340-419 32-103 (105)
200 3id1_A Regulator of sigma E pr 98.5 1E-07 3.6E-12 79.6 6.5 55 485-539 5-60 (95)
201 2q3g_A PDZ and LIM domain prot 98.5 1.1E-07 3.8E-12 78.2 6.5 60 341-410 27-87 (89)
202 1wf7_A Enigma homologue protei 98.5 2E-08 7E-13 85.2 1.9 67 341-417 29-96 (103)
203 2kom_A Partitioning defective 98.5 1.8E-07 6.2E-12 81.8 8.0 63 340-410 57-121 (121)
204 1ihj_A INAD; intermolecular di 98.5 1.2E-07 4.1E-12 79.5 6.5 61 340-410 36-98 (98)
205 2yt7_A Amyloid beta A4 precurs 98.5 1.1E-07 3.9E-12 80.3 6.4 74 316-408 21-98 (101)
206 2eeg_A PDZ and LIM domain prot 98.5 8E-08 2.7E-12 80.0 5.2 60 341-410 32-92 (94)
207 1b8q_A Protein (neuronal nitri 98.5 4.3E-08 1.5E-12 86.5 3.6 80 316-418 20-103 (127)
208 2rcz_A Tight junction protein 98.5 6.6E-08 2.3E-12 77.8 4.3 57 482-539 21-80 (81)
209 3khf_A Microtubule-associated 98.5 9.1E-08 3.1E-12 80.4 5.3 61 341-411 34-95 (99)
210 3ngh_A PDZ domain-containing p 98.5 8E-08 2.7E-12 81.9 5.0 63 340-412 25-88 (106)
211 4amh_A Disks large homolog 1; 98.5 2.5E-07 8.5E-12 78.9 8.0 70 340-419 31-103 (106)
212 2opg_A Multiple PDZ domain pro 98.5 2.4E-07 8.2E-12 77.6 7.8 63 341-413 30-94 (98)
213 2jil_A GRIP1 protein, glutamat 98.5 6.5E-08 2.2E-12 81.0 4.3 61 340-412 31-95 (97)
214 1nf3_C PAR-6B; semi-CRIB motif 98.5 3.8E-08 1.3E-12 87.1 2.8 82 317-410 43-126 (128)
215 1wi2_A Riken cDNA 2700099C19; 98.5 1.6E-07 5.5E-12 79.7 6.5 71 316-410 27-100 (104)
216 1kwa_A Hcask/LIN-2 protein; PD 98.5 1.5E-07 5.1E-12 77.4 6.1 58 341-410 25-86 (88)
217 1x5n_A Harmonin; PDZ domain, u 98.5 2.7E-08 9.4E-13 86.0 1.4 64 340-414 40-105 (114)
218 2fcf_A Multiple PDZ domain pro 98.5 2.5E-07 8.6E-12 78.2 7.4 59 480-539 37-98 (103)
219 2pa1_A PDZ and LIM domain prot 98.5 1.9E-07 6.5E-12 76.4 6.3 57 482-539 26-84 (87)
220 1wh1_A KIAA1095 protein; PDZ d 98.5 1.4E-07 4.8E-12 82.9 5.7 59 481-539 47-106 (124)
221 3r68_A Na(+)/H(+) exchange reg 98.5 2.6E-07 8.8E-12 76.9 7.1 61 341-411 29-90 (95)
222 3pv2_A DEGQ; trypsin fold, PDZ 98.5 3.8E-07 1.3E-11 97.9 10.2 90 437-547 257-349 (451)
223 2zpm_A Regulator of sigma E pr 98.5 1.4E-07 4.7E-12 78.0 5.1 64 485-548 7-71 (91)
224 2v90_A PDZ domain-containing p 98.5 2.6E-07 8.8E-12 77.2 6.7 59 480-539 28-88 (96)
225 1n7e_A AMPA receptor interacti 98.4 5.1E-07 1.8E-11 75.5 8.4 61 341-411 30-92 (97)
226 2e7k_A Maguk P55 subfamily mem 98.4 1.9E-07 6.5E-12 77.3 5.5 67 316-408 18-87 (91)
227 2fe5_A Presynaptic protein SAP 98.4 3.9E-07 1.3E-11 75.6 7.3 61 340-410 32-94 (94)
228 2qkv_A Inactivation-NO-after-p 98.4 4.8E-07 1.7E-11 75.6 7.8 58 341-408 31-90 (96)
229 2ego_A General receptor for ph 98.4 3.2E-07 1.1E-11 76.7 6.7 56 341-408 37-95 (96)
230 2iwn_A Multiple PDZ domain pro 98.4 4.2E-07 1.4E-11 75.8 7.4 79 315-410 14-94 (97)
231 2eaq_A LIM domain only protein 98.4 1.5E-07 5.1E-12 77.6 4.5 58 482-539 28-88 (90)
232 2iwq_A Multiple PDZ domain pro 98.4 5.2E-07 1.8E-11 79.1 8.0 59 480-539 57-118 (123)
233 2kv8_A RGS12, regulator of G-p 98.4 1.6E-07 5.4E-12 76.2 4.3 58 341-408 23-81 (83)
234 2d90_A PDZ domain containing p 98.4 2.5E-07 8.6E-12 78.2 5.7 62 340-411 29-91 (102)
235 2djt_A Unnamed protein product 98.4 4.6E-07 1.6E-11 76.8 7.3 62 340-411 37-100 (104)
236 1va8_A Maguk P55 subfamily mem 98.4 3.2E-07 1.1E-11 79.2 6.3 61 341-411 48-110 (113)
237 1lcy_A HTRA2 serine protease; 98.4 7.5E-07 2.6E-11 91.6 10.2 94 438-548 227-321 (325)
238 1g9o_A NHE-RF; PDZ domain, com 98.4 4.7E-07 1.6E-11 74.7 7.1 36 341-376 27-63 (91)
239 2jxo_A Ezrin-radixin-moesin-bi 98.4 2E-07 6.8E-12 78.2 4.8 58 481-538 32-91 (98)
240 1wif_A RSGI RUH-020, riken cDN 98.4 1.7E-07 5.8E-12 82.4 4.6 58 341-408 49-110 (126)
241 3axa_A Afadin, nectin-3, prote 98.4 6.7E-07 2.3E-11 76.1 8.2 62 340-411 37-100 (106)
242 2vsp_A PDZ domain-containing p 98.4 1.6E-07 5.4E-12 77.7 4.1 58 481-539 26-85 (91)
243 2ejy_A 55 kDa erythrocyte memb 98.4 4.1E-07 1.4E-11 76.2 6.5 56 341-408 36-95 (97)
244 1y7n_A Amyloid beta A4 precurs 98.4 2.5E-07 8.7E-12 76.4 5.2 68 327-408 19-89 (90)
245 2jil_A GRIP1 protein, glutamat 98.4 3.2E-07 1.1E-11 76.7 5.8 59 480-539 30-91 (97)
246 1ujv_A Membrane associated gua 98.4 6.1E-07 2.1E-11 75.0 7.4 60 341-410 32-92 (96)
247 2pkt_A PDZ and LIM domain prot 98.4 2E-07 6.7E-12 77.0 4.4 57 482-539 27-85 (91)
248 4a8c_A Periplasmic PH-dependen 98.4 7.7E-07 2.6E-11 95.3 10.1 87 438-545 240-328 (436)
249 2uzc_A Human pdlim5, PDZ and L 98.4 3.6E-07 1.2E-11 74.9 5.9 58 481-539 26-85 (88)
250 2vsv_A Rhophilin-2; scaffold p 98.4 4.2E-07 1.4E-11 77.9 6.4 58 341-409 44-104 (109)
251 3cyy_A Tight junction protein 98.4 4.3E-07 1.5E-11 75.0 6.4 57 482-539 23-82 (92)
252 2i04_A Membrane-associated gua 98.4 4.6E-07 1.6E-11 73.8 6.4 60 340-407 24-85 (85)
253 3kzd_A TIAM-1, T-lymphoma inva 98.4 6.2E-07 2.1E-11 74.4 7.2 51 316-376 20-71 (94)
254 2vz5_A TAX1-binding protein 3; 98.4 3E-07 1E-11 82.4 5.7 60 480-539 62-123 (139)
255 3qik_A Phosphatidylinositol 3, 98.4 2.6E-07 9E-12 77.2 4.9 57 340-406 38-98 (101)
256 2qg1_A Multiple PDZ domain pro 98.4 6.3E-07 2.1E-11 74.1 7.2 61 340-410 28-90 (92)
257 3cbz_A Dishevelled-2; PDZ doma 98.4 5.4E-07 1.9E-11 77.0 6.9 60 480-539 31-95 (108)
258 2kjd_A Sodium/hydrogen exchang 98.4 2.3E-07 7.9E-12 81.8 4.7 63 340-413 32-97 (128)
259 2i04_A Membrane-associated gua 98.4 6E-07 2.1E-11 73.0 6.8 58 481-538 24-85 (85)
260 2jik_A Synaptojanin-2 binding 98.4 6.3E-07 2.2E-11 75.5 7.1 61 340-410 36-98 (101)
261 2la8_A Inactivation-NO-after-p 98.4 5E-07 1.7E-11 77.0 6.5 58 341-408 25-84 (106)
262 2vsv_A Rhophilin-2; scaffold p 98.4 4.1E-07 1.4E-11 77.9 6.0 56 483-538 45-102 (109)
263 1um1_A KIAA1849 protein, RSGI 98.4 7.9E-08 2.7E-12 82.5 1.4 67 340-416 35-103 (110)
264 1kwa_A Hcask/LIN-2 protein; PD 98.4 4.7E-07 1.6E-11 74.4 6.0 57 482-539 25-84 (88)
265 2he4_A Na(+)/H(+) exchange reg 98.4 3.6E-07 1.2E-11 75.3 5.3 58 481-539 27-86 (90)
266 2iwo_A Multiple PDZ domain pro 98.4 1.5E-07 5.1E-12 82.2 3.1 63 341-413 53-117 (120)
267 1ueq_A Membrane associated gua 98.4 7.1E-07 2.4E-11 78.2 7.4 62 481-542 43-108 (123)
268 2jre_A C60-1 PDZ domain peptid 98.4 2.5E-07 8.4E-12 79.1 4.2 62 340-411 43-106 (108)
269 3sfj_A TAX1-binding protein 3; 98.3 4.6E-07 1.6E-11 76.7 5.9 59 480-538 43-103 (104)
270 3qik_A Phosphatidylinositol 3, 98.3 6.6E-07 2.3E-11 74.8 6.6 56 482-537 39-98 (101)
271 3i4w_A Disks large homolog 4; 98.3 5.8E-07 2E-11 76.1 6.5 60 341-410 35-96 (104)
272 1whd_A RGS3, regulator of G-pr 98.3 4.1E-07 1.4E-11 76.6 5.4 59 341-409 36-95 (100)
273 2i4s_A General secretion pathw 98.3 5.3E-07 1.8E-11 76.7 6.0 64 482-545 37-102 (105)
274 1v5l_A PDZ and LIM domain 3; a 98.3 3.6E-07 1.2E-11 77.4 4.9 57 482-539 29-87 (103)
275 1ueq_A Membrane associated gua 98.3 6.9E-07 2.4E-11 78.3 6.9 62 340-409 43-106 (123)
276 1tp5_A Presynaptic density pro 98.3 7.3E-07 2.5E-11 77.5 7.0 60 341-410 38-99 (119)
277 1vb7_A PDZ and LIM domain 2; P 98.3 3.4E-07 1.2E-11 76.1 4.6 58 481-539 29-88 (94)
278 2r4h_A Membrane-associated gua 98.3 8.1E-07 2.8E-11 76.5 7.0 61 341-411 49-111 (112)
279 1ihj_A INAD; intermolecular di 98.3 5E-07 1.7E-11 75.6 5.6 59 480-539 35-96 (98)
280 2hga_A Conserved protein MTH13 98.3 1.6E-06 5.3E-11 76.2 8.9 67 480-548 23-90 (125)
281 2dmz_A INAD-like protein; PDZ 98.3 3.8E-07 1.3E-11 80.6 5.0 79 316-412 27-109 (129)
282 2o2t_A Multiple PDZ domain pro 98.3 1E-07 3.6E-12 82.7 1.2 97 296-412 5-113 (117)
283 1v5q_A GRIP1 homolog, glutamat 98.3 3.9E-07 1.3E-11 79.8 4.9 61 341-411 45-109 (122)
284 2i1n_A Discs, large homolog 3; 98.3 7.7E-07 2.6E-11 75.1 6.4 63 340-412 33-97 (102)
285 2yt7_A Amyloid beta A4 precurs 98.3 1.1E-06 3.6E-11 74.2 7.3 58 482-539 37-98 (101)
286 1d5g_A Human phosphatase HPTP1 98.3 8.4E-07 2.9E-11 73.9 6.6 61 340-410 32-94 (96)
287 1q3o_A Shank1; PDZ, GKAP, pept 98.3 9.3E-07 3.2E-11 75.6 6.9 58 341-408 45-103 (109)
288 2fne_A Multiple PDZ domain pro 98.3 7.5E-07 2.6E-11 77.3 6.2 61 341-411 53-115 (117)
289 3tsv_A Tight junction protein 98.3 5.7E-07 1.9E-11 79.0 5.3 58 482-539 51-111 (124)
290 2ejy_A 55 kDa erythrocyte memb 98.3 5.9E-07 2E-11 75.2 5.2 56 482-538 36-94 (97)
291 1qau_A Neuronal nitric oxide s 98.3 1.3E-06 4.3E-11 75.1 7.4 59 481-539 25-86 (112)
292 2qbw_A PDZ-fibronectin fusion 98.3 1.8E-06 6.1E-11 81.8 9.1 72 340-421 23-97 (195)
293 1uep_A Membrane associated gua 98.3 2.8E-07 9.5E-12 78.1 3.1 63 340-410 33-97 (103)
294 2d92_A INAD-like protein; PDZ 98.3 9.1E-07 3.1E-11 75.6 6.3 60 480-539 42-104 (108)
295 2yub_A LIMK-2, LIM domain kina 98.3 5.1E-07 1.7E-11 78.5 4.8 58 481-539 43-104 (118)
296 1uhp_A Hypothetical protein KI 98.3 9.7E-07 3.3E-11 75.2 6.4 60 340-409 40-101 (107)
297 2eeh_A PDZ domain-containing p 98.3 1.3E-06 4.4E-11 73.5 7.1 56 482-539 36-93 (100)
298 2ego_A General receptor for ph 98.3 1.1E-06 3.9E-11 73.2 6.7 58 481-539 36-95 (96)
299 2kpk_A Membrane-associated gua 98.3 2.2E-06 7.4E-11 75.8 8.8 61 481-541 42-106 (129)
300 3khf_A Microtubule-associated 98.3 1.1E-06 3.7E-11 73.7 6.4 57 482-539 34-92 (99)
301 1vae_A Rhophilin 2, rhophilin, 98.3 5.1E-07 1.7E-11 77.6 4.3 56 341-407 36-94 (111)
302 2byg_A Channel associated prot 98.3 9.7E-07 3.3E-11 76.6 6.1 61 340-410 53-115 (117)
303 1wfg_A Regulating synaptic mem 98.3 4.1E-06 1.4E-10 74.1 10.3 60 480-539 63-126 (131)
304 1vae_A Rhophilin 2, rhophilin, 98.3 4.7E-07 1.6E-11 77.9 3.9 56 483-538 37-94 (111)
305 1wfg_A Regulating synaptic mem 98.3 1.2E-06 4.1E-11 77.7 6.7 62 341-410 65-128 (131)
306 1v62_A KIAA1719 protein; struc 98.3 8.2E-07 2.8E-11 77.1 5.5 59 341-411 42-104 (117)
307 2q9v_A Membrane-associated gua 98.3 6.1E-07 2.1E-11 73.8 4.4 61 341-409 27-89 (90)
308 2eei_A PDZ domain-containing p 98.3 5.5E-07 1.9E-11 76.6 4.2 62 340-411 31-93 (106)
309 2q3g_A PDZ and LIM domain prot 98.3 9.4E-07 3.2E-11 72.6 5.5 58 481-539 26-85 (89)
310 1q7x_A PDZ2B domain of PTP-BAS 98.3 1.2E-06 4.2E-11 74.7 6.4 62 340-411 41-104 (108)
311 1uew_A Membrane associated gua 98.2 4.8E-07 1.6E-11 78.1 3.8 58 342-411 44-105 (114)
312 1wi2_A Riken cDNA 2700099C19; 98.2 1.3E-06 4.3E-11 74.1 6.3 56 482-539 41-98 (104)
313 3cbz_A Dishevelled-2; PDZ doma 98.2 1E-06 3.4E-11 75.3 5.7 64 340-411 32-98 (108)
314 1uep_A Membrane associated gua 98.2 6.9E-07 2.4E-11 75.6 4.6 59 481-539 33-95 (103)
315 1wfv_A Membrane associated gua 98.2 6.1E-07 2.1E-11 75.8 4.2 61 341-411 36-98 (103)
316 1v5q_A GRIP1 homolog, glutamat 98.2 8.6E-07 2.9E-11 77.5 5.3 58 482-539 45-106 (122)
317 2daz_A INAD-like protein; PDZ 98.2 1.2E-06 4.2E-11 76.8 6.1 61 341-411 51-113 (124)
318 1x5n_A Harmonin; PDZ domain, u 98.2 2E-06 6.9E-11 74.1 7.4 57 481-539 40-98 (114)
319 1wi4_A Synip, syntaxin binding 98.2 1.5E-06 5E-11 74.5 6.4 58 482-539 41-104 (109)
320 1mfg_A ERB-B2 interacting prot 98.2 1.5E-06 5.2E-11 72.2 6.3 60 340-409 34-93 (95)
321 1qav_A Alpha-1 syntrophin (res 98.2 1.8E-06 6.2E-11 71.0 6.6 57 341-407 30-88 (90)
322 3qe1_A Sorting nexin-27, G pro 98.2 1.1E-06 3.9E-11 74.7 5.6 60 341-410 43-103 (107)
323 2dlu_A INAD-like protein; PDZ 98.2 2.1E-06 7.2E-11 73.6 7.3 61 341-411 38-100 (111)
324 2kpk_A Membrane-associated gua 98.2 2.3E-06 7.7E-11 75.6 7.6 61 341-409 43-105 (129)
325 2e7k_A Maguk P55 subfamily mem 98.2 1.3E-06 4.4E-11 72.2 5.7 56 482-538 29-86 (91)
326 2yuy_A RHO GTPase activating p 98.2 2.6E-07 8.9E-12 81.4 1.5 59 340-410 60-121 (126)
327 3kzd_A TIAM-1, T-lymphoma inva 98.2 2.3E-06 8E-11 70.9 7.1 53 481-536 34-88 (94)
328 2kom_A Partitioning defective 98.2 1.4E-06 4.9E-11 76.0 6.2 59 481-539 57-119 (121)
329 2g5m_B Neurabin-2; spinophilin 98.2 8.7E-07 3E-11 76.3 4.6 65 340-414 34-100 (113)
330 1wf8_A Neurabin-I; PDZ domain, 98.2 1.1E-06 3.9E-11 74.8 5.3 61 340-410 39-101 (107)
331 1g9o_A NHE-RF; PDZ domain, com 98.2 2.1E-06 7.3E-11 70.7 6.8 59 481-539 26-86 (91)
332 3bpu_A Membrane-associated gua 98.2 1.2E-06 4.2E-11 71.7 5.2 57 481-539 26-85 (88)
333 1ujd_A KIAA0559 protein; PDZ d 98.2 1.9E-06 6.7E-11 74.7 6.8 61 341-411 49-111 (117)
334 1wha_A KIAA0147 protein, scrib 98.2 1.1E-06 3.6E-11 74.7 4.9 61 340-410 37-99 (105)
335 1d5g_A Human phosphatase HPTP1 98.2 1.7E-06 5.7E-11 72.1 6.0 58 481-539 32-92 (96)
336 2d90_A PDZ domain containing p 98.2 2E-06 6.7E-11 72.6 6.5 57 481-538 29-87 (102)
337 1wif_A RSGI RUH-020, riken cDN 98.2 1.1E-06 3.8E-11 77.2 5.0 58 482-539 49-110 (126)
338 2q9v_A Membrane-associated gua 98.2 9.9E-07 3.4E-11 72.6 4.4 58 482-539 27-88 (90)
339 2eno_A Synaptojanin-2-binding 98.2 1.4E-06 4.9E-11 75.9 5.6 62 340-411 46-109 (120)
340 2edp_A Fragment, shroom family 98.2 1.3E-06 4.5E-11 73.5 5.2 59 341-410 35-95 (100)
341 1rgw_A ZAsp protein; PDZ, cyph 98.2 1.1E-06 3.7E-11 71.4 4.4 57 482-539 25-83 (85)
342 2db5_A INAD-like protein; PDZ 98.2 1.6E-06 5.4E-11 76.5 5.9 60 341-410 54-116 (128)
343 2opg_A Multiple PDZ domain pro 98.2 6.5E-06 2.2E-10 68.7 9.3 57 482-539 30-89 (98)
344 2kv8_A RGS12, regulator of G-p 98.2 7.8E-07 2.7E-11 72.0 3.5 56 483-539 24-81 (83)
345 2w4f_A Protein LAP4; structura 98.2 1.6E-06 5.4E-11 72.4 5.5 60 480-539 32-92 (97)
346 2koj_A Partitioning defective 98.2 2.1E-06 7.1E-11 73.6 6.3 59 481-539 38-100 (111)
347 2o2t_A Multiple PDZ domain pro 98.2 1.4E-06 4.9E-11 75.4 5.4 58 481-539 48-109 (117)
348 3o46_A Maguk P55 subfamily mem 98.2 2.1E-06 7.2E-11 71.1 6.1 57 481-538 27-86 (93)
349 1mfg_A ERB-B2 interacting prot 98.2 2.6E-06 9E-11 70.8 6.7 58 480-539 33-92 (95)
350 2jre_A C60-1 PDZ domain peptid 98.2 1.4E-06 4.9E-11 74.2 5.2 59 480-539 42-103 (108)
351 1lvm_A Catalytic domain of the 98.2 9.7E-05 3.3E-09 70.3 18.2 170 110-307 20-202 (229)
352 2edz_A PDZ domain-containing p 98.2 1.3E-06 4.5E-11 75.4 4.9 58 481-539 37-96 (114)
353 1wha_A KIAA0147 protein, scrib 98.2 1.4E-06 4.8E-11 74.0 5.0 59 480-539 36-97 (105)
354 2byg_A Channel associated prot 98.2 1.7E-06 5.9E-11 75.0 5.6 59 480-539 52-113 (117)
355 1uew_A Membrane associated gua 98.2 2.3E-06 8E-11 73.7 6.4 56 483-539 44-102 (114)
356 4amh_A Disks large homolog 1; 98.2 3.7E-06 1.3E-10 71.5 7.6 59 480-539 30-91 (106)
357 1fc6_A Photosystem II D1 prote 98.2 9.1E-06 3.1E-10 85.6 12.2 71 340-419 98-172 (388)
358 3ngh_A PDZ domain-containing p 98.2 1E-06 3.5E-11 74.9 3.9 57 481-538 25-83 (106)
359 3qzr_A 3C protein; chymotrypsi 98.2 0.0002 6.9E-09 66.3 19.6 164 107-296 10-178 (187)
360 1uez_A KIAA1526 protein; PDZ d 98.2 2.2E-06 7.5E-11 72.1 6.0 58 481-539 34-92 (101)
361 2fe5_A Presynaptic protein SAP 98.2 3.3E-06 1.1E-10 69.9 7.0 59 480-539 31-92 (94)
362 2fne_A Multiple PDZ domain pro 98.2 2.1E-06 7.2E-11 74.5 5.9 58 481-539 52-112 (117)
363 3e17_A Tight junction protein 98.2 3.2E-06 1.1E-10 69.3 6.7 56 482-538 21-79 (88)
364 2csj_A TJP2 protein; PDZ domai 98.2 1.5E-06 5.2E-11 75.3 4.9 60 340-410 45-105 (117)
365 2djt_A Unnamed protein product 98.2 2.2E-06 7.5E-11 72.5 5.8 58 481-539 37-97 (104)
366 2h2b_A Tight junction protein 98.1 1.9E-06 6.5E-11 73.3 5.3 59 480-539 37-96 (107)
367 1nf3_C PAR-6B; semi-CRIB motif 98.1 8.1E-07 2.8E-11 78.4 3.1 58 481-539 64-124 (128)
368 1n7e_A AMPA receptor interacti 98.1 2.7E-06 9.4E-11 71.0 6.2 57 482-539 30-89 (97)
369 2i1n_A Discs, large homolog 3; 98.1 2.3E-06 7.7E-11 72.2 5.7 59 480-539 32-93 (102)
370 1x5q_A LAP4 protein; PDZ domai 98.1 2.6E-06 8.7E-11 72.9 6.1 59 480-539 44-104 (110)
371 2edv_A FERM and PDZ domain-con 98.1 8.4E-07 2.9E-11 74.1 3.0 59 340-409 30-89 (96)
372 1b8q_A Protein (neuronal nitri 98.1 1.4E-06 4.8E-11 76.7 4.5 66 482-547 33-102 (127)
373 1wf7_A Enigma homologue protei 98.1 1.9E-06 6.4E-11 72.9 5.1 58 481-539 28-87 (103)
374 3k1r_A Harmonin; protein-prote 98.1 2.2E-06 7.5E-11 81.2 6.2 57 341-410 110-169 (192)
375 2dls_A PDZ-rhogef, RHO guanine 98.1 2.4E-06 8.3E-11 70.8 5.7 56 482-539 29-86 (93)
376 2kjd_A Sodium/hydrogen exchang 98.1 1.8E-06 6.3E-11 76.0 5.2 59 481-539 32-92 (128)
377 2eeg_A PDZ and LIM domain prot 98.1 2.1E-06 7.1E-11 71.3 5.3 58 481-539 31-90 (94)
378 2dmz_A INAD-like protein; PDZ 98.1 2.1E-06 7.3E-11 75.7 5.6 59 480-539 44-105 (129)
379 4e34_A Golgi-associated PDZ an 98.1 2.8E-06 9.5E-11 69.3 5.9 57 341-407 28-86 (87)
380 1y7n_A Amyloid beta A4 precurs 98.1 2.6E-06 8.7E-11 70.3 5.7 53 485-538 34-88 (90)
381 1ujd_A KIAA0559 protein; PDZ d 98.1 3E-06 1E-10 73.4 6.5 58 481-539 48-108 (117)
382 2f5y_A Regulator of G-protein 98.1 2.4E-06 8.2E-11 70.5 5.4 56 483-539 25-82 (91)
383 2dm8_A INAD-like protein; PDZ 98.1 2.1E-06 7.1E-11 74.2 5.2 62 341-412 43-106 (116)
384 1v62_A KIAA1719 protein; struc 98.1 2.9E-06 1E-10 73.5 6.2 57 482-539 42-101 (117)
385 2awx_A Synapse associated prot 98.1 3.5E-06 1.2E-10 71.5 6.5 59 480-539 31-92 (105)
386 1q3o_A Shank1; PDZ, GKAP, pept 98.1 2.5E-06 8.4E-11 73.0 5.6 56 482-538 45-102 (109)
387 2dkr_A LIN-7 homolog B; LIN-7B 98.1 2.4E-06 8.1E-11 70.7 5.3 60 340-409 29-90 (93)
388 2d8i_A T-cell lymphoma invasio 98.1 1.7E-06 5.9E-11 74.7 4.5 70 318-409 31-101 (114)
389 1y8t_A Hypothetical protein RV 98.1 6.8E-06 2.3E-10 84.4 9.7 67 481-547 241-310 (324)
390 1wi4_A Synip, syntaxin binding 98.1 1.7E-06 5.9E-11 74.0 4.4 62 341-410 41-106 (109)
391 1wg6_A Hypothetical protein (r 98.1 1.8E-06 6.1E-11 76.1 4.5 62 341-410 55-123 (127)
392 3l4f_D SH3 and multiple ankyri 98.1 2.8E-06 9.6E-11 75.4 5.8 60 341-410 65-125 (132)
393 3b76_A E3 ubiquitin-protein li 98.1 4.3E-06 1.5E-10 72.6 6.8 59 340-408 52-112 (118)
394 3b76_A E3 ubiquitin-protein li 98.1 3E-06 1E-10 73.6 5.7 58 480-538 51-111 (118)
395 2yuy_A RHO GTPase activating p 98.1 1E-06 3.5E-11 77.6 2.8 58 481-539 60-119 (126)
396 3r68_A Na(+)/H(+) exchange reg 98.1 1.8E-06 6.1E-11 71.7 4.2 49 482-530 29-79 (95)
397 2z17_A Pleckstrin homology SEC 98.1 2.9E-06 1E-10 71.8 5.5 56 480-536 46-103 (104)
398 3axa_A Afadin, nectin-3, prote 98.1 5.5E-06 1.9E-10 70.3 7.1 59 480-539 36-97 (106)
399 1uit_A Human discs large 5 pro 98.1 2.3E-06 7.9E-11 74.1 4.7 58 482-539 42-100 (117)
400 2db5_A INAD-like protein; PDZ 98.1 2.7E-06 9.1E-11 75.0 5.1 58 481-539 53-114 (128)
401 1m5z_A GRIP, AMPA receptor int 98.1 4.4E-06 1.5E-10 68.8 6.1 58 481-539 31-90 (91)
402 2jik_A Synaptojanin-2 binding 98.1 2.6E-06 8.8E-11 71.7 4.8 59 480-539 35-96 (101)
403 1x6d_A Interleukin-16; PDZ dom 98.1 1.4E-06 4.9E-11 75.7 3.2 65 340-413 41-107 (119)
404 2ehr_A INAD-like protein; PDZ 98.1 2.2E-06 7.6E-11 74.2 4.4 61 340-410 49-111 (117)
405 1n7t_A 99-MER peptide of densi 98.1 4.3E-06 1.5E-10 70.6 6.1 58 480-539 41-100 (103)
406 1uju_A Scribble; PDZ domain, c 98.1 1.9E-06 6.6E-11 73.9 3.9 59 480-539 42-103 (111)
407 2gzv_A PRKCA-binding protein; 98.1 3.9E-06 1.3E-10 72.4 5.9 56 482-538 50-108 (114)
408 1i16_A Interleukin 16, LCF; cy 98.1 2.7E-06 9.3E-11 75.2 5.0 59 481-539 56-117 (130)
409 3qe1_A Sorting nexin-27, G pro 98.1 4.6E-06 1.6E-10 70.9 6.2 56 483-539 44-101 (107)
410 3nfk_A Tyrosine-protein phosph 98.1 6.2E-06 2.1E-10 70.1 6.9 60 341-408 43-107 (107)
411 2qkv_A Inactivation-NO-after-p 98.1 4.1E-06 1.4E-10 69.9 5.6 57 482-539 31-90 (96)
412 1n7t_A 99-MER peptide of densi 98.1 2.7E-06 9.1E-11 71.9 4.5 60 340-409 42-101 (103)
413 2z17_A Pleckstrin homology SEC 98.1 2E-06 6.7E-11 72.9 3.7 54 340-405 47-103 (104)
414 3gsl_A Disks large homolog 4; 98.1 3.3E-06 1.1E-10 79.7 5.7 62 340-413 129-194 (196)
415 3tsz_A Tight junction protein 98.1 3.3E-06 1.1E-10 88.8 6.1 62 341-410 31-93 (391)
416 3soe_A Membrane-associated gua 98.1 1.1E-05 3.9E-10 69.1 8.3 63 341-413 34-97 (113)
417 1whd_A RGS3, regulator of G-pr 98.1 1.4E-06 4.8E-11 73.3 2.6 57 482-539 36-94 (100)
418 1w9e_A Syntenin 1; cell adhesi 98.1 4.4E-06 1.5E-10 77.1 6.2 66 482-547 27-95 (166)
419 1wg6_A Hypothetical protein (r 98.1 3.3E-06 1.1E-10 74.4 5.0 59 481-539 54-121 (127)
420 1va8_A Maguk P55 subfamily mem 98.0 4.6E-06 1.6E-10 71.8 5.8 57 482-539 48-107 (113)
421 2g5m_B Neurabin-2; spinophilin 98.0 4.6E-06 1.6E-10 71.7 5.8 59 480-539 33-94 (113)
422 1ky9_A Protease DO, DEGP, HTRA 98.0 1E-06 3.5E-11 94.5 2.0 68 480-547 284-353 (448)
423 1uju_A Scribble; PDZ domain, c 98.0 1.4E-06 5E-11 74.7 2.6 61 340-410 43-105 (111)
424 3q3y_A HEVB EV93 3C protease; 98.0 0.00034 1.2E-08 64.7 18.5 163 108-296 9-176 (191)
425 2dkr_A LIN-7 homolog B; LIN-7B 98.0 6.8E-06 2.3E-10 67.9 6.5 58 481-539 29-89 (93)
426 1x6d_A Interleukin-16; PDZ dom 98.0 3.1E-06 1.1E-10 73.5 4.5 59 481-539 41-102 (119)
427 2b0f_A Picornain 3C (protease 98.0 0.00018 6.2E-09 66.6 16.6 145 141-296 24-173 (182)
428 1q7x_A PDZ2B domain of PTP-BAS 98.0 3.3E-06 1.1E-10 72.0 4.6 58 481-539 41-101 (108)
429 2vwr_A Ligand of NUMB protein 98.0 5E-06 1.7E-10 69.0 5.5 58 481-539 28-88 (95)
430 2ehr_A INAD-like protein; PDZ 98.0 1.1E-05 3.8E-10 69.7 7.9 59 480-539 48-109 (117)
431 2r4h_A Membrane-associated gua 98.0 6.8E-06 2.3E-10 70.6 6.5 59 481-540 48-109 (112)
432 1v6b_A Harmonin isoform A1; st 98.0 1.2E-06 4E-11 76.2 1.6 60 341-408 43-106 (118)
433 3qo6_A Protease DO-like 1, chl 98.0 3.1E-06 1.1E-10 87.8 5.1 66 481-546 250-328 (348)
434 3o46_A Maguk P55 subfamily mem 98.0 5.9E-06 2E-10 68.3 5.8 59 340-410 27-89 (93)
435 2iwo_A Multiple PDZ domain pro 98.0 6.3E-06 2.2E-10 71.8 6.1 58 481-539 52-112 (120)
436 3nfk_A Tyrosine-protein phosph 98.0 7.4E-06 2.5E-10 69.6 6.4 58 482-539 43-107 (107)
437 1ujv_A Membrane associated gua 98.0 8.5E-06 2.9E-10 67.9 6.6 55 483-539 33-90 (96)
438 2cs5_A Tyrosine-protein phosph 98.0 6.2E-06 2.1E-10 71.6 6.0 58 482-539 41-105 (119)
439 2qg1_A Multiple PDZ domain pro 98.0 7.2E-06 2.5E-10 67.6 6.1 59 481-540 28-89 (92)
440 2gzv_A PRKCA-binding protein; 98.0 9.5E-06 3.2E-10 70.0 7.0 55 341-407 50-108 (114)
441 1qav_A Alpha-1 syntrophin (res 98.0 6.9E-06 2.4E-10 67.4 5.8 57 481-538 29-88 (90)
442 3hpk_A Protein interacting wit 98.0 6.3E-06 2.1E-10 72.3 5.9 56 482-538 45-103 (125)
443 1ufx_A KIAA1526 protein; PDZ d 98.0 5.7E-06 1.9E-10 70.0 5.4 56 484-539 34-96 (103)
444 3num_A Serine protease HTRA1; 98.0 7.9E-07 2.7E-11 91.7 0.0 66 481-548 253-319 (332)
445 1um7_A Synapse-associated prot 98.0 3.3E-06 1.1E-10 72.5 3.9 60 341-410 39-100 (113)
446 3l4f_D SH3 and multiple ankyri 98.0 8.7E-06 3E-10 72.1 6.7 56 482-538 65-122 (132)
447 2dc2_A GOPC, golgi associated 98.0 8E-06 2.8E-10 69.0 6.2 60 341-410 35-96 (103)
448 1um1_A KIAA1849 protein, RSGI 98.0 7.5E-06 2.6E-10 70.0 6.0 59 480-539 34-95 (110)
449 1wf8_A Neurabin-I; PDZ domain, 98.0 6.3E-06 2.2E-10 70.1 5.5 59 480-539 38-99 (107)
450 2dm8_A INAD-like protein; PDZ 98.0 4.1E-06 1.4E-10 72.4 4.3 57 482-539 43-102 (116)
451 2eno_A Synaptojanin-2-binding 98.0 6.7E-06 2.3E-10 71.5 5.7 59 480-539 45-106 (120)
452 2d92_A INAD-like protein; PDZ 98.0 5.1E-06 1.7E-10 70.9 4.8 60 340-408 43-104 (108)
453 1uhp_A Hypothetical protein KI 98.0 9.5E-06 3.3E-10 69.0 6.5 59 480-539 39-100 (107)
454 2dlu_A INAD-like protein; PDZ 98.0 5.5E-06 1.9E-10 70.9 4.9 57 482-539 38-97 (111)
455 2edp_A Fragment, shroom family 98.0 4E-06 1.4E-10 70.4 3.8 57 482-539 35-93 (100)
456 2qt5_A Glutamate receptor-inte 98.0 5.8E-06 2E-10 78.6 5.4 61 340-412 134-198 (200)
457 1wfv_A Membrane associated gua 98.0 3.9E-06 1.3E-10 70.8 3.6 58 481-539 35-95 (103)
458 2edv_A FERM and PDZ domain-con 98.0 3.8E-06 1.3E-10 70.1 3.5 56 482-539 31-88 (96)
459 2d8i_A T-cell lymphoma invasio 98.0 4.9E-06 1.7E-10 71.8 4.2 54 482-538 44-99 (114)
460 2krg_A Na(+)/H(+) exchange reg 98.0 2.2E-06 7.7E-11 82.5 2.2 60 341-412 33-96 (216)
461 2la8_A Inactivation-NO-after-p 97.9 5.8E-06 2E-10 70.3 4.4 56 482-538 25-83 (106)
462 3i4w_A Disks large homolog 4; 97.9 9.6E-06 3.3E-10 68.4 5.7 56 482-538 35-93 (104)
463 2iwn_A Multiple PDZ domain pro 97.9 5.7E-06 1.9E-10 68.8 4.2 58 481-539 32-92 (97)
464 1cqq_A Type 2 rhinovirus 3C pr 97.9 0.00086 2.9E-08 62.2 19.2 161 110-296 9-174 (180)
465 3gge_A PDZ domain-containing p 97.9 3.5E-05 1.2E-09 63.6 8.6 59 341-407 28-88 (95)
466 3e17_A Tight junction protein 97.9 9.7E-06 3.3E-10 66.4 5.2 65 333-408 14-80 (88)
467 3egg_C Spinophilin; PP1, serin 97.9 1.4E-05 4.8E-10 74.0 6.7 59 340-408 110-170 (170)
468 3shw_A Tight junction protein 97.9 8.6E-06 2.9E-10 87.1 6.0 62 341-410 23-85 (468)
469 3zve_A 3C protease; hydrolase, 97.9 0.00059 2E-08 63.7 17.7 160 110-296 9-174 (190)
470 1v6b_A Harmonin isoform A1; st 97.9 9.9E-06 3.4E-10 70.3 5.3 57 483-539 44-106 (118)
471 4e34_A Golgi-associated PDZ an 97.9 1.5E-05 5.1E-10 64.9 6.1 54 482-536 28-84 (87)
472 3egg_C Spinophilin; PP1, serin 97.9 1.5E-05 5E-10 73.9 6.5 59 480-539 109-170 (170)
473 3k1r_A Harmonin; protein-prote 97.9 1.2E-05 4.2E-10 76.0 6.1 59 481-541 109-169 (192)
474 2eei_A PDZ domain-containing p 97.9 9.7E-06 3.3E-10 68.7 4.7 58 481-539 31-90 (106)
475 3k50_A Putative S41 protease; 97.9 1.5E-05 5.3E-10 83.9 7.1 57 342-411 91-148 (403)
476 2dc2_A GOPC, golgi associated 97.9 1.4E-05 4.9E-10 67.4 5.6 56 482-538 35-93 (103)
477 3hpk_A Protein interacting wit 97.9 1.8E-05 6.1E-10 69.3 6.3 57 341-407 45-103 (125)
478 2lob_A Golgi-associated PDZ an 97.1 1.9E-06 6.5E-11 74.1 0.0 34 341-374 53-88 (112)
479 4dcd_A Protease 3C, genome pol 97.9 0.0011 3.7E-08 61.6 18.5 161 110-296 16-181 (190)
480 1r6j_A Syntenin 1; PDZ, membra 97.8 2.7E-05 9.2E-10 62.8 6.4 53 345-407 27-80 (82)
481 2daz_A INAD-like protein; PDZ 97.8 1.5E-05 5.2E-10 69.7 5.2 58 481-539 50-110 (124)
482 2cs5_A Tyrosine-protein phosph 97.8 1.2E-05 4.2E-10 69.7 4.4 62 341-410 41-107 (119)
483 1i16_A Interleukin 16, LCF; cy 97.8 1.2E-05 3.9E-10 71.1 4.2 61 341-410 57-119 (130)
484 1p1d_A PDZ45, glutamate recept 97.8 1.6E-05 5.3E-10 75.4 5.2 59 481-539 35-97 (196)
485 1r6j_A Syntenin 1; PDZ, membra 97.8 2.5E-05 8.5E-10 63.0 5.6 51 485-536 26-78 (82)
486 2csj_A TJP2 protein; PDZ domai 97.8 1.9E-05 6.6E-10 68.2 5.3 58 480-539 44-103 (117)
487 4fln_A Protease DO-like 2, chl 97.8 3.9E-05 1.3E-09 83.4 8.6 89 438-548 253-354 (539)
488 1tp5_A Presynaptic density pro 97.7 2.5E-05 8.6E-10 67.6 5.0 57 482-538 38-96 (119)
489 1ufx_A KIAA1526 protein; PDZ d 97.7 1.5E-05 5.1E-10 67.4 3.4 59 342-410 33-98 (103)
490 2qbw_A PDZ-fibronectin fusion 97.7 6.6E-05 2.3E-09 70.8 8.2 57 480-538 22-80 (195)
491 2hal_A Hepatitis A protease 3C 97.7 0.00078 2.7E-08 64.3 14.7 171 106-296 3-204 (212)
492 1z87_A Alpha-1-syntrophin; pro 97.7 1.9E-05 6.5E-10 78.1 3.6 61 341-411 103-165 (263)
493 3tsz_A Tight junction protein 97.7 3.9E-05 1.3E-09 80.7 6.0 59 481-539 30-91 (391)
494 1um7_A Synapse-associated prot 97.7 1.9E-05 6.7E-10 67.6 3.1 57 482-539 39-98 (113)
495 2krg_A Na(+)/H(+) exchange reg 97.6 1.6E-05 5.6E-10 76.4 2.6 57 482-539 33-92 (216)
496 3r0h_A INAD, inactivation-NO-a 97.6 5.1E-05 1.8E-09 72.2 5.9 58 482-539 45-107 (206)
497 3soe_A Membrane-associated gua 97.6 9.3E-05 3.2E-09 63.4 6.8 55 483-539 35-92 (113)
498 4fgm_A Aminopeptidase N family 97.6 4.5E-05 1.5E-09 84.5 5.5 66 482-548 496-563 (597)
499 2lob_A Golgi-associated PDZ an 96.7 9.1E-06 3.1E-10 69.8 0.0 54 482-536 53-109 (112)
500 1fc6_A Photosystem II D1 prote 97.5 8.8E-05 3E-09 78.0 6.2 59 481-539 98-158 (388)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=3.7e-79 Score=664.03 Aligned_cols=461 Identities=45% Similarity=0.746 Sum_probs=429.5
Q ss_pred HhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeE
Q 007765 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLA 190 (590)
Q Consensus 111 ~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlA 190 (590)
...+|||+|++....++|+.||+...+..+.||||||++||||||+|||++++.+.|++.+|++.|+|++++.|+.+|||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLA 124 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIA 124 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEE
Confidence 45699999999999999999999999999999999999999999999999999999999779999999999999999999
Q ss_pred EEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceE
Q 007765 191 ILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPA 270 (590)
Q Consensus 191 lLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl 270 (590)
|||++.+.++..++++.+++.+.+|++|+++|||.++...+++.|+|+++++..+..+.....+||+|+++++|||||||
T Consensus 125 vLkv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPL 204 (539)
T 4fln_A 125 LLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPA 204 (539)
T ss_dssp EEEECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEE
T ss_pred EEEEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchh
Confidence 99999876666788899999889999999999999887679999999999887766666666789999999999999999
Q ss_pred E-eCCEEEEEEeeecC--CCCceeEEeehHHHHHHHHHHHHcCccccccccccceeeeccHhhhhhcCCCCCcCceEEEE
Q 007765 271 I-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNK 347 (590)
Q Consensus 271 ~-~~G~vVGI~~~~~~--~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~ 347 (590)
+ .+|+||||+++.+. +.++++||||++.+++++++|.++|++.++|||||.++++.++.+++.+||+. ..|++|..
T Consensus 205 vn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~-~~Gv~V~~ 283 (539)
T 4fln_A 205 FNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPT-NEGVLVRR 283 (539)
T ss_dssp ECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSS-SBCEEEEE
T ss_pred ccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCC-cCceeeec
Confidence 9 99999999998764 56789999999999999999999999988999999999998999999999986 58999999
Q ss_pred eCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecCCCCCCC
Q 007765 348 INPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLLQPLVPV 427 (590)
Q Consensus 348 V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~l~~~ 427 (590)
|.|+|||+++||+||+|++|||++|.+.+++.++..++++|.+++..+.+|++++|+|+|+|+++++++++...+.+.+.
T Consensus 284 V~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~ 363 (539)
T 4fln_A 284 VEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPY 363 (539)
T ss_dssp ECTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSSCS
T ss_pred ccCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCcccccc
Confidence 99999998889999999999999999999999988999999999999999999999999999999999999999888888
Q ss_pred ccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEE
Q 007765 428 HQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVK 507 (590)
Q Consensus 428 ~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~ 507 (590)
+..+..|+|++++||+|.+|+++++++++.+ ..+.+++..+.....+.+++++|+|++|+++++|++|++++||+|+
T Consensus 364 ~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~ 440 (539)
T 4fln_A 364 HIDGGQPSYIIVAGLVFTPLSEPLIEEECED---TIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVL 440 (539)
T ss_dssp CTTSSCCCCCCSTTEEEEECCHHHHTTSCSS---SSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEE
T ss_pred ccccCCCccccccceEEeeCCHHHHHhhccc---ccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEE
Confidence 8888899999999999999999999986654 5677888888888888899999999999999999999999999999
Q ss_pred eeCCeecCCHHHHHHHHHhcCCCceEEEeCCCeEEEEEechhhhhhHHHhhhcCCCcCCCCCCCCccc
Q 007765 508 KVNGVEIENLKHLCQLVENCSSENLRFDLDDDRVVVLNYDVAKIATSKILKRHRIPSAMSGDLNGEQI 575 (590)
Q Consensus 508 ~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~~~i~l~~~~~~~~~~~i~~~~~i~~~~s~~l~~~~~ 575 (590)
+|||++|+|++||.+++++++++++.|++++++.++|+.+..++++.+|+++|+|+..+|.||.+++.
T Consensus 441 ~vNg~~V~s~~~l~~~l~~~k~~~l~~~~~~~~~ivL~~~~~~~~~~~Il~~~~I~~~~S~dl~~~~~ 508 (539)
T 4fln_A 441 KFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYV 508 (539)
T ss_dssp EETTEECCSHHHHHHHHHTCCSSEEEEEETTSCEEEEEHHHHHHHHHHHHTTTTCSCSSCGGGGSCCC
T ss_pred eECCEEcCCHHHHHHHHHHcCCCeEEEEECCCEEEEEEHHHHHHhHHHHHHhcCCCcccCcchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999987654
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=8e-57 Score=484.61 Aligned_cols=395 Identities=21% Similarity=0.305 Sum_probs=325.6
Q ss_pred CCCcHHHHHHHhCCCcEEEEeeecCCC----------CC---CCccCCCCCCceEEEEEEe-C-CeEEEcCcccCCCcEE
Q 007765 101 KTTNAYAAIELALDSVVKIFTVSSSPN----------YG---LPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFV 165 (590)
Q Consensus 101 ~~~~~~~~~~~~~~sVV~I~~~~~~~~----------~~---~p~~~~~~~~~~GsGfiI~-~-g~IlT~aHvv~~~~~i 165 (590)
...++.++++++.+|||.|.+...... ++ .||+......+.||||||+ + ||||||+|||.++..+
T Consensus 11 ~~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i 90 (436)
T 4a8c_A 11 PLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKI 90 (436)
T ss_pred CCCCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEE
Confidence 345799999999999999998764321 11 2454445567899999999 5 8999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEeccccc
Q 007765 166 LVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPT 243 (590)
Q Consensus 166 ~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~ 243 (590)
.|++. +++.++|++++.|+.+||||||++.+. .+++++|+++. ..|++|+++|||.+.. .+++.|+|+.+.+.
T Consensus 91 ~V~~~-dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~r~ 165 (436)
T 4a8c_A 91 SIQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRS 165 (436)
T ss_pred EEEeC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCC-ccEEEEEEeeeccc
Confidence 99997 899999999999999999999997653 78999998754 5699999999999986 59999999998775
Q ss_pred ccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHHHcCccccccccc
Q 007765 244 QYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLG 319 (590)
Q Consensus 244 ~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lG 319 (590)
... ...+..++++|+++++|||||||+ .+|+||||+++... +..+++|+||++.+++++++|.++|++. ++|||
T Consensus 166 ~~~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lG 243 (436)
T 4a8c_A 166 GLN-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLG 243 (436)
T ss_pred ccC-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-cccCc
Confidence 222 223346899999999999999999 99999999998765 3457899999999999999999999988 99999
Q ss_pred cceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCC
Q 007765 320 LSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPN 398 (590)
Q Consensus 320 i~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g 398 (590)
+.++.+ ++++++.+|++. ..|++|..|.++|||+++ |++||+|++|||++|.+|.++. ..+.....|
T Consensus 244 v~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~----------~~l~~~~~g 311 (436)
T 4a8c_A 244 IKGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR----------SRIATTEPG 311 (436)
T ss_pred eEeccc-CHHHHHHhCCCC-CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCC
Confidence 999998 899999999986 689999999999999999 9999999999999999998754 556566789
Q ss_pred CEEEEEEEeCCEEEEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCcc
Q 007765 399 EKSLVRVLRDGKEHEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKK 478 (590)
Q Consensus 399 ~~v~l~V~R~g~~~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 478 (590)
++++|+|+|+|+.+++++++..++..... .. ....|+....+++. ...
T Consensus 312 ~~v~l~v~R~g~~~~~~v~l~~~~~~~~~------~~-~~~~gl~~~~~~~~-------------------------~~~ 359 (436)
T 4a8c_A 312 TKVKLGLLRNGKPLEVEVTLDTSTSSSAS------AE-MITPALEGATLSDG-------------------------QLK 359 (436)
T ss_pred CEEEEEEEECCEEEEEEEEECCCCccccc------cc-ccccCceeeecccc-------------------------ccc
Confidence 99999999999999999998876431110 00 01134433333210 001
Q ss_pred CCcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCCC-eEEEEEec
Q 007765 479 AGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 479 ~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
+...+++|..|.++++|+.+|+++||+|++|||++|.+|++|.+++++.+ +.+.|++.|+ +.+.+...
T Consensus 360 ~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~-~~v~l~v~R~g~~~~~~~~ 428 (436)
T 4a8c_A 360 DGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKP-AIIALQIVRGNESIYLLMR 428 (436)
T ss_pred CCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCC-CeEEEEEEECCEEEEEEEE
Confidence 23468899999999999999999999999999999999999999999844 4899999884 55555443
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.2e-56 Score=484.34 Aligned_cols=398 Identities=23% Similarity=0.308 Sum_probs=316.8
Q ss_pred CCCcHHHHHHHhCCCcEEEEeeecCCC------------CCCCccC---------CCCCCceEEEEEEe-C-CeEEEcCc
Q 007765 101 KTTNAYAAIELALDSVVKIFTVSSSPN------------YGLPWQN---------KSQRETTGSGFVIP-G-KKILTNAH 157 (590)
Q Consensus 101 ~~~~~~~~~~~~~~sVV~I~~~~~~~~------------~~~p~~~---------~~~~~~~GsGfiI~-~-g~IlT~aH 157 (590)
...++.++++++.||||.|.+...... ++..|.. .....+.||||||+ + ||||||+|
T Consensus 17 ~~~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~H 96 (451)
T 3pv2_A 17 NMPSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDH 96 (451)
T ss_dssp -CCCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHH
T ss_pred CCCCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChH
Confidence 356789999999999999998763221 1111111 12335789999999 4 89999999
Q ss_pred ccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCC----Cce
Q 007765 158 VVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGD----NIS 231 (590)
Q Consensus 158 vv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~----~~~ 231 (590)
||.++..+.|++. +++.++|++++.|+.+||||||++.. .++++.|+++. ..|++|+++|||++.. ..+
T Consensus 97 Vv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~ 171 (451)
T 3pv2_A 97 VIRNASLITVTLQ-DGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQS 171 (451)
T ss_dssp HHTTEEEEEEECT-TSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCE
T ss_pred HhCCCCEEEEEEc-CCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccCCc
Confidence 9999999999987 89999999999999999999999764 68899998754 5699999999999865 148
Q ss_pred EEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHH
Q 007765 232 VTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 232 v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (590)
++.|+|+.+.+..... ..+..++++|+++++|||||||+ .+|+||||+++.+. +..+++|+||++.+++++++|+
T Consensus 172 vt~Givs~~~r~~~~~-~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~ 250 (451)
T 3pv2_A 172 ATFGIVSALKRSDLNI-EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQII 250 (451)
T ss_dssp EEEEEEEEEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHH
T ss_pred eeEEEEeeccccccCC-CCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHH
Confidence 9999999887752221 22345799999999999999999 89999999998765 4568999999999999999999
Q ss_pred HcCccccccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccc
Q 007765 308 EHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERI 386 (590)
Q Consensus 308 ~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~ 386 (590)
++|++. ++|||+.++++ ++++++.+|++....|++|..|.++|||+++ |++||+|++|||++|.+|.++.
T Consensus 251 ~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~------- 321 (451)
T 3pv2_A 251 KFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVK------- 321 (451)
T ss_dssp HHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH-------
T ss_pred hcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHH-------
Confidence 999988 99999999999 8999999999874489999999999999999 9999999999999999998754
Q ss_pred hHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhh
Q 007765 387 TFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRR 466 (590)
Q Consensus 387 ~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~ 466 (590)
..+.....|++++|+|+|+|+.+++++++...+....... . ......|+.+.++++..
T Consensus 322 ---~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~-~---~~~~~~G~~l~~~~~~~--------------- 379 (451)
T 3pv2_A 322 ---TTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQ-S---NNPFLYGLALRAFEQES--------------- 379 (451)
T ss_dssp ---HHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHH-H---HSTTTTTEEEEEEEEEC---------------
T ss_pred ---HHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCccccccc-c---ccccccccccccCChhH---------------
Confidence 5666667899999999999999999998875431000000 0 00113477766654310
Q ss_pred hHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCCC-eEEEEE
Q 007765 467 LCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDDD-RVVVLN 545 (590)
Q Consensus 467 ~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~-~~i~l~ 545 (590)
.......+++|..|.++++|+.+|+++||+|++|||++|.++++|.+++++ +++.+.|.+.|+ ..+.+.
T Consensus 380 ---------~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R~g~~~~v~ 449 (451)
T 3pv2_A 380 ---------PPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLRGPGSMYLL 449 (451)
T ss_dssp ---------TTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEETTEEEEEE
T ss_pred ---------hcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEECCEEEEEE
Confidence 011234689999999999999999999999999999999999999999998 678899998874 555544
No 4
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.5e-54 Score=467.42 Aligned_cols=382 Identities=23% Similarity=0.333 Sum_probs=248.9
Q ss_pred CcHHHHHHHhCCCcEEEEeeecC-------CCCCC-------------------CccCC----------CCCCceEEEEE
Q 007765 103 TNAYAAIELALDSVVKIFTVSSS-------PNYGL-------------------PWQNK----------SQRETTGSGFV 146 (590)
Q Consensus 103 ~~~~~~~~~~~~sVV~I~~~~~~-------~~~~~-------------------p~~~~----------~~~~~~GsGfi 146 (590)
.++.++++++.||||.|.+.... +.++. ||+.. ....+.||||+
T Consensus 13 ~~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~i 92 (448)
T 1ky9_A 13 PSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVI 92 (448)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEE
T ss_pred ccHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEE
Confidence 46899999999999999886532 11111 11110 01236799999
Q ss_pred Ee-C-CeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEe
Q 007765 147 IP-G-KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVG 222 (590)
Q Consensus 147 I~-~-g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG 222 (590)
|+ + ||||||+|||.++..+.|++. +++.++|++++.|+.+||||||++.+. .+++++|+++. +.|++|+++|
T Consensus 93 i~~~~g~IlTn~HVv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG 168 (448)
T 1ky9_A 93 IDADKGYVVTNNHVVDNATVIKVQLS-DGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRVGDYTVAIG 168 (448)
T ss_dssp EETTTTEEEEEHHHHTTEEEEEEEET-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTCEEEEEE
T ss_pred EECCCCEEEEChHHhCCCCEEEEEEC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCCCCEEEEEE
Confidence 99 5 899999999999999999997 899999999999999999999998653 68899999864 5699999999
Q ss_pred cCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHH
Q 007765 223 YPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPV 298 (590)
Q Consensus 223 ~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~ 298 (590)
||++.. .+++.|+|+.+.+... ....+..++++|+++++|||||||+ .+|+||||+++... +..+++|+||++.
T Consensus 169 ~P~g~~-~tvt~Givs~~~r~~~-~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~ 246 (448)
T 1ky9_A 169 NPFGLG-ETVTSGIVSALGRSGL-NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNM 246 (448)
T ss_dssp CTTSSS-CEEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHH
T ss_pred CCCCCC-CeEEeEEEeecccccc-CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeeccc
Confidence 999976 4999999999877522 1122346799999999999999999 99999999998765 3367999999999
Q ss_pred HHHHHHHHHHcCccccccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCc
Q 007765 299 IKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (590)
Q Consensus 299 i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~ 377 (590)
+++++++|.++|++. ++|||+.++++ ++++++.+|++. ..|++|..|.++|||+++ |++||+|++|||++|.+|.+
T Consensus 247 ~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~ 323 (448)
T 1ky9_A 247 VKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAA 323 (448)
T ss_dssp HHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHH
T ss_pred chhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHH
Confidence 999999999999988 99999999998 789999999986 589999999999999999 99999999999999999986
Q ss_pred ccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCC
Q 007765 378 VAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGE 457 (590)
Q Consensus 378 v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~ 457 (590)
+. ..+.....|++++|+|+|+|+.+++++++...+... ..........+|+.+.++.
T Consensus 324 l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~----~~~~~~~~~~~G~~l~~~~--------- 380 (448)
T 1ky9_A 324 LR----------AQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQ----VDSSSIFNGIEGAEMSNKG--------- 380 (448)
T ss_dssp HH----------HHTTSSBTTCCCEEEEESSSCEEECCCC----------------------------------------
T ss_pred HH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcc----cccccccccccceEeeccC---------
Confidence 53 556555679999999999999888777764322100 0000001112344332211
Q ss_pred CccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeC
Q 007765 458 DWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLD 537 (590)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~ 537 (590)
...+++|..|.++++|+.+|+++||+|++|||++|.++++|.+++++.++ .+.|++.
T Consensus 381 ----------------------~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l~v~ 437 (448)
T 1ky9_A 381 ----------------------KDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLALNIQ 437 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------CCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEEEEEE
Confidence 23567899999999999999999999999999999999999999998665 8888888
Q ss_pred CC
Q 007765 538 DD 539 (590)
Q Consensus 538 r~ 539 (590)
|+
T Consensus 438 R~ 439 (448)
T 1ky9_A 438 RG 439 (448)
T ss_dssp --
T ss_pred EC
Confidence 85
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=5.8e-49 Score=410.38 Aligned_cols=303 Identities=23% Similarity=0.378 Sum_probs=257.8
Q ss_pred CCcHHHHHHHhCCCcEEEEeeecCC----------CCC---CCccCCCCCCceEEEEEEe-C-CeEEEcCcccCCCcEEE
Q 007765 102 TTNAYAAIELALDSVVKIFTVSSSP----------NYG---LPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFVL 166 (590)
Q Consensus 102 ~~~~~~~~~~~~~sVV~I~~~~~~~----------~~~---~p~~~~~~~~~~GsGfiI~-~-g~IlT~aHvv~~~~~i~ 166 (590)
..++.++++++.+|||.|.+..... .++ .||+......+.||||+|+ + ||||||+|||.++..+.
T Consensus 12 ~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~ 91 (345)
T 3stj_A 12 LPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (345)
T ss_dssp CCBSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEE
T ss_pred CCCHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEE
Confidence 3568999999999999999876432 111 2454445557899999999 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccc
Q 007765 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (590)
Q Consensus 167 V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~ 244 (590)
|.+. +++.++|++++.|+.+||||||++.+. .+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~-~~vt~G~Vs~~~~~~ 166 (345)
T 3stj_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSG 166 (345)
T ss_dssp EECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCS-CEEEEEEEEEEEECC
T ss_pred EEeC-CCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCC-CcEEeeEEeeecccc
Confidence 9987 899999999999999999999997653 68899998764 5699999999999976 599999999887652
Q ss_pred cccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHHHcCcccccccccc
Q 007765 245 YVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGL 320 (590)
Q Consensus 245 ~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi 320 (590)
... ..+..++++|+++++|||||||+ .+|+||||+++... +..+++|+||++.+++++++|.++|++. ++|||+
T Consensus 167 ~~~-~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lGv 244 (345)
T 3stj_A 167 LNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGI 244 (345)
T ss_dssp SSS-SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCE
T ss_pred cCC-CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-ccccce
Confidence 221 22346799999999999999999 99999999998766 4467999999999999999999999988 999999
Q ss_pred ceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCC
Q 007765 321 SCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNE 399 (590)
Q Consensus 321 ~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~ 399 (590)
.++.+ ++++++.+|++. ..|++|..|.++|||+++ ||+||+|++|||++|.++.++. ..+....+|+
T Consensus 245 ~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~----------~~l~~~~~g~ 312 (345)
T 3stj_A 245 KGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR----------SRIATTEPGT 312 (345)
T ss_dssp EEEEC-CHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHH----------HHHHTSCTTC
T ss_pred eeEee-cHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCC
Confidence 99998 899999999986 689999999999999999 9999999999999999998654 6676667899
Q ss_pred EEEEEEEeCCEEEEEEEEEecCCC
Q 007765 400 KSLVRVLRDGKEHEFSITLRLLQP 423 (590)
Q Consensus 400 ~v~l~V~R~g~~~~~~v~l~~~~~ 423 (590)
+++|+|+|+|+.+++++++...+.
T Consensus 313 ~v~l~v~R~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 313 KVKLGLLRNGKPLEVEVTLDTSTS 336 (345)
T ss_dssp EEEEEEEETTEEEEEEEECEEC--
T ss_pred EEEEEEEECCEEEEEEEEEcccCC
Confidence 999999999999999999987654
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=3.7e-46 Score=386.19 Aligned_cols=299 Identities=22% Similarity=0.377 Sum_probs=255.1
Q ss_pred CCCCcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEE
Q 007765 100 GKTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRA 178 (590)
Q Consensus 100 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a 178 (590)
....++.++++++.+|||+|.+...... |+......+.||||+|+ +||||||+||+.++..+.|++. +++.+++
T Consensus 6 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a 80 (318)
T 1te0_A 6 ETPASYNLAVRRAAPAVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEA 80 (318)
T ss_dssp CCCCCCHHHHHHHGGGEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECT-TSCEEEE
T ss_pred cccccHHHHHHhcCCcEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEE
Confidence 3445678999999999999999764322 23333346889999999 6799999999999999999986 8899999
Q ss_pred EEEEecCCCCeEEEEecCCcccCcceeEEcCCC--CCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEE
Q 007765 179 QVEAVGHECDLAILIVESDEFWEGMHFLELGDI--PFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQ 256 (590)
Q Consensus 179 ~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~--~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~ 256 (590)
+++..|+.+||||||++.+. .+++++|+++ ...|++|+++|||++.. .+++.|+|+...+..+.. .....+++
T Consensus 81 ~v~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~-~~~~~~i~ 155 (318)
T 1te0_A 81 LLVGSDSLTDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNP-TGRQNFLQ 155 (318)
T ss_dssp EEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSS-CCEEEEEEEECCCCCCCT-TCSCCSEE
T ss_pred EEEEeCCCceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCC-CcEEeeEEecccccccCC-CCcCCEEE
Confidence 99999999999999999763 6889999875 36699999999999875 589999999877643321 12235789
Q ss_pred EcccccCCCCCceEE-eCCEEEEEEeeecC------CCCceeEEeehHHHHHHHHHHHHcCccccccccccceeeeccHh
Q 007765 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLS------GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQ 329 (590)
Q Consensus 257 ~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~------~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~ 329 (590)
+++++++|||||||+ .+|+||||+++... ...+++|+||++.+++++++|.++|++. ++|||+.++.+ ++.
T Consensus 156 ~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~ 233 (318)
T 1te0_A 156 TDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APL 233 (318)
T ss_dssp ESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCC
T ss_pred ECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chh
Confidence 999999999999999 89999999998765 2467899999999999999999999887 89999999998 778
Q ss_pred hhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 330 LRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 330 ~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
+++.+|++. ..|++|..|.++|||+++ |++||+|++|||++|.++.++. .++.....|++++|+|+|+
T Consensus 234 ~~~~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~ 302 (318)
T 1te0_A 234 HAQGGGIDQ-LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETM----------DQVAEIRPGSVIPVVVMRD 302 (318)
T ss_dssp CSSSSCSSS-CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHH----------HHHHTSCTTCEEEEEEESS
T ss_pred HHHhccCCC-CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEEEEC
Confidence 899999975 589999999999999999 9999999999999999987653 5666667899999999999
Q ss_pred CEEEEEEEEEecC
Q 007765 409 GKEHEFSITLRLL 421 (590)
Q Consensus 409 g~~~~~~v~l~~~ 421 (590)
|+.+++++++...
T Consensus 303 g~~~~~~v~~~~~ 315 (318)
T 1te0_A 303 DKQLTLQVTIQEY 315 (318)
T ss_dssp SCEEEEEEECEEC
T ss_pred CEEEEEEEEEccC
Confidence 9999999887654
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=3.9e-45 Score=382.88 Aligned_cols=299 Identities=27% Similarity=0.374 Sum_probs=249.0
Q ss_pred CCcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEE
Q 007765 102 TTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQV 180 (590)
Q Consensus 102 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~v 180 (590)
+....++++++.+|||.|.+.....+++..+. .....+.||||+|+ +||||||+||+.++..+.|.+. +++.+++++
T Consensus 16 e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~-~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~~ 93 (348)
T 3qo6_A 16 ELATVRLFQENTPSVVYITNLAVRQDAFTLDV-LEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLA-DQTTFDAKV 93 (348)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEECSSSCCE-EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEE
T ss_pred hhHHHHHHHHhCCCEEEEEEEeeccccccccc-ccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEEC-CCCEEEEEE
Confidence 44567899999999999998765433332111 11235789999999 6799999999999999999986 899999999
Q ss_pred EEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccc--cCcceeeEEE
Q 007765 181 EAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYV--HGATQLMAIQ 256 (590)
Q Consensus 181 v~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~--~~~~~~~~i~ 256 (590)
+..|+.+||||||++.+. ..+++++|+++. ..|+.|+++|||.+.. .+++.|+|+.+.+.... .+.....+++
T Consensus 94 v~~d~~~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 170 (348)
T 3qo6_A 94 VGFDQDKDVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLD-HTLTTGVISGLRREISSAATGRPIQDVIQ 170 (348)
T ss_dssp EEEEGGGTEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECCSSSSSCEEEEEE
T ss_pred EEEcCcCCEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCC-CcEeEEEEEeeccccccccCCCcccCEEE
Confidence 999999999999998752 268899998754 5699999999999876 48999999987664332 1223346799
Q ss_pred EcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHHHcCccccccccccceeeeccHhhhh
Q 007765 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRN 332 (590)
Q Consensus 257 ~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~ 332 (590)
+|+++|+|||||||+ .+|+||||+++... ...+++|+||++.++++++++.++|++. +||||+.+++. ...+
T Consensus 171 ~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~---~~~~ 246 (348)
T 3qo6_A 171 TDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD---QSVE 246 (348)
T ss_dssp ECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---TTTT
T ss_pred EeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---hhhh
Confidence 999999999999999 89999999998765 3468999999999999999999999998 99999998754 2344
Q ss_pred hcCCCCCcCceEEEEeCCCChhhhc-cCC-----------CCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCE
Q 007765 333 NFGMRSEVTGVLVNKINPLSDAHEI-LKK-----------DDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEK 400 (590)
Q Consensus 333 ~lgl~~~~~gv~V~~V~~~s~A~~a-L~~-----------GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~ 400 (590)
.+++ .|++|..|.++|||+++ |++ ||+|++|||++|.+|.++. ..+....+|++
T Consensus 247 ~~~~----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~----------~~l~~~~~g~~ 312 (348)
T 3qo6_A 247 QLGV----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLY----------RILDQCKVGDE 312 (348)
T ss_dssp TTTC----SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHH----------HHHTTCCTTCE
T ss_pred hcCC----ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHH----------HHHHhCCCcCE
Confidence 5554 69999999999999999 999 9999999999999998764 66666678999
Q ss_pred EEEEEEeCCEEEEEEEEEecCCC
Q 007765 401 SLVRVLRDGKEHEFSITLRLLQP 423 (590)
Q Consensus 401 v~l~V~R~g~~~~~~v~l~~~~~ 423 (590)
++|+|+|+|+.+++++++..++.
T Consensus 313 v~l~v~R~g~~~~~~v~l~~~~~ 335 (348)
T 3qo6_A 313 VTVEVLRGDHKEKISVTLEPKPD 335 (348)
T ss_dssp EEEEEECSSSEEEEEEECEECC-
T ss_pred EEEEEEECCEEEEEEEEEccCCC
Confidence 99999999999999999876643
No 8
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=3.9e-44 Score=371.88 Aligned_cols=290 Identities=29% Similarity=0.365 Sum_probs=236.6
Q ss_pred CcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEE
Q 007765 103 TNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVE 181 (590)
Q Consensus 103 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv 181 (590)
..+.++++++.+|||+|.+... .||.......+.||||+|+ +||||||+||+.++..+.|++. +++.++++++
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~-----~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~v~ 88 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDR-----HPFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLL-SGDTYEAVVT 88 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEE-----ETTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEec-----CccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEEEE
Confidence 4578999999999999998653 2454333345789999999 6799999999999999999986 8899999999
Q ss_pred EecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccC--cceeeEEEE
Q 007765 182 AVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG--ATQLMAIQI 257 (590)
Q Consensus 182 ~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~--~~~~~~i~~ 257 (590)
..|+.+||||||++.+. .+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+.....+ .....++++
T Consensus 89 ~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~ 164 (325)
T 1lcy_A 89 AVDPVADIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQ-NTITSGIVSSAQRPARDLGLPQTNVEYIQT 164 (325)
T ss_dssp EEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSS-SCCEEEEBCSCSCC---------CCCCEEE
T ss_pred EECCCCCEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCC-CcEEeEEEecccccccccCCCCCCCCEEEE
Confidence 99999999999999763 68899998753 5699999999999876 4889999998776422111 122357999
Q ss_pred cccccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHHHcC------ccccccccccceeeeccHhh
Q 007765 258 DAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVEHG------KYVGFCSLGLSCQTTENVQL 330 (590)
Q Consensus 258 ~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g------~~~~~~~lGi~~~~~~~~~~ 330 (590)
++.+|+|||||||+ .+|+||||+++... .+++|+||++.++++++++.+++ .+. ++|||+.++.+ ++.+
T Consensus 165 d~~~~~G~SGGPl~~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l-~~~~ 240 (325)
T 1lcy_A 165 DAAIDFGNAGGPLVNLDGEVIGVNTMKVT--AGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL-SPSI 240 (325)
T ss_dssp SSCCSTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-CHHH
T ss_pred cCCCCCCCccccEECCCCEEEEEEeEeec--CCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-CHHH
Confidence 99999999999999 89999999998763 57999999999999999987642 344 89999999998 7889
Q ss_pred hhhcCCCC-----CcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEE
Q 007765 331 RNNFGMRS-----EVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVR 404 (590)
Q Consensus 331 ~~~lgl~~-----~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~ 404 (590)
++.++++. ...|++|..|.++|||+++ |++||+|++|||++|.++.++. ..+. .++++.|+
T Consensus 241 ~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~----------~~l~---~~~~v~l~ 307 (325)
T 1lcy_A 241 LAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVY----------EAVR---TQSQLAVQ 307 (325)
T ss_dssp HHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----------HHHT---TCSSEEEE
T ss_pred HHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHH----------HHHh---CCCeEEEE
Confidence 99888853 2479999999999999999 9999999999999999987653 4443 36899999
Q ss_pred EEeCCEEEEEEEEEe
Q 007765 405 VLRDGKEHEFSITLR 419 (590)
Q Consensus 405 V~R~g~~~~~~v~l~ 419 (590)
|.|+|+.+++++++.
T Consensus 308 v~R~g~~~~~~v~~~ 322 (325)
T 1lcy_A 308 IRRGRETLTLYVTPE 322 (325)
T ss_dssp EEETTEEEEEEECCE
T ss_pred EEECCEEEEEEEEEe
Confidence 999999998887654
No 9
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=9.4e-43 Score=361.75 Aligned_cols=280 Identities=26% Similarity=0.356 Sum_probs=235.3
Q ss_pred CcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCc---------EEEEEEcCC
Q 007765 103 TNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADST---------FVLVRKHGS 172 (590)
Q Consensus 103 ~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~---------~i~V~~~~~ 172 (590)
.++.++++++.+|||+|.+... .....||||+|+ ++|||||+||+.+.. .+.|++. +
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~-~ 72 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFS-D 72 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEET-T
T ss_pred ccHHHHHHHhcCcEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeC-C
Confidence 5688999999999999987532 244789999999 589999999998765 7899986 8
Q ss_pred CcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccC--
Q 007765 173 PTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG-- 248 (590)
Q Consensus 173 ~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~-- 248 (590)
++.++++++.+|+.+||||||++.+. .+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+......
T Consensus 73 g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~G~vs~~~~~~~~~~~~ 148 (324)
T 1y8t_A 73 GRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLE-GTVTTGIVSALNRPVSTTGEA 148 (324)
T ss_dssp CCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECC----
T ss_pred CCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCC-CcEeeeEEeeccccccccccc
Confidence 89999999999999999999999763 68899998753 5699999999998875 4889999998765332111
Q ss_pred ---cceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecCC----------CCceeEEeehHHHHHHHHHHHHcCcccc
Q 007765 249 ---ATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLSG----------AENIGYIIPVPVIKHFITGVVEHGKYVG 314 (590)
Q Consensus 249 ---~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~----------~~~~~~aip~~~i~~~l~~l~~~g~~~~ 314 (590)
.....++++++.+|+|||||||+ .+|+||||+++.... ..+++|+||++.+++++++|+++|++.
T Consensus 149 g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~- 227 (324)
T 1y8t_A 149 GNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKAS- 227 (324)
T ss_dssp ---CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCC-
T ss_pred CcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCcc-
Confidence 12346899999999999999999 899999999987542 247899999999999999999999887
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVS 393 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~ 393 (590)
++|||+.++... ...|++|..|.++|||+++ ||+||+|++|||++|.+|.++. ..+.
T Consensus 228 ~~~lGi~~~~~~------------~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~----------~~l~ 285 (324)
T 1y8t_A 228 HASLGVQVTNDK------------DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALV----------AAVR 285 (324)
T ss_dssp CEECCEEEESCS------------SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHH----------HHHH
T ss_pred ccccceEeeecc------------CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHH
Confidence 899999987541 2479999999999999999 9999999999999999998653 5565
Q ss_pred ccCCCCEEEEEEEe-CCEEEEEEEEEecCC
Q 007765 394 MKKPNEKSLVRVLR-DGKEHEFSITLRLLQ 422 (590)
Q Consensus 394 ~~~~g~~v~l~V~R-~g~~~~~~v~l~~~~ 422 (590)
...+|++++|+|+| +|+.+++++++...+
T Consensus 286 ~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 286 SKAPGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp TSCTTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred hcCCCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 55689999999999 999999998887654
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=4.4e-43 Score=365.26 Aligned_cols=294 Identities=23% Similarity=0.375 Sum_probs=156.2
Q ss_pred CCcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEE
Q 007765 102 TTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQV 180 (590)
Q Consensus 102 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~v 180 (590)
...+.++++++.+|||+|.+.... ||.......+.||||+|+ +|||||||||+.++..+.|.+. +++.+++++
T Consensus 13 ~~~~~~~~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~-~g~~~~a~~ 86 (332)
T 3num_A 13 YNFIADVVEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAKI 86 (332)
T ss_dssp HCHHHHHHHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEET-TSCEEEEEE
T ss_pred cchHHHHHHHhcCcEEEEEEEecc-----ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEEC-CCCEEEEEE
Confidence 466889999999999999987642 555555567889999999 6799999999999999999986 889999999
Q ss_pred EEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccC--cceeeEEE
Q 007765 181 EAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG--ATQLMAIQ 256 (590)
Q Consensus 181 v~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~--~~~~~~i~ 256 (590)
+..|+.+||||||++.+. .++++.|+++. ..|++|+++|||.+.. .+++.|+|+...+...... .....+++
T Consensus 87 ~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 162 (332)
T 3num_A 87 KDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYIQ 162 (332)
T ss_dssp EEEETTTTEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC------CCEEEEEEEEC--------------CCEE
T ss_pred EEecCCCCeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCC-cceeeeEEEeecccccccCcCCCcCCEEE
Confidence 999999999999999764 67888888654 5699999999999876 4889999998765322111 12235689
Q ss_pred EcccccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHHH---cCc-cccccccccceeeeccHhhh
Q 007765 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE---HGK-YVGFCSLGLSCQTTENVQLR 331 (590)
Q Consensus 257 ~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~---~g~-~~~~~~lGi~~~~~~~~~~~ 331 (590)
+++.+++|||||||+ .+|+||||+++... .+++|+||++.++++++++.+ .|+ ...++|||+.++.+ ++..+
T Consensus 163 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~-~~~~~ 239 (332)
T 3num_A 163 TDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSL-TSSKA 239 (332)
T ss_dssp ESSCCCTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHCC---------------------------
T ss_pred EECCcCCCCcHHHhhCCCCcEEEEEeeEec--ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEec-CHHHh
Confidence 999999999999999 89999999998754 679999999999999998742 232 12389999999887 55554
Q ss_pred hhc-----CCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEE
Q 007765 332 NNF-----GMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRV 405 (590)
Q Consensus 332 ~~l-----gl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V 405 (590)
+.+ +++....|++|..|.++|||+++ |++||+|++|||++|.++.++. ..+. .|++++|+|
T Consensus 240 ~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~---~~~~v~l~v 306 (332)
T 3num_A 240 KELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVS----------DVIK---RESTLNMVV 306 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHH----------HHHh---CCCeEEEEE
Confidence 443 34444579999999999999999 9999999999999999998764 3332 378899999
Q ss_pred EeCCEEEEEEEEEecC
Q 007765 406 LRDGKEHEFSITLRLL 421 (590)
Q Consensus 406 ~R~g~~~~~~v~l~~~ 421 (590)
+|+|+.+++++++..+
T Consensus 307 ~R~g~~~~~~v~p~~~ 322 (332)
T 3num_A 307 RRGNEDIMITVIPEEI 322 (332)
T ss_dssp ----------------
T ss_pred EECCEEEEEEEEEeee
Confidence 9999998888877654
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.6e-33 Score=277.01 Aligned_cols=206 Identities=24% Similarity=0.380 Sum_probs=157.1
Q ss_pred CCcHHHHHHHhCCCcEEEEeeecCC------C----CC---CCccCCCCCCceEEEEEEe-C-CeEEEcCcccCCCcEEE
Q 007765 102 TTNAYAAIELALDSVVKIFTVSSSP------N----YG---LPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFVL 166 (590)
Q Consensus 102 ~~~~~~~~~~~~~sVV~I~~~~~~~------~----~~---~p~~~~~~~~~~GsGfiI~-~-g~IlT~aHvv~~~~~i~ 166 (590)
..++.++++++.+|||.|.+..... . ++ .||+......+.||||||+ + ||||||+|||.++..+.
T Consensus 12 ~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~ 91 (245)
T 3sti_A 12 LPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (245)
T ss_dssp CCBSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEE
T ss_pred CCCHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEE
Confidence 4578999999999999999876432 1 11 2444444457899999999 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccc
Q 007765 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (590)
Q Consensus 167 V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~ 244 (590)
|.+. +++.++++++..|+.+||||||++.+. .+++++|+++. ..|++|+++|||++.. .+++.|+|+...+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~~~~ 166 (245)
T 3sti_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSG 166 (245)
T ss_dssp EECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSC-CEEEEEEEEECSSCS
T ss_pred EEEC-CCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCC-CcEEeeEEeeecccc
Confidence 9986 899999999999999999999998653 68899998754 6699999999999976 489999999887752
Q ss_pred cccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHHHcCccc
Q 007765 245 YVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYV 313 (590)
Q Consensus 245 ~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~ 313 (590)
... .....++++|+++++|||||||+ .+|+||||+++... +..+++|+||++.+++++++|+++|++.
T Consensus 167 ~~~-~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~ 238 (245)
T 3sti_A 167 LNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL 238 (245)
T ss_dssp SCC-TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC
Confidence 221 22335789999999999999999 89999999998765 3468999999999999999999998876
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=4.8e-33 Score=275.58 Aligned_cols=213 Identities=30% Similarity=0.424 Sum_probs=163.4
Q ss_pred CcHHHHHHHhCCCcEEEEeeecCCCCC-----CCc-----cC----CCCC-CceEEEEEEe-CCeEEEcCcccCCCcEEE
Q 007765 103 TNAYAAIELALDSVVKIFTVSSSPNYG-----LPW-----QN----KSQR-ETTGSGFVIP-GKKILTNAHVVADSTFVL 166 (590)
Q Consensus 103 ~~~~~~~~~~~~sVV~I~~~~~~~~~~-----~p~-----~~----~~~~-~~~GsGfiI~-~g~IlT~aHvv~~~~~i~ 166 (590)
.++.++++++.+|||.|.+........ .|| .. .... .+.||||+|+ +||||||+||+.++..+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 468899999999999999976432110 111 10 0112 5779999999 589999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccc
Q 007765 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (590)
Q Consensus 167 V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~ 244 (590)
|.+. +++.++++++..|+.+||||||++.+. ..+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+..
T Consensus 84 V~~~-~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~-~~vt~Givs~~~r~~ 159 (239)
T 1l1j_A 84 VTML-DGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQ-HTVTVGVVSATNRRI 159 (239)
T ss_dssp EECT-TSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSS-CEEEEEEEEEEEEEE
T ss_pred EEEC-CCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCC-CcEEEEEEecccccc
Confidence 9986 889999999999999999999999752 268999998764 5699999999999876 489999999877642
Q ss_pred cccC--cceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC--CCCceeEEeehHHHHHHHHHHHHcCccccccccc
Q 007765 245 YVHG--ATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLG 319 (590)
Q Consensus 245 ~~~~--~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~--~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lG 319 (590)
.... ..+..++++|+++|+|||||||+ .+|+||||+++... +..+++|+||++.+++++++|+++|++. +||||
T Consensus 160 ~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r~~lG 238 (239)
T 1l1j_A 160 PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-KAYLG 238 (239)
T ss_dssp ECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred ccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-cceeC
Confidence 2111 12346899999999999999999 89999999998765 2358999999999999999999999988 99999
Q ss_pred c
Q 007765 320 L 320 (590)
Q Consensus 320 i 320 (590)
|
T Consensus 239 v 239 (239)
T 1l1j_A 239 V 239 (239)
T ss_dssp -
T ss_pred c
Confidence 6
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.97 E-value=4.6e-31 Score=261.59 Aligned_cols=204 Identities=23% Similarity=0.377 Sum_probs=170.8
Q ss_pred CCCCcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEE
Q 007765 100 GKTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRA 178 (590)
Q Consensus 100 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a 178 (590)
....++.++++++.+|||+|.+...... |.......+.||||+|+ +||||||+||+.+...+.|.+. +++.+++
T Consensus 17 ~~~~~~~~~~~~~~~sVV~I~~~~~~~~----~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~-~g~~~~a 91 (237)
T 3lgi_A 17 ETPASYNLAVRRAAPAVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEA 91 (237)
T ss_dssp CCCCBCHHHHHHHGGGEEEEEEECCTTT----CTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECT-TSCEEEE
T ss_pred cCCcCHHHHHHHhCCcEEEEEEEecccC----cccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeC-CCCEEEE
Confidence 3456788999999999999998765332 22334456789999999 6799999999999999999986 8899999
Q ss_pred EEEEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEE
Q 007765 179 QVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQ 256 (590)
Q Consensus 179 ~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~ 256 (590)
+++..|+.+||||||++.+. .+++++|+++. ..|+.|+++|||.+.. .+++.|+|+...+..... .....+++
T Consensus 92 ~vv~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~~~~g~vs~~~~~~~~~-~~~~~~i~ 166 (237)
T 3lgi_A 92 LLVGSDSLTDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNP-TGRQNFLQ 166 (237)
T ss_dssp EEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSC-SEEEEEEEEEECCSSCCT-TSCSCCEE
T ss_pred EEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCC-CcEEEEEEEecccccccC-CCcCCEEE
Confidence 99999999999999999763 57888898643 5699999999998866 489999999877654332 12235689
Q ss_pred EcccccCCCCCceEE-eCCEEEEEEeeecC------CCCceeEEeehHHHHHHHHHHHHcCccc
Q 007765 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLS------GAENIGYIIPVPVIKHFITGVVEHGKYV 313 (590)
Q Consensus 257 ~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~------~~~~~~~aip~~~i~~~l~~l~~~g~~~ 313 (590)
+|+.+++|||||||+ .+|+||||+++.+. ...+++|+||++.+++++++|.++|++.
T Consensus 167 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~ 230 (237)
T 3lgi_A 167 TDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI 230 (237)
T ss_dssp ECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC
T ss_pred EcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC
Confidence 999999999999999 89999999998765 2457899999999999999999999876
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.97 E-value=2.5e-30 Score=255.13 Aligned_cols=195 Identities=28% Similarity=0.428 Sum_probs=160.4
Q ss_pred CCcHHHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEE
Q 007765 102 TTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQV 180 (590)
Q Consensus 102 ~~~~~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~v 180 (590)
...+.++++++.+|||+|.+.... ||.......+.||||+|+ +|||||||||+.+...+.|.+. +++.+.+++
T Consensus 30 ~~~~~~~~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~-~g~~~~a~v 103 (231)
T 3tjo_A 30 YNFIADVVEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAKI 103 (231)
T ss_dssp SCHHHHHHHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECT-TSCEEEEEE
T ss_pred hhHHHHHHHHhcCcEEEEEEEecc-----ccCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcC-CCCEEEEEE
Confidence 567889999999999999987642 444444445789999999 5799999999999999999986 889999999
Q ss_pred EEecCCCCeEEEEecCCcccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccC--cceeeEEE
Q 007765 181 EAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG--ATQLMAIQ 256 (590)
Q Consensus 181 v~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~--~~~~~~i~ 256 (590)
+..|+.+||||||++.+. .++++.|++.. ..|++|+++|||.+.. .+++.|+|+...+.....+ .....+++
T Consensus 104 ~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 179 (231)
T 3tjo_A 104 KDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYIQ 179 (231)
T ss_dssp EEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTE-EEEEEEEEEECC-------------CCEE
T ss_pred EEecCCCCEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCC-CceeeEEEeeccccccccccCCCcccEEE
Confidence 999999999999999763 67888887654 5699999999998876 4889999998766432211 12235689
Q ss_pred EcccccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHHH
Q 007765 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 257 ~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (590)
+++.+++|||||||+ .+|+||||+++... .+++|+||++.++++|+++++
T Consensus 180 ~da~i~~G~SGGPLv~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 180 TDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp ESSCCCTTTTTSEEECTTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHHT
T ss_pred EcCCcCCCCchhHeecCCCeEEEEEeEEec--CCeEEEEEHHHHHHHHHHHhh
Confidence 999999999999999 89999999998754 579999999999999999864
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.95 E-value=9.8e-28 Score=237.68 Aligned_cols=190 Identities=27% Similarity=0.371 Sum_probs=155.1
Q ss_pred HHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecC
Q 007765 106 YAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGH 185 (590)
Q Consensus 106 ~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~ 185 (590)
.++++++.+|||+|...... ....+.||||+|+++||||||||+.+...+.|.+. + ..+.++++..|+
T Consensus 34 ~~~~~~~~~svV~I~~~~~~----------~~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~-~-~~~~~~~v~~~~ 101 (237)
T 3k6y_A 34 NPVVAATEPSVVKIRSLAPR----------CQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG-D-KPFEATVVSYDP 101 (237)
T ss_dssp CHHHHHHGGGEEEEEEEEGG----------GTEEEEEEEEEEETTEEEECGGGTTTCSEEEEEET-T-EEEECEEEEEET
T ss_pred HHHHHHhcCCEEEEEEEecC----------CCcceeEEEEEEECCEEEECHHHcCCCceEEEEEC-C-cEEEEEEEEEcC
Confidence 46789999999999986531 23457899999999999999999999999999986 4 589999999999
Q ss_pred CCCeEEEEecCCcccCcceeEEcCCC-CCCCCeEEEEecCCCCCCceEEEeEEecccc----cccccCc-ceeeEEEEcc
Q 007765 186 ECDLAILIVESDEFWEGMHFLELGDI-PFLQQAVAVVGYPQGGDNISVTKGVVSRVEP----TQYVHGA-TQLMAIQIDA 259 (590)
Q Consensus 186 ~~DlAlLkv~~~~~~~~~~~~~l~~~-~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~----~~~~~~~-~~~~~i~~~~ 259 (590)
.+||||||++.. .+++++|++. ...|+.|+++|||.+.. ...+.|.++...+ ..+..+. ....++++++
T Consensus 102 ~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~-~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 102 SVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGN-FTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp TTTEEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCS-CEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred CCCEEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCC-CccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 999999999954 6888888743 36699999999998876 3777777765432 2222222 3345789999
Q ss_pred cccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHHHcCcc
Q 007765 260 AINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVEHGKY 312 (590)
Q Consensus 260 ~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~ 312 (590)
.+++|||||||+ .+|+||||+++...+.++++|+||++.++++++++.....+
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~~~~~~~aip~~~v~~~l~~~~~~~~v 230 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPV 230 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSSSTTEEEEEEHHHHHGGGGGTTCCSCC
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccCCCcEEEEEEHHHHHHHHHHccCCCCC
Confidence 999999999999 89999999999887777899999999999999998544433
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.88 E-value=1.2e-22 Score=197.31 Aligned_cols=179 Identities=26% Similarity=0.476 Sum_probs=137.3
Q ss_pred CCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCc---EEEEEEc---CCCcEEEEE-EEEecC
Q 007765 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST---FVLVRKH---GSPTKYRAQ-VEAVGH 185 (590)
Q Consensus 113 ~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~---~i~V~~~---~~~~~~~a~-vv~~d~ 185 (590)
.+++|+|.... ..||+... ....|+||+|+++||||||||+.+.. .+.|.+. .+++.+.++ ++.+|+
T Consensus 2 ~~~~~~i~~~~-----~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~ 75 (210)
T 2as9_A 2 EKNVTQVKDTN-----NFPYNGVV-SFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPG 75 (210)
T ss_dssp CCCEEECSCTT-----STTGGGEE-ECSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSS
T ss_pred CCceEEeecCC-----cCCeEEEE-EeeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCC
Confidence 35777775422 34887744 34679999999999999999997543 5666531 367788884 788889
Q ss_pred CCCeEEEEecCC---------cccCcceeEEcCCCCCCCCeEEEEecCCCCCC---ceEEEeEEecccccccccCcceee
Q 007765 186 ECDLAILIVESD---------EFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLM 253 (590)
Q Consensus 186 ~~DlAlLkv~~~---------~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~---~~v~~G~Vs~~~~~~~~~~~~~~~ 253 (590)
..||||||++.+ .|.+.++++.|++....|+.|+++|||.+... +.++.|+|+.... .
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~~----------~ 145 (210)
T 2as9_A 76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKD----------N 145 (210)
T ss_dssp SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEET----------T
T ss_pred CCcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEccccC----------C
Confidence 999999999873 23345778888755567999999999986432 2457788876421 3
Q ss_pred EEEEcccccCCCCCceEE-eCCEEEEEEeeecC--CCCceeEEeehHHHHHHHHHHH
Q 007765 254 AIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 254 ~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (590)
.+++++.+|+|||||||+ .+|+||||++++.. +.++.+|++|.+.|++|++...
T Consensus 146 ~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~ 202 (210)
T 2as9_A 146 ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHI 202 (210)
T ss_dssp EEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTC
T ss_pred eEEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhh
Confidence 467889999999999999 79999999998775 4466789999999999999764
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.87 E-value=1.1e-21 Score=181.97 Aligned_cols=137 Identities=30% Similarity=0.363 Sum_probs=105.8
Q ss_pred CCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCCCCCCe
Q 007765 138 RETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQA 217 (590)
Q Consensus 138 ~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~ 217 (590)
..+.||||+| +|+||||+|||+++..+.|++ +++.++|+++ .|+..||||||++... ..+.+++|+++... ++
T Consensus 19 ~~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SC 91 (163)
T ss_dssp TTEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TE
T ss_pred CceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CE
Confidence 4578999999 999999999999999999998 8899999999 8999999999999753 24566778876554 88
Q ss_pred EEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeeh
Q 007765 218 VAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 218 V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
|+++|+|.+....+...+.+. + ..+.+++++++|||||||+ .+|+||||++... +..+ +|+|..
T Consensus 92 v~~~G~p~~~~~~s~~~~~~~---------g----~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~-g~~g-g~ai~~ 156 (163)
T 2w5e_A 92 VTVMAYVNEDLVVSTAAAMVY---------G----NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT-GYTG-GAVIID 156 (163)
T ss_dssp EEEEEEETTEEEEEEEEEEEE---------T----TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE-TTEE-EEEECC
T ss_pred EEEEEeCCCCEEEEEeccEEc---------C----CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc-cccc-CEEEec
Confidence 999999976211111112111 1 1356779999999999999 9999999998754 3334 777753
No 18
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.82 E-value=1.9e-20 Score=180.11 Aligned_cols=166 Identities=22% Similarity=0.433 Sum_probs=119.9
Q ss_pred CCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcE----EEEEE---cCCCcEEEE-EEEEecCCCCeEEEEecCC---
Q 007765 129 GLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTF----VLVRK---HGSPTKYRA-QVEAVGHECDLAILIVESD--- 197 (590)
Q Consensus 129 ~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~----i~V~~---~~~~~~~~a-~vv~~d~~~DlAlLkv~~~--- 197 (590)
..||+.... ...|+||+|+++||||||||+.+... +.|.. ..+++.+.+ +++.+|+.+||||||++.+
T Consensus 12 ~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~ 90 (200)
T 2w7s_A 12 KEPYNSVVA-FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTE 90 (200)
T ss_dssp STTGGGEEE-ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTT
T ss_pred cCCcccccc-cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCC
Confidence 457876443 36799999999999999999975433 55543 135677877 5778889999999999874
Q ss_pred --cccCcceeEEcCCCCCCCCeEEEEecCCCCCC---ceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-
Q 007765 198 --EFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI- 271 (590)
Q Consensus 198 --~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~---~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~- 271 (590)
.|.+.++|+.|.+....|+.++++|||.+... ..++.|+++.... .++++++.+|+|||||||+
T Consensus 91 ~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSGGPl~~ 160 (200)
T 2w7s_A 91 GLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG----------TFMEFDAYAQPGNSGSPVLN 160 (200)
T ss_dssp SCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEET----------TEEEECSCCCTTCTTCEEEC
T ss_pred cccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCC----------CEEEEcceeCCCCccCeEEC
Confidence 24456888888755567999999999975321 2457788775321 2467888999999999999
Q ss_pred eCCEEEEEEeeecCCC-CceeEEe-ehHHHHHHHHH
Q 007765 272 MGNKVAGVAFQNLSGA-ENIGYII-PVPVIKHFITG 305 (590)
Q Consensus 272 ~~G~vVGI~~~~~~~~-~~~~~ai-p~~~i~~~l~~ 305 (590)
.+|+||||++++.... ...++.+ ....+++++++
T Consensus 161 ~~g~lvGI~s~g~~~~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 161 SKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp TTSCEEEEEEEEC----CCCEEEEECCHHHHHHHHH
T ss_pred cCCEEEEEEeccccCCCCccceeeecHHHHHHHHHh
Confidence 7999999999986532 3456666 44555555554
No 19
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.82 E-value=5.5e-20 Score=182.41 Aligned_cols=157 Identities=18% Similarity=0.261 Sum_probs=114.5
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcE--EEEEEc-CC-----C------cEEEEEEEEecC---CCCeEEEEecCCc----
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTF--VLVRKH-GS-----P------TKYRAQVEAVGH---ECDLAILIVESDE---- 198 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~--i~V~~~-~~-----~------~~~~a~vv~~d~---~~DlAlLkv~~~~---- 198 (590)
..|+||+|+++||||||||+.+... +.|.+. +. + ..+.++.+..|+ .+||||||++.+.
T Consensus 55 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~~ 134 (242)
T 1agj_A 55 TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGVS 134 (242)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSCC
T ss_pred ccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcccc
Confidence 6899999999999999999986432 334432 01 1 357888888888 8999999999763
Q ss_pred ccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCE
Q 007765 199 FWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNK 275 (590)
Q Consensus 199 ~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~ 275 (590)
+.+.++++.|++.. ..|+.++++|||.+.....+....+.-... . ..+++++.+|+|||||||+ .+|+
T Consensus 135 ~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~~---~------~~~~~~~~~c~GdSGGPl~~~~g~ 205 (242)
T 1agj_A 135 LGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTTL---S------RGLRYYGFTVPGNSGSGIFNSNGE 205 (242)
T ss_dssp HHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECCG---G------GSEEEECCCCGGGTTCEEECTTSE
T ss_pred ccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEecC---C------ceEEEeCCcCCCCCchHhcccCCE
Confidence 23458899997543 569999999999875432233333321111 0 1256778899999999999 7999
Q ss_pred EEEEEeeecC---CCCceeEEeehH-HHHHHHHH
Q 007765 276 VAGVAFQNLS---GAENIGYIIPVP-VIKHFITG 305 (590)
Q Consensus 276 vVGI~~~~~~---~~~~~~~aip~~-~i~~~l~~ 305 (590)
||||++++.. +..+.+|++|++ .++++|++
T Consensus 206 lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~ 239 (242)
T 1agj_A 206 LVGIHSSKVSHLDREHQINYGVGIGNYVKRIINE 239 (242)
T ss_dssp EEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHH
T ss_pred EEEEEeccccccCcCCCceeeEEehHHHHHHHHh
Confidence 9999998765 235789999985 78888876
No 20
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.79 E-value=5.4e-19 Score=170.25 Aligned_cols=167 Identities=25% Similarity=0.376 Sum_probs=118.9
Q ss_pred CCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCc---EEEEEE---cCCCcEEE-EEEEEecCCCCeEEEEecCCc---
Q 007765 129 GLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST---FVLVRK---HGSPTKYR-AQVEAVGHECDLAILIVESDE--- 198 (590)
Q Consensus 129 ~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~---~i~V~~---~~~~~~~~-a~vv~~d~~~DlAlLkv~~~~--- 198 (590)
..||+... ....|+||+|+++||||||||+.+.. .+.+.. ..++..+. .+++.+++.+||||||++.+.
T Consensus 12 ~~P~~~~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~ 90 (204)
T 2vid_A 12 IFPYTGVV-AFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIER 90 (204)
T ss_dssp STTGGGEE-ECSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEE
T ss_pred cCchhheE-EeeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccc
Confidence 45787643 23679999999999999999998654 555532 12455666 567777889999999998631
Q ss_pred ------ccCcceeEEcCCCCCCCCeEEEEecCCCCCC---ceEEEeEEecccccccccCcceeeEEEEcccccCCCCCce
Q 007765 199 ------FWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGP 269 (590)
Q Consensus 199 ------~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~---~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGP 269 (590)
|.+.+.|+.|.+....|+.++++|||.+... +....|.++.... ..++.+...|+||||||
T Consensus 91 ~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSGGP 160 (204)
T 2vid_A 91 GPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG----------SSIVYSAHTESGNSGSP 160 (204)
T ss_dssp ETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET----------TEEEECCCCCGGGTTCE
T ss_pred ccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC----------CeEEEecccCCCCccCc
Confidence 2234678888765567999999999986542 2456677765321 24677888999999999
Q ss_pred EE-eCCEEEEEEeeecC--CCCceeEEe-ehHHHHHHHHHH
Q 007765 270 AI-MGNKVAGVAFQNLS--GAENIGYII-PVPVIKHFITGV 306 (590)
Q Consensus 270 l~-~~G~vVGI~~~~~~--~~~~~~~ai-p~~~i~~~l~~l 306 (590)
|+ .+|+||||++++.. +....+|.+ +...+++++++.
T Consensus 161 l~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 161 VLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp EECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred EECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 99 79999999998764 334456655 335666666653
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.78 E-value=4e-18 Score=172.11 Aligned_cols=171 Identities=23% Similarity=0.285 Sum_probs=123.2
Q ss_pred CCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCc----EEEEEEc-------CCCcEEEEEEE
Q 007765 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST----FVLVRKH-------GSPTKYRAQVE 181 (590)
Q Consensus 113 ~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~----~i~V~~~-------~~~~~~~a~vv 181 (590)
-+++|+|..... .....|+||+|+++||||||||+.+.. .+.|.+. .++....++++
T Consensus 19 ~~~~v~i~~~~~------------~~~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~ 86 (274)
T 2o8l_A 19 YAPVTYIQVEAP------------TGTFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQIT 86 (274)
T ss_dssp GTTEEEEEEEET------------TEEEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEE
T ss_pred cceEEEEEEEcC------------CCCEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEE
Confidence 456677765321 133679999999999999999997654 3777642 23444556677
Q ss_pred EecCCCCeEEEEecCCc----ccCcceeEEcCCCC--CCCCeEEEEecCCCCCC--ceEEEeEEecccccccccCcceee
Q 007765 182 AVGHECDLAILIVESDE----FWEGMHFLELGDIP--FLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLM 253 (590)
Q Consensus 182 ~~d~~~DlAlLkv~~~~----~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~--~~v~~G~Vs~~~~~~~~~~~~~~~ 253 (590)
..+..+||||||++.+. |...+.++.|+... ..|+.++++|||.+... .....|.++.+.. .
T Consensus 87 ~~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~ 156 (274)
T 2o8l_A 87 KYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG----------E 156 (274)
T ss_dssp ECSSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------T
T ss_pred eCCCCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC----------C
Confidence 77888999999999763 45578999998643 56999999999976432 2345666664321 2
Q ss_pred EEEEcccccCCCCCceEE-eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHH
Q 007765 254 AIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 254 ~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l 306 (590)
+++.++.+|+|+|||||+ .+|+||||++++.....+.++.+. ..+..++++.
T Consensus 157 ~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~~~~~~~~~-~~~~~wI~~~ 209 (274)
T 2o8l_A 157 AMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNEFNGAVFIN-ENVRNFLKQN 209 (274)
T ss_dssp EEEESCCCCTTCTTCEEECTTSCEEEEEEEEETTTEEEEEECC-HHHHHHHHHH
T ss_pred eEEeCcccCCCCchhheeccCCeEEEEEeCcccCCCCceEEec-HHHHHHHHHH
Confidence 467788999999999999 799999999998654445566663 5556666654
No 22
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.77 E-value=5e-18 Score=170.88 Aligned_cols=158 Identities=24% Similarity=0.319 Sum_probs=116.7
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCc----EEEEEEc-------CCCcEEEEEEEEecCCCCeEEEEecCCc----ccCcc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADST----FVLVRKH-------GSPTKYRAQVEAVGHECDLAILIVESDE----FWEGM 203 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~----~i~V~~~-------~~~~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~~ 203 (590)
...|+||+|+++||||||||+.+.. .+.|.+. .+++...++++..+..+||||||++.+. |...+
T Consensus 33 ~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (268)
T 1wcz_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (268)
T ss_dssp EEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHS
T ss_pred CEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccccccc
Confidence 3679999999999999999997643 3777652 2344455667777888999999999763 34468
Q ss_pred eeEEcCCCC--CCCCeEEEEecCCCCCC--ceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEE
Q 007765 204 HFLELGDIP--FLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAG 278 (590)
Q Consensus 204 ~~~~l~~~~--~~G~~V~~iG~p~g~~~--~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVG 278 (590)
.++.|+... ..|+.++++|||.+... ...+.|+++.+.. .+++.++.+|+|+|||||+ .+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (268)
T 1wcz_A 113 KPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (268)
T ss_dssp CCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESBCCCTTCTTCEEECTTSCEEE
T ss_pred ceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCC----------CeEEEecccCCCCccCeEEccCCEEEE
Confidence 888887643 56999999999976432 3446677664321 2467788999999999999 7999999
Q ss_pred EEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 279 VAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 279 I~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
|++++.....+.++++. ..+..++++..
T Consensus 183 IvS~G~~~~~~~~~~~~-~~~~~wI~~~i 210 (268)
T 1wcz_A 183 IHWGGVPNEFNGAVFIN-ENVRNFLKQNI 210 (268)
T ss_dssp EEEEEETTTEEEEEECC-HHHHHHHHHHC
T ss_pred EEeCCccCCcceeEEcC-HHHHHHHHHHH
Confidence 99998654445666664 55666666543
No 23
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.77 E-value=1.6e-18 Score=167.94 Aligned_cols=161 Identities=12% Similarity=0.057 Sum_probs=125.4
Q ss_pred cCceEEEEeCCCChhhhc-cCCC-CEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKD-DIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSIT 417 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~G-D~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~ 417 (590)
..|++|..|.++|||+++ |++| |+|++|||++|.+|.++. ..+.....|++++++|+|+++....+++
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~~~~~v~ 84 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTL----------KDLLKANVEKPVKMLIYSSKTLELRETS 84 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHH----------HHHHHHTTTSCEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHH----------HHHHhcCCCCEEEEEEEecCCceEEEEE
Confidence 579999999999999999 9999 999999999999998764 3333446799999999997655555555
Q ss_pred EecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeecccccc
Q 007765 418 LRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAG 497 (590)
Q Consensus 418 l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g 497 (590)
+.+... . ....++|+.+..+++.. ....+++|..|.+++||+.
T Consensus 85 l~p~~~------~----~~~~~lGi~~~~~~~~~---------------------------~~~~Gv~V~~V~~~spA~~ 127 (209)
T 3rle_A 85 VTPSNL------W----GGQGLLGVSIRFCSFDG---------------------------ANENVWHVLEVESNSPAAL 127 (209)
T ss_dssp ECCCSS------S----SSSSSSCEEEEEEECTT---------------------------GGGSCEEEEEECTTSHHHH
T ss_pred Eccccc------c----cccCccceEEeecChhH---------------------------ccccceEEEEeCCCChHHH
Confidence 532211 0 11235788887665421 1126789999999999999
Q ss_pred ccccC-CceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCCC---eEEEEEech
Q 007765 498 YERFA-DLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDDD---RVVVLNYDV 548 (590)
Q Consensus 498 ~~~~~-gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~---~~i~l~~~~ 548 (590)
+|+++ ||+|++|||+ |.++++|.+++++++++.+.|++.|+ ..+.+...+
T Consensus 128 aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 128 AGLRPHSDYIIGADTV-MNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp HTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTTSCEEEEEEETTTTEEEEEEECC
T ss_pred CCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCCCeEEEEEEECCceEEEEEEEEe
Confidence 99999 9999999998 99999999999999999999999663 334444444
No 24
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.76 E-value=1.4e-19 Score=162.75 Aligned_cols=122 Identities=25% Similarity=0.319 Sum_probs=107.2
Q ss_pred CceeEEeehHHHHHHHHHHHHcCccccccccccceeeecc--HhhhhhcCCCC-CcCceEEEEeCCCChhhhc-cCCCCE
Q 007765 288 ENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTEN--VQLRNNFGMRS-EVTGVLVNKINPLSDAHEI-LKKDDI 363 (590)
Q Consensus 288 ~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~--~~~~~~lgl~~-~~~gv~V~~V~~~s~A~~a-L~~GD~ 363 (590)
+++|||||++.+++++++|.++|++. +||||+.++++.. +.+++.+|++. ...|++|..|.++|||+ + |++||+
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~GD~ 79 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDV 79 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCSSCE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCCCCE
Confidence 57999999999999999999999988 9999999998843 37888899974 25899999999999999 9 999999
Q ss_pred EEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecC
Q 007765 364 ILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLL 421 (590)
Q Consensus 364 Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 421 (590)
|++|||++|.+|.++. ..+....+|++++|+|+|+|+.+++++++...
T Consensus 80 I~~inG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 127 (134)
T 2l97_A 80 ITKVDDKEIASSTDLQ----------SALYNHSIGDTIKITYYRNGKEETTSIKLNKL 127 (134)
T ss_dssp EEEETTEECCCHHHHH----------HHHHHSSTTCEEEEEEEETTEEEEEEEECCCC
T ss_pred EEEECCEEcCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEccc
Confidence 9999999999998653 55655568999999999999999998887654
No 25
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.75 E-value=1.9e-17 Score=158.61 Aligned_cols=150 Identities=17% Similarity=0.107 Sum_probs=115.0
Q ss_pred EEEEEEeC---CeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCcccCccee-------EEcCC
Q 007765 142 GSGFVIPG---KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDEFWEGMHF-------LELGD 210 (590)
Q Consensus 142 GsGfiI~~---g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~~-------~~l~~ 210 (590)
.+||++.+ ++||||+||+.+...+. . + ..+.++++..| +..|+||||++.+.. ..+. +.+..
T Consensus 18 T~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~-~-~~~~g~vv~~~~~~~D~Avi~i~~~~~--~~~~v~~~g~~~~v~g 90 (198)
T 2h5c_A 18 SVGFSVTRGATKGFVTAGHCGTVNATAR---I-G-GAVVGTFAARVFPGNDRAWVSLTSAQT--LLPRVANGSSFVTVRG 90 (198)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTTCEEE---E-T-TEEEEEEEEEECSBSCEEEEEECTTSE--EEEEEEETTEEEECCB
T ss_pred CcCEEEecCCeeEEEECcccCCCCCEEE---e-C-CcEEEEEEecCCCCCCEEEEEeCCCCc--cCceEecCCceEEecC
Confidence 46999974 59999999999888776 3 4 48889999999 999999999987521 1222 23433
Q ss_pred --CCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeec-CC
Q 007765 211 --IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNL-SG 286 (590)
Q Consensus 211 --~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~-~~ 286 (590)
...+|++|..+|+|.+ ++.|+|+.+++...........++++++.+++|||||||+ .+|++|||+++.. ..
T Consensus 91 ~~~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~ 165 (198)
T 2h5c_A 91 STEAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQS 165 (198)
T ss_dssp CCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCT
T ss_pred cccCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCcc
Confidence 3477999999999765 5789999887643322222446799999999999999999 9999999999974 21
Q ss_pred ---------CCceeEEeehHHHHHHH
Q 007765 287 ---------AENIGYIIPVPVIKHFI 303 (590)
Q Consensus 287 ---------~~~~~~aip~~~i~~~l 303 (590)
..+.+|++|++.+++.+
T Consensus 166 ~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 166 NGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp TSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CCCccccccCCceEEEEEHHHHHHHC
Confidence 23689999999877654
No 26
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.72 E-value=2.7e-18 Score=170.68 Aligned_cols=143 Identities=20% Similarity=0.236 Sum_probs=102.0
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCc----EEEEEEcC--C---------CcEEEEEEEEecC---CCCeEEEEecCCc--
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADST----FVLVRKHG--S---------PTKYRAQVEAVGH---ECDLAILIVESDE-- 198 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~----~i~V~~~~--~---------~~~~~a~vv~~d~---~~DlAlLkv~~~~-- 198 (590)
...|+||+|+++||||||||+.+.. .+.+.... . ...+.++.+..|+ .+|||||+++.+.
T Consensus 47 ~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~~ 126 (246)
T 1qtf_A 47 STLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKG 126 (246)
T ss_dssp TEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCccc
Confidence 4689999999999999999998654 36665421 0 1478888888888 9999999999763
Q ss_pred --ccCcceeEEcCCCC--CCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eC
Q 007765 199 --FWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MG 273 (590)
Q Consensus 199 --~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~ 273 (590)
+...++++.|++.. ..|+.|+++|||.+..........+.... .+++++.+|+|||||||+ .+
T Consensus 127 ~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~------------~~~~~~~~~~GdSGGPlv~~~ 194 (246)
T 1qtf_A 127 ESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN------------DSQYFGYTEVGNSGSGIFNLK 194 (246)
T ss_dssp CCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS------------SSBEESCCCGGGTTCEEECTT
T ss_pred cccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC------------cEEEeCCCCCCCchhheECCC
Confidence 33357888887543 56999999999987543212222121110 123456789999999999 79
Q ss_pred CEEEEEEeeecCCCCceeEEeehHH
Q 007765 274 NKVAGVAFQNLSGAENIGYIIPVPV 298 (590)
Q Consensus 274 G~vVGI~~~~~~~~~~~~~aip~~~ 298 (590)
|+||||++++.. ++++|++.
T Consensus 195 g~lvGI~s~g~~-----~~~ipi~~ 214 (246)
T 1qtf_A 195 GELIGIHSGKGG-----QHNLPIGV 214 (246)
T ss_dssp CCEEEEEEEEET-----TTTEEEEE
T ss_pred CEEEEEEecccc-----Cccccchh
Confidence 999999998642 35555433
No 27
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.71 E-value=1.1e-16 Score=152.92 Aligned_cols=149 Identities=15% Similarity=0.160 Sum_probs=115.3
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC--EEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG--KEHEFS 415 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g--~~~~~~ 415 (590)
..|++|..|.|+|||+++ |++||+|++|||+++.+|.+.. ........|+.+.++|.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA----------AVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 468999999999999987 9999999999999999997643 22223346899999999977 455566
Q ss_pred EEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeecccc
Q 007765 416 ITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDIN 495 (590)
Q Consensus 416 v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a 495 (590)
+.+..... .+||.+..... ....+...+++|..|.++++|
T Consensus 104 v~l~~~~~---------------~lG~~~~~~~~-------------------------~~~~~~~~gv~V~~V~~gs~A 143 (196)
T 3gsl_A 104 IKLIKGPK---------------GLGFSIAGGVG-------------------------NQHIPGDNSIYVTKIIEGGAA 143 (196)
T ss_dssp EEEEEBTT---------------BSCEEEEESBT-------------------------SCSBTTBCCEEEEEECTTSHH
T ss_pred EEEecCCC---------------CceEEEEccCC-------------------------CcCCCCCCCEEEEEECCCChH
Confidence 66654322 23666554221 011223467899999999999
Q ss_pred cccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 496 AGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 496 ~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+.+| +++||+|++|||++|.+ |.++.+++++ .++.+.|.+.|+
T Consensus 144 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 189 (196)
T 3gsl_A 144 HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN-TYDVVYLKVAKP 189 (196)
T ss_dssp HHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS-CCEEEEEEEEEE
T ss_pred HhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc-CCCeEEEEEeCC
Confidence 9999 99999999999999999 9999999975 467788887763
No 28
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.70 E-value=1.4e-16 Score=151.26 Aligned_cols=158 Identities=18% Similarity=0.198 Sum_probs=111.0
Q ss_pred ceEE-EEEEe---CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecC-C-cccCcceeEEcCC--
Q 007765 140 TTGS-GFVIP---GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVES-D-EFWEGMHFLELGD-- 210 (590)
Q Consensus 140 ~~Gs-GfiI~---~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~-~-~~~~~~~~~~l~~-- 210 (590)
..|| ||++. ++|||||+||+.+...+.+... +... .+++...+ +.+||||||++. + .+.+.++++.+..
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~-~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSA-RTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTT-SCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCC-CceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 4677 99997 3599999999999888776532 3333 35556666 889999999997 4 3444567777763
Q ss_pred CCCCCCeEEEEecCCCCCCceEEEeEEecccccccc-cCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecC--CC
Q 007765 211 IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYV-HGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS--GA 287 (590)
Q Consensus 211 ~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~-~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~--~~ 287 (590)
....|+.+.++||+.+ .+.|.+..++..... ....+...++.+...|+|||||||+.++++|||+++... ..
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~~~~vGI~s~g~~~~~~ 164 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSGTRAIGLTSGGSGNCSS 164 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEETTT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEECCEEEEEEEecCCCCCC
Confidence 3467999999999643 345666654432111 111122356677778999999999955699999998754 22
Q ss_pred CceeEEeehHHHHHHHH
Q 007765 288 ENIGYIIPVPVIKHFIT 304 (590)
Q Consensus 288 ~~~~~aip~~~i~~~l~ 304 (590)
...+++.|++.++++++
T Consensus 165 ~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 165 GGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEEEHHHHHHHHT
T ss_pred CCcEEEEEHHHHHHhhC
Confidence 35789999988777764
No 29
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.70 E-value=3.6e-16 Score=148.62 Aligned_cols=154 Identities=19% Similarity=0.180 Sum_probs=111.1
Q ss_pred ceEE-EEEEe-C--CeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCcccCcceeE--------
Q 007765 140 TTGS-GFVIP-G--KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDEFWEGMHFL-------- 206 (590)
Q Consensus 140 ~~Gs-GfiI~-~--g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~~~-------- 206 (590)
..|| ||++. + +|||||+||+.+...+.+ . ++....+++...+ +..|+||||++.+.. ..+.+
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~~--~-~~~~~~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~ 86 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWSA--S-SGGSVVGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQ 86 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEES--S-TTCCEEEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEE
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEEe--C-CCceeEEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCcee
Confidence 3455 99998 3 499999999998877653 2 5545556666555 788999999987421 11233
Q ss_pred EcC--CCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeec
Q 007765 207 ELG--DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNL 284 (590)
Q Consensus 207 ~l~--~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~ 284 (590)
++. ..+.+|+.|.++|++.+ .+.|+|+.+++...........++++++.+++|||||||+..+++|||+++..
T Consensus 87 ~i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~~~~vGi~s~~~ 161 (187)
T 1hpg_A 87 DISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAGSVALGIHSGSS 161 (187)
T ss_dssp ECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEETTEEEEEEEEES
T ss_pred eeccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEECCEEEEEEEeeC
Confidence 333 23467999999999854 57889988776543222234467999999999999999996679999999875
Q ss_pred C--CCCceeEEeehHHHHHHH
Q 007765 285 S--GAENIGYIIPVPVIKHFI 303 (590)
Q Consensus 285 ~--~~~~~~~aip~~~i~~~l 303 (590)
. ...+.+|++|++.+++.+
T Consensus 162 ~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 162 GCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CCBTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCCCceEEEEHHHHHHHc
Confidence 3 223689999998876544
No 30
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.70 E-value=4.9e-16 Score=147.64 Aligned_cols=151 Identities=18% Similarity=0.144 Sum_probs=111.6
Q ss_pred eEEEEEEe--CC--eEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccCcc------eeEEc
Q 007765 141 TGSGFVIP--GK--KILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGM------HFLEL 208 (590)
Q Consensus 141 ~GsGfiI~--~g--~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~-~~~~~------~~~~l 208 (590)
=.+||++. +| +||||+||+.+...+. .. | +.++++..| +..|+||||++.+. ....+ .++++
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v~--~~-d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGTQVS--IG-N---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTCEEE--ET-T---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCCEEE--ec-C---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 35799996 77 9999999997766543 33 4 889999999 99999999998753 11111 12346
Q ss_pred CCC--CCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecC-
Q 007765 209 GDI--PFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS- 285 (590)
Q Consensus 209 ~~~--~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~- 285 (590)
... +.+|++|..+|++.+ .+.|+|+.+++...........+++++..+.+|||||||+.+|++|||+++...
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~~~~~vGi~s~~~~~ 163 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFISGTQAQGVTSGGSGN 163 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEECCEEEEEEeccCCC
Confidence 543 467999999999865 577999887765422222233567888888899999999988999999998753
Q ss_pred -CCCceeEEeehHHHHHH
Q 007765 286 -GAENIGYIIPVPVIKHF 302 (590)
Q Consensus 286 -~~~~~~~aip~~~i~~~ 302 (590)
...+.+|++|++.+.+-
T Consensus 164 ~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 164 CRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp TTTEEEEEEEESHHHHHH
T ss_pred CCCCCceEEEEHHHHHHH
Confidence 33467999998876654
No 31
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.67 E-value=2.6e-16 Score=150.80 Aligned_cols=147 Identities=14% Similarity=0.241 Sum_probs=114.7
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE---
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH--- 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~--- 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++. +|.++ ..++....+|+++.|+|.|+|+..
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEA----------NQLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHH----------HHHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 367999999999999987 9999999999999999 45544 356655556899999999998532
Q ss_pred ---EEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEE
Q 007765 413 ---EFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQV 489 (590)
Q Consensus 413 ---~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V 489 (590)
...+.+... ....+||.+...+.. ....+++|..|
T Consensus 105 ~~~~~~v~l~~~--------------~~~~lG~~~~~~~~~----------------------------~~~~gv~V~~V 142 (196)
T 1p1d_A 105 SSGTFHVKLPKK--------------HSVELGITISSPSSR----------------------------KPGDPLVISDI 142 (196)
T ss_dssp CSSCEEEEECCC--------------SSCCCCCEEECSCSS----------------------------STTCCCEEEEC
T ss_pred CCCcEEEEecCC--------------CCCCcCEEEECCCCC----------------------------CCCCCEEEEEE
Confidence 122333210 011347777654321 01356799999
Q ss_pred eecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 490 LMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 490 ~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.++++|+.+| +++||+|++|||+++.+ +++|.++++++ ++.+.|++.|+
T Consensus 143 ~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 194 (196)
T 1p1d_A 143 KKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKD 194 (196)
T ss_dssp CSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECC
T ss_pred CCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeC
Confidence 9999999999 99999999999999999 99999999988 88999998875
No 32
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.67 E-value=8e-16 Score=146.12 Aligned_cols=147 Identities=18% Similarity=0.243 Sum_probs=107.5
Q ss_pred EEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccCcce-----eEEcCCC--CC
Q 007765 143 SGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGMH-----FLELGDI--PF 213 (590)
Q Consensus 143 sGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~-~~~~~~-----~~~l~~~--~~ 213 (590)
+||++++ +||||+||+++.+.+.+ . + ++++..| +..|+||||++.+. +...+. ++++... ..
T Consensus 19 ~Gf~~~~-~ilTa~Hc~~~~~~v~~--~-d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~~ 89 (189)
T 2ea3_A 19 IGFAVNG-GFITAGHCGRTGATTAN--P-T-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAAP 89 (189)
T ss_dssp CCEEETT-EEEECGGGCCTTCEEET--T-T-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCCC
T ss_pred cCEEccC-eEEEchhcCCCCCEEEe--C-C-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcCCC
Confidence 5888865 99999999998876542 2 3 7888888 89999999998753 111222 4456643 36
Q ss_pred CCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecC--CCCcee
Q 007765 214 LQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS--GAENIG 291 (590)
Q Consensus 214 ~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~--~~~~~~ 291 (590)
+|+.|..+|++.+ .+.|+|+.+++...........+++++..+.+|||||||+.+|++|||+++... ...+.+
T Consensus 90 vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~~~~~vGi~s~~~~~c~~~~~~ 164 (189)
T 2ea3_A 90 VGSAVCRSGSTTG-----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLAGNQAQGVTSGGSGNCRTGGTT 164 (189)
T ss_dssp TTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CCCEEEEEEeCCc-----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEECCEEEEEEeecCCCCCCCCcE
Confidence 7999999998854 567888877664322112223467888888899999999988999999998653 234689
Q ss_pred EEeehHHHHHHH
Q 007765 292 YIIPVPVIKHFI 303 (590)
Q Consensus 292 ~aip~~~i~~~l 303 (590)
|++|++.+++.+
T Consensus 165 ~~~pi~~~l~~~ 176 (189)
T 2ea3_A 165 FFQPVNPILQAY 176 (189)
T ss_dssp EEEEHHHHHHHH
T ss_pred EEEEHHHHHHHC
Confidence 999987765543
No 33
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.67 E-value=9.2e-16 Score=147.41 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=114.2
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE------
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE------ 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~------ 411 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+|.+.. +..++. ..|+++.|+|.|+++.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~~~~~g~ 101 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDE--------IISLLK--NVGERVVLEVEYELPPVSIQGS 101 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHH--------HHHHHH--TCCSEEEEEEEEECCCCCCCCS
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEeccCCCcccCCC
Confidence 467999999999999987 9999999999999999994321 123332 4588999999997642
Q ss_pred ----EEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEE
Q 007765 412 ----HEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILS 487 (590)
Q Consensus 412 ----~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~ 487 (590)
.++++++.... . .+||.+.....+ ..+...+++|.
T Consensus 102 ~~~~~~~~v~l~~~~------------~---~lG~~l~~g~~~--------------------------~~~~~~g~~V~ 140 (200)
T 2qt5_A 102 SVMFRTVEVTLHKEG------------N---TFGFVIRGGAHD--------------------------DRNKSRPVVIT 140 (200)
T ss_dssp SEEEEEEEEEEECBT------------T---BCSEEEEEECCS--------------------------STTTCEEEEEE
T ss_pred ccceeEEEEEEecCC------------C---CeEEEEECCCCC--------------------------CccCCCCEEEE
Confidence 55556654211 1 247765542210 01124688999
Q ss_pred EEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 488 QVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 488 ~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.|.++++|+.++ +++||+|++|||++|. +++++.+++++ +++.+.|++.|+
T Consensus 141 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 194 (200)
T 2qt5_A 141 CVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEYD 194 (200)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEEEE
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 999999999999 9999999999999999 99999999998 888999998875
No 34
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.63 E-value=2.2e-15 Score=142.64 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=107.4
Q ss_pred EEEEEeC---CeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccCcce-----eEEcCCC-
Q 007765 143 SGFVIPG---KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGMH-----FLELGDI- 211 (590)
Q Consensus 143 sGfiI~~---g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~-~~~~~~-----~~~l~~~- 211 (590)
+||++.+ ++||||+||+++.+.+.+ +.++++..| +..|+||||++.+. ....+. ++++...
T Consensus 18 ~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~~ 89 (186)
T 2pfe_A 18 IGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGSQ 89 (186)
T ss_dssp CCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCBCC
T ss_pred eeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCCCC
Confidence 4999973 599999999998877664 467778887 89999999998752 111121 3345433
Q ss_pred -CCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecC--CCC
Q 007765 212 -PFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS--GAE 288 (590)
Q Consensus 212 -~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~--~~~ 288 (590)
+.+|++|..+|++.+ .+.|+|+.+++........+..+++++....+|||||||+.+|+++||+++... ...
T Consensus 90 ~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~~~~~vGi~s~g~~~c~~~ 164 (186)
T 2pfe_A 90 EAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLTGSQAQGVTSGGTGDCRSG 164 (186)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEETTTE
T ss_pred CCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEECCEEEEEEeecCCCCCCC
Confidence 467999999998755 567888887765322222233567777777899999999988999999998753 234
Q ss_pred ceeEEeehHHHHHHH
Q 007765 289 NIGYIIPVPVIKHFI 303 (590)
Q Consensus 289 ~~~~aip~~~i~~~l 303 (590)
+.+|++|++.+.+-+
T Consensus 165 ~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 165 GITFFQPINPLLSYF 179 (186)
T ss_dssp EEEEEEEHHHHHHHH
T ss_pred CcEEEEEHHHHHHHC
Confidence 579999987765543
No 35
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.61 E-value=7e-15 Score=136.98 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=100.4
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCc-ccccccccchHHHHh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT-VAFRNRERITFDHLV 392 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~-v~~~~~~~~~~~~~~ 392 (590)
++|||+.++.. ..|++|..|.++|||+++ |++||+|++|||+++.+|.+ +. ..+
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~ 70 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKA----------HKV 70 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 67899998875 278999999999999999 99999999999999999976 32 233
Q ss_pred hccCCCCEEEEEEEeCCEEEEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHH
Q 007765 393 SMKKPNEKSLVRVLRDGKEHEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERAL 472 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~ 472 (590)
.....|+++.++|.|+++..+++++... ...+||.+.
T Consensus 71 ~~~~~~~~v~l~vr~~~~~~~v~l~~~~----------------~~~lG~~~~--------------------------- 107 (166)
T 1w9e_A 71 LKQAFGEKITMTIRDRPFERTITMHKDS----------------TGHVGFIFK--------------------------- 107 (166)
T ss_dssp HHHCCSSEEEEEEECCTTCEEEEEECCT----------------TSCCSEEEE---------------------------
T ss_pred HhcCCCCEEEEEEEcCCCcEEEEEecCC----------------CCcEeEEEe---------------------------
Confidence 3445788999999444477776665311 012366543
Q ss_pred hcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHH
Q 007765 473 RELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKH 519 (590)
Q Consensus 473 ~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~ 519 (590)
.+ ++..|.++++|+.+++++||+|++|||+++.+|.+
T Consensus 108 ---------~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~ 144 (166)
T 1w9e_A 108 ---------NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKD 144 (166)
T ss_dssp ---------TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCH
T ss_pred ---------CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCCh
Confidence 01 67889999999999999999999999999999864
No 36
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.61 E-value=3e-15 Score=141.51 Aligned_cols=150 Identities=19% Similarity=0.223 Sum_probs=100.8
Q ss_pred ceEE-EEEEe---CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCc-ccCcceeE-----EcC
Q 007765 140 TTGS-GFVIP---GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDE-FWEGMHFL-----ELG 209 (590)
Q Consensus 140 ~~Gs-GfiI~---~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~~~-----~l~ 209 (590)
..|| ||+|. ++|||||+||+.+...+.+-.. + ....+..||||||++.+. +...+.++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 4677 99998 4699999999987665433221 1 123467899999998752 22234443 232
Q ss_pred --CCCCCCCeEEEEecCCCCCCceEEEeEEecccccccc-cCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecC-
Q 007765 210 --DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYV-HGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS- 285 (590)
Q Consensus 210 --~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~-~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~- 285 (590)
..+..|+.|.++|++.+ .+.|.++.+++.... .+......++++...++|||||||+.++++|||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~~~vGI~s~g~~~ 157 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGSTALGLTSGGSGN 157 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECCEEEEEEEeeCCC
Confidence 33467999999998743 355666655433211 111123456778778899999999966699999998753
Q ss_pred -CCCceeEEeehHHHHHHH
Q 007765 286 -GAENIGYIIPVPVIKHFI 303 (590)
Q Consensus 286 -~~~~~~~aip~~~i~~~l 303 (590)
...+.+++.|++.+++++
T Consensus 158 ~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 158 CRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp TTTEEEEEEEEHHHHHHHH
T ss_pred CcCCCceEEEEHHHHHHhc
Confidence 223579999998877665
No 37
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.61 E-value=5.1e-15 Score=142.74 Aligned_cols=142 Identities=19% Similarity=0.254 Sum_probs=104.7
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCE-EEEEEEeCCEEE--EEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEK-SLVRVLRDGKEH--EFS 415 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~-v~l~V~R~g~~~--~~~ 415 (590)
.|++|..|.++|||+++ |++||+|++|||+++.+|..-.. .+..++ ...++. +.|+|.|+++.. .++
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~------~~~~~~--~~~~~~~v~l~v~R~~~~~~~~~~ 116 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTL------KVHQLF--HTTYEKAVTLTVFRADPPELEKFN 116 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHH------HHHHHH--HSCCSSEEEEEEECCSSCCEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHH------HHHHHH--HhcCCCceEEEEEecccCCCcEEE
Confidence 58999999999999987 99999999999999999432110 111222 234555 999999987654 444
Q ss_pred EEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeecccc
Q 007765 416 ITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDIN 495 (590)
Q Consensus 416 v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a 495 (590)
+.+..... ..+||.+.+ ...+++|..|.++++|
T Consensus 117 v~l~~~~~--------------~~lG~~~~~---------------------------------~~~gv~V~~V~~gs~A 149 (206)
T 3r0h_A 117 VDLMKKAG--------------KELGLSLSP---------------------------------NEIGCTIADLIQGQYP 149 (206)
T ss_dssp EEEECCTT--------------CCCCEEEEE---------------------------------CSSCEEEEEECTTSCH
T ss_pred EEEecCCC--------------CccCeEEEc---------------------------------CCceEEEEEECCCChH
Confidence 44432210 124776552 2356899999999999
Q ss_pred cccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCC
Q 007765 496 AGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 496 ~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r 538 (590)
+.+| +++||+|++|||++|.+| .++.+++++ .++.+.|.+.|
T Consensus 150 ~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R 194 (206)
T 3r0h_A 150 EIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTR 194 (206)
T ss_dssp HHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEe
Confidence 9998 999999999999999965 788888876 45677777766
No 38
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.57 E-value=2.2e-15 Score=137.74 Aligned_cols=125 Identities=19% Similarity=0.201 Sum_probs=94.4
Q ss_pred hCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeE
Q 007765 112 ALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLA 190 (590)
Q Consensus 112 ~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlA 190 (590)
++..||.|.. ...+.||||+|+ ++++|||+||+.++....|++ ++..++ +.+++..|+|
T Consensus 2 ~~~n~~~v~g---------------~~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA 61 (198)
T 1mbm_A 2 ARGNVGFVAG---------------SSYGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFA 61 (198)
T ss_dssp CCTTEEEEES---------------SSEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEE
T ss_pred cccceEEEec---------------ccCCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEE
Confidence 3456777764 245889999999 789999999999999999998 788888 6778999999
Q ss_pred EEEe---cCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCC
Q 007765 191 ILIV---ESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (590)
Q Consensus 191 lLkv---~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 267 (590)
++++ +.+ ..+++++|++ +.+|+.- +..+.|.+..+.-. ..+++++ .+||||
T Consensus 62 ~l~v~~~~~~---g~~P~l~las-p~vG~a~-----------~~~~tG~~~~l~g~--------~g~l~~t---~PGDSG 115 (198)
T 1mbm_A 62 EAVTTQSELP---GNWPQLHFAQ-PTTGPAS-----------WCTATGDEEGLLSG--------EVCLAWT---TSGDSG 115 (198)
T ss_dssp EEEECTTTSC---SCCCBCCBCC-CCSEEEE-----------EEETTEEEEEEECS--------SCEECCC---CGGGTT
T ss_pred EEEeeccCCC---CCCcccccCC-CcccceE-----------EeeccccEEEEecC--------CceeEcC---CCCCCC
Confidence 9999 444 3678888866 6777622 23455666554411 1245555 799999
Q ss_pred ceEEeCCEEEEEEee
Q 007765 268 GPAIMGNKVAGVAFQ 282 (590)
Q Consensus 268 GPl~~~G~vVGI~~~ 282 (590)
||++..++||||+++
T Consensus 116 sPVl~~~~vIGV~T~ 130 (198)
T 1mbm_A 116 SAVVQGDAVVGVHTG 130 (198)
T ss_dssp CEEEETTEEEEEEEE
T ss_pred CccccCCeEEEEEec
Confidence 999944499999998
No 39
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.51 E-value=9e-13 Score=129.56 Aligned_cols=177 Identities=16% Similarity=0.181 Sum_probs=110.6
Q ss_pred CCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC----------------
Q 007765 130 LPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH---------------- 185 (590)
Q Consensus 130 ~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~---------------- 185 (590)
.||+-.......|+|.+|++.||||||||+. ..+.|.+.. ..+.+..+-+..++
T Consensus 12 ~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~ 89 (235)
T 1ton_A 12 QPWQVAVINEYLCGGVLIDPSWVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVH 89 (235)
T ss_dssp CTTEEEEESSSEEEEEEEETTEEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCC
T ss_pred cCcEEEEccCCeEEEEEecCCEEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccC
Confidence 3554332212679999999999999999996 344555421 12333344333333
Q ss_pred --CCCeEEEEecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCC-----C---ceEEEeEEecccccccccCcceee
Q 007765 186 --ECDLAILIVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGD-----N---ISVTKGVVSRVEPTQYVHGATQLM 253 (590)
Q Consensus 186 --~~DlAlLkv~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~-----~---~~v~~G~Vs~~~~~~~~~~~~~~~ 253 (590)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||..... . ..+..-+++.-.+...........
T Consensus 90 ~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 169 (235)
T 1ton_A 90 DHSNDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDV 169 (235)
T ss_dssp CSTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGG
T ss_pred CCcCCEEEEEcCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCC
Confidence 359999999987 566678899887654 5689999999965321 0 112223333322222111111112
Q ss_pred EEEEc-----ccccCCCCCceEEeCCEEEEEEeeecC-CC--CceeEEeehHHHHHHHHHHHH
Q 007765 254 AIQID-----AAINPGNSGGPAIMGNKVAGVAFQNLS-GA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 254 ~i~~~-----~~i~~G~SGGPl~~~G~vVGI~~~~~~-~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
.++.. ...|.|||||||+.+|.++||++++.. .. ...+....+...++++++..+
T Consensus 170 ~~Ca~~~~~~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 170 MLCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp EEEEECTTCSCBCCTTCTTCEEEETTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred eEeeccCCCCCcCCCCCCccccEECCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 34432 357899999999988999999998733 11 235677777777888877553
No 40
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.50 E-value=7.4e-13 Score=129.63 Aligned_cols=169 Identities=17% Similarity=0.164 Sum_probs=109.3
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~--------~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.....+.|++... .+.+..+.+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (228)
T 1fxy_A 24 EGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMN 103 (228)
T ss_dssp CEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred CeeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCCc
Confidence 3579999999999999999997666667766311 1234444444444 469999999987 56667
Q ss_pred ceeEEcCCCC-CCCCeEEEEecCCCCCC-----ceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCc
Q 007765 203 MHFLELGDIP-FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGG 268 (590)
Q Consensus 203 ~~~~~l~~~~-~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGG 268 (590)
+.|+.|.... ..|+.+++.||...... .......+.-+. +............++.. ...|.|||||
T Consensus 104 v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (228)
T 1fxy_A 104 VAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGG 183 (228)
T ss_dssp BCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTC
T ss_pred eeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcccc
Confidence 8898887654 56899999998643211 112222222221 11111111111234432 3578999999
Q ss_pred eEEeCCEEEEEEeeecCC--CCceeEEeehHHHHHHHHHHH
Q 007765 269 PAIMGNKVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 269 Pl~~~G~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
||+.+|.++||++++... ....+....+....+++++..
T Consensus 184 PL~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (228)
T 1fxy_A 184 PVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224 (228)
T ss_dssp EEEETTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred ceEECCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHH
Confidence 999888999999987542 223566777777777777654
No 41
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.50 E-value=7.1e-13 Score=129.26 Aligned_cols=166 Identities=14% Similarity=0.123 Sum_probs=107.2
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
..|+|.+|++.+|||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 100 (222)
T 1hj8_A 23 HFCGGSLVNENWVVSAAHCYKSR--VEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYV 100 (222)
T ss_dssp EEEEEEEEETTEEEECGGGCCSS--CEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSC
T ss_pred cEEEeEEecCCEEEECHHhcCCC--eEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCce
Confidence 57999999999999999999743 4454421 23345555455554 469999999987 456678
Q ss_pred eeEEcCCCC-CCCCeEEEEecCCCCC----CceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCceE
Q 007765 204 HFLELGDIP-FLQQAVAVVGYPQGGD----NISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGGPA 270 (590)
Q Consensus 204 ~~~~l~~~~-~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGGPl 270 (590)
.|+.|.... ..|+.+++.||..... ........+.-+. +............++.. ...|.|||||||
T Consensus 101 ~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 180 (222)
T 1hj8_A 101 QPVALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPV 180 (222)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEE
T ss_pred eccCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCcccce
Confidence 899887654 5689999999965321 1122222222221 11111111111234442 356899999999
Q ss_pred EeCCEEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 271 IMGNKVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 271 ~~~G~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
+.+|+++||++++.... ...+....+...++++++..
T Consensus 181 ~~~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~ 219 (222)
T 1hj8_A 181 VCNGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219 (222)
T ss_dssp EETTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred EECCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHh
Confidence 98899999999876422 34567777777777777654
No 42
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.49 E-value=7e-13 Score=130.53 Aligned_cols=170 Identities=16% Similarity=0.222 Sum_probs=108.3
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEc------CCCcEEEEEEEEecC------------------CCCeEEEEe
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH------------------ECDLAILIV 194 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~------~~~~~~~a~vv~~d~------------------~~DlAlLkv 194 (590)
...|+|.+|++.||||||||+.+...+.+-.. ..++.+..+-+..++ .+||||||+
T Consensus 23 ~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L 102 (237)
T 2zch_P 23 RAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRL 102 (237)
T ss_dssp SEEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEEE
T ss_pred CeEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEEe
Confidence 46799999999999999999987554333211 123445555444443 569999999
Q ss_pred cCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCCC-----ce---EEEeEEecccccccccCcceeeEEEEc-----c
Q 007765 195 ESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN-----IS---VTKGVVSRVEPTQYVHGATQLMAIQID-----A 259 (590)
Q Consensus 195 ~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~-----~~---v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~ 259 (590)
+.+ .+.+.+.|+.|.... ..|+.+++.||...... .. +..-+++.-.+............++.. .
T Consensus 103 ~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 182 (237)
T 2zch_P 103 SEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTGGK 182 (237)
T ss_dssp SSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTCSC
T ss_pred CCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCCCC
Confidence 987 566678898887654 56899999998653211 11 122233322221111111111234432 3
Q ss_pred cccCCCCCceEEeCCEEEEEEeeecC-C--CCceeEEeehHHHHHHHHHHHH
Q 007765 260 AINPGNSGGPAIMGNKVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 260 ~i~~G~SGGPl~~~G~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l~~ 308 (590)
..|.|||||||+.++.++||++++.. . ....+....+...++++++..+
T Consensus 183 ~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 183 STCSGDSGGPLVCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp BCCTTCTTCEEESSSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cccCCCccCeEEECCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 57899999999977899999998763 1 1345677777877888876553
No 43
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.48 E-value=6.1e-12 Score=122.71 Aligned_cols=167 Identities=15% Similarity=0.188 Sum_probs=108.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~~-------~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.+|||+|||+.. .+.|.+.. ..+.+...-+..++. +||||||++.+ .+...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (226)
T 4ag1_A 27 SKFCGGFLIRRNFVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLA 104 (226)
T ss_dssp CEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred ccEEEEEEEeCCEEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCc
Confidence 46799999999999999999954 56666531 113455555555554 69999999986 45567
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC----C---ceEEEeEEecccccccccCcceeeEEEEc-----ccccCCCCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD----N---ISVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSG 267 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~----~---~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SG 267 (590)
+.|+.|.... ..|+.+.+.||..... . ..+..-+++...+..+.. ......++.. ...|.||||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 105 VGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD-FDHNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTT-CCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccC-cCccceEeeccCCCCCcCccCCCC
Confidence 7888886543 4589999999864321 1 122223333322221111 1111234432 356899999
Q ss_pred ceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHHH
Q 007765 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 268 GPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (590)
|||+.++.++||++++.......+....+...++++++..+
T Consensus 184 gPl~~~~~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEETTEEEEEEEECBTTCCSCEEEEEHHHHHHHHHHHHH
T ss_pred CceEEcCEEEEEEEECCCCCCCCCEEEEhHHHHHHHHHHHh
Confidence 99998899999999987644446777778887888877553
No 44
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.48 E-value=1.4e-12 Score=127.02 Aligned_cols=167 Identities=14% Similarity=0.119 Sum_probs=107.8
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
..|+|.+|++.+|||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||++.+ .+...+
T Consensus 23 ~~C~GtLI~~~~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v 100 (223)
T 4i8h_A 23 HFCGGSLINSQWVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRV 100 (223)
T ss_dssp EEEEEEECSSSEEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred cEEEEEEEcCCEEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCce
Confidence 56999999999999999999864 3444321 22344555555555 469999999987 466678
Q ss_pred eeEEcCCCC-CCCCeEEEEecCCCCCC-----ceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCce
Q 007765 204 HFLELGDIP-FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGGP 269 (590)
Q Consensus 204 ~~~~l~~~~-~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGGP 269 (590)
.|+.|.... ..|+.+++.||...... .......+.-+. +............++.. ...|.||||||
T Consensus 101 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 180 (223)
T 4i8h_A 101 ASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGP 180 (223)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCE
T ss_pred eceECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCc
Confidence 899887654 56999999998643211 112222222211 11111111111234432 35689999999
Q ss_pred EEeCCEEEEEEeeecCC--CCceeEEeehHHHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 308 (590)
|+.+++++||++++... ....+....+...++++++..+
T Consensus 181 l~~~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 181 VVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp EEETTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred EEECCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 99888999999987652 2235677777777777776543
No 45
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.48 E-value=9.9e-13 Score=128.36 Aligned_cols=167 Identities=15% Similarity=0.139 Sum_probs=106.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 26 ~~~CgGsLI~~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (224)
T 1cgh_A 26 QSRCGGFLVREDFVLTAAHCWGSN--INVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRN 103 (224)
T ss_dssp SCEEEEEEEETTEEEECGGGCCSS--EEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTT
T ss_pred CeEEEEEEeeCCEEEEhHHhCCCC--CEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCc
Confidence 367999999999999999999863 5555421 13445555555554 359999999987 45667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC---CceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCc
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD---NISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGG 268 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~---~~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGG 268 (590)
+.|+.|.... ..|+.+++.||..... ........+.-+. +............++.. ...|.|||||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (224)
T 1cgh_A 104 VNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGG 183 (224)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTC
T ss_pred eEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCcc
Confidence 8899887543 3589999999864321 1122222222221 11110000001134432 3568999999
Q ss_pred eEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 269 PAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 269 Pl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
||+.+|.++||++++.......+....+....+++++..
T Consensus 184 PL~~~~~l~Gi~S~g~~~~~~p~vyt~V~~~~~WI~~~~ 222 (224)
T 1cgh_A 184 PLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTM 222 (224)
T ss_dssp EEEETTEEEEEEEECCTTCCSCEEEEEGGGGHHHHHHHH
T ss_pred ceEEccEEEEEEEEECCCCCCCeEEEEHHHhHHHHHHHh
Confidence 999888999999987633334566677777777776644
No 46
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.47 E-value=1.5e-12 Score=126.99 Aligned_cols=166 Identities=14% Similarity=0.112 Sum_probs=107.2
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
..|+|.+|++.||||+|||+. ..+.|.+.. +.+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 100 (223)
T 3mfj_A 23 HFCGGSLINSQWVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRV 100 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEecCCEEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCcE
Confidence 579999999999999999995 345555521 13345554454554 469999999987 566678
Q ss_pred eeEEcCCCC-CCCCeEEEEecCCCCC-----CceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCce
Q 007765 204 HFLELGDIP-FLQQAVAVVGYPQGGD-----NISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGGP 269 (590)
Q Consensus 204 ~~~~l~~~~-~~G~~V~~iG~p~g~~-----~~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGGP 269 (590)
.|+.|.... ..|+.+++.||..... ...+....+.-+. +............++.. ...|.||||||
T Consensus 101 ~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 180 (223)
T 3mfj_A 101 ASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGP 180 (223)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCE
T ss_pred eeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcccc
Confidence 899997654 5689999999965421 0112222222221 11111111111234442 35689999999
Q ss_pred EEeCCEEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
|+.+|+++||++++.... ...+....+...++++++..
T Consensus 181 L~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 3mfj_A 181 VVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp EEETTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred eEECCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 998899999999875422 23566777777777777654
No 47
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.47 E-value=1.3e-12 Score=128.62 Aligned_cols=167 Identities=13% Similarity=0.071 Sum_probs=105.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEE
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAIL 192 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~------------------~~DlAlL 192 (590)
...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++ .+|||||
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1ao5_A 23 EHICGGVLLDRNWVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLL 100 (237)
T ss_dssp EEEEEEEEEETTEEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEE
T ss_pred CeEEEEEEeeCCEEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEE
Confidence 36799999999999999999963 44555421 12233333333333 6799999
Q ss_pred EecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCCC--------ceEEEeEEecccccccccCcceeeEEEEc----
Q 007765 193 IVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQID---- 258 (590)
Q Consensus 193 kv~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~---- 258 (590)
|++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+..-+++.-.+............++..
T Consensus 101 ~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 180 (237)
T 1ao5_A 101 RLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGG 180 (237)
T ss_dssp EESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTC
T ss_pred EeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCCC
Confidence 99987 466678899887654 56899999998643210 11222233322221111111111234432
Q ss_pred -ccccCCCCCceEEeCCEEEEEEeee-cCCC--CceeEEeehHHHHHHHHHHH
Q 007765 259 -AAINPGNSGGPAIMGNKVAGVAFQN-LSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 -~~i~~G~SGGPl~~~G~vVGI~~~~-~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+.+|.++||++++ .... ...+....+....+++++..
T Consensus 181 ~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1ao5_A 181 GKDTCRDDSGGPLICDGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233 (237)
T ss_dssp SCBCCTTCTTCEEEETTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHH
T ss_pred CCCCCCCCCcceEEECCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 3578999999999889999999987 3321 23566777777777777654
No 48
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.47 E-value=1.3e-12 Score=127.45 Aligned_cols=167 Identities=15% Similarity=0.120 Sum_probs=106.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC---------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccC
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG---------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWE 201 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~---------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~ 201 (590)
...|+|.+|++.||||+|||+.+. +.|.+.. +.+.+..+.+..++ .+||||||++.+ .+.+
T Consensus 23 ~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 100 (223)
T 2bdg_A 23 ELFCSGVLVHPQWVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESD 100 (223)
T ss_dssp CEEEEEEEEETTEEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCCS
T ss_pred CEEEEEEEecCCEEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCCC
Confidence 467999999999999999999764 3444321 12345555455554 469999999987 5566
Q ss_pred cceeEEcCCCC-CCCCeEEEEecCCCCCC---ceEEEeEEeccc---ccccccCcceeeEEEEc-----ccccCCCCCce
Q 007765 202 GMHFLELGDIP-FLQQAVAVVGYPQGGDN---ISVTKGVVSRVE---PTQYVHGATQLMAIQID-----AAINPGNSGGP 269 (590)
Q Consensus 202 ~~~~~~l~~~~-~~G~~V~~iG~p~g~~~---~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~-----~~i~~G~SGGP 269 (590)
.+.|+.|.... ..|+.+++.||...... .......+.-+. +............++.. ...|.||||||
T Consensus 101 ~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 180 (223)
T 2bdg_A 101 TIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGP 180 (223)
T ss_dssp SCCCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCE
T ss_pred ceecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCch
Confidence 78888887654 56899999999653221 112222222221 11111111111234442 35689999999
Q ss_pred EEeCCEEEEEEeeecC-C--CCceeEEeehHHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
|+.+|.++||++++.. . ....+....+....+++++..
T Consensus 181 L~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 181 LICNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp EEETTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred heEccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 9988899999998753 1 123566777777777776543
No 49
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.47 E-value=4.7e-12 Score=123.78 Aligned_cols=166 Identities=16% Similarity=0.164 Sum_probs=106.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
..|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 104 (227)
T 1iau_A 27 KRCGGFLIRDDFVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAV 104 (227)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEEcCCEEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCce
Confidence 5799999999999999999975 45666531 12345555555554 469999999987 456678
Q ss_pred eeEEcCCCC---CCCCeEEEEecCCCCC----CceEEEeEEeccc---ccccccCc-ceeeEEEEc-----ccccCCCCC
Q 007765 204 HFLELGDIP---FLQQAVAVVGYPQGGD----NISVTKGVVSRVE---PTQYVHGA-TQLMAIQID-----AAINPGNSG 267 (590)
Q Consensus 204 ~~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~---~~~~~~~~-~~~~~i~~~-----~~i~~G~SG 267 (590)
.|+.|.... ..|+.+++.||..... ...+....+.-+. +....... .....++.. ...|.||||
T Consensus 105 ~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 184 (227)
T 1iau_A 105 QPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSG 184 (227)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred ecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCCC
Confidence 898887644 3589999999864321 1122222222221 11111110 001134442 356899999
Q ss_pred ceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 268 GPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
|||+.+|.++||++++.......+....+....+++++..
T Consensus 185 gPL~~~~~l~Gi~S~gc~~~~~p~vyt~v~~~~~WI~~~~ 224 (227)
T 1iau_A 185 GPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTM 224 (227)
T ss_dssp SEEEETTEEEEEEEEECTTSCSCEEEEEGGGGHHHHHHHH
T ss_pred chheEeeEEEEEEeEecCCCCCCeEEEEHHHHHHHHHHHH
Confidence 9999888999999987433334566777777777777654
No 50
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.47 E-value=1.7e-12 Score=126.84 Aligned_cols=166 Identities=14% Similarity=0.162 Sum_probs=104.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC----------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH----------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~----------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.+|||+|||+.. .+.|.+.. .++.+..+-+..++ .+||||||++.+ .+
T Consensus 23 ~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~ 100 (225)
T 1npm_A 23 RLICGGVLVGDRWVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANL 100 (225)
T ss_dssp EEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCC
T ss_pred ceEEEEEEECCCEEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccC
Confidence 35799999999999999999974 34555421 13344444444443 259999999987 46
Q ss_pred cCcceeEEcCCCC-CCCCeEEEEecCCCC----C-CceEEEeEEeccc---ccccccCcceeeEEEE----cccccCCCC
Q 007765 200 WEGMHFLELGDIP-FLQQAVAVVGYPQGG----D-NISVTKGVVSRVE---PTQYVHGATQLMAIQI----DAAINPGNS 266 (590)
Q Consensus 200 ~~~~~~~~l~~~~-~~G~~V~~iG~p~g~----~-~~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~----~~~i~~G~S 266 (590)
.+.+.|+.|.+.. ..|+.++++||.... . ........+.-+. +............++. ....|.|||
T Consensus 101 ~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 180 (225)
T 1npm_A 101 GDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDS 180 (225)
T ss_dssp SSSSCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTCT
T ss_pred CCceeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCCCC
Confidence 6678999998654 569999999986431 1 0122222222211 1111111111123443 245789999
Q ss_pred CceEEeCCEEEEEEeeecC-C--CCceeEEeehHHHHHHHHHH
Q 007765 267 GGPAIMGNKVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 267 GGPl~~~G~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l 306 (590)
||||+.+|.++||++++.. . ....+....+...++++++.
T Consensus 181 GgPL~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (225)
T 1npm_A 181 GGPLVCDGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223 (225)
T ss_dssp TCEEEETTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHH
T ss_pred CchheECCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 9999988999999998733 1 12346667677766666653
No 51
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.46 E-value=1.2e-12 Score=127.83 Aligned_cols=167 Identities=21% Similarity=0.237 Sum_probs=107.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEc-----CCCcEEEEEEEEecCC-----CCeEEEEecCC-cccCccee
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKH-----GSPTKYRAQVEAVGHE-----CDLAILIVESD-EFWEGMHF 205 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~-----~~~~~~~a~vv~~d~~-----~DlAlLkv~~~-~~~~~~~~ 205 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+. .+++.+..+-+..++. +||||||++.+ .+.+.+.|
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~p 102 (224)
T 1pq7_A 23 GPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGY 102 (224)
T ss_dssp EEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCC
T ss_pred CeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccc
Confidence 357999999999999999999853 45777763 1244566666666664 59999999987 45567889
Q ss_pred EEcCC--CC-CCCCeEEEEecCCCCCC--------ceEEEeEEecccccc-cccCcceeeEEEEc-----ccccCCCCCc
Q 007765 206 LELGD--IP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQ-YVHGATQLMAIQID-----AAINPGNSGG 268 (590)
Q Consensus 206 ~~l~~--~~-~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~-~~~~~~~~~~i~~~-----~~i~~G~SGG 268 (590)
+.|.. .. ..|+.+++.||...... ..+...+++.-.+.. +.........++.. ...|.|||||
T Consensus 103 icL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 182 (224)
T 1pq7_A 103 ARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182 (224)
T ss_dssp CCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTC
T ss_pred eecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCc
Confidence 88873 32 45899999998643211 112222333222211 11011111234442 3568999999
Q ss_pred eEE-eCCEEEEEEeeecCCC--CceeEEeehHHHHHHHHH
Q 007765 269 PAI-MGNKVAGVAFQNLSGA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 269 Pl~-~~G~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~ 305 (590)
||+ .+|.++||++++.... ...+....+...++++++
T Consensus 183 PL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 183 PIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp EEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred ceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 999 6999999999875422 234666666666666654
No 52
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.46 E-value=3.2e-12 Score=124.78 Aligned_cols=166 Identities=16% Similarity=0.167 Sum_probs=106.0
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcCC-----C----cEEEEEEEEec------CCCCeEEEEecCC-ccc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHGS-----P----TKYRAQVEAVG------HECDLAILIVESD-EFW 200 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~~-----~----~~~~a~vv~~d------~~~DlAlLkv~~~-~~~ 200 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+... . +.+..+-+..+ ..+||||||++.+ .+.
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 102 (225)
T 1a7s_A 23 RHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLT 102 (225)
T ss_dssp EEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCB
T ss_pred CcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccCC
Confidence 357999999999999999999753 4567776311 1 34444433332 3579999999987 455
Q ss_pred CcceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEEeEEecccccccccCcceeeEEEE-----cccccCCCCCc
Q 007765 201 EGMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGG 268 (590)
Q Consensus 201 ~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SGG 268 (590)
+.+.|+.|.... ..|+.+++.||...... .......+.-+....... ..++. ....|.|||||
T Consensus 103 ~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~-----~~~Ca~~~~~~~~~C~GDSGg 177 (225)
T 1a7s_A 103 SSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP-----NNVCTGVLTRRGGICNGDGGT 177 (225)
T ss_dssp TTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT-----TEEEEECSSSSCBCCTTCTTC
T ss_pred CceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc-----CceEEeccCCCCCcccCCCcc
Confidence 678888887543 35899999999653211 112222222111111111 12332 23578999999
Q ss_pred eEEeCCEEEEEEeeec-CCCCceeEEeehHHHHHHHHHHHHc
Q 007765 269 PAIMGNKVAGVAFQNL-SGAENIGYIIPVPVIKHFITGVVEH 309 (590)
Q Consensus 269 Pl~~~G~vVGI~~~~~-~~~~~~~~aip~~~i~~~l~~l~~~ 309 (590)
||+.+|.++||++++. ....+.+....+...++++++..+.
T Consensus 178 Pl~~~g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~ 219 (225)
T 1a7s_A 178 PLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNN 219 (225)
T ss_dssp EEEETTEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHS
T ss_pred hheeCCEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcC
Confidence 9997689999999873 3222267778888888888877653
No 53
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.46 E-value=2.5e-12 Score=125.03 Aligned_cols=162 Identities=17% Similarity=0.175 Sum_probs=103.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCc--EEEEEEcC--------CCcEEEEEEEEec------CCCCeEEEEecCC-cccC
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADST--FVLVRKHG--------SPTKYRAQVEAVG------HECDLAILIVESD-EFWE 201 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~--~i~V~~~~--------~~~~~~a~vv~~d------~~~DlAlLkv~~~-~~~~ 201 (590)
...|+|.+|++.+|||+|||+.+.. .+.|.+.. ..+.+..+-+..+ ..+|||||+++.+ .+.+
T Consensus 26 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~ 105 (221)
T 1fuj_A 26 SHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSA 105 (221)
T ss_dssp CCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCS
T ss_pred CEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCC
Confidence 3579999999999999999998643 57777631 1233444333332 3579999999987 4566
Q ss_pred cceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEEeEEecccccccccCcceeeEEEE-----cccccCCCCCce
Q 007765 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGP 269 (590)
Q Consensus 202 ~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SGGP 269 (590)
.+.|+.|.... ..|+.+++.||...... .......+.-+ ..... .. .++. ....|.||||||
T Consensus 106 ~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~--~~---~~Ca~~~~~~~~~C~GDSGgP 179 (221)
T 1fuj_A 106 SVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCR--PH---NICTFVPRRKAGICFGDSGGP 179 (221)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCC--TT---EEEEECSSSSCBCCTTCTTCE
T ss_pred cceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecC--Cc---eeeeccCCCCCCCCCCCCCCe
Confidence 78898887654 35899999998643211 11122222111 11000 01 2222 235789999999
Q ss_pred EEeCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l 306 (590)
|+.+|.++||+++... .....+....+...++++++.
T Consensus 180 L~~~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~ 219 (221)
T 1fuj_A 180 LICDGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRST 219 (221)
T ss_dssp EEETTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred eEECCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 9988999999998432 222356667777777777654
No 54
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.46 E-value=6.4e-12 Score=122.31 Aligned_cols=165 Identities=18% Similarity=0.226 Sum_probs=107.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~~-------~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.+|||+|||+.. .+.|.+.. ..+.+..+-+..++. +||||||++.+ .+...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (224)
T 3rp2_A 27 RVICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPA 104 (224)
T ss_dssp EEEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTT
T ss_pred EEEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCc
Confidence 45799999999999999999954 45565531 123455555555553 69999999987 45667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCCC-------ceEEEeEEecccccccccCcceeeEEEEc-----ccccCCCCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSG 267 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~~-------~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SG 267 (590)
+.|+.|.... ..|+.+++.||...... ..+...+++...+..+.. ......++.. ...|.||||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsG 183 (224)
T 3rp2_A 105 VNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY-YEYKFQVCVGSPTTLRAAFMGDSG 183 (224)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTC-CCTTTEEEECCTTSCCBCCTTTTT
T ss_pred ccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccc-cCcCCEEEecCCCCCCeeccCCCC
Confidence 8888887543 45899999998532110 122223333322221111 0011223332 356889999
Q ss_pred ceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHH
Q 007765 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 268 GPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l 306 (590)
|||+.++.++||++++.......+....+...++++++.
T Consensus 184 gPl~~~~~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI~~~ 222 (224)
T 3rp2_A 184 GPLLCAGVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAV 222 (224)
T ss_dssp CEEEETTEEEEEEEECCTTCCSCEEEEEHHHHHHHHHHH
T ss_pred CeEEEcceeeEEEEECCCCCCCCcEEEEHHHhHHHHHHH
Confidence 999988999999998765444466777777777777664
No 55
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.45 E-value=3.8e-12 Score=124.46 Aligned_cols=167 Identities=11% Similarity=0.081 Sum_probs=105.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC---------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccC
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG---------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWE 201 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~---------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~ 201 (590)
...|+|.+|++.||||+|||+.+. +.|++.. ..+.+...-+..++ .+||||||++.+ .+.+
T Consensus 24 ~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (227)
T 2psx_A 24 QLYCGAVLVHPQWLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTK 101 (227)
T ss_dssp EEEEEEEEEETTEEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCS
T ss_pred CceEEEEEEcCCEEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCC
Confidence 357999999999999999999754 3444421 12344444444443 469999999987 4566
Q ss_pred cceeEEcCCCC-CCCCeEEEEecCCCCCC-----ceEEEeEEeccc---ccccccCcceeeEEEEc----ccccCCCCCc
Q 007765 202 GMHFLELGDIP-FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVE---PTQYVHGATQLMAIQID----AAINPGNSGG 268 (590)
Q Consensus 202 ~~~~~~l~~~~-~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~---~~~~~~~~~~~~~i~~~----~~i~~G~SGG 268 (590)
.+.|+.|.... ..|+.++++||...... ..+....+.-+. +............++.. ...|.|||||
T Consensus 102 ~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGg 181 (227)
T 2psx_A 102 DVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGG 181 (227)
T ss_dssp SSCCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCTTC
T ss_pred ceeeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCCCc
Confidence 78898887644 55899999999653211 122222222221 11111111111234432 3568999999
Q ss_pred eEEeCCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHH
Q 007765 269 PAIMGNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 269 Pl~~~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
||+.+|.++||++++. .. ....+....+...++++++..
T Consensus 182 PL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 223 (227)
T 2psx_A 182 PVVCNGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223 (227)
T ss_dssp EEEETTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHH
T ss_pred ceeeCCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 9998789999999873 32 133566777777777777654
No 56
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.45 E-value=4.2e-12 Score=124.49 Aligned_cols=171 Identities=12% Similarity=0.093 Sum_probs=108.0
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC-----CCcE--EEEEEEEecC-------CCCeEEEEecCC-cccCcce
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTK--YRAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~-----~~~~--~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (590)
..|+|.+|++.||||+|||+.....+.+-... +... +....+..++ .+||||||++.+ .+...+.
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~ 105 (234)
T 3s9c_A 26 IHCAGALINREWVLTAAHCDRRNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIA 105 (234)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTEEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBTTBC
T ss_pred EEEeeEEeeCCEEEEchhhcCCCceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCCccc
Confidence 46999999999999999999754333332110 1111 1222222233 359999999987 5667888
Q ss_pred eEEcCCCC-CCCCeEEEEecCCCCC-----C-ceEEEeEEeccccccccc-CcceeeEEEE-----cccccCCCCCceEE
Q 007765 205 FLELGDIP-FLQQAVAVVGYPQGGD-----N-ISVTKGVVSRVEPTQYVH-GATQLMAIQI-----DAAINPGNSGGPAI 271 (590)
Q Consensus 205 ~~~l~~~~-~~G~~V~~iG~p~g~~-----~-~~v~~G~Vs~~~~~~~~~-~~~~~~~i~~-----~~~i~~G~SGGPl~ 271 (590)
|+.|.... ..|+.+.+.||..... . ..+...+++...+..... .......++. ....|.|||||||+
T Consensus 106 pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~ 185 (234)
T 3s9c_A 106 PVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLI 185 (234)
T ss_dssp CCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEE
T ss_pred ccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCCCeEE
Confidence 99997655 5699999999964311 0 122333343322221111 1111123443 23568999999999
Q ss_pred eCCEEEEEEeeecC-CC--CceeEEeehHHHHHHHHHHHHcC
Q 007765 272 MGNKVAGVAFQNLS-GA--ENIGYIIPVPVIKHFITGVVEHG 310 (590)
Q Consensus 272 ~~G~vVGI~~~~~~-~~--~~~~~aip~~~i~~~l~~l~~~g 310 (590)
.+++++||++++.. .. ...+....+...++++++..+..
T Consensus 186 ~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 186 CNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred EeCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 88999999998754 21 23577788888888888876544
No 57
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.45 E-value=2.7e-12 Score=125.30 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=106.1
Q ss_pred eEEEEEEeCCeEEEcCcccCCCcEEEEEEcC------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcceeE
Q 007765 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHFL 206 (590)
Q Consensus 141 ~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~~~~ 206 (590)
.|+|.+|++.+|||+|||+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+.|+
T Consensus 25 ~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi 102 (224)
T 2qxi_A 25 HCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKV 102 (224)
T ss_dssp EEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCCC
T ss_pred EEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceeeE
Confidence 79999999999999999995 456666531 12344544444444 369999999987 466678899
Q ss_pred EcCCCC-CCCCeEEEEecCCCCC------C-c-eEEEeEEecccccccccCcceeeEEEEc-----ccccCCCCCceEEe
Q 007765 207 ELGDIP-FLQQAVAVVGYPQGGD------N-I-SVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSGGPAIM 272 (590)
Q Consensus 207 ~l~~~~-~~G~~V~~iG~p~g~~------~-~-~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SGGPl~~ 272 (590)
.|.... ..|+.++++||..... . + .+..-+++...+............++.. ...|.|||||||+.
T Consensus 103 cL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~ 182 (224)
T 2qxi_A 103 RLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVC 182 (224)
T ss_dssp CCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEEEE
T ss_pred ECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccEEE
Confidence 887654 5689999999965321 0 1 1222233322221111000111234432 35789999999998
Q ss_pred CCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHH
Q 007765 273 GNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 273 ~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
+|.++||++++. .. ....+....+...++++++..
T Consensus 183 ~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 220 (224)
T 2qxi_A 183 RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220 (224)
T ss_dssp TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 899999999873 31 123566677777777777654
No 58
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.44 E-value=3.9e-12 Score=124.05 Aligned_cols=167 Identities=19% Similarity=0.181 Sum_probs=106.7
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+... +.|.+.. .++.+..+-+..++ .+|||||+++.+ .+.+.
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~ 100 (223)
T 1lo6_A 23 HLLCGGVLIHPLWVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSEL 100 (223)
T ss_dssp EEEEEEEEEETTEEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred CEEEEeEEecCCEEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCc
Confidence 367999999999999999999743 4454421 13344554444444 469999999987 45667
Q ss_pred ceeEEcCCCC-CCCCeEEEEecCCCCC---CceE---EEeEEecccccccccCcceeeEEEEc-----ccccCCCCCceE
Q 007765 203 MHFLELGDIP-FLQQAVAVVGYPQGGD---NISV---TKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSGGPA 270 (590)
Q Consensus 203 ~~~~~l~~~~-~~G~~V~~iG~p~g~~---~~~v---~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SGGPl 270 (590)
+.|+.|.... ..|+.+.++||..... ...+ ..-+++.-.+.....+......++.. ...|.|||||||
T Consensus 101 v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL 180 (223)
T 1lo6_A 101 IQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPL 180 (223)
T ss_dssp BCCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEE
T ss_pred eeecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcE
Confidence 8899887654 5689999999965321 0112 22233322221111111111234432 357899999999
Q ss_pred EeCCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHH
Q 007765 271 IMGNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 271 ~~~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
+.+|.++||++++. .. ....+....+...++++++..
T Consensus 181 ~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 181 VCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp EETTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred EeCCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 98889999999873 31 223566777777777777654
No 59
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.44 E-value=1.2e-12 Score=128.02 Aligned_cols=168 Identities=18% Similarity=0.157 Sum_probs=108.7
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~--------~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+||||||++.+ .+.+.
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~ 102 (226)
T 1azz_A 23 MYFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAA 102 (226)
T ss_dssp TEEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCSS
T ss_pred cEEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCCC
Confidence 3679999999999999999999877788876311 2233443344443 469999999987 55667
Q ss_pred ceeEEcCCCC-CCCCeEEEEecCCCCC-----CceEEEe---EEecccccccccCcceeeEEEEc----ccccCCCCCce
Q 007765 203 MHFLELGDIP-FLQQAVAVVGYPQGGD-----NISVTKG---VVSRVEPTQYVHGATQLMAIQID----AAINPGNSGGP 269 (590)
Q Consensus 203 ~~~~~l~~~~-~~G~~V~~iG~p~g~~-----~~~v~~G---~Vs~~~~~~~~~~~~~~~~i~~~----~~i~~G~SGGP 269 (590)
+.|+.|.... ..|+.+++.||..... ...+... +++.-.+.... +......++.. ...|.||||||
T Consensus 103 v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~-~~~~~~~~Ca~~~~~~~~C~GDSGgP 181 (226)
T 1azz_A 103 IATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVY-GIVTDGNICIDSTGGKGTCNGDSGGP 181 (226)
T ss_dssp SCCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHH-SCCCTTEEEECCTTTCBCCTTCTTCE
T ss_pred cccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhh-CcCCCceEeecCCCCCccCCCCCCcc
Confidence 8888887644 5689999999864321 0112222 22221111111 01111234432 35689999999
Q ss_pred EEeCCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (590)
|+.+|.++||++++.. .....+....+...++++++..
T Consensus 182 L~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 182 LNYNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp EEETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred eEECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 9988999999998763 1123456677777777777654
No 60
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.44 E-value=4.3e-12 Score=125.94 Aligned_cols=170 Identities=19% Similarity=0.200 Sum_probs=109.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||||||+.+...+.|++.. ....+..+-+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (250)
T 1aut_C 24 KLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQT 103 (250)
T ss_dssp CEEEEEEEEETTEEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred ceEEEEEEeeCCEEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 357999999999999999999887777777631 12344555455554 369999999987 56667
Q ss_pred ceeEEcCCCC-------CCCCeEEEEecCCCCCC-----------c-eEEEeEEecccccccccCcceeeEEEEc-----
Q 007765 203 MHFLELGDIP-------FLQQAVAVVGYPQGGDN-----------I-SVTKGVVSRVEPTQYVHGATQLMAIQID----- 258 (590)
Q Consensus 203 ~~~~~l~~~~-------~~G~~V~~iG~p~g~~~-----------~-~v~~G~Vs~~~~~~~~~~~~~~~~i~~~----- 258 (590)
+.|+.|.... ..|+.+++.||...... + .+..-+++...+............++..
T Consensus 104 v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~~ 183 (250)
T 1aut_C 104 IVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGDR 183 (250)
T ss_dssp BCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTCC
T ss_pred eeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCCC
Confidence 8888887532 45899999998643210 1 1222233322221111111111234442
Q ss_pred ccccCCCCCceEE--eCCE--EEEEEeeecCCC--CceeEEeehHHHHHHHHHHHH
Q 007765 259 AAINPGNSGGPAI--MGNK--VAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 259 ~~i~~G~SGGPl~--~~G~--vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
...|.|||||||+ .+|+ ++||++++.... ...+....+....+++++..+
T Consensus 184 ~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 239 (250)
T 1aut_C 184 QDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239 (250)
T ss_dssp CBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred CCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhh
Confidence 3568999999999 4675 999999876422 345667777777777776553
No 61
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.44 E-value=1.8e-12 Score=127.50 Aligned_cols=166 Identities=14% Similarity=0.117 Sum_probs=103.5
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEEE
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAILI 193 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~------------------~~DlAlLk 193 (590)
..|+|.+|++.||||||||+.. .+.|.+.. .++.+..+-+..++ .+|||||+
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 1gvz_A 24 FQCGGVLVHPQWVLTAAHCMSD--DYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLR 101 (237)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEE
T ss_pred eEEEeEEeeCCEEEEcHHhCCC--CCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEEE
Confidence 5799999999999999999973 34555421 12344454444443 67999999
Q ss_pred ecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCC---CC--ceEEEe---EEecccccccccCcceeeEEEEc-----
Q 007765 194 VESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGG---DN--ISVTKG---VVSRVEPTQYVHGATQLMAIQID----- 258 (590)
Q Consensus 194 v~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~---~~--~~v~~G---~Vs~~~~~~~~~~~~~~~~i~~~----- 258 (590)
++.+ .+.+.+.|+.|.... ..|+.+.+.||.... .. ...... +++.-.+............++..
T Consensus 102 L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 181 (237)
T 1gvz_A 102 LAQPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRDDS 181 (237)
T ss_dssp ESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSSTT
T ss_pred eCCCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCCCC
Confidence 9987 466678899887654 568999999986531 11 111222 22222221111000111233332
Q ss_pred ccccCCCCCceEEeCCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHH
Q 007765 259 AAINPGNSGGPAIMGNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 ~~i~~G~SGGPl~~~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+.+|.++||++++. .. ....+....+....+++++..
T Consensus 182 ~~~C~GDSGgPL~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1gvz_A 182 GSICLGDSGGALICDGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233 (237)
T ss_dssp CEECGGGTTCEEEETTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHH
T ss_pred CccCCCCccCcEeeCCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 24689999999998899999999875 21 122345566666666666543
No 62
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.44 E-value=5.1e-12 Score=123.81 Aligned_cols=172 Identities=16% Similarity=0.157 Sum_probs=107.9
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC------CCcE-EEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTK-YRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~------~~~~-~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
...|+|.+|++.||||+|||+.....+.+-... +... ...+.+..++ .+|||||+++.+ .+.+.+
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v 102 (234)
T 3s69_A 23 GFFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHI 102 (234)
T ss_dssp CEEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTTB
T ss_pred CeEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCcc
Confidence 367999999999999999999765444332210 1111 2223333232 469999999987 466678
Q ss_pred eeEEcCCCC-CCCCeEEEEecCCCCCC--------ceEEEeEEecccccc-cccCcceeeEEEE-----cccccCCCCCc
Q 007765 204 HFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQ-YVHGATQLMAIQI-----DAAINPGNSGG 268 (590)
Q Consensus 204 ~~~~l~~~~-~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~-~~~~~~~~~~i~~-----~~~i~~G~SGG 268 (590)
.|+.|.... ..|+.+.+.||...... ..+..-+++...+.. +.........++. ....|.|||||
T Consensus 103 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 182 (234)
T 3s69_A 103 VPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGG 182 (234)
T ss_dssp CCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTC
T ss_pred eeeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCCcc
Confidence 898887654 56999999998643210 112222333222211 1101111123333 23568999999
Q ss_pred eEEeCCEEEEEEeeecC-CC--CceeEEeehHHHHHHHHHHHHcC
Q 007765 269 PAIMGNKVAGVAFQNLS-GA--ENIGYIIPVPVIKHFITGVVEHG 310 (590)
Q Consensus 269 Pl~~~G~vVGI~~~~~~-~~--~~~~~aip~~~i~~~l~~l~~~g 310 (590)
||+.+++++||++++.. .. ...+....+...++++++..+..
T Consensus 183 PL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 183 PLICNGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp EEEETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ceEEcCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 99988999999998754 21 23577788888888888876543
No 63
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.44 E-value=5.3e-12 Score=123.78 Aligned_cols=169 Identities=13% Similarity=0.153 Sum_probs=106.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC-----C--CcEEEEEEEEecC-------CCCeEEEEecCC-cccCcce
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----S--PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~-----~--~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (590)
..|+|.+|++.||||+|||+.+...+.+-... + .+.+..+-+..++ .+||||||++.+ .+.+.+.
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~ 102 (231)
T 2aiq_A 23 SLCGGTLINQEWVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIA 102 (231)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTBC
T ss_pred CeEEEEEEeCCEEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcEE
Confidence 56999999999999999999874433332110 0 1223344343333 469999999987 4566788
Q ss_pred eEEcCCCC-CCCCeEEEEecCCCCC-----C--c-eEEEeEEecccccccccCcceeeEEEEc-----ccccCCCCCceE
Q 007765 205 FLELGDIP-FLQQAVAVVGYPQGGD-----N--I-SVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSGGPA 270 (590)
Q Consensus 205 ~~~l~~~~-~~G~~V~~iG~p~g~~-----~--~-~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SGGPl 270 (590)
|+.|.... ..|+.++++||..... . + .+..-+++...+...... .....++.. ...|.|||||||
T Consensus 103 picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~~C~GDSGgPL 181 (231)
T 2aiq_A 103 PLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKG-LAATTLCAGILEGGKDTCKGDSGGPL 181 (231)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTT-CCSSEEEEECTTCSCBCCTTCTTCEE
T ss_pred eeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcC-CCcCcEEeccCCCCCcccCCcCCCcE
Confidence 99887654 5689999999865321 0 1 122223332222111111 111233332 357899999999
Q ss_pred EeCCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHHHc
Q 007765 271 IMGNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVVEH 309 (590)
Q Consensus 271 ~~~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~~~ 309 (590)
+.+|.++||++++. .. ....+....+...++++++..+.
T Consensus 182 ~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 182 ICNGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp EETTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred EECCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 98899999999873 21 23356778888888888876643
No 64
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.44 E-value=8.5e-12 Score=121.72 Aligned_cols=167 Identities=14% Similarity=0.130 Sum_probs=107.9
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~~-------~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..++. +|||||+++.+ .+...
T Consensus 27 ~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (227)
T 3fzz_A 27 KMFCGGFLVRDKFVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104 (227)
T ss_dssp EEEEEEEEEETTEEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eeEEEEEEEeCCEEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCc
Confidence 4679999999999999999995 455666531 123455555555554 69999999877 45667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC----CceEEEeEEeccc---ccc-cccCcceeeEEEE-----cccccCCCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD----NISVTKGVVSRVE---PTQ-YVHGATQLMAIQI-----DAAINPGNS 266 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~---~~~-~~~~~~~~~~i~~-----~~~i~~G~S 266 (590)
+.|+.|.... ..|+.+++.||..... ........+.-+. +.. +.........++. ....|.|||
T Consensus 105 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDs 184 (227)
T 3fzz_A 105 VRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTT
T ss_pred ccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCC
Confidence 8898887543 4589999999964211 1122222222221 111 1110001123343 235689999
Q ss_pred CceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 267 GGPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 267 GGPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
||||+.++.++||++++.......+....+...++++++..
T Consensus 185 GgPl~~~~~l~Gi~S~g~~c~~~p~vyt~V~~~~~WI~~~i 225 (227)
T 3fzz_A 185 GGPLVCKRAAAGIVSYGQTDGSAPQVFTRVLSFVSWIKKTM 225 (227)
T ss_dssp TCEEEETTEEEEEEEECCTTCSSSEEEEEGGGTHHHHHHHH
T ss_pred ccceEEecCCcEEEEECCCCCCCCeEEEEhHHhHHHHHHHH
Confidence 99999888999999987664444677777777777777654
No 65
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.43 E-value=2e-12 Score=127.58 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=101.4
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEEE
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAILI 193 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~------------------~~DlAlLk 193 (590)
..|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+|||||+
T Consensus 27 ~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 104 (240)
T 1sgf_A 27 YQCGGVLLDRNWVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLR 104 (240)
T ss_dssp CCEEEEECSSSEEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEEE
T ss_pred eEEEEEEecCCEEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEEEE
Confidence 57999999999999999999754 3444321 12334444343332 46999999
Q ss_pred ecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCCC--------ceEEEeEEecccccccccCcceeeEEEEc-----
Q 007765 194 VESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQID----- 258 (590)
Q Consensus 194 v~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~----- 258 (590)
++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+..-+++...+............++..
T Consensus 105 L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 184 (240)
T 1sgf_A 105 LSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGG 184 (240)
T ss_dssp ESSCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEECSSS
T ss_pred eCCcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCCCC
Confidence 9987 466678899997654 56899999998643210 11222233322221111111111233332
Q ss_pred ccccCCCCCceEEeCCEEEEEEeeecC-C--CCceeEEeehHHHHHHHHHHHH
Q 007765 259 AAINPGNSGGPAIMGNKVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 259 ~~i~~G~SGGPl~~~G~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l~~ 308 (590)
...|.|||||||+.+|.++||++++.. . ....+....+...++++++..+
T Consensus 185 ~~~C~GDSGgPL~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 185 SYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp EEECCCCTTCEEEETTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCCCcCcEEEccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 246899999999988999999998733 1 1235667777777888877654
No 66
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.43 E-value=6.3e-12 Score=123.51 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=107.9
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC------CCc-EEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPT-KYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~------~~~-~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
...|+|.+|++.||||+|||+.....+.+-... +.. .+..+.+..++ .+||||||++.+ .+.+.+
T Consensus 25 ~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v 104 (238)
T 4e7n_A 25 TLFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHI 104 (238)
T ss_dssp CEEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTTB
T ss_pred CEEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCce
Confidence 357999999999999999999865444433211 111 12223332232 469999999987 456678
Q ss_pred eeEEcCCCC-CCCCeEEEEecCCCCCC--------ceEEEeEEeccccccccc---CcceeeEEEE-----cccccCCCC
Q 007765 204 HFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVH---GATQLMAIQI-----DAAINPGNS 266 (590)
Q Consensus 204 ~~~~l~~~~-~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~~~~---~~~~~~~i~~-----~~~i~~G~S 266 (590)
.|+.|.... ..|+.+.+.||...... ..+..-+++...+..... .......++. ....|.|||
T Consensus 105 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 184 (238)
T 4e7n_A 105 APFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDS 184 (238)
T ss_dssp CCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCT
T ss_pred eeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCC
Confidence 898887654 55999999998643210 112333333322211110 0111123443 235689999
Q ss_pred CceEEeCCEEEEEEeeecC-C--CCceeEEeehHHHHHHHHHHHHc
Q 007765 267 GGPAIMGNKVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGVVEH 309 (590)
Q Consensus 267 GGPl~~~G~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l~~~ 309 (590)
||||+.+++++||++++.. . ....+....+...++++++..+.
T Consensus 185 GgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 230 (238)
T 4e7n_A 185 GGPLICNGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAG 230 (238)
T ss_dssp TCEEEETTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTT
T ss_pred CcceEECCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhc
Confidence 9999988999999998754 1 12456777888888888877643
No 67
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.43 E-value=7.3e-13 Score=128.37 Aligned_cols=157 Identities=18% Similarity=0.224 Sum_probs=101.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEE----EEEEcC-----CCcEEEEEEEEec--------CCCCeEEEEecCCcc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFV----LVRKHG-----SPTKYRAQVEAVG--------HECDLAILIVESDEF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i----~V~~~~-----~~~~~~a~vv~~d--------~~~DlAlLkv~~~~~ 199 (590)
...|+|++|++.+|||||||+.+. ..+ .|.+.. .+..+..+-+..+ ..+||||||++.+ +
T Consensus 29 ~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-I 107 (215)
T ss_dssp SCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-H
T ss_pred CceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-C
Confidence 357999999999999999999753 344 666531 1223455444443 3569999999985 5
Q ss_pred cCcceeEEcCCCC-CCCCeEEEEecCCCC------CCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-
Q 007765 200 WEGMHFLELGDIP-FLQQAVAVVGYPQGG------DNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI- 271 (590)
Q Consensus 200 ~~~~~~~~l~~~~-~~G~~V~~iG~p~g~------~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~- 271 (590)
.+.+.|+.|.... ..|+.++++||+... ....+...+++...+. ........|.|||||||+
T Consensus 108 ~~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~----------~~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTN----------LAYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSS----------EEEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccch----------heeeccccCCCCCCCeeEc
Confidence 5568888887654 568999999997321 0012233333221111 111356779999999999
Q ss_pred eCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHH
Q 007765 272 MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 272 ~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l 306 (590)
.+|.|+||++++.......+....+....+++++.
T Consensus 178 ~~g~lvGi~S~g~~c~~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 178 QNQQIVGVHNAGYSNGTINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TTSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHH
T ss_pred cCCeEEEEEecccCCCccCceeEechHHHHHHHHH
Confidence 69999999998754223334445555556666553
No 68
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.42 E-value=3.5e-12 Score=125.71 Aligned_cols=168 Identities=13% Similarity=0.101 Sum_probs=104.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCC---CcEEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD---STFVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~---~~~i~V~~~~~--------~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.||||+|||+.+ ...+.|.+... .+.+..+-+..++ .+||||||++.+ .+
T Consensus 25 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 104 (240)
T 1mza_A 25 HHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKL 104 (240)
T ss_dssp EEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCC
T ss_pred ceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCccc
Confidence 36799999999999999999874 45677776311 2344554444443 479999999987 55
Q ss_pred cCcceeEEcCC-CC-CCCCeEEEEecCCCCC-----CceEEEeEE---eccccc---ccccC-cceeeEEEEc-----cc
Q 007765 200 WEGMHFLELGD-IP-FLQQAVAVVGYPQGGD-----NISVTKGVV---SRVEPT---QYVHG-ATQLMAIQID-----AA 260 (590)
Q Consensus 200 ~~~~~~~~l~~-~~-~~G~~V~~iG~p~g~~-----~~~v~~G~V---s~~~~~---~~~~~-~~~~~~i~~~-----~~ 260 (590)
.+.+.|+.|.. .. ..|+.+++.||..... ...+....+ +.-.+. .+... ......++.. ..
T Consensus 105 ~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 184 (240)
T 1mza_A 105 NKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKD 184 (240)
T ss_dssp BTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCC
T ss_pred CCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCc
Confidence 66788988876 22 4589999999864321 112222222 221111 11110 0111234432 35
Q ss_pred ccCCCCCceEEeCCEEEEEEeeecCCC--CceeEEeehHH-HHHHHHHH
Q 007765 261 INPGNSGGPAIMGNKVAGVAFQNLSGA--ENIGYIIPVPV-IKHFITGV 306 (590)
Q Consensus 261 i~~G~SGGPl~~~G~vVGI~~~~~~~~--~~~~~aip~~~-i~~~l~~l 306 (590)
.|.|||||||+.+|.++||++++.... ...+....+.. ..+++++.
T Consensus 185 ~C~GDSGGPL~~~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~ 233 (240)
T 1mza_A 185 SCKGDAGGPLICKGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSN 233 (240)
T ss_dssp CCTTCTTCEEEETTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHH
T ss_pred cCCCCCCCeeEECCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHh
Confidence 789999999998889999999875422 23455555555 66666654
No 69
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.42 E-value=2.5e-12 Score=124.87 Aligned_cols=162 Identities=17% Similarity=0.143 Sum_probs=103.0
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcCC--------CcEEEEEEEEec------CCCCeEEEEecCC-cccC
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHGS--------PTKYRAQVEAVG------HECDLAILIVESD-EFWE 201 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~~--------~~~~~a~vv~~d------~~~DlAlLkv~~~-~~~~ 201 (590)
...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+ ..+||||||++.+ .+.+
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~ 102 (218)
T 2z7f_E 23 GHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINA 102 (218)
T ss_dssp EEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSS
T ss_pred CcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCCC
Confidence 357999999999999999999864 3567766321 134444433333 3479999999987 4566
Q ss_pred cceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEEeEEecccccccccCcceeeEEEE-----cccccCCCCCce
Q 007765 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGP 269 (590)
Q Consensus 202 ~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SGGP 269 (590)
.+.|+.|.... ..|+.+++.||...... .......+.-+ ...... . .++. ....|.||||||
T Consensus 103 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--~---~~Ca~~~~~~~~~C~GDSGgP 176 (218)
T 2z7f_E 103 NVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR--S---NVCTLVRGRQAGVCFGDSGSP 176 (218)
T ss_dssp SCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT--T---SEEEECTTSCCBCCTTCTTCE
T ss_pred ceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc--c---eeeeccCCCCCeeCCCcCCCc
Confidence 78898887643 35889999998643211 11122222111 111100 0 1222 245789999999
Q ss_pred EEeCCEEEEEEeeecC-CC--CceeEEeehHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLS-GA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~-~~--~~~~~aip~~~i~~~l~~l 306 (590)
|+.+|.++||+++... .. ...+....+....+++++.
T Consensus 177 l~~~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~ 216 (218)
T 2z7f_E 177 LVCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSI 216 (218)
T ss_dssp EEETTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred eEEccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHH
Confidence 9988899999998322 11 2246667777777777654
No 70
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.42 E-value=1.1e-11 Score=121.05 Aligned_cols=166 Identities=13% Similarity=0.133 Sum_probs=104.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 26 ~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 26 SHICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred ceEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 35799999999999999999975 45666531 12344555444554 469999999987 45667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC----CceEEEeEEecccc---cccccCcceeeEEEEc-----ccccCCCCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD----NISVTKGVVSRVEP---TQYVHGATQLMAIQID-----AAINPGNSG 267 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~~---~~~~~~~~~~~~i~~~-----~~i~~G~SG 267 (590)
+.|+.|.... ..|+.+.+.||..... ........+.-+.. ............++.. ...+.||||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 8898887643 3589999999864321 11222222322221 1111111111234442 233589999
Q ss_pred ceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHHHHH
Q 007765 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 268 GPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l 306 (590)
|||+.+|.++||++++.......+....+...++++++.
T Consensus 184 gPL~~~~~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI~~~ 222 (227)
T 1euf_A 184 GPLVCNGVAQGIVSYGRNDGTTPDVYTRISSFLSWIHST 222 (227)
T ss_dssp CEEEETTEEEEEEEECCTTCCSCEEEEEGGGTHHHHHHH
T ss_pred CceEECCEEEEEEEEeCCCCCCCeEEEEHHHhHHHHHHH
Confidence 999988999999998743333456667777777777654
No 71
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.41 E-value=2.5e-11 Score=119.61 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=108.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcC----------CCcEEEEEEEEecC-CCCeEEEEecCC-cccCcce
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG----------SPTKYRAQVEAVGH-ECDLAILIVESD-EFWEGMH 204 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~----------~~~~~~a~vv~~d~-~~DlAlLkv~~~-~~~~~~~ 204 (590)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+.+++ .+|||||+++.+ .+.+.+.
T Consensus 22 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v~ 101 (240)
T 1si5_H 22 KHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVS 101 (240)
T ss_dssp SEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSCC
T ss_pred CeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCcee
Confidence 367999999999999999999754 467777631 12234444334454 689999999987 4566788
Q ss_pred eEEcCCCC---CCCCeEEEEecCCCCCC------ceEEEeEEecccccccccCc--ceeeEEEE-----cccccCCCCCc
Q 007765 205 FLELGDIP---FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHGA--TQLMAIQI-----DAAINPGNSGG 268 (590)
Q Consensus 205 ~~~l~~~~---~~G~~V~~iG~p~g~~~------~~v~~G~Vs~~~~~~~~~~~--~~~~~i~~-----~~~i~~G~SGG 268 (590)
|+.|.... ..|+.++++||...... ..+..-+++.-.+.....+. .....++. ....|.|||||
T Consensus 102 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 181 (240)
T 1si5_H 102 TIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGG 181 (240)
T ss_dssp CCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTC
T ss_pred ccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCC
Confidence 88887642 35899999998653211 11222233322222111110 11123333 23578999999
Q ss_pred eEE-eCC---EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHH
Q 007765 269 PAI-MGN---KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 269 Pl~-~~G---~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
||+ .++ .++||++++.... ...+....+...++++++...
T Consensus 182 PL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 182 PLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp EEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred cEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 999 443 8999999875421 345677888888888887664
No 72
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.41 E-value=7.6e-12 Score=121.88 Aligned_cols=165 Identities=15% Similarity=0.135 Sum_probs=106.9
Q ss_pred ceEEEEEEeCCeEEEcCcccCC---CcEEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 140 TTGSGFVIPGKKILTNAHVVAD---STFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~---~~~i~V~~~~-----~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
..|+|.+|++.||||+|||+.+ ...+.|.+.. +++.+..+-+..++ .+|||||+++.+ .+.+.+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 103 (222)
T 1eq9_A 24 HRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLV 103 (222)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCce
Confidence 5799999999999999999976 3467777631 23455655555554 469999999987 566678
Q ss_pred eeEEcCCCC--CCCCeEEEEecCCCCC----CceE---EEeEEecccccccccCcceeeEEEEc----ccccCCCCCceE
Q 007765 204 HFLELGDIP--FLQQAVAVVGYPQGGD----NISV---TKGVVSRVEPTQYVHGATQLMAIQID----AAINPGNSGGPA 270 (590)
Q Consensus 204 ~~~~l~~~~--~~G~~V~~iG~p~g~~----~~~v---~~G~Vs~~~~~~~~~~~~~~~~i~~~----~~i~~G~SGGPl 270 (590)
.|+.|.... ..|+.+++.||..... ...+ ..-+++...+...... .....++.. ...|.|||||||
T Consensus 104 ~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGgPL 182 (222)
T 1eq9_A 104 QPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGGPL 182 (222)
T ss_dssp CCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTCEE
T ss_pred EccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccceE
Confidence 999997654 3588999999864321 0112 2222222111100001 111234432 357899999999
Q ss_pred EeCCEEEEEEeeecCCC-CceeEEeehHHHHHHHHH
Q 007765 271 IMGNKVAGVAFQNLSGA-ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 271 ~~~G~vVGI~~~~~~~~-~~~~~aip~~~i~~~l~~ 305 (590)
+.+|.++||++++.... ...+....+....+++++
T Consensus 183 ~~~~~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~ 218 (222)
T 1eq9_A 183 VANGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINA 218 (222)
T ss_dssp EETTEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHH
T ss_pred EECCEEEEEEEECCCcCCCCCCEEEEHHHHHHHHHH
Confidence 98889999999875422 235666666766666654
No 73
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.41 E-value=9.9e-12 Score=121.43 Aligned_cols=168 Identities=18% Similarity=0.213 Sum_probs=106.0
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCc--EEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-ccc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADST--FVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EFW 200 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~--~i~V~~~~~--------~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~ 200 (590)
...|+|.+|++.+|||+|||+.+.. .+.|.+... .+.+...-+..++ .+||||||++.+ .+.
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~ 102 (228)
T 2xw9_A 23 AHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLG 102 (228)
T ss_dssp EEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCB
T ss_pred CeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 3579999999999999999997543 677776311 2345555455554 469999999987 555
Q ss_pred CcceeEEcCCCC---CCCCeEEEEecCCCCCC----ceE---EEeEEeccccccccc--CcceeeEEEEc---ccccCCC
Q 007765 201 EGMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISV---TKGVVSRVEPTQYVH--GATQLMAIQID---AAINPGN 265 (590)
Q Consensus 201 ~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v---~~G~Vs~~~~~~~~~--~~~~~~~i~~~---~~i~~G~ 265 (590)
+.+.|+.|.... ..|+.+.+.||...... ... ..-+++...+..... +......++.. ...|.||
T Consensus 103 ~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 182 (228)
T 2xw9_A 103 PAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGD 182 (228)
T ss_dssp TTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTC
T ss_pred CCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCCC
Confidence 678888887532 45889999998643210 111 222232222211111 11111234432 3568999
Q ss_pred CCceEEeCCEEEEEEeeecCC---CCceeEEeehHHHHHHHHHH
Q 007765 266 SGGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 266 SGGPl~~~G~vVGI~~~~~~~---~~~~~~aip~~~i~~~l~~l 306 (590)
|||||+.+|.++||+++...+ ....+....+...++++++.
T Consensus 183 sGgPL~~~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 226 (228)
T 2xw9_A 183 AGGPLVCGGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226 (228)
T ss_dssp TTCEEEETTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHH
T ss_pred CcccEEECCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHH
Confidence 999999888999999986521 12356677777777777764
No 74
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.41 E-value=6.9e-12 Score=123.39 Aligned_cols=166 Identities=14% Similarity=0.154 Sum_probs=104.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEEE
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAILI 193 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~------------------~~DlAlLk 193 (590)
..|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (238)
T 1spj_A 24 FQCGGILVHRQWVLTAAHCISDN--YQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLR 101 (238)
T ss_dssp EEEEEEEEETTEEEECGGGCCSS--EEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEEE
T ss_pred eeEEEEEecCCEEEEcHHhCCCC--ceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEEE
Confidence 57999999999999999999754 4454421 12334444343333 35999999
Q ss_pred ecCC-c-ccCcceeEEcCCCC-CCCCeEEEEecCCCCC------C--ceEEEeEEecccccccccCcceeeEEEEc----
Q 007765 194 VESD-E-FWEGMHFLELGDIP-FLQQAVAVVGYPQGGD------N--ISVTKGVVSRVEPTQYVHGATQLMAIQID---- 258 (590)
Q Consensus 194 v~~~-~-~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~------~--~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~---- 258 (590)
++.+ . +.+.+.|+.|.... ..|+.+++.||..... . ..+..-+++.-.+............++..
T Consensus 102 L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 181 (238)
T 1spj_A 102 LTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHLEG 181 (238)
T ss_dssp ESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTC
T ss_pred ECccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCCCC
Confidence 9987 3 56678888887654 5689999999864321 0 11222233322221111111111234432
Q ss_pred -ccccCCCCCceEEeCCEEEEEEeeec-CC--CCceeEEeehHHHHHHHHHHH
Q 007765 259 -AAINPGNSGGPAIMGNKVAGVAFQNL-SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 -~~i~~G~SGGPl~~~G~vVGI~~~~~-~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+.+|.++||++++. .. ....+....+...++++++..
T Consensus 182 ~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 234 (238)
T 1spj_A 182 GKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234 (238)
T ss_dssp SSBCCTTCTTCEEEETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCCCCCCCcEEEcCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 35789999999998899999999873 21 123566777777777777654
No 75
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.41 E-value=1.2e-11 Score=121.38 Aligned_cols=169 Identities=17% Similarity=0.157 Sum_probs=105.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCC----CcEEEEEEcC----------CCcEEEEEEEEecC-CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG----------SPTKYRAQVEAVGH-ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~----~~~i~V~~~~----------~~~~~~a~vv~~d~-~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+ ...+.|.+.. ..+.+...-+..++ .+|||||+++.+ .+.+.
T Consensus 21 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~~ 100 (234)
T 2asu_B 21 QHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQR 100 (234)
T ss_dssp CEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSSS
T ss_pred CEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCCc
Confidence 46799999999999999999964 2456666531 12334444444454 589999999987 56667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCCC---ceEEE---eEEecccccccccCcceeeEEEEc-----ccccCCCCCc
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN---ISVTK---GVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSGG 268 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~~---~~v~~---G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SGG 268 (590)
+.|+.|.... ..|+.+++.||...... ..... -+++.-.+............++.. ...|.|||||
T Consensus 101 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 180 (234)
T 2asu_B 101 VALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGG 180 (234)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTTC
T ss_pred EeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCCC
Confidence 8899887643 35899999998643211 12222 233322221111111111234432 3568999999
Q ss_pred eEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 269 PAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 269 Pl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
||+ . +| .++||++++.... ...+....+....+++++..
T Consensus 181 PL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 225 (234)
T 2asu_B 181 PLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225 (234)
T ss_dssp EEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred ceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 999 4 33 7999999875422 23566677777777776643
No 76
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.41 E-value=7e-12 Score=122.75 Aligned_cols=170 Identities=16% Similarity=0.129 Sum_probs=109.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCC--CcEEEEEEcC-----CCcEEEEEEEEec------CCCCeEEEEecCC-cccC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD--STFVLVRKHG-----SPTKYRAQVEAVG------HECDLAILIVESD-EFWE-GM 203 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~--~~~i~V~~~~-----~~~~~~a~vv~~d------~~~DlAlLkv~~~-~~~~-~~ 203 (590)
...|+|.+|++.||||+|||+.+ ...+.|.+.. .+..+..+-+..+ ..+|||||+++.+ .+.+ .+
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~v 102 (235)
T 3h7t_A 23 KPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTT 102 (235)
T ss_dssp SCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSSC
T ss_pred CceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCccc
Confidence 35699999999999999999964 4567777631 1234444433332 3479999999987 4555 78
Q ss_pred eeEEcCCCC---CCCCeEEEEecCCCCC-----C---ceEEEeEEecccccccccCc-----ceeeEEEE-----ccccc
Q 007765 204 HFLELGDIP---FLQQAVAVVGYPQGGD-----N---ISVTKGVVSRVEPTQYVHGA-----TQLMAIQI-----DAAIN 262 (590)
Q Consensus 204 ~~~~l~~~~---~~G~~V~~iG~p~g~~-----~---~~v~~G~Vs~~~~~~~~~~~-----~~~~~i~~-----~~~i~ 262 (590)
.|+.|.... ..|+.+++.||..... . ..+..-+++...+....... .....++. ....|
T Consensus 103 ~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 182 (235)
T 3h7t_A 103 KKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIG 182 (235)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCC
T ss_pred cceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCccc
Confidence 888887653 4589999999864311 1 12222333322221111000 11123443 34568
Q ss_pred CCCCCceEEeCCEEEEEEeeecCCC-CceeEEeehHHHHHHHHHHHH
Q 007765 263 PGNSGGPAIMGNKVAGVAFQNLSGA-ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 263 ~G~SGGPl~~~G~vVGI~~~~~~~~-~~~~~aip~~~i~~~l~~l~~ 308 (590)
.|||||||+.+|+++||++++.... ...+....+....+++++..+
T Consensus 183 ~GDsGgPl~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~ 229 (235)
T 3h7t_A 183 YGDAGDPAVQNGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIIS 229 (235)
T ss_dssp TTCTTCEEEETTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHT
T ss_pred cCCCCCceeeCCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHh
Confidence 9999999999999999999875522 345677888888888887653
No 77
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.39 E-value=3.3e-12 Score=125.97 Aligned_cols=178 Identities=17% Similarity=0.135 Sum_probs=108.9
Q ss_pred CCccCCCCCCceEEEEEEeCCeEEEcCcccCC-------CcEEEEEEcCCC-------cEEEEEEEEecC----------
Q 007765 130 LPWQNKSQRETTGSGFVIPGKKILTNAHVVAD-------STFVLVRKHGSP-------TKYRAQVEAVGH---------- 185 (590)
Q Consensus 130 ~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~-------~~~i~V~~~~~~-------~~~~a~vv~~d~---------- 185 (590)
.||+-.......|+|.+|++.||||+|||+.+ ...+.|.+.... ..+..+-+..++
T Consensus 12 ~Pw~v~l~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~ 91 (242)
T 2qy0_B 12 FPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNF 91 (242)
T ss_dssp STTEEEEESSSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCC
T ss_pred CCcEEEEccCCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCC
Confidence 46654443345799999999999999999973 234566653111 123344344433
Q ss_pred CCCeEEEEecCC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCCC--ceEEEeEEeccc---ccc-ccc----Ccce
Q 007765 186 ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--ISVTKGVVSRVE---PTQ-YVH----GATQ 251 (590)
Q Consensus 186 ~~DlAlLkv~~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~--~~v~~G~Vs~~~---~~~-~~~----~~~~ 251 (590)
.+||||||++.+ .+.+.+.|+.|.... ..|..+++.||...... .......+.-+. +.. +.. ....
T Consensus 92 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~ 171 (242)
T 2qy0_B 92 EGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFS 171 (242)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCC
T ss_pred CCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCC
Confidence 349999999987 566678899887654 35889999998653221 122222222211 111 100 0011
Q ss_pred eeEEEEc-----ccccCCCCCceEE-eCC-----EEEEEEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 252 LMAIQID-----AAINPGNSGGPAI-MGN-----KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 252 ~~~i~~~-----~~i~~G~SGGPl~-~~G-----~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
...++.. ...|.|||||||+ .++ .++||++++.....+.+....+....+++++..
T Consensus 172 ~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~~ 238 (242)
T 2qy0_B 172 QNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 238 (242)
T ss_dssp TTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHT
T ss_pred CCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHh
Confidence 1234442 3578999999999 554 599999987653334567777777777776643
No 78
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.39 E-value=2.1e-11 Score=120.62 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=107.7
Q ss_pred CceEEEEEEeCCeEEEcCcccCC----------------CcEEEEEEcC--------CCcEEEEEEEEecCC-------C
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD----------------STFVLVRKHG--------SPTKYRAQVEAVGHE-------C 187 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~----------------~~~i~V~~~~--------~~~~~~a~vv~~d~~-------~ 187 (590)
...|+|.+|++.+|||+|||+.+ ...+.|.+.. ..+.+..+-+..++. +
T Consensus 24 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~ 103 (251)
T 3gov_B 24 QPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFEN 103 (251)
T ss_dssp CEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTBT
T ss_pred CeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCCC
Confidence 35799999999999999999964 2456777531 123445555555553 6
Q ss_pred CeEEEEecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCCC------ceEEEeEEeccccccccc---CcceeeEEE
Q 007765 188 DLAILIVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVH---GATQLMAIQ 256 (590)
Q Consensus 188 DlAlLkv~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~------~~v~~G~Vs~~~~~~~~~---~~~~~~~i~ 256 (590)
|||||+++.+ .+...+.|+.|.... ..|+.+++.||...... ..+...+++.-.+..... .......++
T Consensus 104 DIAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~C 183 (251)
T 3gov_B 104 DVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMIC 183 (251)
T ss_dssp CCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTEEE
T ss_pred CEEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCcEE
Confidence 9999999876 456678898887654 56899999998643211 122223333222211110 011112344
Q ss_pred Ec-----ccccCCCCCceEE-eC---C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 257 ID-----AAINPGNSGGPAI-MG---N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 257 ~~-----~~i~~G~SGGPl~-~~---G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
.. ...|.|||||||+ .+ | .++||++++.... ...+....+...++++++..
T Consensus 184 a~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 247 (251)
T 3gov_B 184 AGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVT 247 (251)
T ss_dssp ESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHH
T ss_pred ecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHh
Confidence 42 3568999999999 53 2 6999999875422 23466777777777777654
No 79
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.39 E-value=5.1e-13 Score=116.00 Aligned_cols=97 Identities=23% Similarity=0.274 Sum_probs=78.9
Q ss_pred CccccccccccceeeeccHhhhhhcCCC-----CCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCccccccc
Q 007765 310 GKYVGFCSLGLSCQTTENVQLRNNFGMR-----SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNR 383 (590)
Q Consensus 310 g~~~~~~~lGi~~~~~~~~~~~~~lgl~-----~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~ 383 (590)
|++. +||||+.++.+ ++.+++.++++ ....|++|..|.++|||+++ |++||+|++|||+++.++.++.
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVY---- 74 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHH----
Confidence 3455 89999999999 89999998873 23579999999999999999 9999999999999999887543
Q ss_pred ccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecC
Q 007765 384 ERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLL 421 (590)
Q Consensus 384 ~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 421 (590)
..+.. ++.+.++|.|+|+..++.+++...
T Consensus 75 ------~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 75 ------EAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp ------HHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred ------HHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 44433 688999999999998888876543
No 80
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.39 E-value=1.7e-11 Score=120.28 Aligned_cols=168 Identities=18% Similarity=0.157 Sum_probs=104.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+ ....|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 101 (234)
T 1orf_A 23 KTICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKY 101 (234)
T ss_dssp SCEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSS
T ss_pred ceEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCCC
Confidence 35799999999999999999975 344565531 12344555454443 469999999987 45667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC----C---ceEEEeEEeccccc---ccccCc-ceeeEEEEc-----ccccC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD----N---ISVTKGVVSRVEPT---QYVHGA-TQLMAIQID-----AAINP 263 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~----~---~~v~~G~Vs~~~~~---~~~~~~-~~~~~i~~~-----~~i~~ 263 (590)
+.|+.|.... ..|+.+.+.||..... . ..+..-+++.-.+. .+.... .....++.. ...|.
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 181 (234)
T 1orf_A 102 VTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCN 181 (234)
T ss_dssp SCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCT
T ss_pred eeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCC
Confidence 8888887643 3589999999864321 0 11222233322221 111011 000233332 35689
Q ss_pred CCCCceEEeCCEEEEEEeeec--CCC--CceeEEeehH-HHHHHHHHHH
Q 007765 264 GNSGGPAIMGNKVAGVAFQNL--SGA--ENIGYIIPVP-VIKHFITGVV 307 (590)
Q Consensus 264 G~SGGPl~~~G~vVGI~~~~~--~~~--~~~~~aip~~-~i~~~l~~l~ 307 (590)
|||||||+.+|.++||++++. ... ...+....+. ...+++++..
T Consensus 182 GDSGgPL~~~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 182 GDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp TCTTCEEEETTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred CCCCCeEEECCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 999999998889999999876 211 2345566666 6666666543
No 81
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.39 E-value=3.1e-11 Score=119.01 Aligned_cols=168 Identities=18% Similarity=0.132 Sum_probs=106.8
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------C--CCeEEEEecCC-cccC
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------E--CDLAILIVESD-EFWE 201 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~--~DlAlLkv~~~-~~~~ 201 (590)
..|+|.+|++.||||+|||+.....+.|.+.. ..+.+..+-+..++ . +||||||++.+ .+.+
T Consensus 28 ~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (241)
T 1bru_P 28 HTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTD 107 (241)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCCS
T ss_pred eEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccCC
Confidence 57999999999999999999855667777631 12345555454544 2 79999999987 5666
Q ss_pred cceeEEcCCCC---CCCCeEEEEecCCCCC----C---ceEEEeEEeccccccc-ccC-cceeeEEEEc----ccccCCC
Q 007765 202 GMHFLELGDIP---FLQQAVAVVGYPQGGD----N---ISVTKGVVSRVEPTQY-VHG-ATQLMAIQID----AAINPGN 265 (590)
Q Consensus 202 ~~~~~~l~~~~---~~G~~V~~iG~p~g~~----~---~~v~~G~Vs~~~~~~~-~~~-~~~~~~i~~~----~~i~~G~ 265 (590)
.+.|+.|.... ..|+.+++.||..... . ..+..-+++...+... ..+ ......++.. ...|.||
T Consensus 108 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 187 (241)
T 1bru_P 108 KIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGD 187 (241)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTC
T ss_pred ccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCCC
Confidence 78888887643 3588999999864311 0 1122223332222110 000 0111234442 3568999
Q ss_pred CCceEE-e--CC--EEEEEEeeecC--C--CCceeEEeehHHHHHHHHHHH
Q 007765 266 SGGPAI-M--GN--KVAGVAFQNLS--G--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 266 SGGPl~-~--~G--~vVGI~~~~~~--~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
|||||+ . +| .|+||++++.. . ....+....+....+++++..
T Consensus 188 SGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 238 (241)
T 1bru_P 188 SGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238 (241)
T ss_dssp TTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 999999 5 46 89999998752 1 123466677777777777654
No 82
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.38 E-value=1.2e-11 Score=121.64 Aligned_cols=165 Identities=16% Similarity=0.149 Sum_probs=104.0
Q ss_pred eEEEEEEeCCeEEEcCcccCCC-----cEEEEEEcC------CC--cEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 141 TGSGFVIPGKKILTNAHVVADS-----TFVLVRKHG------SP--TKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 141 ~GsGfiI~~g~IlT~aHvv~~~-----~~i~V~~~~------~~--~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
.|+|.+|++.+|||+|||+.+. ..+.|.+.. ++ +.+..+-+..++ .+||||||++.+ .+
T Consensus 29 ~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 108 (237)
T 2f91_A 29 FCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTF 108 (237)
T ss_dssp EEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCC
T ss_pred eEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCccc
Confidence 4999999999999999999753 457777631 11 345555455554 469999999987 56
Q ss_pred cCcceeEEcCCCC-CCCCeEEEEecCCCCCC-------ceEEEeEEecccccc-cccCcceeeEEEEc-----ccccCCC
Q 007765 200 WEGMHFLELGDIP-FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ-YVHGATQLMAIQID-----AAINPGN 265 (590)
Q Consensus 200 ~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~-------~~v~~G~Vs~~~~~~-~~~~~~~~~~i~~~-----~~i~~G~ 265 (590)
.+.+.|+.|.... ..++.+++.||...... ..+..-+++.-.+.. +.........++.. ...|.||
T Consensus 109 ~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 188 (237)
T 2f91_A 109 NDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGD 188 (237)
T ss_dssp BTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTC
T ss_pred CCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCCCc
Confidence 6678999998654 56889999998643210 112222333222211 11011111234442 3568999
Q ss_pred CCceEEeCC----EEEEEEeeecCCC--CceeEEeehHHHHHHHHH
Q 007765 266 SGGPAIMGN----KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 266 SGGPl~~~G----~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~ 305 (590)
|||||+.++ .++||++++.... ...+....+...++++++
T Consensus 189 SGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 234 (237)
T 2f91_A 189 SGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKA 234 (237)
T ss_dssp TTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHH
T ss_pred CCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHH
Confidence 999999333 8999999875422 234566666666666654
No 83
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.37 E-value=2e-11 Score=120.35 Aligned_cols=168 Identities=17% Similarity=0.125 Sum_probs=107.2
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC-cccC
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-EFWE 201 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~---------~~DlAlLkv~~~-~~~~ 201 (590)
..|+|.+|++.+|||+|||+.+...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 28 ~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (240)
T 1gvk_B 28 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNS 107 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCBT
T ss_pred ceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccCC
Confidence 57999999999999999999887777887631 12344555454544 569999999987 4566
Q ss_pred cceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEE---EeEEeccccccc-ccC-cceeeEEEEc----ccccCCC
Q 007765 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVT---KGVVSRVEPTQY-VHG-ATQLMAIQID----AAINPGN 265 (590)
Q Consensus 202 ~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~---~G~Vs~~~~~~~-~~~-~~~~~~i~~~----~~i~~G~ 265 (590)
.+.|+.|.... ..|+.+++.||...... ..+. .-+++...+... ..+ ......++.. ...|.||
T Consensus 108 ~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 187 (240)
T 1gvk_B 108 YVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGD 187 (240)
T ss_dssp TBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTTC
T ss_pred CccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCCC
Confidence 78888887543 35889999998643211 1122 222322111110 000 0111234442 3568999
Q ss_pred CCceEE--eCC--EEEEEEeeecC--C--CCceeEEeehHHHHHHHHHHH
Q 007765 266 SGGPAI--MGN--KVAGVAFQNLS--G--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 266 SGGPl~--~~G--~vVGI~~~~~~--~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
|||||+ .+| .++||++++.. . ....+....+....+++++..
T Consensus 188 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 237 (240)
T 1gvk_B 188 SGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237 (240)
T ss_dssp TTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 999999 378 89999998742 1 123566677777777776654
No 84
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.37 E-value=1e-12 Score=122.30 Aligned_cols=118 Identities=20% Similarity=0.170 Sum_probs=79.7
Q ss_pred CCceEEEEEEe-CCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCCCCCC
Q 007765 138 RETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQ 216 (590)
Q Consensus 138 ~~~~GsGfiI~-~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~ 216 (590)
..++|+||.|+ +++||||+|||.+.+. .|+. ++..+. +.+|+..|+|++++.... ..+|.++|+.....|.
T Consensus 28 ~~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~---~~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~ 99 (213)
T 3fan_A 28 SMGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQM---LDFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGR 99 (213)
T ss_dssp SEEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEE---EECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEE
T ss_pred CCCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEE---EEecCCCcEEEEEccCcC--CCCCcceeeeeeccCc
Confidence 45788889998 6699999999999888 6665 666664 367999999999996521 2688888885444332
Q ss_pred eEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEE-eCCEEEEEEeeecC
Q 007765 217 AVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS 285 (590)
Q Consensus 217 ~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~-~~G~vVGI~~~~~~ 285 (590)
..+..-+ -+..|.|..- ..+.+ .++|||||||+ .+|+||||+++...
T Consensus 100 a~~~~~~-------gv~~G~i~~~------------~al~~---T~pGdSGsPVvn~dG~VIGVHt~s~~ 147 (213)
T 3fan_A 100 AYWLTSS-------GVEPGVIGNG------------FAFCF---TACGDSGSPVITEAGELVGVHTGSNK 147 (213)
T ss_dssp EEEEETT-------EEEEEEEETT------------EEEES---SCCCSTTCEEEETTSCEEEEEEC---
T ss_pred eEEEEcc-------CccccccccC------------CEEEe---cCCCCCCCccCCCCCcEEEEEeccCC
Confidence 2222211 2333444310 11222 26899999999 99999999997643
No 85
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.37 E-value=1.1e-11 Score=121.76 Aligned_cols=170 Identities=14% Similarity=0.124 Sum_probs=107.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFW 200 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~ 200 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.
T Consensus 25 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~ 104 (238)
T 1ym0_A 25 SHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFD 104 (238)
T ss_dssp EEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCS
T ss_pred ceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCcccc
Confidence 357999999999999999999864 567777631 12345555455544 469999999987 556
Q ss_pred CcceeEEcCCCC--CCCCeEEEEecCCCCC-----CceEEEeEE---ecccccc-cccCcceeeEEEEc-------cccc
Q 007765 201 EGMHFLELGDIP--FLQQAVAVVGYPQGGD-----NISVTKGVV---SRVEPTQ-YVHGATQLMAIQID-------AAIN 262 (590)
Q Consensus 201 ~~~~~~~l~~~~--~~G~~V~~iG~p~g~~-----~~~v~~G~V---s~~~~~~-~~~~~~~~~~i~~~-------~~i~ 262 (590)
+.+.|+.|.... ..++.+.+.||..... ........+ +...+.. +.........++.. ...|
T Consensus 105 ~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C 184 (238)
T 1ym0_A 105 INVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSC 184 (238)
T ss_dssp SSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCC
T ss_pred CcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccC
Confidence 678899887643 2588999999864321 111222222 2211111 11001111234331 4578
Q ss_pred CCCCCceEE-eC--C--EEEEEEeeecCCC-CceeEEeehHHHHHHHHHHHH
Q 007765 263 PGNSGGPAI-MG--N--KVAGVAFQNLSGA-ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 263 ~G~SGGPl~-~~--G--~vVGI~~~~~~~~-~~~~~aip~~~i~~~l~~l~~ 308 (590)
.|||||||+ .+ | .|+||++++.... ...+....+....+++++..+
T Consensus 185 ~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 185 QGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp TTTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 999999999 53 4 7999999875422 234666777777777776543
No 86
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.37 E-value=1.9e-11 Score=121.02 Aligned_cols=168 Identities=14% Similarity=0.137 Sum_probs=104.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+. ...|.+.. ..+.+..+-+..++ .+||||||++.+ .|.+.
T Consensus 39 ~~~CgGtLI~~~~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 117 (245)
T 1t8o_A 39 FHFCGGSLINENWVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQT 117 (245)
T ss_dssp CEEEEEEEEETTEEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTT
T ss_pred CeEEEEEEeeCCEEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCCc
Confidence 357999999999999999999763 33444421 12344554444443 469999999987 56667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCC-----CceE---EEeEEecccccccccCcceeeEEEE---cccccCCCCCc
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGD-----NISV---TKGVVSRVEPTQYVHGATQLMAIQI---DAAINPGNSGG 268 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~-----~~~v---~~G~Vs~~~~~~~~~~~~~~~~i~~---~~~i~~G~SGG 268 (590)
+.|+.|.... ..|+.+++.||..... ...+ ..-+++.-.+...........+++. ....|.|||||
T Consensus 118 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSGg 197 (245)
T 1t8o_A 118 VSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSGG 197 (245)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTTC
T ss_pred eeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCcC
Confidence 8899887543 3589999999864321 0112 2223332222111100001112333 23568999999
Q ss_pred eEE-e-CC--EEEEEEeeecCC--CCceeEEeehHHHHHHHHHHH
Q 007765 269 PAI-M-GN--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 269 Pl~-~-~G--~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
||+ . +| .++||++++... ....+....+....+++++..
T Consensus 198 PL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 242 (245)
T 1t8o_A 198 PLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242 (245)
T ss_dssp EEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHH
T ss_pred CEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHH
Confidence 999 3 45 799999987542 233566777777777777654
No 87
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.37 E-value=2.7e-11 Score=119.47 Aligned_cols=169 Identities=18% Similarity=0.161 Sum_probs=106.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCc-EEEEEEcC-----CCcEEEEEEEEec--------CCCCeEEEEecCC-cccCcce
Q 007765 140 TTGSGFVIPGKKILTNAHVVADST-FVLVRKHG-----SPTKYRAQVEAVG--------HECDLAILIVESD-EFWEGMH 204 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~-~i~V~~~~-----~~~~~~a~vv~~d--------~~~DlAlLkv~~~-~~~~~~~ 204 (590)
..|+|.+|++.||||+|||+.+.. .+.|.+.. .++.+..+-+..+ ..+||||||++.+ .+.+.+.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~ 103 (240)
T 2zgc_A 24 HLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIR 103 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSCC
T ss_pred eEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCcee
Confidence 579999999999999999998653 56776531 1234555444443 3469999999987 4566788
Q ss_pred eEEcCCCC---CCCCeEEEEecCCCCC----CceEEEe---EEecccccc--cccCcceeeEEEEc-----ccccCCCCC
Q 007765 205 FLELGDIP---FLQQAVAVVGYPQGGD----NISVTKG---VVSRVEPTQ--YVHGATQLMAIQID-----AAINPGNSG 267 (590)
Q Consensus 205 ~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~~G---~Vs~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~SG 267 (590)
|+.|.... ..|+.+++.||..... ...+... +++...+.. ..........++.. ...|.||||
T Consensus 104 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 183 (240)
T 2zgc_A 104 PLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSG 183 (240)
T ss_dssp CCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCTT
T ss_pred eeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCcc
Confidence 98887643 3589999999864321 0112222 222211111 11111111234432 356899999
Q ss_pred ceEEeCC--EEEEEEeeecC-C--CCceeEEeehHHHHHHHHHHHH
Q 007765 268 GPAIMGN--KVAGVAFQNLS-G--AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 268 GPl~~~G--~vVGI~~~~~~-~--~~~~~~aip~~~i~~~l~~l~~ 308 (590)
|||+.++ .++||++++.. . ....+....+...++++++..+
T Consensus 184 gPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 229 (240)
T 2zgc_A 184 GPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTG 229 (240)
T ss_dssp CEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHC
T ss_pred CeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 9999555 99999998732 1 1235667777777788877653
No 88
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.37 E-value=4.9e-13 Score=115.93 Aligned_cols=97 Identities=21% Similarity=0.358 Sum_probs=80.8
Q ss_pred CccccccccccceeeeccHhhhhhcCCC-----CCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCccccccc
Q 007765 310 GKYVGFCSLGLSCQTTENVQLRNNFGMR-----SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNR 383 (590)
Q Consensus 310 g~~~~~~~lGi~~~~~~~~~~~~~lgl~-----~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~ 383 (590)
|++. ++|||+.++.+ ++.+++.++++ ....|++|..|.++|||+++ |++||+|++|||+++.++.++.
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQ---- 74 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----
Confidence 4455 89999999999 79999988763 23579999999999999999 9999999999999999987643
Q ss_pred ccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEecC
Q 007765 384 ERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRLL 421 (590)
Q Consensus 384 ~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 421 (590)
..+ ..|+.+.++|.|+|+..++.+++...
T Consensus 75 ------~~l---~~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 75 ------EAV---LTESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp ------HHH---HHCSSEEEEEEETTEEEEEEECCEEE
T ss_pred ------HHH---hCCCeEEEEEEECCEEEEEEEEEeee
Confidence 344 24788999999999998888876644
No 89
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.36 E-value=2.6e-13 Score=143.39 Aligned_cols=135 Identities=12% Similarity=0.123 Sum_probs=52.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITL 418 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l 418 (590)
.|++|..|.++|||+++ |++||+|++|||+++.+|.+.. +..++.....+.++.|+|.|++...++.+..
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 46899999999999987 9999999999999999995421 2245555446778999999988766554422
Q ss_pred ecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccc
Q 007765 419 RLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGY 498 (590)
Q Consensus 419 ~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~ 498 (590)
.... ..+|+.+. +.+|..|.++++|+.+
T Consensus 304 ~~~~---------------~~lG~~i~-------------------------------------~g~I~~V~~gs~A~~a 331 (388)
T 3suz_A 304 PDLK---------------YQLGFSVQ-------------------------------------NGIICSLMRGGIAERG 331 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCC---------------CccceEEe-------------------------------------cCEEEEeecCCHHHHc
Confidence 1100 01244211 0157779999999999
Q ss_pred cccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEe
Q 007765 499 ERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 499 ~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~ 536 (590)
|+++||+|++|||++|. +++++++++++. ++.+.+++
T Consensus 332 GL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~-~~~v~L~V 370 (388)
T 3suz_A 332 GVRVGHRIIEINGQSVVATAHEKIVQALSNS-VGEIHMKT 370 (388)
T ss_dssp ----------------------------------------
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEE
Confidence 99999999999999997 578888888763 44444444
No 90
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.36 E-value=2.4e-11 Score=119.33 Aligned_cols=166 Identities=17% Similarity=0.170 Sum_probs=105.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCC--------CcEEEEEEEEecC---------CCCeEEEEecCC-cccC
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH---------ECDLAILIVESD-EFWE 201 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~--------~~~~~a~vv~~d~---------~~DlAlLkv~~~-~~~~ 201 (590)
..|+|.+|++.+|||+|||+.+...+.|.+... .+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 28 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~ 107 (236)
T 1elt_A 28 HTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNS 107 (236)
T ss_dssp EEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSS
T ss_pred eEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccCC
Confidence 579999999999999999998877788877421 2344555444443 569999999976 4566
Q ss_pred cceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEE---eEEeccccccc-ccC-cceeeEEEEc---ccccCCCC
Q 007765 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTK---GVVSRVEPTQY-VHG-ATQLMAIQID---AAINPGNS 266 (590)
Q Consensus 202 ~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~---G~Vs~~~~~~~-~~~-~~~~~~i~~~---~~i~~G~S 266 (590)
.+.|+.|.... ..|+.+.++||...... ..... -+++.-.+... ..+ ......++.. ...|.|||
T Consensus 108 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDS 187 (236)
T 1elt_A 108 AVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGDS 187 (236)
T ss_dssp SCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTCT
T ss_pred cEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCCC
Confidence 78888887643 35889999998653210 11222 22322111110 000 0111234432 35689999
Q ss_pred CceEE--eCC--EEEEEEeeecC-C---CCceeEEeehHHHHHHHHH
Q 007765 267 GGPAI--MGN--KVAGVAFQNLS-G---AENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 267 GGPl~--~~G--~vVGI~~~~~~-~---~~~~~~aip~~~i~~~l~~ 305 (590)
||||+ .+| .++||+++... + ....+....+....+++++
T Consensus 188 GgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 188 GGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred CCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 99999 378 89999998642 1 1235666677766666654
No 91
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.36 E-value=1.9e-11 Score=119.55 Aligned_cols=169 Identities=21% Similarity=0.181 Sum_probs=105.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCC-----CcEEEEEEEEecC-------CCCeEEEEecCCcccCcceeE
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS-----PTKYRAQVEAVGH-------ECDLAILIVESDEFWEGMHFL 206 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~-----~~~~~a~vv~~d~-------~~DlAlLkv~~~~~~~~~~~~ 206 (590)
...|+|.+|++.+|||+|||+.+...+.|.+... ...+..+-+..++ .+||||||++...+.+.+.|+
T Consensus 27 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~v~pi 106 (230)
T 2hlc_A 27 RVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPI 106 (230)
T ss_dssp EEEEEEEEEETTEEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECSCCCCCSSCCCC
T ss_pred CEEEEEEEeeCCEEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEecCCCcCCcEeee
Confidence 4579999999999999999999877788876421 2233433344443 479999999933566788999
Q ss_pred EcCCCC-----CCCCeEEEEecCCCCCC---c-eEEEeEEecccccc-cccCcceeeEEEEc----ccccCCCCCceEEe
Q 007765 207 ELGDIP-----FLQQAVAVVGYPQGGDN---I-SVTKGVVSRVEPTQ-YVHGATQLMAIQID----AAINPGNSGGPAIM 272 (590)
Q Consensus 207 ~l~~~~-----~~G~~V~~iG~p~g~~~---~-~v~~G~Vs~~~~~~-~~~~~~~~~~i~~~----~~i~~G~SGGPl~~ 272 (590)
.|.... ..++.+++.||...... + .+..-+++...+.. +.........++.. ...|.|||||||+.
T Consensus 107 cLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~ 186 (230)
T 2hlc_A 107 RLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVL 186 (230)
T ss_dssp BCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEE
T ss_pred EcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeEE
Confidence 887643 34788999998654221 1 11222233222211 11101111234432 35689999999993
Q ss_pred --CCEEEEEEeeecC---CCCceeEEeehHHHHHHHHHHH
Q 007765 273 --GNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 273 --~G~vVGI~~~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (590)
++.++||+++... .....+....+....+++++..
T Consensus 187 ~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 187 SDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp GGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHH
T ss_pred CcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhh
Confidence 4599999998652 1123455566677677766543
No 92
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.36 E-value=3e-11 Score=118.81 Aligned_cols=167 Identities=18% Similarity=0.195 Sum_probs=104.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCCC--------cEEEEEEcC---------CCcEEEEEEEEecC-------CCCeEEEEec
Q 007765 140 TTGSGFVIPGKKILTNAHVVADS--------TFVLVRKHG---------SPTKYRAQVEAVGH-------ECDLAILIVE 195 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~--------~~i~V~~~~---------~~~~~~a~vv~~d~-------~~DlAlLkv~ 195 (590)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++
T Consensus 25 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 104 (241)
T 3ncl_A 25 HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELE 104 (241)
T ss_dssp EEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred eEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 57999999999999999999643 456666531 12445555555555 4699999999
Q ss_pred CC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCC----CceEEEeEE---ecccccccccCcceeeEEEE-----cc
Q 007765 196 SD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD----NISVTKGVV---SRVEPTQYVHGATQLMAIQI-----DA 259 (590)
Q Consensus 196 ~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~~G~V---s~~~~~~~~~~~~~~~~i~~-----~~ 259 (590)
.+ .+.+.+.|+.|.... ..|+.+.+.||..... ........+ +...+............++. ..
T Consensus 105 ~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 184 (241)
T 3ncl_A 105 KPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGGV 184 (241)
T ss_dssp SCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCSS
T ss_pred CCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCCC
Confidence 87 566678898887543 3589999999854211 111222222 22111111111111123443 23
Q ss_pred cccCCCCCceEE-e--CCE--EEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 260 AINPGNSGGPAI-M--GNK--VAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 260 ~i~~G~SGGPl~-~--~G~--vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
..|.|||||||+ . +|+ ++||++++.... ...+....+...++++++.
T Consensus 185 ~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 185 DSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHH
T ss_pred ccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 568999999998 4 444 899999875422 2356667777777777653
No 93
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.35 E-value=2.1e-11 Score=120.17 Aligned_cols=169 Identities=18% Similarity=0.175 Sum_probs=108.0
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|+|.+|++.||||+|||+.+...+.|.+.. ..+.+..+.+..++ .+|||||+++.+ .|.+.
T Consensus 24 ~~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (241)
T 2jkh_A 24 EGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMN 103 (241)
T ss_dssp CEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred CcEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCCC
Confidence 467999999999999999999877777777631 12334555455544 469999999987 56667
Q ss_pred ceeEEcCCCC------CCCCeEEEEecCCCCC----C--c-eEEEeEEecccccccccCcceeeEEEEc-----ccccCC
Q 007765 203 MHFLELGDIP------FLQQAVAVVGYPQGGD----N--I-SVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPG 264 (590)
Q Consensus 203 ~~~~~l~~~~------~~G~~V~~iG~p~g~~----~--~-~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~G 264 (590)
+.|+.|.... ..++.+++.||..... . + .+..-+++.-.+............++.. ...|.|
T Consensus 104 v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~G 183 (241)
T 2jkh_A 104 VAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQG 183 (241)
T ss_dssp BCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCTT
T ss_pred EeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCcC
Confidence 8899887532 2478999999864321 0 1 1122223221111111111111234432 356899
Q ss_pred CCCceEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 265 NSGGPAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 265 ~SGGPl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
||||||+ . +| .++||++++.... ...+....+...++++++..
T Consensus 184 DsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (241)
T 2jkh_A 184 DSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232 (241)
T ss_dssp TTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHT
T ss_pred cCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHh
Confidence 9999999 3 56 5999999876422 23567777777777777654
No 94
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.35 E-value=4.5e-11 Score=116.37 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=104.9
Q ss_pred CCccCCCCCCceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC------CCcEEEEEEEEecC-------CCCeEEEE
Q 007765 130 LPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG------SPTKYRAQVEAVGH-------ECDLAILI 193 (590)
Q Consensus 130 ~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~------~~~~~~a~vv~~d~-------~~DlAlLk 193 (590)
.||.-... ..|+|.+|++.+|||+|||+.+. ..+.|.+.. +...+...-+..++ .+||||||
T Consensus 12 ~Pw~v~l~--~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~ 89 (224)
T 3beu_A 12 FPFMVRLS--MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIK 89 (224)
T ss_dssp STTEEEET--TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEE
T ss_pred CCEEEEEC--CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEE
Confidence 46654432 35999999999999999999864 346666531 12345554455554 35999999
Q ss_pred ecCCcccCcceeEEcCCCC-CCCCeEEEEecCCCCCC-------ceEEEeEEeccccccccc-CcceeeEEEEc-----c
Q 007765 194 VESDEFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVH-GATQLMAIQID-----A 259 (590)
Q Consensus 194 v~~~~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~-------~~v~~G~Vs~~~~~~~~~-~~~~~~~i~~~-----~ 259 (590)
++.+. .++++.+.... ..+..+.+.||...... ..+..-+++.-.+..... .......++.. .
T Consensus 90 L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~ 166 (224)
T 3beu_A 90 LAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQE 166 (224)
T ss_dssp ESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSC
T ss_pred eCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCC
Confidence 99874 45677776543 34668999998643210 112222333222211110 01111234432 3
Q ss_pred cccCCCCCceEE-eCC----EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 260 AINPGNSGGPAI-MGN----KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 260 ~i~~G~SGGPl~-~~G----~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
..|.|||||||+ .++ .++||++++.... ...+....+....+++++..
T Consensus 167 ~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 221 (224)
T 3beu_A 167 DTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAA 221 (224)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred cCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 568999999999 542 7999999876522 24566677777777776543
No 95
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.35 E-value=2.7e-11 Score=119.32 Aligned_cols=166 Identities=15% Similarity=0.162 Sum_probs=104.7
Q ss_pred ceEEEEEEeCCeEEEcCcccCC--CcEEEEEEcC-------CCcEEEEEEEEecCC---------CCeEEEEecCC-ccc
Q 007765 140 TTGSGFVIPGKKILTNAHVVAD--STFVLVRKHG-------SPTKYRAQVEAVGHE---------CDLAILIVESD-EFW 200 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~--~~~i~V~~~~-------~~~~~~a~vv~~d~~---------~DlAlLkv~~~-~~~ 200 (590)
..|+|.+|++.+|||+|||+.+ ...+.|.+.. +.+.+..+-+..++. +||||||++.+ .+.
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1m9u_A 27 HSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLG 106 (241)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCC
T ss_pred eeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCccccC
Confidence 5799999999999999999986 4567777631 234555555555544 49999999987 466
Q ss_pred CcceeEEcCCC-C--CCCCeEEEEecCCCCC----CceEEEeEEeccc---ccc-ccc-Cc--ceeeEEEEc-----ccc
Q 007765 201 EGMHFLELGDI-P--FLQQAVAVVGYPQGGD----NISVTKGVVSRVE---PTQ-YVH-GA--TQLMAIQID-----AAI 261 (590)
Q Consensus 201 ~~~~~~~l~~~-~--~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~---~~~-~~~-~~--~~~~~i~~~-----~~i 261 (590)
+.+.|+.|... . ..|+.+++.||..... ...+....+.-+. +.. +.. .. .....++.. ...
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 186 (241)
T 1m9u_A 107 GNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGA 186 (241)
T ss_dssp SSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBC
T ss_pred CCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCee
Confidence 67889888765 2 3589999999864321 1122222222221 111 110 11 111234442 356
Q ss_pred cCCCCCceEE-eCC--EEEEEEee--ec--CC--CCceeEEeehHHHHHHHHH
Q 007765 262 NPGNSGGPAI-MGN--KVAGVAFQ--NL--SG--AENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 262 ~~G~SGGPl~-~~G--~vVGI~~~--~~--~~--~~~~~~aip~~~i~~~l~~ 305 (590)
|.|||||||+ .+| .++||+++ .. .. ....+....+....+++++
T Consensus 187 C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 187 CNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp CTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred ecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 8999999999 646 89999998 32 11 1234666666666666654
No 96
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.35 E-value=4.2e-12 Score=144.59 Aligned_cols=149 Identities=15% Similarity=0.142 Sum_probs=110.1
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE--EEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE--HEFS 415 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~--~~~~ 415 (590)
..|++|..|.+++||+++ |++||+|++|||+++.++.+.. ...++ ...|+.+.|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA--------AVEAL--KEAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHh--hccccccceEEEeccccccccee
Confidence 478999999999999987 9999999999999999986432 11233 24688999999998854 2344
Q ss_pred EEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeecccc
Q 007765 416 ITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDIN 495 (590)
Q Consensus 416 v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a 495 (590)
+++..... .+||.+...... ...+...+++|+.|.++++|
T Consensus 158 v~l~k~~~---------------~lG~~i~~~~~~-------------------------~~~~~~~gv~V~~V~~gs~A 197 (721)
T 2xkx_A 158 IKLIKGPK---------------GLGFSIAGGVGN-------------------------QHIPGDNSIYVTKIIEGGAA 197 (721)
T ss_pred eeeeeecC---------------CCceeeccCCCc-------------------------cccCCCCceEEEEeCCCCch
Confidence 44432100 136654432210 01124578999999999999
Q ss_pred cccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 496 AGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 496 ~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+.+| ++.||+|++|||++|.++ .++.++++.. ++.+.|.+.|+
T Consensus 198 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~ 243 (721)
T 2xkx_A 198 HKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKP 243 (721)
T ss_pred hhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 9999 999999999999999996 5777777654 66888888774
No 97
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.34 E-value=1.3e-11 Score=120.37 Aligned_cols=167 Identities=20% Similarity=0.199 Sum_probs=104.9
Q ss_pred eEEEEEEeCCeEEEcCcccCC--CcEEEEEEcCC-------CcEEEEEEEEec------CCCCeEEEEecCC-cccC-cc
Q 007765 141 TGSGFVIPGKKILTNAHVVAD--STFVLVRKHGS-------PTKYRAQVEAVG------HECDLAILIVESD-EFWE-GM 203 (590)
Q Consensus 141 ~GsGfiI~~g~IlT~aHvv~~--~~~i~V~~~~~-------~~~~~a~vv~~d------~~~DlAlLkv~~~-~~~~-~~ 203 (590)
.|+|.+|++.||||+|||+.+ ...+.|.+... +..+..+.+..+ ..+||||||++.+ .+.+ .+
T Consensus 27 ~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~v 106 (228)
T 3h7o_A 27 TCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKS 106 (228)
T ss_dssp EEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSSS
T ss_pred EeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCccccccccc
Confidence 799999999999999999964 34566665311 112222223222 2479999999987 4555 67
Q ss_pred eeEEcCCCC---CCCCeEEEEecCCCCCC-------ceEEEeEEecccccccccC-cceeeEEEEc---ccccCCCCCce
Q 007765 204 HFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHG-ATQLMAIQID---AAINPGNSGGP 269 (590)
Q Consensus 204 ~~~~l~~~~---~~G~~V~~iG~p~g~~~-------~~v~~G~Vs~~~~~~~~~~-~~~~~~i~~~---~~i~~G~SGGP 269 (590)
.|+.|.... ..|+.+++.||...... ..+...+++.-.+...... ......++.. ...|.||||||
T Consensus 107 ~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgP 186 (228)
T 3h7o_A 107 KPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDP 186 (228)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCE
T ss_pred ccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCc
Confidence 888887653 45899999999653221 1222233332222111111 0111223332 46689999999
Q ss_pred EEeCCEEEEEEeeecCCC-CceeEEeehHHHHHHHHHHH
Q 007765 270 AIMGNKVAGVAFQNLSGA-ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 270 l~~~G~vVGI~~~~~~~~-~~~~~aip~~~i~~~l~~l~ 307 (590)
|+.+++++||+++..... ...+....+...++++++..
T Consensus 187 l~~~~~l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i 225 (228)
T 3h7o_A 187 TVQQDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDII 225 (228)
T ss_dssp EEETTEEEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHH
T ss_pred ceecCeEEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHh
Confidence 998899999999875522 34567777777777777654
No 98
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.34 E-value=1.4e-11 Score=121.12 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=107.8
Q ss_pred CccCCCCCCceEEEEEEeCCeEEEcCcccCC----CcEEEEEEcCC------CcEEEEEEEEecC--------CCCeEEE
Q 007765 131 PWQNKSQRETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHGS------PTKYRAQVEAVGH--------ECDLAIL 192 (590)
Q Consensus 131 p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~----~~~i~V~~~~~------~~~~~a~vv~~d~--------~~DlAlL 192 (590)
||.-.......|+|.+|++.||||+|||+.+ ...+.|.+... ...+..+.+..++ .+|||||
T Consensus 13 Pw~v~l~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl 92 (242)
T 3tvj_B 13 PWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALI 92 (242)
T ss_dssp TTEEEEESSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEE
T ss_pred CCEEEEecCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEE
Confidence 5543333346799999999999999999954 44566765311 1334444444443 4699999
Q ss_pred EecCC-cccCcceeEEcCCCC-----CCCCeEEEEecCCCCC---CceEEEeEEeccc---ccc-cccC-----cceeeE
Q 007765 193 IVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGD---NISVTKGVVSRVE---PTQ-YVHG-----ATQLMA 254 (590)
Q Consensus 193 kv~~~-~~~~~~~~~~l~~~~-----~~G~~V~~iG~p~g~~---~~~v~~G~Vs~~~---~~~-~~~~-----~~~~~~ 254 (590)
|++.+ .+.+.+.|+.|.... ..++.+.+.||..... ........+.-+. +.. +... ......
T Consensus 93 ~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~ 172 (242)
T 3tvj_B 93 KLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANM 172 (242)
T ss_dssp EESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTE
T ss_pred EECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCe
Confidence 99987 566788999997643 3589999999865321 1112222222211 111 1000 011123
Q ss_pred EEEc-----ccccCCCCCceEE-eC---C--EEEEEEeee-cCCC--CceeEEeehHHHHHHHHHHH
Q 007765 255 IQID-----AAINPGNSGGPAI-MG---N--KVAGVAFQN-LSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 255 i~~~-----~~i~~G~SGGPl~-~~---G--~vVGI~~~~-~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
++.. ...|.|||||||+ .+ | .++||++++ .... ...+....+...++++++..
T Consensus 173 ~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 239 (242)
T 3tvj_B 173 LCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239 (242)
T ss_dssp EEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred EEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 4442 4568999999999 43 2 499999987 3321 23466777777777776654
No 99
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.34 E-value=7.2e-11 Score=116.88 Aligned_cols=170 Identities=18% Similarity=0.194 Sum_probs=106.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcCC--------CcEEEEEEEEecC-CCCeEEEEecCC-cccCccee
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGS--------PTKYRAQVEAVGH-ECDLAILIVESD-EFWEGMHF 205 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~~--------~~~~~a~vv~~d~-~~DlAlLkv~~~-~~~~~~~~ 205 (590)
...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+...-+..++ .+||||||++.+ .+.+.+.|
T Consensus 41 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~p 120 (247)
T 1ddj_A 41 MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP 120 (247)
T ss_dssp CEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCCC
T ss_pred CeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEEe
Confidence 357999999999999999999753 3566665311 1234444344444 689999999987 56667888
Q ss_pred EEcCCCC---CCCCeEEEEecCCCCC---C---ceEEEeEEeccccccc--ccCcceeeEEEEc-----ccccCCCCCce
Q 007765 206 LELGDIP---FLQQAVAVVGYPQGGD---N---ISVTKGVVSRVEPTQY--VHGATQLMAIQID-----AAINPGNSGGP 269 (590)
Q Consensus 206 ~~l~~~~---~~G~~V~~iG~p~g~~---~---~~v~~G~Vs~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SGGP 269 (590)
+.|.... ..++.+++.||..... . ..+..-+++...+..+ .........++.. ...|.||||||
T Consensus 121 icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 200 (247)
T 1ddj_A 121 ACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGP 200 (247)
T ss_dssp CBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCE
T ss_pred eecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCc
Confidence 8887543 3478999999864321 0 1222233332222211 1111111234442 35689999999
Q ss_pred EE-eC-C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHH
Q 007765 270 AI-MG-N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 270 l~-~~-G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
|+ .+ | .++||++++.... ...+....+....+++++..+
T Consensus 201 L~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 201 LVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred EEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 99 54 3 6999999876422 234666777777777776553
No 100
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.34 E-value=2e-11 Score=120.12 Aligned_cols=169 Identities=18% Similarity=0.177 Sum_probs=106.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEc--------CCCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKH--------GSPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~--------~~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+. .+.+.+..+-+..++ .+||||||++.+ .+
T Consensus 26 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (238)
T 3bg8_A 26 RHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 105 (238)
T ss_dssp EEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCC
T ss_pred cEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCcccc
Confidence 357999999999999999999754 45667642 123445555555554 469999999987 56
Q ss_pred cCcceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEE---EeEEecccccc-cccCcceeeEEEEc-----ccccC
Q 007765 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVT---KGVVSRVEPTQ-YVHGATQLMAIQID-----AAINP 263 (590)
Q Consensus 200 ~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~---~G~Vs~~~~~~-~~~~~~~~~~i~~~-----~~i~~ 263 (590)
.+.+.|+.|.... ..++.+++.||...... .... .-+++.-.+.. +.........++.. ...|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (238)
T 3bg8_A 106 TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 185 (238)
T ss_dssp BTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCT
T ss_pred CCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcCC
Confidence 6678898887643 35889999998643211 1111 22233222211 11100111234432 35689
Q ss_pred CCCCceEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 264 GNSGGPAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 264 G~SGGPl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
|||||||+ . +| .++||++++.... ...+....+....+++++..
T Consensus 186 GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 186 GDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 99999999 4 55 5999999875421 23566677777777776643
No 101
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.33 E-value=2.6e-11 Score=117.87 Aligned_cols=175 Identities=14% Similarity=0.133 Sum_probs=102.6
Q ss_pred CCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe---CCeEEEcCcccCCC------cEEEEEEcCC-----CcEEEE
Q 007765 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP---GKKILTNAHVVADS------TFVLVRKHGS-----PTKYRA 178 (590)
Q Consensus 113 ~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~---~g~IlT~aHvv~~~------~~i~V~~~~~-----~~~~~a 178 (590)
.+.+++|..... .....|+|.+|+ +.+|||||||+.+. ..+.|..... ...+.+
T Consensus 6 ~p~~g~l~~~~~------------~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v 73 (218)
T 3cp7_A 6 SPHIGKVFFSTN------------QGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAA 73 (218)
T ss_dssp CTTEEEEEEEET------------TEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEE
T ss_pred CceEEEEEEEcC------------CCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEE
Confidence 467788865321 123579999999 99999999999753 3455554211 113444
Q ss_pred EEEEec--------CCCCeEEEEecCC---cccCcce-eEEcCCCCCCCCeEEEEecCCCCC----CceEEEeEEecccc
Q 007765 179 QVEAVG--------HECDLAILIVESD---EFWEGMH-FLELGDIPFLQQAVAVVGYPQGGD----NISVTKGVVSRVEP 242 (590)
Q Consensus 179 ~vv~~d--------~~~DlAlLkv~~~---~~~~~~~-~~~l~~~~~~G~~V~~iG~p~g~~----~~~v~~G~Vs~~~~ 242 (590)
+-+..+ ..+||||||++.+ .+.+.+. ++.|......|+.+.+.||+.... .+........ .
T Consensus 74 ~~~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~~l~~C~~~~~---~ 150 (218)
T 3cp7_A 74 EELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQELHSCHGTAT---N 150 (218)
T ss_dssp EEEEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSSSCEEEEEECE---E
T ss_pred EEEEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCceeeEeeeeEE---c
Confidence 433332 3579999999987 2333455 666654434689999999986421 1111111000 0
Q ss_pred cccccCcceeeEEEEcccccCCCCCceEEeC----CEEEEEEeeecCCCCceeEEee-hHHHHHHHHHHH
Q 007765 243 TQYVHGATQLMAIQIDAAINPGNSGGPAIMG----NKVAGVAFQNLSGAENIGYIIP-VPVIKHFITGVV 307 (590)
Q Consensus 243 ~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~----G~vVGI~~~~~~~~~~~~~aip-~~~i~~~l~~l~ 307 (590)
. ........++ ++.+.|||||||+.+ +.++||++++........+... -+.++.+++...
T Consensus 151 ~--~~~~~~~~~~---Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~~~~~~~p~~~~~~~~l~~~a~ 215 (218)
T 3cp7_A 151 D--PMGSSTQGIP---CNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFLPNVMFGPYFGSGAQQNYNYAS 215 (218)
T ss_dssp C--TTSSSCEEEE---CCCCTTCTTCEEEESSSSSSCEEEECCEEETTEEEEEEECCCCHHHHHHHHHHT
T ss_pred C--CCCCceEEec---CCCCCCCcCCeeEEccCCCeEEEEEEccccCCCCCcEEcCcCCHHHHHHHHHHH
Confidence 0 0001111222 234689999999943 7899999998654333444432 266777776653
No 102
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.33 E-value=1.1e-10 Score=115.37 Aligned_cols=169 Identities=14% Similarity=0.124 Sum_probs=107.2
Q ss_pred ceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcCC--------CcEEEEEEEEec--------CCCCeEEEEecCC---
Q 007765 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGS--------PTKYRAQVEAVG--------HECDLAILIVESD--- 197 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~~--------~~~~~a~vv~~d--------~~~DlAlLkv~~~--- 197 (590)
..|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+ ..+||||||++.+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~~ 102 (248)
T 2r0l_A 23 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 102 (248)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSSSC
T ss_pred ceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcccc
Confidence 57999999999999999999764 4677776311 233444434333 2469999999876
Q ss_pred --cccCcceeEEcCCCC---CCCCeEEEEecCCCCC-----CceEEEeEEecccccccc----cC-cceeeEEEEc----
Q 007765 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-----NISVTKGVVSRVEPTQYV----HG-ATQLMAIQID---- 258 (590)
Q Consensus 198 --~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~-----~~~v~~G~Vs~~~~~~~~----~~-~~~~~~i~~~---- 258 (590)
.+.+.+.|+.|.... ..|+.+++.||..... ...+....+.-+...... .+ ......++..
T Consensus 103 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 182 (248)
T 2r0l_A 103 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDC 182 (248)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSS
T ss_pred cccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCCCC
Confidence 455678899887632 3589999999864321 112233333222211110 00 0111234442
Q ss_pred -ccccCCCCCceEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHH
Q 007765 259 -AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 259 -~~i~~G~SGGPl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
...|.|||||||+ . +| .++||++++.... ...+....+....+++++..+
T Consensus 183 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 239 (248)
T 2r0l_A 183 KSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 239 (248)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC
T ss_pred CCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 3568999999999 4 56 5999999876422 345677778877888877653
No 103
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.33 E-value=6.4e-11 Score=116.70 Aligned_cols=169 Identities=16% Similarity=0.152 Sum_probs=106.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+|||||+++.+ .+
T Consensus 26 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (241)
T 2any_A 26 RHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY 105 (241)
T ss_dssp EEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCC
T ss_pred ceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccC
Confidence 357999999999999999999764 345665421 12234444444444 469999999987 56
Q ss_pred cCcceeEEcCCCC---CCCCeEEEEecCCCCCC-------ceEEEeEEecccccc-cccCcceeeEEEEc-----ccccC
Q 007765 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ-YVHGATQLMAIQID-----AAINP 263 (590)
Q Consensus 200 ~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~-------~~v~~G~Vs~~~~~~-~~~~~~~~~~i~~~-----~~i~~ 263 (590)
.+.+.|+.|.... ..++.+++.||...... ..+..-+++.-.+.. +.........++.. ...|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (241)
T 2any_A 106 TEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACK 185 (241)
T ss_dssp BTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCT
T ss_pred CCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCC
Confidence 6678888887543 45899999998643211 112222333222211 11100111234432 35689
Q ss_pred CCCCceEE-e-CC--EEEEEEeeecCC--CCceeEEeehHHHHHHHHHHH
Q 007765 264 GNSGGPAI-M-GN--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 264 G~SGGPl~-~-~G--~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
|||||||+ . +| .|+||++++... ....+....+...++++.+..
T Consensus 186 GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 235 (241)
T 2any_A 186 GDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235 (241)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 99999999 4 56 699999987542 233566777777777777654
No 104
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.32 E-value=4.9e-11 Score=118.76 Aligned_cols=169 Identities=14% Similarity=0.103 Sum_probs=105.7
Q ss_pred CceEEEEEEeCCeEEEcCcccCC---CcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD---STFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~---~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.||||+|||+.+ ...+.|.+.. +.+.+..+-+..++ .+||||||++.+ .+
T Consensus 23 ~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 102 (261)
T 3gyl_B 23 VHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITF 102 (261)
T ss_dssp EEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCCC
T ss_pred ceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCccC
Confidence 35799999999999999999963 3456676631 12244555455555 359999999987 56
Q ss_pred cCcceeEEcCCCC---CCCCeEEEEecCCCCCC---------ceEEEeEEeccccccccc--------CcceeeEEEEc-
Q 007765 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN---------ISVTKGVVSRVEPTQYVH--------GATQLMAIQID- 258 (590)
Q Consensus 200 ~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~---------~~v~~G~Vs~~~~~~~~~--------~~~~~~~i~~~- 258 (590)
.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+..... ......+++..
T Consensus 103 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~ 182 (261)
T 3gyl_B 103 SRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGY 182 (261)
T ss_dssp BTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESC
T ss_pred CCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCC
Confidence 6678899886543 35899999998643210 122333333222211100 00111234442
Q ss_pred ----ccccCCCCCceEE-e-CC--EEEEEEeeecCC--CCceeEEeehHHHHHHHHHHH
Q 007765 259 ----AAINPGNSGGPAI-M-GN--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 ----~~i~~G~SGGPl~-~-~G--~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+ . +| .++||++++... ....+....+...++++++..
T Consensus 183 ~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 241 (261)
T 3gyl_B 183 VEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV 241 (261)
T ss_dssp SSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHH
Confidence 3568999999999 4 56 599999987542 123566677766666666544
No 105
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.32 E-value=1.3e-10 Score=113.70 Aligned_cols=168 Identities=15% Similarity=0.150 Sum_probs=105.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCcc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~----~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+.. ....+..+-+..++ .+||||||++.+ .|.+.+
T Consensus 23 ~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 102 (232)
T 2oq5_A 23 SHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAV 102 (232)
T ss_dssp EEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSS
T ss_pred CeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCce
Confidence 357999999999999999999753 456676531 23344454444443 469999999987 566678
Q ss_pred eeEEcCCCC---CCCCeEEEEecCCCCC----CceEE---EeEEeccccccc-c-cCcceeeEEEEc-----ccccCCCC
Q 007765 204 HFLELGDIP---FLQQAVAVVGYPQGGD----NISVT---KGVVSRVEPTQY-V-HGATQLMAIQID-----AAINPGNS 266 (590)
Q Consensus 204 ~~~~l~~~~---~~G~~V~~iG~p~g~~----~~~v~---~G~Vs~~~~~~~-~-~~~~~~~~i~~~-----~~i~~G~S 266 (590)
.|+.|.... ..|+.+++.||..... ..... .-+++.-.+... . ........++.. ...|.|||
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 182 (232)
T 2oq5_A 103 HRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDS 182 (232)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCT
T ss_pred eEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCC
Confidence 898887643 3589999999864221 11122 223332222110 0 011111234432 35689999
Q ss_pred CceEE-eCC----EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 267 GGPAI-MGN----KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 267 GGPl~-~~G----~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
||||+ .++ .++||++++.... ...+....+...++++++.
T Consensus 183 GgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 183 GGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp TCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHH
T ss_pred CCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHH
Confidence 99999 543 7999999875422 2346666777777776654
No 106
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.31 E-value=7.9e-11 Score=116.74 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=104.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC---
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD--- 197 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~--- 197 (590)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+|||||+++.+
T Consensus 29 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 29 RFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred CEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 357999999999999999999753 457777631 12345555455554 469999999876
Q ss_pred --cccCcceeEEcCCCC---CCCCeEEEEecCCCCC-----CceEEEe---EEecccccccc--cCcceeeEEEEc----
Q 007765 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-----NISVTKG---VVSRVEPTQYV--HGATQLMAIQID---- 258 (590)
Q Consensus 198 --~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~-----~~~v~~G---~Vs~~~~~~~~--~~~~~~~~i~~~---- 258 (590)
.+.+.+.|+.|.... ..++.+.+.||..... ...+... +++.-.+.... ........++..
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 345578888887543 3478999999864321 0112222 22222221110 011111233332
Q ss_pred -------ccccCCCCCceEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 259 -------AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 259 -------~~i~~G~SGGPl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
...|.|||||||+ . +| .++||++++.... ...+....+...++++++.
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 249 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDN 249 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHHHHHHh
Confidence 3578999999999 4 56 6999999876421 2346667777767766653
No 107
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.31 E-value=4.1e-11 Score=117.59 Aligned_cols=168 Identities=17% Similarity=0.138 Sum_probs=105.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC-ccc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-EFW 200 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~---------~~DlAlLkv~~~-~~~ 200 (590)
...|+|.+|++.+|||+|||+.+...+.|.+.. ..+.+...-+..++ .+||||||++.+ .+.
T Consensus 23 ~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~ 102 (235)
T 2wph_S 23 DAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLN 102 (235)
T ss_dssp TTCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCB
T ss_pred CeeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCC
Confidence 357999999999999999999877777777631 12334444444433 359999999987 456
Q ss_pred CcceeEEcCCCCC-----CCCeEEEEecCCCCC----C--c-eEEEeEEecccccccccCcceeeEEEEc-----ccccC
Q 007765 201 EGMHFLELGDIPF-----LQQAVAVVGYPQGGD----N--I-SVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINP 263 (590)
Q Consensus 201 ~~~~~~~l~~~~~-----~G~~V~~iG~p~g~~----~--~-~v~~G~Vs~~~~~~~~~~~~~~~~i~~~-----~~i~~ 263 (590)
+.+.|+.|..... .+..+++.||..... . + .+..-+++.-.+............++.. ...|.
T Consensus 103 ~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (235)
T 2wph_S 103 SYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQ 182 (235)
T ss_dssp TTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCT
T ss_pred CCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCC
Confidence 6788888876431 378899999864211 0 1 1222233322221111111111234442 35689
Q ss_pred CCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 264 GNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 264 G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
|||||||+ .+| .++||++++.... ...+....+....+++++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 231 (235)
T 2wph_S 183 GDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 (235)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 99999999 466 4999999875422 2356667777777777654
No 108
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.31 E-value=2.3e-11 Score=125.74 Aligned_cols=179 Identities=17% Similarity=0.135 Sum_probs=108.3
Q ss_pred CCCccCCCCCCceEEEEEEeCCeEEEcCcccCC-------CcEEEEEEcCCC-------cEEEEEEEEecC---------
Q 007765 129 GLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD-------STFVLVRKHGSP-------TKYRAQVEAVGH--------- 185 (590)
Q Consensus 129 ~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~-------~~~i~V~~~~~~-------~~~~a~vv~~d~--------- 185 (590)
..||+-.......|.|.+|++.||||||||+.. ...+.|.+.... ..+..+-+..++
T Consensus 100 ~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~ 179 (329)
T 1md8_A 100 NFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYN 179 (329)
T ss_dssp SCTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTC
T ss_pred CCCCeEeeccCCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCC
Confidence 456765443345799999999999999999973 234556653111 122333333332
Q ss_pred -CCCeEEEEecCC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCCC--ceEEEeEEeccc---ccc-ccc----Ccc
Q 007765 186 -ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--ISVTKGVVSRVE---PTQ-YVH----GAT 250 (590)
Q Consensus 186 -~~DlAlLkv~~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~--~~v~~G~Vs~~~---~~~-~~~----~~~ 250 (590)
.+||||||++.+ .|.+.+.|+.|.... ..|..+++.||...... ..+....+.-+. +.. +.. ...
T Consensus 180 ~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~ 259 (329)
T 1md8_A 180 FEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVF 259 (329)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCC
T ss_pred CCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccC
Confidence 359999999987 566788999997654 35889999998643221 112222222221 111 100 001
Q ss_pred eeeEEEEc-----ccccCCCCCceEE-eCC-----EEEEEEeeecCCCCceeEEeehHHHHHHHHHHH
Q 007765 251 QLMAIQID-----AAINPGNSGGPAI-MGN-----KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 251 ~~~~i~~~-----~~i~~G~SGGPl~-~~G-----~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (590)
...+++.. ...|.|||||||+ .++ .++||++++.....+.+....+....+++++..
T Consensus 260 ~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~~~gvyT~V~~y~~WI~~~i 327 (329)
T 1md8_A 260 SQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 327 (329)
T ss_dssp CTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSSSCEEEEEGGGTHHHHHHHH
T ss_pred CCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHH
Confidence 11234442 3568999999999 533 599999997653334567777777777776543
No 109
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.31 E-value=3.1e-11 Score=122.45 Aligned_cols=169 Identities=18% Similarity=0.146 Sum_probs=104.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCC--------CcEEEEEEcCC---------CcEEEEEEEEecC--------CCCeEEEE
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD--------STFVLVRKHGS---------PTKYRAQVEAVGH--------ECDLAILI 193 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~--------~~~i~V~~~~~---------~~~~~a~vv~~d~--------~~DlAlLk 193 (590)
...|.|.+|++.||||||||+.+ ...+.|++... .+.+..+-+..++ .+||||||
T Consensus 55 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~ 134 (289)
T 2bdy_A 55 ELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 134 (289)
T ss_dssp EEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred CEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEEE
Confidence 45799999999999999999952 34567776321 1223343333332 36999999
Q ss_pred ecCC-cccCcceeEEcCCCC------CCCCeEEEEecCCCCCC----------ceEEEeEEeccc---ccccccCcceee
Q 007765 194 VESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGDN----------ISVTKGVVSRVE---PTQYVHGATQLM 253 (590)
Q Consensus 194 v~~~-~~~~~~~~~~l~~~~------~~G~~V~~iG~p~g~~~----------~~v~~G~Vs~~~---~~~~~~~~~~~~ 253 (590)
++.+ .|.+.+.|+.|.... ..|..+.+.||...... ..+....+.-+. +...........
T Consensus 135 L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~~ 214 (289)
T 2bdy_A 135 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 214 (289)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred ECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCCC
Confidence 9987 566678899987542 35889999998642210 112222222111 111111111112
Q ss_pred EEEEc--------ccccCCCCCceEE-eC---C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 254 AIQID--------AAINPGNSGGPAI-MG---N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 254 ~i~~~--------~~i~~G~SGGPl~-~~---G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
+++.. ...|.|||||||+ .+ | .++||++++.... ...+....+....+++++..
T Consensus 215 ~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i 284 (289)
T 2bdy_A 215 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI 284 (289)
T ss_dssp EEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHH
T ss_pred EEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHH
Confidence 34442 3578999999999 43 3 6999999876422 23566777777777777654
No 110
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.30 E-value=5e-11 Score=118.42 Aligned_cols=168 Identities=18% Similarity=0.145 Sum_probs=102.5
Q ss_pred ceEEEEEEeCCeEEEcCcccCC--------CcEEEEEEcCC--------CcE-EEEEEEEecC--------CCCeEEEEe
Q 007765 140 TTGSGFVIPGKKILTNAHVVAD--------STFVLVRKHGS--------PTK-YRAQVEAVGH--------ECDLAILIV 194 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~--------~~~i~V~~~~~--------~~~-~~a~vv~~d~--------~~DlAlLkv 194 (590)
..|+|.+|++.+|||+|||+.+ ...+.|.+... ... ...+-+..++ .+|||||++
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L 105 (259)
T 3rm2_H 26 LLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKL 105 (259)
T ss_dssp EEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEEE
T ss_pred eEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEEe
Confidence 5799999999999999999952 34566766311 112 2233333333 359999999
Q ss_pred cCC-cccCcceeEEcCCCC------CCCCeEEEEecCCCCCC----------ceEEEeEEeccc---ccccccCcceeeE
Q 007765 195 ESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGDN----------ISVTKGVVSRVE---PTQYVHGATQLMA 254 (590)
Q Consensus 195 ~~~-~~~~~~~~~~l~~~~------~~G~~V~~iG~p~g~~~----------~~v~~G~Vs~~~---~~~~~~~~~~~~~ 254 (590)
+.+ .+.+.+.|+.|.... ..|..+.+.||...... .......+.-+. +............
T Consensus 106 ~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 185 (259)
T 3rm2_H 106 KKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNM 185 (259)
T ss_dssp SSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTTE
T ss_pred CCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCce
Confidence 987 566778899887543 34889999998653210 112222222111 1111111111123
Q ss_pred EEEc--------ccccCCCCCceEE-eC---C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 255 IQID--------AAINPGNSGGPAI-MG---N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 255 i~~~--------~~i~~G~SGGPl~-~~---G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
++.. ...|.|||||||+ .+ | .++||++++.... ...+....+...++++++..
T Consensus 186 ~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i 254 (259)
T 3rm2_H 186 FCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI 254 (259)
T ss_dssp EEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHH
T ss_pred EeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 4442 2578999999999 43 2 7999999875422 23466777777777777654
No 111
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.30 E-value=7.9e-11 Score=116.87 Aligned_cols=166 Identities=17% Similarity=0.155 Sum_probs=104.2
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCC---------CcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS---------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~---------~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
..|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+||||||++.+ .+.+.
T Consensus 41 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 120 (251)
T 1pyt_D 41 HTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDT 120 (251)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSS
T ss_pred eEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCC
Confidence 579999999999999999999877788876321 1234444454544 469999999987 56667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEEeE---Eecccccc-cc-cCcceeeEEEEc----ccccCCCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKGV---VSRVEPTQ-YV-HGATQLMAIQID----AAINPGNS 266 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~G~---Vs~~~~~~-~~-~~~~~~~~i~~~----~~i~~G~S 266 (590)
+.|+.|.... ..+..+++.||...... ..+.... ++...+.. +. ........++.. ...|.|||
T Consensus 121 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 200 (251)
T 1pyt_D 121 IQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDS 200 (251)
T ss_dssp CCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSCT
T ss_pred eeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCCC
Confidence 8898887543 34889999998643211 1111222 22111111 10 001111234442 25689999
Q ss_pred CceEE-e-CC--EEEEEEeeecC--CC--CceeEEeehHHHHHHHHH
Q 007765 267 GGPAI-M-GN--KVAGVAFQNLS--GA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 267 GGPl~-~-~G--~vVGI~~~~~~--~~--~~~~~aip~~~i~~~l~~ 305 (590)
||||+ . +| .++||++++.. .. ...+....+....+++++
T Consensus 201 GgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 247 (251)
T 1pyt_D 201 GGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQ 247 (251)
T ss_dssp TCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHH
T ss_pred CCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 99999 4 56 69999998752 11 234566666666666655
No 112
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.30 E-value=1.5e-10 Score=114.08 Aligned_cols=168 Identities=15% Similarity=0.213 Sum_probs=103.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecCC---------CCeEEEEecCC-
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGHE---------CDLAILIVESD- 197 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~~---------~DlAlLkv~~~- 197 (590)
...|+|.+|++.||||||||+.+. ..+.|.+.. ....+..+-+..++. +|||||+++.+
T Consensus 28 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 28 TYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred ceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 357999999999999999999753 346666531 123455554555443 59999999876
Q ss_pred ----cccCcceeEEcCCC---CCCCCeEEEEecCCCCCC-------c-eEEEeEEeccccccc-cc-CcceeeEEEEc--
Q 007765 198 ----EFWEGMHFLELGDI---PFLQQAVAVVGYPQGGDN-------I-SVTKGVVSRVEPTQY-VH-GATQLMAIQID-- 258 (590)
Q Consensus 198 ----~~~~~~~~~~l~~~---~~~G~~V~~iG~p~g~~~-------~-~v~~G~Vs~~~~~~~-~~-~~~~~~~i~~~-- 258 (590)
.+...+.|+.|... ...|+.+.+.||...... + .+..-+++...+... .. .......++..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 34567888888753 245899999998643211 1 112222332222110 00 00111233332
Q ss_pred ---ccccCCCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 259 ---AAINPGNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 259 ---~~i~~G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
...|.|||||||+ .+| .|+||++++.... ...+....+...++++++.
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 244 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHHH
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 3568999999999 355 4999999875422 2346667777777777654
No 113
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.29 E-value=1.6e-10 Score=116.48 Aligned_cols=167 Identities=19% Similarity=0.207 Sum_probs=101.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC------cEEEEEEcC-------------------CCcEEEEEEEEecC--------
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS------TFVLVRKHG-------------------SPTKYRAQVEAVGH-------- 185 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~------~~i~V~~~~-------------------~~~~~~a~vv~~d~-------- 185 (590)
...|.|.+|++.||||||||+.+. ....|++.. ....+..+-+..++
T Consensus 50 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 50 QFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred ceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 357999999999999999999762 356676531 02233344344433
Q ss_pred -CCCeEEEEecCC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCCC---ce---EEEeEEecccccccccC---cce
Q 007765 186 -ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN---IS---VTKGVVSRVEPTQYVHG---ATQ 251 (590)
Q Consensus 186 -~~DlAlLkv~~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~---~~---v~~G~Vs~~~~~~~~~~---~~~ 251 (590)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... .. +..-+++.-.+...... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 479999999987 566678899887543 45899999998643210 11 22222232222111110 011
Q ss_pred eeEEEEc----ccccCCCCCceEE-e--CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHH
Q 007765 252 LMAIQID----AAINPGNSGGPAI-M--GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 252 ~~~i~~~----~~i~~G~SGGPl~-~--~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~ 305 (590)
...++.. ...|.|||||||+ . +| .++||++++.... ...+....+....+++++
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~ 274 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEG 274 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHHT
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHHH
Confidence 1234442 3568999999999 5 23 6999999875422 124556666665555543
No 114
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.29 E-value=2.3e-11 Score=123.08 Aligned_cols=170 Identities=14% Similarity=0.078 Sum_probs=107.1
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCccee
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~-----~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (590)
...++|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .|.+.+.|
T Consensus 76 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~p 155 (283)
T 3f1s_B 76 KDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLP 155 (283)
T ss_dssp CEEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCC
T ss_pred CeeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEe
Confidence 467999999999999999999887778887741 23445555555554 469999999987 56678899
Q ss_pred EEcCCCC------CCCCeEEEEecCCCCCC-----ceEEEeEEecccccccccCcceeeEEEE--cccccCCCCCceEE-
Q 007765 206 LELGDIP------FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVEPTQYVHGATQLMAIQI--DAAINPGNSGGPAI- 271 (590)
Q Consensus 206 ~~l~~~~------~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~--~~~i~~G~SGGPl~- 271 (590)
+.|.... ..|+.+++.||...... ..+...+++.-.+...........++.. ....+.|||||||+
T Consensus 156 icLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDSGgPlv~ 235 (283)
T 3f1s_B 156 VCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVTR 235 (283)
T ss_dssp CBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEEEECSSCGGGBCTTCEEEE
T ss_pred EECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEcccCCCCCCCCCCCCcEEE
Confidence 9997643 34889999998642111 1222223332222111111111122332 22345789999999
Q ss_pred e-CCE--EEEEEeeecCC-CCceeEEeehHHHHHHHHHHHH
Q 007765 272 M-GNK--VAGVAFQNLSG-AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 272 ~-~G~--vVGI~~~~~~~-~~~~~~aip~~~i~~~l~~l~~ 308 (590)
. +|+ |+||+++..-. ....+....+....+++++..+
T Consensus 236 ~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~~ 276 (283)
T 3f1s_B 236 EHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIMN 276 (283)
T ss_dssp ECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHHT
T ss_pred EECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHhh
Confidence 4 565 99999874321 2234566777777777776553
No 115
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.29 E-value=5.7e-11 Score=118.05 Aligned_cols=171 Identities=14% Similarity=0.117 Sum_probs=108.3
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCc---EEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADST---FVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~---~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...|+|.+|++.||||+|||+.+.. .+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 102 (254)
T 2bz6_H 23 AQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL 102 (254)
T ss_dssp EEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCC
T ss_pred CcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccc
Confidence 3579999999999999999998654 37777631 12344554444443 469999999987 56
Q ss_pred cCcceeEEcCCCC------CCCCeEEEEecCCCCCC----ceE---EEeEEecccccccccC-----cceeeEEEEc---
Q 007765 200 WEGMHFLELGDIP------FLQQAVAVVGYPQGGDN----ISV---TKGVVSRVEPTQYVHG-----ATQLMAIQID--- 258 (590)
Q Consensus 200 ~~~~~~~~l~~~~------~~G~~V~~iG~p~g~~~----~~v---~~G~Vs~~~~~~~~~~-----~~~~~~i~~~--- 258 (590)
.+.+.|+.|.... ..++.+++.||...... ... ..-+++...+...... ......++..
T Consensus 103 ~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~ 182 (254)
T 2bz6_H 103 TDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSD 182 (254)
T ss_dssp BTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSS
T ss_pred CCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCC
Confidence 6678899887532 24789999998643210 112 2223332221111000 1111234442
Q ss_pred --ccccCCCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHHc
Q 007765 259 --AAINPGNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVEH 309 (590)
Q Consensus 259 --~~i~~G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~~ 309 (590)
...|.|||||||+ .+| .++||++++.... ...+....+....+++++..+.
T Consensus 183 ~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 241 (254)
T 2bz6_H 183 GSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMRS 241 (254)
T ss_dssp SSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred CCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 3568999999999 456 5999999875422 2356777888888888876643
No 116
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.29 E-value=8e-11 Score=115.38 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=102.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC----cEEEEEEcC---------CCcEEEEEEEEecCC-------CCeEEEEecCC-
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS----TFVLVRKHG---------SPTKYRAQVEAVGHE-------CDLAILIVESD- 197 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~----~~i~V~~~~---------~~~~~~a~vv~~d~~-------~DlAlLkv~~~- 197 (590)
...|+|.+|++.+|||+|||+.+. ..+.|.+.. ....+..+-+..++. +|||||+++.+
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~ 102 (235)
T 4dgj_A 23 RLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKV 102 (235)
T ss_dssp EEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred CeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCcc
Confidence 357999999999999999999642 345666531 122334444555543 69999999976
Q ss_pred cccCcceeEEcCCCC---CCCCeEEEEecCCCCC----C---ceEEEeEEecccccccccC-cceeeEEEEc-----ccc
Q 007765 198 EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD----N---ISVTKGVVSRVEPTQYVHG-ATQLMAIQID-----AAI 261 (590)
Q Consensus 198 ~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~----~---~~v~~G~Vs~~~~~~~~~~-~~~~~~i~~~-----~~i 261 (590)
.+.+.+.|+.|.... ..|+.+.+.||..... . ..+...+++.-.+...... ......++.. ...
T Consensus 103 ~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~ 182 (235)
T 4dgj_A 103 NYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDS 182 (235)
T ss_dssp CCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCBC
T ss_pred ccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCcc
Confidence 566678899987654 3589999999864211 0 1222223332222111111 1111234442 256
Q ss_pred cCCCCCceEE-e-CCE--EEEEEeeecCCC--CceeEEeehHHHHHHHHH
Q 007765 262 NPGNSGGPAI-M-GNK--VAGVAFQNLSGA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 262 ~~G~SGGPl~-~-~G~--vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~ 305 (590)
|.|||||||+ . +|+ ++||++++.... ...+....+....+++++
T Consensus 183 C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 232 (235)
T 4dgj_A 183 CQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQS 232 (235)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHT
T ss_pred CCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHH
Confidence 8999999999 4 453 999999876522 234666666666666654
No 117
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.28 E-value=3.4e-11 Score=118.96 Aligned_cols=167 Identities=19% Similarity=0.157 Sum_probs=104.0
Q ss_pred ceEEEEEEeCCeEEEcCcccCC----CcEEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 140 TTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~----~~~i~V~~~~-----~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
..|+|.+|++.||||+|||+.+ ...+.|.+.. .++.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 106 (245)
T 2f9n_A 27 HFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSR 106 (245)
T ss_dssp EEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCCC
Confidence 5799999999999999999953 2456776531 12344454444554 369999999987 56667
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCCCCCC---------ceEEEeEEecccccc-cccC--------cceeeEEEE---c
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN---------ISVTKGVVSRVEPTQ-YVHG--------ATQLMAIQI---D 258 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~g~~~---------~~v~~G~Vs~~~~~~-~~~~--------~~~~~~i~~---~ 258 (590)
+.|+.|.... ..|+.++++||...... ..+..-+++.-.+.. +... .....+++. .
T Consensus 107 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~~ 186 (245)
T 2f9n_A 107 VHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNSQ 186 (245)
T ss_dssp SCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCSS
T ss_pred ccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCCC
Confidence 8898887543 35899999998643210 111222232211111 1000 011123443 2
Q ss_pred ccccCCCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 259 AAINPGNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 259 ~~i~~G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
...|.|||||||+ .+| .++||++++.... ...+....+....+++++.
T Consensus 187 ~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 240 (245)
T 2f9n_A 187 RDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHY 240 (245)
T ss_dssp SBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred CCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 3568999999999 467 5999999876422 2346667777777777664
No 118
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.28 E-value=2.5e-10 Score=114.79 Aligned_cols=167 Identities=15% Similarity=0.193 Sum_probs=103.8
Q ss_pred ceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC--
Q 007765 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-- 197 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~---------~~DlAlLkv~~~-- 197 (590)
..|+|.+|++.||||||||+.+. ..+.|.+.. ....+..+-+..++ .+|||||+++.+
T Consensus 52 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~ 131 (276)
T 2jde_A 52 YVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 131 (276)
T ss_dssp EEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTS
T ss_pred eeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCccc
Confidence 57999999999999999999753 346666531 12345555454544 359999999876
Q ss_pred ---cccCcceeEEcCCC---CCCCCeEEEEecCCCCCC--------ceEEEeEEeccccccc--ccCcceeeEEEEc---
Q 007765 198 ---EFWEGMHFLELGDI---PFLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQY--VHGATQLMAIQID--- 258 (590)
Q Consensus 198 ---~~~~~~~~~~l~~~---~~~G~~V~~iG~p~g~~~--------~~v~~G~Vs~~~~~~~--~~~~~~~~~i~~~--- 258 (590)
.+...+.|+.|... ...|+.+.+.||...... ..+...+++...+... .........++..
T Consensus 132 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 211 (276)
T 2jde_A 132 RCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQ 211 (276)
T ss_dssp CCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTT
T ss_pred cccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCCC
Confidence 35567888888753 245899999998653211 1122223332222110 0000111234432
Q ss_pred --ccccCCCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 259 --AAINPGNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 259 --~~i~~G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
...|.|||||||+ .+| .|+||++++.... ...+....+....+++++.
T Consensus 212 ~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 267 (276)
T 2jde_A 212 WKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 267 (276)
T ss_dssp SCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHT
T ss_pred CCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 3568999999999 355 4999999875422 2356677777777777654
No 119
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.28 E-value=2.5e-10 Score=115.38 Aligned_cols=168 Identities=14% Similarity=0.124 Sum_probs=105.9
Q ss_pred ceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcCC--------CcEEEEEEEEecC--------CCCeEEEEecCC---
Q 007765 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGS--------PTKYRAQVEAVGH--------ECDLAILIVESD--- 197 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~~--------~~~~~a~vv~~d~--------~~DlAlLkv~~~--- 197 (590)
..|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..++ .+|||||+++.+
T Consensus 58 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~ 137 (283)
T 1yc0_A 58 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137 (283)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTB
T ss_pred cEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccc
Confidence 57999999999999999999764 4677776311 2334444343332 469999999876
Q ss_pred --cccCcceeEEcCCCC---CCCCeEEEEecCCCCC-----CceEEEeEEecccccccc----cC-cceeeEEEEc----
Q 007765 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-----NISVTKGVVSRVEPTQYV----HG-ATQLMAIQID---- 258 (590)
Q Consensus 198 --~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~-----~~~v~~G~Vs~~~~~~~~----~~-~~~~~~i~~~---- 258 (590)
.|.+.+.|+.|.... ..|+.+++.||..... ...+....+.-+...... .+ ......++..
T Consensus 138 ~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~ 217 (283)
T 1yc0_A 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDC 217 (283)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSS
T ss_pred cccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCCCC
Confidence 455678899887632 3589999999864321 112233333322211110 00 0111234442
Q ss_pred -ccccCCCCCceEE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 259 -AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 -~~i~~G~SGGPl~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+ . +| .++||++++.... ...+....+....+++++..
T Consensus 218 ~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i 273 (283)
T 1yc0_A 218 KSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273 (283)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHh
Confidence 3568999999999 4 56 5999999876422 23566777777777777654
No 120
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.27 E-value=2.4e-11 Score=119.68 Aligned_cols=168 Identities=15% Similarity=0.122 Sum_probs=102.9
Q ss_pred ceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC-CCcE---------EEEEEEEecC-------C--CCeEEEEecCC-cc
Q 007765 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-SPTK---------YRAQVEAVGH-------E--CDLAILIVESD-EF 199 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~-~~~~---------~~a~vv~~d~-------~--~DlAlLkv~~~-~~ 199 (590)
..|+|.+|++.+|||+|||+.+...+.|.+.. +-.. +..+-+..++ . +||||||++.+ .+
T Consensus 26 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (240)
T 1fon_A 26 HTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQL 105 (240)
T ss_dssp EEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCC
T ss_pred eEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCcccc
Confidence 57999999999999999999877777776531 1111 1111122332 3 89999999987 45
Q ss_pred cCcceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEE---EeEEeccccccc-ccC-cceeeEEEEc---ccccCC
Q 007765 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVT---KGVVSRVEPTQY-VHG-ATQLMAIQID---AAINPG 264 (590)
Q Consensus 200 ~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~---~G~Vs~~~~~~~-~~~-~~~~~~i~~~---~~i~~G 264 (590)
.+.+.|+.|.... ..|+.+++.||...... ..+. .-+++.-.+... ..+ ......++.. ...|.|
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~G 185 (240)
T 1fon_A 106 GDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNG 185 (240)
T ss_dssp TTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTTS
T ss_pred CCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccCC
Confidence 6678898887643 34888999998643210 1122 222322222110 000 0111234432 356899
Q ss_pred CCCceEE-e--CC--EEEEEEeeec--CC--CCceeEEeehHHHHHHHHHHH
Q 007765 265 NSGGPAI-M--GN--KVAGVAFQNL--SG--AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 265 ~SGGPl~-~--~G--~vVGI~~~~~--~~--~~~~~~aip~~~i~~~l~~l~ 307 (590)
||||||+ . +| .|+||+++.. .. ....+....+....+++++..
T Consensus 186 DsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 237 (240)
T 1fon_A 186 DSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237 (240)
T ss_dssp CTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHH
T ss_pred CCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHH
Confidence 9999999 4 67 8999999865 21 123566677777777776654
No 121
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.26 E-value=4e-11 Score=136.55 Aligned_cols=172 Identities=15% Similarity=0.072 Sum_probs=106.8
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSIT 417 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~ 417 (590)
..|++|..|.++|+|+++ |++||+|++|||++|.++.+.. +..++. ..|+.+.|+|.|+|+.....+.
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~V~R~g~~~~~~~~ 252 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED--------AVAALK--NTYDVVYLKVAKPSNAYLSDSY 252 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcccccCCC
Confidence 479999999999999987 9999999999999999985321 223332 3578999999999876533221
Q ss_pred EecCCC------CCCCcc--------C-----CC-----CCcceeecc-------EEEeeCCHHHHHHhCCCccCCChhh
Q 007765 418 LRLLQP------LVPVHQ--------F-----DK-----LPSYYIFAG-------LVFIPLTQPYLHEYGEDWYNTSPRR 466 (590)
Q Consensus 418 l~~~~~------l~~~~~--------~-----~~-----~p~~~~~~G-------l~~~~l~~~~~~~~g~~~~~~~~~~ 466 (590)
..+... +..... . .. .|......+ .....+... ...+|+.
T Consensus 253 ~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~-~~~lG~~-------- 323 (721)
T 2xkx_A 253 APPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRG-STGLGFN-------- 323 (721)
T ss_pred CCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEEC-CCCccEE--------
Confidence 000000 000000 0 00 000000000 000000000 0011111
Q ss_pred hHHHHHhcCCccCCcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 467 LCERALRELPKKAGEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 467 ~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
........+++|+.|.++++|+.+| ++.||+|++|||++|.+ ++++++++++. ++.+.|.+.|+
T Consensus 324 --------i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~~v~L~v~r~ 390 (721)
T 2xkx_A 324 --------IVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQTVTIIAQYK 390 (721)
T ss_pred --------EeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEeC
Confidence 0011124689999999999999999 99999999999999987 89999999875 66788887764
No 122
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.26 E-value=2.6e-10 Score=115.73 Aligned_cols=168 Identities=14% Similarity=0.086 Sum_probs=104.0
Q ss_pred ceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC-------------CCcEEEEEEEEecC-------CCCeEEEEecC
Q 007765 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG-------------SPTKYRAQVEAVGH-------ECDLAILIVES 196 (590)
Q Consensus 140 ~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~-------------~~~~~~a~vv~~d~-------~~DlAlLkv~~ 196 (590)
..|.|.+|++.||||||||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.
T Consensus 30 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~ 109 (290)
T 1fiw_A 30 HVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITP 109 (290)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEES
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEECC
Confidence 56999999999999999999753 346666521 11234444444443 46999999998
Q ss_pred C-cccCcceeEEcCCCC----CCCCeEEEEecCCCCC-----C---ceEEEeEEeccccccc--ccCcceeeEEEEc---
Q 007765 197 D-EFWEGMHFLELGDIP----FLQQAVAVVGYPQGGD-----N---ISVTKGVVSRVEPTQY--VHGATQLMAIQID--- 258 (590)
Q Consensus 197 ~-~~~~~~~~~~l~~~~----~~G~~V~~iG~p~g~~-----~---~~v~~G~Vs~~~~~~~--~~~~~~~~~i~~~--- 258 (590)
+ .|.+.+.|+.|.... ..|+.+++.||..... . ..+..-+++.-.+... .........++..
T Consensus 110 ~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~~ 189 (290)
T 1fiw_A 110 PVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPE 189 (290)
T ss_dssp CCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTT
T ss_pred ccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecCC
Confidence 7 566778898887532 3488999999864321 0 1122223332222110 0111111234432
Q ss_pred --ccccCCCCCceEE-eCC-----EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHH
Q 007765 259 --AAINPGNSGGPAI-MGN-----KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 259 --~~i~~G~SGGPl~-~~G-----~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
...|.|||||||+ .+. .++||++++.... ...+....+....+++++..
T Consensus 190 ~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 248 (290)
T 1fiw_A 190 GKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248 (290)
T ss_dssp CSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHHH
T ss_pred CCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 2578999999999 542 6999999875422 23456666677777776654
No 123
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.25 E-value=6.4e-11 Score=123.20 Aligned_cols=179 Identities=16% Similarity=0.140 Sum_probs=110.1
Q ss_pred CCCCccCC--CCCCceEEEEEEeCCeEEEcCcccCCCc-----------EEEEEEcCCCcEEEEEEEEecC---CCCeEE
Q 007765 128 YGLPWQNK--SQRETTGSGFVIPGKKILTNAHVVADST-----------FVLVRKHGSPTKYRAQVEAVGH---ECDLAI 191 (590)
Q Consensus 128 ~~~p~~~~--~~~~~~GsGfiI~~g~IlT~aHvv~~~~-----------~i~V~~~~~~~~~~a~vv~~d~---~~DlAl 191 (590)
...||+-. ......+.|.+|++.||||||||+.... ...+... ..+.+..+-+..+| .+||||
T Consensus 112 g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~i~~HP~y~~nDIAL 190 (347)
T 4f4o_C 112 GSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVG-KKQEVEIEKVIFHPDNSTVDIGL 190 (347)
T ss_dssp CCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEET-TTEEECEEEEEECSCTTTCCCEE
T ss_pred CCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecCC-CeEEEEEEEEEECcCCCCCCEEE
Confidence 34577642 2234579999999999999999996421 2233332 44556666566665 469999
Q ss_pred EEecCC-cccCcceeEEcCCCC--CCCCeEEEEecCCCCCC------ceEEEeEEecccccc-ccc--------------
Q 007765 192 LIVESD-EFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQ-YVH-------------- 247 (590)
Q Consensus 192 Lkv~~~-~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~~------~~v~~G~Vs~~~~~~-~~~-------------- 247 (590)
||++.+ .|.+.+.|+.|.... ..|..+++.||...... ..+..-+++.-.+.. +..
T Consensus 191 lkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~ 270 (347)
T 4f4o_C 191 IKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVG 270 (347)
T ss_dssp EEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSS
T ss_pred EEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhcccccccccccccccc
Confidence 999987 567789999997544 45889999998643211 122333333222111 000
Q ss_pred --CcceeeEEEEc-----ccccCCCCCceEE-eC---C--EEEEEEeeecCC-CCceeEEeehHHHHHHHHHHH
Q 007765 248 --GATQLMAIQID-----AAINPGNSGGPAI-MG---N--KVAGVAFQNLSG-AENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 248 --~~~~~~~i~~~-----~~i~~G~SGGPl~-~~---G--~vVGI~~~~~~~-~~~~~~aip~~~i~~~l~~l~ 307 (590)
......++... ...|.|||||||+ .+ | .++||+|++... ....+...-+....+++++..
T Consensus 271 ~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~WI~~~i 344 (347)
T 4f4o_C 271 VQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDWIQTTI 344 (347)
T ss_dssp SCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHHHHHHH
T ss_pred ccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 00011234431 2468999999998 32 3 399999987652 223566666777777776654
No 124
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.24 E-value=8.2e-11 Score=124.87 Aligned_cols=180 Identities=18% Similarity=0.129 Sum_probs=108.6
Q ss_pred CCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCC-------cEEEEEEcCC-------CcEEEEEEEEecC-------
Q 007765 127 NYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS-------TFVLVRKHGS-------PTKYRAQVEAVGH------- 185 (590)
Q Consensus 127 ~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~-------~~i~V~~~~~-------~~~~~a~vv~~d~------- 185 (590)
....||+-.......|.|.+|++.||||||||+.+. ..+.|.+... ...+..+-+..++
T Consensus 166 ~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 245 (399)
T 1gpz_A 166 MGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDES 245 (399)
T ss_dssp TTSSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSS
T ss_pred CCCCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCC
Confidence 344588765544557999999999999999999743 2356665311 1123333333333
Q ss_pred ---CCCeEEEEecCC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCCC-----ceEEEeEEecccccc-ccc----C
Q 007765 186 ---ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVEPTQ-YVH----G 248 (590)
Q Consensus 186 ---~~DlAlLkv~~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~~~~-~~~----~ 248 (590)
.+||||||++.+ .|.+.+.|+.|.... ..|..+++.||...... ..+..-+++.-.+.. +.. .
T Consensus 246 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~ 325 (399)
T 1gpz_A 246 YNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMD 325 (399)
T ss_dssp SCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC---------
T ss_pred CCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccC
Confidence 359999999987 566789999997654 35888999998643210 122223333222211 100 0
Q ss_pred cceeeEEEEc-----ccccCCCCCceEE-eC---C--EEEEEEeeecCCCCceeEEeehHHHHHHHHHH
Q 007765 249 ATQLMAIQID-----AAINPGNSGGPAI-MG---N--KVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 249 ~~~~~~i~~~-----~~i~~G~SGGPl~-~~---G--~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l 306 (590)
.....++... ...|.|||||||+ .+ | .|+||++++.....+.+....+....+++++.
T Consensus 326 ~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~~ 394 (399)
T 1gpz_A 326 VFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKE 394 (399)
T ss_dssp --CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHHH
T ss_pred cCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHHH
Confidence 0011234432 3568999999999 43 3 59999998765333456777777767776654
No 125
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.23 E-value=1.9e-10 Score=120.85 Aligned_cols=170 Identities=15% Similarity=0.133 Sum_probs=106.6
Q ss_pred CceEEEEEEeCCeEEEcCcccCC----CcEEEEEEcC------CCcEEEEEEEEecC-------------CCCeEEEEec
Q 007765 139 ETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG------SPTKYRAQVEAVGH-------------ECDLAILIVE 195 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~----~~~i~V~~~~------~~~~~~a~vv~~d~-------------~~DlAlLkv~ 195 (590)
...|.|.+|++.||||||||+.. ...+.|.+.. .+..+..+-+..++ .+||||||++
T Consensus 140 ~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~ 219 (372)
T 1z8g_A 140 AHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLS 219 (372)
T ss_dssp EEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEES
T ss_pred ceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEEC
Confidence 35799999999999999999942 2456776531 12244444444443 3599999999
Q ss_pred CC-cccCcceeEEcCCCC---CCCCeEEEEecCCCCC----C---ceEEEeEEeccccccc--ccCcceeeEEEEc----
Q 007765 196 SD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD----N---ISVTKGVVSRVEPTQY--VHGATQLMAIQID---- 258 (590)
Q Consensus 196 ~~-~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~----~---~~v~~G~Vs~~~~~~~--~~~~~~~~~i~~~---- 258 (590)
.+ .|.+.+.|+.|.... ..|+.+++.||..... . ..+..-+++.-.+... ........+++..
T Consensus 220 ~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~ 299 (372)
T 1z8g_A 220 SPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEG 299 (372)
T ss_dssp SCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTC
T ss_pred CCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCCC
Confidence 87 566778999887543 3489999999864321 0 1122233332222110 1111111245542
Q ss_pred -ccccCCCCCceEE-eC-----C--EEEEEEeeecCC--CCceeEEeehHHHHHHHHHHHH
Q 007765 259 -AAINPGNSGGPAI-MG-----N--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 259 -~~i~~G~SGGPl~-~~-----G--~vVGI~~~~~~~--~~~~~~aip~~~i~~~l~~l~~ 308 (590)
...|.|||||||+ .+ | .|+||++++... ....+....+....+++++..+
T Consensus 300 ~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI~~~i~ 360 (372)
T 1z8g_A 300 GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 360 (372)
T ss_dssp SCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 2468999999999 54 3 699999997642 2235677777777777776553
No 126
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.22 E-value=1.5e-10 Score=118.99 Aligned_cols=168 Identities=14% Similarity=0.075 Sum_probs=105.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCccee
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~-----~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (590)
...++|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .|.+.+.|
T Consensus 117 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~p 196 (317)
T 3h5c_B 117 KDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLP 196 (317)
T ss_dssp CEEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCC
T ss_pred ceeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccc
Confidence 457999999999999999999877777777631 23445555555554 469999999987 56667889
Q ss_pred EEcCCCC------CCCCeEEEEecCCCCCC-----ceEEEeEEecccccccccCcceeeEEEE--cccccCCCCCceEE-
Q 007765 206 LELGDIP------FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVEPTQYVHGATQLMAIQI--DAAINPGNSGGPAI- 271 (590)
Q Consensus 206 ~~l~~~~------~~G~~V~~iG~p~g~~~-----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~--~~~i~~G~SGGPl~- 271 (590)
+.|.... ..|+.+++.||...... ..+..-+++.-.............++.. ....+.|||||||+
T Consensus 197 icLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~~ 276 (317)
T 3h5c_B 197 VCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVTR 276 (317)
T ss_dssp CBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECSCCCCCCCTTCEEEE
T ss_pred eeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCCCCCcCCCCCCCEEE
Confidence 9887642 35889999998542110 1223333332221111111111112332 23356899999999
Q ss_pred -eCCE--EEEEEeeecCC-CCceeEEeehHHHHHHHHHH
Q 007765 272 -MGNK--VAGVAFQNLSG-AENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 272 -~~G~--vVGI~~~~~~~-~~~~~~aip~~~i~~~l~~l 306 (590)
.+|+ |+||+++..-. ....+....+....+++++.
T Consensus 277 ~~~~~~~l~Gi~S~g~~~~~~~p~vyt~V~~y~~WI~~~ 315 (317)
T 3h5c_B 277 EHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQI 315 (317)
T ss_dssp EETTEEEEEEEECCCCSSCCTTEEEEEEGGGCHHHHHHH
T ss_pred ecCCEEEEEEEEEECCCCCCCcceEEEEhHHhHHHHHHH
Confidence 4665 99999875322 22345667777666666654
No 127
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.21 E-value=1.5e-10 Score=119.93 Aligned_cols=177 Identities=16% Similarity=0.128 Sum_probs=105.2
Q ss_pred CCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC------CCcEEEE---EEEEec--------------CC
Q 007765 130 LPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTKYRA---QVEAVG--------------HE 186 (590)
Q Consensus 130 ~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~------~~~~~~a---~vv~~d--------------~~ 186 (590)
.||+-... ...|.|.+|++.||||||||+.+.....|.+.. +...+.. +-+..+ ..
T Consensus 94 ~Pw~v~l~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~ 172 (333)
T 1elv_A 94 FPWQVFFD-NPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFD 172 (333)
T ss_dssp STTEEEEE-TTEEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCT
T ss_pred cCeEEEec-CCceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCc
Confidence 35654432 237999999999999999999865444454321 1112222 223222 24
Q ss_pred CCeEEEEecCC-cccCcceeEEcCCCC-----CCCCeEEEEecCCCCCC------ceEEEeEEecccccc-cccC-----
Q 007765 187 CDLAILIVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQ-YVHG----- 248 (590)
Q Consensus 187 ~DlAlLkv~~~-~~~~~~~~~~l~~~~-----~~G~~V~~iG~p~g~~~------~~v~~G~Vs~~~~~~-~~~~----- 248 (590)
+||||||++.+ .|.+.+.|+.|.... ..|+.+++.||...... ..+..-+++...+.. +...
T Consensus 173 nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~ 252 (333)
T 1elv_A 173 NDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADA 252 (333)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC---------
T ss_pred ceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhccccccc
Confidence 69999999987 566788999987543 23889999998643211 112222333211111 1000
Q ss_pred ---cceeeEEEEc----ccccCCCCCceEE-eC---C---EEEEEEeeecCCCCceeEEeehHHHHHHHHHHHH
Q 007765 249 ---ATQLMAIQID----AAINPGNSGGPAI-MG---N---KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 249 ---~~~~~~i~~~----~~i~~G~SGGPl~-~~---G---~vVGI~~~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (590)
.....+++.. ...|.|||||||+ .+ | .++||++++..... .+....+.....++++..+
T Consensus 253 ~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~~-~~vyt~V~~y~~WI~~~~~ 325 (333)
T 1elv_A 253 EAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGT-YGLYTRVKNYVDWIMKTMQ 325 (333)
T ss_dssp -CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTTS-EEEEEEGGGGHHHHHHHHH
T ss_pred ccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCCC-CcEEeEHHHHHHHHHHHHh
Confidence 0111234432 3568999999999 53 3 49999999765332 5777777777777776553
No 128
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.21 E-value=1.2e-10 Score=109.64 Aligned_cols=164 Identities=16% Similarity=0.115 Sum_probs=107.2
Q ss_pred hCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe---CCeEEEcCcccCCCcEEEEEEcCCCcEEE-----EEEEEe
Q 007765 112 ALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP---GKKILTNAHVVADSTFVLVRKHGSPTKYR-----AQVEAV 183 (590)
Q Consensus 112 ~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~---~g~IlT~aHvv~~~~~i~V~~~~~~~~~~-----a~vv~~ 183 (590)
...+||.|... . ...|+|+.+. .++||||+||+.+... .+....++..++ ......
T Consensus 14 ~P~svv~l~~~--------------d-~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~-~~~~~k~g~~ip~~~~~~~~~~~ 77 (191)
T 1zyo_A 14 EPASLVAIKSG--------------P-TTIGFGCRTKIDGEDCLLTAHHVWCNSMR-PTGLAKAGKQVSVEDWEISMSSS 77 (191)
T ss_dssp SCSSEEEEEET--------------T-EEEEEEEEEEC--CEEEEECHHHHTSSSC-CCEEEETTEEEECCSCEEEEEEC
T ss_pred CCCeEEEEEeC--------------C-eEEEEEEEEEECCCcEEEEChhhCcCCcc-eeeecCCCCEEEcccceeeEccC
Confidence 34678888762 1 4679999996 4599999999987531 122222444443 344456
Q ss_pred cCCCCeEEEEecCCccc-CcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEccccc
Q 007765 184 GHECDLAILIVESDEFW-EGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAIN 262 (590)
Q Consensus 184 d~~~DlAlLkv~~~~~~-~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~ 262 (590)
|+..|+||++++..... =.++++.|... ..++.|.++|++.... +....|+....+. . ..+++.+...
T Consensus 78 d~~~D~all~vp~~~~s~lg~~~a~~~~~-~~~~~vt~yg~~~~~~-~~s~~g~~~~~~~------~---~~~~~~~~T~ 146 (191)
T 1zyo_A 78 DKMLDFAIVRVPTHVWSKLGVKSTPLVCP-SSKDVITCYGGSSSDC-LMSGVGSSSTSEF------T---WKLTHTCPTA 146 (191)
T ss_dssp CTTTCEEEEECCHHHHHHHTCCCCCBCCC-CSCEEEEEEEESSTTS-EEEEEEEEEECSS------T---TEEEECCCCC
T ss_pred CCCCcEEEEEcCCChhhhcCcceeEeecC-CCCccEEEEeecCCCC-EeecccceeeccC------C---cEEEEEcCCC
Confidence 78899999999864210 02445445322 2488999999987544 3444553321110 0 2477888889
Q ss_pred CCCCCceEEeCCEEEEEEeeecCCCCceeEEeehHHHHHHH
Q 007765 263 PGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFI 303 (590)
Q Consensus 263 ~G~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~~~i~~~l 303 (590)
+|+||+|+|..+.||||+.... ...+.+.++-+..++++|
T Consensus 147 ~G~SGsP~~ng~~IVGvh~G~~-~~~~~N~a~n~~~~~~~~ 186 (191)
T 1zyo_A 147 AGWSGTPLYSSRGVVGMHVGFE-EIGKLNRGVNMFYVANYL 186 (191)
T ss_dssp TTCTTCEEECSSCEEEEEEEEE-ETTTEEEEECHHHHHHHT
T ss_pred CCCCCCcEEcCCeEEEEEeCcc-cCCceeeeeehHHHhhhh
Confidence 9999999995568899998743 346688898888887763
No 129
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.20 E-value=1.7e-10 Score=122.69 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=110.8
Q ss_pred CCCccCCCCCCceEEEEEEeCCeEEEcCcccCC----CcEEEEEEcC------CCcEEEEEEEEecC--------CCCeE
Q 007765 129 GLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG------SPTKYRAQVEAVGH--------ECDLA 190 (590)
Q Consensus 129 ~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~----~~~i~V~~~~------~~~~~~a~vv~~d~--------~~DlA 190 (590)
..||+-.......+.|.+|++.||||||||+.+ ...+.|.+.. ..+.+..+-+..++ .+|||
T Consensus 172 ~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIA 251 (403)
T 1zjk_A 172 DFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIA 251 (403)
T ss_dssp SSTTEEEEEESCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCE
T ss_pred CcCCEeEeccCCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEE
Confidence 346665443335699999999999999999975 3567777632 12344444444443 46999
Q ss_pred EEEecCC-cccCcceeEEcCCCC-----CCCCeEEEEecCCCCCC------ceEEEeEEecccccc-cccC-----ccee
Q 007765 191 ILIVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQ-YVHG-----ATQL 252 (590)
Q Consensus 191 lLkv~~~-~~~~~~~~~~l~~~~-----~~G~~V~~iG~p~g~~~------~~v~~G~Vs~~~~~~-~~~~-----~~~~ 252 (590)
|||++.+ .|.+.+.|+.|.... ..|+.+++.||...... ..+..-+++.-.+.. +... ....
T Consensus 252 Ll~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~ 331 (403)
T 1zjk_A 252 LIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTA 331 (403)
T ss_dssp EEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCT
T ss_pred EEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCC
Confidence 9999987 566789999997643 34889999998653210 112222333222111 1100 1111
Q ss_pred eEEEEc-----ccccCCCCCceEE-eC---C--EEEEEEeee-cCCC--CceeEEeehHHHHHHHHHHH
Q 007765 253 MAIQID-----AAINPGNSGGPAI-MG---N--KVAGVAFQN-LSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 253 ~~i~~~-----~~i~~G~SGGPl~-~~---G--~vVGI~~~~-~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
.++... ...|.|||||||+ .+ | .|+||++++ .... ...+....+....+++++..
T Consensus 332 ~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 400 (403)
T 1zjk_A 332 NMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 400 (403)
T ss_dssp TEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHH
T ss_pred CeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 234442 3568999999999 53 3 599999987 3321 23566777777777777654
No 130
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.19 E-value=5.4e-11 Score=101.78 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHcCccccccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC
Q 007765 296 VPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN 374 (590)
Q Consensus 296 ~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~ 374 (590)
.+.++++.+++.+++... ++++|+...... ....|++|..+.|+|||+++ |++||+|++|||++|.+
T Consensus 4 ~~~~~~~~~~l~~~~~~~-~~~~g~~~~~~~-----------~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~ 71 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEI-FQYVRLSQVKRD-----------DKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD 71 (105)
T ss_dssp HHHHHHHHHHHHHSGGGH-HHHEEEEEEEET-----------TEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTS
T ss_pred hHHHHHHHHHHHHCHHHH-HhhceeEEEecC-----------CcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCC
Confidence 357788899999998887 888888754320 11247778888888899999 99999999999999999
Q ss_pred CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEE
Q 007765 375 DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITL 418 (590)
Q Consensus 375 ~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l 418 (590)
|.++. .++.....|+.+.|+|.|+|+..++.+++
T Consensus 72 ~~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 72 PNVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TTHHH----------HHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred HHHHH----------HHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 98753 56655567899999999999988877653
No 131
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.18 E-value=3.3e-11 Score=101.14 Aligned_cols=86 Identities=19% Similarity=0.115 Sum_probs=69.5
Q ss_pred eEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC--EEEEEEEEEe
Q 007765 343 VLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG--KEHEFSITLR 419 (590)
Q Consensus 343 v~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g--~~~~~~v~l~ 419 (590)
.+|..|.++|||+++ |++||+|++|||++|.+|.++. ..+.....++.+.++|.|+| ..+++++++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~----------~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVR----------LQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHH----------HHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 368899999999999 9999999999999999998764 45545555689999999987 5678888888
Q ss_pred cCCCCCCCccCCCCCcceeeccEEE
Q 007765 420 LLQPLVPVHQFDKLPSYYIFAGLVF 444 (590)
Q Consensus 420 ~~~~l~~~~~~~~~p~~~~~~Gl~~ 444 (590)
.|.. .+..++++..+||.+
T Consensus 74 ~~~~------~~~~~~~l~~lGl~p 92 (95)
T 3id1_A 74 HWAF------EPDKEDPVSSLGIRP 92 (95)
T ss_dssp TCCC------CTTTSCHHHHTTEEE
T ss_pred cccc------CCCCCCHHHHcCccC
Confidence 8754 334567777888864
No 132
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.17 E-value=1.5e-09 Score=109.00 Aligned_cols=186 Identities=14% Similarity=0.182 Sum_probs=108.8
Q ss_pred CCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEE
Q 007765 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVE 181 (590)
Q Consensus 113 ~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv 181 (590)
.|-+|.|...... ......|.|.+|++.||||||||+.+. ..+.|.+.. .+..+..+.+
T Consensus 35 ~Pw~v~l~~~~~~----------~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 35 QPWFAAIYRRHRG----------GSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp STTEEEEEEECSS----------SCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCcEEEEEEecCC----------CcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 4677777653321 112346999999999999999999753 345555421 1234555545
Q ss_pred EecC---------CCCeEEEEecCC-----cccCcceeEEcCCCC---CCCCeEEEEecCCCCCC-------c-eEEEeE
Q 007765 182 AVGH---------ECDLAILIVESD-----EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------I-SVTKGV 236 (590)
Q Consensus 182 ~~d~---------~~DlAlLkv~~~-----~~~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~-------~-~v~~G~ 236 (590)
..++ ..|||||+++.+ .+...+.|+.|.... ..|..+.+.|+...... + .+..-+
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 4443 369999999754 245567888886543 44888899887643211 1 122223
Q ss_pred Eecccccc-cccC-cceeeEEEE-----cccccCCCCCceEE--eCCE--EEEEEeeecCCC--CceeEEeehHHHHHHH
Q 007765 237 VSRVEPTQ-YVHG-ATQLMAIQI-----DAAINPGNSGGPAI--MGNK--VAGVAFQNLSGA--ENIGYIIPVPVIKHFI 303 (590)
Q Consensus 237 Vs~~~~~~-~~~~-~~~~~~i~~-----~~~i~~G~SGGPl~--~~G~--vVGI~~~~~~~~--~~~~~aip~~~i~~~l 303 (590)
+..-.+.. +... ......+.. ....|.|||||||+ .+|+ |+||++++.... ...+...-+...++++
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI 264 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWI 264 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHH
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHH
Confidence 33222111 1100 000011221 12468999999999 4554 999999876522 2235666777777777
Q ss_pred HHHHH
Q 007765 304 TGVVE 308 (590)
Q Consensus 304 ~~l~~ 308 (590)
++..+
T Consensus 265 ~~~~~ 269 (276)
T 2vnt_A 265 RSHTK 269 (276)
T ss_dssp HHHHS
T ss_pred HHHhh
Confidence 76553
No 133
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.16 E-value=4.5e-10 Score=118.77 Aligned_cols=171 Identities=15% Similarity=0.170 Sum_probs=107.2
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC----cEEEEEEcC-----C-----CcEEEEEEEEecC-------CCCeEEEEecCC
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS----TFVLVRKHG-----S-----PTKYRAQVEAVGH-------ECDLAILIVESD 197 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~----~~i~V~~~~-----~-----~~~~~a~vv~~d~-------~~DlAlLkv~~~ 197 (590)
...|.|.+|++.||||||||+.+. ..+.|++.. + .+.+..+-+..++ .+||||||++.+
T Consensus 161 ~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~p 240 (394)
T 2b9l_A 161 QLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDRP 240 (394)
T ss_dssp SEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSC
T ss_pred ceEeeEEEEeCCEEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecCc
Confidence 467999999999999999999753 457777631 0 1334454455554 369999999987
Q ss_pred -cccCcceeEEcCCCC--CCCCeEEEEecCCCCC-------C--ceEEEeEEecccccc-ccc---C---cceeeEEEEc
Q 007765 198 -EFWEGMHFLELGDIP--FLQQAVAVVGYPQGGD-------N--ISVTKGVVSRVEPTQ-YVH---G---ATQLMAIQID 258 (590)
Q Consensus 198 -~~~~~~~~~~l~~~~--~~G~~V~~iG~p~g~~-------~--~~v~~G~Vs~~~~~~-~~~---~---~~~~~~i~~~ 258 (590)
.+.+.+.|+.|.... ..++.+++.||..... . ..+..-+++.-.+.. +.. + .....++...
T Consensus 241 v~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg 320 (394)
T 2b9l_A 241 LVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAG 320 (394)
T ss_dssp CBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEEC
T ss_pred cccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEee
Confidence 566678999987643 3478899999864211 0 122223333222211 100 0 0011234432
Q ss_pred ----ccccCCCCCceEE-eC----C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHHc
Q 007765 259 ----AAINPGNSGGPAI-MG----N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVEH 309 (590)
Q Consensus 259 ----~~i~~G~SGGPl~-~~----G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~~ 309 (590)
...|.|||||||+ .. | .++||++++.... ...+...-+...++++++..+.
T Consensus 321 ~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVYT~V~~y~~WI~~~i~~ 384 (394)
T 2b9l_A 321 GEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVYANVAHFRNWIDQEMQA 384 (394)
T ss_dssp CBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHHh
Confidence 3568999999999 41 3 5999999876422 2346667777777777765543
No 134
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.14 E-value=9.8e-10 Score=116.75 Aligned_cols=170 Identities=18% Similarity=0.185 Sum_probs=104.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcCC--------------------CcEEEEEEEEecC-------CCCe
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHGS--------------------PTKYRAQVEAVGH-------ECDL 189 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~~--------------------~~~~~a~vv~~d~-------~~Dl 189 (590)
...|.|.+|++.||||||||+.+. ..+.|++... .+.+..+-+..++ .+||
T Consensus 145 ~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 145 RFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred eEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 457999999999999999999853 4677776310 1223333344443 4699
Q ss_pred EEEEecCC-cccCcceeEEcCCCC------CCCCeEEEEecCCCCC---C---ceEEEeEEecccccccccCcceeeEEE
Q 007765 190 AILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGD---N---ISVTKGVVSRVEPTQYVHGATQLMAIQ 256 (590)
Q Consensus 190 AlLkv~~~-~~~~~~~~~~l~~~~------~~G~~V~~iG~p~g~~---~---~~v~~G~Vs~~~~~~~~~~~~~~~~i~ 256 (590)
||||++.+ .|.+.+.|+.|.... ..+..+++.||..... . ..+..-+++.-.+............+.
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~iC 304 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVPLSQLC 304 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSCCCTTEEE
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcccCCCceEe
Confidence 99999987 566788999987542 3588999999864321 1 112222333222211111101112344
Q ss_pred Ec----ccccCCCCCceE------E-e-CC--EEEEEEeeec-CCC--CceeEEeehHHHHHHHHHHHH
Q 007765 257 ID----AAINPGNSGGPA------I-M-GN--KVAGVAFQNL-SGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 257 ~~----~~i~~G~SGGPl------~-~-~G--~vVGI~~~~~-~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
.. ...|.||||||| + . +| .++||++++. ... ...+....+....+|+++..+
T Consensus 305 Ag~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~ 373 (408)
T 2xxl_A 305 VGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMA 373 (408)
T ss_dssp ECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHH
T ss_pred ecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 32 356899999999 5 2 34 6999999973 321 224666777777777776543
No 135
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.12 E-value=1.2e-10 Score=124.50 Aligned_cols=180 Identities=19% Similarity=0.154 Sum_probs=106.8
Q ss_pred CCCCccCCC----CCCceEEEEEEeCCeEEEcCcccC--------CCcEEEEEEcCC---------CcEEEEEEEEecC-
Q 007765 128 YGLPWQNKS----QRETTGSGFVIPGKKILTNAHVVA--------DSTFVLVRKHGS---------PTKYRAQVEAVGH- 185 (590)
Q Consensus 128 ~~~p~~~~~----~~~~~GsGfiI~~g~IlT~aHvv~--------~~~~i~V~~~~~---------~~~~~a~vv~~d~- 185 (590)
...||+-.. .....|.|.+|++.||||||||+. ....+.|++... .+.+..+-+..++
T Consensus 175 g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~ 254 (424)
T 3nxp_A 175 GMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPR 254 (424)
T ss_dssp TSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTT
T ss_pred CCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCC
Confidence 345776432 134579999999999999999995 234577776311 1122333333333
Q ss_pred -------CCCeEEEEecCC-cccCcceeEEcCCCC------CCCCeEEEEecCCC---------CC-CceEEEeEEeccc
Q 007765 186 -------ECDLAILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQG---------GD-NISVTKGVVSRVE 241 (590)
Q Consensus 186 -------~~DlAlLkv~~~-~~~~~~~~~~l~~~~------~~G~~V~~iG~p~g---------~~-~~~v~~G~Vs~~~ 241 (590)
.+||||||++.+ .|.+.+.|+.|.... ..|..+.+.||... .. ...+....+.-+.
T Consensus 255 y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~ 334 (424)
T 3nxp_A 255 YNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVE 334 (424)
T ss_dssp CBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCC
T ss_pred CCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEc
Confidence 469999999987 566788899987643 24889999998631 00 1122222222221
Q ss_pred ---ccccccCcceeeEEEEc--------ccccCCCCCceEE-e---CC--EEEEEEeeecCCC--CceeEEeehHHHHHH
Q 007765 242 ---PTQYVHGATQLMAIQID--------AAINPGNSGGPAI-M---GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHF 302 (590)
Q Consensus 242 ---~~~~~~~~~~~~~i~~~--------~~i~~G~SGGPl~-~---~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~ 302 (590)
+...........+++.. ...|.|||||||+ . +| .|+||++++.... ...+....+....++
T Consensus 335 ~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgVyT~Vs~y~~W 414 (424)
T 3nxp_A 335 RPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKW 414 (424)
T ss_dssp HHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEEEEECTTCHHH
T ss_pred HHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHH
Confidence 11111111111234442 2578999999999 5 33 6999999876522 234666676666666
Q ss_pred HHHHH
Q 007765 303 ITGVV 307 (590)
Q Consensus 303 l~~l~ 307 (590)
|++..
T Consensus 415 I~~~i 419 (424)
T 3nxp_A 415 IQKVI 419 (424)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 136
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.12 E-value=1.1e-10 Score=105.03 Aligned_cols=95 Identities=16% Similarity=0.180 Sum_probs=66.5
Q ss_pred ccccccceeeeccHh-hhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHH
Q 007765 315 FCSLGLSCQTTENVQ-LRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDH 390 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~-~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~ 390 (590)
+++|||.++...+.. ..+.+++.+...|++|..|.++|||+++ |++||+|++|||++|.+ +.++ ..
T Consensus 37 ~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~----------~~ 106 (139)
T 2vz5_A 37 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA----------RK 106 (139)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH----------HH
T ss_pred cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHH----------HH
Confidence 789999986532221 1234555444689999999999999999 99999999999999995 4432 34
Q ss_pred HhhccCCCCEEEEEEEeCCEEEEEEEEEec
Q 007765 391 LVSMKKPNEKSLVRVLRDGKEHEFSITLRL 420 (590)
Q Consensus 391 ~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~ 420 (590)
++.. ..|+.+.|+|.|+|+...+.+.+..
T Consensus 107 ~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 107 RLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp HHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred HHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 5544 5789999999999998877766543
No 137
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.09 E-value=2.4e-09 Score=122.21 Aligned_cols=170 Identities=19% Similarity=0.196 Sum_probs=106.9
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecC-CCCeEEEEecCC-cccCccee
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-ECDLAILIVESD-EFWEGMHF 205 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~-~~DlAlLkv~~~-~~~~~~~~ 205 (590)
...+.|.+|++.+|||||||+.+. ..+.|.+.. ..+.+...-+..++ .+||||||++.+ .|.+.+.|
T Consensus 585 ~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~P 664 (791)
T 4dur_A 585 MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP 664 (791)
T ss_dssp CEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCCC
T ss_pred CeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCceee
Confidence 457999999999999999999753 456666531 12234444444444 579999999987 56678889
Q ss_pred EEcCCCC---CCCCeEEEEecCCCCC---C---ceEEEeEEeccccccc--ccCcceeeEEEEc-----ccccCCCCCce
Q 007765 206 LELGDIP---FLQQAVAVVGYPQGGD---N---ISVTKGVVSRVEPTQY--VHGATQLMAIQID-----AAINPGNSGGP 269 (590)
Q Consensus 206 ~~l~~~~---~~G~~V~~iG~p~g~~---~---~~v~~G~Vs~~~~~~~--~~~~~~~~~i~~~-----~~i~~G~SGGP 269 (590)
+.|.... ..|..+++.||..... . ..+..-+++...+... ........++... ...+.||||||
T Consensus 665 IcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGGP 744 (791)
T 4dur_A 665 ACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGP 744 (791)
T ss_dssp CBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCE
T ss_pred eeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCcccc
Confidence 8887543 3488999999864311 0 1223333332222111 1111111234432 34688999999
Q ss_pred EE-e-CC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHHHH
Q 007765 270 AI-M-GN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGVVE 308 (590)
Q Consensus 270 l~-~-~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l~~ 308 (590)
|+ . +| .|+||++++.... ...+....+.....+|++..+
T Consensus 745 Lv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 745 LVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp EEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred eEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 99 4 34 4999999875422 235677777777777776553
No 138
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.08 E-value=3.1e-10 Score=96.10 Aligned_cols=73 Identities=19% Similarity=0.287 Sum_probs=63.3
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
..|++|..|.++|||++.|++||+|++|||++|.+|.++. ..+.....|+.+.|+|.|+|+..++++++.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFI----------DYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHH----------HHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 4799999999999998339999999999999999998653 566665679999999999999999999887
Q ss_pred cCC
Q 007765 420 LLQ 422 (590)
Q Consensus 420 ~~~ 422 (590)
.++
T Consensus 76 ~~~ 78 (100)
T 3i18_A 76 AID 78 (100)
T ss_dssp ECS
T ss_pred cCC
Confidence 654
No 139
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.06 E-value=8.3e-10 Score=126.42 Aligned_cols=172 Identities=14% Similarity=0.135 Sum_probs=100.9
Q ss_pred CCceEEEEEEeCCeEEEcCcccCC---CcEEEEEEcCCCcEEEEEEEEecC----------------CCCeEEEEecCC-
Q 007765 138 RETTGSGFVIPGKKILTNAHVVAD---STFVLVRKHGSPTKYRAQVEAVGH----------------ECDLAILIVESD- 197 (590)
Q Consensus 138 ~~~~GsGfiI~~g~IlT~aHvv~~---~~~i~V~~~~~~~~~~a~vv~~d~----------------~~DlAlLkv~~~- 197 (590)
....|.|.+|++.||||||||+.+ ...+.|.+....+.+..+-+..++ .+||||||++.+
T Consensus 482 ~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv 561 (741)
T 3hrz_D 482 GHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 561 (741)
T ss_dssp ----EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCC
T ss_pred CCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcC
Confidence 446799999999999999999974 346788875445566665555544 359999999987
Q ss_pred cccCcceeEEcCCCC--------CCCCeEEEEecCCCCCC-----------ceEEE---eEEecc---cccc-------c
Q 007765 198 EFWEGMHFLELGDIP--------FLQQAVAVVGYPQGGDN-----------ISVTK---GVVSRV---EPTQ-------Y 245 (590)
Q Consensus 198 ~~~~~~~~~~l~~~~--------~~G~~V~~iG~p~g~~~-----------~~v~~---G~Vs~~---~~~~-------~ 245 (590)
.+...+.|+.|.... ..|..+.+.||...... ..+.. -++... .+.. +
T Consensus 562 ~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 641 (741)
T 3hrz_D 562 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 641 (741)
T ss_dssp CCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhhhhhhcccc
Confidence 566778898887421 23555555554321110 01111 122100 0000 0
Q ss_pred c-----cCcceeeEEEE-------cccccCCCCCceEE-e-CCE--EEEEEeeecCCCCc-------e-----eEEeehH
Q 007765 246 V-----HGATQLMAIQI-------DAAINPGNSGGPAI-M-GNK--VAGVAFQNLSGAEN-------I-----GYIIPVP 297 (590)
Q Consensus 246 ~-----~~~~~~~~i~~-------~~~i~~G~SGGPl~-~-~G~--vVGI~~~~~~~~~~-------~-----~~aip~~ 297 (590)
. .......+++. +...|.|||||||+ . +|+ ++||++++.....+ . ++...+.
T Consensus 642 ~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~ 721 (741)
T 3hrz_D 642 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 721 (741)
T ss_dssp TTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGG
T ss_pred ccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhH
Confidence 0 00011123443 23468999999999 3 343 99999998621121 2 6777788
Q ss_pred HHHHHHHHHHHc
Q 007765 298 VIKHFITGVVEH 309 (590)
Q Consensus 298 ~i~~~l~~l~~~ 309 (590)
..++||++..+.
T Consensus 722 ~~~~WI~~~i~~ 733 (741)
T 3hrz_D 722 QVLPWLKEKLQD 733 (741)
T ss_dssp GSHHHHHHHTTT
T ss_pred HhHHHHHHHhcC
Confidence 888888876644
No 140
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.02 E-value=2.9e-10 Score=93.63 Aligned_cols=68 Identities=21% Similarity=0.309 Sum_probs=57.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITL 418 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l 418 (590)
.|+.|..+.|+|||+++ |++||+|++|||++|.+|.++. .++.....|+.+.++|.|+|+..++.+++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHH----------HHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 57888888899999999 9999999999999999998653 55655557899999999999988777653
No 141
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.99 E-value=3.5e-10 Score=94.60 Aligned_cols=73 Identities=30% Similarity=0.434 Sum_probs=62.9
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
..|++|..|.++|||++.|++||+|++|||+++.++.++. .++.....|+.+.|+|.|+|+.+++++++.
T Consensus 4 ~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 73 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIV----------SYVREKQAGDRVRVTFIRDRKQHEAELVLK 73 (94)
T ss_dssp CCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHH----------HHHHHSCTTCCEEEEEEETTEEEEEEECCC
T ss_pred CCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 4789999999999998779999999999999999987643 566665689999999999999999888876
Q ss_pred cCC
Q 007765 420 LLQ 422 (590)
Q Consensus 420 ~~~ 422 (590)
..+
T Consensus 74 ~~~ 76 (94)
T 2kl1_A 74 PFP 76 (94)
T ss_dssp BCS
T ss_pred eCC
Confidence 553
No 142
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.98 E-value=2.8e-09 Score=119.45 Aligned_cols=167 Identities=19% Similarity=0.176 Sum_probs=95.8
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~ 199 (590)
...+.|.+|++.||||||||+.+. ..+.|.+.. +...+..+-+..++ .+||||||++.+ .+
T Consensus 413 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~ 492 (625)
T 2f83_A 413 RHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 492 (625)
T ss_dssp EEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCC
T ss_pred cEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCcccC
Confidence 457999999999999999999753 346676531 12334555455554 369999999987 56
Q ss_pred cCcceeEEcCCCC---CCCCeEEEEecCCCCCC----ceEEEe---EEeccccc-ccccCcceeeEEE-----EcccccC
Q 007765 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKG---VVSRVEPT-QYVHGATQLMAIQ-----IDAAINP 263 (590)
Q Consensus 200 ~~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~----~~v~~G---~Vs~~~~~-~~~~~~~~~~~i~-----~~~~i~~ 263 (590)
.+.+.|+.|.... ..++.+++.||...... ..+... +++.-.+. .+........++. .....+.
T Consensus 493 ~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C~ 572 (625)
T 2f83_A 493 TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 572 (625)
T ss_dssp BTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------C
T ss_pred CCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCCC
Confidence 6678899887643 34788999998642110 011111 22211111 1100000001111 1235689
Q ss_pred CCCCceEE--eCC--EEEEEEeeecCCC--CceeEEeehHHHHHHHHH
Q 007765 264 GNSGGPAI--MGN--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITG 305 (590)
Q Consensus 264 G~SGGPl~--~~G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~ 305 (590)
|||||||+ .+| .|+||++++..-. ...+....+....++|++
T Consensus 573 GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~ 620 (625)
T 2f83_A 573 GDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILE 620 (625)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHH
T ss_pred CCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 99999999 456 5999999875411 234555666665666554
No 143
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.98 E-value=3.6e-09 Score=115.34 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=55.3
Q ss_pred CceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcCCCcEEEEEEEEecC----------------CCCeEEEEecCC-c
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGSPTKYRAQVEAVGH----------------ECDLAILIVESD-E 198 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~~~~~~~a~vv~~d~----------------~~DlAlLkv~~~-~ 198 (590)
...|.|.+|++.||||+|||+.+. ..+.|.+....+.+..+-+..|| .+||||||++.+ .
T Consensus 241 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~ 320 (497)
T 1rrk_A 241 HESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK 320 (497)
T ss_dssp CEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCC
T ss_pred CceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCc
Confidence 457999999999999999999753 46888875434555555444433 359999999987 5
Q ss_pred ccCcceeEEcCCC
Q 007765 199 FWEGMHFLELGDI 211 (590)
Q Consensus 199 ~~~~~~~~~l~~~ 211 (590)
|.+.+.|+.|...
T Consensus 321 ~~~~v~picLp~~ 333 (497)
T 1rrk_A 321 YGQTIRPICLPCT 333 (497)
T ss_dssp CBTTBCCCBCTTB
T ss_pred CCCCeeeeeCCCC
Confidence 6678899999753
No 144
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.96 E-value=1.1e-10 Score=96.97 Aligned_cols=72 Identities=21% Similarity=0.344 Sum_probs=61.6
Q ss_pred CceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEec
Q 007765 341 TGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLRL 420 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~~ 420 (590)
.|++|..|.++|||++.|++||+|++|||++|.++.++. .++....+|+++.|+|.|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLI----------DYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHH----------HHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHH----------HHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 378889999999998789999999999999999987643 5665555799999999999999998888875
Q ss_pred CC
Q 007765 421 LQ 422 (590)
Q Consensus 421 ~~ 422 (590)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 145
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.96 E-value=4.3e-10 Score=93.10 Aligned_cols=61 Identities=21% Similarity=0.312 Sum_probs=50.5
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEe--cCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPI--ANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v--~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++ .++.++ ..++.....|+++.|+|.|+|+
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEW----------EEAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHH----------HHHHHHHHHHTEEEEEEEEEC-
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHH----------HHHHHhcCCCCEEEEEEEeCCC
Confidence 368999999999999999 999999999999999 666654 2555444468899999999874
No 146
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.95 E-value=8.8e-10 Score=120.63 Aligned_cols=178 Identities=12% Similarity=0.093 Sum_probs=99.9
Q ss_pred CCccCCCC--CCceEEEEEEeCCeEEEcCcccCCC---cEEEEEEcCC----CcEEEEEEEEecC---------------
Q 007765 130 LPWQNKSQ--RETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGS----PTKYRAQVEAVGH--------------- 185 (590)
Q Consensus 130 ~p~~~~~~--~~~~GsGfiI~~g~IlT~aHvv~~~---~~i~V~~~~~----~~~~~a~vv~~d~--------------- 185 (590)
.||+-.-. ....|.|.+|++.||||||||+.+. ..+.|.+... ++.+..+-+..||
T Consensus 235 ~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~ 314 (509)
T 2odp_A 235 TPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEF 314 (509)
T ss_dssp CTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCC
T ss_pred CCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccc
Confidence 47764332 2357999999999999999999753 4567776321 3445554444443
Q ss_pred -CCCeEEEEecCC-cccCcceeEEcCCCC--------CCCCeEEEEecCCCCCC-----------ceEEEeEEe---ccc
Q 007765 186 -ECDLAILIVESD-EFWEGMHFLELGDIP--------FLQQAVAVVGYPQGGDN-----------ISVTKGVVS---RVE 241 (590)
Q Consensus 186 -~~DlAlLkv~~~-~~~~~~~~~~l~~~~--------~~G~~V~~iG~p~g~~~-----------~~v~~G~Vs---~~~ 241 (590)
.+|||||+++.+ .|...+.|+.|.... ..|..+.+.||...... ..+...++. ...
T Consensus 315 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 394 (509)
T 2odp_A 315 YGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTS 394 (509)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHH
T ss_pred cCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHH
Confidence 369999999987 566788999997532 23555555454211110 112222221 111
Q ss_pred ccc--------cc-----cCcceeeEEEEc----ccccCCCCCceEE-e-CC--EEEEEEeeecCCCCc-----------
Q 007765 242 PTQ--------YV-----HGATQLMAIQID----AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGAEN----------- 289 (590)
Q Consensus 242 ~~~--------~~-----~~~~~~~~i~~~----~~i~~G~SGGPl~-~-~G--~vVGI~~~~~~~~~~----------- 289 (590)
+.. +. .......+++.. ...|.|||||||+ . +| .++||++++....++
T Consensus 395 C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~ 474 (509)
T 2odp_A 395 CAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRA 474 (509)
T ss_dssp HHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCC
T ss_pred HHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccC
Confidence 111 10 000111245543 2578999999999 4 33 499999998631111
Q ss_pred ------e--eEEeehHHHHHHHHHHH
Q 007765 290 ------I--GYIIPVPVIKHFITGVV 307 (590)
Q Consensus 290 ------~--~~aip~~~i~~~l~~l~ 307 (590)
+ ++...+.....|+++..
T Consensus 475 ~~Pg~~y~~~vyt~V~~~~~WI~~~~ 500 (509)
T 2odp_A 475 PRSKVPPPRDFHINLFRMQPWLRQHL 500 (509)
T ss_dssp CTTCSSCCCEEEEEGGGCHHHHHHHH
T ss_pred cccCCCCCCceeeeHHHHhHHHHHHh
Confidence 0 35666777777777655
No 147
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=98.94 E-value=5.1e-09 Score=104.64 Aligned_cols=143 Identities=14% Similarity=0.169 Sum_probs=80.2
Q ss_pred HhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeC------CeEEEcCcccCCC----cEEEEEEcC---C-----
Q 007765 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPG------KKILTNAHVVADS----TFVLVRKHG---S----- 172 (590)
Q Consensus 111 ~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~------g~IlT~aHvv~~~----~~i~V~~~~---~----- 172 (590)
.+.++|++|... ....|+|++|++ .||||||||+.+. ..++|.+.. +
T Consensus 20 ~~~~aV~rl~~~---------------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~ 84 (268)
T 1arb_A 20 DIIRAVGAYSKS---------------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84 (268)
T ss_dssp TGGGGEEEEEET---------------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTT
T ss_pred HhhceEEEEEeC---------------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCcccccc
Confidence 457899998641 236799999996 6999999999752 345565521 0
Q ss_pred -----------C-cE-EEEEEEEecCCCCeEEEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCC----------
Q 007765 173 -----------P-TK-YRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---------- 229 (590)
Q Consensus 173 -----------~-~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~---------- 229 (590)
. +. ....+...+..+||||||++.+. + .+..+++.||......
T Consensus 85 ~~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v-----~---------~~~~~~vsGWG~t~~~~~~~~~~~~~ 150 (268)
T 1arb_A 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA-----N---------PAFNLFWAGWDRRDQNYPGAIAIHHP 150 (268)
T ss_dssp SGGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC-----C---------GGGCCEEBCEECCSCCCSCEEEEECG
T ss_pred ccccccccCCcceEEeccceEecCCCCCceEEEEecCCC-----C---------CCCceEEeCcCccCCCCCcceeeccC
Confidence 0 11 22334444667999999999752 1 1222333343221110
Q ss_pred ----ceEEEeEEecccccccccCcceeeEEEE--c---ccccCCCCCceEE-eCCEEEEEEeeec
Q 007765 230 ----ISVTKGVVSRVEPTQYVHGATQLMAIQI--D---AAINPGNSGGPAI-MGNKVAGVAFQNL 284 (590)
Q Consensus 230 ----~~v~~G~Vs~~~~~~~~~~~~~~~~i~~--~---~~i~~G~SGGPl~-~~G~vVGI~~~~~ 284 (590)
..+....+... ...+. ......+++. . ...|.|||||||+ .+++++||++++.
T Consensus 151 ~~~l~~i~~~~~~~~-~~~~~-~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 151 NVAEKRISNSTSPTS-FVAWG-GGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp GGCSCEEEEECSCCE-EECTT-SSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred CcccEEEEeeccccc-ccccc-ccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 01111111100 00011 0000123333 2 2478999999999 6899999999875
No 148
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=3.5e-10 Score=98.60 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=68.8
Q ss_pred HcCcccccccc----ccceeeeccHhhhhhcCCCC---CcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCccc
Q 007765 308 EHGKYVGFCSL----GLSCQTTENVQLRNNFGMRS---EVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVA 379 (590)
Q Consensus 308 ~~g~~~~~~~l----Gi~~~~~~~~~~~~~lgl~~---~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~ 379 (590)
++|++. ++|+ ||.++.. + ..+|+.- ...|++|..|.++|||+++ |++||+|++|||++|.++.++.
T Consensus 8 ~~g~v~-r~~l~~~~~v~l~~~-~----~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~ 81 (117)
T 1uit_A 8 GERRKD-RPYVEEPRHVKVQKG-S----EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQ 81 (117)
T ss_dssp CCCCSC-CCCSCCCEEEEEECS-S----CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHH
T ss_pred ccCccc-cccCCCCEEEEEEeC-C----CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 467777 8999 8888765 2 2333311 1368999999999999999 9999999999999999987642
Q ss_pred ccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 380 FRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
..+.....++.+.|+|.|+++..+
T Consensus 82 ----------~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 82 ----------ARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp ----------HHHHTTSCCSEEEEEECCCSCCCC
T ss_pred ----------HHHHHHcCCCeEEEEEEECCchhh
Confidence 333334678999999999887554
No 149
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.90 E-value=1.1e-08 Score=113.37 Aligned_cols=178 Identities=22% Similarity=0.163 Sum_probs=90.7
Q ss_pred CCCccCCC--CCCceEEEEEEeCCeEEEcCcccCCC--cEEEEEEcC---------CCcEEEEEEEEecC-------CCC
Q 007765 129 GLPWQNKS--QRETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG---------SPTKYRAQVEAVGH-------ECD 188 (590)
Q Consensus 129 ~~p~~~~~--~~~~~GsGfiI~~g~IlT~aHvv~~~--~~i~V~~~~---------~~~~~~a~vv~~d~-------~~D 188 (590)
..||+-.. .....+.|.+|++.||||||||+.+. ..+.|.+.. ....+..+-+..++ .+|
T Consensus 332 ~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nD 411 (565)
T 2xrc_A 332 DLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQND 411 (565)
T ss_dssp CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTC
T ss_pred CCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCccccc
Confidence 45776543 22356999999999999999999753 345554320 12334444444444 469
Q ss_pred eEEEEecCCc-cc----CcceeEEcCCCC---CCCCeEEEEecCCCCCC---ceEEEeEEecccc--cccccCcceeeEE
Q 007765 189 LAILIVESDE-FW----EGMHFLELGDIP---FLQQAVAVVGYPQGGDN---ISVTKGVVSRVEP--TQYVHGATQLMAI 255 (590)
Q Consensus 189 lAlLkv~~~~-~~----~~~~~~~l~~~~---~~G~~V~~iG~p~g~~~---~~v~~G~Vs~~~~--~~~~~~~~~~~~i 255 (590)
|||||++.+. +. ..+.|+.|.... ..|+.+++.||...... ..+....+.-+.. ..+........++
T Consensus 412 IALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~~~~~~~i 491 (565)
T 2xrc_A 412 IALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNRFYEKEME 491 (565)
T ss_dssp CEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTSCCTTTEE
T ss_pred ceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccCcCCCceE
Confidence 9999999863 22 245677776443 34889999998643210 1111222221111 1111100000123
Q ss_pred EEc-----ccccCCCCCceEE-eC--C--EEEEEEeeecCCC--CceeEEeehHHHHHHHHHH
Q 007765 256 QID-----AAINPGNSGGPAI-MG--N--KVAGVAFQNLSGA--ENIGYIIPVPVIKHFITGV 306 (590)
Q Consensus 256 ~~~-----~~i~~G~SGGPl~-~~--G--~vVGI~~~~~~~~--~~~~~aip~~~i~~~l~~l 306 (590)
... ...+.|||||||+ .+ | .|+||++++..-. ...+....+.....+|++.
T Consensus 492 CAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~ 554 (565)
T 2xrc_A 492 CAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYH 554 (565)
T ss_dssp EEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHH
T ss_pred EeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHH
Confidence 221 3468999999999 53 4 4999999875421 2345666666666666654
No 150
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.87 E-value=3.6e-09 Score=88.76 Aligned_cols=82 Identities=15% Similarity=0.298 Sum_probs=60.7
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVS 393 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~ 393 (590)
.++|||.+...... . .......|++|..|.++|||+++ |++||+|++|||+++.++.++. ....
T Consensus 13 ~~glG~~i~~g~~~--~---~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~ 77 (97)
T 2w4f_A 13 TGGLGISIAGGKGS--T---PYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 77 (97)
T ss_dssp TTBSSEEEEECTTS--C---CSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCceeEEEECCccC--C---cccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 56788887643110 0 01112479999999999999999 9999999999999999987642 2222
Q ss_pred ccCCCCEEEEEEEeCCEE
Q 007765 394 MKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 394 ~~~~g~~v~l~V~R~g~~ 411 (590)
....|+.+.|+|.|+|+.
T Consensus 78 ~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 78 LRGAGTAVQMRVWRERET 95 (97)
T ss_dssp HHTSCSEEEEEEECCSSC
T ss_pred HhCCCCeEEEEEEeCCcc
Confidence 234799999999998864
No 151
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.83 E-value=9.5e-09 Score=87.34 Aligned_cols=82 Identities=16% Similarity=0.124 Sum_probs=60.0
Q ss_pred ccccccceeeeccH--hhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCC--cccccccccchHH
Q 007765 315 FCSLGLSCQTTENV--QLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG--TVAFRNRERITFD 389 (590)
Q Consensus 315 ~~~lGi~~~~~~~~--~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~--~v~~~~~~~~~~~ 389 (590)
.++||+.++.-.+. ....+.+++ ...|++|..|.++|||+++ |++||+|++|||+++.+.. ++ .
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~-~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~ 86 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDK-TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA----------R 86 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSST-TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH----------H
T ss_pred CCcccEEEECccccCccccccccCC-CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------H
Confidence 56799998832122 222223333 3689999999999999999 9999999999999998754 33 2
Q ss_pred HHhhccCCCCEEEEEEEeC
Q 007765 390 HLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 390 ~~~~~~~~g~~v~l~V~R~ 408 (590)
..+.. ..|+.+.++|.|+
T Consensus 87 ~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 87 KRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHTC-TTCSEEEEEEEEC
T ss_pred HHHHh-CCCCEEEEEEEcC
Confidence 34433 5788999999884
No 152
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.83 E-value=1.2e-08 Score=91.10 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=72.7
Q ss_pred eeccEEEeeCCH---HHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeec
Q 007765 438 IFAGLVFIPLTQ---PYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEI 514 (590)
Q Consensus 438 ~~~Gl~~~~l~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v 514 (590)
.|+|+.+..+++ .+.+.+|.. ....++++|..|.+++||+ +|+++||+|++|||++|
T Consensus 29 ~~LGv~~~~~~~~~~~~~~~lgl~-------------------~~~~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v 88 (134)
T 2l97_A 29 PALGIQMVNLSNVSTSDIRRLNIP-------------------SNVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEI 88 (134)
T ss_dssp CCCCCEEEESSSSCHHHHHHHSSC-------------------SSSCSCEEEEECSTTSGGG-TTSCSSCEEEEETTEEC
T ss_pred eEeeEEEEECCchhHHHHHHcCCC-------------------cCCCCCEEEEEECCCCchH-HCCCCCCEEEEECCEEc
Confidence 468998888764 555666653 0124678999999999999 99999999999999999
Q ss_pred CCHHHHHHHHHhc-CCCceEEEeCC-CeEEEEEech
Q 007765 515 ENLKHLCQLVENC-SSENLRFDLDD-DRVVVLNYDV 548 (590)
Q Consensus 515 ~~~~~l~~~v~~~-~~~~v~l~~~r-~~~i~l~~~~ 548 (590)
.+|.+|.+++... +++.+++++.| ++.+.+....
T Consensus 89 ~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 124 (134)
T 2l97_A 89 ASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKL 124 (134)
T ss_dssp CCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 9999999999987 68899999987 4555555443
No 153
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=6.8e-09 Score=89.27 Aligned_cols=83 Identities=14% Similarity=0.280 Sum_probs=59.9
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVS 393 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~ 393 (590)
+..|||.+..-.+. -.+.....|++|..|.++|||+++ |++||+|++|||++|.+..+.. ....
T Consensus 25 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS-----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCeeeEEEEccccC-----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 45677776532110 011123579999999999999999 9999999999999999876532 2222
Q ss_pred ccCCCCEEEEEEEeCCEEE
Q 007765 394 MKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 394 ~~~~g~~v~l~V~R~g~~~ 412 (590)
....|+.+.|+|.|+|+.+
T Consensus 90 ~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp HHSCCSEEEEEEEECSSCC
T ss_pred hhCCCCeEEEEEEECCccC
Confidence 2237999999999998754
No 154
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=6.8e-09 Score=87.67 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=58.8
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVS 393 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~ 393 (590)
.++||+.+..... ...|++|..|.++|||+++ |++||+|++|||+++.++. +. +++.
T Consensus 21 ~~~lG~~~~~~~~-----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~----------~~~~ 78 (100)
T 2eeh_A 21 AGRLGFSVRGGSE-----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MG----------SAVK 78 (100)
T ss_dssp SSSCSEEEECCTT-----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HH----------HHHH
T ss_pred CCCccEEEEcccc-----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HH----------HHHH
Confidence 4679998876421 1368999999999999999 9999999999999999874 21 3333
Q ss_pred ccCCCCEEEEEEEeCCEE
Q 007765 394 MKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 394 ~~~~g~~v~l~V~R~g~~ 411 (590)
....++.+.|+|.|+|+.
T Consensus 79 ~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHHSCSSEEEEEEECSCC
T ss_pred hhcCCCEEEEEEEECCcC
Confidence 333488999999998864
No 155
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.80 E-value=4.3e-09 Score=87.17 Aligned_cols=66 Identities=23% Similarity=0.353 Sum_probs=56.2
Q ss_pred eEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 343 VLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 343 v~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
++|..|.++|||+++ |++||+|++|||+++.+|.++. ..+.. ..|+.+.++|.|+|+..++.+++.
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~~-~~g~~v~l~v~R~g~~~~~~v~~~ 72 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFV----------MLVRD-NPGXSLALEIERQGSPLSLTLIPE 72 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHH----------HHHHH-CTTCCEEEEEEETTEEEEEEECCE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHH----------HHHhc-CCCCeEEEEEEECCeEEEEEEEEe
Confidence 567889999999999 9999999999999999998653 45544 378899999999999888877754
No 156
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=6.2e-09 Score=92.16 Aligned_cols=97 Identities=20% Similarity=0.201 Sum_probs=73.4
Q ss_pred cCCCCEEEEEEEeCCEEEEEEEEEecCCCCCCCccCCCCCcceeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhc
Q 007765 395 KKPNEKSLVRVLRDGKEHEFSITLRLLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRE 474 (590)
Q Consensus 395 ~~~g~~v~l~V~R~g~~~~~~v~l~~~~~l~~~~~~~~~p~~~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~ 474 (590)
..+|+++.++|+|+|+.+++++++.... .+||.+.....
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~~~~----------------~lG~~~~~~~~------------------------- 43 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLGDGR----------------SLGLTIRGGAE------------------------- 43 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECCSSC----------------CCCEEEECCTT-------------------------
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEECCCC----------------ccCEEEECccc-------------------------
Confidence 4578899999999999999888875321 24776554210
Q ss_pred CCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHH--HHHHHHhcCCCceEEEeCCC
Q 007765 475 LPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKH--LCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 475 ~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~--l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+|+++||+|++|||++|.++.+ +.+.++. ++.+.|++.|+
T Consensus 44 -----~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~v~l~v~R~ 103 (128)
T 1uf1_A 44 -----YGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS--SRHLILTVKDV 103 (128)
T ss_dssp -----TTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSEEEEEEECC
T ss_pred -----CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCeEEEEEEEC
Confidence 1236799999999999999999999999999999999654 4555544 45788888774
No 157
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.79 E-value=5.3e-09 Score=86.65 Aligned_cols=62 Identities=21% Similarity=0.235 Sum_probs=51.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.+. ++..++.. .|+++.|+|.|+|+..
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHL--------EAQNRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHT--CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCccc
Confidence 58999999999999999 999999999999999998732 12244443 7899999999988754
No 158
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.78 E-value=4.3e-09 Score=87.29 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=54.1
Q ss_pred cHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEE
Q 007765 327 NVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSL 402 (590)
Q Consensus 327 ~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~ 402 (590)
++..++.+|++. ..|++|..|.++|||+++ |++||+|++|||+++. ++.++ ..++.. .++.+.
T Consensus 10 ~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~v~ 76 (92)
T 3cyy_A 10 KSAKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDA----------KTLIER--SKGKLK 76 (92)
T ss_dssp CSSTTSCCCEEE-EEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHH----------HHHHHT--TTTEEE
T ss_pred eCCCCCCCCEEE-eCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCcEE
Confidence 556667778754 268999999999999987 9999999999999999 66543 244433 345899
Q ss_pred EEEEeCCEEEEEEE
Q 007765 403 VRVLRDGKEHEFSI 416 (590)
Q Consensus 403 l~V~R~g~~~~~~v 416 (590)
++|.|+|+..++.+
T Consensus 77 l~v~r~g~~~~~~v 90 (92)
T 3cyy_A 77 MVVQRDERATLLNV 90 (92)
T ss_dssp EEEEC---------
T ss_pred EEEEeCCceeeeeC
Confidence 99999998776654
No 159
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.74 E-value=1.7e-08 Score=83.97 Aligned_cols=59 Identities=22% Similarity=0.340 Sum_probs=49.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.+. +++.....|+++.|+|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-----------EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-----------HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-----------HHHHhhcCCCEEEEEEEECCC
Confidence 68999999999999999 999999999999999987643 333334479999999999753
No 160
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.74 E-value=6.6e-09 Score=83.79 Aligned_cols=77 Identities=19% Similarity=0.296 Sum_probs=58.3
Q ss_pred ccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhc
Q 007765 319 GLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSM 394 (590)
Q Consensus 319 Gi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~ 394 (590)
|+.+..+ ++..++.+|+.. ..|++|..|.++|||+++ |++||+|++|||+++. ++.++ ..++..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDA----------KTLIER 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEE-EEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHH----------HHHHHT
T ss_pred CeEEEEE-ECCCCCCCCEEE-eCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHC
Confidence 5566666 677777888754 278999999999999876 9999999999999999 66543 245543
Q ss_pred cCCCCEEEEEEEeCC
Q 007765 395 KKPNEKSLVRVLRDG 409 (590)
Q Consensus 395 ~~~g~~v~l~V~R~g 409 (590)
.++.+.++|.|+|
T Consensus 69 --~~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 --SKGKLKMVVQRDE 81 (81)
T ss_dssp --STTEEEEEEEC--
T ss_pred --CCCeEEEEEEeCC
Confidence 3458999999875
No 161
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.74 E-value=3.3e-08 Score=85.37 Aligned_cols=94 Identities=12% Similarity=0.155 Sum_probs=73.0
Q ss_pred eeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCH
Q 007765 438 IFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL 517 (590)
Q Consensus 438 ~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~ 517 (590)
.++|+.+..+++.....++.. +..-.+...+++|..|.+++||+.+|+++||+|++|||+++.++
T Consensus 6 ~~lGi~~~~l~~~~~~~~~~~---------------~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 70 (113)
T 2pzd_A 6 RYIGVMMLTLSPSILAELQLR---------------EPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA 70 (113)
T ss_dssp EECCEEEEECCHHHHHHHHHH---------------CSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred cEeEEEEEeCCHHHHHHhccc---------------cccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH
Confidence 367999999998776664431 00001235788999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEeCCC-eEEEEEech
Q 007765 518 KHLCQLVENCSSENLRFDLDDD-RVVVLNYDV 548 (590)
Q Consensus 518 ~~l~~~v~~~~~~~v~l~~~r~-~~i~l~~~~ 548 (590)
.+|.++++. ++.+.+++.|+ +.+.+....
T Consensus 71 ~~~~~~l~~--~~~v~l~v~R~g~~~~~~v~~ 100 (113)
T 2pzd_A 71 EDVYEAVRT--QSQLAVQIRRGRETLTLYVTP 100 (113)
T ss_dssp HHHHHHHHH--CSSEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHhC--CCeEEEEEEECCEEEEEEEEE
Confidence 999999987 67889988874 555555543
No 162
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1.1e-08 Score=86.81 Aligned_cols=82 Identities=17% Similarity=0.106 Sum_probs=55.1
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHH
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDH 390 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~ 390 (590)
++++|+.++.. +....+.++++. ..|++|..|.++|||+++ |++||+|++|||++|.+ +.++ ..
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~~-~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~ 82 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA----------VE 82 (103)
T ss_dssp -CCCCEEEECC-CC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH----------HH
T ss_pred CCceeEEEEcc-CCCCcccccCCC-CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HH
Confidence 57899998876 444444445543 479999999999999987 99999999999999988 4433 25
Q ss_pred HhhccCCCCEEEEEEEeCCE
Q 007765 391 LVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 391 ~~~~~~~g~~v~l~V~R~g~ 410 (590)
++... ++.+.|+|.|.++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 55433 4589999998654
No 163
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.73 E-value=7.7e-09 Score=85.69 Aligned_cols=61 Identities=15% Similarity=0.256 Sum_probs=46.2
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++. ++.++ ..++... |+.+.|+|.|+++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKV----------VDRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHH----------HHHHTTS--CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHcC--CCEEEEEEEeCCccc
Confidence 368899999999999999 9999999999999998 55443 2455433 899999999987653
No 164
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.72 E-value=6.4e-09 Score=87.09 Aligned_cols=77 Identities=13% Similarity=0.217 Sum_probs=57.6
Q ss_pred ccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhcc
Q 007765 317 SLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMK 395 (590)
Q Consensus 317 ~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~ 395 (590)
.+|+.+.... +++. ..|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++..
T Consensus 15 ~~G~~l~~~~--------~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~- 76 (96)
T 2v90_A 15 GFGFLLREEK--------GLDG-RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHE--------ETVSRIQG- 76 (96)
T ss_dssp BSCEEEEEEE--------CTTS-CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHH--------HHHHHHHT-
T ss_pred cccEEEEecc--------CCCC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc-
Confidence 4777775431 3322 468999999999999999 999999999999999984211 22244543
Q ss_pred CCCCEEEEEEEeCCEEE
Q 007765 396 KPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 396 ~~g~~v~l~V~R~g~~~ 412 (590)
.|+.+.|+|.|+|+..
T Consensus 77 -~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 77 -QGSCVSLTVVDPEADR 92 (96)
T ss_dssp -TTTEEEEEEECCCTTS
T ss_pred -CCCEEEEEEECCCCcc
Confidence 3899999999987654
No 165
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.71 E-value=2.5e-08 Score=85.98 Aligned_cols=83 Identities=18% Similarity=0.249 Sum_probs=64.6
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-c-CCCCEEEEECCEEecC--CCcccccccccchHHHH
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIAN--DGTVAFRNRERITFDHL 391 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L-~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~ 391 (590)
..+|+.+.... ...|++|..|.++|||+++ | ++||+|++|||+++.+ +.++ ..+
T Consensus 13 ~glG~~~~~~~------------~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~----------~~~ 70 (112)
T 1qau_A 13 GGLGFLVKERV------------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSA----------LEV 70 (112)
T ss_dssp TBTSEEEEECS------------SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHH----------HHH
T ss_pred CceeEEEEecC------------CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 45777765431 1368999999999999999 8 9999999999999998 5443 245
Q ss_pred hhccCCCCEEEEEEEeCCEEEEEEEEEecC
Q 007765 392 VSMKKPNEKSLVRVLRDGKEHEFSITLRLL 421 (590)
Q Consensus 392 ~~~~~~g~~v~l~V~R~g~~~~~~v~l~~~ 421 (590)
+.. ..|+.+.++|.|+|+..++++.....
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~ 99 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTFT 99 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEEC
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeecc
Confidence 544 46889999999999888777766543
No 166
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.71 E-value=2.1e-08 Score=88.26 Aligned_cols=67 Identities=21% Similarity=0.291 Sum_probs=55.9
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
..|++|..|.++|||+++|++||+|++|||++|.+|.++. ..+.....|+.+.|+| |+|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~----------~~l~~~~~g~~v~l~V-R~g~---~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYS----------AALKTISVGEVINITT-DQGT---FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHH----------HHHTTCCTTCEEEEEE-TTEE---EEEECC
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEE-ECCE---EEEEEe
Confidence 4799999999999999889999999999999999998653 5555456789999999 9987 555554
Q ss_pred c
Q 007765 420 L 420 (590)
Q Consensus 420 ~ 420 (590)
.
T Consensus 90 ~ 90 (125)
T 2hga_A 90 R 90 (125)
T ss_dssp B
T ss_pred c
Confidence 3
No 167
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.71 E-value=2.7e-08 Score=85.84 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=71.4
Q ss_pred eeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCH
Q 007765 438 IFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL 517 (590)
Q Consensus 438 ~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~ 517 (590)
.++|+.+.++++.....++.. +..-.+...+++|..|.+++||+.+++++||+|++|||+++.++
T Consensus 6 ~~lGi~~~~l~~~~~~~~~~~---------------~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 70 (112)
T 2p3w_A 6 RFIGIRMRTITPSLVDELKAS---------------NPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS 70 (112)
T ss_dssp EECCEEEEECCHHHHHHHHHH---------------CTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred ceeeEEEecCCHHHHHHhccc---------------CcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH
Confidence 367999999998766664431 00001235688999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEeCC-CeEEEEEec
Q 007765 518 KHLCQLVENCSSENLRFDLDD-DRVVVLNYD 547 (590)
Q Consensus 518 ~~l~~~v~~~~~~~v~l~~~r-~~~i~l~~~ 547 (590)
.+|.++++ +++.+.|++.| ++.+.+...
T Consensus 71 ~~~~~~l~--~g~~v~l~v~R~g~~~~~~v~ 99 (112)
T 2p3w_A 71 SELQEAVL--TESPLLLEVRRGNDDLLFSIA 99 (112)
T ss_dssp HHHHHHHH--HCSSEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHh--CCCeEEEEEEECCEEEEEEEE
Confidence 99999994 47788999887 455555444
No 168
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.70 E-value=5.8e-09 Score=90.95 Aligned_cols=63 Identities=19% Similarity=0.293 Sum_probs=53.5
Q ss_pred cCceEEEEeCC--CChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEE
Q 007765 340 VTGVLVNKINP--LSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEF 414 (590)
Q Consensus 340 ~~gv~V~~V~~--~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~ 414 (590)
..|++|..|.+ +|||+++ |++||+|++|||++|.+| .++. .++... |+.+.|+|.|+|+.+++
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~----------~~l~~~--g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVE----------DAIKQT--SQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHH----------HHHHCC--SSCEEEEEEECSSCCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHH----------HHHHhC--CCEEEEEEEECCEEEee
Confidence 47999999999 9999999 999999999999999999 6543 555443 88999999999876543
No 169
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=1.9e-08 Score=85.10 Aligned_cols=73 Identities=25% Similarity=0.296 Sum_probs=57.4
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhc
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSM 394 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~ 394 (590)
..+|+.+.... +...|++|..|.++|||+++ |++||+|++|||++|.++.+. +.+..
T Consensus 21 ~~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~ 78 (101)
T 1uez_A 21 EGLGFSIRGGS-----------EHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-----------EAVKA 78 (101)
T ss_dssp TCSSEEEEECT-----------TTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-----------HHHHH
T ss_pred CcccEEEeCCC-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-----------HHHHh
Confidence 44677775431 11368999999999999999 999999999999999998753 34444
Q ss_pred cCCCCEEEEEEEeCCE
Q 007765 395 KKPNEKSLVRVLRDGK 410 (590)
Q Consensus 395 ~~~g~~v~l~V~R~g~ 410 (590)
...++.+.|+|.|+|+
T Consensus 79 ~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 79 LKGSKKLVLSVYSAGR 94 (101)
T ss_dssp SSSSSSCCEEECCCCC
T ss_pred hcCCCeEEEEEEECCc
Confidence 4567789999999875
No 170
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.68 E-value=2.9e-08 Score=95.54 Aligned_cols=85 Identities=16% Similarity=0.136 Sum_probs=66.6
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCC-CCEEEEECCEEecCCCcccccccccchHHHHh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKK-DDIILAFDGVPIANDGTVAFRNRERITFDHLV 392 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~-GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~ 392 (590)
.+++|+.++.+ ++..++ ..|++|..|.++|||+++ |++ ||+|++|||+ +.++.++. ..+
T Consensus 94 ~~~lGi~~~~~-~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~----------~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLF----------SLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHH----------HHH
T ss_pred cCccceEEeec-ChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHH----------HHH
Confidence 56799999877 443332 269999999999999999 999 9999999998 99998754 666
Q ss_pred hccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 393 SMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
... .|+++.|+|.|++....+++++.
T Consensus 155 ~~~-~g~~v~l~v~r~~~~~~~~v~l~ 180 (209)
T 3rle_A 155 ETH-EAKPLKLYVYNTDTDNCREVIIT 180 (209)
T ss_dssp HHT-TTSCEEEEEEETTTTEEEEEEEC
T ss_pred HhC-CCCeEEEEEEECCceEEEEEEEE
Confidence 554 89999999999764333444443
No 171
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.67 E-value=4.1e-08 Score=101.82 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=78.4
Q ss_pred eeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCC
Q 007765 437 YIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN 516 (590)
Q Consensus 437 ~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~ 516 (590)
..++|+.++++++...+.++.+ ..++++|.+|.+++||+.+|+++||+|++|||++|.+
T Consensus 239 ~~~lGv~~~~~~~~~a~~~gl~---------------------~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~ 297 (345)
T 3stj_A 239 RGLLGIKGTEMSADIAKAFNLD---------------------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNS 297 (345)
T ss_dssp CEECCEEEEECCHHHHHHTTCS---------------------CCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSC
T ss_pred ccccceeeEeecHHHHHhcCCC---------------------CCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCC
Confidence 3578999999999888888875 4578999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc-CCCceEEEeCCC-eEEEEEech
Q 007765 517 LKHLCQLVENC-SSENLRFDLDDD-RVVVLNYDV 548 (590)
Q Consensus 517 ~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~~~~ 548 (590)
+.+|.+++... +++.++|++.|+ +.+.+.+..
T Consensus 298 ~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 331 (345)
T 3stj_A 298 FAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTL 331 (345)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEE
Confidence 99999999885 788999999884 555555443
No 172
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.66 E-value=6.8e-08 Score=107.09 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=65.3
Q ss_pred hhcCCC--CCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 332 NNFGMR--SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 332 ~~lgl~--~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
..+|+. ....|++|..|.++|||+++ |++||+|++|||++| ++.++ ..++.....|++++|+|.|+
T Consensus 485 ~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l----------~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 485 VNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSV----------KRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp CCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTH----------HHHHTTCCTTCEEEEEEEET
T ss_pred cccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHH----------HHHHHhcCCCCEEEEEEEEC
Confidence 456652 22458999999999999999 999999999999999 56654 36776667899999999999
Q ss_pred CEEEEEEEEEecC
Q 007765 409 GKEHEFSITLRLL 421 (590)
Q Consensus 409 g~~~~~~v~l~~~ 421 (590)
|+.+++++++...
T Consensus 554 g~~~~~~v~l~~~ 566 (597)
T 4fgm_A 554 DELMTLELTWQEP 566 (597)
T ss_dssp TEEEEEEEECCCC
T ss_pred CEEEEEEEEecCC
Confidence 9999999988654
No 173
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.66 E-value=3e-08 Score=87.26 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=52.2
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++ .++ ...+.....|+.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEA----------VLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHH----------HHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhcCCCCEEEEEEEECCch
Confidence 68999999999999999 999999999999999998 443 24555556899999999998653
No 174
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.64 E-value=7.1e-08 Score=79.59 Aligned_cols=60 Identities=13% Similarity=0.235 Sum_probs=49.1
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.. .|+.+.|+|.|.+.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHA--------EVVASIKA--REDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHH--------HHHHHHTT--SSSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCcEEEEEEccCC
Confidence 68999999999999999 999999999999999998321 12245543 38899999999764
No 175
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.64 E-value=5.1e-08 Score=80.09 Aligned_cols=60 Identities=17% Similarity=0.144 Sum_probs=45.7
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..+ ++|||+ + |++||+|++|||+++.++..- ++..++.....|+++.|+|.|+|+
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHN--------QVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHH--------HHHHHHHTSCTTCEEEEEEEEECC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHH--------HHHHHHHhCCCCCEEEEEEEeCCc
Confidence 68888887 999999 8 999999999999999988311 122445444578999999999874
No 176
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.64 E-value=3.9e-08 Score=86.39 Aligned_cols=82 Identities=17% Similarity=0.106 Sum_probs=57.5
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHH
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDH 390 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~ 390 (590)
.+++||.++.. ++...+.++++. ..|++|..|.++|||+++ |++||+|++|||++|.+ +.++ ..
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~ 102 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQA----------VE 102 (123)
T ss_dssp TSCCSEEEEEC-C---------CC-CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHH----------HH
T ss_pred CCCccEEEEec-cCccccccccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HH
Confidence 46899998876 443334344433 479999999999999987 99999999999999988 4433 24
Q ss_pred HhhccCCCCEEEEEEEeCCE
Q 007765 391 LVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 391 ~~~~~~~g~~v~l~V~R~g~ 410 (590)
++... ++.+.|+|.|...
T Consensus 103 ~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHC--CSSEEEEEECCCC
T ss_pred HHHcC--CCeEEEEEEECCc
Confidence 55432 5589999998653
No 177
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.64 E-value=1.5e-07 Score=83.49 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=62.4
Q ss_pred CceEEEEEEeCCeEEEcCcccCCCcEEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccCc
Q 007765 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (590)
Q Consensus 139 ~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~--------~~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~ 202 (590)
...|.|.+|++.+|||+|||+.+ ..+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 102 (131)
T 1yph_C 24 FHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQT 102 (131)
T ss_dssp CEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCCc
Confidence 35799999999999999999976 334555421 12344454444443 469999999987 56677
Q ss_pred ceeEEcCCCC---CCCCeEEEEecCC
Q 007765 203 MHFLELGDIP---FLQQAVAVVGYPQ 225 (590)
Q Consensus 203 ~~~~~l~~~~---~~G~~V~~iG~p~ 225 (590)
+.|+.|.... ..|+.+++.||..
T Consensus 103 v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 103 VSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CcceECCCcccCCCCCCEEEEEcCCc
Confidence 8999997643 3589999999853
No 178
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.63 E-value=5e-08 Score=83.28 Aligned_cols=61 Identities=15% Similarity=0.245 Sum_probs=51.1
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+ + |++||+|++|||+++.++.+.. ........|+.+.|+|.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAF----------AVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHH----------HHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHH----------HHHHhhCCCCEEEEEEEECCCC
Confidence 4699999999999999 9 9999999999999999997542 3333345789999999998754
No 179
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.5e-08 Score=89.12 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=63.0
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLV 392 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~ 392 (590)
+.+||+.++... +. ....|++|..|.++|||+++ |++||+|++|||++|.++.++. .++
T Consensus 31 ~~~lG~~~~~~~-~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~l 91 (124)
T 1wh1_A 31 QDKLGLTVCYRT-DD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAV----------ALL 91 (124)
T ss_dssp TCCCCEEEECCC-CC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHH----------HHH
T ss_pred CCcccEEEEecC-CC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHH----------HHH
Confidence 456899887662 11 11379999999999999998 9999999999999999887543 566
Q ss_pred hccCCCCEEEEEEEeCCEEEEE
Q 007765 393 SMKKPNEKSLVRVLRDGKEHEF 414 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~g~~~~~ 414 (590)
.. ..|+.+.|+|.|+|+..+.
T Consensus 92 ~~-~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 92 TS-EENKNFSLLIARPELQLDE 112 (124)
T ss_dssp TC-SSCCSCCEEEEECSSCCCC
T ss_pred Hh-CCCCEEEEEEEECCEEeec
Confidence 44 4688999999999876543
No 180
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.63 E-value=7.9e-08 Score=81.11 Aligned_cols=67 Identities=9% Similarity=0.092 Sum_probs=56.7
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCCC-eEEEEEec
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~~~ 547 (590)
..++++|..|.+++||++ |+++||+|++|||++|.+|.+|.+++... +++.+.+++.|+ +.+.+...
T Consensus 5 ~~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 73 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIK 73 (100)
T ss_dssp CCCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred eCCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEE
Confidence 357899999999999986 99999999999999999999999999985 578899999874 44444333
No 181
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.63 E-value=3.1e-07 Score=83.62 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=77.1
Q ss_pred CCCCeEEEEecCC-cccCcceeEEcCCCC-CCCCeEEEEecCCCCC-------C---ceEEEeEEecccccccccCccee
Q 007765 185 HECDLAILIVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGD-------N---ISVTKGVVSRVEPTQYVHGATQL 252 (590)
Q Consensus 185 ~~~DlAlLkv~~~-~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~-------~---~~v~~G~Vs~~~~~~~~~~~~~~ 252 (590)
..+||||||++.+ .|.+.+.|+.|.... ..|+.+++.||..... . ..+..-+++.-.+..........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 4689999999987 566778999998654 4589999999864221 0 11222233322221111111111
Q ss_pred eEEEEc-----ccccCCCCCceEEeCCEEEEEEeee-cCCC--CceeEEeehHHHHHHHHHHH
Q 007765 253 MAIQID-----AAINPGNSGGPAIMGNKVAGVAFQN-LSGA--ENIGYIIPVPVIKHFITGVV 307 (590)
Q Consensus 253 ~~i~~~-----~~i~~G~SGGPl~~~G~vVGI~~~~-~~~~--~~~~~aip~~~i~~~l~~l~ 307 (590)
..++.. ...|.|||||||+.+|+++||++++ .... ...+....+....+++++..
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 148 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLICNGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTI 148 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEETTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEECCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 234432 3568999999999779999999987 3321 23566777777777777654
No 182
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=2.2e-08 Score=88.55 Aligned_cols=70 Identities=23% Similarity=0.249 Sum_probs=58.4
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSITLR 419 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~l~ 419 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.+. +++.....++.+.|+|.|+|+..++.+++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~-----------~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHD-----------EAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHH-----------HHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHH-----------HHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 58999999999999999 999999999999999997641 444444567899999999999887777665
Q ss_pred cC
Q 007765 420 LL 421 (590)
Q Consensus 420 ~~ 421 (590)
..
T Consensus 115 ~~ 116 (128)
T 1uf1_A 115 ET 116 (128)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 183
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.62 E-value=3.9e-08 Score=82.02 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=58.4
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCC-CeEEEEEech
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDD-DRVVVLNYDV 548 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r-~~~i~l~~~~ 548 (590)
...+++|..|.+++||+. ++++||+|++|||+++.++.+|.++++.. +++.+.|++.| ++.+.+....
T Consensus 3 ~~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 3 EAKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CCCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 356789999999999998 99999999999999999999999999987 68899999987 4555555443
No 184
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.62 E-value=2.5e-09 Score=92.67 Aligned_cols=68 Identities=21% Similarity=0.222 Sum_probs=53.6
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSIT 417 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~ 417 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.. .|+++.|+|.|+++..++++.
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHA--------QVVELVRK--SGNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHH--------HHHHHHHH--TCSEEEEEEECHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCcceehhhc
Confidence 479999999999999999 999999999999999986221 12244433 489999999998876554433
No 185
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.61 E-value=5.6e-08 Score=79.84 Aligned_cols=60 Identities=10% Similarity=0.185 Sum_probs=48.6
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.. .++.+.++|.|+|.
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHL--------EAQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHT--CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEeCCC
Confidence 57899999999999999 999999999999999998421 12233432 38899999999874
No 186
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.61 E-value=1.8e-06 Score=82.76 Aligned_cols=167 Identities=13% Similarity=0.174 Sum_probs=104.7
Q ss_pred HhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCC-cEEEEEEcCCCcEEEEE-----EEEe
Q 007765 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADS-TFVLVRKHGSPTKYRAQ-----VEAV 183 (590)
Q Consensus 111 ~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~-~~i~V~~~~~~~~~~a~-----vv~~ 183 (590)
-+...|+++...... ...+-+=|. ..||+||+|..... ..++|+.. .| .|... -+..
T Consensus 13 ~ia~~iC~l~n~sdg--------------~~~~l~gigyG~~iItn~HLf~rnng~L~I~s~-hG-~f~v~nt~~lki~~ 76 (241)
T 3mmg_A 13 PISACVCLLENSSDG--------------HSERLFGIGFGPYIIANQHLFRRNNGELTIKTM-HG-EFAVANSTQLQMKP 76 (241)
T ss_dssp HHHTTEEEEEEEETT--------------EEEEEEEEEETTEEEECGGGGSSTTCEEEEEET-TE-EEEEEEGGGSCEEE
T ss_pred hhhheEEEEEEEeCC--------------CEEEEEEEeECCEEEEChhhcccCCCeEEEEEC-Cc-eEEccCCCceeeEE
Confidence 345778888765421 223334444 88999999999854 46888875 33 33332 2455
Q ss_pred cCCCCeEEEEecCCcccCcceeEEcC---CCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEccc
Q 007765 184 GHECDLAILIVESDEFWEGMHFLELG---DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAA 260 (590)
Q Consensus 184 d~~~DlAlLkv~~~~~~~~~~~~~l~---~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~ 260 (590)
-+..||.|+|++.. ++|.+-. ..+..+|.|.++|..+.....+. .||.........+ ..++..-..
T Consensus 77 i~g~DiiiIrmPkD-----fpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~s---~vSesS~i~p~~~---~~fWkHwIs 145 (241)
T 3mmg_A 77 VEGRDIIVIKMAKD-----FPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVSS---LVSESSHIVHKED---TSFWQHWIT 145 (241)
T ss_dssp CTBSSCEEEECCTT-----SCCCCSCCCBCCCCTTCCEEEEEEEECSSCEEE---EEEEEECCEECTT---SSEEEECBC
T ss_pred eCCccEEEEeCCCC-----CCCcchhcccCCCCCCCeEEEEEeecccCCccE---EECCcceeEEcCC---CCEEEEEcC
Confidence 67899999999754 4444332 34567999999997654332222 2322111111111 135777778
Q ss_pred ccCCCCCceEE--eCCEEEEEEeeecCCCCceeEEeeh--HHHHHHHHH
Q 007765 261 INPGNSGGPAI--MGNKVAGVAFQNLSGAENIGYIIPV--PVIKHFITG 305 (590)
Q Consensus 261 i~~G~SGGPl~--~~G~vVGI~~~~~~~~~~~~~aip~--~~i~~~l~~ 305 (590)
...|+.|+||+ .||.+|||++..... ...+|+.|+ +.+..+|+.
T Consensus 146 T~~G~CGlPlVs~~Dg~IVGiHsl~~~~-~~~N~F~~f~~~f~~~~L~~ 193 (241)
T 3mmg_A 146 TKDGQAGSPLVSIIDGNILGIHSLTHTT-NGSNYFVEFPEKFVATYLDA 193 (241)
T ss_dssp CCTTCTTCEEEETTTCCEEEEEEEEETT-TCCEEEEECCTTHHHHHTTC
T ss_pred CCCCcCCCeEEEcCCCcEEEEEecccCC-CCcEEEEcCCHHHHHHHhhC
Confidence 88999999999 799999999987653 334666655 444445554
No 187
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.61 E-value=1.9e-08 Score=84.48 Aligned_cols=60 Identities=25% Similarity=0.387 Sum_probs=49.9
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+ +.++ ..++... .++.+.++|.|+|+
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~-~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDV----------VSAIRAG-GDETKLLVVDRETD 94 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH----------HHHHHTT-TTEEEEEECCHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhC-CCcEEEEEEECCch
Confidence 358999999999999999 99999999999999998 5543 3555544 77788899998765
No 188
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.60 E-value=3.7e-08 Score=82.06 Aligned_cols=59 Identities=20% Similarity=0.288 Sum_probs=49.1
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++ .++ ..++... ++.+.|+|.|+|+.
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~--~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEA----------QSKIRQS--ASPLRLQLDRSSGP 91 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHH----------HHHHHTC--CSSEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhC--CCcEEEEEEECCcC
Confidence 58999999999999999 999999999999999987 432 2444432 38899999998864
No 189
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.60 E-value=4.7e-08 Score=80.10 Aligned_cols=58 Identities=21% Similarity=0.305 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++ .++ ..++... . +.+.|+|.|+|+
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~-~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEA----------QSKIRQS-P-SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHH----------HHHHHTC-C-SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHcC-C-CeEEEEEEecCC
Confidence 58999999999999999 999999999999999984 433 3555443 3 789999999874
No 190
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.59 E-value=9e-09 Score=85.39 Aligned_cols=64 Identities=8% Similarity=0.162 Sum_probs=54.3
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCCC-eEEEEEec
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~~~ 547 (590)
+++|..|.+++||+. ++++||+|++|||++|.++.+|.++++.. +++.+.|++.|+ +.+.+.+.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 67 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLT 67 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEE
Confidence 456778999999998 99999999999999999999999999987 688999999884 44444333
No 191
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.3e-07 Score=78.28 Aligned_cols=62 Identities=18% Similarity=0.207 Sum_probs=47.7
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..++.+.|+|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCV--------ELAHEIR--SCPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCCCC
Confidence 57899999999999999 999999999999999987422 1223333 24678999999987654
No 192
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.57 E-value=6.5e-08 Score=78.83 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=47.7
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.... +..++ ...++++.++|.|+|+
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLE--------AQNKI--KSASYNLSLTLQKSKR 85 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHH--------HHHHH--TTCSSCEEEEEESCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH--------HHHHH--HcCCCeEEEEEEeCCC
Confidence 58899999999999999 9999999999999999984221 11222 2356779999999874
No 193
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.56 E-value=1.5e-07 Score=80.81 Aligned_cols=80 Identities=21% Similarity=0.274 Sum_probs=58.4
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhh
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVS 393 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~ 393 (590)
..+|+.+...... . ....|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.
T Consensus 22 ~glG~~~~~~~~~-----~---~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~--------~~~~~l~ 85 (111)
T 2koj_A 22 EGLGFSITSRDVT-----I---GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQE--------EVVSLLR 85 (111)
T ss_dssp TBTCEEEEECSCS-----S---SSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHH--------HHHHHHH
T ss_pred CccCEEEEeccCC-----C---CCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 3478777654110 0 11368999999999999987 999999999999999876311 2234554
Q ss_pred ccCCCCEEEEEEEeCCEE
Q 007765 394 MKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 394 ~~~~g~~v~l~V~R~g~~ 411 (590)
....|+.+.|+|.|+|+.
T Consensus 86 ~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 86 STKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HCCCSSEEEEEEEECCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 444689999999998764
No 194
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.56 E-value=2.4e-08 Score=84.72 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=57.0
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHHH
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHL 391 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~ 391 (590)
..++|+.+..-. + ...+++|..|.++|||+++ |++||+|++|||++|.+ +.++ ..+
T Consensus 14 ~~~lG~~l~~g~----------~-~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~ 72 (103)
T 1v5l_A 14 PAPWGFRLSGGI----------D-FNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADA----------QDR 72 (103)
T ss_dssp SSCCSBCCEEET----------T-TTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHH----------HHH
T ss_pred CCCcCEEEeccc----------c-CCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 456787775431 1 1247899999999999999 99999999999999998 5543 245
Q ss_pred hhccCCCCEEEEEEEeCCEE
Q 007765 392 VSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 392 ~~~~~~g~~v~l~V~R~g~~ 411 (590)
+... ++.+.|+|.|+|+.
T Consensus 73 l~~~--g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 73 IKAA--SYQLCLKIDRAETR 90 (103)
T ss_dssp HTTC--CSEEECEECCCTTT
T ss_pred HHhC--CCeEEEEEEECCeE
Confidence 5433 89999999998864
No 195
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.56 E-value=8.9e-08 Score=98.28 Aligned_cols=89 Identities=11% Similarity=-0.001 Sum_probs=71.2
Q ss_pred eeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCH
Q 007765 438 IFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL 517 (590)
Q Consensus 438 ~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~ 517 (590)
.++|+.+.++++...+.++. +...+++|..|.+++||+.+|+++||+|++|||++|.++
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~---------------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~ 279 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGI---------------------DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA 279 (318)
T ss_dssp EECCEEEEECSCCCSSSSCS---------------------SSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH
T ss_pred ccceeEeeecchhHHHhccC---------------------CCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH
Confidence 46788887776543333333 245788999999999999999999999999999999999
Q ss_pred HHHHHHHHh-cCCCceEEEeCCC-eEEEEEec
Q 007765 518 KHLCQLVEN-CSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 518 ~~l~~~v~~-~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
.+|.++++. .+++.++|++.|+ +.+.+.+.
T Consensus 280 ~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 311 (318)
T 1te0_A 280 LETMDQVAEIRPGSVIPVVVMRDDKQLTLQVT 311 (318)
T ss_dssp HHHHHHHHTSCTTCEEEEEEESSSCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 999999997 6788999999884 55555444
No 196
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.55 E-value=1.3e-07 Score=78.85 Aligned_cols=61 Identities=20% Similarity=0.274 Sum_probs=48.6
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... ....+ ...|+.+.++|.|+++
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL--------AAQII--QASGERVNLTIARPGK 90 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH--HHCCSEEEEEEEEESC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCEEEEEEEcCCc
Confidence 368999999999999987 9999999999999998865321 11222 2358999999999775
No 197
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.54 E-value=1.4e-07 Score=77.92 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=47.6
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.+.. ...++. ..|+.+.|+|.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL--------VVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCEEEEEEEeC
Confidence 68999999999999999 9999999999999999986432 112222 4588999999886
No 198
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.54 E-value=1.1e-07 Score=78.03 Aligned_cols=64 Identities=8% Similarity=0.015 Sum_probs=53.2
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCCC-eEEEEE
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDDD-RVVVLN 545 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~ 545 (590)
.++.+..+.|+++++.+|+++||+|++|||++|.+|.+|.++++.. +++.+.+++.|+ +.+.+.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 84 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVY 84 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 4667777777777899999999999999999999999999999875 577899998874 544443
No 199
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.54 E-value=1.3e-07 Score=80.43 Aligned_cols=70 Identities=17% Similarity=0.108 Sum_probs=48.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSIT 417 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~ 417 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... ....+ ...|+.+.|+|.|+++...+.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEE--------AVTAL--KNTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HSCCSEEEEEEECCCC-------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCCCCCcccc
Confidence 368999999999999987 9999999999999998754321 11222 23588999999999988777665
Q ss_pred Ee
Q 007765 418 LR 419 (590)
Q Consensus 418 l~ 419 (590)
..
T Consensus 102 p~ 103 (105)
T 2awx_A 102 HH 103 (105)
T ss_dssp --
T ss_pred cc
Confidence 43
No 200
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.54 E-value=1e-07 Score=79.57 Aligned_cols=55 Identities=13% Similarity=0.184 Sum_probs=50.5
Q ss_pred EEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCC-CceEEEeCCC
Q 007765 485 ILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSS-ENLRFDLDDD 539 (590)
Q Consensus 485 vl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~-~~v~l~~~r~ 539 (590)
+|..|.+++||+.+|+++||+|++|||++|.+|+++.+.+..+++ +.+.+++.|+
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~ 60 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPF 60 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEEC
Confidence 688899999999999999999999999999999999999988765 7899999874
No 201
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.53 E-value=1.1e-07 Score=78.21 Aligned_cols=60 Identities=13% Similarity=0.187 Sum_probs=48.2
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.++|.|+++
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHI--------EAQNKIR--ACGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHH--------HHHHHHH--TCTTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCEEEEEEEeCCC
Confidence 58899999999999999 999999999999999976321 1223332 248899999999775
No 202
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=2e-08 Score=85.19 Aligned_cols=67 Identities=9% Similarity=0.148 Sum_probs=52.8
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSIT 417 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v~ 417 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++.... +..++. ..++.+.|+|.|+++..+++++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~g~~~~~~v~ 96 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLE--------AQNKIK--ACTGSLNMTLQRASAAAKSEPV 96 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHH--------HHHHHH--HCSSEEEEEECCCSCCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCcCCCCCC
Confidence 46889999999999999 9999999999999999984321 112332 2488999999999987665543
No 203
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.53 E-value=1.8e-07 Score=81.78 Aligned_cols=63 Identities=21% Similarity=0.260 Sum_probs=50.5
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.....|+.+.|+|.|+|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQE--------EVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHH--------HHHHHHHHCCSSCEEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHH--------HHHHHHhcCCCCCEEEEEEEeCCC
Confidence 368999999999999987 999999999999999986311 223455444468999999999874
No 204
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.52 E-value=1.2e-07 Score=79.50 Aligned_cols=61 Identities=28% Similarity=0.329 Sum_probs=48.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++.. .|+.+.|+|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQ--------AVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHhc--CCCeEEEEEEeCCC
Confidence 468999999999999987 999999999999999998432 12244433 78999999999874
No 205
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.52 E-value=1.1e-07 Score=80.26 Aligned_cols=74 Identities=15% Similarity=0.180 Sum_probs=55.5
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhh-c-cCCCCEEEEECCEEe--cCCCcccccccccchHHHH
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPI--ANDGTVAFRNRERITFDHL 391 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v--~~~~~v~~~~~~~~~~~~~ 391 (590)
.+||+.++.-. .+ ....+++|..|.++|||++ + |++||+|++|||+++ .++.++ ..+
T Consensus 21 ~~lG~~i~~~~-------~~--~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~----------~~~ 81 (101)
T 2yt7_A 21 EGLGVALVESG-------WG--SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAAC----------QAA 81 (101)
T ss_dssp CCCCEEEEECC-------CS--SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHH----------HHH
T ss_pred CccCEEEEeCC-------CC--CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 46888876421 01 1124799999999999999 6 999999999999999 566543 356
Q ss_pred hhccCCCCEEEEEEEeC
Q 007765 392 VSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 392 ~~~~~~g~~v~l~V~R~ 408 (590)
+.....|+.+.|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 65555789999999874
No 206
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=8e-08 Score=80.03 Aligned_cols=60 Identities=13% Similarity=0.120 Sum_probs=48.7
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++.... +..++. ..++++.|+|.|+|+
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLE--------AQNRIK--GCHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHH--------HHHHHH--TCCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCC
Confidence 67899999999999999 9999999999999999974321 122332 368889999999875
No 207
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.51 E-value=4.3e-08 Score=86.55 Aligned_cols=80 Identities=19% Similarity=0.256 Sum_probs=62.7
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-c-CCCCEEEEECCEEecC--CCcccccccccchHHHH
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIAN--DGTVAFRNRERITFDHL 391 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L-~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~ 391 (590)
..+|+.+.... ...|++|..|.++|||+++ | ++||+|++|||+++.+ +.++ ..+
T Consensus 20 ~glG~~~~~~~------------~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~----------~~~ 77 (127)
T 1b8q_A 20 GGLGFLVKERV------------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSA----------LEV 77 (127)
T ss_dssp SCCSCCEEECT------------TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHH----------HHH
T ss_pred CcEeEEEEecC------------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 45777765431 1358999999999999999 8 9999999999999998 5543 255
Q ss_pred hhccCCCCEEEEEEEeCCEEEEEEEEE
Q 007765 392 VSMKKPNEKSLVRVLRDGKEHEFSITL 418 (590)
Q Consensus 392 ~~~~~~g~~v~l~V~R~g~~~~~~v~l 418 (590)
+.. ..|+.+.|+|.|+|+..++++..
T Consensus 78 l~~-~~g~~v~l~v~R~g~~~~~~~~~ 103 (127)
T 1b8q_A 78 LRG-IASETHVVLILRGPEGFTTHLET 103 (127)
T ss_dssp HHS-CCSSCEEEEEECCCCSEEECCCC
T ss_pred HHh-CCCCeEEEEEEeCCceEEEEEEE
Confidence 544 47889999999999887776654
No 208
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.51 E-value=6.6e-08 Score=77.81 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=50.0
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.++++..|.++++|+.++ +++||+|++|||+++. +++++.++++...+ .+.+++.|+
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~ 80 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG-KLKMVVQRD 80 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT-EEEEEEEC-
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCC-eEEEEEEeC
Confidence 568999999999999999 9999999999999999 99999999987554 777777663
No 209
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.50 E-value=9.1e-08 Score=80.42 Aligned_cols=61 Identities=20% Similarity=0.174 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.|+|.|+|+.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHM--------DVVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHH--HSCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHh--cCCCEEEEEEEECCCc
Confidence 37899999999999999 999999999999999944321 1223443 4789999999997653
No 210
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.50 E-value=8e-08 Score=81.87 Aligned_cols=63 Identities=24% Similarity=0.283 Sum_probs=51.0
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.|+|.|+++..
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~~~ 88 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHA--------QVVELVR--KSGNSVTLLVLDGDSYE 88 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHH--------HHHHHHH--HTTTEEEEEEECHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCEEEEEEEECCeee
Confidence 468999999999999999 999999999999999998621 1224443 46889999999977543
No 211
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.50 E-value=2.5e-07 Score=78.91 Aligned_cols=70 Identities=23% Similarity=0.252 Sum_probs=52.4
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE-EEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK-EHEFSI 416 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~-~~~~~v 416 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++.... ...++ ...++++.|+|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEE--------AVTAL--KNTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHH--HSCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--hCCCCeEEEEEEeCCCCCeEEEE
Confidence 468999999999999987 9999999999999998754321 11233 2457799999999875 334445
Q ss_pred EEe
Q 007765 417 TLR 419 (590)
Q Consensus 417 ~l~ 419 (590)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 212
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.50 E-value=2.4e-07 Score=77.63 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=49.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..++.+.++|.|+++..+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHD--------EAINVLR--QTPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCCSEEEEEEEECSSCCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEEcCCCCCc
Confidence 58999999999999987 999999999999999987522 1112332 345899999999886543
No 213
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.50 E-value=6.5e-08 Score=80.97 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=50.7
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+ +.++ ..++.. .|+.+.|+|.|+++..
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEA----------MSILKQ--CGQEAALLIEYDVSET 95 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHH----------HHHHHH--SCSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEEEEEeCCCcC
Confidence 368999999999999987 99999999999999998 4433 245543 7899999999987643
No 214
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.49 E-value=3.8e-08 Score=87.10 Aligned_cols=82 Identities=15% Similarity=0.305 Sum_probs=58.4
Q ss_pred ccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhc
Q 007765 317 SLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSM 394 (590)
Q Consensus 317 ~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~ 394 (590)
.||+.++.. ....++.+|++. ..|++|..|.++|||+++ |++||+|++|||++|.+...- ++..++.
T Consensus 43 ~lG~~i~~~-~~~~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~- 111 (128)
T 1nf3_C 43 PLGFYIRDG-SSVRVTPHGLEK-VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLD--------QVTDMMI- 111 (128)
T ss_dssp CCCEEEEEE-EEEEEETTEEEE-EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHH--------HHHHHHH-
T ss_pred CccEEEEcc-ccccccccccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH-
Confidence 367777655 334444455533 368999999999999988 799999999999999544321 1224443
Q ss_pred cCCCCEEEEEEEeCCE
Q 007765 395 KKPNEKSLVRVLRDGK 410 (590)
Q Consensus 395 ~~~g~~v~l~V~R~g~ 410 (590)
..++.+.|+|.|+++
T Consensus 112 -~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 112 -ANSRNLIITVRPANQ 126 (128)
T ss_dssp -HTTTSEEEEEECCCC
T ss_pred -cCCCeEEEEEEECCc
Confidence 346679999999875
No 215
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.49 E-value=1.6e-07 Score=79.75 Aligned_cols=71 Identities=23% Similarity=0.338 Sum_probs=54.1
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHHHh
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLV 392 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~ 392 (590)
.++|+.+..- .+ ...|++|..|.++|||+++ |++||+|++|||++|.+ +.++ ..++
T Consensus 27 ~~lG~~~~~~----------~~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGG----------KA-SQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKA----------VEIL 85 (104)
T ss_dssp CCCSEEEECC----------SS-SCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHH----------HHHH
T ss_pred CCccEEEEcc----------cC-CCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHH
Confidence 4577777642 11 1368999999999999999 99999999999999998 4432 2444
Q ss_pred hccCCCCEEEEEEEeCCE
Q 007765 393 SMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~g~ 410 (590)
.. ++.+.|+|.|+..
T Consensus 86 ~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 86 KT---AREISMRVRFFSG 100 (104)
T ss_dssp HH---SSSEEEEEECCCC
T ss_pred hC---CCEEEEEEEECCC
Confidence 33 7889999988653
No 216
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=1.5e-07 Score=77.40 Aligned_cols=58 Identities=14% Similarity=0.184 Sum_probs=47.4
Q ss_pred CceEEEEeCCCChhhh-c-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.++|||++ + |++||+|++|||+++. +|.++ ..++... .+ .+.|+|.|.++
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~----------~~~l~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQL----------QKMLREM-RG-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHH----------HHHHHHC-CE-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHhcC-CC-cEEEEEECCcC
Confidence 5789999999999999 7 9999999999999999 55543 2555443 44 89999998764
No 217
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.48 E-value=2.7e-08 Score=86.02 Aligned_cols=64 Identities=19% Similarity=0.335 Sum_probs=50.4
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC-CEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD-GKEHEF 414 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~-g~~~~~ 414 (590)
..|++|..|.+++||+++ |++||+|++|||+++.+|.+.. +..++. .++.+.++|.|+ |+...+
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~---~~~~v~l~v~r~~g~~~~~ 105 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLK---SSRSLTISIVAAAGRELFM 105 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHH---HCSSEEEEECSSTTTHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh---cCCeEEEEEEcCCCCceEE
Confidence 368999999999999999 9999999999999999997521 112332 236799999998 765443
No 218
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=2.5e-07 Score=78.25 Aligned_cols=59 Identities=10% Similarity=0.172 Sum_probs=50.5
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||++|.+ ++++.++++...+ .+.|++.|.
T Consensus 37 ~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~ 98 (103)
T 2fcf_A 37 VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGN-PVVFMVQSI 98 (103)
T ss_dssp ----EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS-SEEEEEECC
T ss_pred CCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-cEEEEEEEC
Confidence 34678999999999999999 99999999999999999 9999999998744 888888764
No 219
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.47 E-value=1.9e-07 Score=76.44 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=52.9
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||+++.+ ++++.++++.++ +.+.+++.|+
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 84 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRI 84 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEec
Confidence 57899999999999999999999999999999999 899999999887 8888888775
No 220
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.47 E-value=1.4e-07 Score=82.88 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=54.3
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|.++.+|.++|+..+++.+.|++.|+
T Consensus 47 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~ 106 (124)
T 1wh1_A 47 DIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARP 106 (124)
T ss_dssp CCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCCEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEEEEEEEC
Confidence 4678999999999999999 9999999999999999999999999987788888888764
No 221
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.47 E-value=2.6e-07 Score=76.91 Aligned_cols=61 Identities=21% Similarity=0.352 Sum_probs=46.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.. .++++.+.+.|.+..
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHD--------GVVEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHH--------HHHHHHHT--TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEECCccc
Confidence 48999999999999999 999999999999999998321 12244433 577788888876543
No 222
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.47 E-value=3.8e-07 Score=97.94 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=76.9
Q ss_pred eeeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCc-ceEEEEEEeeccccccccccCCceEEeeCCeecC
Q 007765 437 YIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGE-QLVILSQVLMDDINAGYERFADLQVKKVNGVEIE 515 (590)
Q Consensus 437 ~~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~ 515 (590)
..|+|+.++++++.+.+.+|.+ .. ++++|..|.+++||+.+|+++||+|++|||++|.
T Consensus 257 r~~lGv~~~~~~~~~a~~~gl~---------------------~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~ 315 (451)
T 3pv2_A 257 RGLMGIFVQHLTPELAQAMGYP---------------------EDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKIT 315 (451)
T ss_dssp CCBCCEEEEECCHHHHHHTTSC---------------------TTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECC
T ss_pred cccccceEEeccHHHHHhcCCC---------------------cCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcC
Confidence 4578999999999988888875 33 7899999999999999999999999999999999
Q ss_pred CHHHHHHHHHh-cCCCceEEEeCCC-eEEEEEec
Q 007765 516 NLKHLCQLVEN-CSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 516 ~~~~l~~~v~~-~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
+|.+|..++.. .+++.+++++.|+ +.+.+...
T Consensus 316 ~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~ 349 (451)
T 3pv2_A 316 QATQVKTTISLLRVGSTVKIIVERDNKPLTLSAV 349 (451)
T ss_dssp SHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 99999999987 5678999999884 55444433
No 223
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.46 E-value=1.4e-07 Score=77.98 Aligned_cols=64 Identities=14% Similarity=0.187 Sum_probs=55.4
Q ss_pred EEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCC-CeEEEEEech
Q 007765 485 ILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDD-DRVVVLNYDV 548 (590)
Q Consensus 485 vl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r-~~~i~l~~~~ 548 (590)
++..|.++++|+.+|+++||+|++|||+++.+|.+|.+.+..++++.+.+++.| ++.+.+....
T Consensus 7 ~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~v~~ 71 (91)
T 2zpm_A 7 VLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQGSPLSLTLIP 71 (91)
T ss_dssp BCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEETTEEEEEEECC
T ss_pred EEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEECCeEEEEEEEE
Confidence 577899999999999999999999999999999999999998888899999987 4555555543
No 224
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.45 E-value=2.6e-07 Score=77.16 Aligned_cols=59 Identities=14% Similarity=0.031 Sum_probs=53.7
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+|+++||+|++|||+++.+ ++++.++++.. ++.+.|++.|+
T Consensus 28 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~ 88 (96)
T 2v90_A 28 GRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDP 88 (96)
T ss_dssp SCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECC
T ss_pred CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECC
Confidence 3568999999999999999999999999999999999 89999999985 88899988774
No 225
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.44 E-value=5.1e-07 Score=75.49 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=49.4
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++. ..|+.+.|+|.|+|+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLS--------EAIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCCC
Confidence 68999999999999987 999999999999999876321 1224443 4788999999998764
No 226
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.44 E-value=1.9e-07 Score=77.27 Aligned_cols=67 Identities=16% Similarity=0.307 Sum_probs=53.2
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEe-cCCCcccccccccchHHHHh
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI-ANDGTVAFRNRERITFDHLV 392 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v-~~~~~v~~~~~~~~~~~~~~ 392 (590)
.+||+.++.. ..|++|..|.++|||+++ |++||+|++|||+++ .++.++ ..++
T Consensus 18 ~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~----------~~~l 73 (91)
T 2e7k_A 18 EHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRAL----------QELL 73 (91)
T ss_dssp CCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHH----------HHHH
T ss_pred CcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHH----------HHHH
Confidence 5688887652 368999999999999995 999999999999999 666654 2555
Q ss_pred hccCCCCEEEEEEEeC
Q 007765 393 SMKKPNEKSLVRVLRD 408 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~ 408 (590)
.. .++++.|+|.|.
T Consensus 74 ~~--~~~~v~l~v~~~ 87 (91)
T 2e7k_A 74 RN--ASGSVILKILSG 87 (91)
T ss_dssp HT--CCSSBCEEEECC
T ss_pred Hc--CCCeEEEEEEEC
Confidence 43 467889999874
No 227
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.43 E-value=3.9e-07 Score=75.64 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=48.0
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..++.+.|+|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHE--------EAVASLK--NTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHH--------HHHHHHH--TCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEcCCC
Confidence 468999999999999987 999999999999999987432 1112332 346799999999874
No 228
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.43 E-value=4.8e-07 Score=75.57 Aligned_cols=58 Identities=21% Similarity=0.200 Sum_probs=45.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||+++.+..+.. ........++++.|+|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------SYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH----------HHHHHHTCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhcCCCcEEEEEEeC
Confidence 68999999999999987 9999999999999998754321 1112234567899999985
No 229
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.43 E-value=3.2e-07 Score=76.67 Aligned_cols=56 Identities=14% Similarity=0.185 Sum_probs=46.4
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++ .+ +..++... ++.+.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHRE----------IVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCeEEEEEEEC
Confidence 58999999999999999 999999999999999985 33 23555443 56899999875
No 230
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.43 E-value=4.2e-07 Score=75.77 Aligned_cols=79 Identities=19% Similarity=0.279 Sum_probs=56.5
Q ss_pred ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHh
Q 007765 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLV 392 (590)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~ 392 (590)
...||+.+....... . ....|++|..|.++|||+++ |++||+|++|||+++.++... ++..++
T Consensus 14 ~~~lG~~i~~~~~~~------~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~ 78 (97)
T 2iwn_A 14 VQGLGITIAGYIGDK------K-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQ--------QAVEVL 78 (97)
T ss_dssp TTBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHH--------HHHHHH
T ss_pred CCCCcEEEEccCCCC------C-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHH
Confidence 455888876541110 0 12468999999999999987 999999999999999987532 111233
Q ss_pred hccCCCCEEEEEEEeCCE
Q 007765 393 SMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 393 ~~~~~g~~v~l~V~R~g~ 410 (590)
. ..|+++.|+|.|+|+
T Consensus 79 ~--~~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 79 R--HTGQTVLLTLMRRGE 94 (97)
T ss_dssp H--TCCSEEEEEEEEEEE
T ss_pred H--cCCCeEEEEEEeCCC
Confidence 2 378899999999764
No 231
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.42 E-value=1.5e-07 Score=77.56 Aligned_cols=58 Identities=10% Similarity=0.093 Sum_probs=52.0
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeec--CCHHHHHHHHHhc-CCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEI--ENLKHLCQLVENC-SSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~~-~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||++| .++.+|.++++.. +++.+.|++.|+
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 578999999999999999999999999999999 9999999999874 677888887663
No 232
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.41 E-value=5.2e-07 Score=79.08 Aligned_cols=59 Identities=10% Similarity=0.172 Sum_probs=52.4
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||++|.+ ++++.++++... +.++|++.|.
T Consensus 57 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 118 (123)
T 2iwq_A 57 VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSI 118 (123)
T ss_dssp CCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEECC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 34679999999999999999 99999999999999998 999999998864 4888887763
No 233
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.41 E-value=1.6e-07 Score=76.18 Aligned_cols=58 Identities=16% Similarity=0.153 Sum_probs=46.1
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++. ..++.+.|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHE--------DVVKLIG--KCSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHH--------HHHHHHT--TCSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEEcC
Confidence 57899999999999999 999999999999999998421 1223332 3467799999986
No 234
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.41 E-value=2.5e-07 Score=78.16 Aligned_cols=62 Identities=21% Similarity=0.348 Sum_probs=49.2
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.. .|+.+.|+|.|++..
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHD--------GVVEMIRK--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHH--------HHHHHHHH--STTEEEEEECSTTCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCCc
Confidence 468999999999999999 999999999999999986311 12234433 488999999986544
No 235
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=4.6e-07 Score=76.80 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=49.2
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..+++|..|.++|||+++ |++||+|++|||++|.++... ++..++.. .|+.+.|+|.|+|+.
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHA--------QAVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHH--------HHHHHHHH--TCSEEEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCCC
Confidence 368999999999999987 999999999999999987421 12233322 688999999998753
No 236
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=3.2e-07 Score=79.17 Aligned_cols=61 Identities=16% Similarity=0.213 Sum_probs=48.0
Q ss_pred CceEEEEeCCCChhhhc-c-CCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L-~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.+++||+++ | ++||+|++|||++|.++..- ++..++.. .++++.|+|.|++++
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVN--------EVFDLLSD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--CCEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCcc
Confidence 68999999999999999 8 99999999999999965311 12244432 346899999998764
No 237
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.40 E-value=7.5e-07 Score=91.62 Aligned_cols=94 Identities=11% Similarity=0.127 Sum_probs=75.2
Q ss_pred eeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCH
Q 007765 438 IFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL 517 (590)
Q Consensus 438 ~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~ 517 (590)
.++|+.+..+++...++++..- ..-.+...+++|..|.+++||+.+|+++||+|++|||++|.++
T Consensus 227 ~~lGv~~~~l~~~~~~~~~l~~---------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~ 291 (325)
T 1lcy_A 227 RYIGVMMLTLSPSILAELQLRE---------------PSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA 291 (325)
T ss_dssp EECCEEEEECCHHHHHHHTTSC---------------TTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred cccceEeecCCHHHHHhhCccc---------------cccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH
Confidence 3679999999998887776630 0001134689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceEEEeCCC-eEEEEEech
Q 007765 518 KHLCQLVENCSSENLRFDLDDD-RVVVLNYDV 548 (590)
Q Consensus 518 ~~l~~~v~~~~~~~v~l~~~r~-~~i~l~~~~ 548 (590)
++|.++++. ++.+.|++.|+ +.+.+..+.
T Consensus 292 ~~l~~~l~~--~~~v~l~v~R~g~~~~~~v~~ 321 (325)
T 1lcy_A 292 EDVYEAVRT--QSQLAVQIRRGRETLTLYVTP 321 (325)
T ss_dssp HHHHHHHTT--CSSEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHhC--CCeEEEEEEECCEEEEEEEEE
Confidence 999999986 57899998874 566665543
No 238
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.40 E-value=4.7e-07 Score=74.72 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=34.0
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG 376 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~ 376 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~ 63 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKET 63 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC
Confidence 68999999999999999 9999999999999999864
No 239
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.40 E-value=2e-07 Score=78.17 Aligned_cols=58 Identities=17% Similarity=0.118 Sum_probs=51.7
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.+ ++++.++++..+++.+.+++.|
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R 91 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDR 91 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEEC
Confidence 357899999999999999999999999999999999 9999999999866666676665
No 240
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.40 E-value=1.7e-07 Score=82.40 Aligned_cols=58 Identities=9% Similarity=0.073 Sum_probs=49.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.+++|..|.+++||+++ |++||+|++|||++|. +|.++ ..++.....|+.+.|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~----------~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREF----------LKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHH----------HHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHH----------HHHHhcCCCCCEEEEEEEEC
Confidence 57889999999999998 9999999999999995 56654 36666556799999999998
No 241
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.40 E-value=6.7e-07 Score=76.09 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=49.2
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... +..++ ...|+.+.|+|.|+|+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER--------AAELM--TRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH--HTCCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCcc
Confidence 468999999999999987 9999999999999998654321 11222 23689999999998753
No 242
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.40 E-value=1.6e-07 Score=77.68 Aligned_cols=58 Identities=10% Similarity=0.060 Sum_probs=51.3
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++. +++++.++++.. ++.+.|++.|+
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~ 85 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGK 85 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC-
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeC
Confidence 34678999999999999999999999999999999 999999999987 88888888774
No 243
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.40 E-value=4.1e-07 Score=76.21 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=46.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+ |.++. .++.. .++++.|+|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~----------~~l~~--~~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQ----------KAMKE--TKGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHH----------HHHHH--CCEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEEC
Confidence 68999999999999987 99999999999999996 66543 55543 367888888764
No 244
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=2.5e-07 Score=76.37 Aligned_cols=68 Identities=13% Similarity=0.231 Sum_probs=50.8
Q ss_pred cHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEE
Q 007765 327 NVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLV 403 (590)
Q Consensus 327 ~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l 403 (590)
.+.....+|+.. ..| +|..|.++|||+++ |++||+|++|||++|. ++.++ ..++.. .|+.+.|
T Consensus 19 ~~~~~~~lG~~~-~~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~----------~~~l~~--~g~~v~l 84 (90)
T 1y7n_A 19 RPDLRYQLGFSV-QNG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKI----------VHILSN--AVGEIHM 84 (90)
T ss_dssp ESSTTSCCCEEE-ETT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHH----------HHHHHH--CCEEEEE
T ss_pred eCCCccccCeEe-cCC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEE
Confidence 444455566643 246 88999999999999 9999999999999995 45443 255542 4888999
Q ss_pred EEEeC
Q 007765 404 RVLRD 408 (590)
Q Consensus 404 ~V~R~ 408 (590)
+|.+.
T Consensus 85 ~v~p~ 89 (90)
T 1y7n_A 85 KTMPA 89 (90)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 98764
No 245
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.39 E-value=3.2e-07 Score=76.70 Aligned_cols=59 Identities=8% Similarity=0.104 Sum_probs=53.8
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.+ ++++.++++. +++.+.|++.|+
T Consensus 30 ~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 91 (97)
T 2jil_A 30 KSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEYD 91 (97)
T ss_dssp -CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 35788999999999999999 99999999999999999 9999999998 888899988774
No 246
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=6.1e-07 Score=75.01 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=46.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.+ +|+++ |++||+|++|||++|.++..- ++..++.....|+.+.|+|.|+++
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~GD~I~~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCEGDLIVEINQQNVQNLSHT--------EVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCSSCEEEEETTEECSSCCHH--------HHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEec--ccccCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHcCCCCCEEEEEEEECCC
Confidence 4899999988 36778 999999999999999886321 223556554458999999999875
No 247
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.39 E-value=2e-07 Score=77.05 Aligned_cols=57 Identities=14% Similarity=0.171 Sum_probs=52.5
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHH--HHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLK--HLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~--~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||+++.++. ++.++++. +++.+.|++.|+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 85 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARS 85 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 5789999999999999999999999999999999999 99999998 888899988774
No 248
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.39 E-value=7.7e-07 Score=95.25 Aligned_cols=87 Identities=13% Similarity=0.145 Sum_probs=74.4
Q ss_pred eeccEEEeeCCHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCCH
Q 007765 438 IFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL 517 (590)
Q Consensus 438 ~~~Gl~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~ 517 (590)
.++|+.++++++...+.++.+ ..++++|..|.+++||+.+|++.||+|++|||++|.+|
T Consensus 240 ~~lGv~~~~~~~~~a~~~gl~---------------------~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~ 298 (436)
T 4a8c_A 240 GLLGIKGTEMSADIAKAFNLD---------------------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF 298 (436)
T ss_pred ccCceEecccCHHHHHHhCCC---------------------CCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCH
Confidence 478999999998888887775 45789999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCCceEEEeCCC-eEEEEE
Q 007765 518 KHLCQLVENC-SSENLRFDLDDD-RVVVLN 545 (590)
Q Consensus 518 ~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~ 545 (590)
.++...+... +++.+++++.|+ +...+.
T Consensus 299 ~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 328 (436)
T 4a8c_A 299 AELRSRIATTEPGTKVKLGLLRNGKPLEVE 328 (436)
T ss_pred HHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 9999999864 578899999884 444443
No 249
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.38 E-value=3.6e-07 Score=74.86 Aligned_cols=58 Identities=12% Similarity=0.191 Sum_probs=51.8
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.++ .++.++++.. ++.+.+++.|+
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 85 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRE 85 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 3578999999999999999999999999999999999 8888888865 78888888775
No 250
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.38 E-value=4.2e-07 Score=77.87 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=46.0
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
.+++|..|.++|||+++ |++||+|++|||++|.+| .++ ..++.. ..+..+.|+|.|..
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv----------~~~i~~-~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEV----------MKLLKS-FGEDEIEMKVVSLL 104 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHHHHT-TTTSCEEEEEESCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh-CCCCeEEEEEEECC
Confidence 57889999999999999 999999999999999966 443 244432 34456899998853
No 251
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.38 E-value=4.3e-07 Score=75.01 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=50.7
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.+| +++||+|++|||+++. +++++.++++... +.+.+++.|+
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 82 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 82 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC-
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeC
Confidence 467899999999999999 9999999999999999 9999999998754 4788888774
No 252
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.38 E-value=4.6e-07 Score=73.75 Aligned_cols=60 Identities=7% Similarity=0.011 Sum_probs=47.8
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.....|+++.++|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA--------QVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEC
Confidence 367999999999999987 999999999999999976321 223555555558899999876
No 253
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.38 E-value=6.2e-07 Score=74.38 Aligned_cols=51 Identities=22% Similarity=0.232 Sum_probs=41.2
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCC
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG 376 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~ 376 (590)
..+|+.+.... + +...|++|..|.++|||+++ |++||+|++|||++|.++.
T Consensus 20 ~~~Gf~v~~~~-~---------~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~ 71 (94)
T 3kzd_A 20 DTYGFSLSSVE-E---------DGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN 71 (94)
T ss_dssp -CCSEEEEEEC-S---------SSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC
T ss_pred CCcCEEEEecC-C---------CCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 35788777652 1 11358999999999999999 9999999999999999753
No 254
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.38 E-value=3e-07 Score=82.41 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=54.9
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+|+++||+|++|||++|. ++.++.++++..+++.+.|++.|+
T Consensus 62 ~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 123 (139)
T 2vz5_A 62 TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 123 (139)
T ss_dssp TCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEEC
Confidence 457899999999999999999999999999999999 699999999987788899988774
No 255
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.38 E-value=2.6e-07 Score=77.19 Aligned_cols=57 Identities=14% Similarity=0.044 Sum_probs=46.4
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhcc-CCCCEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMK-KPNEKSLVRVL 406 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~-~~g~~v~l~V~ 406 (590)
..+++|..|.++|||++| |++||+|++|||++|. +|+++. ..+... ..|+.+.|.|-
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~----------~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVE----------SILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHH----------HHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHH----------HHHHHhhccCCeEEEEEe
Confidence 367899999999999999 9999999999999984 887654 555443 46888888774
No 256
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.38 E-value=6.3e-07 Score=74.09 Aligned_cols=61 Identities=25% Similarity=0.177 Sum_probs=47.7
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++..++. ..++.+.|+|.|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQE--------AVAALLK--CSLGTVTLEVGRIST 90 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--HCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEcccc
Confidence 369999999999999987 999999999999999875421 1112222 357889999999763
No 257
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.37 E-value=5.4e-07 Score=77.03 Aligned_cols=60 Identities=10% Similarity=0.150 Sum_probs=53.9
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhc--CCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENC--SSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~--~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.+ ++++.++++.+ +++.++|++.|.
T Consensus 31 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~ 95 (108)
T 3cbz_A 31 GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKS 95 (108)
T ss_dssp TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECC
T ss_pred CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeC
Confidence 35789999999999999999 99999999999999999 99999999988 566788888774
No 258
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.37 E-value=2.3e-07 Score=81.85 Aligned_cols=63 Identities=25% Similarity=0.366 Sum_probs=52.5
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+ +.++ ..++... .++.+.++|.|+|+...
T Consensus 32 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDV----------VSAIRAG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH----------HHHHHTT-CSEEEEEEECHHHHHHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhC-CCCEEEEEEEeCCcceE
Confidence 358999999999999999 99999999999999998 5543 3555444 77888999999887655
No 259
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.37 E-value=6e-07 Score=73.01 Aligned_cols=58 Identities=9% Similarity=0.136 Sum_probs=50.6
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcC-CCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCS-SENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~-~~~v~l~~~r 538 (590)
..+++|..|.+++||+.+| +++||+|++|||+++. +++++.++++.++ ++.+.+++.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 4568999999999999999 9999999999999998 5689999999875 6777777654
No 260
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.37 E-value=6.3e-07 Score=75.49 Aligned_cols=61 Identities=21% Similarity=0.181 Sum_probs=48.7
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.|+|.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ--------DAVDLFR--NAGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH--------HHHHHHH--TCCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEEeCCC
Confidence 469999999999999987 999999999999999987432 1223332 358899999999765
No 261
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.37 E-value=5e-07 Score=77.00 Aligned_cols=58 Identities=21% Similarity=0.194 Sum_probs=45.7
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+..+.. ........++++.|+|.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------CYALFKGANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHH----------HHHHHHSCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhCCCCeEEEEEEeC
Confidence 68999999999999987 9999999999999998754321 1112234567899999885
No 262
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.36 E-value=4.1e-07 Score=77.89 Aligned_cols=56 Identities=7% Similarity=0.011 Sum_probs=50.2
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
+++|..|.+++||+.+|+++||+|++|||++|. +++++.++++...++.++|++.|
T Consensus 45 ~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~ 102 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVS 102 (109)
T ss_dssp SCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEES
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEE
Confidence 458999999999999999999999999999999 67999999998777778888765
No 263
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=7.9e-08 Score=82.52 Aligned_cols=67 Identities=22% Similarity=0.252 Sum_probs=52.0
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEFSI 416 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~~v 416 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... +...+ ...++.+.|+|.|+++..++.+
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~v 103 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLR--------AVDLI--RHGGKKMRFLVAKSDVETAKKI 103 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHH--------HHHHH--HTCCSEEEEEEECCCHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCcceeEEE
Confidence 468999999999999987 9999999999999998654321 11222 2358899999999987655443
No 264
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=4.7e-07 Score=74.39 Aligned_cols=57 Identities=9% Similarity=0.306 Sum_probs=51.5
Q ss_pred ceEEEEEEeecccccc-ccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAG-YERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g-~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+. +++++||+|++|||+++. +|+++.++++.+++ .++|++.|+
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~ 84 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFKIVPS 84 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEECC
Confidence 4679999999999998 789999999999999999 99999999999877 888887664
No 265
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.36 E-value=3.6e-07 Score=75.29 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=52.4
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.++ +++.++++.. ++.+.|.+.|+
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~ 86 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGP 86 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEcc
Confidence 3578999999999999999999999999999999999 9999999986 77888888774
No 266
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.36 E-value=1.5e-07 Score=82.22 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=49.3
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.... ...++. ..++++.|+|.|+|+..+
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ--------AVNLLK--NASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH--------HHHHHH--HCCSEEEEEEECCTTSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCccce
Confidence 58999999999999976 9999999999999999874321 112332 347789999999886543
No 267
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=7.1e-07 Score=78.20 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=54.7
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcC-CCceEEEeCCCeEE
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCS-SENLRFDLDDDRVV 542 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~-~~~v~l~~~r~~~i 542 (590)
..+++|..|.++++|+.+| +++||+|++|||++|. +++++.++++.++ ++.+.|++.|+..+
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPL 108 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 4568999999999999999 9999999999999998 7899999999876 78899988876543
No 268
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.35 E-value=2.5e-07 Score=79.09 Aligned_cols=62 Identities=19% Similarity=0.200 Sum_probs=49.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.. .|+.+.|+|.|+++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQS--------DVVEVLRN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHH--------HHHHHHHH--HCSEEEEEEEECCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCcC
Confidence 469999999999999987 999999999999999986321 12234433 688999999998864
No 269
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.35 E-value=4.6e-07 Score=76.75 Aligned_cols=59 Identities=12% Similarity=0.059 Sum_probs=52.7
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
...+++|..|.+++||+.+|+++||+|++|||+++.+ |+++.+.++..+++.+.+++.|
T Consensus 43 ~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R 103 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTR 103 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEc
Confidence 4678999999999999999999999999999999965 7799999988788888888765
No 270
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.35 E-value=6.6e-07 Score=74.76 Aligned_cols=56 Identities=13% Similarity=0.201 Sum_probs=49.7
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeec--CCHHHHHHHHHh--cCCCceEEEeC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEI--ENLKHLCQLVEN--CSSENLRFDLD 537 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~--~~~~~v~l~~~ 537 (590)
...+|.+|.+++||+.+|+++||+|++|||++| .+|+++.+.+++ ++++.+.|.+.
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 356899999999999999999999999999997 599999999998 47888877653
No 271
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.35 E-value=5.8e-07 Score=76.10 Aligned_cols=60 Identities=20% Similarity=0.234 Sum_probs=48.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.... +...+ ...++.+.++|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ--------AAIAL--KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHH--------HHHHH--HTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECcc
Confidence 48999999999999987 9999999999999998876432 11222 2468899999999753
No 272
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=4.1e-07 Score=76.63 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=46.5
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
.+++|..|.++|||+++ |++||+|++|||++|.+|..- ++..++.. .++++.|+|.|++
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~~ 95 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCV--------ELAHEIRS--CPSEIILLVWRVS 95 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHH--------HHHHHHHH--CSSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECC
Confidence 57889999999999999 999999999999999976321 12234432 3567999999975
No 273
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.34 E-value=5.3e-07 Score=76.71 Aligned_cols=64 Identities=8% Similarity=0.015 Sum_probs=50.6
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCCC-eEEEEE
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDDD-RVVVLN 545 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~ 545 (590)
.++.+..+.|+++++.+|+++||+|++|||++|.+|.+|.++++.. +++.+.|++.|+ +.+.+.
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~ 102 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVY 102 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEE
Confidence 3455555555556688999999999999999999999999999874 577899998874 555444
No 274
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=3.6e-07 Score=77.42 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=52.7
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+++++||+|++|||++|.+ ++++.++++.. ++.+.|++.|+
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 87 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRA 87 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEEC
Confidence 47889999999999999999999999999999999 99999999987 88888888875
No 275
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=6.9e-07 Score=78.26 Aligned_cols=62 Identities=13% Similarity=0.078 Sum_probs=50.3
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.....|+.+.|+|.|++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA--------DVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH--------HHHHHHHTSCTTCEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCC
Confidence 368999999999999987 999999999999999865321 23355655556899999999986
No 276
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.34 E-value=7.3e-07 Score=77.55 Aligned_cols=60 Identities=20% Similarity=0.285 Sum_probs=48.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.+|.+.. ........++.+.|+|.|++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCeEEEEEEECCc
Confidence 68999999999999987 9999999999999999986432 222223468899999998753
No 277
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.33 E-value=3.4e-07 Score=76.12 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=52.9
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||+++.++ .++.++++..+ +.+.|++.|+
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 88 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRS 88 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEEC
Confidence 4578999999999999999999999999999999998 99999999876 8899988875
No 278
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.33 E-value=8.1e-07 Score=76.47 Aligned_cols=61 Identities=15% Similarity=0.143 Sum_probs=48.8
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++... ++..++. ..|+.+.|+|.|+++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHS--------RAIELIK--NGGRRVRLFLKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TTTTEEEEEEECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCcc
Confidence 68999999999999987 999999999999999987432 1112332 3688999999998764
No 279
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.33 E-value=5e-07 Score=75.65 Aligned_cols=59 Identities=8% Similarity=0.157 Sum_probs=53.1
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.++ .++.++++. +++.+.|++.|+
T Consensus 35 ~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 96 (98)
T 1ihj_A 35 KTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTF 96 (98)
T ss_dssp CEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeC
Confidence 45689999999999999999 999999999999999997 889999987 788899888774
No 280
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.33 E-value=1.6e-06 Score=76.21 Aligned_cols=67 Identities=15% Similarity=0.170 Sum_probs=57.6
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCCeEEEEEech
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDDRVVVLNYDV 548 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~~~i~l~~~~ 548 (590)
...+++|..|.+++||+.+ +++||+|++|||++|.+|.+|.+++.. .+++.+.|++ |+..+.+.+..
T Consensus 23 ~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~~~v~l~~ 90 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGTFHLKTGR 90 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEEEEEECCB
T ss_pred CCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCEEEEEEec
Confidence 4467899999999999999 999999999999999999999999986 5688999999 85336666554
No 281
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.32 E-value=3.8e-07 Score=80.60 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=58.2
Q ss_pred cccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHH
Q 007765 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHL 391 (590)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~ 391 (590)
..|||.+....+... ++ ...|++|..|.++|||+++ |++||+|++|||+++.+ +.+ +..+
T Consensus 27 ~~lG~~i~~~~~~~~---~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH---TG---EASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHD----------VVEV 90 (129)
T ss_dssp CCCCEEEEEECCCSS---SC---CCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHH----------HHHH
T ss_pred CCcCEEEEeecCCcc---cC---CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 347777765421110 11 2478999999999999987 99999999999999998 443 2345
Q ss_pred hhccCCCCEEEEEEEeCCEEE
Q 007765 392 VSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 392 ~~~~~~g~~v~l~V~R~g~~~ 412 (590)
+.. .++.+.|+|.|+|+..
T Consensus 91 l~~--~~~~v~l~v~R~~~~~ 109 (129)
T 2dmz_A 91 LRN--AGQVVHLTLVRRKTSS 109 (129)
T ss_dssp HHH--CCSSEEEEEEEESSSS
T ss_pred HHc--CCCeEEEEEEeCCccc
Confidence 544 7889999999988654
No 282
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.32 E-value=1e-07 Score=82.73 Aligned_cols=97 Identities=19% Similarity=0.227 Sum_probs=64.6
Q ss_pred hHHHHHHHHHHHHcCccc------c-ccccccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEE
Q 007765 296 VPVIKHFITGVVEHGKYV------G-FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILA 366 (590)
Q Consensus 296 ~~~i~~~l~~l~~~g~~~------~-~~~lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~ 366 (590)
.+.+...+..+....... + ...+|+.+..... -.....|++|..|.++|||+++ |++||+|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~--------~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ 76 (117)
T 2o2t_A 5 CDEFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRS--------ENRGELGIFVQEIQEGSVAHRDGRLKETDQILA 76 (117)
T ss_dssp CHHHHHHHHHHHTTSCEEEEEEECCSSSCSSCCEEEEEC--------CC--CEEEEECCCCTTSHHHHHCCCCTTCEEEE
T ss_pred hHHHHHHHHhhccCCeEEEEEEEECCCCCCCEEEeeccc--------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEE
Confidence 345566666655433321 0 1346776654311 0111368999999999999987 999999999
Q ss_pred ECCEEec---CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 367 FDGVPIA---NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 367 VnG~~v~---~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
|||+++. ++.++ ..++.. .|+.+.|+|.|+++..
T Consensus 77 ing~~v~~~~~~~~~----------~~~l~~--~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 77 INGQALDQTITHQQA----------ISILQK--AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp ETTEECCTTSCHHHH----------HHHHHH--CCSEEEEEEESSCCGG
T ss_pred ECCEECCCCCCHHHH----------HHHHHc--CCCEEEEEEEeCCcce
Confidence 9999998 44432 234433 6889999999988654
No 283
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.32 E-value=3.9e-07 Score=79.78 Aligned_cols=61 Identities=21% Similarity=0.268 Sum_probs=51.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.+++|..|.+++||+++ |++||+|++|||++|.+ +.++ ..++.....|+.+.|+|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEA----------NQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHH----------HHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEECCcc
Confidence 56899999999999988 99999999999999987 5543 35665555589999999998753
No 284
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.31 E-value=7.7e-07 Score=75.12 Aligned_cols=63 Identities=17% Similarity=0.138 Sum_probs=49.8
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++...+. ..|+.+.|+|.|+++..
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHS--------RAVEALK--EAGPVVRLVVRRRQPPP 97 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH--------HHHHHHH--HSCSEEEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCCCC
Confidence 469999999999999987 999999999999999875432 1113332 26899999999987653
No 285
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.31 E-value=1.1e-06 Score=74.21 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=52.3
Q ss_pred ceEEEEEEeecccccc-ccccCCceEEeeCCeec--CCHHHHHHHHHhc-CCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAG-YERFADLQVKKVNGVEI--ENLKHLCQLVENC-SSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g-~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~~-~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+. .+++.||+|++|||+++ .+++++.++++.. +++.++|++.|.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4679999999999998 56999999999999999 9999999999986 678899988774
No 286
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.31 E-value=8.4e-07 Score=73.93 Aligned_cols=61 Identities=16% Similarity=0.228 Sum_probs=48.5
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.|+|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK--------QAVETLR--NTGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--SCCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEcCCC
Confidence 368999999999999987 999999999999999976321 1223333 268899999999764
No 287
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.31 E-value=9.3e-07 Score=75.62 Aligned_cols=58 Identities=12% Similarity=0.206 Sum_probs=46.6
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.. .++.+.|+|.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR--------QVVNMIRQ--GGNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--TTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCEEEEEEEEC
Confidence 58999999999999999 999999999999999998321 12244433 478899999873
No 288
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=7.5e-07 Score=77.34 Aligned_cols=61 Identities=18% Similarity=0.195 Sum_probs=47.4
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+.... ++..++.. .++++.|+|.|+|+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHE--------EAVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCcc
Confidence 58999999999999987 999999999999999954321 12233332 456799999998865
No 289
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.29 E-value=5.7e-07 Score=78.99 Aligned_cols=58 Identities=17% Similarity=0.154 Sum_probs=50.4
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHh-cCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||++|.++ +++.+++.. .+++.+.|++.|+
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 578999999999999999999999999999999999 999998887 5666676666553
No 290
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.29 E-value=5.9e-07 Score=75.20 Aligned_cols=56 Identities=11% Similarity=0.198 Sum_probs=49.5
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|++|.+++||+.+| +++||+|++|||++|.+ |+++.++++.. ++.++|++.+
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~ 94 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIP 94 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 578999999999999999 99999999999999996 99999999975 5567776654
No 291
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.29 E-value=1.3e-06 Score=75.10 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=54.3
Q ss_pred cceEEEEEEeeccccccccc-cCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYER-FADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~-~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+ ++||+|++|||+++.+ ++++.++++..+++.+.+.+.|+
T Consensus 25 ~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 86 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRG 86 (112)
T ss_dssp SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEEC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeC
Confidence 35789999999999999998 9999999999999999 99999999998889999999874
No 292
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.29 E-value=1.8e-06 Score=81.80 Aligned_cols=72 Identities=19% Similarity=0.309 Sum_probs=57.9
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe---CCEEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR---DGKEHEFSI 416 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R---~g~~~~~~v 416 (590)
..|++|..|.++|||++.|++||+|++|||+++.+..+.. ....+ ...++.+.|+|.| +|+..++.+
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~~G~~~~~~v 92 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREVGNGAKQEIRV 92 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHH--------HHHHH--HHCCSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEEcCCCCCCceeEe
Confidence 4799999999999999889999999999999999875321 11222 2346799999999 999988888
Q ss_pred EEecC
Q 007765 417 TLRLL 421 (590)
Q Consensus 417 ~l~~~ 421 (590)
.+...
T Consensus 93 ~~~~~ 97 (195)
T 2qbw_A 93 RVEKD 97 (195)
T ss_dssp EEECC
T ss_pred Eeecc
Confidence 87643
No 293
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=2.8e-07 Score=78.09 Aligned_cols=63 Identities=19% Similarity=0.229 Sum_probs=48.8
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..+++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.....|+.+.|+|.|++.
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHR--------YVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHH--------HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCcEEEEEEeCCC
Confidence 368999999999999987 999999999999999774321 122444433337899999999764
No 294
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=9.1e-07 Score=75.60 Aligned_cols=60 Identities=8% Similarity=0.215 Sum_probs=54.1
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.++ +++||+|++|||+++.+ ++++.++++.++++.++|++.|+
T Consensus 42 ~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 42 TRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp TCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 46789999999999999999 99999999999999965 89999999998777888888774
No 295
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.29 E-value=5.1e-07 Score=78.54 Aligned_cols=58 Identities=16% Similarity=0.228 Sum_probs=53.3
Q ss_pred cceEEEEEEee--ccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLM--DDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~--~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+ ++||+.+|+++||+|++|||++|.+| ++|.++++.. ++.+.|++.|+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~ 104 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHD 104 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEEC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 46899999999 99999999999999999999999999 9999999988 88888888764
No 296
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=9.7e-07 Score=75.23 Aligned_cols=60 Identities=23% Similarity=0.276 Sum_probs=47.4
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... +..++. ..++.+.|+|.|++
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQ--------AVEAFK--TAKEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHH--------HHHHHH--HCCSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCcEEEEEEeCC
Confidence 479999999999999987 9999999999999998754321 112332 25788999999865
No 297
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=1.3e-06 Score=73.47 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=48.7
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+++++||+|++|||++|.++ .++.+.++. ++.+.|++.|+
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~ 93 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRM 93 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEEC
Confidence 578999999999999999999999999999999994 777777765 67888888764
No 298
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.28 E-value=1.1e-06 Score=73.20 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=51.4
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||+++.+ ++++.++++.+ ++.+.|++.++
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS-GNVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEEC
Confidence 468899999999999999999999999999999999 69999999987 44788777553
No 299
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.28 E-value=2.2e-06 Score=75.76 Aligned_cols=61 Identities=8% Similarity=0.110 Sum_probs=53.9
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcC-CCceEEEeCCCeE
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCS-SENLRFDLDDDRV 541 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~-~~~v~l~~~r~~~ 541 (590)
..+++|..|.++++|+.+| ++.||+|++|||++|. ++.++.++++..+ ++.++|++.|+..
T Consensus 42 ~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 42 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 3568999999999999999 9999999999999998 5789999999987 7788888887653
No 300
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.27 E-value=1.1e-06 Score=73.73 Aligned_cols=57 Identities=11% Similarity=-0.017 Sum_probs=51.9
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||+++. ++.++.++++ .+++.+.|++.|+
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~ 92 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL-KSGNKISLRTTAL 92 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEECS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEEC
Confidence 3678999999999999999999999999999999 8999999998 5788899988874
No 301
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.27 E-value=5.1e-07 Score=77.64 Aligned_cols=56 Identities=25% Similarity=0.295 Sum_probs=45.5
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
.+++|..|.+++||+++ |++||+|++|||++|. +|.++. .++.. ..++.+.|+|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~----------~~i~~-~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVM----------KLLKS-FGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHH----------HHHHH-TTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh-CCCceEEEEEEe
Confidence 57889999999999999 9999999999999999 666542 45533 346678888876
No 302
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.27 E-value=9.7e-07 Score=76.64 Aligned_cols=61 Identities=15% Similarity=0.128 Sum_probs=48.2
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+...- ++..++. ..|+.+.|+|.|+++
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHE--------EAVAILK--NTSEVVYLKVGKPTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCc
Confidence 468999999999999987 999999999999999954321 1223333 358899999999765
No 303
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.26 E-value=4.1e-06 Score=74.15 Aligned_cols=60 Identities=8% Similarity=0.157 Sum_probs=52.7
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhc-CCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENC-SSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~-~~~~v~l~~~r~ 539 (590)
+..+++|..|.++++|+.+| +++||+|++|||+++.+ ++++.++++.+ +++.++|++.|+
T Consensus 63 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 63 GRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp SCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 34688999999999999999 99999999999999975 69999999987 667888887663
No 304
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.26 E-value=4.7e-07 Score=77.87 Aligned_cols=56 Identities=9% Similarity=0.075 Sum_probs=50.3
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
+++|..|.++++|+.+|++.||+|++|||++|. +|+++.++++...++.+.|++.+
T Consensus 37 ~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp SCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 457889999999999999999999999999999 99999999998877777777655
No 305
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.26 E-value=1.2e-06 Score=77.67 Aligned_cols=62 Identities=19% Similarity=0.275 Sum_probs=50.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.+++||+++ |++||+|++|||+++.+...- ++..++.....++.+.|+|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFE--------EVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHH--------HHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcCCCCEEEEEEEcCCC
Confidence 58999999999999987 999999999999999875321 233556555578999999999763
No 306
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=8.2e-07 Score=77.09 Aligned_cols=59 Identities=22% Similarity=0.320 Sum_probs=47.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.+++|..|.+++||+++ |++||+|++|||+++.+ +.++ ..++. ..|+.+.|+|.|+++.
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~----------~~~l~--~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEA----------TKLLA--SISEKVRLEILPVPQS 104 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHH----------HHHHH--SCSSEEEEEECCBTTB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHH--hCCCeEEEEEEECCCC
Confidence 35999999999999997 99999999999999954 4433 24554 3789999999997753
No 307
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.26 E-value=6.1e-07 Score=73.83 Aligned_cols=61 Identities=18% Similarity=0.300 Sum_probs=46.2
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
.+++|..|.++|||+++ |++||+|++|||+++.+.... ++..++.....++.+.|+|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~--------~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQ--------LVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHH--------HHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEecc
Confidence 57899999999999987 999999999999999654321 12244443333558999999864
No 308
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=5.5e-07 Score=76.58 Aligned_cols=62 Identities=16% Similarity=0.283 Sum_probs=48.1
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..++.+.++|.|++..
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHE--------EVVEKVK--KSGSRVMFLLVDKETD 93 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHH--------HHHHHHH--HHCSEEEEEECCTTTS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEEcCchh
Confidence 368999999999999999 999999999999999876432 1112332 2478899999986643
No 309
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.25 E-value=9.4e-07 Score=72.56 Aligned_cols=58 Identities=14% Similarity=0.109 Sum_probs=49.8
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++. ++.++.++++.. ++.+.+++.|+
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 85 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRA 85 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeC
Confidence 35789999999999999999999999999999999 568888888765 66788877663
No 310
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=1.2e-06 Score=74.66 Aligned_cols=62 Identities=16% Similarity=0.206 Sum_probs=48.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++..++.. .|+.+.|+|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK--------QAVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTS--------HHHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCcc
Confidence 478999999999999987 999999999999999954322 12233332 589999999998764
No 311
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=4.8e-07 Score=78.13 Aligned_cols=58 Identities=24% Similarity=0.242 Sum_probs=48.8
Q ss_pred ceEEEEeCCCChhhh-c-cCCCCEEEEECCEEecCC--CcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 342 GVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAND--GTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 342 gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~~~--~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
+++|..|.++|||++ + |++||+|++|||+++.++ .++ ..++.. .++.+.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADI----------VKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHH----------HHHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEEEEEeCCcC
Confidence 679999999999999 8 999999999999999985 433 355543 789999999998764
No 312
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.25 E-value=1.3e-06 Score=74.14 Aligned_cols=56 Identities=14% Similarity=0.135 Sum_probs=51.4
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+++++||+|++|||++|.+ ++++.++++. ++.+.|++.|+
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~v~l~v~r~ 98 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AREISMRVRFF 98 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SSSEEEEEECC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCEEEEEEEEC
Confidence 56899999999999999999999999999999999 9999999998 67888888775
No 313
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.25 E-value=1e-06 Score=75.35 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=47.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccC-CCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKK-PNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~-~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+...- ++..++.... .+..+.|+|.|+++.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSND--------DAVRVLRDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHH--------HHHHHHHHHHTSSSCEEEEEECCCC-
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcccCCCeEEEEEEeCCCC
Confidence 478999999999999987 999999999999999984211 1224454331 244699999997653
No 314
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.24 E-value=6.9e-07 Score=75.63 Aligned_cols=59 Identities=8% Similarity=0.182 Sum_probs=52.2
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcC-CCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.++ +++||+|++|||++|.+ ++++.++++..+ ++.++|++.|+
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 95 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRK 95 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeC
Confidence 3567899999999999999 99999999999999955 899999999876 78888888764
No 315
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.24 E-value=6.1e-07 Score=75.81 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..|+.+.|+|.|+++.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHA--------RAIELIK--SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHH--------HHHHHHH--HHCSEECEEEECTTCS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEECCCC
Confidence 48999999999999987 999999999999999987432 1122332 3588999999998753
No 316
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.24 E-value=8.6e-07 Score=77.54 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=52.9
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcC-CCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
..++|..|.+++||+.++ +++||+|++|||++|.+ ++++.++++..+ ++.++|++.|+
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 106 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFD 106 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEE
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEEC
Confidence 457899999999999999 99999999999999988 999999999987 88898888774
No 317
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.23 E-value=1.2e-06 Score=76.76 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=48.1
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+..+.. ...++. ..++.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQN--------ASAIIK--TAPSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHH--------HHHHHH--HSCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCc
Confidence 68999999999999986 9999999999999998765421 112222 3467999999998754
No 318
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.23 E-value=2e-06 Score=74.12 Aligned_cols=57 Identities=21% Similarity=0.299 Sum_probs=48.1
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHHH--HHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKH--LCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~--l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.++++|+.+++++||+|++|||++|.+|.+ +.++++.. +.+.+++.|+
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~ 98 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAA 98 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcC
Confidence 357899999999999999999999999999999999965 77777754 5677777654
No 319
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.23 E-value=1.5e-06 Score=74.48 Aligned_cols=58 Identities=9% Similarity=0.032 Sum_probs=52.9
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcC---CCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCS---SENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~---~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.++ ++.||+|++|||+++.+ +++++++|+.++ ++.++|++.|+
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~ 104 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRS 104 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeC
Confidence 368999999999999999 99999999999999988 999999999988 77888888774
No 320
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.23 E-value=1.5e-06 Score=72.21 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=47.8
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..|++|..|.++|||++.|++||+|++|||+++.++.+.. +...+ ...++.+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHH--------HHHHH--HHCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHH--------HHHHh--hcCCCeEEEEEEeCC
Confidence 4699999999999998889999999999999998865321 11222 246889999999864
No 321
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.23 E-value=1.8e-06 Score=70.99 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=45.2
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.... +..++ ...++.+.|+|.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQAL--KKTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHH--------HHHHH--HTCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCeEEEEEEE
Confidence 58999999999999986 9999999999999999764321 11222 2357889999987
No 322
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.23 E-value=1.1e-06 Score=74.74 Aligned_cols=60 Identities=20% Similarity=0.242 Sum_probs=46.6
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++..- ++..++. ..|+.+.|+|.|.+.
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHK--------QVVDLIR--AGEKELILTVLSVES 103 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHH--HCSSEEEEEEECSSC
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCEEEEEEEcCCC
Confidence 34579999999999999 999999999999999954221 1224443 358899999999654
No 323
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.22 E-value=2.1e-06 Score=73.61 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.. .|+.+.|+|.|++..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSE--------QVAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHH--------HHHHHHHH--HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEeCCCC
Confidence 68999999999999987 999999999999999976421 12234433 478999999997654
No 324
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.22 E-value=2.3e-06 Score=75.63 Aligned_cols=61 Identities=7% Similarity=0.005 Sum_probs=49.8
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++..- ++..++.....|+.+.|+|.|++
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA--------QVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHH--------HHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCC
Confidence 57899999999999987 999999999999999875421 23356655555899999999976
No 325
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=1.3e-06 Score=72.18 Aligned_cols=56 Identities=18% Similarity=0.272 Sum_probs=49.8
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeec-CCHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI-ENLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v-~~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.++ +++||+|++|||+++ .+++++.++++.. ++.+.|++.|
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~-~~~v~l~v~~ 86 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA-SGSVILKILS 86 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-CSSBCEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 568999999999999986 999999999999999 9999999999974 6677777765
No 326
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=2.6e-07 Score=81.38 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=48.6
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||++|. ++.++ ..++.. .|+.+.|+|.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQV----------IALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHH----------HHHHHT--CTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCEEEEEEEECCC
Confidence 367999999999999999 9999999999999998 44433 244543 48999999999775
No 327
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.22 E-value=2.3e-06 Score=70.88 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=45.2
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEe
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~ 536 (590)
.++++|.+|.+++||+.+|+++||+|++|||++|. +|+++.+++++ +.+++++
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~l~ltV 88 (94)
T 3kzd_A 34 IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLV 88 (94)
T ss_dssp SCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---SEEEEEE
T ss_pred cCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CeEEEEE
Confidence 46789999999999999999999999999999998 57999998874 3444443
No 328
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.22 E-value=1.4e-06 Score=75.99 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=52.3
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcC-CCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|.+ ++++.++++..+ ++.+.|++.|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 4678999999999999999 99999999999999988 689999999864 77888887664
No 329
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.21 E-value=8.7e-07 Score=76.30 Aligned_cols=65 Identities=12% Similarity=0.227 Sum_probs=51.0
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHEF 414 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~~ 414 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++.... +..++. ..|+.+.|+|.|+++..++
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~~~~ 100 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLR--NTKGRVRFMIGRERPGEQS 100 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH--------HHHHHH--HSCSSCEEEEEECCCCTTS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCeEEEEEEeCCCCCcc
Confidence 469999999999999987 9999999999999998764321 112332 2488999999999875443
No 330
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.1e-06 Score=74.80 Aligned_cols=61 Identities=13% Similarity=0.202 Sum_probs=48.4
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... +..++. ..++.+.|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF--------AATVLR--NTKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH--------HHHHHH--HCCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCeEEEEEEeCCC
Confidence 468999999999999987 9999999999999998765321 112332 258899999999654
No 331
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.21 E-value=2.1e-06 Score=70.68 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=50.6
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.+ +.++.++++...++.+.+.+.|+
T Consensus 26 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 26 KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE 86 (91)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCC
Confidence 357899999999999999999999999999999998 78999999987766555665554
No 332
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.21 E-value=1.2e-06 Score=71.70 Aligned_cols=57 Identities=9% Similarity=0.094 Sum_probs=46.8
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHh-cCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
..++++..+ +++||+ +++++||+|++|||+++.++ +++.+++++ .+++.+.|++.|+
T Consensus 26 ~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 85 (88)
T 3bpu_A 26 GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQ 85 (88)
T ss_dssp SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEE
T ss_pred CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeC
Confidence 357788887 999999 89999999999999999997 899999985 4677888887663
No 333
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.9e-06 Score=74.66 Aligned_cols=61 Identities=20% Similarity=0.323 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++... ++..++. ..++.+.|+|.|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~--~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE--------EVQSIIS--QQSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH--------HHHHHHS--CCSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH--------HHHHHHh--cCCCEEEEEEEECCcc
Confidence 58999999999999987 999999999999999875432 1223332 3678899999998763
No 334
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.1e-06 Score=74.73 Aligned_cols=61 Identities=20% Similarity=0.300 Sum_probs=47.6
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++..++. ..++.+.|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHD--------HAVSLLT--AASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHH--------HHHHHHT--SCCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEECCC
Confidence 368999999999999987 999999999999999884321 1223332 248889999999653
No 335
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.20 E-value=1.7e-06 Score=72.09 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=51.3
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||+++. ++.++.++++. .++.+.|.+.|+
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 92 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKG 92 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcC
Confidence 4578999999999999999 9999999999999999 67899988887 577888888775
No 336
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.20 E-value=2e-06 Score=72.59 Aligned_cols=57 Identities=12% Similarity=0.119 Sum_probs=51.0
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
..+++|..|.+++||+.+|+++||+|++|||++|.+ ++++.++++. .++.+.|++.|
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r 87 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLD 87 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE
Confidence 457899999999999999999999999999999998 5899999887 47788888866
No 337
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.20 E-value=1.1e-06 Score=77.19 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=52.5
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhc-CCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENC-SSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~-~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+| +++||+|++|||++|. +++++.++|+.. +++.++|++.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 456899999999999999 9999999999999995 899999999984 588899998887
No 338
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.20 E-value=9.9e-07 Score=72.56 Aligned_cols=58 Identities=7% Similarity=0.161 Sum_probs=50.8
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCC-CceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSS-ENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~-~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+| +++||+|++|||+++ .++.++.++++..++ +.++|++.|.
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 458999999999999999 999999999999999 679999999998764 4788887664
No 339
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=1.4e-06 Score=75.85 Aligned_cols=62 Identities=21% Similarity=0.152 Sum_probs=49.2
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
..|++|..|.++|||+++ |++||+|++|||++|.++.... +..++.. .++.+.|+|.|+++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHH--------HHHHHHH--HCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcC
Confidence 469999999999999987 9999999999999999876321 1133322 478999999997663
No 340
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=1.3e-06 Score=73.47 Aligned_cols=59 Identities=17% Similarity=0.158 Sum_probs=46.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++ .. ++..++. ..++.+.|+|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~--------~~~~~~~--~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQ--------EALILIK--GSFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SH--------HHHHHHH--TCCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HH--------HHHHHHH--hCCCeEEEEEEeCCC
Confidence 47899999999999997 999999999999999985 21 1113332 247889999999875
No 341
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.19 E-value=1.1e-06 Score=71.43 Aligned_cols=57 Identities=16% Similarity=0.174 Sum_probs=48.6
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+++++||+|++|||+++.++ .++.+.++.. ++.+.+++.|+
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~ 83 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA-SYNLSLTLQKS 83 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTC-SSCEEEEEESC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 467899999999999999999999999999999998 7878777754 45688888764
No 342
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.19 E-value=1.6e-06 Score=76.46 Aligned_cols=60 Identities=25% Similarity=0.276 Sum_probs=46.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEec-CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA-NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~-~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.+++||+++ |++||+|++|||++|. +...- ++..++.. .++.+.|+|.|++.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~~l~~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQ--------QAIALLQQ--TTGSLRLIVAREPV 116 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHH--------HHHHHHHH--CCSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHH--------HHHHHHHc--CCCeEEEEEEcCCC
Confidence 58999999999999987 9999999999999997 33211 12234433 67899999999753
No 343
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.19 E-value=6.5e-06 Score=68.74 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=49.2
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+| +++||+|++|||+++.+ +.++.++++... +.+.+++.|+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 89 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcC
Confidence 578999999999999999 99999999999999988 568888887654 7788888764
No 344
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.18 E-value=7.8e-07 Score=72.02 Aligned_cols=56 Identities=20% Similarity=0.248 Sum_probs=48.9
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+++|..|.+++||+.+++++||+|++|||+++.+| +++.++++.. ++.++|++.|+
T Consensus 24 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 81 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC-SGVLHMVIAEG 81 (83)
T ss_dssp SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSCEEEEEECC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 46788899999999999999999999999999999 8999888765 45688887764
No 345
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.18 E-value=1.6e-06 Score=72.36 Aligned_cols=60 Identities=13% Similarity=0.137 Sum_probs=50.4
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+|+++||+|++|||++|.++.++..+... .+++.+.|++.|+
T Consensus 32 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 92 (97)
T 2w4f_A 32 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRE 92 (97)
T ss_dssp TBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeC
Confidence 45678999999999999999999999999999999998886544332 3788899988874
No 346
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.18 E-value=2.1e-06 Score=73.59 Aligned_cols=59 Identities=12% Similarity=0.137 Sum_probs=52.0
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhc-CCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENC-SSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~-~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|.+ ++++.++++.. +++.+.|++.|+
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 100 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQ 100 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEEC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4678999999999999999 99999999999999965 58999999986 477888888764
No 347
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=75.41 Aligned_cols=58 Identities=7% Similarity=0.172 Sum_probs=52.9
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC---CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE---NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~---~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||+++. ++.++.++++. .++.+.|++.|+
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~ 109 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIARG 109 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 4689999999999999999 9999999999999999 99999999987 577888888774
No 348
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.18 E-value=2.1e-06 Score=71.09 Aligned_cols=57 Identities=11% Similarity=0.285 Sum_probs=50.4
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
..+++|.+|.+++||+.+| ++.||+|++|||+++ .+++++.++++...+ .++|++.+
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 86 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIP 86 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEe
Confidence 3567999999999999999 999999999999999 999999999988665 77777655
No 349
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.18 E-value=2.6e-06 Score=70.77 Aligned_cols=58 Identities=9% Similarity=0.101 Sum_probs=49.2
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+. ++++||+|++|||+++.+ +.++...++ ..++.+.|++.|+
T Consensus 33 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 92 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVRE 92 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH-HCCSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh-cCCCeEEEEEEeC
Confidence 456899999999999999 999999999999999988 667777776 4577888887664
No 350
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.18 E-value=1.4e-06 Score=74.24 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=52.2
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||++|.+ +.++.++++. .++.+.|++.|+
T Consensus 42 ~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~ 103 (108)
T 2jre_A 42 EATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRR 103 (108)
T ss_dssp CCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 44678999999999999999 99999999999999998 7899998887 778888888664
No 351
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.18 E-value=9.7e-05 Score=70.33 Aligned_cols=170 Identities=16% Similarity=0.180 Sum_probs=102.4
Q ss_pred HHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEe-CCeEEEcCcccCCC-cEEEEEEcCCCcEEEEE-----EEE
Q 007765 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADS-TFVLVRKHGSPTKYRAQ-----VEA 182 (590)
Q Consensus 110 ~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~-~g~IlT~aHvv~~~-~~i~V~~~~~~~~~~a~-----vv~ 182 (590)
.-+.+.|++|...... ...+=+=|. ..||+|++|..... ..+.|+.. .| .|... -+.
T Consensus 20 n~Ia~~ic~l~n~sdg--------------~~~~l~gigyG~~iItn~HLf~~nnG~L~I~s~-hG-~f~v~nt~~lki~ 83 (229)
T 1lvm_A 20 NPISSTICHLTNESDG--------------HTTSLYGIGFGPFIITNKHLFRRNNGTLLVQSL-HG-VFKVKNTTTLQQH 83 (229)
T ss_dssp HHHHTTEEEEEEEETT--------------EEEEEEEEEETTEEEECGGGGGCCSSEEEEEET-TE-EEEESCGGGSEEE
T ss_pred ChhheEEEEEEeccCC--------------ceEEEEEEeECCEEEeChhhhccCCCcEEEEeC-CC-eEEeCCCCceeeE
Confidence 3455788888875321 122222233 88999999999854 67788764 22 33321 234
Q ss_pred ecCCCCeEEEEecCCcccCcceeEEcC---CCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcc
Q 007765 183 VGHECDLAILIVESDEFWEGMHFLELG---DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDA 259 (590)
Q Consensus 183 ~d~~~DlAlLkv~~~~~~~~~~~~~l~---~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~ 259 (590)
.-+..||.+||++.. ++|.+-. ..+..+|.|.++|.-+.....+. .||.........+. .++..-.
T Consensus 84 ~i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~~s---~vSesS~i~p~~~~---~fWkHwI 152 (229)
T 1lvm_A 84 LIDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERICLVTTNFQTKSMSS---MVSDTSCTFPSSDG---IFWKHWI 152 (229)
T ss_dssp ECTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEEEEEEECSSSSCEE---EECCCEECEEETTT---TEEEECB
T ss_pred EeCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEEEEEeEeecCCccE---EECCcceeEecCCC---CEeEEEe
Confidence 456899999999864 4443322 35577999999997654332221 23321111111111 2344445
Q ss_pred cccCCCCCceEE--eCCEEEEEEeeecCCCCceeEEeehHH-HHHHHHHHH
Q 007765 260 AINPGNSGGPAI--MGNKVAGVAFQNLSGAENIGYIIPVPV-IKHFITGVV 307 (590)
Q Consensus 260 ~i~~G~SGGPl~--~~G~vVGI~~~~~~~~~~~~~aip~~~-i~~~l~~l~ 307 (590)
....|+-|.|++ .||.+|||.+..... ...+|+.|++. +.++|+...
T Consensus 153 sT~~G~CGlPlVs~~Dg~IVGiHsl~~~~-~~~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 153 QTKDGQCGSPLVSTRDGFIVGIHSASNFT-NTNNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp CCCTTCTTCEEEETTTCCEEEEEEEEETT-SCSEEEEECCTTHHHHHHCGG
T ss_pred eCCCCcCCCcEEECCCCcEEEEEcccccC-CCeEEEeCCCHHHHHHHhccc
Confidence 667899999999 899999999987643 23466666532 237776543
No 352
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.17 E-value=1.3e-06 Score=75.36 Aligned_cols=58 Identities=12% Similarity=0.149 Sum_probs=50.5
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||++|.++ .++.++++.. ++.+.|++.|+
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 96 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDG 96 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEEC
Confidence 4567999999999999999999999999999999884 8999999874 77777777663
No 353
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=1.4e-06 Score=73.96 Aligned_cols=59 Identities=17% Similarity=0.269 Sum_probs=52.0
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+..+++|..|.+++||+.++ +++||+|++|||+++.+ +.++.++++.. ++.+.|++.|+
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (105)
T 1wha_A 36 GDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLERE 97 (105)
T ss_dssp TCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEEC
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 35678999999999999999 99999999999999988 99999999876 77788887664
No 354
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=1.7e-06 Score=75.04 Aligned_cols=59 Identities=12% Similarity=0.184 Sum_probs=52.7
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.+| +++||+|++|||+++. ++.++.++++.. ++.++|++.|+
T Consensus 52 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 113 (117)
T 2byg_A 52 GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT-SEVVYLKVGKP 113 (117)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 45689999999999999999 9999999999999999 899999999865 67888888774
No 355
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=2.3e-06 Score=73.74 Aligned_cols=56 Identities=11% Similarity=0.133 Sum_probs=51.7
Q ss_pred eEEEEEEeecccccc-ccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAG-YERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g-~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.++|..|.+++||+. +++++||+|++|||++|.+ ++++.++++. .++.+.|++.|+
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 102 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQ 102 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 468999999999999 9999999999999999999 6999999997 788899998885
No 356
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.17 E-value=3.7e-06 Score=71.49 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=51.4
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|.+|.+++||+.+| +++||+|++|||++|.+ +.++..+++.. ++.++|++.|+
T Consensus 30 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 91 (106)
T 4amh_A 30 GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKVAKP 91 (106)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEeC
Confidence 45689999999999999999 99999999999999954 78888888764 56899998884
No 357
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.17 E-value=9.1e-06 Score=85.58 Aligned_cols=71 Identities=17% Similarity=0.245 Sum_probs=55.8
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE---EEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK---EHEFS 415 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~---~~~~~ 415 (590)
..+++|..|.++|||+++ |++||+|++|||++|.+|..- ++..++. ...|+++.|+|.|+|+ ..+++
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~--------~~~~~l~-~~~g~~v~l~v~r~g~~~~~~~~~ 168 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLY--------DVSDLLQ-GEADSQVEVVLHAPGAPSNTRTLQ 168 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHC-BSTTCEEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHh-cCCCCEEEEEEEeCCCCcceEEEE
Confidence 368999999999999999 999999999999999997311 1224443 3578999999999987 55555
Q ss_pred EEEe
Q 007765 416 ITLR 419 (590)
Q Consensus 416 v~l~ 419 (590)
++..
T Consensus 169 l~r~ 172 (388)
T 1fc6_A 169 LTRQ 172 (388)
T ss_dssp EECB
T ss_pred EEEc
Confidence 5543
No 358
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.16 E-value=1e-06 Score=74.92 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=48.7
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHH--HHHHHHHhcCCCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLK--HLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~--~l~~~v~~~~~~~v~l~~~r 538 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.++. ++.++++ ..++.++|++.|
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r 83 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR-KSGNSVTLLVLD 83 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH-HTTTEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH-hCCCEEEEEEEE
Confidence 35678999999999999999999999999999999887 8899998 456667776655
No 359
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=98.16 E-value=0.0002 Score=66.33 Aligned_cols=164 Identities=12% Similarity=0.104 Sum_probs=104.9
Q ss_pred HHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEEE-E-ec
Q 007765 107 AAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVE-A-VG 184 (590)
Q Consensus 107 ~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~vv-~-~d 184 (590)
-....+++.++.|.+.. +.-||+-|.+...|-+.|.-.+ +. |.+ +|++++..-. . .|
T Consensus 10 f~~~l~~~N~~~vtt~~----------------g~ft~LgI~dr~~vvP~Ha~~~-~~--i~i--~g~~~~v~d~~~L~~ 68 (187)
T 3qzr_A 10 FALSLLRRNVRQVQTDQ----------------GHFTMLGVRDRLAVLPRHSQPG-KT--IWI--EHKLVNVLDAVELVD 68 (187)
T ss_dssp HHHHHHHHHEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEECCC
T ss_pred HHHHHHHcCeEEEEECC----------------CeEEEEEEeeeEEEEeCCCCCC-CE--EEE--CCEEEEeeeeEEEEC
Confidence 34556678889998732 3358999999999999999443 44 333 6677665221 1 12
Q ss_pred ---CCCCeEEEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccc
Q 007765 185 ---HECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAI 261 (590)
Q Consensus 185 ---~~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i 261 (590)
...||++++++..+-..++... +.+.......+..+-+........+..|.+...... ...+......+.++++.
T Consensus 69 ~~g~~~Elt~v~l~~~~kfRDIrkf-i~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pT 146 (187)
T 3qzr_A 69 EQGVNLALTLITLDTNEKFRDITKF-IPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-NLSGKPTHRTMMYNFPT 146 (187)
T ss_dssp TTCCCCSEEEEEECSSCCBCCCGGG-SCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCC
T ss_pred CCCCEEEEEEEEcCCCccccchHHh-CccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-eCCCCccccEEEECCCC
Confidence 2469999999976422333331 233322223455555444433345555766654322 23344445688999999
Q ss_pred cCCCCCceEEeCCEEEEEEeeecCCCCceeEEeeh
Q 007765 262 NPGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 262 ~~G~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
..|.-||+|+..|+++||+.++ ....||+.++
T Consensus 147 k~G~CGgvl~~~gkIiGIHvaG---nG~~G~~a~L 178 (187)
T 3qzr_A 147 KAGQCGGVVTSVGKIIGIHIGG---NGRQGFCAGL 178 (187)
T ss_dssp CTTCTTCEEEETTEEEEEEEEE---CSSCEEEEEC
T ss_pred CCCccCCeEEecCcEEEEEECC---CCCcEEEEEe
Confidence 9999999999999999999996 3456777765
No 360
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=2.2e-06 Score=72.15 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=48.5
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||++|.++.+. +++.. ..++.+.|++.|+
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~~~~v~l~v~R~ 92 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-EAVKALKGSKKLVLSVYSA 92 (101)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-HHHHHSSSSSSCCEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-HHHHhhcCCCeEEEEEEEC
Confidence 3578999999999999999999999999999999999984 45544 4456788888774
No 361
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.16 E-value=3.3e-06 Score=69.90 Aligned_cols=59 Identities=8% Similarity=0.170 Sum_probs=50.0
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.++ +++||+|++|||+++.+ +.++.++++... +.+.|++.|+
T Consensus 31 ~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 92 (94)
T 2fe5_A 31 GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLKVAKP 92 (94)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC-SEEEEEEECC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcC
Confidence 45689999999999999999 99999999999999988 578787787653 4788887664
No 362
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=2.1e-06 Score=74.49 Aligned_cols=58 Identities=10% Similarity=0.123 Sum_probs=51.6
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|. ++.++.++++...+ .++|++.|+
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~ 112 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG-TVTLMVLSS 112 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-SEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEeC
Confidence 4688999999999999998 9999999999999999 89999999987554 588888774
No 363
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.16 E-value=3.2e-06 Score=69.32 Aligned_cols=56 Identities=13% Similarity=0.161 Sum_probs=49.0
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|.+|.++++|+.+| ++.||+|++|||+++ .+++++.++++...+ .++|++.+
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~-~v~L~v~~ 79 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG-KLQLVVLR 79 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT-EEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEeC
Confidence 367899999999999998 999999999999999 899999999998654 66666654
No 364
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.16 E-value=1.5e-06 Score=75.32 Aligned_cols=60 Identities=18% Similarity=0.252 Sum_probs=47.4
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.+++||+ + |++||+|++|||+++.++.+.. +..++. ..++.+.|+|.|+++
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSF--------AVQQLR--KSGKIAAIVVKRPRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHH--------HHHHHH--HSCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHH--------HHHHHh--cCCCeEEEEEEECCc
Confidence 4689999999999997 7 9999999999999998875421 112332 268899999998654
No 365
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=2.2e-06 Score=72.53 Aligned_cols=58 Identities=10% Similarity=0.095 Sum_probs=51.1
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.++ +++||+|++|||++|.+ +.++.++++. .++.+.|++.|+
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 97 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRP 97 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 4567999999999999999 99999999999999988 6788888877 678899998875
No 366
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.15 E-value=1.9e-06 Score=73.34 Aligned_cols=59 Identities=24% Similarity=0.340 Sum_probs=49.9
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+ +++++||+|++|||+++.++.++..++.. .+++.+.+++.|+
T Consensus 37 ~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 37 GETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp CCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEEC
Confidence 45689999999999999 99999999999999999999888776654 3567788877663
No 367
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.15 E-value=8.1e-07 Score=78.43 Aligned_cols=58 Identities=17% Similarity=0.267 Sum_probs=51.2
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|+.|.++++|+.+| ++.||+|++|||++| .+++++.++++.. ++.+.|++.|+
T Consensus 64 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~ 124 (128)
T 1nf3_C 64 VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIAN-SRNLIITVRPA 124 (128)
T ss_dssp EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHT-TTSEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 3679999999999999999 899999999999999 8899999999865 45688888764
No 368
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.15 E-value=2.7e-06 Score=70.97 Aligned_cols=57 Identities=11% Similarity=0.231 Sum_probs=50.6
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+| +++||+|++|||+++.+ ++++.++++ ..++.+.|++.|+
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~ 89 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQ 89 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeC
Confidence 567999999999999999 99999999999999974 789999998 5778888888774
No 369
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.15 E-value=2.3e-06 Score=72.18 Aligned_cols=59 Identities=10% Similarity=0.129 Sum_probs=51.8
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.+ +.++..+++. .++.+.|.+.|+
T Consensus 32 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 93 (102)
T 2i1n_A 32 DDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRR 93 (102)
T ss_dssp TCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 45689999999999999999 99999999999999977 8888888877 578888888763
No 370
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.15 E-value=2.6e-06 Score=72.94 Aligned_cols=59 Identities=14% Similarity=0.208 Sum_probs=48.8
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHH--HHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKH--LCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~--l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+++++||+|++|||++|.++.+ ....++. +++.+.|++.|+
T Consensus 44 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 104 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRE 104 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEEC
Confidence 4567899999999999999999999999999999999544 4444444 678888888774
No 371
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=8.4e-07 Score=74.09 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=46.4
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..+++|..|.++|||+ + |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|++
T Consensus 30 ~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWER--------AVDILR--EAEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHH--------HHHHHH--HCSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECC
Confidence 3688999999999996 8 9999999999999998764321 112232 26899999999976
No 372
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.14 E-value=1.4e-06 Score=76.71 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=57.7
Q ss_pred ceEEEEEEeeccccccccc-cCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC-eEEEEEec
Q 007765 482 QLVILSQVLMDDINAGYER-FADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~-~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
.+++|..|.++++|+.+|+ +.||+|++|||+++.+ ++++.++++..+++.+.|++.|+ ....+..+
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~~ 102 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGFTTHLE 102 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCSEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCceEEEEEE
Confidence 5688999999999999998 9999999999999999 99999999998889999999884 44444444
No 373
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.14 E-value=1.9e-06 Score=72.89 Aligned_cols=58 Identities=10% Similarity=0.155 Sum_probs=50.2
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||+++.++ .++..+++.. ++.+.|++.|+
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 87 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRA 87 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 3568899999999999999999999999999999987 6777777765 77889998874
No 374
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.14 E-value=2.2e-06 Score=81.19 Aligned_cols=57 Identities=19% Similarity=0.339 Sum_probs=48.2
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+ |.++ ..++. .|+.+.|+|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~----------~~~l~---~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEV----------INLIR---TEKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHH----------HHHHT---SSSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHc---CCCeEEEEEEECCc
Confidence 58999999999999999 99999999999999998 4332 23332 28999999999987
No 375
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.14 E-value=2.4e-06 Score=70.78 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=46.3
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHH--HHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHL--CQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l--~~~v~~~~~~~v~l~~~r~ 539 (590)
++++|..|.+++||+.+++++||+|++|||+++.++.++ .+.++ +++.++|++.|+
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~g~~v~l~v~R~ 86 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK--SGAYVALTLLGS 86 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT--SSSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc--CCCEEEEEEEEC
Confidence 457899999999999999999999999999999997554 33333 577888888774
No 376
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.14 E-value=1.8e-06 Score=75.98 Aligned_cols=59 Identities=17% Similarity=0.131 Sum_probs=53.3
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.++++|+.+|+++||+|++|||+++.+ +.++.++++..+++.+.+.+.|+
T Consensus 32 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (128)
T ss_dssp SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeC
Confidence 347899999999999999999999999999999999 99999999998777777887764
No 377
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.14 E-value=2.1e-06 Score=71.29 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=49.4
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||+++.++ .++..+++. .++.+.|++.|+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSG 90 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 3467899999999999999999999999999999985 677777776 677888888774
No 378
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.14 E-value=2.1e-06 Score=75.73 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=53.9
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.+ ++++.++++. .++.+.|.+.|+
T Consensus 44 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 105 (129)
T 2dmz_A 44 EASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVRR 105 (129)
T ss_dssp CCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 34689999999999999999 99999999999999999 9999999998 888898888763
No 379
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.14 E-value=2.8e-06 Score=69.34 Aligned_cols=57 Identities=23% Similarity=0.293 Sum_probs=44.0
Q ss_pred CceEEEEeCCCChhhh-c-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
.|++|..|.++|||++ + |++||+|++|||+++.++... ++..++. ..++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHK--------EAVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHH--------HHHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEE
Confidence 5789999999999999 7 999999999999999876432 1223332 357788888754
No 380
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=2.6e-06 Score=70.27 Aligned_cols=53 Identities=9% Similarity=0.202 Sum_probs=46.8
Q ss_pred EEEEEeeccccccccccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCC
Q 007765 485 ILSQVLMDDINAGYERFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 485 vl~~V~~~s~a~g~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
+|++|.++++|+.+|+++||+|++|||++| .++.++.+++++. ++.+.|++.+
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p 88 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMP 88 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEEC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 788999999999999999999999999999 5899999999864 6777776643
No 381
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=3e-06 Score=73.42 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=51.7
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|+.|.++++|+.++ +++||+|++|||+++.+ +.++.++++. .++.+.|++.|+
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 108 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLD 108 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESS
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEEC
Confidence 4578999999999999999 99999999999999976 7889999987 677888888875
No 382
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.4e-06 Score=70.46 Aligned_cols=56 Identities=13% Similarity=0.009 Sum_probs=48.1
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+++|..|.+++||+.+|+++||+|++|||+++.+ +.++.++++.. ++.+.+++.|+
T Consensus 25 ~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 82 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRM 82 (91)
T ss_dssp SCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEEC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 4689999999999999999999999999999995 68889888864 45678877764
No 383
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.13 E-value=2.1e-06 Score=74.24 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=48.6
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++... ++..++. ..++.+.|+|.|+++..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHE--------EAITALR--QTPQKVRLVVYRDEAHY 106 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHH--------HHHHHHH--TCCSEEEEEEECCSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEEeCCccc
Confidence 58999999999999987 999999999999999986421 1223332 24588999999987643
No 384
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.9e-06 Score=73.53 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=51.9
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.++ +++||+|++|||++| .+++++.+++++ .++.++|++.|+
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILPV 101 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECCB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEEC
Confidence 458999999999999999 999999999999999 779999999994 788899988875
No 385
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.13 E-value=3.5e-06 Score=71.47 Aligned_cols=59 Identities=12% Similarity=0.181 Sum_probs=51.1
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.+| +++||+|++|||+++.+ +.++...++.. ++.+.|.+.|+
T Consensus 31 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~ 92 (105)
T 2awx_A 31 GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT-SDFVYLKVAKP 92 (105)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-CSEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcC
Confidence 45689999999999999999 99999999999999966 77777778765 67888988874
No 386
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.12 E-value=2.5e-06 Score=72.95 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=49.2
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.++++|+.+|+++||+|++|||++|.+| .++.++++.. ++.+.|++.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~ 102 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVM 102 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEE
Confidence 478999999999999999999999999999999999 9999999875 6667776543
No 387
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.12 E-value=2.4e-06 Score=70.66 Aligned_cols=60 Identities=17% Similarity=0.240 Sum_probs=46.6
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..|++|..|.++|||+++ |++||+|++|||+++.++... ++..++.. .++.+.|+|.|++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHE--------KAVELLKA--AQGSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHH--------HHHHHHHH--CCSEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCcEEEEEEeCC
Confidence 368999999999999987 999999999999999976321 12233322 4568999998865
No 388
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1.7e-06 Score=74.66 Aligned_cols=70 Identities=20% Similarity=0.219 Sum_probs=51.0
Q ss_pred cccceeeeccHhhhhhcCCCCCcCceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccC
Q 007765 318 LGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKK 396 (590)
Q Consensus 318 lGi~~~~~~~~~~~~~lgl~~~~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~ 396 (590)
+||.++.+. +. + ..|++|..|.++|||+++ |++||+|++|||++|.++.. . ++..++.
T Consensus 31 ~G~~v~~~~-~~-----~----~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~-~-------~~~~~l~--- 89 (114)
T 2d8i_A 31 YGFSLSSVE-ED-----G----IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNS-S-------MLKDFLS--- 89 (114)
T ss_dssp CCCEEEEEE-ET-----T----EEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCH-H-------HHHHHHT---
T ss_pred cCEEEEecC-cC-----C----cCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCH-H-------HHHHHHh---
Confidence 677776652 11 1 258999999999999999 99999999999999998631 0 1223332
Q ss_pred CCCEEEEEEEeCC
Q 007765 397 PNEKSLVRVLRDG 409 (590)
Q Consensus 397 ~g~~v~l~V~R~g 409 (590)
+..+.|+|.|..
T Consensus 90 -~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 -QPSLGLLVRTYP 101 (114)
T ss_dssp -SSEEEEEEEECC
T ss_pred -CCcEEEEEEECC
Confidence 348888888754
No 389
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.12 E-value=6.8e-06 Score=84.37 Aligned_cols=67 Identities=13% Similarity=0.127 Sum_probs=57.7
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCC-C-eEEEEEec
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDD-D-RVVVLNYD 547 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r-~-~~i~l~~~ 547 (590)
.++++|..|.+++||+.+|+++||+|++|||++|.+|.+|.+++.. .+++.++|++.| + +.+.+...
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~~v~ 310 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVT 310 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCEEEEEEE
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCEEEEEEE
Confidence 4678999999999999999999999999999999999999999987 468889999987 4 54444443
No 390
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.12 E-value=1.7e-06 Score=74.01 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=48.6
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccC--CCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKK--PNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~--~g~~v~l~V~R~g~ 410 (590)
.+++|..|.+++||+++ |++||+|++|||+++.++..- ++..++.... .+..++|+|.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~--------~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFE--------EAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHH--------HHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHccccCCCceEEEEEEeCCC
Confidence 47999999999999987 999999999999999874311 2235554433 47889999999764
No 391
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.11 E-value=1.8e-06 Score=76.08 Aligned_cols=62 Identities=15% Similarity=0.184 Sum_probs=48.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhcc-----CCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMK-----KPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~-----~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.+++||+++ |++||+|++|||+++.+...- ++..++... ..++.+.|+|.|++.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNH--------EAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHH--------HHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 58999999999999987 999999999999999886421 122444332 247899999999765
No 392
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.11 E-value=2.8e-06 Score=75.35 Aligned_cols=60 Identities=12% Similarity=0.222 Sum_probs=47.9
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++... ++..++. ..|+.+.|+|.|.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR--------QVVNMIR--QGGNTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHH--------HHHHHHH--HTTTEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCEEEEEEEECCC
Confidence 58999999999999999 999999999999999976432 1223333 268899999988654
No 393
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.11 E-value=4.3e-06 Score=72.60 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=46.4
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++..++. ..++++.|+|.|.
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~--------~~~~~l~--~~~~~v~L~v~R~ 112 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRS--------EAVALLK--RTSSSIVLKALEV 112 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHH--------HHHHHHH--SCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEEC
Confidence 468999999999999987 999999999999999944321 1223443 3578899999984
No 394
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.10 E-value=3e-06 Score=73.63 Aligned_cols=58 Identities=12% Similarity=0.076 Sum_probs=51.5
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
...+++|..|.++++|+.+| +++||+|++|||+++. ++.++.++++.. ++.++|++.|
T Consensus 51 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~v~R 111 (118)
T 3b76_A 51 WDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SSSIVLKALE 111 (118)
T ss_dssp CCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CSEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 45678999999999999999 9999999999999999 999999999975 5668887765
No 395
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.10 E-value=1e-06 Score=77.56 Aligned_cols=58 Identities=16% Similarity=0.175 Sum_probs=52.6
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||++|. +++++.++++.. ++.+.|++.|+
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~ 119 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPK 119 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEEC
Confidence 45688999999999999999999999999999998 999999999975 88889988774
No 396
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.10 E-value=1.8e-06 Score=71.71 Aligned_cols=49 Identities=14% Similarity=0.149 Sum_probs=44.6
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSE 530 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~ 530 (590)
.+++|..|.+++||+.+|+++||+|++|||+++.++ +++.++++...++
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 79 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 478999999999999999999999999999999999 9999999985443
No 397
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.10 E-value=2.9e-06 Score=71.82 Aligned_cols=56 Identities=18% Similarity=0.259 Sum_probs=49.6
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEe
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~ 536 (590)
...+++|..|.+++||+.+|+++||+|++|||++|. +++++.++++...+ .++|++
T Consensus 46 ~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 46 SEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp CSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEE
Confidence 346789999999999999999999999999999999 99999999998754 666654
No 398
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.09 E-value=5.5e-06 Score=70.30 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=51.5
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.++ +++||+|++|||+++. ++.++..+++. .++.+.|++.|+
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 97 (106)
T 3axa_A 36 DKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQ 97 (106)
T ss_dssp SSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 45689999999999999999 9999999999999998 58888888876 677888888774
No 399
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=2.3e-06 Score=74.10 Aligned_cols=58 Identities=10% Similarity=0.029 Sum_probs=50.7
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+++||+|++|||++|.++.++...+.. ..++.+.|++.|+
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~ 100 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYN 100 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 578999999999999999999999999999999999888777643 5677888888874
No 400
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.08 E-value=2.7e-06 Score=75.00 Aligned_cols=58 Identities=10% Similarity=0.179 Sum_probs=52.2
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC---CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE---NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~---~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|. ++.++.++++. .++.+.|++.|+
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~ 114 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVARE 114 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcC
Confidence 4689999999999999999 9999999999999999 99999999987 667788887765
No 401
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.08 E-value=4.4e-06 Score=68.76 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=47.1
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHH--HHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLK--HLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~--~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.++. +...+++. .++.+.|.+.|+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE-SGNKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-STTEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 36789999999999999999999999999999999975 44455554 467777777653
No 402
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.08 E-value=2.6e-06 Score=71.69 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=49.8
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.+| +++||+|++|||+++.++ .++.++++.. ++.+.|++.|+
T Consensus 35 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 96 (101)
T 2jik_A 35 NDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHR 96 (101)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC-CSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 35688999999999999999 999999999999999885 7777888764 66788877653
No 403
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.08 E-value=1.4e-06 Score=75.67 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=48.7
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
..|++|..|.+++||+++ |++||+|++|||++|.++... ++..++ ....+..+.+++.|+++..+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l-~~~~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHH--------DALAIL-RQAREPRQAVIVTRKLTPEA 107 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHH--------HHHHHH-HHTTSSSEEEEEEECCCSSS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHH-HhCCCCeEEEEEEcCCCccc
Confidence 368999999999999987 999999999999999864321 112333 22345667788999886543
No 404
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.08 E-value=2.2e-06 Score=74.21 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=47.4
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+..... +..++. ..++.+.|+|.|.+.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE--------AVEAIK--NAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--TSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 369999999999999987 9999999999999998765321 112332 358899999988543
No 405
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.08 E-value=4.3e-06 Score=70.58 Aligned_cols=58 Identities=9% Similarity=0.101 Sum_probs=50.1
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||++ ++++||+|++|||+++.+ +.++...++ ..++.++|++.|+
T Consensus 41 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 100 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK-TFQNTVELIIVRE 100 (103)
T ss_dssp SCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHH-HCCSEEEEEEECC
T ss_pred CCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhh-cCCCeEEEEEEec
Confidence 456889999999999999 999999999999999987 677777777 4577888888775
No 406
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.08 E-value=1.9e-06 Score=73.87 Aligned_cols=59 Identities=15% Similarity=0.125 Sum_probs=52.9
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.++ +++||+|++|||++|. ++.++.++++. .++.+.|++.|+
T Consensus 42 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 103 (111)
T 1uju_A 42 TDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VGDTLTVLVCDG 103 (111)
T ss_dssp TCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CSSEEEECCCCC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 45688999999999999999 9999999999999999 79999999887 577888888875
No 407
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.08 E-value=3.9e-06 Score=72.40 Aligned_cols=56 Identities=14% Similarity=0.191 Sum_probs=48.8
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.+| +++||+|++|||+++ .+++++.++++...+ .++|++.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG-EVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-EEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEe
Confidence 468999999999999999 999999999999999 999999999987654 46666543
No 408
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.07 E-value=2.7e-06 Score=75.21 Aligned_cols=59 Identities=2% Similarity=0.107 Sum_probs=52.6
Q ss_pred cceEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.++++|+.+ +++.||+|++|||+++.+ +++++++++..+++.+.|.+.|+
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~ 117 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRK 117 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeC
Confidence 456899999999999999 999999999999999987 79999999998888788887664
No 409
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.07 E-value=4.6e-06 Score=70.89 Aligned_cols=56 Identities=21% Similarity=0.225 Sum_probs=49.9
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+++|..|.+++||+.+|++.||+|++|||+++. ++.++.++++. .++.+.|++.|.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSV 101 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcC
Confidence 456999999999999999999999999999999 88999999985 577888887763
No 410
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.07 E-value=6.2e-06 Score=70.09 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=45.7
Q ss_pred CceEEEEeCCCChhhhc---cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCC--CCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI---LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKP--NEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a---L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~--g~~v~l~V~R~ 408 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++.+.. +..++..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~--------~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH--------HHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCcEEEEEEEcC
Confidence 57899999999999987 9999999999999999886421 2233333221 34899999874
No 411
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.07 E-value=4.1e-06 Score=69.86 Aligned_cols=57 Identities=9% Similarity=0.085 Sum_probs=45.7
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+| +++||+|++|||++|.+ ..+...+++ ..++.+.|++.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK-GANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH-TCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCcEEEEEEeC
Confidence 468999999999999999 99999999999999986 334344444 4556788887774
No 412
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.06 E-value=2.7e-06 Score=71.90 Aligned_cols=60 Identities=18% Similarity=0.272 Sum_probs=47.6
Q ss_pred cCceEEEEeCCCChhhhccCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCC
Q 007765 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDG 409 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~aL~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g 409 (590)
..|++|..|.++|||++.|++||+|++|||+++.+..... +...+. ..++.+.|+|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHH--------HHHHHH--HCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--cCCCeEEEEEEecC
Confidence 4789999999999998889999999999999998865321 112222 46889999999863
No 413
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.06 E-value=2e-06 Score=72.89 Aligned_cols=54 Identities=22% Similarity=0.229 Sum_probs=42.7
Q ss_pred cCceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRV 405 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V 405 (590)
..|++|..|.++|||+++ |++||+|++|||++|. ++.++ ..++... ++++.|+|
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~----------~~~l~~~--~~~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQV----------VDLIRSS--GNLLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHH----------HHHHHHT--TTEEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHH----------HHHHHhC--CCcEEEEE
Confidence 368999999999999999 9999999999999999 44443 3555443 34777765
No 414
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.06 E-value=3.3e-06 Score=79.67 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=50.3
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
..|++|..|.++|||+++ |++||+|++|||++|.+ |.++ ..++. ..++.+.|+|.|++....
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~--~~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDA----------VAALK--NTYDVVYLKVAKPSNAET 194 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHH----------HHHHH--SCCEEEEEEEEEESCCCE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHH----------HHHHH--cCCCeEEEEEeCCCCccc
Confidence 368999999999999987 99999999999999998 4432 24443 357899999999876543
No 415
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.06 E-value=3.3e-06 Score=88.85 Aligned_cols=62 Identities=18% Similarity=0.116 Sum_probs=50.4
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.+...- ++..++.....|+.+.|+|.|+|+
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~--------e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIRE--------EAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHH--------HHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhhcCCCeEEEEEeeCCc
Confidence 79999999999999999 999999999999999874211 122455444689999999999763
No 416
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.06 E-value=1.1e-05 Score=69.06 Aligned_cols=63 Identities=21% Similarity=0.153 Sum_probs=47.7
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEHE 413 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~~ 413 (590)
.|.+|..|.+ +++.+ |++||+|++|||++|.+..+- ++..++.....|+.+.|+|.|+|....
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~--------evv~~lk~~~~G~~v~L~V~R~g~~~p 97 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHL--------QVVEVLKQFPVGADVPLLILRGGPPSP 97 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHH--------HHHHHHHHSCTTCEEEEEEEESSCC--
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHcCCCCCEEEEEEEECCccCc
Confidence 4667888877 57778 999999999999999976531 233566655679999999999886543
No 417
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.05 E-value=1.4e-06 Score=73.31 Aligned_cols=57 Identities=14% Similarity=0.019 Sum_probs=48.3
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+++++||+|++|||++|. ++.++.++++...+ .+.|++.|+
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~ 94 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPS-EIILLVWRV 94 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSS-EEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEEC
Confidence 3467888999999999999999999999999999 46999999987644 477777664
No 418
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.05 E-value=4.4e-06 Score=77.07 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=55.4
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHH-HH-HHHHhcCCCceEEEeCCC-eEEEEEec
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKH-LC-QLVENCSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~-l~-~~v~~~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
.+++|..|.+++||+.+|++.||+|++|||+++.+|.+ +. ++++...++.+.+++.|+ +...+...
T Consensus 27 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~ 95 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMH 95 (166)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEe
Confidence 56899999999999999999999999999999999998 55 556666777999999776 65555554
No 419
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.05 E-value=3.3e-06 Score=74.36 Aligned_cols=59 Identities=7% Similarity=0.016 Sum_probs=52.3
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhc------CCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENC------SSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~------~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| ++.||+|++|||+++.+ +.+++++|+.. +++.|+|++.|+
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~ 121 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRR 121 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeC
Confidence 3578999999999999999 99999999999999988 77999999975 578888888764
No 420
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.05 E-value=4.6e-06 Score=71.81 Aligned_cols=57 Identities=21% Similarity=0.328 Sum_probs=49.9
Q ss_pred ceEEEEEEeeccccccccc-cCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYER-FADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~-~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+|+ ++||+|++|||++|. +++++.++++... +.+.|++.|+
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 107 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPS 107 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 5679999999999999999 999999999999999 7889999998765 4677777663
No 421
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.05 E-value=4.6e-06 Score=71.66 Aligned_cols=59 Identities=10% Similarity=0.124 Sum_probs=51.6
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| +++||+|++|||+++.+ +.++..+++.. ++.+.|.+.|+
T Consensus 33 ~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 94 (113)
T 2g5m_B 33 EKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGRE 94 (113)
T ss_dssp CCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeC
Confidence 45789999999999999999 99999999999999985 77778888875 78888888764
No 422
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.05 E-value=1e-06 Score=94.50 Aligned_cols=68 Identities=24% Similarity=0.212 Sum_probs=58.5
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC-eEEEEEec
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD-RVVVLNYD 547 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~-~~i~l~~~ 547 (590)
..++++|.+|.+++||+.+|+++||+|++|||++|.+|.+|..++.. .+++.+++++.|+ +.+.+.+.
T Consensus 284 ~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 353 (448)
T 1ky9_A 284 AQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE 353 (448)
T ss_dssp TCCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC
T ss_pred CCCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 34788999999999999999999999999999999999999999987 4688999999874 55555444
No 423
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.05 E-value=1.4e-06 Score=74.66 Aligned_cols=61 Identities=15% Similarity=0.119 Sum_probs=47.3
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..|++|..|.++|||+++ |++||+|++|||+++.+.... ++..++. ..++.+.|+|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHG--------EAVQLLR--SVGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHH--------HHHHHHS--SCSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEECCC
Confidence 468999999999999987 999999999999999954321 1123332 368899999988653
No 424
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=98.05 E-value=0.00034 Score=64.67 Aligned_cols=163 Identities=13% Similarity=0.104 Sum_probs=102.8
Q ss_pred HHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEE--EEecC
Q 007765 108 AIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQV--EAVGH 185 (590)
Q Consensus 108 ~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~v--v~~d~ 185 (590)
....+++.++.|.+.. +.-||.-|-+...|-+.|.-.+ +. |.+ +|++++..- .-.|.
T Consensus 9 ~~sl~k~N~~~vtT~~----------------G~ft~LgI~dr~~vvPtHa~~~-~~--i~i--~G~~~~v~d~~~L~~~ 67 (191)
T 3q3y_A 9 AVAMMKRNASTVKTEY----------------GEFTMLGIYDRWAVLPRHAKPG-PT--ILM--NDQEVGVLDAKELVDK 67 (191)
T ss_dssp HHHHHHHHEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEEEECT
T ss_pred HHHHHHcCeEEEEECC----------------CcEEEEEEeceEEEEECCCCCC-CE--EEE--CCEEEEeeeEEEEEcC
Confidence 3455667888888722 3358888989999999999443 44 333 677776521 11232
Q ss_pred ---CCCeEEEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEccccc
Q 007765 186 ---ECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAIN 262 (590)
Q Consensus 186 ---~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~ 262 (590)
..||++|+++..+-+.++.. -+.+..........+-.........+..|.+...... ...+......+.++++..
T Consensus 68 ~g~~lElt~v~l~~~~kFRDIrk-fi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk 145 (191)
T 3q3y_A 68 DGTNLELTLLKLNRNEKFRDIRG-FLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-NLGGTPTKRMLVYNFPTR 145 (191)
T ss_dssp TCCEEEEEEEEEECSSCBCCCGG-GBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EETTEEEEEEEEEESCCC
T ss_pred CCCEEEEEEEECCCCccccchHH-hcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-eCCCCcccCEEEecCCCC
Confidence 35999999998642233433 2333333333344444443433334555766654322 223344456889999999
Q ss_pred CCCCCceEEeCCEEEEEEeeecCCCCceeEEeeh
Q 007765 263 PGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 263 ~G~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
.|.-||+|+..|+++||.+++ ....||+.++
T Consensus 146 ~G~CGgvL~~~gkIiGIHvgG---nG~~Gfaa~L 176 (191)
T 3q3y_A 146 AGQCGGVLMSTGKVLGIHVGG---NGHQGFSAAL 176 (191)
T ss_dssp TTCTTCEEEETTEEEEEEEEE---ETTEEEEEEC
T ss_pred CCccCCEEEeCCCEEEEEECC---CCcceEEeeh
Confidence 999999999999999999986 3456777654
No 425
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=6.8e-06 Score=67.87 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=49.4
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.++ +++||+|++|||+++. ++.++.++++... +.+.|++.|+
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~ 89 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSG 89 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeC
Confidence 3568999999999999995 9999999999999999 4788888888754 5788888764
No 426
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.04 E-value=3.1e-06 Score=73.53 Aligned_cols=59 Identities=7% Similarity=0.137 Sum_probs=51.6
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|. ++.++.++++..+++.+.+.+.|+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 102 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK 102 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 3578999999999999999 9999999999999998 699999999988877766666553
No 427
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=98.04 E-value=0.00018 Score=66.63 Aligned_cols=145 Identities=17% Similarity=0.160 Sum_probs=90.0
Q ss_pred eEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEE---E-EEEEec-CCCCeEEEEecCCcccCcceeEEcCCCCCCC
Q 007765 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYR---A-QVEAVG-HECDLAILIVESDEFWEGMHFLELGDIPFLQ 215 (590)
Q Consensus 141 ~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~---a-~vv~~d-~~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G 215 (590)
.-||.-|.+.+.|...|...+. . +.+ +++.+. + .++..+ -..||++++++..+-.+++.. -+.+.....
T Consensus 24 ~~t~LgI~d~~~vvP~Ha~~~~-~--i~i--~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrk-fi~~~~~~~ 97 (182)
T 2b0f_A 24 EFTGLGIHDRVCVIPTHAQPGD-D--VLV--NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRG-FISEDLEGV 97 (182)
T ss_dssp EEEEEEEEBTEEEEESTTCCCS-E--EEE--TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGG-TBCSSCCCS
T ss_pred cEEEEEEeeeEEEEecCCCCcc-E--EEE--CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHH-hcCCCCCCC
Confidence 3488999999999999997763 3 343 454432 2 222212 267999999987643334443 122322112
Q ss_pred CeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCCCCCceEEeCCEEEEEEeeecCCCCceeEEee
Q 007765 216 QAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIP 295 (590)
Q Consensus 216 ~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip 295 (590)
+.+.++ +-.......+..|.+....... ..+.....++.++++...|.-||||+.+|+++||++++ ....||+.+
T Consensus 98 ~~~lv~-n~~~~p~~~~~vg~~~~~g~i~-l~G~~t~~~~~Y~~pTk~G~CGgvl~~~gkIlGIHvaG---~G~~Gfaa~ 172 (182)
T 2b0f_A 98 DATLVV-HSNNFTNTILEVGPVTMAGLIN-LSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIHVGG---NGRQGFSAQ 172 (182)
T ss_dssp EEEEEE-ESSSCEEEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTCTTCEEEETTEEEEEEEEE---ETTEEEEEE
T ss_pred ceEEEE-EcCCCceEEEEecceEEeceEc-CCCcEecceEEeccCCCCcccCCeEEeCCCEEEEEeCC---CCCceEehh
Confidence 334444 3223222234566665433322 33444556788999999999999999999999999996 356788876
Q ss_pred h
Q 007765 296 V 296 (590)
Q Consensus 296 ~ 296 (590)
+
T Consensus 173 l 173 (182)
T 2b0f_A 173 L 173 (182)
T ss_dssp C
T ss_pred h
Confidence 4
No 428
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=3.3e-06 Score=71.97 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=52.1
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| ++.||+|++|||+++. ++.++..+++.. ++.+.|.+.|+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 101 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT-GQVVHLLLEKG 101 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT-TSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 4678999999999999999 9999999999999999 888999999874 78888888775
No 429
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.03 E-value=5e-06 Score=69.03 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=48.8
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||+++.+ +.+....++. .++.+.|.+.|+
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 88 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIARP 88 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcC
Confidence 3578999999999999999 99999999999999976 5666777764 477888887763
No 430
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.03 E-value=1.1e-05 Score=69.74 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=51.0
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.+| +++||+|++|||+++.+ +.++..+++. .++.+.|++.|.
T Consensus 48 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~ 109 (117)
T 2ehr_A 48 ELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSL 109 (117)
T ss_dssp CCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCB
T ss_pred CcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 34689999999999999999 99999999999999976 7788888876 577888888763
No 431
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.03 E-value=6.8e-06 Score=70.57 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=50.5
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCCe
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDDR 540 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~~ 540 (590)
..+++|..|.++++|+.+| +++||+|++|||++|.+ +.++.++++. .++.+.|++.|+.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKRGE 109 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 3578999999999999999 99999999999999976 5777777776 5778888887753
No 432
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.03 E-value=1.2e-06 Score=76.23 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=46.2
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccC--CCCEEEEEEEeC
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKK--PNEKSLVRVLRD 408 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~--~g~~v~l~V~R~ 408 (590)
..++|..|.++|||+++ |++||+|++|||+++.++..- ++..++.... .|+.++|+|.|.
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLA--------EAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHH--------HHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHHhhhcCCCeEEEEEEeC
Confidence 34889999999999987 999999999999999986421 1223443321 388999999984
No 433
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.02 E-value=3.1e-06 Score=87.82 Aligned_cols=66 Identities=11% Similarity=0.152 Sum_probs=57.0
Q ss_pred cceEEEEEEeeccccccccccC-----------CceEEeeCCeecCCHHHHHHHHHhc-CCCceEEEeCCC-eEEEEEe
Q 007765 481 EQLVILSQVLMDDINAGYERFA-----------DLQVKKVNGVEIENLKHLCQLVENC-SSENLRFDLDDD-RVVVLNY 546 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~-----------gd~I~~VNG~~v~~~~~l~~~v~~~-~~~~v~l~~~r~-~~i~l~~ 546 (590)
.++++|.+|.+++||+.+|+++ ||+|++|||++|.+|++|.+++... +++.++|++.|+ +.+.+.+
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v 328 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISV 328 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEE
Confidence 3789999999999999999999 9999999999999999999999764 588999999884 4444333
No 434
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.02 E-value=5.9e-06 Score=68.34 Aligned_cols=59 Identities=12% Similarity=0.273 Sum_probs=45.0
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEe--cCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v--~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
..+++|..|.++|||+++ |++||+|++|||+++ .++.++ ..++.. .++.+.|+|.|..+
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEI----------IQILAQ--SQGAITFKIIPGSK 89 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHH----------HHHHHH--CCEEEEEEEECC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh--CCCeEEEEEEeCCC
Confidence 368999999999999987 999999999999999 444433 244433 34588999987544
No 435
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.02 E-value=6.3e-06 Score=71.78 Aligned_cols=58 Identities=10% Similarity=0.169 Sum_probs=49.9
Q ss_pred cceEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+ ++++||+|++|||+++.+ +.+...+++... +.++|++.|+
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 112 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS-GSIEMQVVAG 112 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC-SEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 457899999999999988 999999999999999987 688888888764 4588888774
No 436
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.01 E-value=7.4e-06 Score=69.59 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=49.3
Q ss_pred ceEEEEEEeecccccccc--ccCCceEEeeCCeecCCH--HHHHHHHHhcCC---CceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE--RFADLQVKKVNGVEIENL--KHLCQLVENCSS---ENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~--~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~---~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.+| ++.||+|++|||++|.++ .++..+++...+ +.+.|++.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 568999999999999999 999999999999999855 677888887653 5788877663
No 437
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.01 E-value=8.5e-06 Score=67.93 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=47.8
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcC-CCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
+++|..|.+. ++.+++++||+|++|||++|.+ ++++.++|+.++ ++.+.|++.|+
T Consensus 33 Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 90 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 90 (96)
T ss_dssp EEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECC
T ss_pred CEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 6788999883 5778999999999999999986 599999999985 88899988875
No 438
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.01 E-value=6.2e-06 Score=71.59 Aligned_cols=58 Identities=17% Similarity=0.139 Sum_probs=50.8
Q ss_pred ceEEEEEEeeccccccc--cccCCceEEeeCCeecCC--HHHHHHHHHhcCC---CceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGY--ERFADLQVKKVNGVEIEN--LKHLCQLVENCSS---ENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~--~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~---~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+ ++++||+|++|||++|.+ +.++.++++...+ +.+.|++.|+
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 105 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 105 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcc
Confidence 47899999999999999 999999999999999976 6888888888764 5788888776
No 439
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.01 E-value=7.2e-06 Score=67.58 Aligned_cols=59 Identities=17% Similarity=0.233 Sum_probs=49.4
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCCe
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDDR 540 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~~ 540 (590)
..+++|..|.+++||+.+| +++||+|++|||+++.+ +.++..+++. .++.+.|++.|..
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGRIS 89 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEccc
Confidence 3578999999999999999 99999999999999976 4677777765 4667888887753
No 440
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.01 E-value=9.5e-06 Score=69.95 Aligned_cols=55 Identities=13% Similarity=0.118 Sum_probs=43.0
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEe--cCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v--~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
.+++|..|.++|||+++ |++||+|++|||+++ .++.++. .++.. .++.+.|+|.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVA----------KMIQE--VKGEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--CCSEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEe
Confidence 57999999999999987 999999999999999 6665432 44432 34568888865
No 441
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.00 E-value=6.9e-06 Score=67.43 Aligned_cols=57 Identities=11% Similarity=0.208 Sum_probs=47.6
Q ss_pred cceEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 481 EQLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
..+++|..|.+++||+.+ ++++||+|++|||+++.+ +.++..+++.. ++.++|++.|
T Consensus 29 ~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 88 (90)
T 1qav_A 29 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKY 88 (90)
T ss_dssp TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE
Confidence 357899999999999998 999999999999999985 67777778764 5667777654
No 442
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.00 E-value=6.3e-06 Score=72.26 Aligned_cols=56 Identities=16% Similarity=0.207 Sum_probs=48.9
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.+| +++||+|++|||+++. ++.++.++++...++ +++++.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~-v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE-VTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE-EEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe-EEEEEEE
Confidence 567999999999999999 9999999999999998 799999999986554 6666644
No 443
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.00 E-value=5.7e-06 Score=70.00 Aligned_cols=56 Identities=7% Similarity=0.138 Sum_probs=50.0
Q ss_pred EEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhc----CCCceEEEeCCC
Q 007765 484 VILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENC----SSENLRFDLDDD 539 (590)
Q Consensus 484 vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~----~~~~v~l~~~r~ 539 (590)
++|..|.+++||+.++ +++||+|++|||+++.+ |++++++|+++ .++.++|.+.|.
T Consensus 34 ~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 34 PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEF 96 (103)
T ss_dssp CEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCC
T ss_pred EEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEc
Confidence 4899999999999999 99999999999999966 99999999987 677788887763
No 444
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.00 E-value=7.9e-07 Score=91.73 Aligned_cols=66 Identities=8% Similarity=0.085 Sum_probs=0.0
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHhcCCCceEEEeCCC-eEEEEEech
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVENCSSENLRFDLDDD-RVVVLNYDV 548 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~~~~~~v~l~~~r~-~~i~l~~~~ 548 (590)
..+++|..|.+++||+.+|+++||+|++|||++|.++.+|.++++. ++.++|++.|+ +.+.++..+
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R~g~~~~~~v~p 319 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR--ESTLNMVVRRGNEDIMITVIP 319 (332)
T ss_dssp ---------------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEECCEEEEEEEEE
Confidence 4678899999999999999999999999999999999999999986 77899998884 444444443
No 445
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.00 E-value=3.3e-06 Score=72.47 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=47.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||+++.++.... +..++. ..++.+.|+|.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ--------AAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--SCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCcEEEEEEECcc
Confidence 68899999999999987 9999999999999999885321 112332 468899999998754
No 446
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.00 E-value=8.7e-06 Score=72.14 Aligned_cols=56 Identities=13% Similarity=0.088 Sum_probs=49.5
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.++++|+.+|++.||+|++|||++|. ++.+++++++. .++.+.|++.+
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~ 122 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVM 122 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEE
Confidence 4789999999999999999999999999999998 58888999987 66778777755
No 447
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.99 E-value=8e-06 Score=68.99 Aligned_cols=60 Identities=22% Similarity=0.253 Sum_probs=45.6
Q ss_pred CceEEEEeCCCChhhh-c-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||++ + |++||+|++|||+++.+.... ++..++. ..++++.|+|.|...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~--------~~~~~l~--~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHK--------EAVTILS--QQRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHH--------HHHHHHH--HCCSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCcEEEEEEecCC
Confidence 4889999999999999 6 999999999999999875321 1223332 345689999988654
No 448
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=7.5e-06 Score=69.99 Aligned_cols=59 Identities=15% Similarity=0.193 Sum_probs=50.4
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.++ +++||+|++|||+++. ++.++..+++.. ++.+.|.+.|+
T Consensus 34 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~ 95 (110)
T 1um1_A 34 GAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKKMRFLVAKS 95 (110)
T ss_dssp CCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSEEEEEEECC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 34678999999999999999 9999999999999997 477888888764 77788887764
No 449
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=6.3e-06 Score=70.11 Aligned_cols=59 Identities=14% Similarity=0.199 Sum_probs=50.6
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.++ +++||+|++|||+++.+ +.++..+++.. ++.+.|++.|+
T Consensus 38 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~ 99 (107)
T 1wf8_A 38 EKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT-KGNVRFVIGRE 99 (107)
T ss_dssp CEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-CSEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeC
Confidence 45789999999999999999 99999999999999985 77777888764 67888887663
No 450
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.99 E-value=4.1e-06 Score=72.36 Aligned_cols=57 Identities=19% Similarity=0.312 Sum_probs=50.1
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.+| +++||+|++|||++|.+ +.++.++++... +.+.|++.|+
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 102 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRD 102 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeC
Confidence 478999999999999999 99999999999999988 788888888754 7788887764
No 451
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.99 E-value=6.7e-06 Score=71.53 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=50.7
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.++++|+.++ +++||+|++|||++|.++ .++..+++.. ++.+.|++.|+
T Consensus 45 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 106 (120)
T 2eno_A 45 NDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHR 106 (120)
T ss_dssp SCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 35689999999999999999 999999999999999984 4888888765 67788887764
No 452
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.98 E-value=5.1e-06 Score=70.88 Aligned_cols=60 Identities=8% Similarity=0.076 Sum_probs=45.9
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
..|++|..|.+++||+++ |++||+|++|||+++.++..- ++..++.. ..++.+.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~-~~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLA--------EAVEILKA-VPPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHH--------HHHHHHHH-SCSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh-CCCCeEEEEEEcC
Confidence 468999999999999986 999999999999999764321 12234433 3456899999884
No 453
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.98 E-value=9.5e-06 Score=68.98 Aligned_cols=59 Identities=10% Similarity=0.121 Sum_probs=49.6
Q ss_pred CcceEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+ ++++||+|++|||+++.+ +.++.++++. .++.+.|.+.|.
T Consensus 39 ~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 100 (107)
T 1uhp_A 39 SSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLRR 100 (107)
T ss_dssp CSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEEC
T ss_pred CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEeC
Confidence 4567899999999999999 999999999999999976 6777788876 466787777653
No 454
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.97 E-value=5.5e-06 Score=70.95 Aligned_cols=57 Identities=14% Similarity=0.321 Sum_probs=49.4
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.+| ++.||+|++|||++|. ++.++.++++.. ++.+.|++.|+
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GNSVRMLVARD 97 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CSEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 468999999999999999 9999999999999998 568999999874 67777777653
No 455
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.97 E-value=4e-06 Score=70.44 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=48.9
Q ss_pred ceEEEEEEeeccccccc-cccCCceEEeeCCeecCCH-HHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIENL-KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~~-~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+.+ ++++||+|++|||+++.++ .++.++++.. ++.+.|++.|+
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~ 93 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRRR 93 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEEC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEeC
Confidence 46889999999999999 9999999999999999985 6677777764 67788888764
No 456
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.97 E-value=5.8e-06 Score=78.62 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=50.8
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEEE
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKEH 412 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~~ 412 (590)
..|++|..|.++|||+++ |++||+|++|||+++. ++.++ ..++.. .++.+.|+|.|+++.+
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~R~~~~~ 198 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEA----------MSILKQ--CGQEATLLIEYDVSVM 198 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH----------HHHHHT--TCSEEEEEEEEEEEC-
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEEEEEECCccC
Confidence 368999999999999986 9999999999999999 66654 255544 7899999999987754
No 457
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=3.9e-06 Score=70.77 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=49.8
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||+++.+ +.++.++++ ..++.+.|++.|+
T Consensus 35 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 95 (103)
T 1wfv_A 35 KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRG 95 (103)
T ss_dssp TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECT
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEEC
Confidence 3578999999999999999 99999999999999988 577777887 5677888887764
No 458
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=3.8e-06 Score=70.06 Aligned_cols=56 Identities=11% Similarity=0.124 Sum_probs=47.9
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.+++||+ +++++||+|++|||++|.+ +.++...++. .++.+.|++.|+
T Consensus 31 ~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 88 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRC 88 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEEC
T ss_pred CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 456888999999996 8999999999999999977 7777788876 678888888775
No 459
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=4.9e-06 Score=71.78 Aligned_cols=54 Identities=9% Similarity=0.079 Sum_probs=46.5
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.+|+++||+|++|||++|.+ |+++.++++. +.+.|++.|
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R 99 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRT 99 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEE
Confidence 57899999999999999999999999999999998 6788888874 366666654
No 460
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.95 E-value=2.2e-06 Score=82.50 Aligned_cols=60 Identities=25% Similarity=0.442 Sum_probs=50.4
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEec--CCCcccccccccchHHHHhhccCCCCEE-EEEEEeCCEEE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTVAFRNRERITFDHLVSMKKPNEKS-LVRVLRDGKEH 412 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~--~~~~v~~~~~~~~~~~~~~~~~~~g~~v-~l~V~R~g~~~ 412 (590)
.|++|..|.+++||+++ |++||+|++|||++|. ++.++. .++... |+.+ .|+|.|+|+..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~----------~~l~~~--g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIRAG--GDETKLLVVDRETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHH----------HHHHHH--CSEEEEEECCHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhc--CCeEEEEEEEECCEEE
Confidence 58999999999999999 9999999999999999 666542 455443 7888 99999988765
No 461
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.94 E-value=5.8e-06 Score=70.33 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=44.0
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|+.|.+++||+.+| +++||+|++|||++|.+. .+...+++ .+++.+.|++.|
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~-~~~~~v~l~v~R 83 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK-GANGKVSMEVTR 83 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHH-SCBSCEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh-CCCCeEEEEEEe
Confidence 568999999999999999 999999999999999863 34444444 345567777655
No 462
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.94 E-value=9.6e-06 Score=68.43 Aligned_cols=56 Identities=14% Similarity=0.128 Sum_probs=45.4
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.+| +++||+|++|||+++. ++.++...++. .++.+.|.+.|
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r 93 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQY 93 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEE
Confidence 478999999999999999 9999999999999995 45666666665 45666666554
No 463
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.94 E-value=5.7e-06 Score=68.79 Aligned_cols=58 Identities=7% Similarity=0.134 Sum_probs=49.3
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.++ +++||+|++|||+++.++ .++.++++. .++.+.|++.|+
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~ 92 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRR 92 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 4678999999999999999 999999999999999965 677777776 777888887663
No 464
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.93 E-value=0.00086 Score=62.20 Aligned_cols=161 Identities=10% Similarity=0.101 Sum_probs=98.1
Q ss_pred HHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEE--EEEecC--
Q 007765 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH-- 185 (590)
Q Consensus 110 ~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~--vv~~d~-- 185 (590)
.-+++.++.|.+.. +.-|+.-|.+.+.|-..|...+. .+.+ +++.++.. ..-+|+
T Consensus 9 ~l~~~n~~~i~~~~----------------g~~t~Lgi~~~~~lvP~Ha~~~~---~i~i--~g~~v~i~d~~~l~d~~g 67 (180)
T 1cqq_A 9 SLIKHNSCVITTEN----------------GKFTGLGVYDRFVVVPTHADPGK---EIQV--DGITTKVIDSYDLYNKNG 67 (180)
T ss_dssp HHHHHHEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEEEEEEECTTS
T ss_pred HHHHhCeEEEEEcC----------------CcEEEEEEeeEEEEEccCcCccc---EEEE--CCEEEEeccceEEEcCCC
Confidence 34556677777632 33788888899999999999874 3333 44444333 223343
Q ss_pred -CCCeEEEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCC
Q 007765 186 -ECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPG 264 (590)
Q Consensus 186 -~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G 264 (590)
..||+|++++..+-..++.. -+.+.......++.+-+-.......+..|.+....... ..+......+.++++..+|
T Consensus 68 ~~~El~lv~l~~~~kfrDi~k-fip~~~~~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~-~~g~~~~r~l~Y~~pT~~G 145 (180)
T 1cqq_A 68 IKLEITVLKLDRNEKFRDIRR-YIPNNEDDYPNCNLALLANQPEPTIINVGDVVSYGNIL-LSGNQTARMLKYSYPTKSG 145 (180)
T ss_dssp CEEEEEEEEECSSCCBCCGGG-GSCSSCCCEEEEEEEECTTSSSCEEEEEEEEEECCCEE-ETTEEECSEEEECCCCCTT
T ss_pred CeEEEEEEEcCCccccCccHh-hcCCCcCCCCceEEEEEcCCCceEEEEccceeeeeeEe-cCCcEeccEEEecCCCCCC
Confidence 36999999987642234432 13332221122333333222222235666655433322 2333344678999999999
Q ss_pred CCCceEEeCCEEEEEEeeecCCCCceeEEeeh
Q 007765 265 NSGGPAIMGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 265 ~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
+-||+|+.+|+++||+.++ ....||+.++
T Consensus 146 ~CGsvl~~~gkIiGIHvAG---~G~~G~aa~l 174 (180)
T 1cqq_A 146 YCGGVLYKIGQVLGIHVGG---NGRDGFSAML 174 (180)
T ss_dssp CTTCEEEETTEEEEEEEEE---CSSCEEEEEC
T ss_pred cCCCeEEECCCEEEEEECC---CCCcEEEeee
Confidence 9999999888999999996 3467787764
No 465
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.92 E-value=3.5e-05 Score=63.62 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=49.8
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
..++|..|.++++|++. |++||.|++|||+.+..+..- ++..++.....|.+++|++.+
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~--------evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHY--------DVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHHSCTTCEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHH--------HHHHHHHhCCCCCEEEEEEEC
Confidence 45789999999999987 999999999999999998753 345677777788888888876
No 466
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=97.92 E-value=9.7e-06 Score=66.38 Aligned_cols=65 Identities=26% Similarity=0.370 Sum_probs=46.0
Q ss_pred hcCCCCCcCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 333 NFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 333 ~lgl~~~~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
.+|+.- ..|++|..|.++|||+++ |++||+|++|||+++.+...- ++..++.. .++++.|++.+.
T Consensus 14 ~~G~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~i~~--~~~~v~L~v~~~ 80 (88)
T 3e17_A 14 EYGLRL-GSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLT--------DARKLIEK--SRGKLQLVVLRD 80 (88)
T ss_dssp CCCEEE-EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--TTTEEEEEECCC
T ss_pred CCCEEE-eCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEeCC
Confidence 344432 358999999999999987 999999999999999543221 12244433 355788887653
No 467
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.91 E-value=1.4e-05 Score=74.00 Aligned_cols=59 Identities=14% Similarity=0.251 Sum_probs=47.1
Q ss_pred cCceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeC
Q 007765 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRD 408 (590)
Q Consensus 340 ~~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~ 408 (590)
..|++|..|.+++||+++ |++||+|++|||+++.++... ++..++.. .|+.+.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~--------~~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS--------FAASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHH--------HHHHHHHH--CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEeC
Confidence 368999999999999987 999999999999999766432 12234433 678999999985
No 468
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.91 E-value=8.6e-06 Score=87.06 Aligned_cols=62 Identities=18% Similarity=0.116 Sum_probs=51.0
Q ss_pred CceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||++|.+...- ++..++.....|+.+.|+|.|+|+
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~--------e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIRE--------EAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHH--------HHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcCCCCEEEEEEEECCc
Confidence 68999999999999999 999999999999999884221 122555555689999999999764
No 469
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.91 E-value=0.00059 Score=63.75 Aligned_cols=160 Identities=12% Similarity=0.131 Sum_probs=95.2
Q ss_pred HHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEE--EEEecC--
Q 007765 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH-- 185 (590)
Q Consensus 110 ~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~--vv~~d~-- 185 (590)
.-+++.+|.|.+. .+.-||..|.++++|.+.|...+ +.+. . +++.+... ..-.|.
T Consensus 9 sl~k~N~~~vtt~----------------~G~ft~LgI~dr~~lvP~Ha~~~-~ti~--i--~g~~~~v~d~~~l~~~~~ 67 (190)
T 3zve_A 9 AIMKKNTVVARTE----------------KGEFTMLGVHDRVAVIPTHASVG-ETIY--I--NDVETKVLDACALRDLTD 67 (190)
T ss_dssp HHHHHHEEEEEET----------------TEEEEEEEEEBTEEEEEGGGCCC-SEEE--E--TTEEEEEEEEEEEECTTC
T ss_pred HHHHcCEEEEEeC----------------CEEEEEEEEeCCEEEEecCCCCC-cEEE--E--CCEEEEeeEEEEEEcCCC
Confidence 3445677777652 24468888999999999997643 3333 3 44443321 111233
Q ss_pred -CCCeEEEEecCCcccCcceeEEcCCCC-CCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccC
Q 007765 186 -ECDLAILIVESDEFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINP 263 (590)
Q Consensus 186 -~~DlAlLkv~~~~~~~~~~~~~l~~~~-~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~ 263 (590)
..||++++++..+-..++... |.+.. ...+.+.++-.+.. ....+..|.+..... ....+......+.++++..+
T Consensus 68 ~~~Dlt~v~l~~~~kFRDIr~~-~~~~~~~~~~~~l~i~s~~~-~~~~~~v~~v~~~~~-i~l~g~~~~~~~~Y~~pT~~ 144 (190)
T 3zve_A 68 TNLEITIVKLDRNQKFRDIRHF-LPRYEDDYNDAVLSVHTSKF-PNMYIPVGQVTNYGF-LNLGGTPTHRILMYNFPTRA 144 (190)
T ss_dssp CEEEEEEEEECCSSCBCCCGGG-SCSSCCCEEEEEEEECSSSC-SSEEEEEEEEEEEEE-EEETTEEEEEEEEESSCCCT
T ss_pred CeEEEEEEEcCCCcccCchHHh-ccccCCCCCCeEEEEECCCC-cceEEecccceEece-eecCCCeeeeeEEEecCCCC
Confidence 459999999876422334321 33322 22344444433322 222334455543322 22233444467889999999
Q ss_pred CCCCceEEeCCEEEEEEeeecCCCCceeEEeeh
Q 007765 264 GNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 264 G~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
|+-||||+.+|+++||..++. ...||+.++
T Consensus 145 G~CG~~li~~gkI~GiHvaG~---G~~g~~~~l 174 (190)
T 3zve_A 145 GQCGGVVTTTGKVIGIHVGGN---GAQGFAAML 174 (190)
T ss_dssp TCTTCEEEETTEEEEEEEEEC---SSCEEEEEC
T ss_pred CccCCeEEECCCEEEEEECcC---CCceEehhh
Confidence 999999999999999999863 356777654
No 470
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.91 E-value=9.9e-06 Score=70.26 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=50.2
Q ss_pred eEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhc---CCCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENC---SSENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~---~~~~v~l~~~r~ 539 (590)
.++|..|.+++||+.+ ++++||+|++|||+++.+ ++++.++++.. +++.++|++.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 3789999999999999 999999999999999998 88999999875 377888887763
No 471
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.91 E-value=1.5e-05 Score=64.92 Aligned_cols=54 Identities=13% Similarity=0.226 Sum_probs=45.5
Q ss_pred ceEEEEEEeecccccc-ccccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEe
Q 007765 482 QLVILSQVLMDDINAG-YERFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g-~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~ 536 (590)
.+++|..|.+++||+. +++++||+|++|||+++ .++.++.+++++ .++.++|++
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v 84 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ-QRGEIEFEV 84 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEE
Confidence 5689999999999998 69999999999999999 566888888885 455566654
No 472
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.89 E-value=1.5e-05 Score=73.86 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=51.9
Q ss_pred CcceEEEEEEeecccccccc-ccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
...+++|..|.+++||+.+| ++.||+|++|||+++ .++.+++++++. .+..++|++.|+
T Consensus 109 ~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 109 EKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp SSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 45789999999999999999 999999999999999 778899999987 667888887663
No 473
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.89 E-value=1.2e-05 Score=75.95 Aligned_cols=59 Identities=8% Similarity=0.164 Sum_probs=53.5
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCCeE
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDDRV 541 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~~~ 541 (590)
..+++|..|.+++||+.+|+++||+|++|||++|.+ ++++.++++. ++.+.|++.|+..
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRHIGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEECCc
Confidence 357899999999999999999999999999999999 9999999987 7889999888644
No 474
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=9.7e-06 Score=68.74 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=48.6
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+++++||+|++|||+++.+ +.++...++.. ++.+.+.+.|+
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~ 90 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS-GSRVMFLLVDK 90 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH-CSEEEEEECCT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 456789999999999999999999999999999984 57888888764 56777777663
No 475
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.88 E-value=1.5e-05 Score=83.86 Aligned_cols=57 Identities=19% Similarity=0.258 Sum_probs=48.0
Q ss_pred ceEEEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 342 GVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 342 gv~V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.++|..|.++|||++| |++||+|++|||++|.++. +. .++.. .|.+++|+|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~----------~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ES----------ELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GG----------GGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HH----------HHhhC--CCCEEEEEEEeCCcc
Confidence 3678999999999999 9999999999999999985 32 44533 899999999997754
No 476
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.87 E-value=1.4e-05 Score=67.44 Aligned_cols=56 Identities=13% Similarity=0.208 Sum_probs=47.1
Q ss_pred ceEEEEEEeeccccccc-cccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGY-ERFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~-~~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r 538 (590)
.+++|..|.++++|+.+ +++.||+|++|||+++.+ +.++.++++...+ .++|++.+
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 93 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG-EIEFEVVY 93 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCS-EEEEEEEE
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-cEEEEEEe
Confidence 47899999999999995 999999999999999955 8999999987654 56666543
No 477
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.87 E-value=1.8e-05 Score=69.33 Aligned_cols=57 Identities=11% Similarity=0.112 Sum_probs=44.5
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
.+++|..|.++|||+++ |++||+|++|||+++.++... ++..++.. .++++.|+|.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKV--------EVAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--SCSEEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEE
Confidence 57899999999999987 999999999999999855321 12234433 45679999988
No 478
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.09 E-value=1.9e-06 Score=74.14 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=31.7
Q ss_pred CceEEEEeCCCChhhh-c-cCCCCEEEEECCEEecC
Q 007765 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAN 374 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~~ 374 (590)
.|++|..|.++|||++ + |++||+|++|||++|.+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD 88 (112)
Confidence 4789999999999999 8 99999999999999955
No 479
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.87 E-value=0.0011 Score=61.63 Aligned_cols=161 Identities=11% Similarity=0.114 Sum_probs=96.7
Q ss_pred HHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCCcEEEEEEcCCCcEEEEEE--EEecC--
Q 007765 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQV--EAVGH-- 185 (590)
Q Consensus 110 ~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~~~i~V~~~~~~~~~~a~v--v~~d~-- 185 (590)
..+++.+|.|.+ ..+.-||.-|-+++.|-..|.-. .+.+. + +|+.++..- .-.+.
T Consensus 16 sl~k~N~~~vtT----------------~~G~ft~LgI~d~~~viP~Ha~p-~~~i~--i--~G~~~~v~d~~~l~~~~g 74 (190)
T 4dcd_A 16 AMAKRNIVTATT----------------SKGEFTMLGVHDNVAILPTHASP-GESIV--I--DGKEVEILDAKALEDQAG 74 (190)
T ss_dssp HHHHHHEEEEEE----------------TTEEEEEEEEEBTEEEEEGGGCC-CSEEE--E--TTEEEEEEEEEEEECTTC
T ss_pred HHHHcCeEEEEe----------------CCeEEEEEEEECcEEEEeCCCCC-CcEEE--E--CCEEEEeeEEEEEecCCC
Confidence 344567777765 22456899999999999999543 34333 3 566554421 12233
Q ss_pred -CCCeEEEEecCCcccCcceeEEcCCCCCCCCeEEEEecCCCCCCceEEEeEEecccccccccCcceeeEEEEcccccCC
Q 007765 186 -ECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPG 264 (590)
Q Consensus 186 -~~DlAlLkv~~~~~~~~~~~~~l~~~~~~G~~V~~iG~p~g~~~~~v~~G~Vs~~~~~~~~~~~~~~~~i~~~~~i~~G 264 (590)
..||++++++..+-+.++... |.+......++..+=+........+..|.+...... ...+......+.++++..+|
T Consensus 75 v~lElt~V~l~r~~kFRDIr~f-i~~~~~~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i-~lsg~~t~r~l~Y~~pT~~G 152 (190)
T 4dcd_A 75 TNLEITIITLKRNEKFRDIRPH-IPTQITETNDGVLIVNTSKYPNMYVPVGAVTEQGYL-NLGGRQTARTLMYNFPTRAG 152 (190)
T ss_dssp CEEEEEEEEESSSCCBCCCGGG-SCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTT
T ss_pred CeEEEEEEEcCCCccccchhHh-ccccCCCCCceEEEEecCCCccEEEEeeeeEEeccc-cCCCCcccceEEEccCCCCC
Confidence 359999999987433344331 222222222333322222222233444555433322 22344455688999999999
Q ss_pred CCCceEEeCCEEEEEEeeecCCCCceeEEeeh
Q 007765 265 NSGGPAIMGNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 265 ~SGGPl~~~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
.-||||+.+|+++||..++. ...||+.++
T Consensus 153 ~CGg~l~~~gkIlGIHvaG~---G~~G~aa~L 181 (190)
T 4dcd_A 153 QCGGVITCTGKVIGMHVGGN---GSHGFAAAL 181 (190)
T ss_dssp CTTCEEEETTEEEEEEEEEC---SSCEEEEEC
T ss_pred ccCCEEEeCCCEEEEEECCC---CCceEeeeh
Confidence 99999999999999999963 456777654
No 480
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.84 E-value=2.7e-05 Score=62.80 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=42.5
Q ss_pred EEEeCCCChhhhc-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEe
Q 007765 345 VNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLR 407 (590)
Q Consensus 345 V~~V~~~s~A~~a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R 407 (590)
|..|.+++||+++ |++||+|++|||+.+.....- +..+++. ..|.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~--------evv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDS--------QIADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHH--------HHHHHHH--HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHH--------HHHHHHh--cCCCEEEEEEEe
Confidence 6789999999999 999999999999999877532 1224443 578889999864
No 481
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.83 E-value=1.5e-05 Score=69.70 Aligned_cols=58 Identities=3% Similarity=0.045 Sum_probs=48.1
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecCC--HHHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN--LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~--~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| +++||+|++|||++|.+ +.++..+++.. ++.+.|++.|+
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~ 110 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA-PSKVKLVFIRN 110 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS-CSEEEEEEEEC
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 3578999999999999999 99999999999999966 77777778765 34677776553
No 482
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.82 E-value=1.2e-05 Score=69.71 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=46.2
Q ss_pred CceEEEEeCCCChhhhc---cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccC--CCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI---LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKK--PNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a---L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~--~g~~v~l~V~R~g~ 410 (590)
.|++|..|.++|||+++ |++||+|++|||++|.++... ++..++.... .+..+.|+|.|+..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~--------~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHD--------QVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHH--------HHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhccccCCCEEEEEEEcccc
Confidence 47899999999999984 999999999999999886432 1223332221 13589999999754
No 483
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.82 E-value=1.2e-05 Score=71.13 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=46.9
Q ss_pred CceEEEEeCCCChhhhc--cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCE
Q 007765 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGK 410 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~ 410 (590)
.+++|..|.+++||+++ |++||+|++|||+++.++..- ++..++. ...+..+.|+|.|++.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~--------~~~~~l~-~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRF--------EAWNIIK-ALPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHH--------HHHHHHH-TSCSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH-hCCCceEEEEEEeCCC
Confidence 57999999999999987 999999999999999986321 1223443 2346679999988643
No 484
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.81 E-value=1.6e-05 Score=75.42 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=53.2
Q ss_pred cceEEEEEEeecccccccc-ccCCceEEeeCCeecC--CHHHHHHHHHhcC-CCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIE--NLKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+| ++.||+|++|||+++. +|.++.++++..+ ++.+.|++.|+
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 97 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFD 97 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 3567999999999999999 9999999999999999 7999999999887 78899988764
No 485
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.80 E-value=2.5e-05 Score=63.01 Aligned_cols=51 Identities=10% Similarity=0.245 Sum_probs=43.8
Q ss_pred EEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCceEEEe
Q 007765 485 ILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 485 vl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v~l~~ 536 (590)
.|..+.+++||+.+|++.||+|++|||+.+. +.++.+++|+ ..+..++|++
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v 78 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITI 78 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEE
Confidence 3688999999999999999999999999995 5668888998 6777777765
No 486
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.80 E-value=1.9e-05 Score=68.23 Aligned_cols=58 Identities=21% Similarity=0.206 Sum_probs=49.1
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
+..+++|..|.++++|+ +++++||+|++|||++|.++ .++..+++. .++.+.|++.|+
T Consensus 44 ~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 103 (117)
T 2csj_A 44 GETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRP 103 (117)
T ss_dssp CCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEE
T ss_pred CCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEEC
Confidence 35678999999999996 88999999999999999874 677777776 577888888775
No 487
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.79 E-value=3.9e-05 Score=83.41 Aligned_cols=89 Identities=6% Similarity=-0.021 Sum_probs=69.5
Q ss_pred eeccEEEeeC-CHHHHHHhCCCccCCChhhhHHHHHhcCCccCCcceEEEEEEeeccccccccccCCceEEeeCCeecCC
Q 007765 438 IFAGLVFIPL-TQPYLHEYGEDWYNTSPRRLCERALRELPKKAGEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN 516 (590)
Q Consensus 438 ~~~Gl~~~~l-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~ 516 (590)
.|+|+.++++ ++.+.+.++.+ ..+|++|.+|.+++||+++ +++||+|++|||++|.+
T Consensus 253 ~~LGv~~~~~~~~~~~~~~~l~---------------------~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~ 310 (539)
T 4fln_A 253 PCLGVLLQKLENPALRECLKVP---------------------TNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGC 310 (539)
T ss_dssp CBCCEEEEECCCHHHHHHHTCS---------------------SSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBS
T ss_pred eecceEEEecCCHHHHHhcCCC---------------------CcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCc
Confidence 3679998886 56666666664 4589999999999999876 99999999999999976
Q ss_pred HHH----------HHHHHHh-cCCCceEEEeCC-CeEEEEEech
Q 007765 517 LKH----------LCQLVEN-CSSENLRFDLDD-DRVVVLNYDV 548 (590)
Q Consensus 517 ~~~----------l~~~v~~-~~~~~v~l~~~r-~~~i~l~~~~ 548 (590)
..+ |..++.. .+|+.+++++.| |+.+.+.++.
T Consensus 311 ~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl 354 (539)
T 4fln_A 311 EGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVL 354 (539)
T ss_dssp SSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEE
Confidence 543 6666665 578899999988 4655555543
No 488
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.73 E-value=2.5e-05 Score=67.65 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=44.9
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCCHHHHHHHH-HhcCCCceEEEeCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENLKHLCQLV-ENCSSENLRFDLDD 538 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~~~l~~~v-~~~~~~~v~l~~~r 538 (590)
.+++|..|.+++||+.+| +++||+|++|||+++.+|.++.... ....++.+.+.+.|
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 96 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQY 96 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 578999999999999999 9999999999999999986543332 22356666666654
No 489
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.73 E-value=1.5e-05 Score=67.38 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=45.3
Q ss_pred ceEEEEeCCCChhhhc--cCCCCEEEEECCEEecC--CCcccccccccchHHHHhhc---cCCCCEEEEEEEeCCE
Q 007765 342 GVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTVAFRNRERITFDHLVSM---KKPNEKSLVRVLRDGK 410 (590)
Q Consensus 342 gv~V~~V~~~s~A~~a--L~~GD~Il~VnG~~v~~--~~~v~~~~~~~~~~~~~~~~---~~~g~~v~l~V~R~g~ 410 (590)
+++|..|.+++||+++ |++||+|++|||+++.+ |.++ ..++.. ...++.+.++|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREA----------ARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHH----------HHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHHhcccCCCCeEEEEEEEccc
Confidence 4589999999999987 99999999999999977 4433 233432 2257788999988653
No 490
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.72 E-value=6.6e-05 Score=70.84 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=48.1
Q ss_pred CcceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCC
Q 007765 480 GEQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDD 538 (590)
Q Consensus 480 ~~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r 538 (590)
...+++|..|.+++||++ ++++||+|++|||++|.++ .+....++.. ++.+.|.+.|
T Consensus 22 ~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 80 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF-QNTVELIIVR 80 (195)
T ss_dssp TCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 457899999999999999 9999999999999999884 5666666665 4488888877
No 491
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.67 E-value=0.00078 Score=64.34 Aligned_cols=171 Identities=15% Similarity=0.142 Sum_probs=99.2
Q ss_pred HHHHHHhCCCcEEEEeeecCCCCCCCccCCCCCCceEEEEEEeCCeEEEcCcccCCC---cEE--EEEEcCCCcEEEEE-
Q 007765 106 YAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFV--LVRKHGSPTKYRAQ- 179 (590)
Q Consensus 106 ~~~~~~~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GsGfiI~~g~IlT~aHvv~~~---~~i--~V~~~~~~~~~~a~- 179 (590)
.++...+.+-.|+|...... ......++|..|.+.++|...|..... ..+ .+.. +|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~----------~~~~~~~t~LgI~~r~~lvP~H~~~~~~~~~~~~~~i~i--~g~~~~~~~ 70 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKN----------GSVRWVMNALGVKDDWLLVPSHAYKFEKDYEMMEFYFNR--GGTYYSISA 70 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETT----------SCCEEEEEEEEEEBTEEEEEGGGTTTSTTGGGEEEEEEE--TTEEEEEEG
T ss_pred eeehhhhhccEEEEEEeCCC----------CCcceEEEEEEEcCCEEEEecccCcccccccccceEEEE--CCEEEeecc
Confidence 45667788888999886421 223346899999999999999997522 122 3444 56666553
Q ss_pred ----EEEec-CCCCeEEEEecCC-cccCcceeEEcCCC---CCCCC-eEEEEecCCCCCCceEEEe------EEeccccc
Q 007765 180 ----VEAVG-HECDLAILIVESD-EFWEGMHFLELGDI---PFLQQ-AVAVVGYPQGGDNISVTKG------VVSRVEPT 243 (590)
Q Consensus 180 ----vv~~d-~~~DlAlLkv~~~-~~~~~~~~~~l~~~---~~~G~-~V~~iG~p~g~~~~~v~~G------~Vs~~~~~ 243 (590)
+...| ...||++++++.. .|. ++... |.+. +..++ .+.+++...+.. .....+ .++...
T Consensus 71 ~~v~~~~~d~~~~Dl~lv~Lp~~~~Fr-DIrk~-f~~~~~~~~~~~~~~lv~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 145 (212)
T 2hal_A 71 GNVVIQSLDVGFQDVVLMKVPTIPKFR-DITQH-FIKKGDVPRALNRLATLVTTVNGTP-MLISEGPLKMEEKATYVH-- 145 (212)
T ss_dssp GGSEEECSSSSCCSEEEEECTTSCCBC-CCGGG-BCCGGGGGGTTTSCEEEEEEETTEE-EEEEECSCEEEEEEEEEE--
T ss_pred ccceeEeccCCCceEEEEECCCCCccC-ChhHh-cCCcccccccccceEEEEeccCCCc-eEEecccccccceeeEEE--
Confidence 33333 4689999999764 333 33321 1111 12233 333332211111 011111 111000
Q ss_pred ccccCccee----eEEEEcccccCCCCCceEE-e----CCEEEEEEeeecCCCCceeEEeeh
Q 007765 244 QYVHGATQL----MAIQIDAAINPGNSGGPAI-M----GNKVAGVAFQNLSGAENIGYIIPV 296 (590)
Q Consensus 244 ~~~~~~~~~----~~i~~~~~i~~G~SGGPl~-~----~G~vVGI~~~~~~~~~~~~~aip~ 296 (590)
....+.... ..+.++++..+|+-||||+ . .|+++||+.++. .+.|||.++
T Consensus 146 i~~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~---g~~G~a~~l 204 (212)
T 2hal_A 146 KKNDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG---NSILVAKLV 204 (212)
T ss_dssp ECTTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE---TTEEEEEEC
T ss_pred ecCCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC---CCcEEEEee
Confidence 011222222 5688899999999999999 4 799999999974 347888775
No 492
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.67 E-value=1.9e-05 Score=78.12 Aligned_cols=61 Identities=16% Similarity=0.122 Sum_probs=48.5
Q ss_pred CceEEEEeCCCChhhh-c-cCCCCEEEEECCEEecCCCcccccccccchHHHHhhccCCCCEEEEEEEeCCEE
Q 007765 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIANDGTVAFRNRERITFDHLVSMKKPNEKSLVRVLRDGKE 411 (590)
Q Consensus 341 ~gv~V~~V~~~s~A~~-a-L~~GD~Il~VnG~~v~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~V~R~g~~ 411 (590)
.|++|..|.+++||++ + |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|.++.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e--------~v~~l~~--~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALKK--TGKEVVLEVKYMKEV 165 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHH--------HHHHHHH--CCSCCCEEEECCSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEeCccc
Confidence 5899999999999999 7 9999999999999999875321 2233332 478899999996653
No 493
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.66 E-value=3.9e-05 Score=80.66 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=53.0
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCC--HHHHHHHHHh-cCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIEN--LKHLCQLVEN-CSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~--~~~l~~~v~~-~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||+++.+ ++++..+++. .+++.++|++.|+
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeC
Confidence 368899999999999999999999999999999977 9999999998 6788888887654
No 494
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.66 E-value=1.9e-05 Score=67.60 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=46.4
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.++ +++||+|++|||+++.++ .++..+++. .++.+.|.+.|+
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~ 98 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR-AGQSVTIVAQYR 98 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS-CCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCcEEEEEEEC
Confidence 567889999999999999 999999999999999987 666666664 466666666553
No 495
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.64 E-value=1.6e-05 Score=76.44 Aligned_cols=57 Identities=16% Similarity=0.129 Sum_probs=51.1
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcCCCce-EEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCSSENL-RFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~~~~v-~l~~~r~ 539 (590)
.+++|..|.++++|+.+|++.||+|++|||++|. +++++.++++.. ++.+ .+.+.|+
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R~ 92 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRE 92 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEEC
Confidence 4678999999999999999999999999999999 999999999987 7777 7777663
No 496
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.63 E-value=5.1e-05 Score=72.23 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=50.7
Q ss_pred ceEEEEEEeecccccccc-ccCCceEEeeCCeecCC----HHHHHHHHHhcCCCceEEEeCCC
Q 007765 482 QLVILSQVLMDDINAGYE-RFADLQVKKVNGVEIEN----LKHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~-~~~gd~I~~VNG~~v~~----~~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
.+++|..|.++++|+.+| ++.||+|++|||+++.+ +.++..+++...+..+.|++.|+
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 107 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRA 107 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECC
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEec
Confidence 468999999999999998 99999999999999999 78888888876665588988774
No 497
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.63 E-value=9.3e-05 Score=63.36 Aligned_cols=55 Identities=4% Similarity=-0.026 Sum_probs=45.7
Q ss_pred eEEEEEEeeccccccccccCCceEEeeCCeecC--CHHHHHHHHHhcC-CCceEEEeCCC
Q 007765 483 LVILSQVLMDDINAGYERFADLQVKKVNGVEIE--NLKHLCQLVENCS-SENLRFDLDDD 539 (590)
Q Consensus 483 ~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~--~~~~l~~~v~~~~-~~~v~l~~~r~ 539 (590)
+.+|.+|++ ++..+++++||+|++|||++|. +++|++++|++++ ++.++|.+.|+
T Consensus 35 g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~ 92 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRG 92 (113)
T ss_dssp EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEES
T ss_pred CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 345778877 4667889999999999999999 5578999999875 77889988875
No 498
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.59 E-value=4.5e-05 Score=84.50 Aligned_cols=66 Identities=9% Similarity=0.070 Sum_probs=56.3
Q ss_pred ceEEEEEEeeccccccccccCCceEEeeCCeecCCHHHHHHHHHh-cCCCceEEEeCCC-eEEEEEech
Q 007765 482 QLVILSQVLMDDINAGYERFADLQVKKVNGVEIENLKHLCQLVEN-CSSENLRFDLDDD-RVVVLNYDV 548 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~~~l~~~v~~-~~~~~v~l~~~r~-~~i~l~~~~ 548 (590)
.+++|..|.+++||+.+|+++||+|++|||++| ++.+|.++++. .+++.++|++.|+ +.+.+.+..
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 563 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELMTLELTW 563 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEe
Confidence 478999999999999999999999999999999 68999999987 5778999999884 555554443
No 499
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.75 E-value=9.1e-06 Score=69.83 Aligned_cols=54 Identities=15% Similarity=0.234 Sum_probs=44.9
Q ss_pred ceEEEEEEeecccccc-ccccCCceEEeeCCeec--CCHHHHHHHHHhcCCCceEEEe
Q 007765 482 QLVILSQVLMDDINAG-YERFADLQVKKVNGVEI--ENLKHLCQLVENCSSENLRFDL 536 (590)
Q Consensus 482 ~~vvl~~V~~~s~a~g-~~~~~gd~I~~VNG~~v--~~~~~l~~~v~~~~~~~v~l~~ 536 (590)
.+++|..|.+++||+. +++++||+|++|||++| .++.++.++++...+. ++|++
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~-v~l~V 109 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE-IEFEV 109 (112)
Confidence 4678999999999999 89999999999999999 5588888888765433 55543
No 500
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.51 E-value=8.8e-05 Score=78.00 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=53.5
Q ss_pred cceEEEEEEeeccccccccccCCceEEeeCCeecCCH--HHHHHHHHhcCCCceEEEeCCC
Q 007765 481 EQLVILSQVLMDDINAGYERFADLQVKKVNGVEIENL--KHLCQLVENCSSENLRFDLDDD 539 (590)
Q Consensus 481 ~~~vvl~~V~~~s~a~g~~~~~gd~I~~VNG~~v~~~--~~l~~~v~~~~~~~v~l~~~r~ 539 (590)
..+++|..|.+++||+.+|+++||+|++|||++|.+| +++.++++..+++.++|++.|+
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 158 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEET
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeC
Confidence 3567899999999999999999999999999999997 8899999888888999999874
Done!