BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007766
(590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 349 EDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD---TSIYVSMISIW 405
+D+TL +++ K + +L + A SGL VI I QSL + D + V++ISI
Sbjct: 203 KDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIA 262
Query: 406 NFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSY 465
N GR+ G S+ I R R + + ++ A L +A + V ++
Sbjct: 263 NLSGRLVLGILSDKIAR----IRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNF 318
Query: 466 GAHWAIVPAAASELFGL----KSFGALYNFLTLASPAGSLIFS 504
G + P+ SE FGL K++G +Y + S GS+I S
Sbjct: 319 GGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIAS 361
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 32/244 (13%)
Query: 320 RIAHLQAKLFQAAAEGAVRVKRRKGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTV 379
R A A + AE + GP E TL + L V G
Sbjct: 234 RTAESMASELRKKAEASTDCNC-DGPGH-EGATLKEFFTDKTAWLFLLCFVFIGGPFEMF 291
Query: 380 IDNLGQICQSLGY--ADT---SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 434
+N+G I ++ AD+ S +VS+ + ++ + R+ G+ SEA+ + RPV ++V
Sbjct: 292 QNNMGAILDTVTVENADSPSFSTHVSLFATFSTVSRLVVGFSSEAMESHVS--RPVLLSV 349
Query: 435 AQVVMAFALLYYAIG----WPGEIY--VTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 488
+V A L G + Y V T++ G SYG+ + +VP ++++G+ + G +
Sbjct: 350 IALVAACIHLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTI 409
Query: 489 YNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSIC 548
+ LA GSL + G++ + +YD +E G + + C G C
Sbjct: 410 WGSFILALAVGSLGY-GLLFAKVYDAASEVGVGSM----------------SQVCSGVHC 452
Query: 549 YSIT 552
Y +T
Sbjct: 453 YGLT 456
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 364 LLFFSLVLASGSGLTVIDNLGQICQSLG-YADTSIYVSMISIWNFLGRVGGGYFSEAIVR 422
+L FSL+L+ G I N+G + +++ + S V++ ++++ L R+ G S+ +V
Sbjct: 266 VLLFSLLLSIGPSEMYITNMGSLVKAITPNSLISDQVAIHAVFSTLSRLSLGALSDFLVT 325
Query: 423 KFAYPRPVAMAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELF 480
+ R + V+ F ++ A + Y+ + L G SYG + + P ++
Sbjct: 326 NYQISRSWLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGLFTLYPTVIFSIW 385
Query: 481 GLKSFGALYNFLTLASPAGSLIFSGVIASGIYD----YYAEKQAGLLWKYNGNMLPVSFR 536
G + FG+ + +A GS F G++ +YD +AE GN + + F
Sbjct: 386 GPEIFGSAWGSFMIAPAIGSTTF-GMVFGLVYDSACGVFAEST-------TGNCVSLVFL 437
Query: 537 DQ 538
DQ
Sbjct: 438 DQ 439
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 21 CSMWIQSC--AGIGYLFGSISPVIKAHMGYNQRQVSLLGVAKDLG-----DSIGFVPGTF 73
CS+ + SC AG LF +PV++ + Y Q Q++++G +G +G++
Sbjct: 32 CSISLISCLCAGSVLLFALFTPVLQHQLHYTQFQINIIGSFTSIGMYLPLPVLGYLADCH 91
Query: 74 VEILPVWSINLIGVLQNFVGYGLVWLIVTNRLPSLPLWVLCIAI-FVGTNGETYFNTAAL 132
+L +++I VL GY L +V N W L I+ +G + T AL
Sbjct: 92 GPVL----LSVISVLFFSPGYTLAATVVQN---DWSFWYLAISFGLIGCATSALYFT-AL 143
Query: 133 VSCVQNFPKSRGPVVGILKGFAGLSGAILTQI 164
++C + +PKS+G + GLS I +++
Sbjct: 144 LTCAKIYPKSKGLTISAPVTCYGLSSLIGSRV 175
>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
SV=1
Length = 619
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 451 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 510
PG +VTT L+GL YG+ +++VP S ++G+++FG + + + AG+ ++ + + G
Sbjct: 506 PGLSHVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMWGVIYSRG 565
Query: 511 IYD 513
D
Sbjct: 566 YQD 568
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 47/250 (18%)
Query: 362 FLLLFFSLVLASGSGLTVIDNLGQICQSL---------GYADTSIYVSMISIWNFLGRVG 412
F L FF ++ G G I+NLG + ++L + +VS++ I + L R+
Sbjct: 360 FALGFFLMI---GPGEAFINNLGTVIKTLYPPHLKFVGEPTSAATHVSIVGITSTLVRLL 416
Query: 413 GGYFSEAIV------------------RKFAYPRPVAMAVAQVVMAFALLYYAIGW---P 451
G ++ + ++F+ R + V ++ L A GW
Sbjct: 417 TGSLTDLLAPSPQARHVQITSSGTLERKRFSLSRVSFLLFFAVTLSVGLATLASGWIQNH 476
Query: 452 GE-IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 510
GE +V + LVG YGA +++ P + ++G+++F + + + PA F G++ S
Sbjct: 477 GERFWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMF-PALGATFWGLVYSA 535
Query: 511 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 570
+Y EK A NG +E C GS CY+ MA +A + ++
Sbjct: 536 VYQSGVEKAAS-----NGQ------GGEEDQFCYGSECYASAFWAMAASVWVACGL-VLW 583
Query: 571 VHRTKSVYAQ 580
+ K+ +AQ
Sbjct: 584 AWKGKNGWAQ 593
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 39.7 bits (91), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 100/512 (19%), Positives = 182/512 (35%), Gaps = 85/512 (16%)
Query: 29 AGIGYLFGSISPVIKAHMGYNQRQVSLLGVAKDLGDSI-GFVPGTFVEILPVWSINLIGV 87
AG YLF +P + + S L + +G S+ G + G V+ P S LIG
Sbjct: 32 AGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDRSPKLSC-LIGS 90
Query: 88 LQNFVGYGLVWLIVTNRLPSLPLWVLCIAIFVGTNGETYFNTAALVSCVQ-NFPKSRGPV 146
+ F+ Y ++ L + S L L + + +G + F A V C NFP+ RG
Sbjct: 91 MCVFIAYLILNLCYKHEWSSTFLISLSL-VLIGYGSVSGF--YASVKCANTNFPQHRGTA 147
Query: 147 VGILKGFAGLSGAILTQIYIMISANETSLIFLVAVGPSIVVMAFMFIVRPIGGHRQVRLS 206
GLSG + + + + +F+
Sbjct: 148 GAFPVSLYGLSGMVFSYLCSKLFGENIEHVFI---------------------------- 179
Query: 207 DNTSFLFTYTVCLILAAYMLAVLLL----EDLEVANQNVLTVLAVGLIIIILLPVTIPVV 262
FL C+IL Y + +D + + I+ L + +
Sbjct: 180 ----FLMVACGCMILVGYFSLDIFSNAEGDDASIKEWELQKSRETDDNIVPLYENSNDYI 235
Query: 263 LVFFTEPPPPVEETLLAETNKGEASKSEDYQEEVILSEVEDEKPPEVDSL-PASERQKRI 321
P ET + S+++QE +ED + L P+S K
Sbjct: 236 GSPVRSSSPATYETY---------ALSDNFQETSEFFALEDRQLSNRPLLSPSSPHTKYD 286
Query: 322 AHLQAKLFQAAAEGAVRVKRRKGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTVID 381
+ E + + R + Q+L + F+ + L + G GL I
Sbjct: 287 FEDENTSKNTVGENSAQKSMR--------LHVFQSLKSSTFIGYYIVLGILQGVGLMYIY 338
Query: 382 NLGQICQSL------------GYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 429
++G + Q+ S+ V+++S+ +F GR+ G S+ +V+KF R
Sbjct: 339 SVGFMVQAQVSTPPLNQLPINAEKIQSLQVTLLSLLSFCGRLSSGPISDFLVKKFKAQRL 398
Query: 430 VAMAVAQVVMAFA-----LLYYAIGWPG--------EIYVTTVLVGLSYGAHWAIVPAAA 476
+ +A +++ A + +I P I V + + G S+G + P+
Sbjct: 399 WNIVIASLLVFLASNKISHDFSSIEDPSLRASKSFKNISVCSAIFGYSFGVLFGTFPSIV 458
Query: 477 SELFGLKSFGALYNFLTLASPAGSLIFSGVIA 508
++ FG + L+ LT +F+ ++
Sbjct: 459 ADRFGTNGYSTLWGVLTTGGVFSVSVFTDILG 490
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 46/227 (20%)
Query: 360 ADFLLLFFSL--VLASGSGLTVIDNLGQICQSL------GYA---DTSIYVSMISIWNFL 408
AD + F+L +L G G I+NLG I +L G++ + +VS+ I N
Sbjct: 326 ADRTMWPFALAFLLIVGPGEAFINNLGTIIGTLTPPEMEGWSHRTSAATHVSIFGITNTA 385
Query: 409 GRVGGGYFSE------------------AIVRKFAYPRPVAMAVAQVVMAFALLYYAIG- 449
R+ G ++ A+ +F+ R MA +++ LL A G
Sbjct: 386 SRIFIGTLTDLLAPYPHTQHVQGPSTRSAVSSRFSISRVAFMAFFASMLSIGLLILASGL 445
Query: 450 ---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 506
++ + LVG YGA +++ P + ++G+++F Y + + AGS F G+
Sbjct: 446 VQNHAERFWLVSGLVGAGYGAIFSLTPLMVTIIWGVENFATNYGLIGMLPAAGS-TFWGL 504
Query: 507 IASGIYDYYAEK-QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSIT 552
+ S Y A K +AG P D++ C G CY+ T
Sbjct: 505 VYSATYQNGANKSKAG----------PEG-SDRDDLFCYGEQCYAPT 540
>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3
SV=2
Length = 615
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 39/196 (19%)
Query: 360 ADFLLLFFSL--VLASGSGLTVIDNLGQICQSLGYADTSI-----------YVSMISIWN 406
AD + + +L L +G G ++NLG I Q+L T+I +V++I++ +
Sbjct: 374 ADHTMWWLALGFFLVTGPGEAYLNNLGTIVQTLNLDTTAIVDSHPAGLPSTHVTIIALTS 433
Query: 407 FLGRVGGGYFSE----------AIVRKFAYPRP-VAMAVAQVVMAFALLYYA-------- 447
+ R+ G S+ + ++ A P P A +AF +
Sbjct: 434 TIARLLTGSLSDLFAPTARRHFTVDQETAGPDPFTKQRPALSRLAFLIPSALLLSLGFLL 493
Query: 448 ------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 501
P ++TT LVGL YG+ +++VP S ++G+++FG + + + AG+
Sbjct: 494 LASPLPTHHPELSHLTTALVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAA 553
Query: 502 IFSGVIASGIYDYYAE 517
++ GVI S Y A+
Sbjct: 554 MW-GVIYSRAYQSAAD 568
>sp|Q12697|YPK9_YEAST Vacuolar cation-transporting ATPase YPK9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YPK9 PE=1 SV=1
Length = 1472
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 175 LIFLVAVGPSIVVMAFMFIVRPI-GGHRQVRLSDNTSFLFTYTVCLILAAYMLAV 228
L+FL P I+V + ++PI GG V+ SDNT F IL A +L+V
Sbjct: 1320 LVFLFQFIPWIIVQKMSWYIKPIVGGDDAVQSSDNTVLFFVSNFQYILTAIVLSV 1374
>sp|B7GHW7|BIOF_ANOFW Putative 8-amino-7-oxononanoate synthase OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=bioF PE=3 SV=1
Length = 390
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 30/192 (15%)
Query: 375 SGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 434
SG T N+G I SL D I+ WN V G S A V+++ +
Sbjct: 105 SGYTA--NVG-ILSSLAGRDAVIFSDK---WNHASIVDGAMLSRAEVKRYRH-------- 150
Query: 435 AQVVMAFALLYYAIGWPGEIYVTTVLVGL---------------SYGAHWAIVPAAASEL 479
A V LL A +I VT + + +YGA + A AS +
Sbjct: 151 ADVEHLETLLKKAERHKRKIIVTDTIFSMDGDVAPLRELVVLKETYGAMLVVDEAHASGI 210
Query: 480 FGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQE 539
+G K G + L LA + + A G Y Y + ++ + M P F
Sbjct: 211 YGEKGQGMAHE-LQLAQHIDVHMGTFSKALGAYGAYVAGKRVVIDYFINTMRPFIFTTAL 269
Query: 540 TPTCLGSICYSI 551
P+ LG+IC +I
Sbjct: 270 PPSVLGTICTAI 281
>sp|Q07376|MCH1_YEAST Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MCH1 PE=1 SV=1
Length = 486
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 457 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 516
T LVG+ YG + + P ++G +SFG +Y L +A GS+IF + A YD
Sbjct: 383 TGSLVGIVYGGLFTVYPTLVLLVWGERSFGTVYGSLLIAPAIGSMIFCMLYAK-FYDSRC 441
Query: 517 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSI 547
G D P+C+ ++
Sbjct: 442 MSGGG---------------DLRNPSCISAV 457
>sp|A1XGT6|NU1C_RANMC NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
OS=Ranunculus macranthus GN=ndhA PE=3 SV=1
Length = 363
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 94 YGLVWLIVTNRLPSLPLWVLCIAIFVGTNGETYFNTAALVSCVQNF-PKSRGPVVGILKG 152
YGLVWL++ P+++L + I +G + Q P+ GP+ GIL+
Sbjct: 24 YGLVWLLI-------PIFILVLGIVIGVLVIVWLERQISAGVQQRIGPEYAGPL-GILQA 75
Query: 153 FAGLSGAILTQIYIMISANETSLIFLVAVGPSIVVMAFM--FIVRPIGGH 200
A + + + + + I+L ++GPSI V+A + ++V P G H
Sbjct: 76 LADGTKLLFKEDLLPSRGD----IYLFSIGPSIAVIAILLSYLVIPFGYH 121
>sp|Q8RA32|DPO3_THETN DNA polymerase III PolC-type OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=polC PE=3 SV=1
Length = 1401
Score = 33.5 bits (75), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 422 RKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVT 457
+K Y P A AVA V+MAF + Y+ + +P Y T
Sbjct: 1222 QKIKYMFPKAHAVAYVIMAFRIAYFKVYYPEAFYAT 1257
>sp|Q6MJY0|ADEC_BDEBA Adenine deaminase OS=Bdellovibrio bacteriovorus (strain ATCC 15356
/ DSM 50701 / NCIB 9529 / HD100) GN=ade PE=3 SV=1
Length = 586
Score = 33.1 bits (74), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 101 VTNRLPSLPLWVLCIAIFVGTNGETYFNTAAL-VSCVQNFPKSRGPVVGILKGFAGLSGA 159
V N + +P ++ + V +G+ + + L ++ ++ + K P +G++KG SGA
Sbjct: 405 VYNVIEIVPHEIITQHLTVAFDGQKFAESDVLYMANIERYGKGLPPALGLVKGMGLKSGA 464
Query: 160 ILTQIYIMISANETSLIFLVAVGPSIVVMAFMFIVRPIGG 199
+ + + A+++ I ++ P+ +V+A +++ GG
Sbjct: 465 LASSV-----AHDSHNIMVIGTNPADMVLAVNTLIKSGGG 499
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,089,514
Number of Sequences: 539616
Number of extensions: 9218570
Number of successful extensions: 31930
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 31891
Number of HSP's gapped (non-prelim): 58
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)