BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007769
MEAMNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCLATLFLAALTSFGSFDFNGISF
SMGASSASSPWNSSSDAINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGA
LLTESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGL
LDMYPASTAKEQLGSPRHRPISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDP
NVRFLVADWERLPGFGIGAQIAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWS
CYFLPETSQECRDRAFELMDNKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPT
TEINGTLIAYHRKMDRRWWRAQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLP
REWPNVEVANNSGSDIEDFVWSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADR
IRKHFPHLNSIWLSTEMQEVVDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTN
YPLVNFLMATDSDFFIGALGSTWCFLIDGMRNTGGKVMSGYLSVNKDRFW

High Scoring Gene Products

Symbol, full name Information P value
AT5G28910 protein from Arabidopsis thaliana 6.7e-197
AT5G28960 protein from Arabidopsis thaliana 1.7e-187

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007769
        (590 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2148715 - symbol:AT5G28910 "AT5G28910" species...  1580  6.7e-197  2
TAIR|locus:2148695 - symbol:AT5G28960 "AT5G28960" species...  1523  1.7e-187  2


>TAIR|locus:2148715 [details] [associations]
            symbol:AT5G28910 "AT5G28910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:BT014898
            IPI:IPI00656547 RefSeq:NP_001031963.1 UniGene:At.30712
            ProteinModelPortal:Q6ICX5 EnsemblPlants:AT5G28910.2 GeneID:833014
            KEGG:ath:AT5G28910 TAIR:At5g28910 eggNOG:NOG322139
            HOGENOM:HOG000083093 OMA:QTEYTCG PhylomeDB:Q6ICX5
            ProtClustDB:CLSN2681072 Genevestigator:Q6ICX5 Uniprot:Q6ICX5
        Length = 535

 Score = 1580 (561.2 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
 Identities = 282/384 (73%), Positives = 327/384 (85%)

Query:   207 PPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQIAGMCG 266
             PPWI+G DEENYPLTR+VQRDIW+HQHP +C + +++FLVADWE LPGFGIGAQIAGM G
Sbjct:   156 PPWISGGDEENYPLTRRVQRDIWIHQHPLDCGNKSLKFLVADWETLPGFGIGAQIAGMTG 215

Query:   267 LLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMDNKEALE 326
             LLAIAINE RVLV NYYNRADHDGCKGS R +WSCYFL ETS+ECR RAF ++  +EA E
Sbjct:   216 LLAIAINENRVLVANYYNRADHDGCKGSFRGNWSCYFLQETSEECRKRAFAIVKKREAWE 275

Query:   327 KGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWRAQAVRY 386
              GI+T K NYS+K+IWAG  P+ WG PWSY++PTTEING+LI+ HRKMDRRWWRAQAVRY
Sbjct:   276 SGIVTGKQNYSTKEIWAGAIPKQWGKPWSYMKPTTEINGSLISNHRKMDRRWWRAQAVRY 335

Query:   387 LMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFVWSSHRP 446
             LMR+ TEYTCGL+N+AR++AFGKEAAK+VL+    +W          ++IE+ VWS H+P
Sbjct:   336 LMRYQTEYTCGLMNIARNSAFGKEAAKIVLSA--GDWRKKN--KKMRTEIEEQVWSDHKP 391

Query:   447 WIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEVVDKSKL 506
             W+PRPMLS+HVRMGDKACEM+V   E+YM LADRIR  FP LN IWLSTEM+EVVD+SK 
Sbjct:   392 WLPRPMLSVHVRMGDKACEMRVAALEEYMHLADRIRDRFPELNRIWLSTEMKEVVDRSKD 451

Query:   507 YPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALGSTWCFL 566
             Y HW FY+T V RQVGN +MA YEASLGRE STNYPLVNFLMA+++DFF+GALGSTWCFL
Sbjct:   452 YAHWRFYYTEVARQVGNKSMAEYEASLGREMSTNYPLVNFLMASEADFFVGALGSTWCFL 511

Query:   567 IDGMRNTGGKVMSGYLSVNKDRFW 590
             IDGMRNTGGKVMSGYLSVNKDRFW
Sbjct:   512 IDGMRNTGGKVMSGYLSVNKDRFW 535

 Score = 349 (127.9 bits), Expect = 6.7e-197, Sum P(2) = 6.7e-197
 Identities = 81/182 (44%), Positives = 103/182 (56%)

Query:     4 MNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCXXXXXXXXXXSFGSFDFNGIXXXXX 63
             M+ KSLERVVS+RAL++G+SFPCQICVVGFLCG+C          S G+F+F        
Sbjct:     1 MSMKSLERVVSERALKLGNSFPCQICVVGFLCGICLTSLFLAALTSLGTFEFAAFSFTSS 60

Query:    64 XXXXXXXXXXXXXXINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLT 123
                           INMV S D KLK      W N  +  +E ++E V LL   W  LL 
Sbjct:    61 SSVFPPCNSSTSHIINMVASIDRKLK------WKN--KVEIEEEDE-VKLLVSAWDNLL- 110

Query:   124 ESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPWTNRKGLLDM 183
               ++EE +FL K G+N+S VPN PHLENC+  A +  RLDTR  N + PPW +  G  + 
Sbjct:   111 --LNEE-DFLKKVGINKSDVPNGPHLENCEEKARVRERLDTRLANWTLPPWISG-GDEEN 166

Query:   184 YP 185
             YP
Sbjct:   167 YP 168


>TAIR|locus:2148695 [details] [associations]
            symbol:AT5G28960 "AT5G28960" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688 IPI:IPI00523247
            RefSeq:NP_198248.2 UniGene:At.55092 ProteinModelPortal:F4KBG5
            PRIDE:F4KBG5 EnsemblPlants:AT5G28960.1 GeneID:833022
            KEGG:ath:AT5G28960 OMA:CKLSERT PhylomeDB:F4KBG5 Uniprot:F4KBG5
        Length = 536

 Score = 1523 (541.2 bits), Expect = 1.7e-187, Sum P(2) = 1.7e-187
 Identities = 275/390 (70%), Positives = 321/390 (82%)

Query:   201 ISEGVYPPWITGSDEENYPLTRKVQRDIWVHQHPPNCWDPNVRFLVADWERLPGFGIGAQ 260
             I+   +P WITG DE+NYPLTR VQ +IW+HQHP +C +  V+FLV DWE LP +G GAQ
Sbjct:   150 IANQSFPTWITGGDEQNYPLTRIVQSEIWIHQHPLDCENETVKFLVVDWETLPIYGSGAQ 209

Query:   261 IAGMCGLLAIAINEKRVLVTNYYNRADHDGCKGSSRSSWSCYFLPETSQECRDRAFELMD 320
             I  M GLLAIAINE RVLV N+YNRADHDGC+GSSR  WSCYFLPETS+ECR RAF ++ 
Sbjct:   210 ITEMTGLLAIAINENRVLVANHYNRADHDGCRGSSRGRWSCYFLPETSEECRKRAFAVVR 269

Query:   321 NKEALEKGIITTKDNYSSKQIWAGRAPRVWGDPWSYLQPTTEINGTLIAYHRKMDRRWWR 380
              KEA E G +T K NYSSK IWAG  P++WG PWSY++PTTEING+LI+ HRKMDRRWWR
Sbjct:   270 EKEAWESGTVTGKQNYSSKVIWAGPIPKLWGKPWSYMKPTTEINGSLISKHRKMDRRWWR 329

Query:   381 AQAVRYLMRFLTEYTCGLLNVARHAAFGKEAAKMVLTGLPREWPNVEVANNSGSDIEDFV 440
             AQAVRYLMRF T YTCGL+N AR+ AFGKEAA++VL+    +W   +      ++IE+ V
Sbjct:   330 AQAVRYLMRFQTAYTCGLMNAARNTAFGKEAAEIVLSA--GDWRKNK-KKKVKTEIEEQV 386

Query:   441 WSSHRPWIPRPMLSMHVRMGDKACEMKVVEFEKYMLLADRIRKHFPHLNSIWLSTEMQEV 500
             WS+H+PW+PRPMLS+HVRMGDKACEM+V   E+YM LADRI+  FP LN IWLSTEM+EV
Sbjct:   387 WSNHKPWVPRPMLSVHVRMGDKACEMRVAALEEYMHLADRIKDRFPELNKIWLSTEMKEV 446

Query:   501 VDKSKLYPHWNFYFTNVTRQVGNMTMAIYEASLGRETSTNYPLVNFLMATDSDFFIGALG 560
             VDKSK Y HW FY+T V RQVGN ++A YEASLGRETSTNYPLVNFLMA+++DFF+GALG
Sbjct:   447 VDKSKDYDHWRFYYTEVARQVGNKSIAEYEASLGRETSTNYPLVNFLMASEADFFVGALG 506

Query:   561 STWCFLIDGMRNTGGKVMSGYLSVNKDRFW 590
             STWCFLIDGMRNTGGKVMSGYLSVNKDRFW
Sbjct:   507 STWCFLIDGMRNTGGKVMSGYLSVNKDRFW 536

 Score = 317 (116.6 bits), Expect = 1.7e-187, Sum P(2) = 1.7e-187
 Identities = 68/171 (39%), Positives = 95/171 (55%)

Query:     4 MNQKSLERVVSQRALQMGSSFPCQICVVGFLCGVCXXXXXXXXXXSFGSFDFNGIXXXXX 63
             M+ KSL R+VS++AL++G+SFPCQICVVG LCG+C          S G+F+         
Sbjct:     1 MSMKSLNRMVSEKALKLGNSFPCQICVVGILCGICFTSLFLAALTSLGTFELAAFSLSAS 60

Query:    64 XXXXXXXXXXXXXXINMVKSTDCKLKLKETERWFNSQRSTMETDNERVSLLHLVWGALLT 123
                           I+MV S D KLK      W N  ++    ++++V LL   W  L+ 
Sbjct:    61 SSAFLPYNSTSHI-IHMVSSMDRKLK------WTN--KAEKGDNDDQVKLLVSAWDNLVL 111

Query:   124 ESVHEEREFLLKFGLNQSSVPNAPHLENCKLSAYINMRLDTRAENESFPPW 174
              +     +FL K G+N+S VPNAPHLENC++ + +  RLDTR  N+SFP W
Sbjct:   112 NN----EDFLKKLGMNKSDVPNAPHLENCEVISRVRERLDTRIANQSFPTW 158


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.135   0.436    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      590       561   0.00099  119 3  11 22  0.37    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  636 (68 KB)
  Total size of DFA:  381 KB (2185 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.02u 0.16s 42.18t   Elapsed:  00:00:02
  Total cpu time:  42.02u 0.16s 42.18t   Elapsed:  00:00:02
  Start:  Mon May 20 17:19:40 2013   End:  Mon May 20 17:19:42 2013

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