Query 007766
Match_columns 590
No_of_seqs 136 out of 628
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 09:58:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007766.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007766hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 99.9 7.4E-25 5.4E-29 228.5 14.9 418 9-583 17-443 (447)
2 d1pv7a_ f.38.1.2 (A:) Lactose 99.8 6.9E-18 5E-22 170.3 19.0 141 398-577 264-406 (417)
3 d1pw4a_ f.38.1.1 (A:) Glycerol 98.9 1.5E-09 1.1E-13 111.3 9.3 171 363-571 24-204 (447)
4 d1pv7a_ f.38.1.2 (A:) Lactose 98.3 4.5E-07 3.3E-11 89.6 8.1 153 355-514 2-164 (417)
5 d1v54i_ f.23.3.1 (I:) Mitochon 29.1 35 0.0025 25.2 4.6 33 554-586 22-55 (73)
6 d2e74f1 f.23.25.1 (F:1-32) Pet 22.8 22 0.0016 21.5 1.9 16 488-503 12-27 (32)
7 d1otsa_ f.20.1.1 (A:) Clc chlo 6.7 6.6E+02 0.048 23.4 9.0 65 447-515 333-398 (444)
8 d1e3oc2 a.35.1.1 (C:1-75) Oct- 6.4 1.3E+02 0.0096 22.0 2.3 18 38-55 12-32 (75)
9 d1au7a2 a.35.1.1 (A:5-76) Pit- 5.0 2E+02 0.015 20.8 2.7 18 38-55 8-28 (72)
10 d1n1ua_ g.3.3.1 (A:) Kalata B1 4.4 1.3E+02 0.0092 17.7 0.9 10 541-550 3-12 (29)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=7.4e-25 Score=228.50 Aligned_cols=418 Identities=13% Similarity=0.143 Sum_probs=259.8
Q ss_pred hhcccchHHHHHHHHHHHHhcC-cccccccccHHHHHHhCCChhhHHHHHHHHHHhhh-ccCccceeeeccchHHHHHHH
Q 007766 9 KSFVNNRWLVFVCSMWIQSCAG-IGYLFGSISPVIKAHMGYNQRQVSLLGVAKDLGDS-IGFVPGTFVEILPVWSINLIG 86 (590)
Q Consensus 9 ~~~~~~RW~~l~as~~i~l~~G-t~Y~fSvys~~Lk~~l~~sq~~~~~is~a~~~G~~-~gi~~G~~~D~~gpr~~~~iG 86 (590)
++..+.||.+++...+...... ....+++..|.++ ++|+|.+|++++..+..++.. ..+++|.+.||+|+|.++.+|
T Consensus 17 ~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~ 95 (447)
T d1pw4a_ 17 PTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAG 95 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence 4445568988877665544433 3356787778776 589999999998777777765 479999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHhhcCccccchhhHHHHHHhCCC-CCCchhhhhHhhhhhhHHHHHHHH
Q 007766 87 VLQNFVGYGLVWLIVTNRLPSLPLWVLCIAIFVGTNGETYFNTAALVSCVQNFPK-SRGPVVGILKGFAGLSGAILTQIY 165 (590)
Q Consensus 87 ~~l~~~GY~~~~l~~~g~i~s~~~~~l~~~~~l~G~g~~~~~taal~t~~knFP~-~RG~a~Gi~~a~~GLSa~i~s~i~ 165 (590)
.++..++..+..++.... .+++.+.+..++.|.+.+..+.++.....++||+ +||.+.|+...+.++++.+-..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 172 (447)
T d1pw4a_ 96 LILAAAVMLFMGFVPWAT---SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF 172 (447)
T ss_dssp HHHHHHHHHHHHHCHHHH---SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHhhccccchhh---hhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhh
Confidence 999888876644321111 1234566677788888888888899999999975 599999999999888876665443
Q ss_pred HHhcCChhhHHHHHHHhhHHHHHhhheeeeeccCCccccCCCCcchhhhHHHHHHHHHHHHHHHHhhhcccchhhHHHHH
Q 007766 166 IMISANETSLIFLVAVGPSIVVMAFMFIVRPIGGHRQVRLSDNTSFLFTYTVCLILAAYMLAVLLLEDLEVANQNVLTVL 245 (590)
Q Consensus 166 ~~~~~~~~~fllfla~~~~~v~l~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 245 (590)
... . . ...+.+..+.. .+..
T Consensus 173 ~~~-----------------~---------------~--~~~~w~~~~~~-----~~~~--------------------- 192 (447)
T d1pw4a_ 173 LLG-----------------M---------------A--WFNDWHAALYM-----PAFC--------------------- 192 (447)
T ss_dssp HHH-----------------H---------------H--HTCCSTTCTHH-----HHHH---------------------
T ss_pred hhH-----------------h---------------h--hhhcccccchh-----hhhh---------------------
Confidence 221 0 0 00011111100 0000
Q ss_pred HHHHHHHHHhccccceecccccCCCCCCccccccccccCcCCCccchhhhhhhccccCCCCCCCCCCchhhHHHHHHHHH
Q 007766 246 AVGLIIIILLPVTIPVVLVFFTEPPPPVEETLLAETNKGEASKSEDYQEEVILSEVEDEKPPEVDSLPASERQKRIAHLQ 325 (590)
Q Consensus 246 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (590)
..+..++++. ..+++++....+ +. ++ .+++.+++ .++..
T Consensus 193 ~~~~~~~~~~---------~~~~~~~~~~~~--~~---~~---------------~~~~~~~~---------~~~~~--- 231 (447)
T d1pw4a_ 193 AILVALFAFA---------MMRDTPQSCGLP--PI---EE---------------YKNDYPDD---------YNEKA--- 231 (447)
T ss_dssp HHHHHHHHHH---------HCCCSSTTTCCC--SC---TT---------------TCCC---------------------
T ss_pred HHHHHHHHHH---------hcccchhhcccc--hh---hh---------------hhhhcccc---------hhhcc---
Confidence 0000000000 001111100000 00 00 00000000 00000
Q ss_pred HHHHHHhhhhhhhhcccCCCCCCCCCCHHHhhhcHHHHHHHHHHHhhhcccceeecchHHHHHH-hcCCcc--cchhHHH
Q 007766 326 AKLFQAAAEGAVRVKRRKGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT--SIYVSMI 402 (590)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~p~~~~d~t~~~~l~~~~Fwll~~~~~~~~g~Glm~i~n~~~I~~s-~g~~~~--~~~Vsl~ 402 (590)
++ +....+...++.++++.+|.+....++.......+........++ .+.+.. ....++.
T Consensus 232 --------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (447)
T d1pw4a_ 232 --------------EQ---ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLY 294 (447)
T ss_dssp ---------------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHH
T ss_pred --------------cc---ccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcc
Confidence 00 001112345678999999999888777665544444434333333 344333 2478889
Q ss_pred HhhhhhccccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHHhc---CchhHHHHHHHHHhhhhccchhhHHHHHHh
Q 007766 403 SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASEL 479 (590)
Q Consensus 403 si~N~~GRl~~G~lSD~l~r~~~~~R~~~l~~~~~l~~~~~l~~~~~---~~~~l~~~~~liG~~yG~~~~l~P~i~ad~ 479 (590)
.+.+..|++++|+++||++|++.. ........+..++.++.... ......+..+++|++.++...+....+.|.
T Consensus 295 ~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 371 (447)
T d1pw4a_ 295 EYAGIPGTLLCGWMSDKVFRGNRG---ATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL 371 (447)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCHH---HHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccccc---cccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999886532 22222222222222222221 234567777888999999999999999999
Q ss_pred hcccchhhhhhHHHhhhhhHHHHhhHhHHHHHHhhhhhhhhhhhhhccCCCCCCccCCCCCCcccCCcccHHHHHHHHHH
Q 007766 480 FGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGL 559 (590)
Q Consensus 480 FG~k~~g~nyG~~~~a~~~g~~i~~~~l~g~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~F~i~~~~ 559 (590)
+..++.|+-.|+..+...+++.+.+|.+.|.+.|..+ |+..|.+.+++
T Consensus 372 ~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g--------------------------------~~~~~~~~~~~ 419 (447)
T d1pw4a_ 372 APKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG--------------------------------WDGGFMVMIGG 419 (447)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC--------------------------------SHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------------------------hHHHHHHHHHH
Confidence 9999999999998766555544557889999999766 78889999999
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHh
Q 007766 560 CIIAMVMSLIVVHRTKSVYAQLYG 583 (590)
Q Consensus 560 ~~~a~vls~~l~~r~r~~~~~~~~ 583 (590)
++++.++.+++..++||..+++.+
T Consensus 420 ~~~~~~~~~~~~~~~~~r~~~~~~ 443 (447)
T d1pw4a_ 420 SILAVILLIVVMIGEKRRHEQLLQ 443 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhccccHHHHHH
Confidence 999988888777666665554444
No 2
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.76 E-value=6.9e-18 Score=170.29 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=114.6
Q ss_pred hhHHHHhhhhhccccccchhhhhhhccCCchhHHHHHHHHHHHHHHHHHHhc-CchhHHHHHHHHHhhhhccchhhHHHH
Q 007766 398 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAA 476 (590)
Q Consensus 398 ~Vsl~si~N~~GRl~~G~lSD~l~r~~~~~R~~~l~~~~~l~~~~~l~~~~~-~~~~l~~~~~liG~~yG~~~~l~P~i~ 476 (590)
..++..+....++...|.++||.+|++. +.+..+++.++.+.+... ....+++..++.|+++|..+....+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 337 (417)
T d1pv7a_ 264 VTTMGELLNASIMFFAPLIINRIGGKNA------LLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYI 337 (417)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHCHHHH------HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccc------hhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5667778888999999999999987552 345555555555554443 345778888899999999999999999
Q ss_pred HHhhcccchhhhhhHH-HhhhhhHHHHhhHhHHHHHHhhhhhhhhhhhhhccCCCCCCccCCCCCCcccCCcccHHHHHH
Q 007766 477 SELFGLKSFGALYNFL-TLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGI 555 (590)
Q Consensus 477 ad~FG~k~~g~nyG~~-~~a~~~g~~i~~~~l~g~iyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~F~i 555 (590)
.|.+..++-|+.+|+. .++..+|..+ +|.++|.++|..+ |+.+|.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~g~~i-~~~~~G~l~~~~g--------------------------------~~~~~~~ 384 (417)
T d1pv7a_ 338 TSQFEVRFSATIYLVCFCFFKQLAMIF-MSVLAGNMYESIG--------------------------------FQGAYLV 384 (417)
T ss_dssp HHHSCGGGHHHHHHHHHTTTHHHHHHH-HHHHHHHHHHHHC--------------------------------HHHHHHH
T ss_pred HHHCCHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC--------------------------------HHHHHHH
Confidence 9999999999999985 5677888876 6889999999876 8889999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHH
Q 007766 556 MAGLCIIAMVMSLIVVHRTKSV 577 (590)
Q Consensus 556 ~~~~~~~a~vls~~l~~r~r~~ 577 (590)
.+++++++.++++++.+++|+.
T Consensus 385 ~~~~~~~~~~~~~~~l~~~~~~ 406 (417)
T d1pv7a_ 385 LGLVALGFTLISVFTLSGPGPL 406 (417)
T ss_dssp HHHHHHHHHHHHHHHSCCSSCT
T ss_pred HHHHHHHHHHHHHHhhcCCCcc
Confidence 9999999999998888776653
No 3
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=98.88 E-value=1.5e-09 Score=111.26 Aligned_cols=171 Identities=13% Similarity=0.136 Sum_probs=122.4
Q ss_pred HHHHHHHHhhhcccce---eecchHHHHHHhcCCccc--chhHHHHhhhhhccccccchhhhhhhccCCchhHHHHHHHH
Q 007766 363 LLLFFSLVLASGSGLT---VIDNLGQICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 437 (590)
Q Consensus 363 wll~~~~~~~~g~Glm---~i~n~~~I~~s~g~~~~~--~~Vsl~si~N~~GRl~~G~lSD~l~r~~~~~R~~~l~~~~~ 437 (590)
|.+++..+++.....+ .++.+.+..++.|.+..+ ...+++.+...+|.+.+|+++||+|||+.+ .+..+
T Consensus 24 w~i~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~------~~~~~ 97 (447)
T d1pw4a_ 24 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL------PAGLI 97 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH------HHHHH
Confidence 4444444443332222 233444555567777665 478999999999999999999999997733 44444
Q ss_pred HHHHHHHHHHh-----cCchhHHHHHHHHHhhhhccchhhHHHHHHhhcccchhhhhhHHHhhhhhHHHHhhHhHHHHHH
Q 007766 438 VMAFALLYYAI-----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 512 (590)
Q Consensus 438 l~~~~~l~~~~-----~~~~~l~~~~~liG~~yG~~~~l~P~i~ad~FG~k~~g~nyG~~~~a~~~g~~i~~~~l~g~iy 512 (590)
+..++.++... .....+++.-.+.|++.|..+...+++++|.|..|+-|+..|+...+..+|..+ ++.+.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~~~~~~~ 176 (447)
T d1pw4a_ 98 LAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGI-PPLLFLLGM 176 (447)
T ss_dssp HHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTS-HHHHHHHHH
T ss_pred HHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhh-hhhhhhhHh
Confidence 44444443322 234578888899999999999999999999999999999999999999999876 676777666
Q ss_pred hhhhhhhhhhhhhccCCCCCCccCCCCCCcccCCcccHHHHHHHHHHHHHHHHHHHHhh
Q 007766 513 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 571 (590)
Q Consensus 513 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~G~~Cy~~~F~i~~~~~~~a~vls~~l~ 571 (590)
+... -++..|.+.+.++++..++.+.+.
T Consensus 177 ~~~~-------------------------------~w~~~~~~~~~~~~~~~~~~~~~~ 204 (447)
T d1pw4a_ 177 AWFN-------------------------------DWHAALYMPAFCAILVALFAFAMM 204 (447)
T ss_dssp HHTC-------------------------------CSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred hhhh-------------------------------cccccchhhhhhHHHHHHHHHHhc
Confidence 5443 166677887777776666655543
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=98.30 E-value=4.5e-07 Score=89.64 Aligned_cols=153 Identities=11% Similarity=0.038 Sum_probs=86.2
Q ss_pred HhhhcHHHHHHHHHHHhhhcccceeecchHH-HHHHhcCCccc--chhHHHHhhhhhccccccchhhhhhhccCCchhHH
Q 007766 355 QALMKADFLLLFFSLVLASGSGLTVIDNLGQ-ICQSLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 431 (590)
Q Consensus 355 ~~l~~~~Fwll~~~~~~~~g~Glm~i~n~~~-I~~s~g~~~~~--~~Vsl~si~N~~GRl~~G~lSD~l~r~~~~~R~~~ 431 (590)
+-+||++||++.+.+++....--++..-+.. +.+..|.++.+ ...++..+...++.+.+|+++||+|||+.+
T Consensus 2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l----- 76 (417)
T d1pv7a_ 2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL----- 76 (417)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHH-----
T ss_pred CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 3589999999988766543332233333443 33457877665 478899999999999999999999997743
Q ss_pred HHHHHHHHHHHHHHHHhcC-----chhHHHHHHHHHhhhhccchhhHHHHHHhhcc--cchhhhhhHHHhhhhhHHHHhh
Q 007766 432 MAVAQVVMAFALLYYAIGW-----PGEIYVTTVLVGLSYGAHWAIVPAAASELFGL--KSFGALYNFLTLASPAGSLIFS 504 (590)
Q Consensus 432 l~~~~~l~~~~~l~~~~~~-----~~~l~~~~~liG~~yG~~~~l~P~i~ad~FG~--k~~g~nyG~~~~a~~~g~~i~~ 504 (590)
.+......++...+.... .....+...+.+...+...........+..-. +.....++........+..+ +
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 154 (417)
T d1pv7a_ 77 -LWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWAL-G 154 (417)
T ss_dssp -HHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH-H
T ss_pred -HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHHHHHHhhhhcccccc-c
Confidence 222333333322222111 12234444444444444444433333332222 22233445555555555554 5
Q ss_pred HhHHHHHHhh
Q 007766 505 GVIASGIYDY 514 (590)
Q Consensus 505 ~~l~g~iyd~ 514 (590)
+.+.+.+++.
T Consensus 155 ~~~~~~l~~~ 164 (417)
T d1pv7a_ 155 ASIVGIMFTI 164 (417)
T ss_dssp HHHHHHHHHH
T ss_pred cccccccccc
Confidence 7677777664
No 5
>d1v54i_ f.23.3.1 (I:) Mitochondrial cytochrome c oxidase subunit VIc {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.07 E-value=35 Score=25.21 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHH-HHhhhhhhHHHHHHHhhhc
Q 007766 554 GIMAGLCIIAMVMS-LIVVHRTKSVYAQLYGNLN 586 (590)
Q Consensus 554 ~i~~~~~~~a~vls-~~l~~r~r~~~~~~~~~~~ 586 (590)
.+..++|+.+.++- +.+...+|+.|+++||++-
T Consensus 22 ~~a~~lsl~~a~~~Kf~v~eprKkaYadFYknYD 55 (73)
T d1v54i_ 22 VGAFMVSLGFATFYKFAVAEKRKKAYADFYRNYD 55 (73)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHhccHhHHHHHHHHHccc
Confidence 33444444444333 3455667789999999874
No 6
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=22.76 E-value=22 Score=21.52 Aligned_cols=16 Identities=13% Similarity=0.347 Sum_probs=13.3
Q ss_pred hhhHHHhhhhhHHHHh
Q 007766 488 LYNFLTLASPAGSLIF 503 (590)
Q Consensus 488 nyG~~~~a~~~g~~i~ 503 (590)
.||+++.+|++|..++
T Consensus 12 sfglifvgwglgalll 27 (32)
T d2e74f1 12 SFGLIFVGWGLGVLLL 27 (32)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhHHHHHHh
Confidence 3789999999998764
No 7
>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}
Probab=6.69 E-value=6.6e+02 Score=23.39 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=38.5
Q ss_pred HhcCchhHHHHHHHHHhhhhccchhhHHHHHHhhcc-cchhhhhhHHHhhhhhHHHHhhHhHHHHHHhhh
Q 007766 447 AIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 515 (590)
Q Consensus 447 ~~~~~~~l~~~~~liG~~yG~~~~l~P~i~ad~FG~-k~~g~nyG~~~~a~~~g~~i~~~~l~g~iyd~~ 515 (590)
..+.++..+..+..+|-+.|..++..- .+.+.. ...-..|-++.++..+++.. ..++.+.+--.+
T Consensus 333 ~~G~~GG~f~P~l~iGa~~G~~~~~~~---~~~~~~~~~~~~~~alvGmaa~~a~~~-~~Plta~vl~~E 398 (444)
T d1otsa_ 333 SSGAPGGIFAPMLALGTVLGTAFGMVA---VELFPQYHLEAGTFAIAGMGALLAASI-RAPLTGIILVLE 398 (444)
T ss_dssp HTTCSSBSHHHHHHHHHHHHHHHHHHH---HHHCGGGTCCHHHHHHHHHTHHHHHTS-CCHHHHHHHHHH
T ss_pred hcCCCCCeehHHHHHHHHHHHHHHHHH---HHhCCcccCCHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 345578899999999999998776543 222221 22234566666666666654 333555554433
No 8
>d1e3oc2 a.35.1.1 (C:1-75) Oct-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.39 E-value=1.3e+02 Score=22.03 Aligned_cols=18 Identities=28% Similarity=0.584 Sum_probs=13.4
Q ss_pred ccHHHHH---HhCCChhhHHH
Q 007766 38 ISPVIKA---HMGYNQRQVSL 55 (590)
Q Consensus 38 ys~~Lk~---~l~~sq~~~~~ 55 (590)
|+..+|+ ++|++|+|+..
T Consensus 12 Fa~~fk~rRi~LG~TQ~dVG~ 32 (75)
T d1e3oc2 12 FAKTFKQRRIKLGFTQGDVGL 32 (75)
T ss_dssp HHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHhccccHHHHHH
Confidence 4455555 59999999887
No 9
>d1au7a2 a.35.1.1 (A:5-76) Pit-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=5.05 E-value=2e+02 Score=20.78 Aligned_cols=18 Identities=28% Similarity=0.484 Sum_probs=13.2
Q ss_pred ccHHHHH---HhCCChhhHHH
Q 007766 38 ISPVIKA---HMGYNQRQVSL 55 (590)
Q Consensus 38 ys~~Lk~---~l~~sq~~~~~ 55 (590)
|+..+|+ ++|++|.|+..
T Consensus 8 Fa~~fk~rRi~LG~TQ~dVG~ 28 (72)
T d1au7a2 8 FANEFKVRRIKLGYTQTNVGE 28 (72)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHhccCccHHHHHH
Confidence 4455555 59999998877
No 10
>d1n1ua_ g.3.3.1 (A:) Kalata B1 {African plant (Oldenlandia affinis) [TaxId: 60225]}
Probab=4.45 E-value=1.3e+02 Score=17.74 Aligned_cols=10 Identities=40% Similarity=1.109 Sum_probs=7.5
Q ss_pred CcccCCcccH
Q 007766 541 PTCLGSICYS 550 (590)
Q Consensus 541 ~~C~G~~Cy~ 550 (590)
.+|.|..||.
T Consensus 3 etc~ggtc~t 12 (29)
T d1n1ua_ 3 ETCVGGTCNT 12 (29)
T ss_dssp CBCTTSCCSS
T ss_pred ceeeCCeecC
Confidence 5788888875
Done!