BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007770
         (590 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224130112|ref|XP_002320755.1| predicted protein [Populus trichocarpa]
 gi|222861528|gb|EEE99070.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/590 (82%), Positives = 524/590 (88%), Gaps = 28/590 (4%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFLEN   TS GGGGARIVADI Y      NNNNMPT   +  PRL+S +   ++K
Sbjct: 1   MSFGGFLEN---TSPGGGGARIVADIPY------NNNNMPTGA-IVQPRLVSPS---ITK 47

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           SMFNSPGLSLALQQPNID QG     + RM E+FE  +GRRSRE+  EHESRSGSDNMDG
Sbjct: 48  SMFNSPGLSLALQQPNIDGQG----DITRMSENFETSVGRRSREE--EHESRSGSDNMDG 101

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           ASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELS+RLCLETRQVKF
Sbjct: 102 ASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKF 161

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP+C+NCGGPAIIGDISLEE
Sbjct: 162 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGDISLEE 221

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGLSS 297
           QHLRIENARLKDELDRVCALAGKFLGRP+SS+     PPMPNSSLELGVG+ NGF GL S
Sbjct: 222 QHLRIENARLKDELDRVCALAGKFLGRPISSLASSLGPPMPNSSLELGVGS-NGFAGL-S 279

Query: 298 TVTTTLP--ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMA 355
           TV TTLP   DF  GIS ALPV+     +  GVTG+ RS+ERSMFLELALAAMDELVKMA
Sbjct: 280 TVATTLPLGPDFVGGISGALPVLTQTRPATTGVTGIGRSLERSMFLELALAAMDELVKMA 339

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           QTDEPLWIRSF+G GR++LNHEEYLRT TPCIG+KP+GFV+EASRETGMVIINSLALVET
Sbjct: 340 QTDEPLWIRSFDG-GREILNHEEYLRTITPCIGMKPSGFVSEASRETGMVIINSLALVET 398

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           LMD NRWAEMFPC+IART+TTDVI++GMGGTRNG+LQLMHAELQVLSPLVPVREVNFLRF
Sbjct: 399 LMDSNRWAEMFPCVIARTSTTDVIANGMGGTRNGSLQLMHAELQVLSPLVPVREVNFLRF 458

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGA-PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
           CKQHAEGVWAVVDVS+DTIRETSGA P FVNCRRLPSGCVVQDMPNGYSKVTW+EHAEYD
Sbjct: 459 CKQHAEGVWAVVDVSVDTIRETSGASPTFVNCRRLPSGCVVQDMPNGYSKVTWIEHAEYD 518

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           ESQ HQLY+PLI SGMGFGAQRW+ATLQRQ ECLAILMS++V +RDHT I
Sbjct: 519 ESQTHQLYRPLISSGMGFGAQRWIATLQRQSECLAILMSSNVPSRDHTAI 568


>gi|255541474|ref|XP_002511801.1| homeobox protein, putative [Ricinus communis]
 gi|223548981|gb|EEF50470.1| homeobox protein, putative [Ricinus communis]
          Length = 825

 Score =  970 bits (2507), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/588 (83%), Positives = 521/588 (88%), Gaps = 21/588 (3%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFLEN    S GGGGARIVADI + NN ++++ NMPT   +A PRLLS +    +K
Sbjct: 1   MSFGGFLENG---SPGGGGARIVADIPFNNNSSSSSTNMPTGA-IAQPRLLSPS---FTK 53

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           SMFNSPGLSLALQQPNID QG     + RM E+FE I GRRSRE+  EHESRSGSDNMDG
Sbjct: 54  SMFNSPGLSLALQQPNIDGQGD---HVARMAENFETIGGRRSREE--EHESRSGSDNMDG 108

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           ASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELSKRLCLETRQVKF
Sbjct: 109 ASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKF 168

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMKTQLERHENSLLRQENDKLRAENM+IRDAMRNPIC+NCGGPAIIGDISLEE
Sbjct: 169 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMTIRDAMRNPICSNCGGPAIIGDISLEE 228

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGLSS 297
           QHLRIENARLKDELDRVCALAGKFLGRP+SS+     PPMPNSSLELGVG  NGF GLS 
Sbjct: 229 QHLRIENARLKDELDRVCALAGKFLGRPISSLASSIGPPMPNSSLELGVGN-NGFAGLS- 286

Query: 298 TVTTTLP--ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMA 355
           TV TTLP   DFG GIS  L VV        GVTGLDRS+ERSMFLELALAAMDELVKMA
Sbjct: 287 TVATTLPLGPDFGGGIST-LNVVTQTRPGNTGVTGLDRSLERSMFLELALAAMDELVKMA 345

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           QTD+PLWIRS EG GR++LNHEEY+RTFTPCIG+KP+GFV EASRE GMVIINSLALVET
Sbjct: 346 QTDDPLWIRSLEG-GREMLNHEEYVRTFTPCIGMKPSGFVFEASREAGMVIINSLALVET 404

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           LMD NRWAEMFPC+IART+TTDVISSGMGGTRNG+LQLMHAELQVLSPLVPVREVNFLRF
Sbjct: 405 LMDSNRWAEMFPCVIARTSTTDVISSGMGGTRNGSLQLMHAELQVLSPLVPVREVNFLRF 464

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           CKQHAEGVWAVVDVSIDTIRETSG PAF NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE
Sbjct: 465 CKQHAEGVWAVVDVSIDTIRETSGGPAFANCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 524

Query: 536 SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           S +HQLY+PLI SGMGFGAQRWVATLQRQCECLAILMS++V ARDHT 
Sbjct: 525 SPIHQLYRPLISSGMGFGAQRWVATLQRQCECLAILMSSTVPARDHTA 572


>gi|359489358|ref|XP_002272264.2| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Vitis
           vinifera]
          Length = 811

 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/588 (81%), Positives = 518/588 (88%), Gaps = 32/588 (5%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFL+N    SSGGGGARIVADI Y+NN          T  +A PRL+S +   L+K
Sbjct: 1   MSFGGFLDN----SSGGGGARIVADIPYSNN--------MATGAIAQPRLVSPS---LAK 45

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           SMF+SPGLSLALQ  +++ QG    ++ R+ E+FE   GRRSRED  EHESRSGSDNMDG
Sbjct: 46  SMFSSPGLSLALQT-SMEGQG----EVTRLAENFESGGGRRSRED--EHESRSGSDNMDG 98

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           ASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELS+RL LETRQVKF
Sbjct: 99  ASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLSLETRQVKF 158

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMKTQLERHENS+LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE
Sbjct: 159 WFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 218

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMG---PPPMPNSSLELGVGTINGFGGLSS 297
           QHLRIENARLKDELDRVCALAGKFLGRP+SS+     P MP+SSLELGVG+ NGFGGLS 
Sbjct: 219 QHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPSSSLELGVGS-NGFGGLS- 276

Query: 298 TVTTTLPA--DFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMA 355
           TV TTLP   DFG GIS+ LPV   P  S  GVTGL+RS+ERSMFLELALAAMDELVKMA
Sbjct: 277 TVATTLPLGHDFGGGISSTLPVA--PPTSTTGVTGLERSLERSMFLELALAAMDELVKMA 334

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           QTDEPLW+RS EG GR++LN EEY+RTFTPCIG+KP+GFVTE++RETGMVIINSLALVET
Sbjct: 335 QTDEPLWVRSLEG-GREILNLEEYMRTFTPCIGMKPSGFVTESTRETGMVIINSLALVET 393

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           LMD NRWAEMFPCMIART+TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF
Sbjct: 394 LMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 453

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           CKQHAEGVWAVVDVSIDTIRETS AP FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE
Sbjct: 454 CKQHAEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 513

Query: 536 SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           S VHQLY+PL+ SGMGFGAQRWVATLQRQCECLAILMS++V  RDHT 
Sbjct: 514 SAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHTA 561


>gi|302398853|gb|ADL36721.1| HD domain class transcription factor [Malus x domestica]
          Length = 824

 Score =  919 bits (2375), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/590 (78%), Positives = 516/590 (87%), Gaps = 29/590 (4%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFL+N+  +S   GGARIVADI YTN+    NNNMP++  +A P L++   Q L+K
Sbjct: 1   MSFGGFLDNSTGSS---GGARIVADIPYTNS----NNNMPSSA-IAQPHLVT---QSLTK 49

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIG-RRSREDLLEHESRSGSDNMD 119
           SMFNSPGLSLALQ  N+D QG     + R+ ES+E   G RRSRE+  EHESRSGSDNMD
Sbjct: 50  SMFNSPGLSLALQT-NVDGQG----DVTRVAESYEANNGGRRSREE--EHESRSGSDNMD 102

Query: 120 GASGDDLDAADNPPRKK-RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           GASGDD DAADN PRKK RYHRHTPQQIQELE+LFKECPHPDEKQRLELS+RL LETRQV
Sbjct: 103 GASGDDQDAADNNPRKKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLNLETRQV 162

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC+NCGGPAIIGDISL
Sbjct: 163 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGDISL 222

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGL 295
           +EQHLRIENARLKDELDRVCALAGKFLGRP+SS+     PP+P+S+LELGVG+ NGFGG+
Sbjct: 223 DEQHLRIENARLKDELDRVCALAGKFLGRPISSLATSMGPPLPSSTLELGVGS-NGFGGM 281

Query: 296 SSTVTT-TLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM 354
           S+  T+ ++  DFG GI +A+ +V   +   P VTGLDRSIERSMFLELALAAMDELVKM
Sbjct: 282 SNVATSISMGPDFGGGIGSAMSIV---SHGRPSVTGLDRSIERSMFLELALAAMDELVKM 338

Query: 355 AQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVE 414
           AQTDEPLW+RS EG GR+VLNHEEY+R+FTPCIGLKP+GFV+EASRE+GMVIINSL LVE
Sbjct: 339 AQTDEPLWLRSLEG-GREVLNHEEYMRSFTPCIGLKPSGFVSEASRESGMVIINSLTLVE 397

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
           TLMD NRW EMFP +IART+TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR
Sbjct: 398 TLMDSNRWLEMFPGVIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 457

Query: 475 FCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
           FCKQ AEGVWAVVDVS+D IR+TSGAP F+NCRRLPSGCVVQDMPNGYS+VTWVEHAEYD
Sbjct: 458 FCKQLAEGVWAVVDVSVDVIRDTSGAPTFMNCRRLPSGCVVQDMPNGYSRVTWVEHAEYD 517

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           ESQVHQLY+PL+ SGMGFGAQRWVATLQRQ E  AILMS+SV +RDHT I
Sbjct: 518 ESQVHQLYRPLLSSGMGFGAQRWVATLQRQSEFQAILMSSSVPSRDHTAI 567


>gi|147811086|emb|CAN61351.1| hypothetical protein VITISV_023503 [Vitis vinifera]
          Length = 784

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/547 (83%), Positives = 492/547 (89%), Gaps = 20/547 (3%)

Query: 42  TTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRR 101
           T  +A PRL+S +   L+KSMF+SPGLSLALQ  +++ QG    ++ R+ E+FE   GRR
Sbjct: 3   TGAIAQPRLVSPS---LAKSMFSSPGLSLALQT-SMEGQG----EVTRLAENFESGGGRR 54

Query: 102 SREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDE 161
           SRED  EHESRSGSDNMDGASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDE
Sbjct: 55  SRED--EHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDE 112

Query: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           KQRLELS+RL LETRQVKFWFQNRRTQMKTQLERHENS+LRQENDKLRAENMSIRDAMRN
Sbjct: 113 KQRLELSRRLSLETRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRN 172

Query: 222 PICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG---PPPMP 278
           PICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+     P MP
Sbjct: 173 PICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMP 232

Query: 279 NSSLELGVGTINGFGGLSSTVTTTLPA--DFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
           +SSLELGVG+ NGFGGLS TV TTLP   DFG GIS+ LPV   P  S  GVTGL+RS+E
Sbjct: 233 SSSLELGVGS-NGFGGLS-TVATTLPLGHDFGGGISSTLPVA--PPTSTTGVTGLERSLE 288

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVT 396
           RSMFLELALAAMDELVKMAQTDEPLW+RS EG GR++LN EEY+RTFTPCIG+KP+GFVT
Sbjct: 289 RSMFLELALAAMDELVKMAQTDEPLWVRSLEG-GREILNLEEYMRTFTPCIGMKPSGFVT 347

Query: 397 EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHA 456
           E++RETGMVIINSLALVETLMD NRWAEMFPCMIART+TTDVISSGMGGTRNGALQLMHA
Sbjct: 348 ESTRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHA 407

Query: 457 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQ 516
           ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS AP FVNCRRLPSGCVVQ
Sbjct: 408 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQ 467

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           DMPNGYSKVTWVEHAEYDES VHQLY+PL+ SGMGFGAQRWVATLQRQCECLAILMS++V
Sbjct: 468 DMPNGYSKVTWVEHAEYDESAVHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTV 527

Query: 577 SARDHTG 583
             RDHT 
Sbjct: 528 PTRDHTA 534


>gi|350539483|ref|NP_001234657.1| cutin deficient 2 [Solanum lycopersicum]
 gi|255529749|gb|ACU12849.1| cutin deficient 2 [Solanum lycopersicum]
          Length = 821

 Score =  914 bits (2362), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/595 (77%), Positives = 518/595 (87%), Gaps = 32/595 (5%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNN----MPTTTTLAHPRLLSSTPQ 56
           M+FGGFL+NN    SGGGGARIVADI + +N++++NN+    MPT   ++ PRLL   PQ
Sbjct: 1   MNFGGFLDNN----SGGGGARIVADIPFNHNNSSSNNDNKNNMPTGA-ISQPRLL---PQ 52

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEG--IIGRRSREDLLEHESRSG 114
            L+K+MFNSPGLSLALQ         G  ++ RM E++EG   +GRRSRE+  E +SRSG
Sbjct: 53  SLAKNMFNSPGLSLALQ-----TGMEGQSEVTRMAENYEGNNSVGRRSREE--EPDSRSG 105

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           SDN++GASGD+ DA D PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL LE
Sbjct: 106 SDNLEGASGDEQDATDKPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLSLE 165

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
           TRQVKFWFQNRRTQMKTQLERHENS+LRQENDKLRAENMSIR+AMRNPICTNCGGPA+IG
Sbjct: 166 TRQVKFWFQNRRTQMKTQLERHENSILRQENDKLRAENMSIREAMRNPICTNCGGPAMIG 225

Query: 235 DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM---GPPPMPNSSLELGVGTING 291
           +ISLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+    PPPMPNSSLELGVG+ NG
Sbjct: 226 EISLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLVTSMPPPMPNSSLELGVGS-NG 284

Query: 292 FGGLSSTVTTT--LPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMD 349
           FGG+S+  TT    P DFG GISN+LPVV P  R     TG++RS+ERSM+LELALAAM+
Sbjct: 285 FGGMSNVPTTLPLAPPDFGVGISNSLPVV-PSTRQS---TGIERSLERSMYLELALAAME 340

Query: 350 ELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINS 409
           ELVKMAQTDEPLW RS EG GR++LNHEEY+RTFTPCIG++PN F++EASRETGMVIINS
Sbjct: 341 ELVKMAQTDEPLWFRSIEG-GREILNHEEYIRTFTPCIGMRPNSFISEASRETGMVIINS 399

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           LALVETLMD N+WAEMFPC+IART+TTDVISSGMGGTRNGALQLMHAELQVLSPLVP+RE
Sbjct: 400 LALVETLMDSNKWAEMFPCLIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPIRE 459

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVE 529
           VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP F N RRLPSGCVVQDMPNGYSKVTWVE
Sbjct: 460 VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFPNSRRLPSGCVVQDMPNGYSKVTWVE 519

Query: 530 HAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           HAEY+E   H LY+ LI +GMGFGAQRWVATLQRQCECLAILMS++VSARDHT I
Sbjct: 520 HAEYEEGANHHLYRQLISAGMGFGAQRWVATLQRQCECLAILMSSTVSARDHTAI 574


>gi|356532068|ref|XP_003534596.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 820

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/597 (77%), Positives = 513/597 (85%), Gaps = 33/597 (5%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFLE   +  SGGGG RIVADI Y+NN   +NN MP++  ++ PRL + T   L K
Sbjct: 1   MSFGGFLE---TKQSGGGGGRIVADIPYSNN---SNNIMPSSA-ISQPRLATPT---LVK 50

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           SMFNSPGLSLALQ    D  G  D+  + M E+FE    RR+RE+  EHESRSGSDNMDG
Sbjct: 51  SMFNSPGLSLALQS---DIDGKRDVN-RLMPENFEQNGLRRNREE--EHESRSGSDNMDG 104

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
            SGDD DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELS+RL LETRQVKF
Sbjct: 105 GSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRLNLETRQVKF 164

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMKTQLERHENSLLRQENDKLRAENMS+R+AMRNPICTNCGGPA+IG+ISLEE
Sbjct: 165 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPICTNCGGPAMIGEISLEE 224

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGLSS 297
           QHLRIENARLKDELDRVCALAGKFLGRP+SS+     PP+PNSSLELGVG+ NGFGGLS 
Sbjct: 225 QHLRIENARLKDELDRVCALAGKFLGRPISSLTGSIGPPLPNSSLELGVGS-NGFGGLS- 282

Query: 298 TVTTTLPADFGTGISNALPVVMPPNRSGPGV---------TGLD-RSIERSMFLELALAA 347
           TV +T+P DFG GIS+ L +V P +               +G D RSIERS+ LELALAA
Sbjct: 283 TVPSTMP-DFGVGISSPLAMVSPSSTRPTTTATTTLVTPPSGFDNRSIERSIVLELALAA 341

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
           MDELVKMAQTDEPLWIRS EG GR++LNH+EY RT TPCIGL+PNGFVTEASR+TGMVII
Sbjct: 342 MDELVKMAQTDEPLWIRSLEG-GREILNHDEYTRTITPCIGLRPNGFVTEASRQTGMVII 400

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           NSLALVETLMD NRW+EMFPCMIART+T +VIS+G+ GTRNGALQLMHAELQVLSPLVPV
Sbjct: 401 NSLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPV 460

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           REVNFLRFCKQHAEG+WAVVDVSIDTIR+TSGAP FVNCRRLPSGCVVQDMPNGYSKVTW
Sbjct: 461 REVNFLRFCKQHAEGLWAVVDVSIDTIRDTSGAPTFVNCRRLPSGCVVQDMPNGYSKVTW 520

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           VEHAEYDESQ+HQLY+PL+ SGMGFGAQRWVATLQRQCECLAIL+S++V +R+H+ I
Sbjct: 521 VEHAEYDESQIHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILISSAVPSREHSAI 577


>gi|224063979|ref|XP_002301331.1| predicted protein [Populus trichocarpa]
 gi|222843057|gb|EEE80604.1| predicted protein [Populus trichocarpa]
          Length = 790

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/551 (80%), Positives = 486/551 (88%), Gaps = 18/551 (3%)

Query: 39  MPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGII 98
           MPT   +A  RL+S +   ++KSMFNSPGLSLALQQPNID QG     + RM E+FE  +
Sbjct: 1   MPTGA-IAQTRLVSPS---ITKSMFNSPGLSLALQQPNIDGQG----DITRMAENFETSV 52

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           GRRSRE+  EHESRSGSDNMDGASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPH
Sbjct: 53  GRRSREE--EHESRSGSDNMDGASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPH 110

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQRLELS+RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQ+NDKLRAENMSIRDA
Sbjct: 111 PDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQDNDKLRAENMSIRDA 170

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV--SSMGPPP 276
           MRNP C+NCGGPAIIGD+SLEEQHLRIENARLKDELDRVCALAGKFLGRP+   +    P
Sbjct: 171 MRNPSCSNCGGPAIIGDMSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSLASSLSP 230

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLP--ADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
             NSSLEL VG+ NGF GL ST+ TTLP    F  GIS AL +V     +  GVTG+DRS
Sbjct: 231 PTNSSLELAVGS-NGFAGL-STIATTLPLGPHFEGGISGALSMVTQTRLATAGVTGIDRS 288

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           +ERSMFLELALAAMDELVKM QTDEPLWI SFEG GR++LNHE YLRTFTPCIG+KP+GF
Sbjct: 289 VERSMFLELALAAMDELVKMVQTDEPLWIGSFEG-GREILNHEGYLRTFTPCIGMKPSGF 347

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           V+EASRETGMVIINSLALVETLMD NRWAEMFPCMIART+TTDVI+SGMGGTRNG+LQLM
Sbjct: 348 VSEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTDVIASGMGGTRNGSLQLM 407

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA-PAFVNCRRLPSGC 513
            AEL VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR+TSGA P FVNCRRLPSGC
Sbjct: 408 QAELHVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRDTSGAPPTFVNCRRLPSGC 467

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           VVQDMPNGYSKVTWVEHA+YDE Q+HQLY+P+I SGMGFGAQRW+ATLQRQCECLAIL+S
Sbjct: 468 VVQDMPNGYSKVTWVEHAQYDERQIHQLYRPVISSGMGFGAQRWIATLQRQCECLAILLS 527

Query: 574 TSVSARDHTGI 584
           ++V +RDHT I
Sbjct: 528 SNVPSRDHTAI 538


>gi|356568318|ref|XP_003552359.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 822

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/596 (77%), Positives = 510/596 (85%), Gaps = 28/596 (4%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNN--NNMPTTTTLAHPRLLSSTPQPL 58
           MSFGGFLE     S GGGG  +V+DI Y +N+ +N+  + MP+   ++ PRL + T   L
Sbjct: 1   MSFGGFLETK--QSDGGGGRIVVSDIPYNSNNGSNHSNDIMPSGA-ISLPRLATPT---L 54

Query: 59  SKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNM 118
           +KSMFNSPGLSLALQ    D  G GD+  + M E+FE    RRSRE+  EHESRSGSDNM
Sbjct: 55  AKSMFNSPGLSLALQS---DIDGQGDMN-RLMPENFEQNGLRRSREE--EHESRSGSDNM 108

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           DG SGDD DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELS+RL LETRQV
Sbjct: 109 DGGSGDDFDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSRRLNLETRQV 168

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS+R+AMRNPIC+NCGGPA+IG+ISL
Sbjct: 169 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSMREAMRNPICSNCGGPAMIGEISL 228

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGL 295
           EEQHLRIENARLKDELDRVCALAGKFLGRPVSS+     PPMPNSSLELGVG+ NGFG  
Sbjct: 229 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSLTSSIGPPMPNSSLELGVGS-NGFGQG 287

Query: 296 SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL-------DRSIERSMFLELALAAM 348
            STV +T+P DFG GIS+ L +V  P+ + P  T L       +RSIERS+ LELALAAM
Sbjct: 288 LSTVPSTMP-DFGVGISSPLAMV-SPSSTRPTTTALVTPSGFDNRSIERSIVLELALAAM 345

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIIN 408
           DELVKMAQT EPLWIRS EG GR++LNHEEY RT TPCIGL+PNGFVTEASR+TGMVIIN
Sbjct: 346 DELVKMAQTGEPLWIRSLEG-GREILNHEEYTRTITPCIGLRPNGFVTEASRQTGMVIIN 404

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVR 468
           SLALVETLMD NRW+EMFPCMIART+T +VIS+G+ GTRNGALQLMHAELQVLSPLVPVR
Sbjct: 405 SLALVETLMDSNRWSEMFPCMIARTSTAEVISNGINGTRNGALQLMHAELQVLSPLVPVR 464

Query: 469 EVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
           EVNFLRFCKQHAEG+WAVVDVSIDTIRETSGAP FVNCRRLPSGCVVQDMPNGYSKVTWV
Sbjct: 465 EVNFLRFCKQHAEGLWAVVDVSIDTIRETSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWV 524

Query: 529 EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           EHAEYDESQ+HQL++PL+ SGMGFGAQRWV TLQRQCECLAILMS++  +R+H+ I
Sbjct: 525 EHAEYDESQIHQLFRPLLSSGMGFGAQRWVTTLQRQCECLAILMSSAAPSREHSAI 580


>gi|296089063|emb|CBI38766.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/586 (77%), Positives = 488/586 (83%), Gaps = 68/586 (11%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGGFL+N    SSGGGGARIVADI Y+NN          T  +A PRL+S +   L+K
Sbjct: 1   MSFGGFLDN----SSGGGGARIVADIPYSNN--------MATGAIAQPRLVSPS---LAK 45

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           SMF+SPGLSLALQ  +++ QG    ++ R+ E+FE   GRRSRED  EHESRSGSDNMDG
Sbjct: 46  SMFSSPGLSLALQT-SMEGQG----EVTRLAENFESGGGRRSRED--EHESRSGSDNMDG 98

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           ASGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELS+RL LETRQVKF
Sbjct: 99  ASGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLSLETRQVKF 158

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMKTQLERHENS+LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE
Sbjct: 159 WFQNRRTQMKTQLERHENSILRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 218

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMG---PPPMPNSSLELGVGTINGFGGLSS 297
           QHLRIENARLKDELDRVCALAGKFLGRP+SS+     P MP+SSLELGVG+    GG+SS
Sbjct: 219 QHLRIENARLKDELDRVCALAGKFLGRPISSLASSMAPAMPSSSLELGVGS---NGGISS 275

Query: 298 TVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQT 357
           T                                       SMFLELALAAMDELVKMAQT
Sbjct: 276 T---------------------------------------SMFLELALAAMDELVKMAQT 296

Query: 358 DEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLM 417
           DEPLW+RS EG GR++LN EEY+RTFTPCIG+KP+GFVTE++RETGMVIINSLALVETLM
Sbjct: 297 DEPLWVRSLEG-GREILNLEEYMRTFTPCIGMKPSGFVTESTRETGMVIINSLALVETLM 355

Query: 418 DPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCK 477
           D NRWAEMFPCMIART+TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCK
Sbjct: 356 DSNRWAEMFPCMIARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCK 415

Query: 478 QHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ 537
           QHAEGVWAVVDVSIDTIRETS AP FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES 
Sbjct: 416 QHAEGVWAVVDVSIDTIRETSVAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESA 475

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           VHQLY+PL+ SGMGFGAQRWVATLQRQCECLAILMS++V  RDHT 
Sbjct: 476 VHQLYRPLLGSGMGFGAQRWVATLQRQCECLAILMSSTVPTRDHTA 521


>gi|449454480|ref|XP_004144982.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449473159|ref|XP_004153804.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
 gi|449522284|ref|XP_004168157.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 841

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/580 (77%), Positives = 496/580 (85%), Gaps = 27/580 (4%)

Query: 20  ARIVADISYTNNDNNNNNNMP----------TTTTLAHPRLLSSTPQPLSKSMFNSPGLS 69
           ARI+AD+ YTNN   N NN P          +++ +A PRL++   Q L+KSMFNSPGLS
Sbjct: 19  ARILADLPYTNNSTTNANNNPTGGIGGGGNMSSSAIAPPRLIT---QSLTKSMFNSPGLS 75

Query: 70  LALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAA 129
           LAL   N+D  G GDL   R+ E FE  +GRR RE+  EHESRSGSDNMDG SGDD DAA
Sbjct: 76  LALT--NMDG-GPGDLA-ARLPEGFEHNVGRRGREE--EHESRSGSDNMDGGSGDDQDAA 129

Query: 130 DNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           DNPPRKKRYHRHTPQQIQELE++FKECPHPDEKQRLELS+RLCLETRQVKFWFQNRRTQM
Sbjct: 130 DNPPRKKRYHRHTPQQIQELEAVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQM 189

Query: 190 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENAR 249
           KTQLERHEN+LLRQENDKLRAENMSIRDAMRNPIC+NCGGPAIIG+ISLEEQ LRIENAR
Sbjct: 190 KTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGEISLEEQQLRIENAR 249

Query: 250 LKDELDRVCALAGKFLGRPVSSMG---PPPMPNSSLELGVGTINGFGGLSSTVTTTLPAD 306
           LKDELDRVCALAGKFLGRP+SS+     PP+P+SSLELGVG+ NGFG L+   +  +  D
Sbjct: 250 LKDELDRVCALAGKFLGRPISSLANSIAPPLPSSSLELGVGS-NGFGSLTMATSMPIGPD 308

Query: 307 FGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF 366
           FG G+S  L VV  P R  PG+ GLDRS+ERSM LELALAAMDELVKMAQTDEPLWI S 
Sbjct: 309 FGGGLSGNLAVVQAPARPTPGM-GLDRSVERSMLLELALAAMDELVKMAQTDEPLWIGSL 367

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           EG GR++LN EEY+RTFTPCIG+KPNGFVTEASRE+GMVIINSLALVETLMD NRWAEMF
Sbjct: 368 EG-GREILNQEEYMRTFTPCIGMKPNGFVTEASRESGMVIINSLALVETLMDSNRWAEMF 426

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
           PCMIART TTDVIS+GMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV
Sbjct: 427 PCMIARTTTTDVISTGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486

Query: 487 VDVSIDTIRE--TSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKP 544
           VDVS+D +RE  T G  +F NCRRLPSGCVVQDMPNGYSKVTWVEHAEYD+SQVHQLY+P
Sbjct: 487 VDVSVDAMRETPTGGGSSFGNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDDSQVHQLYRP 546

Query: 545 LIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           L+ SGMGFGAQRWV TLQRQCECLAILMS++V  RDHT I
Sbjct: 547 LLSSGMGFGAQRWVTTLQRQCECLAILMSSAVPIRDHTAI 586


>gi|356520461|ref|XP_003528880.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 829

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/596 (76%), Positives = 503/596 (84%), Gaps = 31/596 (5%)

Query: 1   MSFGGFLENNISTSSGGGGARI-VADISYTNNDNNNN-----NNMPTTTTLAHPRLLSST 54
           MSFGG L+N     SG GGAR  V+DI Y NN+  N      + MP    ++ PRL+++T
Sbjct: 1   MSFGGLLDNK----SGSGGARNNVSDIPYNNNNVTNTTTTNNDRMPFGA-ISQPRLVTTT 55

Query: 55  PQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIG-RRSREDLLEHESRS 113
           P  L+KSMFNS GLSLALQQ NID    G   + RM E+     G RRSRED  EHESRS
Sbjct: 56  PT-LAKSMFNSSGLSLALQQTNID----GQEDVNRMAENTSEPNGLRRSRED--EHESRS 108

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GSDNMDGASGD+ DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELS+RLCL
Sbjct: 109 GSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCL 168

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           ETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIRDAMRNP+C+NCGGPAII
Sbjct: 169 ETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAII 228

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           G+ISLEEQHLRIENARLKDELDRVC LAGKFLGRPVSS+      +SSLELG+   NGF 
Sbjct: 229 GEISLEEQHLRIENARLKDELDRVCVLAGKFLGRPVSSLP-----SSSLELGMRG-NGFA 282

Query: 294 GLSSTVTTTLPADFGTGIS-----NALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAM 348
           G+ +  T  L  DF  G+S     NAL +V PP  +     G DRS+ERSMFLELALAAM
Sbjct: 283 GIPAATTLPLGQDFDMGMSVSMNNNALAMVSPPTSARAAAAGFDRSVERSMFLELALAAM 342

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIIN 408
           DELVK+AQT EPLW+R+ EG GR++LN+EEY+RTFTPCIGL+PNGFV+EASRE GMVIIN
Sbjct: 343 DELVKIAQTGEPLWMRNVEG-GREILNNEEYVRTFTPCIGLRPNGFVSEASRENGMVIIN 401

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVR 468
           SLALVETLMD NRWAEMFPC+IART+TT+VISSG+ GTRNGALQLMHAELQVLSPLVPVR
Sbjct: 402 SLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVR 461

Query: 469 EVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
           EVNFLRFCKQHAEGVWAVVDVSID+IRE+SGAP FVNCRRLPSGCVVQDMPNGYSKVTWV
Sbjct: 462 EVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWV 521

Query: 529 EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           EHAEYDESQVHQLY+PL+ SGMGFGAQRWVATLQRQCECLAILMS++  +RDH+ I
Sbjct: 522 EHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAI 577


>gi|356505007|ref|XP_003521284.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 835

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/600 (75%), Positives = 501/600 (83%), Gaps = 39/600 (6%)

Query: 1   MSFGGFLENNISTSSGGGGARI--VADISYTNNDNNNN--------NNMPTTTTLAHPRL 50
           MSFGGFL++     SG GGARI   +DI Y NN+  N         + MP    ++ PRL
Sbjct: 1   MSFGGFLDDK----SGSGGARINNFSDIPYNNNNVTNTTTTNNNNNDRMPFGA-ISQPRL 55

Query: 51  LSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGE-SFEGIIGRRSREDLLEH 109
           +++TP  L+KSMFNSPGLSLALQ  +ID    G   + RM E SFE    RRSRED  EH
Sbjct: 56  VTTTPT-LAKSMFNSPGLSLALQT-SID----GQEDVNRMAENSFEPNGLRRSRED--EH 107

Query: 110 ESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           ESRSGSDNMDG SGD+ DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRLELS+
Sbjct: 108 ESRSGSDNMDGGSGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSR 167

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RLCLETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIRDAMRNP+C+NCGG
Sbjct: 168 RLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGG 227

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
            AIIG+ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS+        SLELG+G  
Sbjct: 228 LAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSL-------PSLELGMGG- 279

Query: 290 NGFGGLSSTVTTTLPADFGTGIS-----NALPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
           NGF G+ +  T  L  DF  G+S     NAL +V PP  + P   G DRS+ERSMFLELA
Sbjct: 280 NGFAGMPAA-TLPLAQDFAMGMSVSMNNNALAMVSPPTSTRPAAAGFDRSVERSMFLELA 338

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           LAAMDELVKMAQT EPLW+R+ EG GR++LNHEEY+R FTP IGL+PNGFV+EASRE GM
Sbjct: 339 LAAMDELVKMAQTGEPLWMRNVEG-GREILNHEEYVRNFTPSIGLRPNGFVSEASRENGM 397

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           VIINSLALVETLMD NRWAEMFPC+IART+TT+VISSG+ GTRNGALQLMHAELQVLSPL
Sbjct: 398 VIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPL 457

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           VPVREVNFLRFCKQHAEG+WAVVDVSID+IRE+SGAP FVN RRLPSGCVVQDMPNGYSK
Sbjct: 458 VPVREVNFLRFCKQHAEGLWAVVDVSIDSIRESSGAPTFVNGRRLPSGCVVQDMPNGYSK 517

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           VTWVEHAEY+ESQVHQLY+PL+ SGMGFGAQRWVATLQRQCECLAILMS++  +RDH+ I
Sbjct: 518 VTWVEHAEYEESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAI 577


>gi|177667009|gb|ACB73218.1| homeodomain protein GL2-like 1 [Gossypium hirsutum]
          Length = 772

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/551 (79%), Positives = 475/551 (86%), Gaps = 35/551 (6%)

Query: 39  MPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGII 98
           MPT    + PRL+   P  + K+MFNSPGLSLALQQPNIDNQG       R+GE+FEG I
Sbjct: 1   MPTGV-FSQPRLV---PSSIPKNMFNSPGLSLALQQPNIDNQGDE----TRLGENFEGSI 52

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLD----AADNPPRKKRYHRHTPQQIQELESLFK 154
           GRRSRE+  EHESRSGSDNMDG SGDD D    A D PPRKKRYHRHTPQQIQELE+LFK
Sbjct: 53  GRRSREE--EHESRSGSDNMDGGSGDDHDPTTAAGDKPPRKKRYHRHTPQQIQELEALFK 110

Query: 155 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 214
           ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS
Sbjct: 111 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 170

Query: 215 IRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
           IRDAMRNPICTNCGGPAIIGD+SLEEQ LRIENARLKDELDRVCALAGKFLGRP++    
Sbjct: 171 IRDAMRNPICTNCGGPAIIGDMSLEEQLLRIENARLKDELDRVCALAGKFLGRPITG--- 227

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALP-VVMPPNRSGPGVTGLDR 333
           PP+PNSSLELGVGT NG  G +   TTTLP        +ALP +V+P NR  P  T    
Sbjct: 228 PPLPNSSLELGVGT-NGTFGTTMATTTTLPLGH-----DALPTMVVPSNR--PATT---- 275

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
            ++RSMFLELALAAMDELVKMAQTDEPLWI++ EG GR++LNH+EYLRTFTPCIGLKPNG
Sbjct: 276 -LDRSMFLELALAAMDELVKMAQTDEPLWIKNIEG-GREMLNHDEYLRTFTPCIGLKPNG 333

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           FVTEASRETG+VIINSLALVETLMD NRWAEMF CMIART+TTDVIS+GMGGTRNGALQL
Sbjct: 334 FVTEASRETGVVIINSLALVETLMDSNRWAEMFHCMIARTSTTDVISNGMGGTRNGALQL 393

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M+AELQ+LSPLVPVREV+FLRFCKQHAEGVWAVVDVS+DTI+E++    FV CRRLPSGC
Sbjct: 394 MNAELQILSPLVPVREVSFLRFCKQHAEGVWAVVDVSVDTIKEST---TFVTCRRLPSGC 450

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           VVQDMPNGYSKV W EHAEYDESQVHQLY+PL+ SG+GFGAQRWVA LQRQCECLAILMS
Sbjct: 451 VVQDMPNGYSKVIWAEHAEYDESQVHQLYRPLLSSGVGFGAQRWVAALQRQCECLAILMS 510

Query: 574 TSVSARDHTGI 584
           ++V  RDHT I
Sbjct: 511 STVPTRDHTAI 521


>gi|357507075|ref|XP_003623826.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355498841|gb|AES80044.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 778

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/557 (75%), Positives = 469/557 (84%), Gaps = 34/557 (6%)

Query: 39  MPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGII 98
           MP++  ++ PRL  STP  L KSMFNS GLSLALQ  N++ QGG   +L  M E+F    
Sbjct: 1   MPSSA-ISQPRL--STPT-LVKSMFNSSGLSLALQT-NLEAQGGDMKRL--MAENFHQTN 53

Query: 99  G--RRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKEC 156
              RR+RE+      RSGSDNMDG SGDD DAADNPPRKKRYHRHTPQQIQELES+FKEC
Sbjct: 54  NGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKEC 113

Query: 157 PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIR 216
           PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQ NDKLRAENMSIR
Sbjct: 114 PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIR 173

Query: 217 DAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           +AMRNP+C+NCGGPAII +ISLEEQHLRIENARLKDELDRVC LAGKFLGRP++S     
Sbjct: 174 EAMRNPMCSNCGGPAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITS----- 228

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLP--ADFGTGISNALPVVMPPNRSGPGVT----- 329
           +PNSSLE+      GF GL++T+ +T+P   DFG  +S + P +    R    VT     
Sbjct: 229 LPNSSLEI------GFVGLNNTLPSTMPLGQDFGM-VSMSPPSI---TRGTSMVTNTNSN 278

Query: 330 GLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF-TPCIG 388
           G DRS+ERSMFLELALAAMDELVKMAQT+EPLWIRS E SG+++ NHEEY R   TPCIG
Sbjct: 279 GFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVE-SGKEIFNHEEYTRIISTPCIG 337

Query: 389 LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN 448
           LKPNGFV+EASRE+G+VIINSLALVETLMD NRW+EMFPC+IAR++TT+VISSG+ GTRN
Sbjct: 338 LKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRN 397

Query: 449 GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCR 507
           GALQLM AELQVLSPLVPVREV+FLRFCKQHAEGVWAVVDVSIDTIRETS GAP F+ CR
Sbjct: 398 GALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIRETSAGAPTFLTCR 457

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           RLPSGCVVQDMPNGYSKVTWVEHAEY+ESQVHQLY+PL+  GMGFGAQRWVATLQRQCEC
Sbjct: 458 RLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQRQCEC 517

Query: 568 LAILMSTSVSARDHTGI 584
           LAILMS+S+ +R+H+ I
Sbjct: 518 LAILMSSSLPSREHSAI 534


>gi|312282947|dbj|BAJ34339.1| unnamed protein product [Thellungiella halophila]
          Length = 795

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/594 (64%), Positives = 443/594 (74%), Gaps = 48/594 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           M+FG   +N  +T     GARI++ ++Y N+    +  +P           S    P++K
Sbjct: 1   MNFGSLFDN--TTGGASTGARILSGLTYGNH-TTTSTVIPGGAMAQAAAAASLFSPPITK 57

Query: 61  SMFNSPGLSLALQQPNI----------DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHE 110
           S++ S GLSLAL+QP            +N GGGD        +F+G   RRSRE+  EHE
Sbjct: 58  SVYASSGLSLALEQPERGINRGEASMRNNNGGGD--------NFDGSANRRSREE--EHE 107

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
           SRSGSDN++G SG+D DA D PPRKKRYHRHTPQQIQELES+FKECPHPDEKQRLELSKR
Sbjct: 108 SRSGSDNVEGISGEDQDADDKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKR 167

Query: 171 LCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 230
           LCLETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGP
Sbjct: 168 LCLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGP 227

Query: 231 AIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTIN 290
           A++GD+SLEE HLRIENARLKDELDRVC L GKFLG            NSSLEL VGT N
Sbjct: 228 AMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHQHH-------NSSLELAVGTNN 280

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE 350
           G G  +       P DF         +     +   G+ G+D   +RS+ LELAL AMDE
Sbjct: 281 G-GDFA------FPPDF---GGGGGCLPQTQQQQPTGINGID---QRSVLLELALTAMDE 327

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           LVK+A ++EPLW++S +G  R  LN EEY+RTF+     KP G VTEAS+ +GMVIINSL
Sbjct: 328 LVKLAHSEEPLWVKSLDGE-RDELNEEEYMRTFS---STKPTGLVTEASKISGMVIINSL 383

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
           ALVETLMD NRW EMFPC +AR ATTDVIS GM GTRNGALQLM+AELQVLSPLVPVR V
Sbjct: 384 ALVETLMDSNRWTEMFPCNVARAATTDVISGGMAGTRNGALQLMNAELQVLSPLVPVRNV 443

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           NFLRFCKQHAEGVWA VDVSIDT+RE SG    +  RRLPSGCVVQDM NGYSKVTWVEH
Sbjct: 444 NFLRFCKQHAEGVWAAVDVSIDTVRENSGVSPVI-IRRLPSGCVVQDMSNGYSKVTWVEH 502

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           AEYDE+Q+H LY+PLI SG+GFG+QRWVATLQRQCECLAILMS+SV++ D+T I
Sbjct: 503 AEYDENQIHHLYRPLIRSGLGFGSQRWVATLQRQCECLAILMSSSVTSPDNTSI 556


>gi|30678721|ref|NP_567183.2| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|122223902|sp|Q0WV12.1|ANL2_ARATH RecName: Full=Homeobox-leucine zipper protein ANTHOCYANINLESS 2;
           AltName: Full=HD-ZIP protein ANL2; AltName:
           Full=Homeodomain protein AHDP; AltName: Full=Homeodomain
           transcription factor ANL2
 gi|110742219|dbj|BAE99036.1| homeodomain protein AHDP [Arabidopsis thaliana]
 gi|332656526|gb|AEE81926.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 802

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/591 (64%), Positives = 448/591 (75%), Gaps = 38/591 (6%)

Query: 1   MSFGGFLENNISTSSGGG--GARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPL 58
           M+FG   +N    + GGG  GAR+++ +SY N+     N +P           S    PL
Sbjct: 1   MNFGSLFDN----TPGGGSTGARLLSGLSYGNH-TAATNVLPGGAMAQAAAAASLFSPPL 55

Query: 59  SKSMFNSPGLSLALQQPNI-DNQGGGDLQLQRMG----ESFEGIIGRRSREDLLEHESRS 113
           +KS++ S GLSLAL+QP    N+G   ++         ++F+G + RRSRE+  EHESRS
Sbjct: 56  TKSVYASSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREE--EHESRS 113

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GSDN++G SG+D DAAD PPRKKRYHRHTPQQIQELES+FKECPHPDEKQRLELSKRLCL
Sbjct: 114 GSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCL 173

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           ETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGPA++
Sbjct: 174 ETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPAML 233

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           GD+SLEE HLRIENARLKDELDRVC L GKFLG   +        NSSLEL VGT N  G
Sbjct: 234 GDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNHHY-----NSSLELAVGTNNNGG 288

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
             +       P DF  G    LP   P  +    + G+D   ++S+ LELAL AMDELVK
Sbjct: 289 HFA------FPPDF-GGGGGCLP---PQQQQSTVINGID---QKSVLLELALTAMDELVK 335

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           +AQ++EPLW++S +G  R  LN +EY+RTF+     KP G  TEASR +GMVIINSLALV
Sbjct: 336 LAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 391

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQLM+AELQVLSPLVPVR VNFL
Sbjct: 392 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 451

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           RFCKQHAEGVWAVVDVSID +RE SG    +  RRLPSGCVVQD+ NGYSKVTWVEHAEY
Sbjct: 452 RFCKQHAEGVWAVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEY 509

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           DE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T I
Sbjct: 510 DENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSI 560


>gi|5702094|gb|AAD47139.1|AF077335_1 Anthocyaninless2 [Arabidopsis thaliana]
          Length = 801

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/591 (64%), Positives = 448/591 (75%), Gaps = 39/591 (6%)

Query: 1   MSFGGFLENNISTSSGGG--GARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPL 58
           M+FG   +N    + GGG  GAR+++ +SY N+     N +P           S    PL
Sbjct: 1   MNFGSLFDN----TPGGGSTGARLLSGLSYGNH-TAATNVLPGGAMAQAAAAASLFSPPL 55

Query: 59  SKSMFNSPGLSLALQQPNI-DNQGGGDLQLQRMG----ESFEGIIGRRSREDLLEHESRS 113
           +KS++ S GLSLAL+QP    N+G   ++         ++F+G + RRSRE+  EHESRS
Sbjct: 56  TKSVYASSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREE--EHESRS 113

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GSDN++G SG+D DAAD PPRKKRYHRHTPQQIQELES+FKECPHPDEKQRLELSKRLCL
Sbjct: 114 GSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCL 173

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           ETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGPA++
Sbjct: 174 ETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPAML 233

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           GD+SLEE HLRIENARLKDELDRVC L GKFLG   +        NSSLEL VGT NG G
Sbjct: 234 GDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNHHY-----NSSLELAVGTNNG-G 287

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
             +       P DF  G    LP   P  +    + G+D   ++S+ LELAL AMDELVK
Sbjct: 288 HFA------FPPDF-GGGGGCLP---PQQQQSTVINGID---QKSVLLELALTAMDELVK 334

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           +AQ++EPLW++S +G  R  LN +EY+RTF+     KP G  TEASR +GMVIINSLALV
Sbjct: 335 LAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 390

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQLM+AELQVLSPLVPVR VNFL
Sbjct: 391 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 450

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           RFCKQHAEGVW VVDVSID +RE SG    +  RRLPSGCVVQD+ NGYSKVTWVEHAEY
Sbjct: 451 RFCKQHAEGVWPVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEY 508

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           DE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAILMS+SV++ D+T I
Sbjct: 509 DENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILMSSSVTSHDNTSI 559


>gi|186511404|ref|NP_001118907.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
 gi|332656527|gb|AEE81927.1| homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Arabidopsis
           thaliana]
          Length = 570

 Score =  733 bits (1893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/589 (64%), Positives = 447/589 (75%), Gaps = 38/589 (6%)

Query: 1   MSFGGFLENNISTSSGGG--GARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPL 58
           M+FG   +N    + GGG  GAR+++ +SY N+     N +P           S    PL
Sbjct: 1   MNFGSLFDN----TPGGGSTGARLLSGLSYGNH-TAATNVLPGGAMAQAAAAASLFSPPL 55

Query: 59  SKSMFNSPGLSLALQQPNI-DNQGGGDLQLQRMG----ESFEGIIGRRSREDLLEHESRS 113
           +KS++ S GLSLAL+QP    N+G   ++         ++F+G + RRSRE+  EHESRS
Sbjct: 56  TKSVYASSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREE--EHESRS 113

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GSDN++G SG+D DAAD PPRKKRYHRHTPQQIQELES+FKECPHPDEKQRLELSKRLCL
Sbjct: 114 GSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCL 173

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           ETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGPA++
Sbjct: 174 ETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPAML 233

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           GD+SLEE HLRIENARLKDELDRVC L GKFLG   +        NSSLEL VGT N  G
Sbjct: 234 GDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNH-----HYNSSLELAVGTNNNGG 288

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
             +       P DF  G    LP   P  +    + G+D   ++S+ LELAL AMDELVK
Sbjct: 289 HFA------FPPDF-GGGGGCLP---PQQQQSTVINGID---QKSVLLELALTAMDELVK 335

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           +AQ++EPLW++S +G  R  LN +EY+RTF+     KP G  TEASR +GMVIINSLALV
Sbjct: 336 LAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALV 391

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQLM+AELQVLSPLVPVR VNFL
Sbjct: 392 ETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFL 451

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           RFCKQHAEGVWAVVDVSID +RE SG    +  RRLPSGCVVQD+ NGYSKVTWVEHAEY
Sbjct: 452 RFCKQHAEGVWAVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEY 509

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHT 582
           DE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T
Sbjct: 510 DENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNT 558


>gi|1814424|gb|AAB41901.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 745

 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/533 (68%), Positives = 423/533 (79%), Gaps = 31/533 (5%)

Query: 57  PLSKSMFNSPGLSLALQQPNI-DNQGGGDLQLQRMG----ESFEGIIGRRSREDLLEHES 111
           PL+KS++ S GLSLAL+QP    N+G   ++         ++F+G + RRSRE+  EHES
Sbjct: 14  PLTKSVYASSGLSLALEQPERGTNRGEASMRNNNNVGGGGDTFDGSVNRRSREE--EHES 71

Query: 112 RSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           RSGSDN++G SG+D DAAD PPRKKRYHRHTPQQIQELES+FKECPHPDEKQRLELSKRL
Sbjct: 72  RSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRL 131

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
           CLETRQVKFWFQNRRTQMKTQLERHEN+LLRQENDKLRAENMSIR+AMRNPICTNCGGPA
Sbjct: 132 CLETRQVKFWFQNRRTQMKTQLERHENALLRQENDKLRAENMSIREAMRNPICTNCGGPA 191

Query: 232 IIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTING 291
           ++GD+SLEE HLRIENARLKDELDRVC L GKFLG   +        NSSLEL VGT N 
Sbjct: 192 MLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNHHY-----NSSLELAVGTNNN 246

Query: 292 FGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDEL 351
            G  +       P DF  G    LP   P  +    + G+D   ++S+ LELAL AMDEL
Sbjct: 247 GGHFA------FPPDF-GGGGGCLP---PQQQQSTVINGID---QKSVLLELALTAMDEL 293

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLA 411
           VK+AQ++EPLW++S +G  R  LN +EY+RTF+     KP G  TEASR +GMVIINSLA
Sbjct: 294 VKLAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLA 349

Query: 412 LVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVN 471
           LVETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQLM+AELQVLSPLVPVR VN
Sbjct: 350 LVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVN 409

Query: 472 FLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 531
           FLRFCKQHAEGVWAVVDVSID +RE SG    +  RRLPSGCVVQD+ NGYSKVTWVEHA
Sbjct: 410 FLRFCKQHAEGVWAVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHA 467

Query: 532 EYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           EYDE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T I
Sbjct: 468 EYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSI 520


>gi|356535894|ref|XP_003536477.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 751

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/508 (67%), Positives = 409/508 (80%), Gaps = 12/508 (2%)

Query: 83  GDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPP-RKKRYHRH 141
           G  ++  +GE+F+  +  R R+D  E+ESRSGSDN +GASGDD D  D+ P RKKRYHRH
Sbjct: 3   GPSEIGLIGENFDAGLMGRMRDD--EYESRSGSDNFEGASGDDQDGGDDQPQRKKRYHRH 60

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           TP QIQELE+ FKECPHPDEKQRL+LSKRL LE +QVKFWFQNRRTQMKTQLERHEN +L
Sbjct: 61  TPHQIQELEAFFKECPHPDEKQRLDLSKRLALENKQVKFWFQNRRTQMKTQLERHENIML 120

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALA 261
           RQENDKLRAEN  ++DAM NP+C NCGGPAI G IS EE  +RIENARLKDEL+R+CALA
Sbjct: 121 RQENDKLRAENSLMKDAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICALA 180

Query: 262 GKFLGRPVSSMGPP---PMPNSSLELGVGTINGFGGLSSTVTTTLPA--DFGTGISNALP 316
            KFLG+P+SS+  P   P  NS LELG+G  NG GG SST+ T LP   D G G+    P
Sbjct: 181 NKFLGKPISSLTNPMALPTSNSGLELGIGR-NGIGG-SSTLGTPLPMGLDLGDGVLGTQP 238

Query: 317 VVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNH 376
             MP  R   G+ G +  +ERSM ++LALAAM+EL+KM Q + PLWI+S +G  +++ NH
Sbjct: 239 A-MPGIRPALGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGE-KEMFNH 296

Query: 377 EEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATT 436
           EEY R F+PCIG KP G++TEA+RETG+VIINSLALVETLMD NRWAEMFP MIAR    
Sbjct: 297 EEYARLFSPCIGPKPTGYITEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINL 356

Query: 437 DVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE 496
           DVIS+GMGGTRNGALQ+MHAE+Q+LSPLVPVR+V F+RFCKQHAEGVWAVVDVSI+   +
Sbjct: 357 DVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGHD 416

Query: 497 TSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQR 556
            + A   ++CRRLPSGC+VQDMPNGYSKVTW+EH EYDE+ VHQLY+PL+ SG+GFGA R
Sbjct: 417 AANAQPVMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHR 476

Query: 557 WVATLQRQCECLAILMSTSVSARDHTGI 584
           W+ATLQRQCECLAILMS+S+S+ DHT +
Sbjct: 477 WIATLQRQCECLAILMSSSISSDDHTAL 504


>gi|19070143|gb|AAL83725.1|AF328842_1 homeodomain protein HB2 [Picea abies]
          Length = 708

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/476 (70%), Positives = 380/476 (79%), Gaps = 28/476 (5%)

Query: 117 NMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           +MDG SGDD DAADNPPRKKRYHRHTPQQIQELE+LFKECPHPDEKQRL++SKRL LETR
Sbjct: 9   HMDGGSGDDQDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLDISKRLNLETR 68

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QVK WFQNRRTQMKTQLERHENS+LRQEN+KLR+EN+SIRDAMRNPICTNCGGPA++G++
Sbjct: 69  QVKLWFQNRRTQMKTQLERHENSILRQENEKLRSENLSIRDAMRNPICTNCGGPAVLGEM 128

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGFGGL 295
           S EEQ LRIENARLK ELDR+CALAGKF GRPV SM   P MP SSL+LGVG        
Sbjct: 129 SFEEQQLRIENARLKKELDRLCALAGKFFGRPVPSMPSVPLMPKSSLDLGVG-------- 180

Query: 296 SSTVTTTLPADFGTGISNALPVVMPPNRSGP--GVTGLDRSIERSMFLELALAAMDELVK 353
                  +P    +G ++ +         GP  G TG    IERSM  ELALA+MDEL K
Sbjct: 181 ------GMPTSLPSGCADLM--------HGPAGGRTGNIIGIERSMLAELALASMDELFK 226

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           MAQ DE LWI + + +G++ LN+EEY+R F   I  K  G  TEA+RETGMVI NSL LV
Sbjct: 227 MAQADETLWIPNLD-AGKETLNYEEYMRQFPSTITPKLIGLATEATRETGMVITNSLNLV 285

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ETLMD +RW EMFPCMI+R A  DVISSGM GTRNGALQLM+AELQVLSPLVP REV FL
Sbjct: 286 ETLMDVDRWKEMFPCMISRAAMVDVISSGMSGTRNGALQLMYAELQVLSPLVPAREVYFL 345

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           RFCKQHAEGVWAVVDVS+D++R+ S A  F+ CRRLPSGC++QDMPNGYSKVTWVEHAEY
Sbjct: 346 RFCKQHAEGVWAVVDVSVDSLRDNSPA-GFMKCRRLPSGCLIQDMPNGYSKVTWVEHAEY 404

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS-VSARDHTGIYDIN 588
           D+  VH+LY+ L+ SGM FGAQRW+ATLQRQCECLAILM+T+ V+ARD T I   N
Sbjct: 405 DDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCECLAILMATANVTARDPTAIRTPN 460


>gi|356575937|ref|XP_003556092.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 731

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/488 (69%), Positives = 396/488 (81%), Gaps = 12/488 (2%)

Query: 103 REDLLEHESRSGSDNMDGASGDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDE 161
           R+D  E+ESRSGSDN +GASGDD D  D+ P RKKRYHRHTP QIQELE+ FKECPHPDE
Sbjct: 2   RDD--EYESRSGSDNFEGASGDDQDGGDDQPQRKKRYHRHTPHQIQELEAFFKECPHPDE 59

Query: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           KQRL+LSKRL LE +QVKFWFQNRRTQMKTQLERHEN +LRQENDKLRAEN  I++AM N
Sbjct: 60  KQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLIKEAMSN 119

Query: 222 PICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP---PMP 278
           P+C NCGGPAI G IS EE  +RIENARLKDEL+R+C LA KFLG+P+SS+  P      
Sbjct: 120 PVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICVLANKFLGKPISSLTSPMALTTS 179

Query: 279 NSSLELGVGTINGFGGLSSTVTTTLPA--DFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
           NS LELG+G  NG GG SST+ T LP   D G G+    P  MP  RS  G+ G +  +E
Sbjct: 180 NSGLELGIGR-NGIGG-SSTLGTPLPMGLDLGDGVLGTQPA-MPGVRSALGLMGNEVQLE 236

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVT 396
           RSM ++LALAAM+EL+KM Q + PLWI+S +G  +++ NHEEY R F+PCIG KP G+VT
Sbjct: 237 RSMLIDLALAAMEELLKMTQAESPLWIKSLDGE-KEIFNHEEYARLFSPCIGPKPAGYVT 295

Query: 397 EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHA 456
           EA+RETG+VIINSLALVETLMD NRWAEMFP MIAR    DVIS+GMGGTRNGALQ+MHA
Sbjct: 296 EATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHA 355

Query: 457 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQ 516
           E+Q+LSPLVPVR+V F+RFCKQHAEGVWAVVDVSI+   + + A   ++CRRLPSGC+VQ
Sbjct: 356 EVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGHDAANAQPSISCRRLPSGCIVQ 415

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           DMPNGYSKVTW+EH EYDE+ VHQLY+PL+ SG+GFGA RW+ATLQRQCECLAILMS+S+
Sbjct: 416 DMPNGYSKVTWLEHWEYDENVVHQLYRPLLSSGVGFGAHRWIATLQRQCECLAILMSSSI 475

Query: 577 SARDHTGI 584
           S+  HT +
Sbjct: 476 SSDSHTAL 483


>gi|297817426|ref|XP_002876596.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322434|gb|EFH52855.1| hypothetical protein ARALYDRAFT_324546 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 811

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/587 (61%), Positives = 441/587 (75%), Gaps = 48/587 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNND---NNNNNNMPTTTTLAHPRLLSSTPQP 57
           M+F GFL++        G +++++DI Y NN    +  +  M  TT +A P    S P  
Sbjct: 1   MNFNGFLDDG-----SPGASKLLSDIPYNNNHFSFSAVDTTMLGTTAIAPPH---SRP-- 50

Query: 58  LSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSR--EDLLEHESRSGS 115
                F+S GLSL LQ          + ++ R GE FE  + R+S   ED+   ESRS S
Sbjct: 51  -----FSSSGLSLGLQT---------NGEMSRNGEIFESNVTRKSSRGEDV---ESRSES 93

Query: 116 DNMDGASGDDLDAADNP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           DN +  SGDDLD +D P  +KKRYHRHTP+QIQ+LES+FKEC HPDEKQRL+LS+RL L+
Sbjct: 94  DNAEAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLD 153

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENMS+R+AMRNP+C NCGGPA+IG
Sbjct: 154 PRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIG 213

Query: 235 DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGG 294
           +IS+EEQHLRIEN+RLKDELDRVCAL GKFLGR   S G   +P+S+L LGVG     GG
Sbjct: 214 EISMEEQHLRIENSRLKDELDRVCALTGKFLGR---SNGSHHIPDSALVLGVGVGCNVGG 270

Query: 295 LSSTVTTTLP-ADFGTGISNAL--PVVMPPNRSGP-GVTGLDRSIERSMFLELALAAMDE 350
             +  +  LP A     ISNA    +V   NR  P  V+  D   +RS +L+LALA+MDE
Sbjct: 271 GFTLSSPVLPQASPRFEISNATGSGLVATVNRQQPVSVSDFD---QRSRYLDLALASMDE 327

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           LVKMAQT +PLW+RS + +G ++LN EEY  +FT C+G KP+G+V+EAS+E G VIINSL
Sbjct: 328 LVKMAQTRDPLWVRSSD-TGFEMLNQEEYDTSFTRCVGPKPDGYVSEASKEAGTVIINSL 386

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
           ALVETLMD  RWAEMFP MI+RT+TT++ISSGMGG+RNGAL LMHAELQ+LSPLVPVR+V
Sbjct: 387 ALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGSRNGALHLMHAELQLLSPLVPVRQV 446

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           +FLRFCKQHAEGVWAVVDVSID+IRE S +    +CRRLPSGC+VQDM NG SKVTW+EH
Sbjct: 447 SFLRFCKQHAEGVWAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGCSKVTWIEH 502

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            EYDE+++H+LY+PL+  G+ FGA RW+A LQRQCECL ILMS++VS
Sbjct: 503 TEYDENRIHRLYRPLLSCGLAFGAHRWMAALQRQCECLTILMSSTVS 549


>gi|3925363|gb|AAC79430.1| homeodomain protein [Malus x domestica]
          Length = 653

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/401 (80%), Positives = 362/401 (90%), Gaps = 9/401 (2%)

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           Q+KTQLE HENSLLRQEN+KLRAENMSIR+AMRNPIC+NCGGPAIIGDISLEEQHLRIEN
Sbjct: 1   QIKTQLEPHENSLLRQENNKLRAENMSIREAMRNPICSNCGGPAIIGDISLEEQHLRIEN 60

Query: 248 ARLKDELDRVCALAGKFLGRPVSSMGP---PPMPNSSLELGVGTINGFGGLSSTVTT-TL 303
           ARLKD+LDRVCALAGKFLGRP+SS+G    PP+P+S+LELGVG+ NGFGG+S+  T+ ++
Sbjct: 61  ARLKDDLDRVCALAGKFLGRPISSLGASMGPPLPSSTLELGVGS-NGFGGMSNVATSMSM 119

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 363
             DFG GI +A+ VV   +   P VTGLDRS+ERS+FLELALAAMDELVKMAQTDEPLW+
Sbjct: 120 GNDFGGGIGSAMSVV---SHGRPSVTGLDRSMERSIFLELALAAMDELVKMAQTDEPLWL 176

Query: 364 RSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWA 423
           RS EG GR+VLNHEEY+R FTPCIGLKPNGFV+EASRE+G VIINSL LVETLMD NRW 
Sbjct: 177 RSLEG-GREVLNHEEYMRNFTPCIGLKPNGFVSEASRESGTVIINSLTLVETLMDSNRWL 235

Query: 424 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 483
           EMFP ++ART+TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV
Sbjct: 236 EMFPGVLARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 295

Query: 484 WAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYK 543
           WAVVDVS+D IR+T+G P F+NCR LPSGCVVQDMPNGYSKVTWVEHAEYDESQVH LY+
Sbjct: 296 WAVVDVSVDAIRDTTGVPTFMNCRTLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHHLYR 355

Query: 544 PLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           PL+ SGMGFGAQRWV+TLQRQ EC AILMS+ V++RDHT I
Sbjct: 356 PLLSSGMGFGAQRWVSTLQRQSECQAILMSSCVTSRDHTAI 396


>gi|5050910|emb|CAB45018.1| homeodomain GLABRA2 like 1 protein [Arabidopsis thaliana]
          Length = 808

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/589 (60%), Positives = 434/589 (73%), Gaps = 53/589 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           M+F GFL++      G G +++++D  Y     NN+ +     T+    L S+   P   
Sbjct: 1   MNFNGFLDD------GAGASKLLSDAPY-----NNHFSFSAVDTM----LGSAAIAPSQS 45

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSR--EDLLEHESRSGSDNM 118
             F+S GLSL LQ          + ++ R GE  E  + R+S   ED+   ESRS SDN 
Sbjct: 46  LPFSSSGLSLGLQT---------NGEMSRNGEIMESNVSRKSSRGEDV---ESRSESDNA 93

Query: 119 DGASGDDLDAADNP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           +  SGDDLD +D P  +KKRYHRHTP+QIQ+LES+FKEC HPDEKQRL+LS+RL L+ RQ
Sbjct: 94  EAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQ 153

Query: 178 VKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS 237
           VKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENMS+R+AMRNP+C NCGGPA+IG+IS
Sbjct: 154 VKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEIS 213

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSS 297
           +EEQHLRIEN+RLKDELDRVCAL GKFLGR   S G   +P+S+L LGVG  +G   +  
Sbjct: 214 MEEQHLRIENSRLKDELDRVCALTGKFLGR---SNGSHHIPDSALVLGVGVGSGGCNVGG 270

Query: 298 TVTTTLPA--------DFGTGISNALPVVMPPNRSGP-GVTGLDRSIERSMFLELALAAM 348
             T + P         +   G  + L  V   NR  P  V+  D   +RS +L+LALAAM
Sbjct: 271 GFTLSSPLLPQASPRFEISNGTGSGL--VATVNRQQPVSVSDFD---QRSRYLDLALAAM 325

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIIN 408
           DELVKMAQT EPLW+RS + SG +VLN EEY  +F+ C+G K +GFV+EAS+E G VIIN
Sbjct: 326 DELVKMAQTREPLWVRSSD-SGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIIN 384

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVR 468
           SLALVETLMD  RWAEMFP M++RT+TT++ISSGMGG RNGAL LMHAELQ+LSPLVPVR
Sbjct: 385 SLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGG-RNGALHLMHAELQLLSPLVPVR 443

Query: 469 EVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
           +V+FLRFCKQHAEGVWAVVDVSID+IRE S +    +CRRLPSGC+VQDM NGYSKVTW+
Sbjct: 444 QVSFLRFCKQHAEGVWAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWI 499

Query: 529 EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           EH EYDE+ +H+LY+PL+  G+ FGA RW+A LQRQCECL ILMS++VS
Sbjct: 500 EHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVS 548


>gi|15233048|ref|NP_191674.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
 gi|75335834|sp|Q9M2E8.1|HDG1_ARATH RecName: Full=Homeobox-leucine zipper protein HDG1; AltName:
           Full=HD-ZIP protein HDG1; AltName: Full=Homeodomain
           GLABRA 2-like protein 1; AltName: Full=Homeodomain
           transcription factor HDG1; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 1
 gi|6850882|emb|CAB71045.1| homeobox protein [Arabidopsis thaliana]
 gi|15292865|gb|AAK92803.1| putative homeobox protein [Arabidopsis thaliana]
 gi|20465805|gb|AAM20391.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332646640|gb|AEE80161.1| homeobox-leucine zipper protein HDG1 [Arabidopsis thaliana]
          Length = 808

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/589 (60%), Positives = 434/589 (73%), Gaps = 53/589 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           M+F GFL++      G G +++++D  Y     NN+ +     T+    L S+   P   
Sbjct: 1   MNFNGFLDD------GAGASKLLSDAPY-----NNHFSFSAVDTM----LGSAAIAPSQS 45

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSR--EDLLEHESRSGSDNM 118
             F+S GLSL LQ          + ++ R GE  E  + R+S   ED+   ESRS SDN 
Sbjct: 46  LPFSSSGLSLGLQT---------NGEMSRNGEIMESNVSRKSSRGEDV---ESRSESDNA 93

Query: 119 DGASGDDLDAADNP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           +  SGDDLD +D P  +KKRYHRHTP+QIQ+LES+FKEC HPDEKQRL+LS+RL L+ RQ
Sbjct: 94  EAVSGDDLDTSDRPLKKKKRYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQ 153

Query: 178 VKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS 237
           VKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENMS+R+AMRNP+C NCGGPA+IG+IS
Sbjct: 154 VKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEIS 213

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSS 297
           +EEQHLRIEN+RLKDELDRVCAL GKFLGR   S G   +P+S+L LGVG  +G   +  
Sbjct: 214 MEEQHLRIENSRLKDELDRVCALTGKFLGR---SNGSHHIPDSALVLGVGVGSGGCNVGG 270

Query: 298 TVTTTLPA--------DFGTGISNALPVVMPPNRSGP-GVTGLDRSIERSMFLELALAAM 348
             T + P         +   G  + L  V   NR  P  V+  D   +RS +L+LALAAM
Sbjct: 271 GFTLSSPLLPQASPRFEISNGTGSGL--VATVNRQQPVSVSDFD---QRSRYLDLALAAM 325

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIIN 408
           DELVKMAQT EPLW+RS + SG +VLN EEY  +F+ C+G K +GFV+EAS+E G VIIN
Sbjct: 326 DELVKMAQTREPLWVRSSD-SGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIIN 384

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVR 468
           SLALVETLMD  RWAEMFP M++RT+TT++ISSGMGG RNGAL LMHAELQ+LSPLVPVR
Sbjct: 385 SLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGG-RNGALHLMHAELQLLSPLVPVR 443

Query: 469 EVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
           +V+FLRFCKQHAEGVWAVVDVSID+IRE S +    +CRRLPSGC+VQDM NGYSKVTW+
Sbjct: 444 QVSFLRFCKQHAEGVWAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWI 499

Query: 529 EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           EH EYDE+ +H+LY+PL+  G+ FGA RW+A LQRQCECL ILMS++VS
Sbjct: 500 EHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVS 548


>gi|255539515|ref|XP_002510822.1| homeobox protein, putative [Ricinus communis]
 gi|223549937|gb|EEF51424.1| homeobox protein, putative [Ricinus communis]
          Length = 799

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/556 (59%), Positives = 409/556 (73%), Gaps = 25/556 (4%)

Query: 31  NDNNNNNNMPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRM 90
           N  +   ++  +  +A P L  + P+        SP LSL+++   +DN G  D+ L  +
Sbjct: 10  NSVDTGGDIMHSDAIAKPLLTPTVPK--------SPALSLSIKGKKMDNHG--DMGL--L 57

Query: 91  GESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAA-DNPPRKKRYHRHTPQQIQEL 149
           GE F+  +  R +ED   +ESRSGSDN++GASGDD +A  D  PRKK+YHRHTP QIQEL
Sbjct: 58  GEHFDPSLVGRLKED--GYESRSGSDNLEGASGDDQEAGEDQRPRKKKYHRHTPLQIQEL 115

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 209
           E  FKECPHPDEKQRLELS+RL LE++Q+KFWFQNRRTQMKTQLERHEN +LRQENDKLR
Sbjct: 116 EVCFKECPHPDEKQRLELSRRLGLESKQIKFWFQNRRTQMKTQLERHENIILRQENDKLR 175

Query: 210 AENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV 269
           AEN  +   M +P+C  CGGP + G +S ++Q LRIENARLKDEL RVCALA KFLGRP+
Sbjct: 176 AENELLSQNMTDPMCNGCGGPVVPGPVSFDQQQLRIENARLKDELGRVCALANKFLGRPL 235

Query: 270 SSMG---PPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGP 326
           SS     PP   NS LEL VG  NG+G L +  +T     F  G+     + MP  +   
Sbjct: 236 SSSANPIPPFGSNSKLELAVGR-NGYGDLGNVEST-----FQMGLDYNDAITMPLMKQLT 289

Query: 327 GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPC 386
           G    +   +RSM ++LA+AAMDELVK+AQ D PLWI+S +G G+  LN+EEY+RTF+PC
Sbjct: 290 GPMVSEVPYDRSMMIDLAVAAMDELVKIAQIDNPLWIKSLDG-GKDTLNYEEYMRTFSPC 348

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
           IG+KPN F+ EA+R+TG+VIIN LALVE LMD NRW E FP +IAR +T DVISSGM GT
Sbjct: 349 IGMKPNSFIPEATRDTGIVIINILALVEILMDVNRWLEAFPSLIARASTIDVISSGMAGT 408

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
           +NGALQ+M+AE QV+SPLVPVR+V FLRFCKQH+EGVW VVDVSID   E+S A  F  C
Sbjct: 409 KNGALQVMNAEFQVVSPLVPVRQVRFLRFCKQHSEGVWVVVDVSIDANLESSNAHPFAAC 468

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RRLPSGC++Q+MPNG SKVTWVEH+EYDES VHQLY+ ++ SG GFGAQRWVATLQR CE
Sbjct: 469 RRLPSGCILQEMPNGCSKVTWVEHSEYDESAVHQLYRSILSSGKGFGAQRWVATLQRYCE 528

Query: 567 CLAILMSTSVSARDHT 582
           C+ ILMS ++S  D T
Sbjct: 529 CMTILMSPTISGEDQT 544


>gi|162462506|ref|NP_001105125.1| outer cell layer3 [Zea mays]
 gi|8920423|emb|CAB96423.1| OCL3 protein [Zea mays]
          Length = 863

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/617 (57%), Positives = 431/617 (69%), Gaps = 54/617 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +        G G+ +    SY         + P        RL+ + P P   
Sbjct: 1   MSFGGMFD--------GAGSGV---FSYDATGGGTGMHNPG-------RLVPAPPLP-KP 41

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR------RSREDLLEHESRSG 114
             F + GLSL LQ  N++    GDL    +        G       R RED  E +SRSG
Sbjct: 42  GGFGATGLSLGLQT-NMEGAQLGDLGRMGLIGGGGSGSGGDGDSLGRGRED--EIDSRSG 98

Query: 115 SDNMDGASGDDLDAADNPPR--KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SDN+DGASGD++D  ++ PR  KKRYHRHTPQQIQELE++FKECPHPDEKQR+ELSKRL 
Sbjct: 99  SDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRLN 158

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNPIC NCGG A+
Sbjct: 159 LESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPICANCGGAAV 218

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP---NSSLELGVGTI 289
           +G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS           S LELGVG+ 
Sbjct: 219 LGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSSMSSSLQGCSGLELGVGSN 278

Query: 290 NGF--GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS--------IERSM 339
           NG+  G L ++    LP   G G+    PV     R   G+  LD +        I+R++
Sbjct: 279 NGYGLGPLGASALQPLPDLLGAGLPG--PVGSAAMRLPMGIGALDVALHGAAADGIDRTV 336

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 399
            LELALAAM+EL+K+AQ DEPLW+RS +GSG + LN +EY R F    G  P G+VTEA+
Sbjct: 337 LLELALAAMEELMKVAQMDEPLWLRSPDGSGLEALNLDEYHRAFARVFGPSPAGYVTEAT 396

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQ 459
           RE G+ I +S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLMHAELQ
Sbjct: 397 REAGVAITSSVDLVDSLMDAARWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMHAELQ 456

Query: 460 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---------RETSGAPAFVNCRRLP 510
           VLSPLVP+REV FLRFCKQHA+G+WAVVDVS+D I          +  G   ++ CR LP
Sbjct: 457 VLSPLVPIREVVFLRFCKQHAKGLWAVVDVSVDAILRPDGGHHHAQNGGGAGYMGCRLLP 516

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           +GC+VQDM NGYSKVTWV HAEYDE+ VHQLY+PL+ SG   GA+RW+A+LQRQC+ LAI
Sbjct: 517 TGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWLASLQRQCQYLAI 576

Query: 571 LMSTSVSARDHTGIYDI 587
           L S S+ ARDH  I  +
Sbjct: 577 LCSNSLPARDHAAITPV 593


>gi|345193173|tpg|DAA34952.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414886368|tpg|DAA62382.1| TPA: outer cell layer3 [Zea mays]
          Length = 863

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/617 (57%), Positives = 430/617 (69%), Gaps = 54/617 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +        G G+ +    SY         + P        RL+ + P P   
Sbjct: 1   MSFGGMFD--------GAGSGV---FSYDATGGGTGMHNPG-------RLVPAPPLP-KP 41

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR------RSREDLLEHESRSG 114
             F + GLSL LQ  N++    GDL    +        G       R RED  E +SRSG
Sbjct: 42  GGFGATGLSLGLQT-NMEGAQLGDLGRMGLIGGGGSGSGGDGDSLGRGRED--EIDSRSG 98

Query: 115 SDNMDGASGDDLDAADNPPR--KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SDN+DGASGD++D  ++ PR  KKRYHRHTPQQIQELE++FKECPHPDEKQR+ELSKRL 
Sbjct: 99  SDNVDGASGDEIDPDNSNPRRKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSKRLN 158

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNPIC NCGG A+
Sbjct: 159 LESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPICANCGGAAV 218

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP---NSSLELGVGTI 289
           +G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS           S LEL VG+ 
Sbjct: 219 LGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSSMSSSLQGCSGLELAVGSN 278

Query: 290 NGF--GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS--------IERSM 339
           NG+  G L ++    LP   G G+    PV     R   G+  LD +        I+R++
Sbjct: 279 NGYGPGPLGASALQPLPDLLGAGLPG--PVGSAAMRLPMGIGALDVALHGAAADGIDRTV 336

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 399
            LELALAAM+EL+K+AQ DEPLW+RS +GSG + LN +EY R F    G  P G+VTEA+
Sbjct: 337 LLELALAAMEELMKVAQMDEPLWLRSPDGSGLEALNLDEYHRAFARVFGPSPAGYVTEAT 396

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQ 459
           RE G+ I +S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLMHAELQ
Sbjct: 397 REAGVAITSSVDLVDSLMDAARWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMHAELQ 456

Query: 460 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---------RETSGAPAFVNCRRLP 510
           VLSPLVP+REV FLRFCKQHAEG+WAVVDVS+D I          +  G   ++ CR LP
Sbjct: 457 VLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGHHHAQNGGGAGYMGCRLLP 516

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           +GC+VQDM NGYSKVTWV HAEYDE+ VHQLY+PL+ SG   GA+RW+A+LQRQC+ LAI
Sbjct: 517 TGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALGARRWLASLQRQCQYLAI 576

Query: 571 LMSTSVSARDHTGIYDI 587
           L S S+ ARDH  I  +
Sbjct: 577 LCSNSLPARDHAAITPV 593


>gi|242049914|ref|XP_002462701.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
 gi|241926078|gb|EER99222.1| hypothetical protein SORBIDRAFT_02g030470 [Sorghum bicolor]
          Length = 872

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/634 (56%), Positives = 438/634 (69%), Gaps = 81/634 (12%)

Query: 1   MSFGGFLENNIST------SSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHP-RLLSS 53
           MSFGG  +    +      ++GGGG                       T + +P RL+ +
Sbjct: 1   MSFGGMFDGAAGSGVFSYDATGGGG-----------------------TGMHNPSRLIPA 37

Query: 54  TPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMG---------ESFEGIIGRRSRE 104
            P P     F + GLSL LQ    + +GG    L RMG               +GR   E
Sbjct: 38  PPLP-KPGGFGATGLSLGLQ---TNMEGGQLADLSRMGLIGSGGSASGGDGDSLGRARGE 93

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEK 162
           D  E++SRSGSDN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEK
Sbjct: 94  D--ENDSRSGSDNVDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEK 151

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 222
           QR+ELSKRL LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNP
Sbjct: 152 QRMELSKRLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNP 211

Query: 223 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN-SS 281
           ICTNCGG A++G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS     +   S 
Sbjct: 212 ICTNCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSGSSMSLQGCSG 271

Query: 282 LELGVGTINGF--GGLSSTVTTTLPADFGTG-----ISNALPVVMPPNRSGPGVTGLDRS 334
           LELGVGT  GF  G L ++    LP   G G     + +A  + +P      G+  LD +
Sbjct: 272 LELGVGTNGGFGLGPLGASALQPLPDLMGAGGLPGPVGSAAAMRLP-----VGIGALDGA 326

Query: 335 -------IERSMFLELALAAMDELVKMAQTDEPLWIRSFE-GSGRQVLNHEEYLRTFTPC 386
                  I+R++ LEL LAAM+EL+K+AQ DEPLW+RS + G G + LN +EY R F   
Sbjct: 327 MHGAADGIDRTVLLELGLAAMEELMKVAQMDEPLWLRSPDGGGGLETLNFDEYHRAFARV 386

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
            G  P G+V+EA+RE G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGT
Sbjct: 387 FGPSPAGYVSEATREAGIAIISSVDLVDSLMDAARWSEMFPCIVARASTTDIISSGMGGT 446

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------------ 494
           R+G++QLMHAELQVLSPLVP+REV FLRFCKQHAEG+WAVVDVS+D I            
Sbjct: 447 RSGSIQLMHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAILRPDGGGNHHHH 506

Query: 495 -RETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
                GA  ++ CR LP+GC+VQDM NGYSKVTWV HAEYDE+ VHQLY+PL+ SG   G
Sbjct: 507 HAHNGGAAGYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDEAVVHQLYRPLLQSGQALG 566

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGIYDI 587
           A+RW+A+LQRQC+ LAIL S S+ ARDH  I  +
Sbjct: 567 ARRWLASLQRQCQYLAILCSNSLPARDHAAITPV 600


>gi|326490099|dbj|BAJ94123.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/502 (62%), Positives = 386/502 (76%), Gaps = 23/502 (4%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASG---DDLDA---ADNP-PRKKRYHRHTPQQIQELES 151
           G  +R+   +++SRSGSD++D  SG   DD DA     NP  RKKRYHRHTPQQIQELE+
Sbjct: 52  GAMARDAEAQNDSRSGSDHLDAISGVGDDDDDAEPSGSNPRKRKKRYHRHTPQQIQELEA 111

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAE 211
           LFKECPHPDEKQR ELSKRL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QEN+KLR E
Sbjct: 112 LFKECPHPDEKQRGELSKRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENEKLRTE 171

Query: 212 NMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS 271
           N++IR+AMR P+C  CG PA++G++SLEEQHLRIENARLKDEL+RVC LA KFLG+PVS 
Sbjct: 172 NLTIREAMRTPMCGGCGSPAMLGEVSLEEQHLRIENARLKDELNRVCTLATKFLGKPVSL 231

Query: 272 MGP--------PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNR 323
           + P         P+PNSSLEL VG I G G + S++   + +++  G S+++  V+ P R
Sbjct: 232 LSPLQLQPHLSMPLPNSSLELAVGGIGGIGSMQSSMHGMM-SEYAGGASSSMGTVITPAR 290

Query: 324 SGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG-SGRQVLNHEEYLRT 382
           +          I+RS+FLELA++AMDELVKMAQTD+P W+    G   ++ LN EEYL +
Sbjct: 291 ATGSALASMVDIDRSVFLELAISAMDELVKMAQTDDPFWVTGLPGFPDKESLNFEEYLHS 350

Query: 383 FTPCIGLKPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISS 441
              CIG+KP GFV+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + +S+
Sbjct: 351 SQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATILEEVSN 410

Query: 442 GMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI-----RE 496
           G+GGTRNGAL LM AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID +       
Sbjct: 411 GIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLLSNQNSA 470

Query: 497 TSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQR 556
           T+ A A + CRRLPSGCV+QD PNGY KVTWVEH EYDE+ VHQ Y+PL+ SG+ FGA R
Sbjct: 471 TTSAGANLKCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASR 530

Query: 557 WVATLQRQCECLAILMSTSVSA 578
           W+ATLQRQCECLAILMS++ ++
Sbjct: 531 WLATLQRQCECLAILMSSATAS 552


>gi|357136990|ref|XP_003570085.1| PREDICTED: homeobox-leucine zipper protein ROC5-like [Brachypodium
           distachyon]
          Length = 791

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 326/537 (60%), Positives = 397/537 (73%), Gaps = 35/537 (6%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSD 116
           P      +SP LSLAL     DN GG        G  F    G  + +   +++SRSGSD
Sbjct: 18  PYPGGFSSSPALSLAL-----DNAGGIG------GRMFAD--GAMAGDAEAQNDSRSGSD 64

Query: 117 NMDGASG---DDLDAADNPPRK--KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           ++D  SG   DD DA  + PRK  KRYHRHTPQQIQELE+LFKECPHPDEKQR ELS+RL
Sbjct: 65  HLDAISGVGDDDDDAEPSNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSRRL 124

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
            L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C  CG PA
Sbjct: 125 SLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGGCGSPA 184

Query: 232 IIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP--------MPNSSLE 283
           ++G++SLEEQHLRIENARLKDEL+RVCALA KFLG+PVS M P          +PNSSLE
Sbjct: 185 MLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPVSLMSPLQLQPHLSMHLPNSSLE 244

Query: 284 LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
           L VG + G G +  T+  T+ ++F  G S+++  V+ P R+          I+RSMFLEL
Sbjct: 245 LAVGGMGGIGSMQPTLHGTM-SEFAGGASSSMGTVITPARATGSAIASITDIDRSMFLEL 303

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           A++AMDEL+KMAQ D+PLW+    GS  ++ LN EEY  +F P IG+KP GFV+EASRE+
Sbjct: 304 AISAMDELIKMAQVDDPLWVTGLPGSPNKETLNFEEY-HSFLPGIGMKPAGFVSEASRES 362

Query: 403 GMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
           G+VII NS+ALVETLMD  RW++MF CMIA+    + +S+G+ G+RNG+L LM AELQVL
Sbjct: 363 GLVIIDNSVALVETLMDERRWSDMFSCMIAKATILEEVSTGIAGSRNGSLLLMKAELQVL 422

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI-----RETSGAPAFVNCRRLPSGCVVQ 516
           SPLVP+REV FLRFCKQ AEG WAVVDVSID +       T+   A + CRRLPSGCV+Q
Sbjct: 423 SPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLMRDQNSATTSTAANLKCRRLPSGCVMQ 482

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           D P+G+ KVTWVEH EYDE+ VHQ Y+PL+ SG+ FGA RW+ATLQRQCECLAILMS
Sbjct: 483 DTPSGFCKVTWVEHTEYDEASVHQFYRPLLRSGLAFGASRWLATLQRQCECLAILMS 539


>gi|357159529|ref|XP_003578475.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 1
           [Brachypodium distachyon]
          Length = 864

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/543 (59%), Positives = 406/543 (74%), Gaps = 44/543 (8%)

Query: 70  LALQQPNIDNQGGGDL--QLQRM-------GESFEGIIGRRSREDLLEHESRSGSDNMDG 120
           L LQQ N+  + GG L     RM       G   +G    R RED  E++SRSGSDN+DG
Sbjct: 53  LGLQQTNMSMESGGPLAGDANRMVGLMGSSGSGGDGDSLGRGRED--ENDSRSGSDNLDG 110

Query: 121 ASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           ASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL LE+RQV
Sbjct: 111 ASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQV 170

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMR+PIC NCGG A++G++SL
Sbjct: 171 KFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRSPICGNCGGAAVLGEVSL 230

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGL--- 295
           EEQHLRIEN+RLKDELDRVC+LAGKFLGRP+S++       S LE G+G  NGFG L   
Sbjct: 231 EEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI------TSGLEFGIGATNGFGALGPL 284

Query: 296 ---SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDR-----SIERSMFLELALAA 347
              SS+V  ++P   G   S+A  + +P      G++GLD      +++R + LEL LAA
Sbjct: 285 GGSSSSVLQSIPDLMGG--SSAAAMRLP-----AGISGLDDAESAIAVDRGVLLELGLAA 337

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
           MDELVK+ Q D+PLW+ S + SG + LN++EY R F   +   P GFV+EA+RE G+ I+
Sbjct: 338 MDELVKVTQVDDPLWLPSLD-SGFETLNNDEYRRAFPRVLAHSPAGFVSEATREVGLAIV 396

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           +S  LV++LMD  RWAEMFPC++AR +TTD+IS GM GTR+G++QLMHAELQVLSPLVP+
Sbjct: 397 SSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAELQVLSPLVPI 456

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVNCRRLPSGCVVQDMPNG 521
           REV FLRFCKQHAEG+WAVVDVS D +           A  ++ CR LPSGCVV+DM NG
Sbjct: 457 REVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPSGCVVEDMRNG 516

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
           Y+KVTWV HAEYDE+ VH LY+PL+ SG   GA+RW+A+LQRQC+ LAIL + S+ ++D+
Sbjct: 517 YAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLAILRNNSLPSQDN 576

Query: 582 TGI 584
             I
Sbjct: 577 QAI 579


>gi|449485525|ref|XP_004157198.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 325/511 (63%), Positives = 398/511 (77%), Gaps = 19/511 (3%)

Query: 81  GGGDLQLQRMGESFE--GIIGRRSREDLLEHESRSGSDNMDGA-SGDDLDAAD-NPPRKK 136
           G G++ L  +G+ F+  GI+  R RED  E++SRSGSDN+DGA SGDD DA D  PP++K
Sbjct: 35  GYGEVCL--LGDGFDPTGIV--RIRED--EYDSRSGSDNIDGAVSGDDHDANDEQPPKRK 88

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 196
           +YHRHTP QIQELE  FKECPHPD+KQR ELS+RL LET+QVKFWFQNRRTQMKTQ+ERH
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRLGLETKQVKFWFQNRRTQMKTQIERH 148

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 256
           EN++L+QENDKLRAEN  ++DA+ NP C+ CGGP+I   +S EE  LRIENARL++EL R
Sbjct: 149 ENAILKQENDKLRAENSVMKDAISNPTCSTCGGPSIPVHLSFEEHQLRIENARLREELHR 208

Query: 257 VCALAGKFLGRPV---SSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
           + A+  KFLG PV   ++ G  P  +S LEL VG  NG G LS TV+ ++  + G  + +
Sbjct: 209 LYAVTNKFLGWPVVPFANHGSSPSSDSCLELSVGR-NGPGNLS-TVSDSMGLNLGNELFS 266

Query: 314 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 373
           A   VMP ++   G+   D  +ER+++++LALAAM+ELVKMAQ D PLWIRS   SG++ 
Sbjct: 267 A-GSVMPISKPDIGMLTNDIPLERTIYVDLALAAMNELVKMAQMDGPLWIRSRADSGKET 325

Query: 374 LNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           LN +EY RTF    G+K   + TEA+R+T MVIINSLALVETLMD NRWAEMFPC+IAR 
Sbjct: 326 LNLDEYSRTFPSSAGMKHTNWTTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARA 385

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
            TTDVISSGMGGTRNGALQLMHAEL+VLSPLVPVR + FLRFCKQHA+G+WAVVDVSI  
Sbjct: 386 TTTDVISSGMGGTRNGALQLMHAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIG- 444

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
             E S + +F  C+RLPSGCVVQDMPNG+SKVTWVEH EYDE+ +HQLY+ LI SG GFG
Sbjct: 445 --EGSNSNSFSGCKRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFG 502

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           +QRW+ATLQRQC+CLAILMS+++   D  GI
Sbjct: 503 SQRWLATLQRQCDCLAILMSSTIPTEDPAGI 533


>gi|449446049|ref|XP_004140784.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Cucumis sativus]
          Length = 783

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 325/511 (63%), Positives = 398/511 (77%), Gaps = 19/511 (3%)

Query: 81  GGGDLQLQRMGESFE--GIIGRRSREDLLEHESRSGSDNMDGA-SGDDLDAAD-NPPRKK 136
           G G++ L  +G+ F+  GI+  R RED  E++SRSGSDN+DGA SGDD DA D  PP++K
Sbjct: 35  GYGEVCL--LGDGFDPTGIV--RIRED--EYDSRSGSDNIDGAVSGDDHDANDEQPPKRK 88

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 196
           +YHRHTP QIQELE  FKECPHPD+KQR ELS+RL LET+QVKFWFQNRRTQMKTQ+ERH
Sbjct: 89  KYHRHTPHQIQELEIFFKECPHPDDKQRNELSRRLGLETKQVKFWFQNRRTQMKTQIERH 148

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 256
           EN++L+QENDKLRAEN  ++DA+ NP C+ CGGP+I   +S EE  LRIENARL++EL R
Sbjct: 149 ENAILKQENDKLRAENSVMKDAISNPTCSTCGGPSIPVHLSFEEHQLRIENARLREELHR 208

Query: 257 VCALAGKFLGRPV---SSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
           + A+  KFLG PV   ++ G  P  +S LEL VG  NG G LS TV+ ++  + G  + +
Sbjct: 209 LYAVTNKFLGWPVVPFANHGSSPSSDSCLELSVGR-NGPGNLS-TVSDSMGLNLGNELFS 266

Query: 314 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 373
           A   VMP ++   G+   D  +ER+++++LALAAM+ELVKMAQ D PLWIRS   SG++ 
Sbjct: 267 A-GSVMPISKPDIGMLTNDIPLERTIYVDLALAAMNELVKMAQMDGPLWIRSRADSGKET 325

Query: 374 LNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           LN +EY RTF    G+K   + TEA+R+T MVIINSLALVETLMD NRWAEMFPC+IAR 
Sbjct: 326 LNLDEYSRTFPSSAGMKHTNWTTEATRDTTMVIINSLALVETLMDANRWAEMFPCLIARA 385

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
            TTDVISSGMGGTRNGALQLMHAEL+VLSPLVPVR + FLRFCKQHA+G+WAVVDVSI  
Sbjct: 386 TTTDVISSGMGGTRNGALQLMHAELRVLSPLVPVRTLKFLRFCKQHADGLWAVVDVSIG- 444

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
             E S + +F  C+RLPSGCVVQDMPNG+SKVTWVEH EYDE+ +HQLY+ LI SG GFG
Sbjct: 445 --EGSNSNSFSGCKRLPSGCVVQDMPNGFSKVTWVEHTEYDETVIHQLYRQLISSGSGFG 502

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           +QRW+ATLQRQC+CLAILMS+++   D  GI
Sbjct: 503 SQRWLATLQRQCDCLAILMSSTIPTEDPAGI 533


>gi|357444035|ref|XP_003592295.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355481343|gb|AES62546.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 842

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 324/510 (63%), Positives = 384/510 (75%), Gaps = 15/510 (2%)

Query: 83  GDLQLQRMGESFE-GIIGRRSREDLLEHESRSGSDNMD----GASGDDLDAADNPPRKKR 137
           G  ++   G+S + G++GR  RED  E+ESRSGSDN D         D        RKKR
Sbjct: 3   GQSEIGLTGDSLDTGLLGRM-RED--EYESRSGSDNFDLEGLSGDDQDGGDDGQRKRKKR 59

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHTP QIQELES FKECPHPDEKQRL+LSKRL LE +QVKFWFQNRRTQMKTQLERHE
Sbjct: 60  YHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHE 119

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRV 257
           N +LRQENDKLR EN  +++AM NPIC NCGGPAI G I  EE  +RIENARLKDEL+R+
Sbjct: 120 NIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKDELNRI 179

Query: 258 CALAGKFLGRPVSSMGPP---PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNA 314
           CAL  KFLG+P+SS+  P   P  NS LELG+G     G  SS++   LP     G   +
Sbjct: 180 CALTNKFLGKPISSLANPMALPTSNSGLELGIGRNGFGG-GSSSLGNPLPMGLDLGDGRS 238

Query: 315 LPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVL 374
           +P +  P   G   +  D  +ERS  ++LALAAMDEL+KMAQTD P+WI+  +G  R +L
Sbjct: 239 MPGISSP--MGLMGSSSDVQLERSALIDLALAAMDELLKMAQTDSPVWIKGLDGE-RDML 295

Query: 375 NHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTA 434
           N EEY R  + CIG KP GFVTEA+R+TG+VIINSLALVETLMD NR+A+MF  MIAR+A
Sbjct: 296 NQEEYARLISSCIGPKPAGFVTEATRDTGIVIINSLALVETLMDANRYADMFQSMIARSA 355

Query: 435 TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI 494
             DV+S G+GGTRNGA+ LMH E+Q+LSPLVPVR+V  LRFCKQHAEGVWAVVDVS++  
Sbjct: 356 NLDVLSGGIGGTRNGAIHLMHTEVQLLSPLVPVRQVRILRFCKQHAEGVWAVVDVSVEIG 415

Query: 495 RETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGA 554
            + S A  F++CRRLPSGC+VQDMPNGYSKVTW+EH EYDES VHQLY+PL+ISG GFGA
Sbjct: 416 HDPSNAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESIVHQLYRPLLISGFGFGA 475

Query: 555 QRWVATLQRQCECLAILMSTSVSARDHTGI 584
            RW+ATLQRQCE LAILMS+S+S  DHT +
Sbjct: 476 HRWIATLQRQCEGLAILMSSSISNDDHTAL 505


>gi|242056677|ref|XP_002457484.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
 gi|241929459|gb|EES02604.1| hypothetical protein SORBIDRAFT_03g008090 [Sorghum bicolor]
          Length = 815

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 335/573 (58%), Positives = 406/573 (70%), Gaps = 64/573 (11%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR---------------- 100
           P S    +SP LSL L     DN GGG            G++GR                
Sbjct: 22  PFSTGFSSSPALSLGL-----DNAGGG------------GMVGRMLPGGAGAGAAADGGG 64

Query: 101 --RSREDLLEHESRSGSDNMDGASG------DDLDAADNPPRKKRYHRHTPQQIQELESL 152
               R+   E++SRSGSD++D  S       DD +  +   RKKRYHRHTPQQIQELE+L
Sbjct: 65  MMMGRDADAENDSRSGSDHLDAMSAGGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEAL 124

Query: 153 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FKECPHPDEKQR ELSKRL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAEN
Sbjct: 125 FKECPHPDEKQRGELSKRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAEN 184

Query: 213 MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVS-- 270
           M+IR+AMR+P+C +CG PA++G++SLEEQHL IENARLKDEL RV ALA KFLG+P+S  
Sbjct: 185 MAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENARLKDELSRVYALATKFLGKPMSIL 244

Query: 271 ---SMGPP----PMPNSSLELGV-GTINGFGGLSSTVTTTLP---ADFGTGISNALPVVM 319
              +M  P    PMP+SSLEL V G + G G + S    T+P    DF  G+S+ L  V+
Sbjct: 245 SAGTMLQPNLSLPMPSSSLELAVGGGLRGLGSIPS--AATMPGSMGDFAGGVSSPLGTVI 302

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEE 378
            P R+          I+RSM LELA++AMDELVK+AQ DEPLW+ S  GS  +++LN EE
Sbjct: 303 TPARTTGSAPPPMVGIDRSMLLELAISAMDELVKLAQIDEPLWLPSLNGSPNKELLNFEE 362

Query: 379 YLRTFTPCIGLKPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTD 437
           Y  +F PC+G+KP G+V+EASRE+G+VI  NSLALVETLMD  RW++MF CMIA+    +
Sbjct: 363 YAHSFLPCVGVKPVGYVSEASRESGLVIFDNSLALVETLMDERRWSDMFSCMIAKATVLE 422

Query: 438 VISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRE 496
            ++SG+ G+RNG L LM AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+
Sbjct: 423 EVTSGIAGSRNGGLLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRD 482

Query: 497 TSGAPAF----VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
            + A A     + CRRLPSGCV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ F
Sbjct: 483 QNSATASNAGNIRCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAF 542

Query: 553 GAQRWVATLQRQCECLAILMS-TSVSARDHTGI 584
           GA+RW+A LQRQCECLAILMS  +VSA D + I
Sbjct: 543 GARRWLAMLQRQCECLAILMSPDTVSANDSSVI 575


>gi|357159535|ref|XP_003578477.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 3
           [Brachypodium distachyon]
          Length = 858

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 312/504 (61%), Positives = 391/504 (77%), Gaps = 36/504 (7%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPH 158
           R RED  E++SRSGSDN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPH
Sbjct: 86  RGRED--ENDSRSGSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPH 143

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK-TQLERHENSLLRQENDKLRAENMSIRD 217
           PDEKQR+ELS+RL LE+RQVKFWFQNRRTQMK TQ+ERHEN+LLRQENDKLRAENM+IR+
Sbjct: 144 PDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIRE 203

Query: 218 AMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPM 277
           AMR+PIC NCGG A++G++SLEEQHLRIEN+RLKDELDRVC+LAGKFLGRP+S++     
Sbjct: 204 AMRSPICGNCGGAAVLGEVSLEEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI----- 258

Query: 278 PNSSLELGVGTINGFGGL------SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
             S LE G+G  NGFG L      SS+V  ++P   G   S+A  + +P      G++GL
Sbjct: 259 -TSGLEFGIGATNGFGALGPLGGSSSSVLQSIPDLMGG--SSAAAMRLPA-----GISGL 310

Query: 332 DRS-----IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPC 386
           D +     ++R + LEL LAAMDELVK+ Q D+PLW+ S + SG + LN++EY R F   
Sbjct: 311 DDAESAIAVDRGVLLELGLAAMDELVKVTQVDDPLWLPSLD-SGFETLNNDEYRRAFPRV 369

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
           +   P GFV+EA+RE G+ I++S  LV++LMD  RWAEMFPC++AR +TTD+IS GM GT
Sbjct: 370 LAHSPAGFVSEATREVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGT 429

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGA 500
           R+G++QLMHAELQVLSPLVP+REV FLRFCKQHAEG+WAVVDVS D +           A
Sbjct: 430 RSGSIQLMHAELQVLSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAA 489

Query: 501 PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 560
             ++ CR LPSGCVV+DM NGY+KVTWV HAEYDE+ VH LY+PL+ SG   GA+RW+A+
Sbjct: 490 AGYMGCRLLPSGCVVEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLAS 549

Query: 561 LQRQCECLAILMSTSVSARDHTGI 584
           LQRQC+ LAIL + S+ ++D+  I
Sbjct: 550 LQRQCQYLAILRNNSLPSQDNQAI 573


>gi|67966273|emb|CAG38614.1| homeobox protein OCL1 [Zea mays]
          Length = 803

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 336/560 (60%), Positives = 413/560 (73%), Gaps = 51/560 (9%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRM----GESFEGIIGRRSREDLLEHESR 112
           P +    +SP LSL L     DN GGG   + RM    G   +G + R + +   E++SR
Sbjct: 23  PFTTGFSSSPALSLGL-----DNAGGG--MVGRMLPVGGAPADGGMARDAAD--AENDSR 73

Query: 113 SGSDNMD----GASGDDLDAAD--NP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           SGSD++D    GA  +D D A+  NP  RKKRYHRHTPQQIQELE+LFKECPHPDEKQR 
Sbjct: 74  SGSDHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRD 133

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELSKRL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C 
Sbjct: 134 ELSKRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCG 193

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP--------PM 277
           +CG PA++G++SLEEQHL IENARLKDEL+RV ALA KFLG+P+  +  P        PM
Sbjct: 194 SCGSPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPM 253

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG----PGVTGLDR 333
           P+SSLEL VG + G G + S        +F  G+S+ L  V+ P R+     P + G+D 
Sbjct: 254 PSSSLELAVGGLRGLGSIPSL------DEFAGGVSSPLGTVITPARATGSAPPPMVGVD- 306

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIG-LKP 391
              RSM LELA++AMDELVK+AQ DEPLW+ S  GS  +++LN EEY  +F+P +G +KP
Sbjct: 307 ---RSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKP 363

Query: 392 NGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
            G+V+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + ++SG+ G+RNGA
Sbjct: 364 VGYVSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGA 423

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRE----TSGAPAFVN 505
           L LM AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+    T+     + 
Sbjct: 424 LLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIR 483

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           CRRLPSGCV+QD PNGY KVTWVE+ EYDE+ VHQLY+PLI SG+ FGA+RW+A LQRQC
Sbjct: 484 CRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQC 543

Query: 566 ECLAILMS-TSVSARDHTGI 584
           ECLAILMS  +VSA D + I
Sbjct: 544 ECLAILMSPDTVSANDSSVI 563


>gi|162463494|ref|NP_001105493.1| outer cell layer1 [Zea mays]
 gi|5531484|emb|CAB51059.1| OCL1 homeobox protein [Zea mays]
          Length = 784

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 335/560 (59%), Positives = 413/560 (73%), Gaps = 51/560 (9%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRM----GESFEGIIGRRSREDLLEHESR 112
           P +    +SP LSL L     DN GGG   + RM    G   +G + R + +   E++SR
Sbjct: 4   PFTTGFSSSPALSLGL-----DNAGGG--MVGRMLPVGGAPADGGMARDAAD--AENDSR 54

Query: 113 SGSDNMD----GASGDDLDAAD--NP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           SGSD++D    GA  +D D A+  NP  RKKRYHRHTPQQIQELE+LFKECPHPDEKQR 
Sbjct: 55  SGSDHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRG 114

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELSKRL L+ RQVKFWFQNRRT+MKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C 
Sbjct: 115 ELSKRLGLDPRQVKFWFQNRRTRMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCG 174

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP--------PM 277
           +CG PA++G++SLEEQHL IENARLKDEL+RV ALA KFLG+P+  +  P        PM
Sbjct: 175 SCGSPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPM 234

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG----PGVTGLDR 333
           P+SSLEL VG + G G + S        +F  G+S+ L  V+ P R+     P + G+D 
Sbjct: 235 PSSSLELAVGGLRGLGSIPSL------DEFAGGVSSPLGTVITPARATGSAPPPMVGVD- 287

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIG-LKP 391
              RSM LELA++AMDELVK+AQ DEPLW+ S  GS  +++LN EEY  +F+P +G +KP
Sbjct: 288 ---RSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKP 344

Query: 392 NGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
            G+V+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + ++SG+ G+RNGA
Sbjct: 345 VGYVSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGA 404

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRE----TSGAPAFVN 505
           L LM AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+    T+     + 
Sbjct: 405 LLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIR 464

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           CRRLPSGCV+QD PNGY KVTWVE+ EYDE+ VHQLY+PLI SG+ FGA+RW+A LQRQC
Sbjct: 465 CRRLPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQC 524

Query: 566 ECLAILMS-TSVSARDHTGI 584
           ECLAILMS  +VSA D + I
Sbjct: 525 ECLAILMSPDTVSANDSSVI 544


>gi|115447877|ref|NP_001047718.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|75121322|sp|Q6EPF0.1|ROC5_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC5; AltName:
           Full=GLABRA 2-like homeobox protein 5; AltName:
           Full=HD-ZIP protein ROC5; AltName: Full=Homeodomain
           transcription factor ROC5; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 5
 gi|50253214|dbj|BAD29470.1| GL2-type homeobox genes [Oryza sativa Japonica Group]
 gi|113537249|dbj|BAF09632.1| Os02g0674800 [Oryza sativa Japonica Group]
 gi|222623431|gb|EEE57563.1| hypothetical protein OsJ_07908 [Oryza sativa Japonica Group]
          Length = 804

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 334/553 (60%), Positives = 410/553 (74%), Gaps = 31/553 (5%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSD 116
           P +    +SP LSLAL        G         G S  G +   +R+   E++SRSGSD
Sbjct: 18  PFASGFASSPALSLALDNAGGGIGGRMLGGGAGAGSSAGGAM---TRDTEAENDSRSGSD 74

Query: 117 NMDG--ASGDDLDAADNPP-----RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           ++D   A+G+D D  D  P     RKKRYHRHTPQQIQELE+LFKECPHPDEKQR ELS+
Sbjct: 75  HLDAISAAGED-DVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSR 133

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG 
Sbjct: 134 RLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGS 193

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---------PVSSMGPPPMPNS 280
           PA++G++SLEEQHLRIENARLKDEL+RVCALA KFLG+          +      PMPNS
Sbjct: 194 PAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNS 253

Query: 281 SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNR-SGPGVTGLDRSIERSM 339
           SLEL +G I G G L +        +F  G+S+ +  V+ P R +G  +  L  +I+RS+
Sbjct: 254 SLELAIGGIGGLGSLGTLPGCM--NEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSV 311

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
           FLELA++AMDELVKMAQ D+PLW+ +  GS  ++VLN EEYL +F PCIG+KP G+V+EA
Sbjct: 312 FLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEA 371

Query: 399 SRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           SRE+G+VII NSLALVETLMD  RW++MF CMIA+    + +S+G+ G+RNGAL LM AE
Sbjct: 372 SRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAE 431

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRETSGAPA----FVNCRRLPSG 512
           LQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+ +   A     V CRR+PSG
Sbjct: 432 LQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSG 491

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           CV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ FGA+RW+ATLQRQCECLAILM
Sbjct: 492 CVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILM 551

Query: 573 ST-SVSARDHTGI 584
           S+ +V+A D T I
Sbjct: 552 SSATVTANDSTAI 564


>gi|218191344|gb|EEC73771.1| hypothetical protein OsI_08446 [Oryza sativa Indica Group]
          Length = 804

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 334/553 (60%), Positives = 410/553 (74%), Gaps = 31/553 (5%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSD 116
           P +    +SP LSLAL        G         G S  G +   +R+   E++SRSGSD
Sbjct: 18  PFASGFASSPALSLALDNAGGGIGGRMLGGGTGAGSSAGGAM---TRDTEAENDSRSGSD 74

Query: 117 NMDG--ASGDDLDAADNPP-----RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           ++D   A+G+D D  D  P     RKKRYHRHTPQQIQELE+LFKECPHPDEKQR ELS+
Sbjct: 75  HLDAISAAGED-DVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSR 133

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG 
Sbjct: 134 RLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGS 193

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---------PVSSMGPPPMPNS 280
           PA++G++SLEEQHLRIENARLKDEL+RVCALA KFLG+          +      PMPNS
Sbjct: 194 PAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNS 253

Query: 281 SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNR-SGPGVTGLDRSIERSM 339
           SLEL +G I G G L +        +F  G+S+ +  V+ P R +G  +  L  +I+RS+
Sbjct: 254 SLELAIGGIGGLGSLGTLPGCM--NEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSV 311

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
           FLELA++AMDELVKMAQ D+PLW+ +  GS  ++VLN EEYL +F PCIG+KP G+V+EA
Sbjct: 312 FLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEA 371

Query: 399 SRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           SRE+G+VII NSLALVETLMD  RW++MF CMIA+    + +S+G+ G+RNGAL LM AE
Sbjct: 372 SRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAE 431

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRETSGAPA----FVNCRRLPSG 512
           LQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+ +   A     V CRR+PSG
Sbjct: 432 LQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSG 491

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           CV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ FGA+RW+ATLQRQCECLAILM
Sbjct: 492 CVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILM 551

Query: 573 ST-SVSARDHTGI 584
           S+ +V+A D T I
Sbjct: 552 SSATVTANDSTAI 564


>gi|359490389|ref|XP_003634081.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Vitis vinifera]
          Length = 783

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 306/495 (61%), Positives = 388/495 (78%), Gaps = 25/495 (5%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLD--AADNPPRKKRYHRHTPQQIQEL 149
           E+F+  +  R  ED   +ES SGS N+DG   D+ +    + P +K +YHRHT +QI EL
Sbjct: 59  ENFDPSVMGRINED--GYESMSGSGNLDGGLEDEQETLVLERPAKKLKYHRHTQEQINEL 116

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 209
           E+ FKE PHPDEKQRL+LS++L LE RQVKFWFQNRRTQMK QLERHEN +LRQENDKLR
Sbjct: 117 ETCFKEWPHPDEKQRLDLSRKLNLEPRQVKFWFQNRRTQMKNQLERHENVMLRQENDKLR 176

Query: 210 AENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV 269
            EN++I+DA+RNPIC +CGG A++G+I++EE  LR+ENA+L+DEL R+C LA KFLGRPV
Sbjct: 177 VENVAIKDAVRNPICNHCGGVAMLGNITIEENQLRVENAQLRDELSRICGLAEKFLGRPV 236

Query: 270 SSMGPP---PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGP 326
           + +  P   P P+S+LEL V   NGFGGL+S  T               P+ M P  + P
Sbjct: 237 TPLASPIALPRPSSNLELEVAG-NGFGGLNSGGT---------------PLPMGP-LTRP 279

Query: 327 GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPC 386
           G+ G+++    S+F+ELA+ AMDEL+++AQ D P+W+ S +G G++ LN  EY+RTF+PC
Sbjct: 280 GMMGVEKPFNSSVFVELAVTAMDELLRLAQADSPIWMTSLDG-GKETLNPVEYMRTFSPC 338

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
           IGLKP+GFVTEASRETGMV+INSLALVETLMD +RWA+MFPC+IA+ +TTDV+SSG+G T
Sbjct: 339 IGLKPSGFVTEASRETGMVMINSLALVETLMDGSRWAQMFPCVIAKASTTDVLSSGIGRT 398

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
           R+GALQLMHAELQVLSPLVPVR+V FLRFCKQH EG+WAVVDVSIDT  + +   +FVNC
Sbjct: 399 RHGALQLMHAELQVLSPLVPVRQVKFLRFCKQHGEGLWAVVDVSIDTALDGASINSFVNC 458

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RRL SGCVVQD+ NGY++VTW+EH+EYDES VH LY+ L+ SG+GFGA RW+ATLQRQCE
Sbjct: 459 RRLLSGCVVQDLSNGYTRVTWIEHSEYDESAVHYLYRSLLSSGLGFGALRWLATLQRQCE 518

Query: 567 CLAILMSTSVSARDH 581
            +AIL+S++V   DH
Sbjct: 519 SIAILLSSTVPCEDH 533


>gi|31339103|dbj|BAC77158.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 790

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 334/553 (60%), Positives = 410/553 (74%), Gaps = 31/553 (5%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSD 116
           P +    +SP LSLAL        G         G S  G +   +R+   E++SRSGSD
Sbjct: 4   PFASGFASSPALSLALDNAGGGIGGRMLGGGAGAGSSAGGAM---TRDTEAENDSRSGSD 60

Query: 117 NMDG--ASGDDLDAADNPP-----RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           ++D   A+G+D D  D  P     RKKRYHRHTPQQIQELE+LFKECPHPDEKQR ELS+
Sbjct: 61  HLDAISAAGED-DVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRAELSR 119

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG 
Sbjct: 120 RLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRSPMCGSCGS 179

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---------PVSSMGPPPMPNS 280
           PA++G++SLEEQHLRIENARLKDEL+RVCALA KFLG+          +      PMPNS
Sbjct: 180 PAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNS 239

Query: 281 SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNR-SGPGVTGLDRSIERSM 339
           SLEL +G I G G L +        +F  G+S+ +  V+ P R +G  +  L  +I+RS+
Sbjct: 240 SLELAIGGIGGLGSLGTLPGCM--NEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSV 297

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
           FLELA++AMDELVKMAQ D+PLW+ +  GS  ++VLN EEYL +F PCIG+KP G+V+EA
Sbjct: 298 FLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEA 357

Query: 399 SRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           SRE+G+VII NSLALVETLMD  RW++MF CMIA+    + +S+G+ G+RNGAL LM AE
Sbjct: 358 SRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLMKAE 417

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRETSGAPA----FVNCRRLPSG 512
           LQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+ +   A     V CRR+PSG
Sbjct: 418 LQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSG 477

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           CV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ FGA+RW+ATLQRQCECLAILM
Sbjct: 478 CVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILM 537

Query: 573 ST-SVSARDHTGI 584
           S+ +V+A D T I
Sbjct: 538 SSATVTANDSTAI 550


>gi|224136964|ref|XP_002322460.1| predicted protein [Populus trichocarpa]
 gi|222869456|gb|EEF06587.1| predicted protein [Populus trichocarpa]
          Length = 748

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/505 (61%), Positives = 383/505 (75%), Gaps = 14/505 (2%)

Query: 83  GDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHT 142
           GD+ L  +GE F+  +  R RED   +ESRSGSDN++GASG+D DA D    +K+Y+RHT
Sbjct: 5   GDMGL--LGEHFDPSLVGRMRED--GYESRSGSDNIEGASGEDQDAGDYQRPRKKYNRHT 60

Query: 143 PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
             QIQELES FKECPHPDEKQR ELS+RL LE++Q+KFWFQNRRTQMKTQLERHEN++LR
Sbjct: 61  ANQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQLERHENAILR 120

Query: 203 QENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAG 262
           QENDKLRAEN  ++  M +PIC NCGGP +   +S E+Q LRIENARLKDEL RVCALA 
Sbjct: 121 QENDKLRAENELLKQNMSDPICNNCGGPVVPVPVSYEQQQLRIENARLKDELGRVCALAN 180

Query: 263 KFLGRPVSSMGPPPMP---NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVM 319
           KFLGRP++S   P  P   N+  +L VG  NG+G L  T   TLP     G+ N   V+M
Sbjct: 181 KFLGRPLTSSASPVPPFGSNTKFDLAVGR-NGYGNLGHT-DNTLP----MGLDNNGGVMM 234

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY 379
           P  +      G +   +RSMF++LALAAMDEL+K+AQ + P+WI+S +G G++VLNHEEY
Sbjct: 235 PLMKPIGNAVGNEVPFDRSMFVDLALAAMDELIKIAQVESPIWIKSLDG-GKEVLNHEEY 293

Query: 380 LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVI 439
           +RTF PCIG+KP+ FV EA+RE+G+V+ NSL LVETLMD N W EMFP +IAR AT D++
Sbjct: 294 MRTFPPCIGMKPSNFVIEATRESGVVLANSLDLVETLMDVNGWVEMFPSLIARAATIDIV 353

Query: 440 SSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG 499
           SSGMGGT++GALQ++HAE QV+SP VPVR+V FLR CKQ AEGVWAV DVS+D  +E   
Sbjct: 354 SSGMGGTKSGALQMIHAEFQVISPFVPVRQVKFLRLCKQLAEGVWAVADVSVDGNQENLN 413

Query: 500 APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVA 559
           A   V CRRLPSGC++QDM NG  KVTWVEH+EYDES VH+LY+ ++ SGMGFGAQRW+A
Sbjct: 414 AQTPVTCRRLPSGCIIQDMNNGCCKVTWVEHSEYDESAVHRLYRHILNSGMGFGAQRWIA 473

Query: 560 TLQRQCECLAILMSTSVSARDHTGI 584
            LQR  EC+A+L+S ++   D T I
Sbjct: 474 ALQRHYECMAMLLSPTILGEDQTVI 498


>gi|223950133|gb|ACN29150.1| unknown [Zea mays]
 gi|345193169|tpg|DAA34950.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414876613|tpg|DAA53744.1| TPA: outer cell layer1 [Zea mays]
          Length = 803

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 334/557 (59%), Positives = 411/557 (73%), Gaps = 45/557 (8%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDL-QLQRMGESFEGIIGRRSREDLLEHESRSGS 115
           P S    +SP LSL L+ P     GGG + ++  +G +       R   D  E++SRSGS
Sbjct: 23  PFSTGFSSSPALSLGLENP-----GGGMVGRMLPVGGAPAAGGMARDAADA-ENDSRSGS 76

Query: 116 DNMD----GASGDDLDAAD--NP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELS 168
           D++D    GA  +D D A+  NP  RKKRYHRHTPQQIQELE+LFKECPHPDEKQR ELS
Sbjct: 77  DHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELS 136

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCG 228
           KRL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG
Sbjct: 137 KRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 196

Query: 229 GPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP--------PMPNS 280
            PA++G++SLEEQHL IENARLKDEL+RV ALA KFLG+P+  +  P        PMP+S
Sbjct: 197 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 256

Query: 281 SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG----PGVTGLDRSIE 336
           SLEL VG + G G + S        +F  G+S+ L  V+ P R+     P + G+D    
Sbjct: 257 SLELAVGGLRGLGSIPSL------DEFAGGVSSPLGTVITPARATGSAPPPMVGVD---- 306

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIG-LKPNGF 394
           RSM LELA++AMDELVK+AQ DEPLW+ S  GS  +++LN EEY  +F+P +G +KP G+
Sbjct: 307 RSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKPVGY 366

Query: 395 VTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + ++SG+ G+RNGAL L
Sbjct: 367 VSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLL 426

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRE----TSGAPAFVNCRR 508
           M AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+    T+     + CRR
Sbjct: 427 MKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRR 486

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           LPSGCV+QD PNGY KVTWVE+ EYDE+ VHQLY+PLI SG+ FGA+RW+A LQRQCECL
Sbjct: 487 LPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECL 546

Query: 569 AILMS-TSVSARDHTGI 584
           AILMS  +VSA D + I
Sbjct: 547 AILMSPDTVSANDSSVI 563


>gi|357159532|ref|XP_003578476.1| PREDICTED: homeobox-leucine zipper protein ROC6-like isoform 2
           [Brachypodium distachyon]
          Length = 777

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 303/490 (61%), Positives = 379/490 (77%), Gaps = 33/490 (6%)

Query: 114 GSDNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           GSDN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL
Sbjct: 17  GSDNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL 76

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
            LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMR+PIC NCGG A
Sbjct: 77  NLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRSPICGNCGGAA 136

Query: 232 IIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTING 291
           ++G++SLEEQHLRIEN+RLKDELDRVC+LAGKFLGRP+S++       S LE G+G  NG
Sbjct: 137 VLGEVSLEEQHLRIENSRLKDELDRVCSLAGKFLGRPISTI------TSGLEFGIGATNG 190

Query: 292 FGGL------SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDR-----SIERSMF 340
           FG L      SS+V  ++P   G   + A+       R   G++GLD      +++R + 
Sbjct: 191 FGALGPLGGSSSSVLQSIPDLMGGSSAAAM-------RLPAGISGLDDAESAIAVDRGVL 243

Query: 341 LELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASR 400
           LEL LAAMDELVK+ Q D+PLW+ S + SG + LN++EY R F   +   P GFV+EA+R
Sbjct: 244 LELGLAAMDELVKVTQVDDPLWLPSLD-SGFETLNNDEYRRAFPRVLAHSPAGFVSEATR 302

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQV 460
           E G+ I++S  LV++LMD  RWAEMFPC++AR +TTD+IS GM GTR+G++QLMHAELQV
Sbjct: 303 EVGLAIVSSAELVDSLMDAARWAEMFPCVVARASTTDIISGGMPGTRSGSIQLMHAELQV 362

Query: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVNCRRLPSGCV 514
           LSPLVP+REV FLRFCKQHAEG+WAVVDVS D +           A  ++ CR LPSGCV
Sbjct: 363 LSPLVPIREVTFLRFCKQHAEGLWAVVDVSADGVLRPDGGAGNGAAAGYMGCRLLPSGCV 422

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           V+DM NGY+KVTWV HAEYDE+ VH LY+PL+ SG   GA+RW+A+LQRQC+ LAIL + 
Sbjct: 423 VEDMRNGYAKVTWVVHAEYDETAVHHLYRPLLRSGQALGARRWLASLQRQCQYLAILRNN 482

Query: 575 SVSARDHTGI 584
           S+ ++D+  I
Sbjct: 483 SLPSQDNQAI 492


>gi|414876612|tpg|DAA53743.1| TPA: outer cell layer1 [Zea mays]
          Length = 702

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 334/557 (59%), Positives = 411/557 (73%), Gaps = 45/557 (8%)

Query: 57  PLSKSMFNSPGLSLALQQPNIDNQGGGDL-QLQRMGESFEGIIGRRSREDLLEHESRSGS 115
           P S    +SP LSL L+ P     GGG + ++  +G +       R   D  E++SRSGS
Sbjct: 23  PFSTGFSSSPALSLGLENP-----GGGMVGRMLPVGGAPAAGGMARDAADA-ENDSRSGS 76

Query: 116 DNMD----GASGDDLDAAD--NP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELS 168
           D++D    GA  +D D A+  NP  RKKRYHRHTPQQIQELE+LFKECPHPDEKQR ELS
Sbjct: 77  DHLDAMSAGAGAEDEDDAEPGNPRKRKKRYHRHTPQQIQELEALFKECPHPDEKQRGELS 136

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCG 228
           KRL L+ RQVKFWFQNRRTQMKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG
Sbjct: 137 KRLGLDPRQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCG 196

Query: 229 GPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP--------PMPNS 280
            PA++G++SLEEQHL IENARLKDEL+RV ALA KFLG+P+  +  P        PMP+S
Sbjct: 197 SPAMLGEVSLEEQHLCIENARLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSS 256

Query: 281 SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG----PGVTGLDRSIE 336
           SLEL VG + G G + S        +F  G+S+ L  V+ P R+     P + G+D    
Sbjct: 257 SLELAVGGLRGLGSIPSL------DEFAGGVSSPLGTVITPARATGSAPPPMVGVD---- 306

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIG-LKPNGF 394
           RSM LELA++AMDELVK+AQ DEPLW+ S  GS  +++LN EEY  +F+P +G +KP G+
Sbjct: 307 RSMLLELAISAMDELVKLAQVDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKPVGY 366

Query: 395 VTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + ++SG+ G+RNGAL L
Sbjct: 367 VSEASRESGLVIIDNSLALVETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLL 426

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-TIRE----TSGAPAFVNCRR 508
           M AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID  +R+    T+     + CRR
Sbjct: 427 MKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRR 486

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           LPSGCV+QD PNGY KVTWVE+ EYDE+ VHQLY+PLI SG+ FGA+RW+A LQRQCECL
Sbjct: 487 LPSGCVMQDTPNGYCKVTWVEYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECL 546

Query: 569 AILMS-TSVSARDHTGI 584
           AILMS  +VSA D + I
Sbjct: 547 AILMSPDTVSANDSSVI 563


>gi|77378038|gb|ABA70760.1| baby boom interacting protein 2 [Brassica napus]
          Length = 697

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/458 (67%), Positives = 373/458 (81%), Gaps = 20/458 (4%)

Query: 124 DDLDAADNPPRKK-RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           DDL+  D PPRKK RYHRHT +QIQ+LES+FKEC HPDEKQRL+LS++L L+ RQVKFWF
Sbjct: 1   DDLETGDKPPRKKKRYHRHTAKQIQDLESVFKECAHPDEKQRLDLSRKLNLDPRQVKFWF 60

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMKTQ+ERHEN+LLRQENDKLRAENMS+R+AMRNP+C+NCGGPA++G++S+EEQH
Sbjct: 61  QNRRTQMKTQIERHENALLRQENDKLRAENMSVREAMRNPMCSNCGGPAVLGEVSMEEQH 120

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTT 302
           LRIEN+RLKDELDRVCAL GKFLGR  S     P  +  L +GVG+  GF   S ++   
Sbjct: 121 LRIENSRLKDELDRVCALTGKFLGRSTSGSHHVPDSSLVLGVGVGSGGGFSLSSPSLPQA 180

Query: 303 LP---ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDE 359
            P      GTG++         NR  P V+  D   +RS +L+LALAAM+ELVKMAQ  E
Sbjct: 181 SPRFEISNGTGLATV-------NRQRP-VSDFD---QRSRYLDLALAAMEELVKMAQRHE 229

Query: 360 PLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDP 419
           PLW+RS E +G ++LN EEY  +F+  +G K +GFV+EAS+ETG VIINSLALVETLMD 
Sbjct: 230 PLWVRSSE-TGFEMLNKEEYDTSFSRVVGPKQDGFVSEASKETGNVIINSLALVETLMDS 288

Query: 420 NRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQH 479
            RWAEMFP MI+RT+TT++ISSGMGGTRNGAL LMHAELQ+LSPLVPVR+V+FLRFCKQH
Sbjct: 289 ERWAEMFPSMISRTSTTEIISSGMGGTRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQH 348

Query: 480 AEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH 539
           AEGVWAVVDVSID+IRE S +    +CRRLPSGC+VQDM NGYSKVTW+EH EYDE+++H
Sbjct: 349 AEGVWAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWIEHTEYDETRIH 404

Query: 540 QLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +LY+PL+  G+ FGAQRW+A LQRQCECL ILMS++VS
Sbjct: 405 RLYRPLLSCGLAFGAQRWMAALQRQCECLTILMSSTVS 442


>gi|116310008|emb|CAH67034.1| OSIGBa0139P06.7 [Oryza sativa Indica Group]
          Length = 805

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 326/557 (58%), Positives = 400/557 (71%), Gaps = 39/557 (7%)

Query: 64  NSPGLSLALQQPNI--DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDNM 118
           +SP LSLAL       ++ GGG +     G    G  GR    D LE E   SRSGSD++
Sbjct: 15  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGRAKARDALEVENEMSRSGSDHL 74

Query: 119 DGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR 
Sbjct: 75  DVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRA 134

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C 
Sbjct: 135 ELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVCV 194

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMPN 279
            CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P 
Sbjct: 195 GCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVPG 254

Query: 280 SSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
           SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++S
Sbjct: 255 SSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDKS 310

Query: 339 MFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFV 395
           +FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+V
Sbjct: 311 LFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYV 370

Query: 396 TEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           +EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL LM
Sbjct: 371 SEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLM 430

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRRL 509
            AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + A +NCRRL
Sbjct: 431 QAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRL 490

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
           PSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+  GA RW+ATLQRQCECLA
Sbjct: 491 PSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLA 550

Query: 570 ILMST-SVSARDHTGIY 585
           +LMS+ ++   D + I+
Sbjct: 551 LLMSSIALPENDSSAIH 567


>gi|110430672|gb|ABG73462.1| homeodomain transcription factor [Oryza brachyantha]
          Length = 844

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 354/619 (57%), Positives = 438/619 (70%), Gaps = 56/619 (9%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +        G G+ +    SY   D            + + RLL + P P   
Sbjct: 1   MSFGGMFD--------GAGSGV---FSY---DAGGGGGGGGGGGVHNSRLLPAPPVPKPG 46

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQ--LQRMGESFEGIIGR-----RSREDLLEHESRS 113
             + +PGLSL LQ  N+D    GD+   L  MG    G  G      R RED  E++SRS
Sbjct: 47  GGYAAPGLSLGLQT-NMDGGHLGDMNRSLAMMGNGGSGSGGDGDSLGRGRED--ENDSRS 103

Query: 114 GSDNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           GSDN+DGASGDDLD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL
Sbjct: 104 GSDNLDGASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRL 163

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
            LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A
Sbjct: 164 NLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAA 223

Query: 232 IIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVG 287
           ++G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+  P  P+    S LELGVG
Sbjct: 224 VLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPSPPSLQACSGLELGVG 283

Query: 288 TINGF--GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL----------DRSI 335
           + NGF  G L ++   ++P   G   S  LPV     R   G+ GL            +I
Sbjct: 284 S-NGFGLGALGASGLQSIPDLMGG--SAGLPVGSAAMRLPAGIGGLDGAMHAAAADGGAI 340

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           +R++ LELALAAMDELVK+AQ DEPLW+ S +G G + LN++EY R F   +G  P  +V
Sbjct: 341 DRAVLLELALAAMDELVKVAQMDEPLWLPSLDG-GFEALNYDEYHRAFARVLGQSPGSYV 399

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 455
           +EA+RE+G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLMH
Sbjct: 400 SEATRESGIAIISSVDLVDSLMDAPRWSEMFPCIVARASTTDIISSGMGGTRSGSIQLMH 459

Query: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVV----------DVSIDTIRETSGAPAFVN 505
           AELQVLSPLVP+REV FLRFCKQHAEG+WAVV          D +       S + +++ 
Sbjct: 460 AELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGGGVSSSSSYMG 519

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           CR LP+GC+VQDM NGYSKVTWV HA YDE+ VHQLY+PL+ SG   GA+RW+A+LQRQC
Sbjct: 520 CRLLPTGCIVQDMNNGYSKVTWVVHAAYDETAVHQLYRPLLRSGQALGARRWLASLQRQC 579

Query: 566 ECLAILMSTSVSARDHTGI 584
           + LAIL S S+ ARDH  I
Sbjct: 580 QYLAILCSNSLPARDHAAI 598


>gi|115459990|ref|NP_001053595.1| Os04g0569100 [Oryza sativa Japonica Group]
 gi|38344373|emb|CAD41424.2| OSJNBb0032E06.7 [Oryza sativa Japonica Group]
 gi|113565166|dbj|BAF15509.1| Os04g0569100 [Oryza sativa Japonica Group]
          Length = 806

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 327/558 (58%), Positives = 399/558 (71%), Gaps = 40/558 (7%)

Query: 64  NSPGLSLALQQPNID-NQGGGD--LQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDN 117
           +SP LSLAL       N GGG   +     G    G  GR    D LE E   SRSGSD+
Sbjct: 15  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGGRAKARDALEVENEMSRSGSDH 74

Query: 118 MDGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
           +D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR
Sbjct: 75  LDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQR 134

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC 224
            ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C
Sbjct: 135 AELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVC 194

Query: 225 TNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMP 278
             CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P
Sbjct: 195 VGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVP 254

Query: 279 NSSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++
Sbjct: 255 GSSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDK 310

Query: 338 SMFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGF 394
           S+FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+
Sbjct: 311 SLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGY 370

Query: 395 VTEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL L
Sbjct: 371 VSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLL 430

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRR 508
           M AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + A +NCRR
Sbjct: 431 MQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRR 490

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           LPSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+  GA RW+ATLQRQCECL
Sbjct: 491 LPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECL 550

Query: 569 AILMST-SVSARDHTGIY 585
           A+LMS+ ++   D + I+
Sbjct: 551 ALLMSSIALPENDSSAIH 568


>gi|224120056|ref|XP_002318231.1| predicted protein [Populus trichocarpa]
 gi|222858904|gb|EEE96451.1| predicted protein [Populus trichocarpa]
          Length = 734

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/489 (61%), Positives = 373/489 (76%), Gaps = 13/489 (2%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G R +ED   +ESRSGSDN++GASG+D D  D+   +K+Y+RHT  QIQELES FKECPH
Sbjct: 4   GGRIKED--GYESRSGSDNIEGASGEDQDVGDDQRPRKKYNRHTANQIQELESFFKECPH 61

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQR ELS+RL LE++Q+KFWFQNRRTQMKTQLERHEN +LRQ+NDKLR EN  ++  
Sbjct: 62  PDEKQRSELSRRLGLESKQIKFWFQNRRTQMKTQLERHENVILRQDNDKLRLENELLKQN 121

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG---PP 275
           M +PIC NCGGP + G +S E+Q LRIENARL DEL RVCALA KFLGRP++S     PP
Sbjct: 122 MSDPICNNCGGPVVPGPVSDEQQQLRIENARLTDELGRVCALANKFLGRPLTSSANPIPP 181

Query: 276 PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
              NS L+L VG ING+G L  T    LP     G+ N   ++MP  +      G +   
Sbjct: 182 FSTNSKLDLAVG-INGYGNLGHT-DNMLP----MGLDNNRGIMMPLMKPIGNAVGKEVPH 235

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           +RS+F++LALAAMDEL+KMAQ + P+WI+S +G G++VLNHEEY RTF P IG+KP+ FV
Sbjct: 236 DRSIFVDLALAAMDELIKMAQIESPIWIKSLDG-GKEVLNHEEYTRTF-PRIGMKPSNFV 293

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 455
           TEA+R +G+V++N  ALVETLMD N W EMFP +IAR ATTD+ISSGMGGT++GALQ++H
Sbjct: 294 TEATRVSGVVLVNISALVETLMDVNGWVEMFPSLIARAATTDIISSGMGGTKSGALQMIH 353

Query: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVV 515
           AE Q++SP VPVR+V FLR CKQ  EGVWAVVDVSID  +E   A A V C+RLPSGC++
Sbjct: 354 AEFQLISPFVPVRQVKFLRLCKQLTEGVWAVVDVSIDANQENLNAQAPVTCKRLPSGCII 413

Query: 516 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           QDM NG SKVTWVEH+EYDES VHQLY+P++ SG GFGAQRW+A LQR  E +A++MS S
Sbjct: 414 QDMNNGCSKVTWVEHSEYDESAVHQLYRPILSSGRGFGAQRWLAALQRYYEGMAMIMSPS 473

Query: 576 VSARDHTGI 584
           +   D T I
Sbjct: 474 ILGEDQTVI 482


>gi|31339101|dbj|BAC77157.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 813

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 327/565 (57%), Positives = 399/565 (70%), Gaps = 47/565 (8%)

Query: 64  NSPGLSLALQQPNID-NQGGGD--LQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDN 117
           +SP LSLAL       N GGG   +     G    G  GR    D LE E   SRSGSD+
Sbjct: 15  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGGRAKARDALEVENEMSRSGSDH 74

Query: 118 MDGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
           +D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR
Sbjct: 75  LDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQR 134

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC 224
            ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C
Sbjct: 135 AELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVC 194

Query: 225 TNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMP 278
             CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P
Sbjct: 195 VGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVP 254

Query: 279 NSSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++
Sbjct: 255 GSSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDK 310

Query: 338 SMFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGF 394
           S+FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+
Sbjct: 311 SLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGY 370

Query: 395 VTEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL L
Sbjct: 371 VSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLL 430

Query: 454 -------MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----AP 501
                  M AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + 
Sbjct: 431 VSDEHSVMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASST 490

Query: 502 AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
           A +NCRRLPSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+  GA RW+ATL
Sbjct: 491 ANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATL 550

Query: 562 QRQCECLAILMST-SVSARDHTGIY 585
           QRQCECLA+LMS+ ++   D + I+
Sbjct: 551 QRQCECLALLMSSIALPENDSSAIH 575


>gi|187611423|sp|Q7Y0V9.2|ROC4_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC4; AltName:
           Full=GLABRA 2-like homeobox protein 4; AltName:
           Full=HD-ZIP protein ROC4; AltName: Full=Homeodomain
           transcription factor ROC4; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 4
          Length = 813

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 327/565 (57%), Positives = 399/565 (70%), Gaps = 47/565 (8%)

Query: 64  NSPGLSLALQQPNID-NQGGGD--LQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDN 117
           +SP LSLAL       N GGG   +     G    G  GR    D LE E   SRSGSD+
Sbjct: 15  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGGRAKARDALEVENEMSRSGSDH 74

Query: 118 MDGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
           +D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR
Sbjct: 75  LDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQR 134

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC 224
            ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C
Sbjct: 135 AELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVC 194

Query: 225 TNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMP 278
             CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P
Sbjct: 195 VGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVP 254

Query: 279 NSSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++
Sbjct: 255 GSSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDK 310

Query: 338 SMFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGF 394
           S+FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+
Sbjct: 311 SLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGY 370

Query: 395 VTEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL L
Sbjct: 371 VSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLL 430

Query: 454 -------MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----AP 501
                  M AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + 
Sbjct: 431 VSDEHSVMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASST 490

Query: 502 AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
           A +NCRRLPSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+  GA RW+ATL
Sbjct: 491 ANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATL 550

Query: 562 QRQCECLAILMST-SVSARDHTGIY 585
           QRQCECLA+LMS+ ++   D + I+
Sbjct: 551 QRQCECLALLMSSIALPENDSSAIH 575


>gi|356529261|ref|XP_003533214.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 771

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 318/515 (61%), Positives = 393/515 (76%), Gaps = 20/515 (3%)

Query: 69  SLALQQPNIDNQGGGDLQLQRMGESFE--GIIGRRSREDLLEHESRSGSDNMDGASGDDL 126
           ++ LQQ  ++    G  ++ ++GESF+   ++GR  R+D  E+ESRSGSDN DG SGDD 
Sbjct: 14  TIILQQRRME----GHSEMGQIGESFDTSNLLGRL-RDD--EYESRSGSDNFDGGSGDDQ 66

Query: 127 DAADNPPRKKR--YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           DA D+ P KK+  YHRHTPQQIQELE+ FKECPHPDEKQR +LSKRL LE +QVKFWFQN
Sbjct: 67  DAGDDQPHKKKKKYHRHTPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQN 126

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           RRTQMKTQLERHEN +LRQENDKLRAEN  ++DA+ NP C NCGGPAI G ISLEE   R
Sbjct: 127 RRTQMKTQLERHENMILRQENDKLRAENSVMKDALANPTCNNCGGPAIPGQISLEEHQTR 186

Query: 245 IENARLKDELDRVCALAGKFLGRPVSSMGPP---PMPNSSLELGVGTINGFGGLSSTVTT 301
           +ENARLKDEL+R+CALA KFLGRP+S +  P   P  NS LEL +G  NG GG  S    
Sbjct: 187 MENARLKDELNRICALANKFLGRPLSPLASPMALPPSNSGLELAIGR-NGIGG-PSNFGM 244

Query: 302 TLPA--DFGTGISNALPVVMPPNRSGP-GVTGLDRSIERSMFLELALAAMDELVKMAQTD 358
           +LP   D G G+  + P +       P G+ G +  +ERSM L+LAL AM+EL+KMAQ D
Sbjct: 245 SLPMGFDVGDGVMGSSPGMSSMGARSPMGMMGNEIQLERSMLLDLALNAMNELIKMAQPD 304

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
             LWI+S +G   +VLNH+EY R F+P +G KP G+VTEA+R TG+V  +SL +VETLMD
Sbjct: 305 TSLWIKSSDGRN-EVLNHDEYARLFSPYVGSKPAGYVTEATRGTGVVPASSLGIVETLMD 363

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
            +RWAEMF  MIA  AT +V+SSGMG +R+GALQ+M AE+Q+LSPLVP R ++FLR+ KQ
Sbjct: 364 VDRWAEMFSSMIASAATLEVLSSGMGESRSGALQVMLAEVQLLSPLVPARSLSFLRYSKQ 423

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           H EGVWAVVDVS+D  R  + +   ++CRRLPSGCV+QDMPNG+SK+TWVEH++YDES V
Sbjct: 424 HGEGVWAVVDVSVDIGRNVTNSHPLMSCRRLPSGCVIQDMPNGFSKITWVEHSQYDESVV 483

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           HQLY+PL+ SG+GFGAQRW+ATL RQC+CLAILMS
Sbjct: 484 HQLYRPLVSSGIGFGAQRWIATLLRQCDCLAILMS 518


>gi|218195394|gb|EEC77821.1| hypothetical protein OsI_17027 [Oryza sativa Indica Group]
          Length = 849

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 326/584 (55%), Positives = 400/584 (68%), Gaps = 66/584 (11%)

Query: 64  NSPGLSLALQQPNI--DNQGGGDLQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDNM 118
           +SP LSLAL       ++ GGG +     G    G  GR    D LE E   SRSGSD++
Sbjct: 32  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGRAKARDALEVENEMSRSGSDHL 91

Query: 119 DGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR 
Sbjct: 92  DVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQRA 151

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C 
Sbjct: 152 ELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVCV 211

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMPN 279
            CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P 
Sbjct: 212 GCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVPG 271

Query: 280 SSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
           SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++S
Sbjct: 272 SSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDKS 327

Query: 339 MFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFV 395
           +FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+V
Sbjct: 328 LFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYV 387

Query: 396 TEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           +EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL LM
Sbjct: 388 SEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLM 447

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRRL 509
            AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + A +NCRRL
Sbjct: 448 QAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRRL 507

Query: 510 PSGCVVQDMPNGYSK---------------------------VTWVEHAEYDESQVHQLY 542
           PSGCV+QD PNG+ K                           VTWVEH EYDE+ VH LY
Sbjct: 508 PSGCVLQDTPNGFVKYLVQISVFSEVYNLSIDQFLDLPPAFMVTWVEHTEYDEASVHPLY 567

Query: 543 KPLIISGMGFGAQRWVATLQRQCECLAILMST-SVSARDHTGIY 585
           +PL+ SG+  GA RW+ATLQRQCECLA+LMS+ ++   D + I+
Sbjct: 568 RPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIH 611


>gi|356561699|ref|XP_003549117.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Glycine max]
          Length = 827

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 319/512 (62%), Positives = 389/512 (75%), Gaps = 17/512 (3%)

Query: 83  GDLQLQRMGESFE--GIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKR--Y 138
           G  ++  MGESF+   ++GR  R+D  E+ESRSGSDN DG SGDD DA D+ P KK+  Y
Sbjct: 88  GHSEMGLMGESFDTSNLLGRM-RDD--EYESRSGSDNFDGGSGDDQDAGDDQPHKKKKKY 144

Query: 139 HRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHEN 198
           HRHTPQQIQELE+ FKECPHPDEKQR +LSKRL LE +QVKFWFQNRRTQMKTQLERHEN
Sbjct: 145 HRHTPQQIQELEAFFKECPHPDEKQRTDLSKRLGLENKQVKFWFQNRRTQMKTQLERHEN 204

Query: 199 SLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVC 258
            +LRQENDKLRAEN  ++DA+ NPIC NCGGPAI G ISLEE   R+ENARLKDEL+R+C
Sbjct: 205 MILRQENDKLRAENSVMKDALANPICNNCGGPAIPGQISLEEHQTRMENARLKDELNRIC 264

Query: 259 ALAGKFLGRPVSSMGPP---PMPNSSLELGVGTINGFGGLSSTVTTTLPA--DFGTGISN 313
           ALA KFLGRP+S +  P   P  NS LEL +G  NG GG SS     LP   D G G   
Sbjct: 265 ALANKFLGRPLSPLASPMALPPSNSGLELAIGR-NGLGG-SSNFGMPLPMGFDVGDGALG 322

Query: 314 ALPVVMPPNRSGP-GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQ 372
           + P +       P G+ G +  +ERSM L+LAL+AM+EL+KMAQ D  LWI+S +G   +
Sbjct: 323 SSPAMSTMGARSPMGMMGNEIQLERSMLLDLALSAMNELIKMAQPDTSLWIKSSDGR-NE 381

Query: 373 VLNHEEYLRTFTPCIGLKPN-GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           VLNH+EY R F+P IG KP  G+VTEA+R TG+V  +SL LVE LMD ++W+EMF  MIA
Sbjct: 382 VLNHDEYARLFSPYIGSKPAAGYVTEATRGTGVVSASSLGLVEILMDADQWSEMFSSMIA 441

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
             AT +V+SSG GGTR+GALQ+M AE+Q+LSPLVP R+V+FLRFCK+HAEG+WAVVDVS+
Sbjct: 442 SAATVEVLSSGTGGTRSGALQVMLAEVQLLSPLVPARQVSFLRFCKKHAEGLWAVVDVSV 501

Query: 492 DTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMG 551
           D  R  + +   ++CRRLPSGCV+QDMPNG+S +TWVEH++YDES +HQLY+PL+ SG+G
Sbjct: 502 DIGRNVTNSHPLMSCRRLPSGCVIQDMPNGFSNITWVEHSQYDESVIHQLYRPLVSSGIG 561

Query: 552 FGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           FGAQRW+ATL RQC+CLAIL S    + D T 
Sbjct: 562 FGAQRWIATLLRQCDCLAILRSPQGPSEDPTA 593


>gi|125564438|gb|EAZ09818.1| hypothetical protein OsI_32106 [Oryza sativa Indica Group]
          Length = 815

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/620 (55%), Positives = 433/620 (69%), Gaps = 55/620 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +       G G      D         +N+           RLL + P P   
Sbjct: 1   MSFGGMFD-------GAGSGVFSYDAGGGGGGGVHNS-----------RLLPTPPVPKPG 42

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR-----RSREDLLEHESRSGS 115
             F +PGLSL LQ  +    G  +  L  MG    G  G      R RE+  E++SRSGS
Sbjct: 43  GGFAAPGLSLGLQTMDGSQLGDVNRSLAMMGNGGSGSGGDGDSLGRGREE--ENDSRSGS 100

Query: 116 DNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           DN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL L
Sbjct: 101 DNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNL 160

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A++
Sbjct: 161 ESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVL 220

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT- 288
           G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+  P  P+    S LELGVG+ 
Sbjct: 221 GEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPSLQACSGLELGVGSN 280

Query: 289 --INGFGGLSSTVTTTLPADFG--TGISNALPVVMPPNRSGPGVTGL----------DRS 334
                    +S    ++P   G  +G++   PV     R   G+ GL            +
Sbjct: 281 GGFGLGALGASAAMQSIPDLMGGSSGLTGG-PVGSAAMRLPAGIGGLDGAMHAAAADGGA 339

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           I+R++ LELALAAMDELVK+AQ DEPLW+ S +G G + LN++EY R F   +G  P G+
Sbjct: 340 IDRAVLLELALAAMDELVKVAQMDEPLWLPSLDG-GFETLNYDEYHRAFARVVGQCPAGY 398

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           V+EA+RE+G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLM
Sbjct: 399 VSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQLM 458

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-------DTIRETSGAPAFVNCR 507
           HAELQVLSPLVP+REV FLRFCKQHAEG+WAVVDVS+             S + +++ CR
Sbjct: 459 HAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCR 518

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
            LP+GC+VQDM NGYSKVTWV HAEYDE+  HQLY+PL+ SG   GA+RW+A+LQRQC+ 
Sbjct: 519 LLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQY 578

Query: 568 LAILMSTSVSARDHTGIYDI 587
           LAIL S S+ ARDH  I  +
Sbjct: 579 LAILCSNSLPARDHAAITPV 598


>gi|125571186|gb|EAZ12701.1| hypothetical protein OsJ_02619 [Oryza sativa Japonica Group]
          Length = 840

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/620 (55%), Positives = 433/620 (69%), Gaps = 54/620 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +       G G      D          +N+          RLL + P P   
Sbjct: 1   MSFGGMFD-------GAGSGVFSYDAGGGGGGGGVHNS----------RLLPTPPVPKPG 43

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR-----RSREDLLEHESRSGS 115
             F +PGLSL LQ  +    G  +  L  MG    G  G      R RE+  E++SRSGS
Sbjct: 44  GGFAAPGLSLGLQTMDGSQLGDVNRSLAMMGNGGSGSGGDGDSLGRGREE--ENDSRSGS 101

Query: 116 DNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           DN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL L
Sbjct: 102 DNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNL 161

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A++
Sbjct: 162 ESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVL 221

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT- 288
           G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+  P  P+    S LELGVG+ 
Sbjct: 222 GEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPSLQACSGLELGVGSN 281

Query: 289 --INGFGGLSSTVTTTLPADFG--TGISNALPVVMPPNRSGPGVTGL----------DRS 334
                    +S    ++P   G  +G++   PV     R   G+ GL            +
Sbjct: 282 GGFGLGALGASAAMQSIPDLMGGSSGLTGG-PVGSAAMRLPAGIGGLDGAMHAAAADGGA 340

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           I+R++ LELALAAMDELVK+AQ DEPLW+ S +G G + LN++EY R F   +G  P G+
Sbjct: 341 IDRAVLLELALAAMDELVKVAQMDEPLWLPSLDG-GFETLNYDEYHRAFARVVGQCPAGY 399

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           V+EA+RE+G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLM
Sbjct: 400 VSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQLM 459

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-------DTIRETSGAPAFVNCR 507
           HAELQVLSPLVP+REV FLRFCKQHAEG+WAVVDVS+             S + +++ CR
Sbjct: 460 HAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGCR 519

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
            LP+GC+VQDM NGYSKVTWV HAEYDE+  HQLY+PL+ SG   GA+RW+A+LQRQC+ 
Sbjct: 520 LLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQY 579

Query: 568 LAILMSTSVSARDHTGIYDI 587
           LAIL S S+ ARDH  I  +
Sbjct: 580 LAILCSNSLPARDHAAITPV 599


>gi|222629392|gb|EEE61524.1| hypothetical protein OsJ_15826 [Oryza sativa Japonica Group]
          Length = 833

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 327/585 (55%), Positives = 399/585 (68%), Gaps = 67/585 (11%)

Query: 64  NSPGLSLALQQPNID-NQGGGD--LQLQRMGESFEGIIGRRSREDLLEHE---SRSGSDN 117
           +SP LSLAL       N GGG   +     G    G  GR    D LE E   SRSGSD+
Sbjct: 15  SSPALSLALADAVAGRNSGGGGKMVTAAHGGVGGGGGGGRAKARDALEVENEMSRSGSDH 74

Query: 118 MDGAS------------GDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
           +D  S             D+     NPP RKKRYHRHTPQQIQELE++FKECPHPDEKQR
Sbjct: 75  LDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTPQQIQELEAMFKECPHPDEKQR 134

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC 224
            ELSKRL LE RQVKFWFQNRRTQMK QLERHENSLL+QENDKLR+EN+SIR+A  N +C
Sbjct: 135 AELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQENDKLRSENLSIREATSNAVC 194

Query: 225 TNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP------PMP 278
             CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+ +S M PP      P+P
Sbjct: 195 VGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVP 254

Query: 279 NSSLELGVGTINGFGGL-SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            SSLEL VG   G G + S+T+  +   DF   +S+++  V+ P +S    + +   I++
Sbjct: 255 GSSLELAVG---GIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDK 310

Query: 338 SMFLELALAAMDELVKMAQTDEPLWI--RSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGF 394
           S+FLELA++AMDELVKMAQ  +PLWI   S   S  ++ LN EEYL TF PCIG+KP G+
Sbjct: 311 SLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGY 370

Query: 395 VTEASRETGMVIINS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           V+EASRE+G+VII+   ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL L
Sbjct: 371 VSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLL 430

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRR 508
           M AELQVLSPLVP+REV FLRF KQ A+GVWAVVDVS D +    G     + A +NCRR
Sbjct: 431 MQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELMRDQGITSASSTANMNCRR 490

Query: 509 LPSGCVVQDMPNGYSK---------------------------VTWVEHAEYDESQVHQL 541
           LPSGCV+QD PNG+ K                           VTWVEH EYDE+ VH L
Sbjct: 491 LPSGCVLQDTPNGFVKYLVQISVFSEVYNLSIDQFLDLPPAFMVTWVEHTEYDEASVHPL 550

Query: 542 YKPLIISGMGFGAQRWVATLQRQCECLAILMST-SVSARDHTGIY 585
           Y+PL+ SG+  GA RW+ATLQRQCECLA+LMS+ ++   D + I+
Sbjct: 551 YRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIH 595


>gi|187611422|sp|Q7Y0V7.2|ROC6_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC6; AltName:
           Full=GLABRA 2-like homeobox protein 6; AltName:
           Full=HD-ZIP protein ROC6; AltName: Full=Homeodomain
           transcription factor ROC6; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 6
          Length = 872

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 347/621 (55%), Positives = 433/621 (69%), Gaps = 55/621 (8%)

Query: 1   MSFGGFLENNISTSSGGGGARIVADISYTNNDNNNNNNMPTTTTLAHPRLLSSTPQPLSK 60
           MSFGG  +       G G      D          +N+          RLL + P P   
Sbjct: 1   MSFGGMFD-------GAGSGVFSYDAGGGGGGGGVHNS----------RLLPTPPVPKPG 43

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR-----RSREDLLEHESRSGS 115
             F +PGLSL LQ  +    G  +  L  MG    G  G      R RE+  E++SRSGS
Sbjct: 44  GGFAAPGLSLGLQTMDGSQLGDVNRSLAMMGNGGSGSGGDGDSLGRGREE--ENDSRSGS 101

Query: 116 DNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           DN+DGASGD+LD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL L
Sbjct: 102 DNLDGASGDELDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNL 161

Query: 174 ETRQVKFWFQNRRTQMK-TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           E+RQVKFWFQNRRTQMK TQ+ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A+
Sbjct: 162 ESRQVKFWFQNRRTQMKQTQIERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAV 221

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT 288
           +G++SLEEQHLRIENARLKDELDRVCALAGKFLGRP+SS+  P  P+    S LELGVG+
Sbjct: 222 LGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPSLQACSGLELGVGS 281

Query: 289 ---INGFGGLSSTVTTTLPADFG--TGISNALPVVMPPNRSGPGVTGLDRSIE------- 336
                     +S    ++P   G  +G++   PV     R   G+ GLD ++        
Sbjct: 282 NGGFGLGALGASAAMQSIPDLMGGSSGLTGG-PVGSAAMRLPAGIGGLDGAMHAAAADGG 340

Query: 337 ---RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
              R++ LELALAAMDELVK+AQ DEPLW+ S +G G + LN++EY R F   +G  P G
Sbjct: 341 AIDRAVLLELALAAMDELVKVAQMDEPLWLPSLDG-GFETLNYDEYHRAFARVVGQCPAG 399

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           +V+EA+RE+G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QL
Sbjct: 400 YVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQL 459

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-------DTIRETSGAPAFVNC 506
           MHAELQVLSPLVP+REV FLRFCKQHAEG+WAVVDVS+             S + +++ C
Sbjct: 460 MHAELQVLSPLVPIREVVFLRFCKQHAEGLWAVVDVSVDAVLRPDQNGGGGSSSSSYMGC 519

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           R LP+GC+VQDM NGYSKVTWV HAEYDE+  HQLY+PL+ SG   GA+RW+A+LQRQC+
Sbjct: 520 RLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQ 579

Query: 567 CLAILMSTSVSARDHTGIYDI 587
            LAIL S S+ ARDH  I  +
Sbjct: 580 YLAILCSNSLPARDHAAITPV 600


>gi|326523973|dbj|BAJ96997.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 774

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 297/475 (62%), Positives = 367/475 (77%), Gaps = 17/475 (3%)

Query: 112 RSGSDNMDGASGDDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           R GSDN+DGASGDDLD  ++ PRKK  RYHRHTPQQIQELE++FKECPHPDEKQR+ELS+
Sbjct: 20  RPGSDNLDGASGDDLDPDNSNPRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSR 79

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RL LE+RQVKFWFQNRRTQMKTQ+ERHEN+LLRQENDKLR ENM+IR+AMR+P C NCGG
Sbjct: 80  RLNLESRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRTENMTIREAMRSPTCGNCGG 139

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM----GPPPMPNSSLELG 285
            A++G++SLEEQHLRIEN+RLKDELDRVCALAGKFLGRPVS++      P    S L+L 
Sbjct: 140 AAVLGEVSLEEQHLRIENSRLKDELDRVCALAGKFLGRPVSAISSPLSLPSSLCSGLDLA 199

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNA-LPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
           VG+ NGF G+      ++P   G G +   LP  M       G+ G   SI+R   LEL 
Sbjct: 200 VGSNNGFMGMG---MQSIPDLMGGGSAAMRLPAGMMGGGLDDGLGGEGVSIDRGALLELG 256

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           LAAM+ELVK+ Q D+PLW  S E  G + LN++EY R F   +G  P G+V+EA+RE G+
Sbjct: 257 LAAMEELVKVTQVDDPLWQPSLE-IGIETLNYDEYRRAFARVLGPSPAGYVSEATREVGI 315

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
            IINS+ LV +LM+  RW+EMFPC++AR +T ++ISSGMGGTR+G++QLM AELQVLSPL
Sbjct: 316 AIINSVDLVNSLMNEARWSEMFPCVVARASTMEIISSGMGGTRSGSIQLMRAELQVLSPL 375

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVNCRRLPSGCVVQDM 518
           VP+REV FLRFCKQHA+G+WA+VDVS+D +         +G   ++ CR LPSGC+V+DM
Sbjct: 376 VPIREVTFLRFCKQHADGLWAIVDVSVDGVLRPDSGAGGAGPAGYMGCRLLPSGCIVEDM 435

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
            NGY+KVTWV HAEYDE+ VH+LY+PL+ SG   GA+RW+A+LQRQCE  AIL S
Sbjct: 436 QNGYAKVTWVVHAEYDEAAVHELYRPLLRSGQALGARRWLASLQRQCEYHAILCS 490


>gi|109729922|tpg|DAA05775.1| TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens]
          Length = 799

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/477 (58%), Positives = 365/477 (76%), Gaps = 15/477 (3%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E+ESRSGSDNM+G SGD+ D  +N PRKKRYHRHTP+QIQE+E LFKECPHPD+KQR +L
Sbjct: 87  EYESRSGSDNMEGGSGDE-DPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDKQRQQL 145

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE RQVKFWFQNRRTQMK Q ER ENS+LR EN+KLR+EN+ +R+A++NP C +C
Sbjct: 146 SRDLGLEPRQVKFWFQNRRTQMKAQTERAENSMLRSENEKLRSENLIMREALKNPQCPHC 205

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVG 287
           GGPA +G+++ +EQ LRIEN RLK+ELDRV ALA K+LGRP++ M P  +P+SSL+L VG
Sbjct: 206 GGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPITPMAPLALPSSSLDLQVG 265

Query: 288 TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAA 347
             + FGG+        PA     +     V     R G G+T      E+ M +ELA+ A
Sbjct: 266 GGSSFGGMH-------PAPGNLDVVAGPSVADVATRPG-GLT----EAEKPMVVELAVTA 313

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
           M+ELV+MAQT+EPLW+   E  G++ LN+EEY+R F   IG+ P G  TEA+RET +V++
Sbjct: 314 MEELVRMAQTEEPLWVNMGE-VGKEQLNYEEYMRQFPRGIGMCPPGLKTEATRETALVMM 372

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           N + LVETLMD  +W +MFPC+++R  T DV+++G+ G RNGALQLM+AELQVLSPLVP 
Sbjct: 373 NGVNLVETLMDATQWMDMFPCIVSRALTVDVLATGVTGNRNGALQLMYAELQVLSPLVPT 432

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           RE+ FLR+CKQHAEGVWAVVDVS+D++R+    P+ + CRR PSG ++QD PNGY+KVT 
Sbjct: 433 REIYFLRYCKQHAEGVWAVVDVSVDSLRDNP-PPSLMRCRRRPSGVLIQDTPNGYAKVTC 491

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           VEH EYD+  VH++Y+ L+ +GM FGAQRW+ATLQRQCE LA L+++++++RD  G+
Sbjct: 492 VEHMEYDDRAVHRMYRDLVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLGGV 548


>gi|109729926|tpg|DAA05777.1| TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens]
          Length = 799

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/477 (58%), Positives = 364/477 (76%), Gaps = 16/477 (3%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E+ESRSGSDNM+G SGD+ D  +N PRKKRYHRHTP+QIQE+E LFKECPHPD+KQR +L
Sbjct: 88  EYESRSGSDNMEGGSGDE-DPDNNHPRKKRYHRHTPRQIQEMEMLFKECPHPDDKQRQQL 146

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           SK L LE RQVKFWFQNRRTQMK Q ER ENS+LR EN+K+R+EN+ +R+A++NP C +C
Sbjct: 147 SKDLGLEPRQVKFWFQNRRTQMKAQTERAENSMLRAENEKVRSENLIMREALKNPQCPHC 206

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVG 287
           GGPA +G+++ +EQ LRIEN RLK+ELDRV ALA K+LGRP++ M P  +P+SSL+L VG
Sbjct: 207 GGPATVGEMTFDEQQLRIENVRLKEELDRVSALAAKYLGRPITPMAPLALPSSSLDLQVG 266

Query: 288 TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAA 347
             + FGG+  T       D   G S A     P         GL  + E+ M +ELA+ A
Sbjct: 267 GGSSFGGMHPTPGNL---DLVAGPSVADVATRP--------GGLTEA-EKPMVVELAMMA 314

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
           M+ELV+MAQ +EPLW+     SG+  LN++EY+R F   IG++P+G   EA+RET +V++
Sbjct: 315 MEELVRMAQAEEPLWLSM--DSGKAQLNYDEYMRQFPRGIGMRPSGLKPEATRETALVMM 372

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           N + LVETLMD  +W +MFPCM++R  T DV+S+G+ G RNGALQLM+AELQVLSPLVP 
Sbjct: 373 NGVNLVETLMDATQWMDMFPCMVSRALTVDVLSTGVTGNRNGALQLMYAELQVLSPLVPT 432

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           RE+ FLR+CKQHAEGVWAVVDVS+D++R+    P+ + CRR PSG ++QD PNGY+KVT 
Sbjct: 433 REIYFLRYCKQHAEGVWAVVDVSVDSLRDNP-PPSLMRCRRRPSGVLIQDTPNGYAKVTC 491

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           VEH EYD+  VH++Y+ L+ +GM FGAQRW+ATLQRQCE LA L+++++++RD  G+
Sbjct: 492 VEHMEYDDRAVHRMYRELVNTGMAFGAQRWLATLQRQCERLASLLASNIASRDLGGV 548


>gi|109729928|tpg|DAA05778.1| TPA_inf: class IV HD-Zip protein HDZ44 [Physcomitrella patens]
          Length = 809

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/578 (52%), Positives = 398/578 (68%), Gaps = 49/578 (8%)

Query: 26  ISYTNNDNNNNNNMPTTTTLAHPRL---LSSTPQPLSKSMFNSPGLSLALQQPNIDNQGG 82
           +  T N N           +A PR    L S P P     + SP LSLA     +D Q  
Sbjct: 8   VQVTPNGNLGGRGFAELGGMAPPRPIPPLISRPPP---KHYTSPSLSLA-PPSAMDRQ-- 61

Query: 83  GDLQLQRMGESFEGIIGR----------RSREDLLEHESRSGSDNMDGASGDDLDAADNP 132
                + +G+S E  + +          +++E+  E+ SRSGSDNM+G S DD DA D+P
Sbjct: 62  -----REIGQSAESELQQQQQQQQQQQQKNKEE--EYGSRSGSDNMEGGSDDDQDA-DHP 113

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PRKKRYHRHTP+QIQE+E +FKECPHPD+KQR +LSK L L  RQVKFWFQNRRTQMK Q
Sbjct: 114 PRKKRYHRHTPRQIQEMEMIFKECPHPDDKQRQQLSKDLGLAPRQVKFWFQNRRTQMKAQ 173

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            ER ENSLLR EN+K+RAEN+ +R+A+R   C +C  PA +G++SL+EQ LR+EN RLK+
Sbjct: 174 TERAENSLLRAENEKVRAENVIMREALRKTQCPHCSVPATVGEMSLDEQQLRVENVRLKE 233

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP--ADFGTG 310
           ELDRV ALA K+LGRP++ MGP  + +SSLEL VG     G LS     +    AD   G
Sbjct: 234 ELDRVSALAAKYLGRPIAGMGPVGVGSSSLELQVG-----GWLSGVQAGSAGGNADMVQG 288

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
            S A     P         GL  + E+ M +ELA+AAM+ELV+M Q +EPLW+R+  G G
Sbjct: 289 PSVAEVATRP--------GGLTEA-EKPMVVELAVAAMEELVRMVQAEEPLWVRAG-GGG 338

Query: 371 RQVLNHEEYLRTFTPCI----GLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           R+ LN+EEY+R F   +    G+KP G  TEASRET +V++N + LVETL+D ++WAEMF
Sbjct: 339 REELNYEEYVRQFPRVVGMGMGMKPAGLRTEASRETALVMMNGVNLVETLLDASQWAEMF 398

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
           PC+++R  T +V+S+G+ G RNGALQLM+AELQVLSPLVP REV FLR+CKQHAEGVW V
Sbjct: 399 PCVVSRAVTVEVLSTGVAGNRNGALQLMYAELQVLSPLVPTREVYFLRYCKQHAEGVWGV 458

Query: 487 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           VDVS++++R+    P+ + CRR PSG ++QD PNGY++VT VEHAEYD+  VH++YK L+
Sbjct: 459 VDVSVESLRDNP-PPSLMRCRRRPSGVLIQDTPNGYARVTCVEHAEYDDRAVHRMYKELV 517

Query: 547 ISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            SGM FGAQRWVATL+RQCE +A L++++++ RD  G+
Sbjct: 518 GSGMAFGAQRWVATLERQCERVASLLASNIAPRDLGGV 555


>gi|109729924|tpg|DAA05776.1| TPA_inf: class IV HD-Zip protein HDZ42 [Physcomitrella patens]
          Length = 794

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/542 (54%), Positives = 390/542 (71%), Gaps = 29/542 (5%)

Query: 48  PRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLL 107
           P L+S  P  L    + SP LSLA     +D Q       +   ++ E    ++++E+  
Sbjct: 34  PPLMSRPPPKL----YTSPALSLA-PPTGVDRQ-------REASQTAESEQQQKNKEE-- 79

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E+ SRSGSDNM+G S DD D    P RKKRYHRHTP+QIQE+E LFKECPHPD+KQR +L
Sbjct: 80  EYGSRSGSDNMEGGSDDDQDPDRPP-RKKRYHRHTPRQIQEMEMLFKECPHPDDKQRQQL 138

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           SK L LE RQVKFWFQNRRT MK Q ER ENS+LR EN+KLR+EN+ +R+A++NP C +C
Sbjct: 139 SKDLGLEPRQVKFWFQNRRTHMKAQTERAENSMLRAENEKLRSENVIMREALKNPQCPHC 198

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVG 287
           GGPA +G++S +EQ LR+EN RLK+ELDRV ALA K+LGRP+  M P  +P+SSL+L VG
Sbjct: 199 GGPATVGEMSFDEQQLRLENVRLKEELDRVSALAAKYLGRPIPPMAPLALPSSSLDLQVG 258

Query: 288 T-INGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALA 346
              + FGGL       L    G  +++          + PG  GL  + E+ M +ELA+ 
Sbjct: 259 AGGSSFGGLHPAQAGNLSMVQGPSVADVA--------TRPG--GLTEA-EKPMVVELAMM 307

Query: 347 AMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVI 406
           AM+ELV+MAQ++EPLW+R+ E SGR+ LN++EYLR     IG+KP G  TE +RET MV+
Sbjct: 308 AMEELVRMAQSEEPLWVRTPE-SGREQLNYDEYLRQSPRGIGMKPPGLKTEVTRETAMVM 366

Query: 407 INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVP 466
           +N + LVETLMD  +W +M+PCM++R  T DV+S+G+ G RNGALQLM+AELQVLSPLVP
Sbjct: 367 MNGVNLVETLMDATQWIDMYPCMVSRALTVDVLSTGVAGNRNGALQLMYAELQVLSPLVP 426

Query: 467 VREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVT 526
            RE+ FLR+CKQHAEGVWAVVDVS++++R+    P+ + CRR PSG ++QD PNGY+KVT
Sbjct: 427 TREIYFLRYCKQHAEGVWAVVDVSVESLRDNP-PPSLMRCRRRPSGILIQDTPNGYAKVT 485

Query: 527 WVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYD 586
            VEH EYD+  VH++Y+ L+ SGM FGAQRW+ATLQRQCE LA L+++++++RD  G+  
Sbjct: 486 CVEHMEYDDRAVHRMYRELVNSGMAFGAQRWMATLQRQCERLASLLASNIASRDLGGVPS 545

Query: 587 IN 588
            N
Sbjct: 546 AN 547


>gi|33355392|gb|AAQ16126.1| homeodomain protein BNLGHi6313 [Gossypium hirsutum]
          Length = 788

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 287/505 (56%), Positives = 358/505 (70%), Gaps = 26/505 (5%)

Query: 86  QLQRMGESFE-GIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADN---PPRKKRYHRH 141
           +L+ +GE+++ G IG    +D         SD+ +GA G+D D ADN   P +KK++HRH
Sbjct: 50  ELRLIGENYDPGFIGMMKEDD-----GYGSSDDFEGALGNDQDTADNGRPPKKKKKFHRH 104

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
            P QI ELES FKECPHPDEKQR ELS+RL LE++Q+KFWFQNRRTQMKTQLERHEN  L
Sbjct: 105 NPHQIHELESFFKECPHPDEKQRRELSRRLALESKQIKFWFQNRRTQMKTQLERHENVFL 164

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALA 261
           +QENDKLRAEN  +R A+ + IC NCG PA+  +IS E   L IEN+RLKDEL+R  AL 
Sbjct: 165 KQENDKLRAENDLLRQAIASAICNNCGVPAVPDEISYEPSQLMIENSRLKDELNRARALT 224

Query: 262 GKFLGRPVSSMGPPPMP------NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
            KFLGR +SS    P P      NS++E+ V    GF GL++  + +LP  F  G    +
Sbjct: 225 NKFLGRHLSSSSANPSPSPSQGLNSNVEVVVRR-TGFCGLNNG-SISLPMGFEFGHGATM 282

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
           P++ P           +   ++S  +++ALAAMDEL+KMAQ   PLWI+ F G G + LN
Sbjct: 283 PLMNPS-------FAYEMPYDKSALVDVALAAMDELIKMAQMGNPLWIKGF-GDGMETLN 334

Query: 376 HEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
            EEY RTF+  IG+KP+GF TEA+RET MV +  LALV+TLMD NRWAEMFPCMI+R  T
Sbjct: 335 LEEYKRTFSSFIGMKPSGFTTEATRETAMVPLRGLALVDTLMDANRWAEMFPCMISRAVT 394

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR 495
            DV+SSG G TR+ ALQLM AE QVLSPLVP+R+V F+RFCKQH++ VWA+VDVSI+ + 
Sbjct: 395 IDVLSSGKGVTRDNALQLMEAEFQVLSPLVPIRQVQFIRFCKQHSDSVWAIVDVSIN-LS 453

Query: 496 ETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQ 555
             + A  F NCRRLPSGCV+QDM N YSKVTWVEH+EYDES VH L++PL+ SG GFGAQ
Sbjct: 454 NAANALMFANCRRLPSGCVIQDMDNKYSKVTWVEHSEYDESTVHHLFRPLLSSGFGFGAQ 513

Query: 556 RWVATLQRQCECLAILMSTSVSARD 580
           RW+ATL+RQ   LA LMS  +   D
Sbjct: 514 RWIATLRRQYSSLAQLMSPDIHGED 538


>gi|297741089|emb|CBI31820.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/478 (56%), Positives = 341/478 (71%), Gaps = 74/478 (15%)

Query: 109 HESRSGSDNMDGASGDDLD--AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLE 166
           +ES SGS N+DG   D+ +    + P +K +YHRHT +QI ELE+ FKE PHPDEKQRL+
Sbjct: 9   YESMSGSGNLDGGLEDEQETLVLERPAKKLKYHRHTQEQINELETCFKEWPHPDEKQRLD 68

Query: 167 LSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN 226
           LS++L LE RQVKFWFQNRRTQMK QLERHEN +LRQENDKLR EN++I+DA+RNPIC +
Sbjct: 69  LSRKLNLEPRQVKFWFQNRRTQMKNQLERHENVMLRQENDKLRVENVAIKDAVRNPICNH 128

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP---PMPNSSLE 283
           CGG A++G+I++EE  LR+ENA+L+DEL R+C LA KFLGRPV+ +  P   P P+S+LE
Sbjct: 129 CGGVAMLGNITIEENQLRVENAQLRDELSRICGLAEKFLGRPVTPLASPIALPRPSSNLE 188

Query: 284 LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
           L V                     G G                           S+F+EL
Sbjct: 189 LEVA--------------------GNG---------------------------SVFVEL 201

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
           A+ AMDEL+++AQ D P+W+ S +G G++ LN                      ASRETG
Sbjct: 202 AVTAMDELLRLAQADSPIWMTSLDG-GKETLN---------------------PASRETG 239

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSP 463
           MV+INSLALVETLMD +RWA+MFPC+IA+ +TTDV+SSG+G TR+GALQLMHAELQVLSP
Sbjct: 240 MVMINSLALVETLMDGSRWAQMFPCVIAKASTTDVLSSGIGRTRHGALQLMHAELQVLSP 299

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
           LVPVR+V FLRFCKQH EG+WAVVDVSIDT  + +   +FVNCRRL SGCVVQD+ NGY+
Sbjct: 300 LVPVRQVKFLRFCKQHGEGLWAVVDVSIDTALDGASINSFVNCRRLLSGCVVQDLSNGYT 359

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
           +VTW+EH+EYDES VH LY+ L+ SG+GFGA RW+ATLQRQCE +AIL+S++V   DH
Sbjct: 360 RVTWIEHSEYDESAVHYLYRSLLSSGLGFGALRWLATLQRQCESIAILLSSTVPCEDH 417


>gi|242076842|ref|XP_002448357.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
 gi|241939540|gb|EES12685.1| hypothetical protein SORBIDRAFT_06g025750 [Sorghum bicolor]
          Length = 817

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/469 (58%), Positives = 338/469 (72%), Gaps = 34/469 (7%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-- 191
           RK+RY+RHTP QI  LE++FKE PHPDEKQR ELSK+L LE RQVKFWFQNRRT  K   
Sbjct: 102 RKRRYNRHTPHQIARLEAMFKEFPHPDEKQRAELSKQLGLEPRQVKFWFQNRRTNAKCLT 161

Query: 192 -------------QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
                        Q+ER EN+ L+QENDKLR EN+SIR+AMR+ +C+ CGGPA++GD+SL
Sbjct: 162 WLSLLHGPEPGKNQMERQENARLKQENDKLRVENLSIREAMRDLVCSGCGGPAVLGDLSL 221

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG-------PPPMPNSSLELGVGTING 291
           EE+HLR+ENARL+DEL RVC L  KF+G+P+S M        P PMP SSLEL V    G
Sbjct: 222 EERHLRLENARLRDELARVCTLTAKFIGKPMSHMELLAVAEEPHPMPGSSLELAVAGGVG 281

Query: 292 FGGLSSTVTTTLPADFGTGISNALPVVMPP--NRSGPGVTGLDRSIERSMFLELALAAMD 349
            G  SS +  +  ++     S+A+  V+ P    S P V     SI++S F +LA++AM+
Sbjct: 282 SGVPSSKMPVSTISELAGSTSSAMGTVITPMVTASLPMV-----SIDKSKFAQLAVSAMN 336

Query: 350 ELVKMAQTDEPLWIRSFEGSGR---QVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVI 406
           ELVKMAQT+EPLWI S    G    + LN +EYL+ FTPC+G+K NGFV+EASRE+G+V 
Sbjct: 337 ELVKMAQTNEPLWIPSASSPGSPTMETLNFKEYLKAFTPCVGVKRNGFVSEASRESGIVT 396

Query: 407 INS-LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           ++S  ALVE  MD  RW++MF C++A+ AT + IS G+ G+RNGAL LM AELQVLSPLV
Sbjct: 397 VDSSAALVEAFMDERRWSDMFSCIVAKAATIEEISPGVAGSRNGALLLMQAELQVLSPLV 456

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
           P+REV FLRFCKQ AE  WAVVDVSID ++          CRRLPSGCV+QD PNG  KV
Sbjct: 457 PIREVTFLRFCKQLAESAWAVVDVSIDGLQMDHCLATNTKCRRLPSGCVLQDTPNG-CKV 515

Query: 526 TWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           TWVEHAEY E+ VHQLY+PL+ SG+  GA RW+ATLQRQCECLAILMS+
Sbjct: 516 TWVEHAEYPEASVHQLYQPLLCSGLALGAGRWLATLQRQCECLAILMSS 564


>gi|302813433|ref|XP_002988402.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
 gi|300143804|gb|EFJ10492.1| hypothetical protein SELMODRAFT_450553 [Selaginella moellendorffii]
          Length = 817

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/560 (50%), Positives = 384/560 (68%), Gaps = 42/560 (7%)

Query: 38  NMPTTTTLAHPRLLSSTPQ--------PLSKSMFNSPGLSLALQQPNI-DNQGGGDLQLQ 88
           NMP    +A PRL+  +P           +    +SPGL+L L  P+I D +  G     
Sbjct: 31  NMPAGA-MAAPRLIPPSPSMPRRGNGGGGANIYSSSPGLTLGL--PSIVDGRQQGGAGAG 87

Query: 89  RMGESFEGIIGR----RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQ 144
                 +  IG      S+    E+ESRSGSDNMDG+ G+D D  + PPRKKRYHRHTP 
Sbjct: 88  DGDAQNQSGIGAPMKLSSKNKDEEYESRSGSDNMDGSGGEDQD--NEPPRKKRYHRHTPH 145

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 204
           QIQE+E+LFKECPHPD+KQR ELS+ L LE RQVKFWFQNRRTQ+K Q ER ENS+LR E
Sbjct: 146 QIQEMEALFKECPHPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLE 205

Query: 205 NDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKF 264
            +KLRAEN+++R+A++N  C +CGGPA +G++S +EQ LRIENARLKDELDRV  LA K+
Sbjct: 206 IEKLRAENVTMREAIKNASCPSCGGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKY 265

Query: 265 LGRPVSSM--GPPPMPNSSLELGVGTINGF--GGLSSTVTTTLPADFGTGISNALPVVMP 320
           LGRP+  +  G    P+SSL+L VG    F  GG ++          G+ +S     + P
Sbjct: 266 LGRPIPHLSGGGSQAPSSSLDLAVGGAANFHQGGAAAA---------GSLVSAGSESMRP 316

Query: 321 PNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYL 380
                    GL  + ++ M ++LA+ AM+EL ++ Q +EP WI S +G  ++VLN++EY+
Sbjct: 317 --------GGLSEA-DKPMIVDLAVTAMEELYRLCQPEEPSWIPSPDGP-KEVLNYDEYI 366

Query: 381 RTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVIS 440
           R +   +G +P G  TEA+RE+ +V++N + LVE LMD  +WAE+FP +++R  T DV++
Sbjct: 367 RQYQSALGPRPYGMRTEATRESDLVMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLA 426

Query: 441 SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA 500
           +G+ G RNGA+QLM+AE+QVLSPLVP RE  F+R+CKQHA+GVW +VDVS+D +   + A
Sbjct: 427 TGVTGNRNGAVQLMYAEMQVLSPLVPTREFYFVRYCKQHADGVWGIVDVSVDALAREA-A 485

Query: 501 PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 560
           P+   CRR PSG ++QDMPNGYSKVT +EH EYD+  V+++YKP + SG+ FGAQRW+ T
Sbjct: 486 PSSNRCRRRPSGYLIQDMPNGYSKVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLT 545

Query: 561 LQRQCECLAILMSTSVSARD 580
           LQRQCE LA L++TS+SARD
Sbjct: 546 LQRQCERLASLLATSISARD 565


>gi|302794502|ref|XP_002979015.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
 gi|300153333|gb|EFJ19972.1| hypothetical protein SELMODRAFT_450554 [Selaginella moellendorffii]
          Length = 786

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/477 (55%), Positives = 353/477 (74%), Gaps = 26/477 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E+ESRSGSDNMDG+ G+D D  + PPRKKRYHRHTP QIQE+E+LFKECPHPD+KQR EL
Sbjct: 80  EYESRSGSDNMDGSGGEDQD--NEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQRQEL 137

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE RQVKFWFQNRRTQ+K Q ER ENS+LR E +KLRAEN+++R+A++N  C +C
Sbjct: 138 SRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIKNASCPSC 197

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELG 285
           GGPA +G++S +EQ LRIENARLKDELDRV  LA K+LGRP+  +  G    P+SSL+L 
Sbjct: 198 GGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAPSSSLDLA 257

Query: 286 VGTINGF--GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
           VG    F  GG ++          G+ +S     + P         GL  + ++ M ++L
Sbjct: 258 VGGAANFHQGGAAAA---------GSLVSAGSESMRP--------GGLSEA-DKPMIVDL 299

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
           A+ AM+EL ++ Q +EP WI S +G  ++VLN++EY+R +   +G +P G  TEA+RE+ 
Sbjct: 300 AVTAMEELYRLCQPEEPSWIPSPDGP-KEVLNYDEYIRQYQSALGPRPYGMRTEATRESD 358

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSP 463
           +V++N + LVE LMD  +WAE+FP +++R  T DV+++G+ G RNGA+QLM+AE+QVLSP
Sbjct: 359 LVMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSP 418

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
           LVP RE  F+R+CKQHA+GVW +VDVS+D +   + AP+   CRR PSG ++QDMPNGYS
Sbjct: 419 LVPTREFYFVRYCKQHADGVWGIVDVSVDALAREA-APSSNRCRRRPSGYLIQDMPNGYS 477

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           KVT +EH EYD+  V+++YKP + SG+ FGAQRW+ TLQRQCE LA L++TS+SARD
Sbjct: 478 KVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARD 534


>gi|12002853|gb|AAG43405.1|AF172931_1 homeobox 1 [Picea abies]
          Length = 763

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/519 (53%), Positives = 365/519 (70%), Gaps = 34/519 (6%)

Query: 65  SPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGD 124
           S GLSLA  QPN+     G   + +  +S    I    RE+  E ES+SGSDN++GASG+
Sbjct: 27  SSGLSLA--QPNM---AEGQFDMSQTADSEIAKI----REE--EFESKSGSDNVEGASGE 75

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D D  +  PRKKRYHRHT  QIQE+E  FKECPHPD+KQR ELS+ L LE  QVKFWFQN
Sbjct: 76  DQDG-ERRPRKKRYHRHTQHQIQEMEMFFKECPHPDDKQRKELSRELGLEPLQVKFWFQN 134

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           +RTQMKTQ ERHEN+ LR EN+KLR+ENM  R+A+ N  C NCGGPA +G++S +EQ LR
Sbjct: 135 KRTQMKTQHERHENTQLRSENEKLRSENMRYREALNNASCPNCGGPAALGEMSFDEQQLR 194

Query: 245 IENARLKDELDRVCALAGKFLGRPVSSMGPPPM---PNSSLELGVGTINGFGGLSSTVTT 301
           +ENARL++E+DR+  +A K++G+P+ S GP P+   P S+L+L VG+     G+   +  
Sbjct: 195 MENARLREEIDRISGIAAKYVGKPLLSFGPSPLSSIPRSNLDLAVGSY----GVQPNIG- 249

Query: 302 TLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPL 361
             P  +G+     +      NRS  G T      E+ M +ELA+AAM+ELV+MAQ  EPL
Sbjct: 250 --PDIYGSSSGGEI-----GNRSLVGPT----EGEKPMVVELAVAAMEELVRMAQLGEPL 298

Query: 362 WIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
           W    E S   +LN +EY+RTF   IG +P G   EASRET +VI+N++ LVETLMD N+
Sbjct: 299 WTSHPEDS-TDILNEDEYIRTFPRGIGPRPYGLKAEASRETAVVIMNAINLVETLMDVNQ 357

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W+ MFP +++R  T DV S+G+ G  NGALQ+MHAE QV SPLVP RE+ F+R+CKQH++
Sbjct: 358 WSSMFPGIVSRPFTVDVFSTGVAGNYNGALQVMHAEFQVPSPLVPTREIYFVRYCKQHSD 417

Query: 482 GVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQL 541
            +WAVVDVS+D++R  S   + + CRR PSGC++Q+MPN YSKVTWVEH E D+  VH +
Sbjct: 418 SIWAVVDVSLDSLRGNSS--SVIRCRRRPSGCLIQEMPNSYSKVTWVEHVEADDRAVHHI 475

Query: 542 YKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           Y+ L+ SGM FGA+RW+ATLQRQCE LA ++++++ ARD
Sbjct: 476 YRQLVNSGMAFGAKRWIATLQRQCERLASVLASNIPARD 514


>gi|109729920|tpg|DAA05774.1| TPA_inf: class IV HD-Zip protein HDZ44 [Selaginella moellendorffii]
          Length = 786

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/477 (55%), Positives = 353/477 (74%), Gaps = 26/477 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E+ESRSGSDNMDG+ G+D D  + PPRKKRYHRHTP QIQE+E+LFKECPHPD+KQR EL
Sbjct: 80  EYESRSGSDNMDGSGGEDQD--NEPPRKKRYHRHTPHQIQEMEALFKECPHPDDKQRQEL 137

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE RQVKFWFQNRRTQ+K Q ER ENS+LR E +KLRAEN+++R+A++N  C +C
Sbjct: 138 SRELGLEPRQVKFWFQNRRTQLKAQQERAENSMLRLEIEKLRAENVTMREAIKNASCPSC 197

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELG 285
           GGPA +G++S +EQ LRIENARLKDELDRV  LA K+LGRP+  +  G    P+SSL+L 
Sbjct: 198 GGPATLGEMSYDEQQLRIENARLKDELDRVSTLAAKYLGRPIPHLSGGGSQAPSSSLDLA 257

Query: 286 VGTINGF--GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
           VG    F  GG ++          G+ +S     + P         GL  + ++ M ++L
Sbjct: 258 VGGAANFHQGGAAAA---------GSLVSAGSESMRP--------GGLSEA-DKPMIVDL 299

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
           A+ AM+EL ++ Q +EP WI S +G  ++VLN++EY+R +   +G +P G  TEA+RE+ 
Sbjct: 300 AVTAMEELYRLCQPEEPSWIPSPDGP-KEVLNYDEYIRQYQSALGPRPYGMRTEATRESD 358

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSP 463
           +V++N + LVE LMD  +WAE+FP +++R  T DV+++G+ G RNGA+QLM+AE+QVLSP
Sbjct: 359 LVMMNGVNLVELLMDSAKWAEIFPSIVSRAVTIDVLATGVTGNRNGAVQLMYAEMQVLSP 418

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
           LVP RE  F+R+CKQHA+GVW +VDVS+D +   + AP+   CRR PSG ++QDMPNGYS
Sbjct: 419 LVPTREFYFVRYCKQHADGVWGIVDVSVDALAREA-APSSNRCRRRPSGYLIQDMPNGYS 477

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           KVT +EH EYD+  V+++YKP + SG+ FGAQRW+ TLQRQCE LA L++TS+SARD
Sbjct: 478 KVTVLEHVEYDDRSVNRIYKPYVNSGLAFGAQRWLLTLQRQCERLASLLATSISARD 534


>gi|224069018|ref|XP_002302880.1| predicted protein [Populus trichocarpa]
 gi|222844606|gb|EEE82153.1| predicted protein [Populus trichocarpa]
          Length = 756

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 263/513 (51%), Positives = 347/513 (67%), Gaps = 31/513 (6%)

Query: 70  LALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAA 129
           LAL QPN+  +G     L     + EG + R   E+     ++SGS+N +GASGDD D  
Sbjct: 26  LALGQPNM-MEGHEFHHLDMTHNTSEGDMTRIRDEEFDSTNTKSGSENQEGASGDDQDPR 84

Query: 130 DNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
              P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQM
Sbjct: 85  ---PKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQM 141

Query: 190 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENAR 249
           KTQ ERHEN+ LR EN+KLRA+NM  R+A+ N  C NCGGP  IG++S +E HLR+EN R
Sbjct: 142 KTQHERHENTQLRNENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENTR 201

Query: 250 LKDELDRVCALAGKFLGRPVSS--MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADF 307
           L++E+DR+ A+A +++G+PV +  +  PPMP   ++LGVG   G  GL   +        
Sbjct: 202 LREEIDRISAIAARYVGKPVVNYPVLSPPMPPRPVDLGVGNFGGQPGLGGDIYEA----- 256

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFE 367
                + L  +  P  +           ++ M +ELA+AAM+EL++MAQ DEPLW+ S +
Sbjct: 257 ----GDLLRSISAPTEA-----------DKPMIIELAVAAMEELIRMAQMDEPLWMNSLD 301

Query: 368 GSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFP 427
           G    VLN +EY+R F   IG KP GF  EASRE+ +VI+N + LVE LMD N+W+ +F 
Sbjct: 302 GID-AVLNEDEYIRIFPHGIGPKPTGFKCEASRESAVVIMNHINLVEYLMDVNQWSTLFS 360

Query: 428 CMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVV 487
            +++R  T +V+S+G+ G  NGALQ+M AE Q+ +PLVP RE  ++R+CKQHA+G WAVV
Sbjct: 361 GIVSRALTLEVLSTGVAGNYNGALQVMTAEFQLPTPLVPTRESYYVRYCKQHADGTWAVV 420

Query: 488 DVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLII 547
           DVS+D+IR    A     CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LYK L+ 
Sbjct: 421 DVSLDSIRPGPAA----RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKHLVS 476

Query: 548 SGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SG  FGA+RWVATL RQCE LA  M+T++ A D
Sbjct: 477 SGHAFGAKRWVATLNRQCERLASAMATNIPAGD 509


>gi|224128938|ref|XP_002320458.1| predicted protein [Populus trichocarpa]
 gi|222861231|gb|EEE98773.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/488 (52%), Positives = 340/488 (69%), Gaps = 30/488 (6%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFK 154
           EG + R   ++     ++SGS+N DGASGDD D     P+KKRYHRHT  QIQE+E+ FK
Sbjct: 22  EGDMARIRDDEFDSTNTKSGSENQDGASGDDQDPR---PKKKRYHRHTQHQIQEMEAFFK 78

Query: 155 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 214
           ECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM 
Sbjct: 79  ECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRNENEKLRADNMR 138

Query: 215 IRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS--M 272
            R+A+ N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV +  +
Sbjct: 139 YREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPL 198

Query: 273 GPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD 332
              PMP   L+LGVG   G  G+   +       +G G  + L  +  P  +        
Sbjct: 199 ISAPMPPRPLDLGVGNFGGQPGIGGEI-------YGAG--DLLRSITAPTEA-------- 241

Query: 333 RSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN 392
              ++ M +ELA+AAM+ELV+MAQ DEPLW+ S +G+   VL+ +EY+R F   IG KP 
Sbjct: 242 ---DKPMIIELAVAAMEELVRMAQMDEPLWMGSLDGTN-AVLDEDEYVRIFPRGIGPKPT 297

Query: 393 GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           GF  EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ
Sbjct: 298 GFKCEASRESAVVIMNHINLVEYLMDVNQWSTLFSGIVSRALTLEVLSTGVAGNYNGALQ 357

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSG 512
           +M AE Q+ +PLVP RE  F+R+CKQHA+G WAVVDVS+D +R + GA     CRR PSG
Sbjct: 358 VMTAEFQLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPGA----RCRRRPSG 413

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           C++Q+M NGYSKVTWVEH E D+  VH LYK L+ SG  FGA+RWVATL RQCE LA  M
Sbjct: 414 CLIQEMLNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAM 473

Query: 573 STSVSARD 580
           +T++ A D
Sbjct: 474 ATNIPAGD 481


>gi|147826488|emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 265/515 (51%), Positives = 352/515 (68%), Gaps = 35/515 (6%)

Query: 64  NSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASG 123
           +S GLSL   QPN+ +   G L    M ++       R RED  + +S+SGS+N +GASG
Sbjct: 27  SSSGLSLG--QPNMMD---GQLHPLDMTQNTSESEIARLRED--DFDSKSGSENHEGASG 79

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DD D  +  P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQ
Sbjct: 80  DDQDP-NQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 138

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHL 243
           N+RTQMKTQ ERHEN+ LR EN+KLR EN+  R+A+ N  C NCGGP  IG++S +E HL
Sbjct: 139 NKRTQMKTQHERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHL 198

Query: 244 RIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMPNSSLELGVGTINGFGGLSSTVTT 301
           R+ENARL++E+DR+ A+A K++G+PV +    PP +P   L+LGVG      GL   +  
Sbjct: 199 RLENARLREEIDRISAIAAKYVGKPVVNYPXIPPQVPTRPLDLGVGNFGAQPGLGGEL-- 256

Query: 302 TLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPL 361
                   G S+ L  +  P  +           ++ M +ELA+AAM+EL +MAQ  EPL
Sbjct: 257 -------FGASDLLRSINGPTEA-----------DKPMIIELAVAAMEELFRMAQMGEPL 298

Query: 362 WIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
           W+ S +G+  + L+ +EY+R+F   IG KP GF  EASRET +VI+N ++LVE LMD N+
Sbjct: 299 WLPSLDGTTTE-LSEDEYIRSFPRGIGPKPAGFKCEASRETAVVIMNHISLVEILMDVNQ 357

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W+ +F  +++R  T +V+S+G+ G  NGA Q+M AE QV SPLVP RE  F+R+CKQHA+
Sbjct: 358 WSTVFSGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHAD 417

Query: 482 GVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQL 541
           G WAVVDVS+D +R +      V CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +
Sbjct: 418 GTWAVVDVSLDNLRPS----PVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNI 473

Query: 542 YKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           YK L+ SG+ FGA+RWVATL RQCE LA  M+T++
Sbjct: 474 YKQLVNSGLAFGAKRWVATLDRQCERLASAMATNI 508


>gi|255566373|ref|XP_002524172.1| homeobox protein, putative [Ricinus communis]
 gi|223536541|gb|EEF38187.1| homeobox protein, putative [Ricinus communis]
          Length = 731

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 260/508 (51%), Positives = 345/508 (67%), Gaps = 36/508 (7%)

Query: 74  QPNIDNQGGGDLQLQRMG---ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAAD 130
           QPN+  +G    QL  +     + E  + R   E+     ++SGSDN +GASGDD D   
Sbjct: 3   QPNMLMEG----QLHHLDMTQNTSESDLARIRDEEFDSTNTKSGSDNHEGASGDDQDP-- 56

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK
Sbjct: 57  RPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 116

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
           TQ ERHEN+ LR EN+KLRA+NM  R+A+ N  C NCGGP  IG++S +E HLR+ENARL
Sbjct: 117 TQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARL 176

Query: 251 KDELDRVCALAGKFLGRPVSS--MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
           ++E+DR+ A+A K++G+PV +  +   PMP   LELGVG      G+   +       +G
Sbjct: 177 REEIDRISAIAAKYVGKPVVNYPLLSAPMPPRPLELGVGNFGAQPGIGGEM-------YG 229

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG 368
            G  + L  +  P+ +           ++ M +ELA+AAM+EL++MAQ  EPLW+ S +G
Sbjct: 230 AG--DLLRSISAPSEA-----------DKPMIIELAVAAMEELLRMAQMGEPLWMSSHDG 276

Query: 369 SGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPC 428
           +    LN +EY+R F   IG KP GF  EASRET +VI+N + LVE LMD N+W+ +F  
Sbjct: 277 TN-SALNEDEYIRIFPRGIGPKPAGFKCEASRETALVIMNHINLVEYLMDVNQWSTVFSG 335

Query: 429 MIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 488
           +++R  T +V+S+G+ G  NGALQ+M AE Q+ +PLVP RE  F+R+CKQHAEG WAVVD
Sbjct: 336 IVSRAMTLEVLSTGVAGNYNGALQVMTAEFQLPTPLVPTRESYFVRYCKQHAEGTWAVVD 395

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIIS 548
           VS+D +R +  A     CRR PSGC++Q+MPNGYS+VTW+EH E D+  VH LYK L+ S
Sbjct: 396 VSLDNLRPSPAA----RCRRRPSGCLIQEMPNGYSQVTWIEHVEVDDRGVHSLYKQLVSS 451

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSV 576
           G  FGA+RWVATL RQCE LA  M+T++
Sbjct: 452 GHAFGAKRWVATLDRQCERLASAMATNI 479


>gi|297739295|emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 264/514 (51%), Positives = 351/514 (68%), Gaps = 34/514 (6%)

Query: 64  NSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASG 123
           +S GLSL   QPN+ +   G L    M ++       R RED  + +S+SGS+N +GASG
Sbjct: 27  SSSGLSLG--QPNMMD---GQLHPLDMTQNTSESEIARLRED--DFDSKSGSENHEGASG 79

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DD D  +  P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQ
Sbjct: 80  DDQDP-NQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 138

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHL 243
           N+RTQMKTQ ERHEN+ LR EN+KLR EN+  R+A+ N  C NCGGP  IG++S +E HL
Sbjct: 139 NKRTQMKTQHERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHL 198

Query: 244 RIENARLKDELDRVCALAGKFLGRPVSSMG-PPPMPNSSLELGVGTINGFGGLSSTVTTT 302
           R+ENARL++E+DR+ A+A K++G+PV +    P +P   L+LGVG      GL   +   
Sbjct: 199 RLENARLREEIDRISAIAAKYVGKPVVNYPLIPQVPTRPLDLGVGNFGAQPGLGGEL--- 255

Query: 303 LPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW 362
                  G S+ L  +  P  +           ++ M +ELA+AAM+EL +MAQ  EPLW
Sbjct: 256 ------FGASDLLRSINGPTEA-----------DKPMIIELAVAAMEELFRMAQMGEPLW 298

Query: 363 IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
           + S +G+  + L+ +EY+R+F   IG KP GF  EASRET +VI+N ++LVE LMD N+W
Sbjct: 299 LPSLDGTTTE-LSEDEYIRSFPRGIGPKPPGFKCEASRETAVVIMNHISLVEILMDVNQW 357

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
           + +F  +++R  T +V+S+G+ G  NGA Q+M AE QV SPLVP RE  F+R+CKQHA+G
Sbjct: 358 STVFSGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADG 417

Query: 483 VWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
            WAVVDVS+D +R +      V CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +Y
Sbjct: 418 TWAVVDVSLDNLRPS----PVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIY 473

Query: 543 KPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           K L+ SG+ FGA+RWVATL RQCE LA  M+T++
Sbjct: 474 KQLVNSGLAFGAKRWVATLDRQCERLASAMATNI 507


>gi|302398865|gb|ADL36727.1| HD domain class transcription factor [Malus x domestica]
          Length = 393

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/311 (79%), Positives = 278/311 (89%), Gaps = 6/311 (1%)

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTT-TLPADFGTGISNALPVVMPPNRSGPGVTGLDR 333
           PP+P+S+LELGVG+ NGFGG+S+  T+ ++  DFG GI +A+ VV   +   P VTGLDR
Sbjct: 3   PPLPSSTLELGVGS-NGFGGMSNVATSMSMGNDFGGGIGSAMSVV---SHGRPSVTGLDR 58

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
           S+ERS+FLELALAAMDELVKMAQTDEPLW+RS EG GR+VLNHEEY+R FTPCIGLKPNG
Sbjct: 59  SMERSIFLELALAAMDELVKMAQTDEPLWLRSLEG-GREVLNHEEYMRNFTPCIGLKPNG 117

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           FV+EASRE+G VIINSL LVETLMD NRW EMFP ++ART+TTDVISSGMGGTRNGALQL
Sbjct: 118 FVSEASRESGTVIINSLTLVETLMDSNRWLEMFPGVLARTSTTDVISSGMGGTRNGALQL 177

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS+D IR+T+G P F+NCRRLPSGC
Sbjct: 178 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSVDAIRDTTGVPTFMNCRRLPSGC 237

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           VVQDMPNGYSKVTWVEHAEYDESQVH LY+PL+ SGMGFGAQRWVATLQRQ EC AILMS
Sbjct: 238 VVQDMPNGYSKVTWVEHAEYDESQVHHLYRPLLSSGMGFGAQRWVATLQRQSECQAILMS 297

Query: 574 TSVSARDHTGI 584
           + V++RDHT I
Sbjct: 298 SCVTSRDHTAI 308


>gi|8920421|emb|CAB96422.1| OCL2 protein [Zea mays]
          Length = 725

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/479 (54%), Positives = 344/479 (71%), Gaps = 18/479 (3%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           SD   G S  DLD   +  RKK Y+RH P+QI++LE++FKE  HPDEKQR +LS++L L+
Sbjct: 7   SDPKQGMSFGDLDGGGSK-RKKPYNRHAPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLD 65

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            RQVKFWFQNRRT +K QLER EN+ L+QENDKLR EN+SIR+A+R+ +C+ CGGPA++G
Sbjct: 66  PRQVKFWFQNRRTHLKNQLERQENARLKQENDKLRVENLSIREAIRDLVCSCCGGPAVLG 125

Query: 235 DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM------GPPPMPNSSLELGVGT 288
           ++S EE  LR+ENARL+DEL RVC +  KF+G+P+S M       P P+  SSLEL V  
Sbjct: 126 ELSPEEHQLRLENARLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPITGSSLELAVAV 185

Query: 289 INGFGGLSSTVTTTLPADFGTGISNALPVVMPP--NRSGPGVTGLDRSIERSMFLELALA 346
             G G  SS +  +  ++     S++   V  P    S P V+ +   I++S F +LA++
Sbjct: 186 GVGSGVPSSKMPVSTISELAGSTSSSTGTVTTPMVTASLPMVSIV---IDKSKFAQLAVS 242

Query: 347 AMDELVKMAQTDEPLWIRSFEGSGR---QVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
           AM+ELVKMA+ +EPLWI +    G    + LN +EYL+ F+PC+G+KP GFV+EASRE+G
Sbjct: 243 AMNELVKMARMNEPLWIPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESG 302

Query: 404 MVIIN-SLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           +V I+ S AL+E  MD  RW+++F C++A+ +  + I  G+ G+RNGAL LM AELQ+LS
Sbjct: 303 IVTIDSSAALMEVFMDERRWSDIFYCIVAKASIVEEILPGVAGSRNGALLLMQAELQMLS 362

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           P VP+REV FLRFCKQ AEG WAVVDVSID ++          CRRLPSGCV+QD PNG 
Sbjct: 363 PRVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLDTNTKCRRLPSGCVLQDTPNG- 421

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
            KVTWVEHAEY E+ VHQLY+PL+ SG+  GA RW+ATLQRQCECLAILMS S++A +H
Sbjct: 422 CKVTWVEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLAILMS-SLAAPEH 479


>gi|359485664|ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/510 (51%), Positives = 348/510 (68%), Gaps = 32/510 (6%)

Query: 68  LSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLD 127
           LS  + QPN+ +   G L    M ++       R RED  + +S+SGS+N +GASGDD D
Sbjct: 36  LSCYMFQPNMMD---GQLHPLDMTQNTSESEIARLRED--DFDSKSGSENHEGASGDDQD 90

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
             +  P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RT
Sbjct: 91  P-NQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRT 149

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMKTQ ERHEN+ LR EN+KLR EN+  R+A+ N  C NCGGP  IG++S +E HLR+EN
Sbjct: 150 QMKTQHERHENTQLRSENEKLRTENLRYREALSNASCPNCGGPTAIGEMSFDEHHLRLEN 209

Query: 248 ARLKDELDRVCALAGKFLGRPVSSMG-PPPMPNSSLELGVGTINGFGGLSSTVTTTLPAD 306
           ARL++E+DR+ A+A K++G+PV +    P +P   L+LGVG      GL   +       
Sbjct: 210 ARLREEIDRISAIAAKYVGKPVVNYPLIPQVPTRPLDLGVGNFGAQPGLGGEL------- 262

Query: 307 FGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF 366
              G S+ L  +  P  +           ++ M +ELA+AAM+EL +MAQ  EPLW+ S 
Sbjct: 263 --FGASDLLRSINGPTEA-----------DKPMIIELAVAAMEELFRMAQMGEPLWLPSL 309

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           +G+  + L+ +EY+R+F   IG KP GF  EASRET +VI+N ++LVE LMD N+W+ +F
Sbjct: 310 DGTTTE-LSEDEYIRSFPRGIGPKPPGFKCEASRETAVVIMNHISLVEILMDVNQWSTVF 368

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
             +++R  T +V+S+G+ G  NGA Q+M AE QV SPLVP RE  F+R+CKQHA+G WAV
Sbjct: 369 SGIVSRAMTLEVLSTGVAGNYNGAFQVMTAEFQVPSPLVPTRESYFVRYCKQHADGTWAV 428

Query: 487 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           VDVS+D +R +      V CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+
Sbjct: 429 VDVSLDNLRPS----PVVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNIYKQLV 484

Query: 547 ISGMGFGAQRWVATLQRQCECLAILMSTSV 576
            SG+ FGA+RWVATL RQCE LA  M+T++
Sbjct: 485 NSGLAFGAKRWVATLDRQCERLASAMATNI 514


>gi|1173622|gb|AAB37230.1| homeobox protein [Phalaenopsis sp. SM9108]
          Length = 768

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/483 (53%), Positives = 344/483 (71%), Gaps = 35/483 (7%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           R+RED  + ES+SGSDN++G SGD+ D  +  PRKKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 59  RARED--DFESKSGSDNIEGGSGDEHDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPD 115

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR  LSK L LE  QVKFWFQN+RTQMKTQ +R ENS LR ENDKLR EN+  ++A+ 
Sbjct: 116 DKQRKALSKELGLEPLQVKFWFQNKRTQMKTQHDRQENSQLRAENDKLRNENLRYKEALS 175

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS--MGPPPMP 278
           N  C NCGGPA +G++S +E HLRIENARL++E+DR+  +A K++G+P++S  +  P +P
Sbjct: 176 NASCPNCGGPATLGEMSFDEHHLRIENARLREEIDRISGIAAKYVGKPMNSYPLLSPTLP 235

Query: 279 N-SSLELGVGTINGFGGLSSTVTTTL--PADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
           + SSL+LGVG   GFG  S T+   +  PA+    ++                      +
Sbjct: 236 SRSSLDLGVG---GFGLHSPTMGGDMFSPAELLRSVAG------------------QPEV 274

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRS--FEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
           ++ M +ELA+AAM+EL++MAQ  EPLW  S   +G G ++LN EEY++ F   IG KP G
Sbjct: 275 DKPMVIELAVAAMEELIRMAQLGEPLWTSSPGLDG-GNEILNEEEYVQNFPRGIGPKPFG 333

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
             +EASRET +VI++ + LVE LMD N+W+ MF  +++R  T +V+S+G+ G  NGALQ+
Sbjct: 334 LKSEASRETAVVIMSHVNLVEILMDANQWSTMFSGIVSRGMTLEVLSTGVAGNYNGALQV 393

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M AE QV SPLVP RE  F+R+CKQH +G WAVVDVS+D++R +S     + CRR PSGC
Sbjct: 394 MTAEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDSLRPSS---LMMRCRRRPSGC 450

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           ++Q+MPNGYSKV WVEH E D+  VH +YKPL+ SG+ FGA+RWV+TL RQCE LA +M+
Sbjct: 451 LIQEMPNGYSKVIWVEHFEVDDRSVHSIYKPLVNSGIAFGAKRWVSTLDRQCERLASVMA 510

Query: 574 TSV 576
           +S+
Sbjct: 511 SSI 513


>gi|449453486|ref|XP_004144488.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 761

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/505 (50%), Positives = 342/505 (67%), Gaps = 26/505 (5%)

Query: 82  GGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRH 141
           G +LQ   MGE+     GR    +  E  ++S S+N +  SGDD      P +KKRYHRH
Sbjct: 35  GQELQGIEMGENE---YGRMRETEEFESGTKSSSENHEVGSGDDQLNNQRPNKKKRYHRH 91

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  QIQ++E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKT  ERHEN+ L
Sbjct: 92  TQHQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQL 151

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALA 261
           R EN+KLRA+NM  R+A+ N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A
Sbjct: 152 RTENEKLRADNMRYREALSNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIA 211

Query: 262 GKFLGRPVSS--MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVM 319
            K++G+PVS+  +   P+P+  LELG+G+  G           +      G ++ L  + 
Sbjct: 212 AKYVGKPVSNYPLLSTPIPSRPLELGMGSYGGHDLGLGPGGGDM-----FGAADLLRTIS 266

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY 379
            P+ +           ++ + +ELA+AAM+ELV+MAQ  EPLW+   +GS  + LN EEY
Sbjct: 267 APSEA-----------DKPVIIELAVAAMEELVRMAQMGEPLWMTGVDGSTNE-LNEEEY 314

Query: 380 LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVI 439
           +R+F   IG KP+GF  EASR T +VI+N ++LVE LMD N+W+  F  +++R  T +V+
Sbjct: 315 VRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVL 374

Query: 440 SSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG 499
           S+G+ G  NGALQ+M +ELQV SPLVP RE  F+R+CKQH EG WAVVDVS+DT+R    
Sbjct: 375 STGVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRP--- 431

Query: 500 APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVA 559
           APA   CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY  L+ SG  FGA+RW+A
Sbjct: 432 APAL-RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIA 490

Query: 560 TLQRQCECLAILMSTSVSARDHTGI 584
           TL RQCE LA  M+TS+      G+
Sbjct: 491 TLDRQCERLASAMATSIIPNGDAGV 515


>gi|357168220|ref|XP_003581542.1| PREDICTED: homeobox-leucine zipper protein ROC4-like [Brachypodium
           distachyon]
          Length = 790

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/491 (54%), Positives = 346/491 (70%), Gaps = 32/491 (6%)

Query: 108 EHESRSGS-DNMD----GASGDDLDAADNPPRKKR--YHRHTPQQIQELESLFKECPHPD 160
           E+E RS + D++D    G  G D DAA   PRK++  Y RH+ +QIQEL++LF +CPHPD
Sbjct: 54  ENERRSRTIDHLDVVSGGGFGRDDDAACGMPRKRKRPYVRHSSEQIQELQALFDKCPHPD 113

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           E QR ELS+RL L+  QVKFWFQNRRTQ K +L R EN  LRQEND+LRAEN+ IR+AMR
Sbjct: 114 EMQRAELSRRLFLDPSQVKFWFQNRRTQTKAKLVRDENVQLRQENDRLRAENLCIREAMR 173

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR------PVSSMGP 274
           +P+C NCG P ++G +SLEEQHLR +NARL +EL RVCA + +FLG+      P+ +  P
Sbjct: 174 HPVCGNCGRPVVLGVLSLEEQHLRAQNARLTEELSRVCAASSEFLGKSISLPAPLQTHQP 233

Query: 275 PPMPNSSLELGVGTINGFGGL-SSTVTTTLPADF-GTGISNALPVVMPPNRSGPGVTGLD 332
            PMP S ++   G   G G + S+TV ++   +F GT  +++   +M  +     + G+D
Sbjct: 234 EPMPGSRVQPAAG---GVGSVPSTTVASSTITEFTGTASTSSGTAIMTMSEEPLEIAGID 290

Query: 333 RSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS---GRQVLNHEEYLRTFTPCIGL 389
           +S+     LELA +AMDELVKMAQ ++PLW  S   S    ++ LN+EEYL TF+PCIG+
Sbjct: 291 KSV----LLELAKSAMDELVKMAQMEDPLWTPSVSLSDSPAKETLNYEEYLNTFSPCIGV 346

Query: 390 KPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN 448
           KP GF +EASRE+G+VI  +S+ALVE LMD  RW+ +F CM+A+++T   IS+G+ G+R+
Sbjct: 347 KPAGFQSEASRESGIVISDDSVALVEALMDERRWSNIFSCMVAKSSTIAEISTGVAGSRD 406

Query: 449 GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF----- 503
           GAL L+ AELQVLSPLVP+R+  FLRFCKQ  EG WAVVDVSID +    G  A      
Sbjct: 407 GALLLIQAELQVLSPLVPIRKATFLRFCKQLGEGAWAVVDVSIDGLVVDQGLAAASTTAN 466

Query: 504 VNCRRLPSGCVV-QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           +NCRRLPSGC+V QD  NG+ KV WVEHAEYDES VH LY+ L+ SG+  GA RW+ATLQ
Sbjct: 467 MNCRRLPSGCLVQQDTRNGFCKVKWVEHAEYDESSVHPLYRSLLRSGLALGAGRWLATLQ 526

Query: 563 RQCECLAILMS 573
           RQC+C A L S
Sbjct: 527 RQCKCWATLQS 537


>gi|449515643|ref|XP_004164858.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HDG2-like [Cucumis sativus]
          Length = 760

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 256/505 (50%), Positives = 341/505 (67%), Gaps = 26/505 (5%)

Query: 82  GGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRH 141
           G +LQ   MGE+     GR    +  E  ++S S+N +  SGDD      P +KKRYHRH
Sbjct: 35  GQELQGIEMGENE---YGRMRETEEFESGTKSSSENHEVGSGDDQLNNQRPNKKKRYHRH 91

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  QIQ++E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKT  ERHEN+ L
Sbjct: 92  TQHQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQL 151

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALA 261
           R EN+KLRA+NM  R+A+ N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A
Sbjct: 152 RTENEKLRADNMRYREALSNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIA 211

Query: 262 GKFLGRPVSS--MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVM 319
            K++G+PVS+  +   P+P+  LELG+G+  G           +      G ++ L  + 
Sbjct: 212 AKYVGKPVSNYPLLSTPIPSRPLELGMGSYGGHDLGLGPGGGDM-----FGAADLLRTIS 266

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY 379
            P+ +           ++ + +ELA+AAM+ELV+MAQ  EPLW+   + S  + LN EEY
Sbjct: 267 APSEA-----------DKPVIIELAVAAMEELVRMAQMGEPLWMTGVDRSTNE-LNEEEY 314

Query: 380 LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVI 439
           +R+F   IG KP+GF  EASR T +VI+N ++LVE LMD N+W+  F  +++R  T +V+
Sbjct: 315 VRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVL 374

Query: 440 SSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG 499
           S+G+ G  NGALQ+M +ELQV SPLVP RE  F+R+CKQH EG WAVVDVS+DT+R    
Sbjct: 375 STGVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRP--- 431

Query: 500 APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVA 559
           APA   CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY  L+ SG  FGA+RW+A
Sbjct: 432 APAL-RCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIA 490

Query: 560 TLQRQCECLAILMSTSVSARDHTGI 584
           TL RQCE LA  M+TS+      G+
Sbjct: 491 TLDRQCERLASAMATSIIPHGDAGV 515


>gi|356543720|ref|XP_003540308.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 732

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/483 (52%), Positives = 331/483 (68%), Gaps = 27/483 (5%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           R RED  +  ++SGS+N++GASG+D D    P +KKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 28  RIREDDFDSATKSGSENLEGASGEDQDP--RPNKKKRYHRHTQHQIQEMEAFFKECPHPD 85

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ 
Sbjct: 86  DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRFREALG 145

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS---MGPPPM 277
           N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV S   + P  +
Sbjct: 146 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVSYPLVSPSSV 205

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
           P   LELGV    G             A       + L       RS  G T  D+ I  
Sbjct: 206 PPRPLELGVSGGFGGQPGGIGGDMYGGA-----AGDLL-------RSISGPTEADKPI-- 251

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTE 397
              +ELA+AAM+EL+ MAQ  EPLW+ + +G+   VLN +EY+R+F   IG KP GF  E
Sbjct: 252 --IIELAVAAMEELIGMAQMGEPLWLTTLDGT--TVLNEDEYIRSFPRGIGPKPVGFKCE 307

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASRET +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE
Sbjct: 308 ASRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 367

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQD 517
           +QV SPLVP RE  F+R+CKQH +G WAVVDVS+D +R +  A     CRR PSGC++Q+
Sbjct: 368 VQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSA----RCRRRPSGCLIQE 423

Query: 518 MPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           MPNGYSKV WVEH E D+  VH LYK L+ SG  FGA+RW+A L RQCE LA  M+T++ 
Sbjct: 424 MPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIANLDRQCERLASAMATNIP 483

Query: 578 ARD 580
             D
Sbjct: 484 TVD 486


>gi|449468346|ref|XP_004151882.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 764

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/486 (51%), Positives = 331/486 (68%), Gaps = 35/486 (7%)

Query: 101 RSREDLLEHESRSGSDN-MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHP 159
           R R+D  +  ++SGSDN  +  SGDD D     P+KKRYHRHT  QIQE+E+ FKECPHP
Sbjct: 68  RIRDDDFDSATKSGSDNNHELVSGDDQDPR---PKKKRYHRHTQHQIQEMEAFFKECPHP 124

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAM 219
           D+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR EN+KLRA+NM  R+A+
Sbjct: 125 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREAL 184

Query: 220 RNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS--MGPPPM 277
            N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV +  +  P +
Sbjct: 185 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPSV 244

Query: 278 PNSSLELGVGTIN---GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
           P+  LELG+       G GG           D     S+ +  +  P  +          
Sbjct: 245 PSRPLELGMANFGPQPGLGG----------GDIYGSASDLIRSISAPTEA---------- 284

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
            ++ M +ELA+AAM+EL +MAQ  EPLW+ + +GS   +LN +EYLRTF   IG KP+GF
Sbjct: 285 -DKPMIIELAVAAMEELTRMAQMGEPLWMTTLDGS-THMLNEDEYLRTFPRGIGPKPSGF 342

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
             EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M
Sbjct: 343 KCEASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVM 402

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 514
            +E QV SPLVP RE  ++R+CKQH +G W VVDVS+D +R T G    V CRR PSGC+
Sbjct: 403 TSEFQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPG----VRCRRRPSGCL 458

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           +Q+MPNGYSKVTWVEH E D+  VH LYK L+ SG  FGA+RWV TL RQCE LA  M+T
Sbjct: 459 IQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMAT 518

Query: 575 SVSARD 580
           ++   D
Sbjct: 519 NIPTGD 524


>gi|109729914|tpg|DAA05771.1| TPA_inf: class IV HD-Zip protein HDZ41 [Selaginella moellendorffii]
          Length = 815

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/470 (52%), Positives = 338/470 (71%), Gaps = 29/470 (6%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           M+GAS +D + +D PPRK+R+HRHT +QIQE+E +FKECPHPDEKQR++LS+ L LE RQ
Sbjct: 103 MEGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGLEPRQ 162

Query: 178 VKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS 237
           VKFWFQNRRTQMK   ER ENS+LR EN++LR+EN+++R+A++N  C +CGGPA +G++S
Sbjct: 163 VKFWFQNRRTQMKAHQERAENSMLRAENERLRSENIAMREALKNATCPHCGGPATLGEMS 222

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSS 297
            +EQ LRIENA LKDELDRV +LA K+L +P                G G  +G    +S
Sbjct: 223 YDEQQLRIENAHLKDELDRVSSLAAKYLSKP----------------GGGAPHGLSVQTS 266

Query: 298 TVTTTL---PADFGTGISNALPVVMPPN----RSGPGVTGLDRSIERSMFLELALAAMDE 350
              T+L    A FG   ++AL V   P+     + PG  GL + +E+ +  ELA+ AM+E
Sbjct: 267 LPGTSLDPSAAAFGPQSNSALAVTPGPSMLELATRPG--GLSQ-VEKPLVAELAIIAMEE 323

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           L+ +AQ+ EPLWI   E   ++ LN EEY++ F+  +G  P G   E +R+TG+V++N  
Sbjct: 324 LLALAQSREPLWILE-ENGAKESLNGEEYMQQFSRGLGPTPVGLKAEVTRDTGLVMMNGA 382

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
           ALV+T+MD  RW +MF C+I+R  T++V+S+G+GG  N ALQLM+AE QVLSPLVP RE 
Sbjct: 383 ALVDTIMDAGRWMDMFSCIISRALTSEVLSTGVGGNWNNALQLMYAEFQVLSPLVPTREA 442

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
            FLR+CKQHAEGVWA+VDVS+D +RE    P  +  R  PSG ++QDMPNGYSKVT ++H
Sbjct: 443 YFLRYCKQHAEGVWAIVDVSVDGLREN--PPPQLRNRLRPSGFLIQDMPNGYSKVTILQH 500

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
            EYD+ QV+ +Y+ L+ SG+ FGA+RW+ATLQRQCE LA+L++T++S RD
Sbjct: 501 MEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRD 550


>gi|356550018|ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/483 (53%), Positives = 334/483 (69%), Gaps = 27/483 (5%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           R RED  +  ++SGS+N++GASG+D D    P +KKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 77  RIREDDFDSATKSGSENLEGASGEDQDP--RPNKKKRYHRHTQHQIQEMEAFFKECPHPD 134

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ 
Sbjct: 135 DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRFREALG 194

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS---MGPPPM 277
           N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV S   + P  +
Sbjct: 195 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVSYPLVSPSSI 254

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
           P   LELG+G   G     +       A       + L       RS  G T  D+ I  
Sbjct: 255 PPRPLELGIGGGFGGQPGGTGGDMYGGA-----AGDLL-------RSISGPTEADKPI-- 300

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTE 397
              +ELA+AAM+EL+ MAQ  EPLW+ + +G+   VLN +EY+R+F   IG KP GF  E
Sbjct: 301 --IIELAVAAMEELIGMAQMGEPLWLTTLDGT--TVLNEDEYIRSFPRGIGPKPAGFKFE 356

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASRET +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE
Sbjct: 357 ASRETAVVIMNHVNLVEILMDVNQWSTVFAGIVSRAMTLEVLSTGVAGNYNGALQVMTAE 416

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQD 517
           +QV SPLVP RE  F+R+CKQH +G WAVVDVS+D +R +  A     CRR PSGC++Q+
Sbjct: 417 VQVPSPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSA----RCRRRPSGCLIQE 472

Query: 518 MPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           MPNGYSKV WVEH E D+  VH LYK L+ SG  FGA+RWVATL RQCE LA  M+T++ 
Sbjct: 473 MPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIP 532

Query: 578 ARD 580
             D
Sbjct: 533 TVD 535


>gi|224078678|ref|XP_002305602.1| predicted protein [Populus trichocarpa]
 gi|222848566|gb|EEE86113.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/476 (50%), Positives = 339/476 (71%), Gaps = 30/476 (6%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           ++E++SG++ M+  SGDD D ++  P+KKRYHRHT +QIQ++E+ FKECPHPD+KQR EL
Sbjct: 31  DYETKSGTETMEAQSGDDQDPSEQHPKKKRYHRHTQRQIQDMEAFFKECPHPDDKQRKEL 90

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE  QVKFWFQN+RTQMK Q ER ENS+L+ EN++LR EN   ++A+RN  C NC
Sbjct: 91  SRELGLEPLQVKFWFQNKRTQMKAQHERSENSILKAENERLRVENNRYKEALRNASCPNC 150

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMPNSSLELG 285
           GGPA +G++S +EQHLRIEN RL++E+DR+  +A K++G+P+SS+    P +P+ SL+LG
Sbjct: 151 GGPAALGEMSFDEQHLRIENVRLREEIDRISGIAAKYVGKPLSSLSNLSPHLPSRSLDLG 210

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELAL 345
           V   + FG  S  V          G ++ L  V  P  +           ++SM +E+A+
Sbjct: 211 V---SNFGAQSGFVGEMF------GATDLLRSVTGPTEA-----------DKSMIVEIAV 250

Query: 346 AAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMV 405
           AAM+EL+++AQ  EPLWI+    +  ++LN EEYLRTFT  IG KP G  +EASRE+ +V
Sbjct: 251 AAMEELMRIAQAGEPLWIQGENNT--EMLNEEEYLRTFTRGIGPKPLGMRSEASRESAVV 308

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           I+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SP+V
Sbjct: 309 IMNHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPIV 368

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVN-CRRLPSGCVVQDMPNGYSK 524
           P RE  F+R+CKQH +G WAVVDVS+D++R     P+ ++ CRR PSGC++Q++PNGYSK
Sbjct: 369 PTRENYFVRYCKQHTDGTWAVVDVSLDSLR-----PSLLSKCRRRPSGCLIQELPNGYSK 423

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           V WVEH E D+  V  +Y+PL+ SG+ FGA+RWV TL RQCE LA  M+ ++ + D
Sbjct: 424 VVWVEHIEVDDRSVQNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPSGD 479


>gi|225444363|ref|XP_002266688.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2
           [Vitis vinifera]
 gi|302144076|emb|CBI23181.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/475 (53%), Positives = 333/475 (70%), Gaps = 28/475 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES+SG++NMD  SGDD D  +  P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR EL
Sbjct: 32  EFESKSGTENMDAPSGDDQDP-NQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 90

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE  QVKFWFQN+RTQMK Q ERHENS LR EN+KLRAEN+  ++A+ N  C +C
Sbjct: 91  SRELGLEPLQVKFWFQNKRTQMKAQHERHENSNLRAENEKLRAENIRYKEALSNATCPHC 150

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNS--SLELG 285
           GGPA IG++S +EQHLRIENARL+DE+DR+  +A K++G+P+ S        S  SL+LG
Sbjct: 151 GGPASIGEMSFDEQHLRIENARLRDEIDRISGIAAKYVGKPMVSYPHLSTHTSSRSLDLG 210

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELAL 345
           VG    FG  S  V       +G G  + L  V  P  +           ++ M +ELA+
Sbjct: 211 VGN---FGAQSGIVGDM----YGGG--DLLRSVSLPTEA-----------DKPMIVELAV 250

Query: 346 AAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMV 405
           AAM+EL++MAQ  EPLWI + + S  ++L+ +EYLRTF   IG KP G  +EASRET +V
Sbjct: 251 AAMEELIRMAQAGEPLWIPTSDNS-TEILSEDEYLRTFPRGIGPKPLGLKSEASRETAVV 309

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           I+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SPLV
Sbjct: 310 IMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 369

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
           P RE  F+R+CK H +G WAVVDVS+D +R     P   N RR PSGC++Q++PNGYSKV
Sbjct: 370 PTRENYFVRYCKHHPDGTWAVVDVSLDNLR---SGPITRN-RRRPSGCLIQELPNGYSKV 425

Query: 526 TWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
            WVEH E D+  VH +Y+PL+ SG+ FGA+RWVATL RQCE LA  M++++ A D
Sbjct: 426 IWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMASNIPAGD 480


>gi|356542838|ref|XP_003539872.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 727

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/482 (52%), Positives = 330/482 (68%), Gaps = 27/482 (5%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           R  ED  +  ++SGS+N +GASG+D D    P +KKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 23  RILEDEFDSATKSGSENHEGASGEDQDP--RPNKKKRYHRHTQHQIQEMEAFFKECPHPD 80

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ 
Sbjct: 81  DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTNLRTENEKLRADNMRYREALS 140

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMP 278
           N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV +     P +P
Sbjct: 141 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLP 200

Query: 279 NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
              LEL                       G  +  A  ++    RS  G T  D+ I   
Sbjct: 201 PRPLEL----------GVGGAGFGGQPGIGVDMYGAGDLL----RSISGPTEADKPI--- 243

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
             +ELA+AAM+EL+ MAQ  EPLW+ + +G+   +LN +EY+R+F   IG KP+GF  EA
Sbjct: 244 -IIELAVAAMEELIGMAQMGEPLWLTTLDGTS-TMLNEDEYIRSFPRGIGPKPSGFKCEA 301

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           SRET +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AEL
Sbjct: 302 SRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEL 361

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 518
           Q+ +PLVP RE  F+R+CKQHA+G WAVVDVS+D +R    A     CRR PSGC++Q+M
Sbjct: 362 QLPTPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPGPSA----RCRRRPSGCLIQEM 417

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
           PNGYSKVTWVEH E D+  VH LYK L+ SG  FGA+RWVATL RQCE LA  M+T++  
Sbjct: 418 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPT 477

Query: 579 RD 580
            D
Sbjct: 478 VD 479


>gi|223947725|gb|ACN27946.1| unknown [Zea mays]
          Length = 647

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/417 (60%), Positives = 316/417 (75%), Gaps = 31/417 (7%)

Query: 189 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
           MKTQLERHEN+LL+QENDKLRAENM+IR+AMR+P+C +CG PA++G++SLEEQHL IENA
Sbjct: 1   MKTQLERHENALLKQENDKLRAENMAIREAMRSPMCGSCGSPAMLGEVSLEEQHLCIENA 60

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPP--------PMPNSSLELGVGTINGFGGLSSTVT 300
           RLKDEL+RV ALA KFLG+P+  +  P        PMP+SSLEL VG + G G + S   
Sbjct: 61  RLKDELNRVYALATKFLGKPMPVLSGPMLQPNLSLPMPSSSLELAVGGLRGLGSIPSL-- 118

Query: 301 TTLPADFGTGISNALPVVMPPNRSG----PGVTGLDRSIERSMFLELALAAMDELVKMAQ 356
                +F  G+S+ L  V+ P R+     P + G+D    RSM LELA++AMDELVK+AQ
Sbjct: 119 ----DEFAGGVSSPLGTVITPARATGSAPPPMVGVD----RSMLLELAISAMDELVKLAQ 170

Query: 357 TDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVII-NSLALV 413
            DEPLW+ S  GS  +++LN EEY  +F+P +G +KP G+V+EASRE+G+VII NSLALV
Sbjct: 171 VDEPLWLPSLSGSPDKKLLNFEEYAHSFSPSVGAVKPVGYVSEASRESGLVIIDNSLALV 230

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ETLMD  RW++MF CMIA+    + ++SG+ G+RNGAL LM AELQVLSPLVP+REV FL
Sbjct: 231 ETLMDVRRWSDMFSCMIAKATVLEEVTSGIAGSRNGALLLMKAELQVLSPLVPIREVTFL 290

Query: 474 RFCKQHAEGVWAVVDVSID-TIRE----TSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
           RFCKQ AEG WAVVDVSID  +R+    T+     + CRRLPSGCV+QD PNGY KVTWV
Sbjct: 291 RFCKQLAEGAWAVVDVSIDGLVRDHNSGTASNAGNIRCRRLPSGCVMQDTPNGYCKVTWV 350

Query: 529 EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS-TSVSARDHTGI 584
           E+ EYDE+ VHQLY+PLI SG+ FGA+RW+A LQRQCECLAILMS  +VSA D + I
Sbjct: 351 EYTEYDEASVHQLYRPLIRSGLAFGARRWLAMLQRQCECLAILMSPDTVSANDSSVI 407


>gi|356517624|ref|XP_003527487.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 729

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/482 (52%), Positives = 331/482 (68%), Gaps = 27/482 (5%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           R RED  +  ++SGS+N +GASG+D D    P +KKRYHRHT  QIQE+E+ FKECPHPD
Sbjct: 23  RIREDEFDSATKSGSENHEGASGEDQDP--RPNKKKRYHRHTQHQIQEMEAFFKECPHPD 80

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+A+ 
Sbjct: 81  DKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTNLRTENEKLRADNMRYREALS 140

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMP 278
           N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV +     P +P
Sbjct: 141 NASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLP 200

Query: 279 NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
              LE+GVG     G     V      D    IS              G T  D+ I   
Sbjct: 201 PRPLEIGVGGAGFGGQPGIGVDMYGAGDLLRSIS--------------GPTEADKPI--- 243

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
             +ELA+AAM+EL+ MAQ  EPLW+ + +G+   +LN +EY+R+F   IG KP+GF  EA
Sbjct: 244 -IIELAVAAMEELIGMAQMGEPLWLTTLDGTS-TMLNEDEYIRSFPRGIGPKPSGFKCEA 301

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           SRET +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AEL
Sbjct: 302 SRETAVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEL 361

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 518
           Q+ +PLVP RE  F+R+CKQH +G WAVVDVS+D +R +  A     CRR PSGC++Q+M
Sbjct: 362 QLPTPLVPTRESYFVRYCKQHGDGTWAVVDVSLDNLRPSPSA----RCRRRPSGCLIQEM 417

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
           PNGYSKVTWVEH E D+  VH LYK L+ SG  FGA+R VATL RQCE LA  M+T++  
Sbjct: 418 PNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRLVATLDRQCERLASAMATNIPT 477

Query: 579 RD 580
            D
Sbjct: 478 VD 479


>gi|413919222|gb|AFW59154.1| outer cell layer2 [Zea mays]
          Length = 863

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 259/492 (52%), Positives = 337/492 (68%), Gaps = 48/492 (9%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            P RKK Y+RHTP+QI++LE++FKE  HPDEKQR +LS++L L+ RQVKFWFQNRRT +K
Sbjct: 133 KPKRKKPYNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDPRQVKFWFQNRRTHLK 192

Query: 191 T---------------QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD 235
                           QLER EN+ L+ ENDKLR EN+SIR+A+R+ +C+ CGGPA++G+
Sbjct: 193 CLTWLSLLHGPELGKNQLERQENARLKHENDKLRVENLSIREAIRDLVCSCCGGPAVLGE 252

Query: 236 ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG------PPPMPNSSLELGVGTI 289
           +S EE  LR+ENARL+DEL RVC +  KF+G+P+S M       P PM  SSLEL V   
Sbjct: 253 LSPEEHQLRLENARLRDELARVCTVTSKFIGKPMSHMELLLAKEPHPMTGSSLELAVAVG 312

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPP--NRSGPGVTGLDRSIERSMFLELALAA 347
            G    SS +  +  ++     S++   V  P    S P V     SI++S F +LA++A
Sbjct: 313 VGSSVPSSKMPVSTISELAGSTSSSTGTVTTPMVTASLPMV-----SIDKSKFAQLAVSA 367

Query: 348 MDELVKMAQTDEPLWIRSFEGSGR---QVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           M+ELVKMA+ +EPLWI +    G    + LN +EYL+ F+PC+G+KP GFV+EASRE+G+
Sbjct: 368 MNELVKMARMNEPLWIPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGI 427

Query: 405 VIINS-LALVETLMD--------------PNRWAEMFPCMIARTATTDVISSGMGGTRNG 449
           V I+S  AL+E  MD              P RW+++F C++A+ +  + I  G+ G+RNG
Sbjct: 428 VTIDSSAALMEVFMDEVLLVPPCSLFLLLPRRWSDIFYCIVAKASIVEEILPGVAGSRNG 487

Query: 450 ALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRL 509
           AL LM AELQ+LSPLVP+REV FLRFCKQ AEG WAVVDVSID ++          CRRL
Sbjct: 488 ALLLMQAELQMLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLQTDQCLATNTKCRRL 547

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
           PSGCV+QD PNG  KVTWVEHAEY E+ VHQLY+PL+ SG+  GA RW+ATLQRQCECLA
Sbjct: 548 PSGCVLQDTPNG-CKVTWVEHAEYPEASVHQLYQPLMRSGLALGAGRWLATLQRQCECLA 606

Query: 570 ILMSTSVSARDH 581
           ILMS S++A +H
Sbjct: 607 ILMS-SLAAPEH 617


>gi|312282177|dbj|BAJ33954.1| unnamed protein product [Thellungiella halophila]
          Length = 749

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/495 (51%), Positives = 345/495 (69%), Gaps = 35/495 (7%)

Query: 96  GIIGRRSREDLLEHESRSGSD-NMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLF 153
           GI G  SRED  + E++SG++   +  SG++L D    P +KKRYHRHT +QIQELES F
Sbjct: 26  GITG--SRED--DFETKSGTEVTTENPSGEELQDPNQRPNKKKRYHRHTQRQIQELESFF 81

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN +L+ +NDKLRAEN 
Sbjct: 82  KECPHPDDKQRKELSRDLGLEPLQVKFWFQNKRTQMKAQHERHENQILKSDNDKLRAENN 141

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV-SSM 272
             ++A+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+P+ SS 
Sbjct: 142 RYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSF 201

Query: 273 GPP---PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVT 329
           G P     P+ SL+L VG      G    +       +GTG  + L  V  P+ +     
Sbjct: 202 GAPLAIHAPSRSLDLEVGNFGNQAGFVGEM-------YGTG--DILRSVSIPSET----- 247

Query: 330 GLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGL 389
                 ++ M +ELA+AAM+ELV+MAQ  +PLW+ S + +  ++LN EEY RTF   IG 
Sbjct: 248 ------DKPMIVELAVAAMEELVRMAQAVDPLWV-STDNNSIEILNEEEYFRTFPRGIGP 300

Query: 390 KPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNG 449
           KP G  +EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NG
Sbjct: 301 KPLGLRSEASRESAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNG 360

Query: 450 ALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRL 509
           ALQ+M AE QV SPLVP RE  F+R+CKQH++G WAVVDVS+D++R           RR 
Sbjct: 361 ALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPN----PISRTRRR 416

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
           PSGC++Q++PNGYSKVTW+EH E D+  VH +YKPL+ SG+ FGA+RWV+TL+RQCE LA
Sbjct: 417 PSGCLIQELPNGYSKVTWIEHMEVDDRSVHTMYKPLVHSGLAFGAKRWVSTLERQCERLA 476

Query: 570 ILMSTSVSARDHTGI 584
             M++++ A D + I
Sbjct: 477 SSMASNIPAGDLSVI 491


>gi|18412734|ref|NP_567274.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
 gi|75331628|sp|Q93V99.1|PDF2_ARATH RecName: Full=Homeobox-leucine zipper protein PROTODERMAL FACTOR 2;
           AltName: Full=HD-ZIP protein PDF2; AltName:
           Full=Homeodomain transcription factor PDF2
 gi|15983372|gb|AAL11554.1|AF424560_1 AT4g04890/T1J1_3 [Arabidopsis thaliana]
 gi|14276060|dbj|BAB58961.1| protodermal factor2 [Arabidopsis thaliana]
 gi|17064998|gb|AAL32653.1| Unknown protein [Arabidopsis thaliana]
 gi|23197872|gb|AAN15463.1| Unknown protein [Arabidopsis thaliana]
 gi|332657038|gb|AEE82438.1| homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis
           thaliana]
          Length = 743

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/486 (51%), Positives = 345/486 (70%), Gaps = 34/486 (6%)

Query: 96  GIIGRRSREDLLEHESRSGSD-NMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLF 153
           GI G  SRED  + E++SG++   +  SG++L D +  P +KKRYHRHT +QIQELES F
Sbjct: 26  GITG--SRED--DFETKSGTEVTTENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESFF 81

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN +L+ +NDKLRAEN 
Sbjct: 82  KECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAENN 141

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV-SSM 272
             ++A+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+P+ SS 
Sbjct: 142 RYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSF 201

Query: 273 GPPPM--PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTG 330
            P  +  P+ SL+L VG      G    +       +GTG  + L  V  P+ +      
Sbjct: 202 APLAIHAPSRSLDLEVGNFGNQTGFVGEM-------YGTG--DILRSVSIPSET------ 246

Query: 331 LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK 390
                ++ + +ELA+AAM+ELV+MAQT +PLW+ +   +  ++LN EEY RTF   IG K
Sbjct: 247 -----DKPIIVELAVAAMEELVRMAQTGDPLWLST--DNSVEILNEEEYFRTFPRGIGPK 299

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
           P G  +EASR++ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGA
Sbjct: 300 PLGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGA 359

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLP 510
           LQ+M AE QV SPLVP RE  F+R+CKQH++G WAVVDVS+D++R ++     +  RR P
Sbjct: 360 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPST---PILRTRRRP 416

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC++Q++PNGYSKVTW+EH E D+  VH +YKPL+ SG+ FGA+RWVATL+RQCE LA 
Sbjct: 417 SGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLAS 476

Query: 571 LMSTSV 576
            M++++
Sbjct: 477 SMASNI 482


>gi|7267248|emb|CAB81031.1| putative homeotic protein [Arabidopsis thaliana]
          Length = 738

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/486 (51%), Positives = 345/486 (70%), Gaps = 34/486 (6%)

Query: 96  GIIGRRSREDLLEHESRSGSD-NMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLF 153
           GI G  SRED  + E++SG++   +  SG++L D +  P +KKRYHRHT +QIQELES F
Sbjct: 21  GITG--SRED--DFETKSGTEVTTENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESFF 76

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN +L+ +NDKLRAEN 
Sbjct: 77  KECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAENN 136

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV-SSM 272
             ++A+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+P+ SS 
Sbjct: 137 RYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSF 196

Query: 273 GPPPM--PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTG 330
            P  +  P+ SL+L VG      G    +       +GTG  + L  V  P+ +      
Sbjct: 197 APLAIHAPSRSLDLEVGNFGNQTGFVGEM-------YGTG--DILRSVSIPSET------ 241

Query: 331 LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK 390
                ++ + +ELA+AAM+ELV+MAQT +PLW+ +   +  ++LN EEY RTF   IG K
Sbjct: 242 -----DKPIIVELAVAAMEELVRMAQTGDPLWLST--DNSVEILNEEEYFRTFPRGIGPK 294

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
           P G  +EASR++ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGA
Sbjct: 295 PLGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGA 354

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLP 510
           LQ+M AE QV SPLVP RE  F+R+CKQH++G WAVVDVS+D++R ++     +  RR P
Sbjct: 355 LQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPST---PILRTRRRP 411

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC++Q++PNGYSKVTW+EH E D+  VH +YKPL+ SG+ FGA+RWVATL+RQCE LA 
Sbjct: 412 SGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLAS 471

Query: 571 LMSTSV 576
            M++++
Sbjct: 472 SMASNI 477


>gi|357471231|ref|XP_003605900.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355506955|gb|AES88097.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 734

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/485 (51%), Positives = 328/485 (67%), Gaps = 35/485 (7%)

Query: 101 RSREDLLEHESRSGSDNMDG--ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           R RED  E  ++S S+N +G  ASG++       P++KRYHRHT  QIQE+ES FKECPH
Sbjct: 28  RIREDEFESGTKSCSENHEGGAASGEEQGPR---PKRKRYHRHTQHQIQEMESFFKECPH 84

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ER ENS LR +N+KLRA+NM  R+A
Sbjct: 85  PDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERSENSQLRADNEKLRADNMRYREA 144

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV---SSMGPP 275
           + N  C NCGGP  IG++S +E HLR+ENARL++E+DR+  +A K++G+PV   S++ P 
Sbjct: 145 LSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISTMAAKYVGKPVVNYSNISPS 204

Query: 276 PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
             P +  E+G G   G G +          D      + L       RS  G T  D+ I
Sbjct: 205 LPPRT--EIGFGNPQGIGTM----------DMYGASGDIL-------RSISGPTEADKPI 245

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
                +ELA+AAM+EL+ MAQ  +PLW+R+       VLN +EY+R+F   IG KPNGF 
Sbjct: 246 ----IIELAVAAMEELIGMAQMGDPLWLRTTPEGAATVLNEDEYVRSFPRGIGPKPNGFK 301

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 455
            EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M 
Sbjct: 302 CEASRESSVVIMNHVNLVEILMDVNQWSTVFAGIVSRAVTVEVLSTGVAGNYNGALQVMT 361

Query: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVV 515
           AE QV SPLVP RE  F+R+CKQH +G WAVVDVS+D +R +  +     CRR PSGC++
Sbjct: 362 AEFQVPSPLVPTRESYFVRYCKQHPDGTWAVVDVSLDNLRPSPSS----RCRRRPSGCLI 417

Query: 516 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           Q+MPNGYSKVTWVEH E DE  VH LYK L+ +G  FGA+RWVATL RQCE LA  M+T+
Sbjct: 418 QEMPNGYSKVTWVEHVEVDERGVHNLYKQLVNTGDAFGAKRWVATLDRQCERLASSMATN 477

Query: 576 VSARD 580
           +   D
Sbjct: 478 IPTVD 482


>gi|187611405|sp|A2YR02.1|ROC7_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/497 (51%), Positives = 328/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASG-------DDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G       DD D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 49  RAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDP-NQRPRKKRYHRHTQHQIQELEAFF 107

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 108 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 167

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 168 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 227

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 228 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 256

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 257 D--FDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 311

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 312 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 371

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 372 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 431

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 432 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 491

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 492 LASAMASNVASSGDAGV 508


>gi|218200438|gb|EEC82865.1| hypothetical protein OsI_27729 [Oryza sativa Indica Group]
          Length = 785

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/497 (51%), Positives = 328/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASG-------DDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G       DD D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 85  RAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDP-NQRPRKKRYHRHTQHQIQELEAFF 143

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 144 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 203

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 204 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 263

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 264 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 292

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 293 D--FDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 347

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 348 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 407

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 408 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 467

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 468 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 527

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 528 LASAMASNVASSGDAGV 544


>gi|22328861|ref|NP_193906.2| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|79325215|ref|NP_001031692.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|75330714|sp|Q8RWU4.1|ATML1_ARATH RecName: Full=Homeobox-leucine zipper protein MERISTEM L1; AltName:
           Full=HD-ZIP protein ATML1; AltName: Full=Homeodomain
           transcription factor ATML1
 gi|20268701|gb|AAM14054.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|23297714|gb|AAN12908.1| putative L1-specific homeobox gene ATML1/ovule-specific homeobox
           protein A20 [Arabidopsis thaliana]
 gi|110739777|dbj|BAF01795.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|332659098|gb|AEE84498.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
 gi|332659099|gb|AEE84499.1| homeobox-leucine zipper protein MERISTEM L1 [Arabidopsis thaliana]
          Length = 762

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/487 (50%), Positives = 340/487 (69%), Gaps = 32/487 (6%)

Query: 108 EHESRSGSD-NMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           + E++SG++  M+    ++L D    P +KKRYHRHT +QIQELES FKECPHPD+KQR 
Sbjct: 34  DFETKSGAEVTMENPLEEELQDPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRK 93

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN +L+ ENDKLRAEN   +DA+ N  C 
Sbjct: 94  ELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCP 153

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS--------MGPPPM 277
           NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+P+ +             +
Sbjct: 154 NCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHI 213

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
           P+ SL+L VG    FG  +++ T  +   FG+  S+ L  V  P+ +           ++
Sbjct: 214 PSRSLDLEVGN---FGNNNNSHTGFVGEMFGS--SDILRSVSIPSEA-----------DK 257

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTE 397
            M +ELA+AAM+ELV+MAQT +PLW+ S   +  ++LN EEY RTF   IG KP G  +E
Sbjct: 258 PMIVELAVAAMEELVRMAQTGDPLWVSS--DNSVEILNEEEYFRTFPRGIGPKPIGLRSE 315

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASRE+ +VI+N + L+E LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE
Sbjct: 316 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 375

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQD 517
            QV SPLVP RE  F+R+CKQH++G+WAVVDVS+D++R +         RR PSGC++Q+
Sbjct: 376 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPS----PITRSRRRPSGCLIQE 431

Query: 518 MPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           + NGYSKVTWVEH E D+  VH +YKPL+ +G+ FGA+RWVATL RQCE LA  M++++ 
Sbjct: 432 LQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIP 491

Query: 578 ARDHTGI 584
           A D + I
Sbjct: 492 ACDLSVI 498


>gi|325260819|gb|ADZ04638.1| hypothetical protein [Oryza glaberrima]
          Length = 778

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/497 (51%), Positives = 328/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASG-------DDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G       DD D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 78  RAPRDELEMSKSGGSDNLESGGGGGGGGSGDDQDP-NQRPRKKRYHRHTQHQIQELEAFF 136

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 137 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 196

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 197 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 256

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 257 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 285

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+EL++MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 286 D--FDKPLVIELAVAAMEELIRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 340

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 341 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 400

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 401 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 460

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 461 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 520

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 521 LASAMASNVASSGDAGV 537


>gi|255554965|ref|XP_002518520.1| homeobox protein, putative [Ricinus communis]
 gi|223542365|gb|EEF43907.1| homeobox protein, putative [Ricinus communis]
          Length = 727

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/479 (51%), Positives = 329/479 (68%), Gaps = 26/479 (5%)

Query: 103 REDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEK 162
           ++D  +HE++SG++  +  SGDD D  +  P+KKRYHRHT +QIQE+E+ FKECPHPD+K
Sbjct: 28  KDDDYDHETKSGTETTEAPSGDDQDP-NQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDK 86

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 222
           QR ELS+ L LE  QVKFWFQN+RTQMK Q ER ENS+L+ EN+KLRAEN   ++A+ N 
Sbjct: 87  QRKELSRELGLEPLQVKFWFQNKRTQMKAQHERQENSILKAENEKLRAENNRYKEALSNA 146

Query: 223 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSL 282
            C NCGGPA +G+IS +EQHLRIENARL++E+DR+  +A K++G+P+SS+        S 
Sbjct: 147 SCPNCGGPATLGEISFDEQHLRIENARLREEIDRLSGIAAKYIGKPISSLSHLSSHLPSR 206

Query: 283 ELGVGTINGFGGLSSTVTTTLPA-DFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFL 341
            L +G  N FG  S  V     A DF   I            +GP         E+ M +
Sbjct: 207 SLDLGVSN-FGTQSGYVGEMYGATDFLRSI------------TGP------TEAEKPMIV 247

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRE 401
           ELA+AAM+EL++MAQ  +PLW+   E S  +VLN EEYLR F   IG +P G  +EASRE
Sbjct: 248 ELAVAAMEELMRMAQAGDPLWVPG-ENSTTEVLNEEEYLRAFPRGIGPRPLGLRSEASRE 306

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
           + +VI+N + LVE LMD N+W+ +F  +++R  T +++S+G+ G  NGALQ+M AE QV 
Sbjct: 307 SAVVIMNHVNLVEILMDVNQWSTVFCSIVSRAMTLEILSTGVAGNYNGALQVMTAEFQVP 366

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNG 521
           SPLVP RE  F+R+CKQH +G WAVVDVS+D +R +  A      RR  SGCV+QD+PNG
Sbjct: 367 SPLVPTRENYFVRYCKQHVDGTWAVVDVSLDNLRPSPIA----RSRRRLSGCVIQDLPNG 422

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           YSKVTW+EH E D+  VH LY+PLI SG+ FGA+RWVA L RQCE LA  M+ ++ A D
Sbjct: 423 YSKVTWIEHIEVDDRSVHSLYRPLINSGLAFGAKRWVAILDRQCERLASSMAINIPAGD 481


>gi|3047106|gb|AAC13617.1| Arabidopsis thaliana homeodomain protein AHDP (SP:P93041)
           [Arabidopsis thaliana]
 gi|7267412|emb|CAB80882.1| homeodomain protein AHDP [Arabidopsis thaliana]
          Length = 590

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/372 (66%), Positives = 287/372 (77%), Gaps = 24/372 (6%)

Query: 213 MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM 272
           MSIR+AMRNPICTNCGGPA++GD+SLEE HLRIENARLKDELDRVC L GKFLG   +  
Sbjct: 1   MSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGHHHNHH 60

Query: 273 GPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD 332
                 NSSLEL VGT N  G  +       P DFG      LP   P  +    + G+D
Sbjct: 61  Y-----NSSLELAVGTNNNGGHFA------FPPDFGG-GGGCLP---PQQQQSTVINGID 105

Query: 333 RSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN 392
              ++S+ LELAL AMDELVK+AQ++EPLW++S +G  R  LN +EY+RTF+     KP 
Sbjct: 106 ---QKSVLLELALTAMDELVKLAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPT 158

Query: 393 GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           G  TEASR +GMVIINSLALVETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQ
Sbjct: 159 GLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQ 218

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSG 512
           LM+AELQVLSPLVPVR VNFLRFCKQHAEGVWAVVDVSID +RE SG    +  RRLPSG
Sbjct: 219 LMNAELQVLSPLVPVRNVNFLRFCKQHAEGVWAVVDVSIDPVRENSGGAPVI--RRLPSG 276

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           CVVQD+ NGYSKVTWVEHAEYDE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+
Sbjct: 277 CVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILI 336

Query: 573 STSVSARDHTGI 584
           S+SV++ D+T I
Sbjct: 337 SSSVTSHDNTSI 348


>gi|4455283|emb|CAB36819.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
 gi|7268972|emb|CAB81282.1| L1 specific homeobox gene ATML1/ovule-specific homeobox protein A20
           [Arabidopsis thaliana]
          Length = 718

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/466 (51%), Positives = 327/466 (70%), Gaps = 30/466 (6%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D    P +KKRYHRHT +QIQELES FKECPHPD+KQR ELS+ L LE  QVKFWFQN+R
Sbjct: 11  DPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKR 70

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQMK Q ERHEN +L+ ENDKLRAEN   +DA+ N  C NCGGPA IG++S +EQHLRIE
Sbjct: 71  TQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIE 130

Query: 247 NARLKDELDRVCALAGKFLGRPVSS--------MGPPPMPNSSLELGVGTINGFGGLSST 298
           NARL++E+DR+ A+A K++G+P+ +             +P+ SL+L VG    FG  +++
Sbjct: 131 NARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGN---FGNNNNS 187

Query: 299 VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTD 358
            T  +   FG+  S+ L  V  P+ +           ++ M +ELA+AAM+ELV+MAQT 
Sbjct: 188 HTGFVGEMFGS--SDILRSVSIPSEA-----------DKPMIVELAVAAMEELVRMAQTG 234

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           +PLW+ S   +  ++LN EEY RTF   IG KP G  +EASRE+ +VI+N + L+E LMD
Sbjct: 235 DPLWVSS--DNSVEILNEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMD 292

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
            N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SPLVP RE  F+R+CKQ
Sbjct: 293 VNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQ 352

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           H++G+WAVVDVS+D++R +         RR PSGC++Q++ NGYSKVTWVEH E D+  V
Sbjct: 353 HSDGIWAVVDVSLDSLRPS----PITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSV 408

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           H +YKPL+ +G+ FGA+RWVATL RQCE LA  M++++ A D + I
Sbjct: 409 HNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACDLSVI 454


>gi|38636822|dbj|BAD03062.1| putative OCL5 protein [Oryza sativa Japonica Group]
 gi|46390804|dbj|BAD16310.1| putative OCL5 protein [Oryza sativa Japonica Group]
          Length = 828

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/497 (51%), Positives = 327/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASGD-------DLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G        D D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 128 RAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDP-NQRPRKKRYHRHTQHQIQELEAFF 186

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 187 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 246

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 247 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 306

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 307 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 335

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 336 D--FDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 390

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 391 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 450

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 451 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 510

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 511 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 570

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 571 LASAMASNVASSGDAGV 587


>gi|222639874|gb|EEE68006.1| hypothetical protein OsJ_25963 [Oryza sativa Japonica Group]
          Length = 785

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/497 (51%), Positives = 327/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASGD-------DLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G        D D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 85  RAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDP-NQRPRKKRYHRHTQHQIQELEAFF 143

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 144 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 203

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 204 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 263

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 264 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 292

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 293 D--FDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 347

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 348 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 407

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 408 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 467

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 468 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 527

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 528 LASAMASNVASSGDAGV 544


>gi|187611406|sp|A3BPF2.1|ROC7_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC7; AltName:
           Full=GLABRA 2-like homeobox protein 7; AltName:
           Full=HD-ZIP protein ROC7; AltName: Full=Homeodomain
           transcription factor ROC7; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 7
          Length = 749

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/497 (51%), Positives = 327/497 (65%), Gaps = 50/497 (10%)

Query: 101 RSREDLLEHESRSGSDNMDGASGD-------DLDAADNPPRKKRYHRHTPQQIQELESLF 153
           R+  D LE     GSDN++   G        D D  +  PRKKRYHRHT  QIQELE+ F
Sbjct: 49  RAPRDELEMSKSGGSDNLESGGGGGGGGSGGDQDP-NQRPRKKRYHRHTQHQIQELEAFF 107

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRAENM
Sbjct: 108 KECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENNALRAENEKLRAENM 167

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+P +++ 
Sbjct: 168 RYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPAAAVS 227

Query: 274 P--PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
              PP+P S+                      P D   GI  A          G  V G 
Sbjct: 228 AAYPPLPPSNRS--------------------PLDH-MGIPGA----------GADVFGA 256

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
           D   ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K 
Sbjct: 257 D--FDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKS 311

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
               +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 312 PELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGAL 371

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PAFVNC-R 507
           QLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+D +R  +G    PA     R
Sbjct: 372 QLMSAEFQMPSPLVPTRETQFLRYCKQHPDGTWAVVDVSLDGLRAGAGGGCQPAAARGHR 431

Query: 508 RLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           R PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE 
Sbjct: 432 RRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCER 491

Query: 568 LAILMSTSVSARDHTGI 584
           LA  M+++V++    G+
Sbjct: 492 LASAMASNVASSGDAGV 508


>gi|4325343|gb|AAD17342.1| contains similarity to homeobox domains (Pfam: PF00046, Score,36.5,
           E=6.9e-08, N=1) [Arabidopsis thaliana]
          Length = 772

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/501 (50%), Positives = 346/501 (69%), Gaps = 49/501 (9%)

Query: 96  GIIGRRSREDLLEHESRSGSD-NMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESL- 152
           GI G  SRED  + E++SG++   +  SG++L D +  P +KKRYHRHT +QIQELESL 
Sbjct: 21  GITG--SRED--DFETKSGTEVTTENPSGEELQDPSQRPNKKKRYHRHTQRQIQELESLK 76

Query: 153 --------------FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHEN 198
                         FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN
Sbjct: 77  TFSYILSFLEFYRFFKECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHEN 136

Query: 199 SLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVC 258
            +L+ +NDKLRAEN   ++A+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ 
Sbjct: 137 QILKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRIS 196

Query: 259 ALAGKFLGRPV-SSMGPPPM--PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           A+A K++G+P+ SS  P  +  P+ SL+L VG      G    +       +GTG  + L
Sbjct: 197 AIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVGEM-------YGTG--DIL 247

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
             V  P+ +           ++ + +ELA+AAM+ELV+MAQT +PLW+ +   +  ++LN
Sbjct: 248 RSVSIPSET-----------DKPIIVELAVAAMEELVRMAQTGDPLWLST--DNSVEILN 294

Query: 376 HEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
            EEY RTF   IG KP G  +EASR++ +VI+N + LVE LMD N+W+ +F  +++R  T
Sbjct: 295 EEEYFRTFPRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALT 354

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR 495
            +V+S+G+ G  NGALQ+M AE QV SPLVP RE  F+R+CKQH++G WAVVDVS+D++R
Sbjct: 355 LEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLR 414

Query: 496 ETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQ 555
            ++     +  RR PSGC++Q++PNGYSKVTW+EH E D+  VH +YKPL+ SG+ FGA+
Sbjct: 415 PST---PILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAK 471

Query: 556 RWVATLQRQCECLAILMSTSV 576
           RWVATL+RQCE LA  M++++
Sbjct: 472 RWVATLERQCERLASSMASNI 492


>gi|1881536|gb|AAB49378.1| meristem L1 layer homeobox protein [Arabidopsis thaliana]
          Length = 718

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/466 (51%), Positives = 327/466 (70%), Gaps = 30/466 (6%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D    P +KKRYHRHT +QIQELES FKECPHPD+KQR ELS+ L LE  QVKFWFQN+R
Sbjct: 11  DPNQRPNKKKRYHRHTQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKR 70

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQMK Q ERHEN +L+ ENDKLRAEN   +DA+ N  C NCGGPA IG++S +EQHLRIE
Sbjct: 71  TQMKAQHERHENQILKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIE 130

Query: 247 NARLKDELDRVCALAGKFLGRPVSS--------MGPPPMPNSSLELGVGTINGFGGLSST 298
           NARL++E+DR+ A+A K++G+P+ +             +P+ SL+L VG    FG  +++
Sbjct: 131 NARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVGN---FGNNNNS 187

Query: 299 VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTD 358
            T  +   FG+  S+ L  V  P+ +           ++ M +ELA+AAM+ELV+MAQT 
Sbjct: 188 HTGFVGEMFGS--SDILRSVSIPSEA-----------DKPMIVELAVAAMEELVRMAQTG 234

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           +PLW+ S   +  ++LN EEY RTF   IG KP G  +EASRE+ +VI+N + L+E LMD
Sbjct: 235 DPLWVSS--DNSVEILNEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMD 292

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
            N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SPLVP RE  F+R+CKQ
Sbjct: 293 VNQWSSVFCGIVSRALTLEVLSTGVRGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQ 352

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           H++G+WAVVDVS+D++R +         RR PSGC++Q++ NGYSKVTWVEH E D+  V
Sbjct: 353 HSDGIWAVVDVSLDSLRPS----PITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDRSV 408

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           H +YKPL+ +G+ FGA+RWVATL RQCE LA  M++++ A D + I
Sbjct: 409 HNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACDLSVI 454


>gi|357453443|ref|XP_003596998.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486046|gb|AES67249.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 774

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/486 (52%), Positives = 335/486 (68%), Gaps = 35/486 (7%)

Query: 101 RSRED-LLEHESRSG-SDNMDGA-SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECP 157
           R RED L +  ++SG S+N + A SG+D +      +KKRYHRHT  QIQE+E+ FKECP
Sbjct: 71  RIREDELFDSATKSGNSENQEAANSGEDQEPR---AKKKRYHRHTQHQIQEMEAFFKECP 127

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           HPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R+
Sbjct: 128 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFRE 187

Query: 218 AMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS---MGP 274
           A+ N  C NCGGP  IG++S +E HLRIEN+RL++E+DR+ A+A K++G+PV S   + P
Sbjct: 188 ALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLSP 247

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
             +P   LELG+G   G  G+   +       +G G  + L       RS  G T  D  
Sbjct: 248 SSVPPRPLELGIGGFGGQPGMGGDM-------YGAG--DLL-------RSISGPTEAD-- 289

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
             + M +ELA+AAM+EL+ MAQ  +PLW+ + EG    +LN EEY+R+F   IG KP GF
Sbjct: 290 --KPMIIELAVAAMEELIGMAQMGDPLWLPTLEGGS--ILNEEEYVRSFPRGIGPKPAGF 345

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
             EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M
Sbjct: 346 KCEASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVM 405

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 514
            AELQV SPLVP RE  F+R+CKQHA+G WAVVDVS+D +R +  A      RR PSGC+
Sbjct: 406 TAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSA----RSRRRPSGCL 461

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           +Q+MPNGYSKV WVEH E D+  VH LYK L+ SG  FGA+RW+ATL RQCE LA  M+T
Sbjct: 462 IQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMAT 521

Query: 575 SVSARD 580
           ++   D
Sbjct: 522 NIPTVD 527


>gi|357453445|ref|XP_003596999.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355486047|gb|AES67250.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 787

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/487 (52%), Positives = 334/487 (68%), Gaps = 37/487 (7%)

Query: 101 RSRED-LLEHESRSG-SDNMDGASGDDLDAADNPPR--KKRYHRHTPQQIQELESLFKEC 156
           R RED L +  ++SG S+N + A+  +    D  PR  KKRYHRHT  QIQE+E+ FKEC
Sbjct: 71  RIREDELFDSATKSGNSENQEAANSGE----DQEPRAKKKRYHRHTQHQIQEMEAFFKEC 126

Query: 157 PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIR 216
           PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN+ LR EN+KLRA+NM  R
Sbjct: 127 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENTSLRTENEKLRADNMRFR 186

Query: 217 DAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS---MG 273
           +A+ N  C NCGGP  IG++S +E HLRIEN+RL++E+DR+ A+A K++G+PV S   + 
Sbjct: 187 EALSNASCPNCGGPTAIGEMSFDEHHLRIENSRLREEIDRISAIAAKYVGKPVVSYPLLS 246

Query: 274 PPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDR 333
           P  +P   LELG+G   G  G+   +       +G G  + L       RS  G T  D 
Sbjct: 247 PSSVPPRPLELGIGGFGGQPGMGGDM-------YGAG--DLL-------RSISGPTEAD- 289

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
              + M +ELA+AAM+EL+ MAQ  +PLW+ + EG    +LN EEY+R+F   IG KP G
Sbjct: 290 ---KPMIIELAVAAMEELIGMAQMGDPLWLPTLEGGS--ILNEEEYVRSFPRGIGPKPAG 344

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           F  EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+
Sbjct: 345 FKCEASRESSVVIMNHVNLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQV 404

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M AELQV SPLVP RE  F+R+CKQHA+G WAVVDVS+D +R +  A      RR PSGC
Sbjct: 405 MTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSA----RSRRRPSGC 460

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           ++Q+MPNGYSKV WVEH E D+  VH LYK L+ SG  FGA+RW+ATL RQCE LA  M+
Sbjct: 461 LIQEMPNGYSKVIWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCERLASAMA 520

Query: 574 TSVSARD 580
           T++   D
Sbjct: 521 TNIPTVD 527


>gi|302763529|ref|XP_002965186.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
 gi|300167419|gb|EFJ34024.1| hypothetical protein SELMODRAFT_230527 [Selaginella moellendorffii]
          Length = 745

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/497 (51%), Positives = 334/497 (67%), Gaps = 28/497 (5%)

Query: 98  IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECP 157
           +  +S+ED  E  S SGS+NM  ASGD+ +    PPRKKRYHRHT +QIQE+ESLFKECP
Sbjct: 15  VKSKSKEDENESRSGSGSENMGNASGDEQE----PPRKKRYHRHTARQIQEMESLFKECP 70

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           HPD+KQR ELS+ L LE RQVKFWFQNRRTQ+K Q ER EN++LR E +KLRAEN+++R+
Sbjct: 71  HPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMRE 130

Query: 218 AMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---PVSSMGP 274
           A+RN  C NCGGPA + ++S EEQHLRIENA LKDELDRV A+A K  GR   P+ S   
Sbjct: 131 AIRNASCPNCGGPATLREMSFEEQHLRIENACLKDELDRVSAVAAKLFGRSVPPMVSQQA 190

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTT----TLPADFGTGISNALPVVMPPNRSGPGVTG 330
           P    SSL L +    G   +S         + P      +SNA       N      + 
Sbjct: 191 PQFSGSSLNLSIQGAAGSNPMSPPAQVAGLLSAPPSGVEELSNA-------NNLNTNKSV 243

Query: 331 LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK 390
           +   +E++  L+LA+ AMDELV++AQ D P+WI S + S ++VLN++EY+R F   +  K
Sbjct: 244 VLSDVEKNSVLDLAVMAMDELVQLAQPDSPVWIPSPDAS-KEVLNYDEYVRQFPKFVESK 302

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
             GF T+A+R+ G+V++N+ +LVE LMDP +W EMF   +++  T +VIS    G+ +G 
Sbjct: 303 QYGFKTDATRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCA-PGSLSGT 361

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLP 510
           LQLM+AE+Q LSPL+  REV FLR+CKQH +  WAVVDVS+D +  T  +PA ++CRR P
Sbjct: 362 LQLMYAEIQALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTP-SPASLHCRRSP 420

Query: 511 SGCVVQ-------DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           SG ++Q       DMPNG SKV  VEH EYD+  VHQL+K L+ SG  FGA++W+ATLQR
Sbjct: 421 SGMLIQDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQR 480

Query: 564 QCECLAILMSTSVSARD 580
           QCE L   +    SAR+
Sbjct: 481 QCEALTCYLPGLASARE 497


>gi|302757697|ref|XP_002962272.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
 gi|109729918|tpg|DAA05773.1| TPA_inf: class IV HD-Zip protein HDZ43 [Selaginella moellendorffii]
 gi|300170931|gb|EFJ37532.1| hypothetical protein SELMODRAFT_140884 [Selaginella moellendorffii]
          Length = 745

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/493 (51%), Positives = 334/493 (67%), Gaps = 20/493 (4%)

Query: 98  IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECP 157
           +  +S+ED  E  S SGS+NM  ASGD+ +    PPRKKRYHRHT +QIQE+ESLFKECP
Sbjct: 15  VKSKSKEDENESRSGSGSENMGNASGDEQE----PPRKKRYHRHTARQIQEMESLFKECP 70

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           HPD+KQR ELS+ L LE RQVKFWFQNRRTQ+K Q ER EN++LR E +KLRAEN+++R+
Sbjct: 71  HPDDKQRQELSRELGLEPRQVKFWFQNRRTQLKAQQERAENNVLRHEVEKLRAENITMRE 130

Query: 218 AMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---PVSSMGP 274
           A+RN  C NCGGPA + ++S EEQHLRIENA LKDELDRV A+A K  GR   P+ S   
Sbjct: 131 AIRNASCPNCGGPATLREMSFEEQHLRIENACLKDELDRVSAVAAKLFGRSVPPMVSQQA 190

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
           P    SSL L   +I G  G +        A   +   + +  +   N      + +   
Sbjct: 191 PQFSGSSLNL---SIQGAAGSNPMSPPAQVAGLLSAPPSGVEELSNSNNLSTNKSVVLSD 247

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           +E++  L+LA+ AMDELV++AQ D P+WI S + S ++VLN++EY+R F   +  K  GF
Sbjct: 248 VEKNSVLDLAVMAMDELVQLAQPDSPVWIPSPDAS-KEVLNYDEYVRQFPKFVESKQYGF 306

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
            T+A+R+ G+V++N+ +LVE LMDP +W EMF   +++  T +VIS    G+ +G LQLM
Sbjct: 307 KTDATRDDGLVMMNAASLVEVLMDPAKWMEMFCTNVSKALTLEVISCA-PGSLSGTLQLM 365

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 514
           +AE+Q LSPL+  REV FLR+CKQH +  WAVVDVS+D +  T  +PA ++CRR PSG +
Sbjct: 366 YAEIQALSPLMQTREVYFLRYCKQHQDSTWAVVDVSVDGLHGTP-SPASLHCRRSPSGML 424

Query: 515 VQ-------DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           +Q       DMPNG SKV  VEH EYD+  VHQL+K L+ SG  FGA++W+ATLQRQCE 
Sbjct: 425 IQDMPDSIHDMPNGCSKVVVVEHMEYDDQPVHQLFKSLVSSGGAFGARKWLATLQRQCEA 484

Query: 568 LAILMSTSVSARD 580
           L   +    SAR+
Sbjct: 485 LTCYLPGLASARE 497


>gi|224116084|ref|XP_002317205.1| predicted protein [Populus trichocarpa]
 gi|222860270|gb|EEE97817.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/479 (49%), Positives = 332/479 (69%), Gaps = 36/479 (7%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           ++E++SG++ M+  SGDD D +   P+KKRYHRHT +QIQE+E+ F+ECPHPD+KQR EL
Sbjct: 26  DYETKSGTETMEAPSGDDQDPSGQRPKKKRYHRHTQRQIQEMEAFFQECPHPDDKQRKEL 85

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L L+  QVKFWFQN+RTQMK Q ER ENS+L+ EN+KLR EN   ++A+ +  C NC
Sbjct: 86  SRELGLDPLQVKFWFQNKRTQMKAQHERSENSILKAENEKLRMENNRYKEALSSASCPNC 145

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMPNSSLELG 285
           GGPA +G++S +EQHLRIENARL++E+DR+  +A K++G+P+SS+      +P+ SL+LG
Sbjct: 146 GGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSLSNLSHHLPSRSLDLG 205

Query: 286 V---GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           V   G  +GF G     T  L A                      VTG   + ++ M +E
Sbjct: 206 VSNYGAHSGFVGEMFGATALLGA----------------------VTGPTEA-DKPMIVE 242

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           +A+AAM+EL++MAQ  EPLWI+    +  +VLN EEYLRTFT  IG +P G  +EASRE+
Sbjct: 243 VAVAAMEELMRMAQAGEPLWIQGENNT--EVLNEEEYLRTFTRGIGPRPLGMRSEASRES 300

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
            +VI++ + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV S
Sbjct: 301 AVVIMSHVNLVEILMDANQWSTIFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPS 360

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVN-CRRLPSGCVVQDMPNG 521
           PLVP RE  F+R+CKQH +  WAVVDVS+D++      P+ ++ CRR  SGC++Q++PNG
Sbjct: 361 PLVPTRENYFVRYCKQHTDATWAVVDVSLDSL-----CPSLMSKCRRRSSGCLIQELPNG 415

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           YS V WVEH E D+  VH +Y+PL+ SG+ FGA+RWV TL RQCE LA  M+ ++   D
Sbjct: 416 YSNVVWVEHTEVDDRSVHNIYRPLVNSGLAFGAKRWVGTLDRQCERLASSMAINIPTGD 474


>gi|397134753|gb|AFO11042.1| HD-1D [Gossypium hirsutum]
          Length = 725

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/481 (50%), Positives = 329/481 (68%), Gaps = 33/481 (6%)

Query: 103 REDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEK 162
           R+D  ++E +S ++ MD  SGDD D  D  P+KKRYHRHT +QIQE+E+ FKECPHPD+K
Sbjct: 29  RDD--DYEIKSVNETMDAPSGDDQDP-DQRPKKKRYHRHTQRQIQEMEAFFKECPHPDDK 85

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 222
           QR EL + L LE  QVKFWFQN+RTQMK Q ERHEN++L+ EN+KLRAEN   ++A+ N 
Sbjct: 86  QRKELGRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENNRYKEALSNA 145

Query: 223 ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSL 282
            C +CGGPA +G++S +EQHLRIENARL++E+DR+  +A K++G+P+SS+   P  +S L
Sbjct: 146 TCPSCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPLSSL---PHLSSHL 202

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFG-TGISNALPVVMPPNRSGPGVTGLDRSIE--RSM 339
                              +  AD G +   N    V   +RSG  +  +    E  + M
Sbjct: 203 H------------------SRSADLGASNFGNQSGFVGEMDRSGDLLRSVSGPTEADKPM 244

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 399
            +ELA+AAM+EL++MAQ+ EPLW+     +   VLN +EYLRTF   IG KP G  +EAS
Sbjct: 245 IVELAVAAMEELIRMAQSGEPLWVPG--DNSTDVLNEDEYLRTFPRGIGPKPLGLRSEAS 302

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQ 459
           RE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE Q
Sbjct: 303 RESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGKCNGALQVMTAEFQ 362

Query: 460 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMP 519
           V SPLVP RE  F R+CKQH +G WAVVDVS+D +R          CRR PSGC++Q++P
Sbjct: 363 VPSPLVPTRENYFARYCKQHIDGTWAVVDVSLDNLRPN----PMSKCRRRPSGCLIQELP 418

Query: 520 NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSAR 579
           NGYSKV WVEH E D+  VH +Y+P++ SG+ FGA+RWVATL RQCE LA  M++++ A 
Sbjct: 419 NGYSKVIWVEHVEVDDRAVHNIYRPVVNSGLAFGAKRWVATLDRQCERLASSMASNIPAG 478

Query: 580 D 580
           D
Sbjct: 479 D 479


>gi|115460702|ref|NP_001053951.1| Os04g0627000 [Oryza sativa Japonica Group]
 gi|122240821|sp|Q0J9X2.1|ROC2_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC2; AltName:
           Full=GLABRA 2-like homeobox protein 2; AltName:
           Full=HD-ZIP protein ROC2; AltName: Full=Homeodomain
           transcription factor ROC2; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 2
 gi|113565522|dbj|BAF15865.1| Os04g0627000 [Oryza sativa Japonica Group]
          Length = 784

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/497 (49%), Positives = 333/497 (67%), Gaps = 30/497 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 60  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 118

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 119 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 178

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E+DR+ A+A K++G+P
Sbjct: 179 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKP 238

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP-ADFGTGISNALPVVMPPNRSGPG 327
           +      P P  S        N     +S     LP A +G         +     +G  
Sbjct: 239 MV-----PFPVLS--------NPMAAAASRAPLDLPVAPYGVPGD-----MFGGGGAGEL 280

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRTF 383
           + G+   +++ M +ELA+AAM+ELV+MAQ DEPLW  +       +  + L+ EEY R F
Sbjct: 281 LRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMF 340

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
              +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G+
Sbjct: 341 PRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGV 400

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF 503
            G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +      
Sbjct: 401 AGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP----V 456

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL R
Sbjct: 457 LKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDR 516

Query: 564 QCECLAILMSTSVSARD 580
           QCE LA +M++++   D
Sbjct: 517 QCERLASVMASNIPTSD 533


>gi|39545845|emb|CAE04753.3| OSJNBb0060E08.16 [Oryza sativa Japonica Group]
          Length = 781

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/497 (49%), Positives = 333/497 (67%), Gaps = 30/497 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 57  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 115

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 116 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 175

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E+DR+ A+A K++G+P
Sbjct: 176 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKP 235

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP-ADFGTGISNALPVVMPPNRSGPG 327
           +      P P  S        N     +S     LP A +G         +     +G  
Sbjct: 236 MV-----PFPVLS--------NPMAAAASRAPLDLPVAPYGVPGD-----MFGGGGAGEL 277

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRTF 383
           + G+   +++ M +ELA+AAM+ELV+MAQ DEPLW  +       +  + L+ EEY R F
Sbjct: 278 LRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMF 337

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
              +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G+
Sbjct: 338 PRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGV 397

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF 503
            G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +      
Sbjct: 398 AGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSP----V 453

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL R
Sbjct: 454 LKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDR 513

Query: 564 QCECLAILMSTSVSARD 580
           QCE LA +M++++   D
Sbjct: 514 QCERLASVMASNIPTSD 530


>gi|302783435|ref|XP_002973490.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
 gi|300158528|gb|EFJ25150.1| hypothetical protein SELMODRAFT_450557 [Selaginella moellendorffii]
          Length = 684

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/497 (50%), Positives = 342/497 (68%), Gaps = 49/497 (9%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G   M+GAS +D + +D PPRK+R+HRHT +QIQE+E +FKECPHPDEKQR++LS+ L L
Sbjct: 51  GLPGMEGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGL 110

Query: 174 ETRQVKFWFQNRRTQMKTQL----------ERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           E RQVKFWFQNRRTQMK  +          ER ENS+LR EN++LR+EN+++R+A++N  
Sbjct: 111 EPRQVKFWFQNRRTQMKVSIKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNAT 170

Query: 224 CTNCGGPAIIGDISLEEQHLRIENARLKDE--LDRVCALAGKFLGRPVSSMGPPPMPNSS 281
           C +CGGPA +G++S +EQ LRIENA LKDE  LDRV +LA K+L +P             
Sbjct: 171 CPHCGGPATLGEMSYDEQQLRIENAHLKDEVQLDRVSSLAAKYLSKP------------- 217

Query: 282 LELGVGTINGFGGLSSTVTTTL---PADFGTGISNALPVVMPPN----RSGPGVTGLDRS 334
              G G  +G    +S   T+L    A FG   ++AL V   P+     + PG  GL + 
Sbjct: 218 ---GGGAPHGLSVQTSLPGTSLDPSAAAFGPQSNSALAVTPGPSMLELATRPG--GLSQ- 271

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           +E+ +  ELA+ AM+EL+ +AQ+ EPLWI   E   ++ LN EEY++ F+  +G  P G 
Sbjct: 272 VEKPLVAELAIIAMEELLALAQSREPLWILE-ENGAKESLNGEEYMQQFSRGLGPTPVGL 330

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL- 453
             E +R+TG+V++N  ALV+T+MD  RW +MF C+I+R  T++V+S+G+GG  N ALQL 
Sbjct: 331 KAEVTRDTGLVMMNGAALVDTIMDA-RWMDMFSCIISRALTSEVLSTGVGGNWNNALQLV 389

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M+AE QVLSPLVP RE  FLR+CKQHAEGVWA+VDVS+D +RE    P  +  R  PSG 
Sbjct: 390 MYAEFQVLSPLVPTREAYFLRYCKQHAEGVWAIVDVSVDGLREN--PPPQLRNRLRPSGF 447

Query: 514 VVQDMPNGYSK------VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCEC 567
           ++QDMPNGYSK      VT ++H EYD+ QV+ +Y+ L+ SG+ FGA+RW+ATLQRQCE 
Sbjct: 448 LIQDMPNGYSKVSHGFQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCER 507

Query: 568 LAILMSTSVSARDHTGI 584
           LA+L++T++S RD  GI
Sbjct: 508 LAVLLATNISPRDLGGI 524


>gi|19072102|dbj|BAB85750.1| Roc1 [Oryza sativa]
          Length = 784

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/478 (51%), Positives = 319/478 (66%), Gaps = 35/478 (7%)

Query: 108 EHESRSGSDNMDGA----SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E ES+S S+N+DGA    SGDD D  +  PRKKRYHRHT  QIQE+E+ FKECPHPD+KQ
Sbjct: 77  EFESKSCSENVDGAGDGLSGDDQDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 135

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           R ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKLRAENM  ++A+ +  
Sbjct: 136 RKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALSSAS 195

Query: 224 CTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLE 283
           C NCGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+P               
Sbjct: 196 CPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKHVGKP--------------- 240

Query: 284 LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI-----ERS 338
                I  F  LSS +     A     ++ A  VV P      G   L R +     ++ 
Sbjct: 241 ----PIVSFSVLSSPLAVAA-ARSPLDLAGAYGVVTPGLDMFGGAGDLLRGVHPLDADKP 295

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
           M +ELA+AAMDELV+MAQ DEPLW  S E +   +L+ EEY R F   +G K  G  +EA
Sbjct: 296 MIVELAVAAMDELVQMAQLDEPLWSSSSEPAA-ALLDEEEYARMFPRGLGPKQYGLKSEA 354

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           SR   +VI+    LVE LMD N++A +F  +++R +T +V+S+G+ G  NGALQ+M  E 
Sbjct: 355 SRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSMEF 414

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 518
           QV SPLVP RE  F+R+CK +++G WAVVDVS+D++R +        CRR PSGC++Q+M
Sbjct: 415 QVPSPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEM 470

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           PNGYSKVTWVEH E D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++++
Sbjct: 471 PNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNI 528


>gi|147800352|emb|CAN62139.1| hypothetical protein VITISV_039239 [Vitis vinifera]
          Length = 708

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/475 (52%), Positives = 321/475 (67%), Gaps = 31/475 (6%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES+SG++NMD  SGDD D  +  P+KKRYHRHT  QIQE+E+ FKECPHPD+KQR EL
Sbjct: 17  EFESKSGTENMDAPSGDDQDP-NQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 75

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE  QVKFWFQN+RTQMK Q ERHENS LR EN+KLRAEN+  ++A+ N  C +C
Sbjct: 76  SRELGLEPLQVKFWFQNKRTQMKAQHERHENSNLRAENEKLRAENIRYKEALSNATCPHC 135

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNS--SLELG 285
           GGPA IG++S +EQHLRIENARL+DE    C+   +    P+ S        S  SL+LG
Sbjct: 136 GGPASIGEMSFDEQHLRIENARLRDEDFWDCS---QVCWEPMVSYPHLSTHTSSRSLDLG 192

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELAL 345
           VG    FG  S  V      D   G      V +P     P            M +ELA+
Sbjct: 193 VGN---FGAQSGIV-----GDMYGGGDLLRSVSLPTEADKP------------MIVELAV 232

Query: 346 AAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMV 405
           AAM+EL++MAQ  EPLWI + + S  ++L+ +EYLRTF   IG KP G  +EASRET +V
Sbjct: 233 AAMEELIRMAQAGEPLWIPTSDNS-TEILSEDEYLRTFPRGIGPKPLGLKSEASRETAVV 291

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           I+N ++LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M AE QV SPLV
Sbjct: 292 IMNHISLVEILMDVNQWSSVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLV 351

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
           P RE  F+R+CK H +G WAVVDVS+D +R     P   N RR PSGC++Q++PNGYSKV
Sbjct: 352 PTRENYFVRYCKHHPDGTWAVVDVSLDNLR---SGPITRN-RRRPSGCLIQELPNGYSKV 407

Query: 526 TWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
            WVEH E D+  VH +Y+PL+ SG+ FGA+RWVATL RQCE LA  M++++ A D
Sbjct: 408 IWVEHVEVDDRAVHNIYRPLVNSGLAFGAKRWVATLDRQCERLASAMASNIPAGD 462


>gi|75134886|sp|Q6ZAR0.1|ROC1_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC1; AltName:
           Full=GLABRA 2-like homeobox protein 1; AltName:
           Full=HD-ZIP protein ROC1; AltName: Full=Homeodomain
           transcription factor ROC1; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 1
 gi|38636931|dbj|BAD03194.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
 gi|38637066|dbj|BAD03323.1| roc1(homeobox protein) [Oryza sativa Japonica Group]
          Length = 784

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/475 (51%), Positives = 321/475 (67%), Gaps = 29/475 (6%)

Query: 108 EHESRSGSDNMDGA----SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E ES+S S+N+DGA    SGDD D  +  PRKKRYHRHT  QIQE+E+ FKECPHPD+KQ
Sbjct: 77  EFESKSCSENVDGAGDGLSGDDQDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 135

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           R ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKLRAENM  ++A+ +  
Sbjct: 136 RKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALSSAS 195

Query: 224 CTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR-PVSSMGPPPMPNSSL 282
           C NCGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+ P+ S    P+ +S L
Sbjct: 196 CPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKHVGKPPIVSF---PVLSSPL 252

Query: 283 ELGVG-TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFL 341
            +    +     G    VT  L  D   G  + L  V P +   P            M +
Sbjct: 253 AVAAARSPLDLAGAYGVVTPGL--DMFGGAGDLLRGVHPLDADKP------------MIV 298

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRE 401
           ELA+AAMDELV+MAQ DEPLW  S E +   +L+ EEY R F   +G K  G  +EASR 
Sbjct: 299 ELAVAAMDELVQMAQLDEPLWSSSSEPAA-ALLDEEEYARMFPRGLGPKQYGLKSEASRH 357

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
             +VI+    LVE LMD N++A +F  +++R +T +V+S+G+ G  NGALQ+M  E QV 
Sbjct: 358 GAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSMEFQVP 417

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNG 521
           SPLVP RE  F+R+CK +++G WAVVDVS+D++R +        CRR PSGC++Q+MPNG
Sbjct: 418 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNG 473

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           YSKVTWVEH E D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++++
Sbjct: 474 YSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNI 528


>gi|31339097|dbj|BAC77155.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 783

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/497 (49%), Positives = 332/497 (66%), Gaps = 30/497 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 59  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 117

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 118 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 177

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E+DR+ A+A K++G+P
Sbjct: 178 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKP 237

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP-ADFGTGISNALPVVMPPNRSGPG 327
           +      P P  S        N     +S     LP A +G         +     +G  
Sbjct: 238 MV-----PFPVLS--------NPMAAAASRAPLDLPVAPYGVPGD-----MFGGGGAGEL 279

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRTF 383
           + G+   +++ M +ELA+ AM+ELV+MAQ DEPLW  +       +  + L+ EEY R F
Sbjct: 280 LRGVQSEVDKPMIVELAVPAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMF 339

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
              +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G+
Sbjct: 340 PRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGV 399

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF 503
            G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +      
Sbjct: 400 AGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPS----PV 455

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL R
Sbjct: 456 LKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDR 515

Query: 564 QCECLAILMSTSVSARD 580
           QCE LA +M++++   D
Sbjct: 516 QCERLASVMASNIPTSD 532


>gi|116312004|emb|CAJ86361.1| OSIGBa0117N13.5 [Oryza sativa Indica Group]
          Length = 781

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 245/497 (49%), Positives = 333/497 (67%), Gaps = 30/497 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 57  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 115

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 116 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 175

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E+DR+ A+A K++G+P
Sbjct: 176 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKP 235

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP-ADFGTGISNALPVVMPPNRSGPG 327
           +      P P  S        N     +S     LP A +G         +     +G  
Sbjct: 236 MV-----PFPVLS--------NPMAAAASRAPLDLPVAPYGVPGD-----MFGGGGAGEL 277

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRTF 383
           + G+   +++ M +ELA+AAM+ELV+MAQ DEPLW  +       +  + L+ EEY R F
Sbjct: 278 LRGVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDAAAAAMETLSEEEYARMF 337

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
              +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G+
Sbjct: 338 PRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGV 397

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF 503
            G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +      
Sbjct: 398 AGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPS----PV 453

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL R
Sbjct: 454 LKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDR 513

Query: 564 QCECLAILMSTSVSARD 580
           QCE LA +M++++   D
Sbjct: 514 QCERLASVMASNIPTSD 530


>gi|218195634|gb|EEC78061.1| hypothetical protein OsI_17520 [Oryza sativa Indica Group]
          Length = 784

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 244/497 (49%), Positives = 333/497 (67%), Gaps = 30/497 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 60  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 118

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 119 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 178

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E+DR+ A+A K++G+P
Sbjct: 179 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKP 238

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP-ADFGTGISNALPVVMPPNRSGPG 327
           +      P P  S        N     +S     LP A +G         +     +G  
Sbjct: 239 MV-----PFPVLS--------NPMAAAASRAPLDLPVAPYGVPGD-----MFGGGGAGEL 280

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRTF 383
           + G+   +++ M ++LA+AAM+ELV+MAQ DEPLW  +       +  + L+ EEY R F
Sbjct: 281 LRGVQSEVDKPMIVDLAVAAMEELVRMAQLDEPLWSVAPPLDAAAAAMETLSEEEYARMF 340

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
              +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G+
Sbjct: 341 PRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAVTLEVLSTGV 400

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAF 503
            G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +      
Sbjct: 401 AGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPS----PV 456

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL R
Sbjct: 457 LKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDR 516

Query: 564 QCECLAILMSTSVSARD 580
           QCE LA +M++++   D
Sbjct: 517 QCERLASVMASNIPTSD 533


>gi|242077254|ref|XP_002448563.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
 gi|241939746|gb|EES12891.1| hypothetical protein SORBIDRAFT_06g029270 [Sorghum bicolor]
          Length = 789

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/475 (50%), Positives = 317/475 (66%), Gaps = 20/475 (4%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES+SGS+N+DG S DD D    P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR EL
Sbjct: 83  EFESKSGSENVDGVSVDDQDPNQRPSKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKEL 142

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L LE  QVKFWFQN+RTQMK Q ERHENS LR EN+KLRAENM  ++A+ +  C NC
Sbjct: 143 SRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRAENEKLRAENMRYKEALSSASCPNC 202

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVG 287
           GGPA +G++S +E HLR+ENARL++E+DR+ A+A K++G+P+ S    P+ +S L     
Sbjct: 203 GGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKPMVSF---PVLSSPLAGARP 259

Query: 288 TINGFGGLSSTVTTTLPAD-FGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALA 346
           +    GG           D FG G++  L     P              ++ M +ELA+ 
Sbjct: 260 SPLDIGGGVGGAAAYGAVDMFGGGVAVDLLRGAVPQSDA----------DKPMIVELAVT 309

Query: 347 AMDELVKMAQTDEPLW-IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMV 405
           AM+ELV+MAQ DEPLW     +GS  + LN EEY   F   +G K  GF +EASR++ +V
Sbjct: 310 AMEELVRMAQLDEPLWNAPGLDGSA-ETLNEEEYAHMFPGGLGPKQYGFKSEASRDSSVV 368

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           I+    LVE LMD N++A +F  +++R  T +V+S+G+ G  NGALQ+M  E QV SPLV
Sbjct: 369 IMTHANLVEILMDVNQYATVFSSIVSRAVTLEVLSTGVAGNYNGALQVMSVEFQVPSPLV 428

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
           P RE  F+R+CKQ+A+G WAVVDVS+D++R  S     + CRR PSGC++Q+MPNGYSKV
Sbjct: 429 PTRESYFVRYCKQNADGSWAVVDVSLDSLRPNS----VLKCRRRPSGCLIQEMPNGYSKV 484

Query: 526 TWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           TWVEH E D+  VH +YK L+ SG+ FG  RWV TL  QCE L  +M +++   D
Sbjct: 485 TWVEHVEVDDRSVHNIYKLLVNSGLAFGPPRWVGTLDPQCEPLPSVMPSTIPTSD 539


>gi|162462636|ref|NP_001105127.1| outer cell layer5a [Zea mays]
 gi|8920427|emb|CAB96425.1| OCL5 protein [Zea mays]
          Length = 795

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/497 (49%), Positives = 330/497 (66%), Gaps = 30/497 (6%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDD---LDAADNPPRKKRYHRHTPQQIQE 148
           +S + +I  RS   + E ES+S S+N DG SGDD    D    P +KKRYHRHT  QIQE
Sbjct: 59  DSSDNLIHGRSDTLVDEFESKSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQE 118

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKL
Sbjct: 119 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKL 178

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+P
Sbjct: 179 RAENMRYKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKP 238

Query: 269 VSSMGPPPMPNSSLELGVGT-------INGFGGLSSTVTTTLPAD--FGTGISNALPVVM 319
           + S    P+ +S L             + G  G+ S     L AD  FG G  + L    
Sbjct: 239 MVSF---PVLSSPLAAAAAAAARSPLDLAGAYGVQSA-AAGLGADHLFGAGAGDLL---- 290

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY 379
              RS   V+      ++ M +ELA+AAMDEL++MA+ D  LW        +Q L+ EEY
Sbjct: 291 ---RS---VSAGQLDADKPMIVELAVAAMDELLRMARPDALLWGGGASAGAQQQLDEEEY 344

Query: 380 LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVI 439
           +RTF   +G +  G   EASR++ +VI+   +L+E LMD NR+A +F  +++R +T +V+
Sbjct: 345 VRTFPAGLGPRQYGLRPEASRDSAVVIMTCDSLIEILMDANRFAAVFSSIVSRASTHEVL 404

Query: 440 SSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG 499
           S+G+ G+ NGALQ+M  E QV SPLVP RE  F+R+CK + +G WAVVDVS+D++R +  
Sbjct: 405 STGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSP- 463

Query: 500 APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVA 559
               + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY+PL+ SG+ FGA+RWV 
Sbjct: 464 ---VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVG 520

Query: 560 TLQRQCECLAILMSTSV 576
           TL RQCE LA  M++++
Sbjct: 521 TLDRQCERLASAMASNI 537


>gi|242080491|ref|XP_002445014.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
 gi|18481701|gb|AAL73523.1|AF466200_2 OCL5 protein [Sorghum bicolor]
 gi|241941364|gb|EES14509.1| hypothetical protein SORBIDRAFT_07g002780 [Sorghum bicolor]
          Length = 803

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/510 (49%), Positives = 323/510 (63%), Gaps = 58/510 (11%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDL-------DAADNPPRKKRYHRHTPQQIQELES 151
            R  R D L  ES+SGSDNM+G +G          D +  P RKKRYHRHT  QIQELE+
Sbjct: 57  ARGPRHDELMMESKSGSDNMEGGAGSGSGGEELQEDLSLQPARKKRYHRHTQHQIQELEA 116

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAE 211
            FKE PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KLRAE
Sbjct: 117 FFKEYPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENMQLRAENEKLRAE 176

Query: 212 NMSIRDAMRNPICTNCGGPA--IIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV 269
           N   +DA+ N  C NCGGPA  +IG++S +E HLRIENARL+DE+DR+  +A K++G+P 
Sbjct: 177 NARYKDALANASCPNCGGPATAVIGEMSFDEHHLRIENARLRDEVDRISTIAAKYVGKPA 236

Query: 270 SSMGPPPMPNSSLELG--------------VGTINGFGGLSSTVTTTLPADFGTGISNAL 315
            S+ P     SS  +                G  + FGGL                    
Sbjct: 237 GSLLPNLSNISSASMAPYPPPPPLSSHHLLPGGTDMFGGLH------------------- 277

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF--EGSGRQV 373
                       + G     ++ + +ELA+AAM+ELV+MAQ  EPLWI +   +G+  + 
Sbjct: 278 ------------LHGAAAGFDKGLVVELAVAAMEELVRMAQLGEPLWIPALVVDGATIET 325

Query: 374 LNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           LN EEY R F   +G K     +EASRET +VI+N + L+E LMD N+W+ +F  +++R 
Sbjct: 326 LNEEEYARGFPSGVGPKLPELRSEASRETVVVIMNHVNLIEMLMDVNQWSTLFSSIVSRA 385

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
           AT +V+S+G+ G  NGALQLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS++ 
Sbjct: 386 ATLEVLSTGVAGNYNGALQLMTAEFQMPSPLVPTRESQFLRYCKQHTDGSWAVVDVSVEG 445

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
           +R +  A A    RR PSGC++Q+MPNGYS+VTWVEH E D+  VH LY+PL+ SG+ FG
Sbjct: 446 LRASGQAGA--RGRRRPSGCLIQEMPNGYSRVTWVEHVEADDMMVHDLYRPLVCSGLAFG 503

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTG 583
           A+RW A L+RQCE LA  M++ V A   +G
Sbjct: 504 ARRWAAALERQCERLASAMASGVPAGPSSG 533


>gi|326525997|dbj|BAJ93175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 344/549 (62%), Gaps = 58/549 (10%)

Query: 41  TTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGR 100
           +  +L  P LL  + Q L +           L+Q  +     GD  +   G     I GR
Sbjct: 26  SALSLGQPNLLDGSNQHLLQHHL--------LEQIPVRAAESGDNNIGSGGGGVGMIRGR 77

Query: 101 RSREDL-LEHESRSGSDNMDGASGDDLDAADNP---PRKKRYHRHTPQQIQELESLFKEC 156
            S + L  E ESRSGS+N+DG + D+ +   +P   PRKKRYHRHT  QIQE+E+ FKEC
Sbjct: 78  ESMDPLGDEFESRSGSENVDGDAVDNAEQDQDPNQRPRKKRYHRHTQHQIQEMEAFFKEC 137

Query: 157 PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIR 216
           PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +NDKLRAENM  +
Sbjct: 138 PHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRADNDKLRAENMRYK 197

Query: 217 DAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           +A+ +  C NCGGPA +G++S +E HLR+ENARL+DE+DR+ A+A K++G+P   M P P
Sbjct: 198 EALSSASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISAIAAKYVGKP---MVPFP 254

Query: 277 MPNSSLEL--GVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
           + +S L    G    + F G +S +                    PP+    GV      
Sbjct: 255 VLSSPLAAAPGASAYDVFAGAASVLQA------------------PPDDKQQGVV----- 291

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKPN- 392
                 +ELA+AAM+EL++MA+ D+PLW  + + +    L+ EEY R F  P  GL P  
Sbjct: 292 ------VELAVAAMEELLRMARLDDPLWATTVDQT--LALDEEEYARMFIDPRGGLGPKQ 343

Query: 393 -GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
            G V EASR+  +VI+   +LVE LMD N++A +F  +++R AT +V+S+G+ G  +GAL
Sbjct: 344 YGLVPEASRDATVVIMTPASLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGCYDGAL 403

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPS 511
           Q+M  E QV SPLVP RE  F+R+CK++A+G WAVVDVS+D ++        V CRR PS
Sbjct: 404 QVMSVEFQVPSPLVPTRESYFVRYCKRNADGAWAVVDVSLDGLQG-------VKCRRRPS 456

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           GC++Q+ PNGYSKVTWVEH E D+  VH +YKPL+ SG+ FGA+RWV  L RQCE LA  
Sbjct: 457 GCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKPLVGSGLAFGARRWVGVLGRQCERLASA 516

Query: 572 MSTSVSARD 580
           M++++   D
Sbjct: 517 MASNIPTSD 525


>gi|397134751|gb|AFO11041.1| HD-1A [Gossypium hirsutum]
          Length = 725

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/485 (49%), Positives = 329/485 (67%), Gaps = 37/485 (7%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPD 160
           + R+D  ++E +S ++ MD  SGDD D  D  P+ K YHRHT +QIQE+E+ FKECPHPD
Sbjct: 27  KVRDD--DYEIKSVTETMDAPSGDDQDP-DQRPKMKCYHRHTQRQIQEMEAFFKECPHPD 83

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           +KQR EL + L LE  QVKFWFQN+RTQMK Q ERHEN++L+ EN+KLRAEN   ++A+ 
Sbjct: 84  DKQRKELGRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENNRYKEALS 143

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG--PPPMP 278
           N  C +CGGPA +G++S +EQ LRIENARL++E+DR+  +A K++G+P+SS+      + 
Sbjct: 144 NATCPSCGGPAALGEMSFDEQLLRIENARLREEIDRISGIAAKYVGKPLSSLPHLSSHLH 203

Query: 279 NSSLELGV---GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
           + S++LG    GT +GF G        L                   RS  G T  D   
Sbjct: 204 SRSVDLGASNFGTQSGFVGEMDRSGDLL-------------------RSVSGPTEAD--- 241

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
            + M +ELA+AAM+EL++MAQ+ EPLW+     +   VL+ +EYLRTF   IG KP G  
Sbjct: 242 -KPMIVELAVAAMEELIRMAQSGEPLWVPG--DNSIDVLSEDEYLRTFPRGIGPKPLGLR 298

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 455
           +EASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M 
Sbjct: 299 SEASRESAVVIMNHVNLVEILMDVNQWSSVFCGIVSRAMTLEVLSTGVAGNYNGALQVMT 358

Query: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVV 515
           AE QV SPLVP RE  F+R+CKQH +G WAVVDVS+D +R          CRR PSGC++
Sbjct: 359 AEFQVPSPLVPTRENYFVRYCKQHIDGTWAVVDVSLDNLRPN----PMSKCRRRPSGCLI 414

Query: 516 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           Q++PNGYSKV WVEH E D+  +H +Y+P++ SG+ FGA+RWVATL RQCE LA  M+++
Sbjct: 415 QELPNGYSKVIWVEHVEVDDRAIHNIYRPVVNSGLAFGAKRWVATLDRQCERLASSMASN 474

Query: 576 VSARD 580
           + A D
Sbjct: 475 IPAGD 479


>gi|413921156|gb|AFW61088.1| outer cell layer5a [Zea mays]
          Length = 785

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/498 (49%), Positives = 333/498 (66%), Gaps = 31/498 (6%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDD---LDAADNPPRKKRYHRHTPQQIQE 148
           +S + +I  RS   + E ES+S S+N DG SGDD    D    P +KKRYHRHT  QIQE
Sbjct: 48  DSSDNLIHGRSDTLVDEFESKSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQE 107

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKL
Sbjct: 108 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKL 167

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+P
Sbjct: 168 RAENMRYKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKP 227

Query: 269 VSSMGPPPMPNSSLELGVGT------INGFGGLSSTVTTTLPAD---FGTGISNALPVVM 319
           + S    P+ +S L            + G  G+ S     L AD   FG G  + L    
Sbjct: 228 MVSF---PVLSSPLAAAAAAARSPLDLAGAYGVQSA-AAGLGADHVLFGAGAGDLL---- 279

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW-IRSFEGSGRQVLNHEE 378
              RS   V+      ++ M +ELA+AAMDEL++MA+ D  LW   +  G+ +Q L+ EE
Sbjct: 280 ---RS---VSAGQLDADKPMIVELAVAAMDELLRMARPDALLWGGGASAGAQQQQLDEEE 333

Query: 379 YLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDV 438
           Y+RTF   +G +  G   EASR++ +VI+   +L+E LMD NR+A +F  +++R +T +V
Sbjct: 334 YVRTFPAGLGPRQYGLRPEASRDSAVVIMTCDSLIEILMDANRFAAVFSSIVSRASTHEV 393

Query: 439 ISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS 498
           +S+G+ G+ NGALQ+M  E QV SPLVP RE  F+R+CK + +G WAVVDVS+D++R + 
Sbjct: 394 LSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSP 453

Query: 499 GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWV 558
                + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY+PL+ SG+ FGA+RWV
Sbjct: 454 ----VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWV 509

Query: 559 ATLQRQCECLAILMSTSV 576
            TL RQCE LA  M++++
Sbjct: 510 GTLDRQCERLASAMASNI 527


>gi|224028395|gb|ACN33273.1| unknown [Zea mays]
 gi|345194178|tpg|DAA34954.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413921155|gb|AFW61087.1| outer cell layer5a [Zea mays]
          Length = 796

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/498 (49%), Positives = 333/498 (66%), Gaps = 31/498 (6%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDD---LDAADNPPRKKRYHRHTPQQIQE 148
           +S + +I  RS   + E ES+S S+N DG SGDD    D    P +KKRYHRHT  QIQE
Sbjct: 59  DSSDNLIHGRSDTLVDEFESKSCSENPDGTSGDDGLEEDPNQRPNKKKRYHRHTQHQIQE 118

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKL
Sbjct: 119 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKL 178

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+P
Sbjct: 179 RAENMRYKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKP 238

Query: 269 VSSMGPPPMPNSSLELGVGT------INGFGGLSSTVTTTLPAD---FGTGISNALPVVM 319
           + S    P+ +S L            + G  G+ S     L AD   FG G  + L    
Sbjct: 239 MVSF---PVLSSPLAAAAAAARSPLDLAGAYGVQSA-AAGLGADHVLFGAGAGDLL---- 290

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW-IRSFEGSGRQVLNHEE 378
              RS   V+      ++ M +ELA+AAMDEL++MA+ D  LW   +  G+ +Q L+ EE
Sbjct: 291 ---RS---VSAGQLDADKPMIVELAVAAMDELLRMARPDALLWGGGASAGAQQQQLDEEE 344

Query: 379 YLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDV 438
           Y+RTF   +G +  G   EASR++ +VI+   +L+E LMD NR+A +F  +++R +T +V
Sbjct: 345 YVRTFPAGLGPRQYGLRPEASRDSAVVIMTCDSLIEILMDANRFAAVFSSIVSRASTHEV 404

Query: 439 ISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS 498
           +S+G+ G+ NGALQ+M  E QV SPLVP RE  F+R+CK + +G WAVVDVS+D++R + 
Sbjct: 405 LSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSP 464

Query: 499 GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWV 558
                + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY+PL+ SG+ FGA+RWV
Sbjct: 465 ----VIKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWV 520

Query: 559 ATLQRQCECLAILMSTSV 576
            TL RQCE LA  M++++
Sbjct: 521 GTLDRQCERLASAMASNI 538


>gi|356497482|ref|XP_003517589.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 731

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/488 (48%), Positives = 334/488 (68%), Gaps = 32/488 (6%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNP-PRKKRYHRHTPQQIQELESLF 153
           E  + +  R+D  E+E++S +D MD  SGDD D   NP P+KK Y RHT +QI+E+E+ F
Sbjct: 26  ESDLAKPCRDD--EYETKSITDTMDAPSGDDQDP--NPRPKKKGYRRHTQRQIEEMEAFF 81

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           K+CPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ER+EN++L+ EN+KLRAEN 
Sbjct: 82  KQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERNENAILKAENEKLRAENS 141

Query: 214 SIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMG 273
             ++A+ N  C NCGGPA +G++S +EQHLRIENARL++E+DR+  +A K++G+PV+S  
Sbjct: 142 RYKEALTNATCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGKPVTSSY 201

Query: 274 PPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDR 333
                 ++  + VG    +G  S TV      +   G     P+  P +   P       
Sbjct: 202 SNLSSLNNNHVPVGN---YGSQSGTV-----GEMYGGSDLFRPLPAPADADKP------- 246

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF-TPCIGLKPN 392
                M +ELA+AAM+EL ++AQ  EPLW+ S   S  ++LN +EYLRTF T  +G KP 
Sbjct: 247 -----MIVELAVAAMEELTRLAQAGEPLWVPSNHHS--EILNEDEYLRTFPTRGLGPKPL 299

Query: 393 GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           G  +EASRE+ +VI+N + L++ LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ
Sbjct: 300 GLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLSTGIAGNYNGALQ 359

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSG 512
           +M +E QV SPLVP RE  F+R+CKQ  +G+WAVVDVS+D +R ++        RR PSG
Sbjct: 360 VMSSEFQVASPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPST----ISRSRRRPSG 415

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           C++Q++PNGYSKVTW+EH E D+  VH +Y+ L+ SG+ FGA+RWVATL+RQCE LA  M
Sbjct: 416 CLIQELPNGYSKVTWIEHVEVDDRAVHSIYRTLVNSGLAFGAKRWVATLERQCERLASSM 475

Query: 573 STSVSARD 580
           + ++ A D
Sbjct: 476 ANNIPAGD 483


>gi|414585328|tpg|DAA35899.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 830

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/480 (50%), Positives = 319/480 (66%), Gaps = 27/480 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADN-PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLE 166
           E ES+SGS+N+DG S DD D  +  P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR E
Sbjct: 82  EFESKSGSENVDGVSVDDQDDPNQRPSKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKE 141

Query: 167 LSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN 226
           LS+ L L   QVKFWFQN+RTQMK Q ER ENS LR EN+KLRAENM  ++A+ +  C N
Sbjct: 142 LSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLRAENEKLRAENMRYKEALSSASCPN 201

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
           CGGPA +G++S +E HLR+ENARL++E+DR+ A+A K++G+P+ S      P +      
Sbjct: 202 CGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKPMVSFPVLSSPLAGARPSP 261

Query: 287 GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALA 346
             I+  G L    T    AD   G                   G  R  ++ M +ELA+ 
Sbjct: 262 LDIDSGGVLGGAATYGGAADIFGGGGGVA------------ACGAARDCDKPMIVELAVT 309

Query: 347 AMDELVKMAQTDEPLW---IRSFEGSGRQVLNHEEYLRTFTPCIGL---KPNGFVTEASR 400
           AM+ELV+MAQ DEPLW       +GS  + LN EEY R F P  GL   K  GF +EASR
Sbjct: 310 AMEELVRMAQLDEPLWNAPAGGHDGSA-ETLNEEEYARMFVPAGGLGLKKQYGFKSEASR 368

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQV 460
           ++ +VI+   +LVE LMD N++A +F  +++R AT +V+S+G+ G  NGALQ+M  E QV
Sbjct: 369 DSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQV 428

Query: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPN 520
            SPLVP R+  F+R+CKQ+A+G WAVVDVS+DT        + + CRR PSGC++Q+MPN
Sbjct: 429 PSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT-------SSVLKCRRRPSGCLIQEMPN 481

Query: 521 GYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           GYSKVTWVEH E D+  V+ +YK L+ SG+ FGA+RWV TL RQCE LA +M++++   D
Sbjct: 482 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 541


>gi|345194180|tpg|DAA34955.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414585327|tpg|DAA35898.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 795

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/480 (50%), Positives = 319/480 (66%), Gaps = 27/480 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADN-PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLE 166
           E ES+SGS+N+DG S DD D  +  P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR E
Sbjct: 82  EFESKSGSENVDGVSVDDQDDPNQRPSKKKRYHRHTLHQIQEMEAFFKECPHPDDKQRKE 141

Query: 167 LSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN 226
           LS+ L L   QVKFWFQN+RTQMK Q ER ENS LR EN+KLRAENM  ++A+ +  C N
Sbjct: 142 LSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLRAENEKLRAENMRYKEALSSASCPN 201

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
           CGGPA +G++S +E HLR+ENARL++E+DR+ A+A K++G+P+ S      P +      
Sbjct: 202 CGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKPMVSFPVLSSPLAGARPSP 261

Query: 287 GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALA 346
             I+  G L    T    AD   G                   G  R  ++ M +ELA+ 
Sbjct: 262 LDIDSGGVLGGAATYGGAADIFGGGGGVA------------ACGAARDCDKPMIVELAVT 309

Query: 347 AMDELVKMAQTDEPLW---IRSFEGSGRQVLNHEEYLRTFTPCIGL---KPNGFVTEASR 400
           AM+ELV+MAQ DEPLW       +GS  + LN EEY R F P  GL   K  GF +EASR
Sbjct: 310 AMEELVRMAQLDEPLWNAPAGGHDGSA-ETLNEEEYARMFVPAGGLGLKKQYGFKSEASR 368

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQV 460
           ++ +VI+   +LVE LMD N++A +F  +++R AT +V+S+G+ G  NGALQ+M  E QV
Sbjct: 369 DSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQV 428

Query: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPN 520
            SPLVP R+  F+R+CKQ+A+G WAVVDVS+DT        + + CRR PSGC++Q+MPN
Sbjct: 429 PSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT-------SSVLKCRRRPSGCLIQEMPN 481

Query: 521 GYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           GYSKVTWVEH E D+  V+ +YK L+ SG+ FGA+RWV TL RQCE LA +M++++   D
Sbjct: 482 GYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 541


>gi|225464265|ref|XP_002271012.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Vitis
           vinifera]
          Length = 715

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/454 (52%), Positives = 317/454 (69%), Gaps = 15/454 (3%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ LE +FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 26  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 85

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +N  LR ENDK+R EN++IR+A++N IC +CGGP I  D   +EQ LR+ENA+LK+E
Sbjct: 86  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENAQLKEE 145

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           LDRV ++A K++GRP+S + P  P+  SSL+L +G+   FGG       +L  D   G S
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQPVHISSLDLSMGS---FGGQGMGSGPSLDLDLLPGSS 202

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQ 372
           +A+P++      G G++ +D    +S+  ++A  A+DEL+++ QT+EPLW++S    GR 
Sbjct: 203 SAMPIL---PFQGTGISDMD----KSLMADVAGNALDELLRLLQTNEPLWMKS-TTDGRD 254

Query: 373 VLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           VLN E Y R F      LK      EASR++G+VI+NSLALV+  MD N+W E+FP +++
Sbjct: 255 VLNLESYERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVS 314

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
              T +V+SSGM G ++G+LQLM+ ELQVLS LVP RE  FLR+C+Q  +G WA+VDVS 
Sbjct: 315 MARTLEVLSSGMMGGQSGSLQLMYGELQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSY 374

Query: 492 DTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIISGM 550
           D  R+   AP   +  RLPSGC++QDMPNGYSKVTWVEH E  D++  H+LY+ LI  G+
Sbjct: 375 DFPRDNQFAPQNPS-HRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGL 433

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+RW+ATLQR CE  A LM    S RD  G+
Sbjct: 434 AFGAERWLATLQRMCERFACLMVKGTSTRDLGGV 467


>gi|147856728|emb|CAN83483.1| hypothetical protein VITISV_009450 [Vitis vinifera]
          Length = 717

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/454 (52%), Positives = 317/454 (69%), Gaps = 15/454 (3%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ LE +FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 28  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 87

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +N  LR ENDK+R EN++IR+A++N IC +CGGP I  D   +EQ LR+ENA+LK+E
Sbjct: 88  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENAQLKEE 147

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           LDRV ++A K++GRP+S + P  P+  SSL+L +G+   FGG       +L  D   G S
Sbjct: 148 LDRVSSIAAKYIGRPISQLPPVQPVHISSLDLSMGS---FGGQGMGSGPSLDLDLLPGSS 204

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQ 372
           +A+P++      G G++ +D    +S+  ++A  A+DEL+++ QT+EPLW++S    GR 
Sbjct: 205 SAMPIL---PFQGTGISDMD----KSLMADVAGNALDELLRLLQTNEPLWMKS-TTDGRD 256

Query: 373 VLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           VLN E Y R F      LK      EASR++G+VI+NSLALV+  MD N+W E+FP +++
Sbjct: 257 VLNLESYERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVS 316

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
              T +V+SSGM G ++G+LQLM+ ELQVLS LVP RE  FLR+C+Q  +G WA+VDVS 
Sbjct: 317 MARTLEVLSSGMMGGQSGSLQLMYGELQVLSXLVPTREFYFLRYCQQIEQGSWAIVDVSY 376

Query: 492 DTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIISGM 550
           D  R+   AP   +  RLPSGC++QDMPNGYSKVTWVEH E  D++  H+LY+ LI  G+
Sbjct: 377 DFPRDNQFAPQNPS-HRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGL 435

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+RW+ATLQR CE  A LM    S RD  G+
Sbjct: 436 AFGAERWLATLQRMCERFACLMVKGTSTRDLGGV 469


>gi|413916965|gb|AFW56897.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 798

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/507 (49%), Positives = 325/507 (64%), Gaps = 52/507 (10%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDG-ASGDD----LDAADNPPRKKRYHRHTPQQI 146
           +S + II  RS   + E ES+S S+N DG ASGDD     D    P +KKRYHRHT  QI
Sbjct: 56  DSSDNIIHGRSDALVDEFESKSCSENPDGTASGDDGQGDEDPNQRPNKKKRYHRHTQHQI 115

Query: 147 QELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQEND 206
           +E+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ER EN+ LR END
Sbjct: 116 EEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAEND 175

Query: 207 KLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLG 266
           KLRAENM  +DA+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G
Sbjct: 176 KLRAENMRYKDALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVG 235

Query: 267 RPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS-- 324
           +P+ S                    F  LSS +    P D           V PP     
Sbjct: 236 KPMVS--------------------FPVLSSPLAARSPFDLAGAYG-----VQPPGGGGG 270

Query: 325 --------GPGVTGLDRSI-------ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS 369
                   G     L RS+       ++SM +ELA+AAMDEL++MA+ D PLW     G 
Sbjct: 271 LGAADHLFGGAAGDLLRSVSAGQLSADKSMIVELAVAAMDELLRMARVDAPLWNGGVAGV 330

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
            +Q L+ EEY RTF   +G +  G   EASR+  +VI+   +LVE LMD NR+A +F  +
Sbjct: 331 PQQ-LDEEEYGRTFPGGLGPRQYGLRPEASRDDAVVIMTRDSLVEILMDANRFAAVFSSI 389

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           ++R +T +V+S+G+ G+ NGALQ+M  E QV SPLVP RE  F R+CK + +G WAVVDV
Sbjct: 390 VSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDV 449

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG 549
           S+D++R +   PA + CRR PSGC+VQ+MPNGYSKVTWVEH E D+  VH LY+PL+ SG
Sbjct: 450 SLDSLRPS---PA-LKCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSG 505

Query: 550 MGFGAQRWVATLQRQCECLAILMSTSV 576
           +GFGA RWV TL RQCE LA  M++++
Sbjct: 506 LGFGATRWVGTLDRQCERLASAMASNI 532


>gi|226501626|ref|NP_001145750.1| uncharacterized protein LOC100279257 [Zea mays]
 gi|219884299|gb|ACL52524.1| unknown [Zea mays]
 gi|345195188|tpg|DAA34959.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413916966|gb|AFW56898.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413916967|gb|AFW56899.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 802

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/507 (49%), Positives = 325/507 (64%), Gaps = 52/507 (10%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDG-ASGDD----LDAADNPPRKKRYHRHTPQQI 146
           +S + II  RS   + E ES+S S+N DG ASGDD     D    P +KKRYHRHT  QI
Sbjct: 60  DSSDNIIHGRSDALVDEFESKSCSENPDGTASGDDGQGDEDPNQRPNKKKRYHRHTQHQI 119

Query: 147 QELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQEND 206
           +E+E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ER EN+ LR END
Sbjct: 120 EEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAEND 179

Query: 207 KLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLG 266
           KLRAENM  +DA+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G
Sbjct: 180 KLRAENMRYKDALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVG 239

Query: 267 RPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS-- 324
           +P+ S                    F  LSS +    P D           V PP     
Sbjct: 240 KPMVS--------------------FPVLSSPLAARSPFDLAGAYG-----VQPPGGGGG 274

Query: 325 --------GPGVTGLDRSI-------ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS 369
                   G     L RS+       ++SM +ELA+AAMDEL++MA+ D PLW     G 
Sbjct: 275 LGAADHLFGGAAGDLLRSVSAGQLSADKSMIVELAVAAMDELLRMARVDAPLWNGGVAGV 334

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
            +Q L+ EEY RTF   +G +  G   EASR+  +VI+   +LVE LMD NR+A +F  +
Sbjct: 335 PQQ-LDEEEYGRTFPGGLGPRQYGLRPEASRDDAVVIMTRDSLVEILMDANRFAAVFSSI 393

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           ++R +T +V+S+G+ G+ NGALQ+M  E QV SPLVP RE  F R+CK + +G WAVVDV
Sbjct: 394 VSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLVPTRESYFARYCKNNPDGTWAVVDV 453

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG 549
           S+D++R +   PA + CRR PSGC+VQ+MPNGYSKVTWVEH E D+  VH LY+PL+ SG
Sbjct: 454 SLDSLRPS---PA-LKCRRRPSGCLVQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSG 509

Query: 550 MGFGAQRWVATLQRQCECLAILMSTSV 576
           +GFGA RWV TL RQCE LA  M++++
Sbjct: 510 LGFGATRWVGTLDRQCERLASAMASNI 536


>gi|225427116|ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
 gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera]
 gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/527 (47%), Positives = 351/527 (66%), Gaps = 33/527 (6%)

Query: 59  SKSMFNSPGLSLALQQPNID--NQGGGDLQLQRMGESFEGIIGRRSREDLL---EHESRS 113
           S S+F+SP     ++ PN +  +  GG         +F  II +     L    E ES S
Sbjct: 18  SDSLFSSP-----IRNPNFNFMSSMGGPFH------AFSSIIPKEESGLLRGKDEMESGS 66

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GS++++G SG++ +  +  P+KKRYHRHT +QIQE+E+LFKECPHPD+KQR++LS+ L L
Sbjct: 67  GSEHIEGVSGNEQEN-EQQPKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQELGL 125

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           + RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+ EN  ++ A+R+ IC NCGGPA++
Sbjct: 126 KPRQVKFWFQNRRTQMKAQQDRSDNVILRAENENLKNENYRLQAALRSVICPNCGGPAML 185

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           G+I+ +EQ LRIENARLK+ELDRVC LA ++ GR + ++GPPP   +       +I    
Sbjct: 186 GEIAFDEQQLRIENARLKEELDRVCCLASRYGGRAIQAIGPPPPLLAPSLDLDMSI---- 241

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
                     P       ++ +PV + P  S     GL    E+S+ LELA++++DELVK
Sbjct: 242 -----YARNFPEPMAN-CTDMIPVPLMPESSHFPEGGLVLEEEKSLALELAISSVDELVK 295

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK--PNGFVTEASRETGMVIINSLA 411
           M Q  EPLWIRS E +G++V+N EEY R F   + LK  P  F TEA+R++ +VI+NS+ 
Sbjct: 296 MCQLGEPLWIRSNE-NGKEVINVEEYGRMFPWPMNLKQHPGEFRTEATRDSAVVIMNSIN 354

Query: 412 LVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVN 471
           LV+  +D  +W E+FP +I+R  T  V+ SG+ G  NG+L LM+AELQVLSPLVP RE +
Sbjct: 355 LVDAFLDAMKWMELFPSIISRAKTVQVL-SGVSGHANGSLHLMYAELQVLSPLVPTRETH 413

Query: 472 FLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           FLR+C+Q+  EG WA+VD  ID+  +    P+    RR PSGC++QDMPNGYS+VTWVEH
Sbjct: 414 FLRYCQQNVDEGTWAIVDFPIDSFNDNL-QPSVPRYRRRPSGCIIQDMPNGYSRVTWVEH 472

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           A+ +E  VH ++   + SGM FGA RW+A LQRQCE +A LM+ ++S
Sbjct: 473 ADVEEKPVHHIFHHFVNSGMAFGATRWLAVLQRQCERVASLMARNIS 519


>gi|296088020|emb|CBI35303.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/454 (52%), Positives = 317/454 (69%), Gaps = 15/454 (3%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ LE +FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 26  RKKRYHRHTAHQIQRLEGMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQH 85

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +N  LR ENDK+R EN++IR+A++N IC +CGGP I  D   +EQ LR+ENA+LK+E
Sbjct: 86  ERADNCALRVENDKIRCENIAIREALKNVICPSCGGPPIGEDSYFDEQKLRVENAQLKEE 145

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           LDRV ++A K++GRP+S + P  P+  SSL+L +G+   FGG       +L  D   G S
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQPVHISSLDLSMGS---FGGQGMGSGPSLDLDLLPGSS 202

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQ 372
           +A+P++      G G++ +D    +S+  ++A  A+DEL+++ QT+EPLW++S    GR 
Sbjct: 203 SAMPIL---PFQGTGISDMD----KSLMADVAGNALDELLRLLQTNEPLWMKS-TTDGRD 254

Query: 373 VLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           VLN E Y R F      LK      EASR++G+VI+NSLALV+  MD N+W E+FP +++
Sbjct: 255 VLNLESYERIFPRANSHLKNPNVRIEASRDSGVVIMNSLALVDIFMDSNKWMELFPTIVS 314

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
              T +V+SSGM G ++G+LQLM+ ELQVLS LVP RE  FLR+C+Q  +G WA+VDVS 
Sbjct: 315 MARTLEVLSSGMMGGQSGSLQLMYGELQVLSSLVPTREFYFLRYCQQIEQGSWAIVDVSY 374

Query: 492 DTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIISGM 550
           D  R+   AP   +  RLPSGC++QDMPNGYSKVTWVEH E  D++  H+LY+ LI  G+
Sbjct: 375 DFPRDNQFAPQNPS-HRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRDLIHRGL 433

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+RW+ATLQR CE  A LM    S RD  G+
Sbjct: 434 AFGAERWLATLQRMCERFACLMVKGTSTRDLGGV 467


>gi|255555881|ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
 gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis]
          Length = 810

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/479 (49%), Positives = 330/479 (68%), Gaps = 26/479 (5%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E +S SGS+ ++  SG++ ++++ PP+KKRYHRHT +QIQE+ESLFKECPHPD+KQR++L
Sbjct: 60  EMDSGSGSEQLEEKSGNEQESSEQPPKKKRYHRHTARQIQEMESLFKECPHPDDKQRMKL 119

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+++N  ++  +RN IC +C
Sbjct: 120 SQDLGLKPRQVKFWFQNRRTQMKAQQDRADNIILRAENETLKSDNYRLQAELRNLICPSC 179

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGV 286
           GGPA++G IS EE  LR+ENARL+DEL+RVC +A ++ GRP+ ++GP PP    SLEL +
Sbjct: 180 GGPAMLGGISFEE--LRLENARLRDELERVCCVASRYGGRPIQAIGPAPPFIPPSLELDM 237

Query: 287 GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG----PGVTGLDRSIERSMFLE 342
                     S  +   P   GT        +     +      G+  ++   E+++ +E
Sbjct: 238 ----------SIYSKLFPDSLGTCNEMMPMSMPMLPDTSCLTEAGLVLMEE--EKALAME 285

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK---PNGFVTEAS 399
            AL++MDELVKM  T EPLWIR+ E  G++VLN EE+ R F   + LK    N   +EA+
Sbjct: 286 FALSSMDELVKMCHTTEPLWIRNNE-IGKEVLNFEEHERRFRWPLNLKQQNSNELRSEAT 344

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQ 459
           R++ +VI+NS+ LV+  +D N+W E+FP ++A   T  +++SG+ G  +G+L LMHAELQ
Sbjct: 345 RDSAVVIMNSITLVDAFLDANKWMELFPSIVAMARTVQILTSGVSGP-SGSLHLMHAELQ 403

Query: 460 VLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 518
           VLSPLVP RE  FLR+C+Q+  EG WA+VD  ID+  E   A +F   RR PSGCV+QDM
Sbjct: 404 VLSPLVPTREAYFLRYCQQNVEEGTWAIVDFPIDSFHEDIQA-SFPLYRRRPSGCVIQDM 462

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           PNGYS+VTWVEHAE +E  VHQ++   + SGM FGA RW+  LQRQCE +A LM+ ++S
Sbjct: 463 PNGYSRVTWVEHAETEEKPVHQIFSHFVYSGMAFGAHRWLGVLQRQCERVASLMARNIS 521


>gi|356529736|ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/492 (49%), Positives = 332/492 (67%), Gaps = 30/492 (6%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNM-DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           +GI+  R +E++   ES SGS+ + +  SG++ ++ + P +KKRYHRHT +QIQE+E+LF
Sbjct: 57  DGIL--RGKEEV---ESGSGSEQLVEDKSGNEQESHEQPTKKKRYHRHTARQIQEMEALF 111

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KECPHPD+KQRL+LS  L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L++EN 
Sbjct: 112 KECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENESLKSENY 171

Query: 214 SIRDAMRNPICTNCGGPAIIG-DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM 272
            ++ A+RN IC NCGGP I+G D+ L+E  +RIENARL++EL+RVC L  ++ GRP+ +M
Sbjct: 172 RLQAALRNVICPNCGGPCIMGADMGLDEHQVRIENARLREELERVCCLTTRYTGRPIQTM 231

Query: 273 GP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI---SNALPVVM-PPNRSGPG 327
              P +   SL+L +              +  P  F   I   +  +PV M PP  S   
Sbjct: 232 ATGPTLMAPSLDLDM--------------SIYPRHFADTIAPCTEMIPVPMLPPEASPFS 277

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCI 387
             G+    E+S+ LELA ++M ELVKM QT+EPLWIRS E S R+VLN EE+ R F    
Sbjct: 278 EGGILMEEEKSLTLELAASSMAELVKMCQTNEPLWIRSTE-SEREVLNFEEHARMFAWPQ 336

Query: 388 GLKPNG-FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
            LK      TEASR+T +VI+NS+ LV+  +D  +W E+FP +++R  T  +ISSG  G 
Sbjct: 337 NLKHRSELRTEASRDTSVVIMNSVTLVDAFLDAQKWMELFPTIVSRAKTVQIISSGASGL 396

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVN 505
            +G LQLM+AE QVLSPLV  RE +FLR+C+Q+A EG WA+VD  +D+  +         
Sbjct: 397 ASGTLQLMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRY 456

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           CRR  SGCV+QDMPNGYS+VTWVEHA+ +E  VHQ++   + SGM FGAQRW+  LQRQC
Sbjct: 457 CRR-SSGCVIQDMPNGYSRVTWVEHAKVEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQC 515

Query: 566 ECLAILMSTSVS 577
           E +A LM+ ++S
Sbjct: 516 ERVASLMARNIS 527


>gi|356529444|ref|XP_003533302.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 896

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/456 (51%), Positives = 315/456 (69%), Gaps = 19/456 (4%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 198 RKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 257

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +N  LR ENDK+R EN++IR+A++N IC +CGGP +  D   +EQ LR+ENA+LK+E
Sbjct: 258 ERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPMNDDCYFDEQKLRLENAQLKEE 317

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTI--NGFGGLSSTVTTTLPADFGTG 310
           LDRV ++A K++GRP+S + P  P+  SSL+L +GT    G GG S      L  D   G
Sbjct: 318 LDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGTFASQGLGGPS------LDLDLLPG 371

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
            S++  + +PP +  P        +++S+  ++A  AM+E++++ QT+EPLW++     G
Sbjct: 372 SSSSPMLNVPPFQ--PACLS---DMDKSLMSDIASNAMEEMIRLLQTNEPLWMKG--ADG 424

Query: 371 RQVLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           R VL+ + Y R F      LK      EASR++G+VI+N L LV+  MDPN+W E+FP +
Sbjct: 425 RDVLDLDSYERMFPKANSHLKNPNVHVEASRDSGVVIMNGLTLVDMFMDPNKWMELFPTI 484

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           +    T +VISSGM G+ +G+LQLM+ ELQVLSPLV  RE  FLR+C+Q  +G+WA+VDV
Sbjct: 485 VTMARTIEVISSGMMGSHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGLWAIVDV 544

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIIS 548
           S D  ++   AP +    RLPSG  +QDMPNGYSKVTW+EH E  D++ VH+LY+ LI S
Sbjct: 545 SYDFPQDNQFAPQY-RSHRLPSGVFIQDMPNGYSKVTWIEHVEIEDKTPVHRLYRNLIYS 603

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           G+ FGAQRW+ TLQR CE +A LM T  S RD  G+
Sbjct: 604 GIAFGAQRWLTTLQRMCERIACLMVTGNSTRDLGGV 639


>gi|356540579|ref|XP_003538765.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 732

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/499 (47%), Positives = 336/499 (67%), Gaps = 32/499 (6%)

Query: 84  DLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNP-PRKKRYHRHT 142
           D+   +     E  +G+  R+D  E+E++S +D MD  SGDD D   NP P+KK Y RHT
Sbjct: 15  DMSPHKTTACSESDLGKACRDD--EYETKSITDAMDAPSGDDQDP--NPRPKKKGYRRHT 70

Query: 143 PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
            +QI+E+E+ FK+ PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ER+EN++L+
Sbjct: 71  QRQIEEMEAFFKQFPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERNENAILK 130

Query: 203 QENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAG 262
            EN+KLRAEN   ++A+ N  C NCGG A +G++S +EQHLRIENARL++E+DR+  +A 
Sbjct: 131 TENEKLRAENNRYKEALSNATCPNCGGSAALGEMSFDEQHLRIENARLREEIDRISGIAA 190

Query: 263 KFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPN 322
           K++G+PV+S        ++  + VG    +G  S TV        G+ +  +LP   P +
Sbjct: 191 KYVGKPVTSSYSNLSSLNNNHVPVGK---YGSQSGTVGEMY---GGSDLFRSLPA--PAD 242

Query: 323 RSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRT 382
              P            M +ELA+AAM+EL ++AQ  +PLW+ S   S  ++LN EEYLRT
Sbjct: 243 ADKP------------MIVELAVAAMEELTRLAQAGDPLWVPSNHHS--EILNEEEYLRT 288

Query: 383 F-TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISS 441
           F    +G KP G  +EASRE+ +VI+N + L++ LMD N+W+ +F  +++R  T +V+S+
Sbjct: 289 FPNRGLGPKPLGLRSEASRESVVVIMNHINLIDILMDVNQWSTVFCGIVSRALTLEVLST 348

Query: 442 GMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP 501
           G+ G  NGALQ+M +E QV SPLVP RE  F+R+CKQ  +G+WAVVDVS+D +R  +   
Sbjct: 349 GVAGNYNGALQVMSSEFQVPSPLVPTRENYFVRYCKQQPDGIWAVVDVSLDNLRPNT--- 405

Query: 502 AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
                RR PSGC++Q++PNGYSKVTW+EH E D+  VH +Y+PL+ SG+ FGA+RWVATL
Sbjct: 406 -ISRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHSIYRPLVNSGLAFGAKRWVATL 464

Query: 562 QRQCECLAILMSTSVSARD 580
            RQCE LA  M+ ++ A D
Sbjct: 465 DRQCERLASSMANNIPAGD 483


>gi|242078393|ref|XP_002443965.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
 gi|241940315|gb|EES13460.1| hypothetical protein SORBIDRAFT_07g005180 [Sorghum bicolor]
          Length = 781

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/494 (48%), Positives = 320/494 (64%), Gaps = 31/494 (6%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDD--LDAADNPPRKKRYHRHTPQQIQEL 149
           +S + II  RS   + E ES+S S+N DG SGDD   D    P +KKRYHRHT  QIQE+
Sbjct: 55  DSSDNIIHGRSDTLVDEFESKSCSENPDGTSGDDGQEDPNQRPNKKKRYHRHTQHQIQEM 114

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 209
           E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ER EN+ LR ENDKLR
Sbjct: 115 EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRAENDKLR 174

Query: 210 AENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPV 269
           AENM  ++A+    C +CGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+P+
Sbjct: 175 AENMRYKEALGTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPM 234

Query: 270 SSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVT 329
            S   P + +        +     G        L AD   G+             G G  
Sbjct: 235 VSF--PVLSSPLAAAAARSPLDLAGAYGVQPGGLGADHLFGV-------------GAGAG 279

Query: 330 GLDRSI-------ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRT 382
            L RS+       ++ M +ELA+AAMDEL++MA+ D PLW     G     L+ EEY R 
Sbjct: 280 DLLRSVSTGQLDADKPMIVELAVAAMDELLRMARLDAPLWGGGVAGVQ---LDEEEYGRM 336

Query: 383 FTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG 442
           F   +G +  G   EASR+  +VI+   +LVE LMD NR+A +F  +++R +T +V+S+G
Sbjct: 337 FPGGLGPRQYGLRPEASRDNAVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTG 396

Query: 443 MGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA 502
           + G+ NGALQ+M  E QV SPLVP RE  F+R+CK + +G WAVVDVS+D++R +     
Sbjct: 397 VAGSYNGALQVMSMEFQVPSPLVPTRESYFVRYCKNNPDGTWAVVDVSLDSLRPSP---- 452

Query: 503 FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH LY+PL+ SG+ FGA+RWV TL 
Sbjct: 453 VMKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNLYRPLVNSGLAFGAKRWVGTLD 512

Query: 563 RQCECLAILMSTSV 576
           RQCE LA  M++++
Sbjct: 513 RQCERLASAMASNI 526


>gi|15220448|ref|NP_172015.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|30679181|ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|334182300|ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|75332091|sp|Q94C37.1|HDG2_ARATH RecName: Full=Homeobox-leucine zipper protein HDG2; AltName:
           Full=HD-ZIP protein HDG2; AltName: Full=Homeodomain
           GLABRA 2-like protein 2; AltName: Full=Homeodomain
           transcription factor HDG2; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 2
 gi|14334996|gb|AAK59762.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|20147145|gb|AAM10289.1| At1g05230/YUP8H12_16 [Arabidopsis thaliana]
 gi|222423025|dbj|BAH19495.1| AT1G05230 [Arabidopsis thaliana]
 gi|332189688|gb|AEE27809.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189689|gb|AEE27810.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189691|gb|AEE27812.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 721

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/468 (48%), Positives = 314/468 (67%), Gaps = 33/468 (7%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
           ++SGS+N +G SG+D D   +P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR +LS+ 
Sbjct: 42  TKSGSENQEGGSGNDQDPL-HPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRE 100

Query: 171 LCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 230
           L LE  QVKFWFQN+RTQMK   ERHENS LR EN+KLR +N+  R+A+ N  C NCGGP
Sbjct: 101 LNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGP 160

Query: 231 AIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTIN 290
             IG++S +E  LR+ENARL++E+DR+ A+A K++G+PVS+      P          + 
Sbjct: 161 TAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMG 220

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE 350
             GG +          +G   ++ L  +  P  S           ++ + ++L++AAM+E
Sbjct: 221 NIGGEA----------YGNNPNDLLKSITAPTES-----------DKPVIIDLSVAAMEE 259

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           L++M Q DEPLW +S       VL+ EEY RTF   IG +P G+ +EASRE+ +VI+N +
Sbjct: 260 LMRMVQVDEPLW-KSL------VLDEEEYARTFPRGIGPRPAGYRSEASRESAVVIMNHV 312

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
            +VE LMD N+W+ +F  M++R  T  V+S+G+ G  NGALQ+M AE QV SPLVP RE 
Sbjct: 313 NIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRET 372

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
            F R+CKQ  +G WAVVD+S+D+++    A     CRR  SGC++Q++PNGYSKVTWVEH
Sbjct: 373 YFARYCKQQGDGSWAVVDISLDSLQPNPPA----RCRRRASGCLIQELPNGYSKVTWVEH 428

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
            E D+  VH LYK ++ +G  FGA+RWVA L RQCE LA +M+T++S+
Sbjct: 429 VEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISS 476


>gi|186478150|ref|NP_001117231.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
 gi|332189690|gb|AEE27811.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana]
          Length = 719

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/468 (48%), Positives = 314/468 (67%), Gaps = 33/468 (7%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
           ++SGS+N +G SG+D D   +P +KKRYHRHT  QIQE+E+ FKECPHPD+KQR +LS+ 
Sbjct: 42  TKSGSENQEGGSGNDQDPL-HPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRE 100

Query: 171 LCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 230
           L LE  QVKFWFQN+RTQMK   ERHENS LR EN+KLR +N+  R+A+ N  C NCGGP
Sbjct: 101 LNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNLRYREALANASCPNCGGP 160

Query: 231 AIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTIN 290
             IG++S +E  LR+ENARL++E+DR+ A+A K++G+PVS+      P          + 
Sbjct: 161 TAIGEMSFDEHQLRLENARLREEIDRISAIAAKYVGKPVSNYPLMSPPPLPPRPLELAMG 220

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE 350
             GG +          +G   ++ L  +  P  S           ++ + ++L++AAM+E
Sbjct: 221 NIGGEA----------YGNNPNDLLKSITAPTES-----------DKPVIIDLSVAAMEE 259

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           L++M Q DEPLW +S       VL+ EEY RTF   IG +P G+ +EASRE+ +VI+N +
Sbjct: 260 LMRMVQVDEPLW-KSL------VLDEEEYARTFPRGIGPRPAGYRSEASRESAVVIMNHV 312

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
            +VE LMD N+W+ +F  M++R  T  V+S+G+ G  NGALQ+M AE QV SPLVP RE 
Sbjct: 313 NIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRET 372

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
            F R+CKQ  +G WAVVD+S+D+++    A     CRR  SGC++Q++PNGYSKVTWVEH
Sbjct: 373 YFARYCKQQGDGSWAVVDISLDSLQPNPPA----RCRRRASGCLIQELPNGYSKVTWVEH 428

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
            E D+  VH LYK ++ +G  FGA+RWVA L RQCE LA +M+T++S+
Sbjct: 429 VEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISS 476


>gi|302787511|ref|XP_002975525.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
 gi|300156526|gb|EFJ23154.1| hypothetical protein SELMODRAFT_450555 [Selaginella moellendorffii]
          Length = 675

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/484 (49%), Positives = 321/484 (66%), Gaps = 77/484 (15%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           M+GAS +D + +D PPRK+R+HRHT +QIQE+E +FKECPHPDEKQR++LS+ L LE RQ
Sbjct: 1   MEGASSEDQEPSDQPPRKRRFHRHTLRQIQEMEMVFKECPHPDEKQRMQLSRELGLEPRQ 60

Query: 178 VKFWFQNRRTQMKTQL----------ERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           VKFWFQNRRTQMK  +          ER ENS+LR EN++LR+EN+++R+A++N  C +C
Sbjct: 61  VKFWFQNRRTQMKVSIKVFEENQAHQERAENSMLRAENERLRSENIAMREALKNATCPHC 120

Query: 228 GGPAIIGDISLEEQHLRIENARLKDE--LDRVCALAGKFLGRPVSSMGPPPMPNSS-LEL 284
           GGPA +G++S +EQ LRIENA LKDE  LDRV +LA K+L +P SS      P  S LEL
Sbjct: 121 GGPATLGEMSYDEQQLRIENAHLKDEVQLDRVSSLAAKYLSKPPSSSALAVTPGPSMLEL 180

Query: 285 GVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
                   GGLS                                      +E+ +  ELA
Sbjct: 181 ATRP----GGLSQ-------------------------------------VEKPLVAELA 199

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           + AM+EL+ +AQ+ EPLWI   E   ++ LN EEY++ F+  +G  P G  +E +R+TG+
Sbjct: 200 IIAMEELLALAQSREPLWILE-ENGAKESLNGEEYMQQFSRGLGPTPVGLKSEVTRDTGL 258

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL-MHAELQVLSP 463
           V++N  ALV+T+MD  RW +MF C+I+R  T++V+S+G+GG  N ALQL M+AE QVLSP
Sbjct: 259 VMMNGAALVDTIMDA-RWMDMFSCIISRALTSEVLSTGVGGNWNNALQLVMYAEFQVLSP 317

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
           LVP RE  FLR+CKQHAEGVWA+VDVS+D                  SG ++QDMPNGYS
Sbjct: 318 LVPTREAYFLRYCKQHAEGVWAIVDVSVDG-----------------SGFLIQDMPNGYS 360

Query: 524 KVTWV---EHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           KV+ V   +H EYD+ QV+ +Y+ L+ SG+ FGA+RW+ATLQRQCE LA+L++T++S RD
Sbjct: 361 KVSQVTILQHMEYDDRQVNNMYRGLVSSGLAFGAKRWLATLQRQCERLAVLLATNISPRD 420

Query: 581 HTGI 584
             G+
Sbjct: 421 LGGV 424


>gi|345195184|tpg|DAA34957.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413919601|gb|AFW59533.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 742

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/489 (49%), Positives = 319/489 (65%), Gaps = 33/489 (6%)

Query: 108 EHESRSGSDNMDG-ASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           E ES+SGS+N+DG  S D+L D    P +KKRYHRHT  QIQELE+ FKECPHPD+KQR 
Sbjct: 16  EFESKSGSENVDGGVSVDELQDPNQRPSKKKRYHRHTQHQIQELEAFFKECPHPDDKQRK 75

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELS+ L LE  QVKFWFQN+RTQMK   ER ENS LR EN+KLRAENM  ++A+ +  C 
Sbjct: 76  ELSRELGLEPLQVKFWFQNKRTQMKNHHERQENSQLRSENEKLRAENMRYKEALSSASCP 135

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELG 285
           +CGGPA +G++S +E HLR+ENARL++E+DR+ ++A K++GRP   M P P+ +S L   
Sbjct: 136 SCGGPAALGEMSFDEHHLRVENARLREEVDRISSIAAKYVGRP---MVPFPVLSSPL--- 189

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGV-----------TGLDRS 334
                   G  +      P D       A  +                        +   
Sbjct: 190 -------AGAGARAPALPPLDMAPPYGAAADMFGGGGVVAAAGAAGAGDLLLRGAAVQSD 242

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLW--IRSFEGSG-RQVLNHEEYLRTFTPCIGLKP 391
            ++ M +ELA+AAM+ELV+MAQ DEPLW      +GS   + LN EEY R F   +G KP
Sbjct: 243 ADKPMIVELAVAAMEELVRMAQLDEPLWNAPAGLDGSAEEETLNEEEYARLFPGGLGPKP 302

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
            G  +EASR++ +VI+    LVE LMD N++A +F  +++R AT +V+S+G+ G  NGAL
Sbjct: 303 YGLNSEASRDSAVVIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGAL 362

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPS 511
           Q+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D +R      A + CRR PS
Sbjct: 363 QVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDGLRPG----AVLKCRRRPS 418

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           GC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL RQCE LA +
Sbjct: 419 GCLIQEMPNGYSKVTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASV 478

Query: 572 MSTSVSARD 580
           M++++   D
Sbjct: 479 MASNIPTSD 487


>gi|224125934|ref|XP_002329753.1| predicted protein [Populus trichocarpa]
 gi|222870661|gb|EEF07792.1| predicted protein [Populus trichocarpa]
          Length = 725

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/459 (51%), Positives = 309/459 (67%), Gaps = 33/459 (7%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ+LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 26  RKKRYHRHTALQIQKLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 85

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +NS LR ENDK+R EN++IR+A++N IC +CGGP +  D   +E  LR+EN +LK+E
Sbjct: 86  ERADNSSLRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEHKLRMENVQLKEE 145

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTI--NGFGGLSSTVTTTLPADFGTG 310
           LDRV ++A K++GRP+S + P  P   SSL+L +G     G GG S      L  D    
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQPFHISSLDLSMGNFGAQGIGGPS------LDLDLIPT 199

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
            SN      PP  S          +++S+  ++A  AM+EL+++ QT+EPLW++S    G
Sbjct: 200 SSNL--AFQPPVIS---------DMDKSLMTDVAANAMEELLRLLQTNEPLWMKS-SADG 247

Query: 371 RQVLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           R VLN + Y R F   +  LK      EASR++G+VI+N +ALV+  MD N+W E FP M
Sbjct: 248 RDVLNLDSYQRIFPRAMSHLKNPNVRIEASRDSGVVIMNGVALVDMFMDSNKWVESFPTM 307

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           ++   T +VISSGM G+ +G+LQLM+ ELQVLSPLVP RE   LR+C+Q  +G+WA+V V
Sbjct: 308 VSVAKTIEVISSGMLGSHSGSLQLMYEELQVLSPLVPTREFCILRYCQQIEQGLWAIVSV 367

Query: 490 SIDTIRETSGAPAFVN---CRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPL 545
           S D        P F +   C RLPSGC++QDMPNGYSKVTWVEH E  D++  HQLY+ L
Sbjct: 368 SYDI-------PQFASQFRCHRLPSGCLIQDMPNGYSKVTWVEHVEIEDKTTTHQLYRDL 420

Query: 546 IISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           I SGM FGA+RW+ATLQR CE +A  M +  S RD  G+
Sbjct: 421 IHSGMAFGAERWLATLQRMCERVACQMVSGNSTRDLGGV 459


>gi|449439589|ref|XP_004137568.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
 gi|449517265|ref|XP_004165666.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 705

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/473 (50%), Positives = 320/473 (67%), Gaps = 19/473 (4%)

Query: 117 NMDGASGDDLDAADNPPR-KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           +  G SG D D + +P R KKRYHRH   QIQ LE++FKECPHPDEKQRL+LS+ L L  
Sbjct: 2   DFGGGSGWDNDPSSDPQRRKKRYHRHNANQIQRLEAMFKECPHPDEKQRLQLSRELGLAP 61

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD 235
           RQ+KFWFQNRRTQMK Q ER +NS LR ENDK+R EN++IR+A++N IC +CGGP  + D
Sbjct: 62  RQIKFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPP-LQD 120

Query: 236 ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN--SSLELGVGTINGFG 293
              +E  LRIENA LK+ELDRV ++A K++GRP+S + PP  P+  SSLEL +G+     
Sbjct: 121 PYFDEHKLRIENAHLKEELDRVSSIAAKYIGRPISQL-PPIQPSHFSSLELSMGSFPSQE 179

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
               ++   L +   T + N LP   P + S         ++++S+  E+A  AM EL++
Sbjct: 180 MGCPSLDLDLLSASSTSVPN-LPYHHPIHLS---------TVDKSLMTEIATNAMAELLR 229

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTF-TPCIGLKPNGFVTEASRETGMVIINSLAL 412
           ++QT+EP W++S    GR +L+ E Y   F  P   LK   F TEASR++G+VII+S AL
Sbjct: 230 LSQTNEPFWMKS-PTDGRDLLDLETYEHAFPRPNTPLKNLHFRTEASRDSGVVIISSAAL 288

Query: 413 VETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNF 472
           V+  MD N+W E+FP +++   T +V+SSGM G++NG+LQLM+ ELQ+LSPLVP R   F
Sbjct: 289 VDIFMDSNKWTELFPTIVSVARTLEVVSSGMLGSQNGSLQLMYQELQLLSPLVPTRHFYF 348

Query: 473 LRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAE 532
           +R+C+Q  +GVWAVVDVS +  RE     +   C R PSGC++QDMPNGYSKVTW+EH E
Sbjct: 349 IRYCQQIEQGVWAVVDVSYNIPRENQIV-SHPQCHRFPSGCLIQDMPNGYSKVTWIEHVE 407

Query: 533 Y-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
             D    H L++ LI SG+ FGA+RW+ATLQR  E  A LM TS S +D  G+
Sbjct: 408 VEDRGSTHWLFRDLIHSGLAFGAERWLATLQRMSERFACLMVTSSSNQDLGGV 460


>gi|15242290|ref|NP_200030.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
 gi|75180477|sp|Q9LTK3.1|HDG7_ARATH RecName: Full=Homeobox-leucine zipper protein HDG7; AltName:
           Full=HD-ZIP protein HDG7; AltName: Full=Homeodomain
           GLABRA 2-like protein 7; AltName: Full=Homeodomain
           transcription factor HDG7; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 7
 gi|8885530|dbj|BAA97460.1| homeodomain transcription factor-like [Arabidopsis thaliana]
 gi|332008796|gb|AED96179.1| homeobox-leucine zipper protein HDG7 [Arabidopsis thaliana]
          Length = 682

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/487 (48%), Positives = 314/487 (64%), Gaps = 74/487 (15%)

Query: 108 EHESRSGSDN-MDGASGDDLDAADNPPRKKR---YHRHTPQQIQELESLFKECPHPDEKQ 163
           E ESRS SD+  D  SGD+      P +KKR   YHRHT  QIQELES FKECPHP+EKQ
Sbjct: 27  EFESRSLSDDSFDAMSGDEDKQEQRPKKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQ 86

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           RLEL K+L LE++Q+KFWFQNRRTQMKTQLERHEN +L+QEN+KLR EN  ++++MR  +
Sbjct: 87  RLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQENEKLRLENSFLKESMRGSL 146

Query: 224 CTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLE 283
           C +CGG  I G++S E+  LRIENA+LK+ELDR+CALA +F+G                 
Sbjct: 147 CIDCGGAVIPGEVSFEQHQLRIENAKLKEELDRICALANRFIG----------------- 189

Query: 284 LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
                         +++   P++ G G S  LP+         G T L       MF++L
Sbjct: 190 -------------GSISLEQPSNGGIG-SQHLPI----GHCVSGGTSL-------MFMDL 224

Query: 344 ALAAMDELVKMAQTDEPLWI-RSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           A+ AMDEL+K+A+ +  LW  +S +GS    +NH                      SRET
Sbjct: 225 AMEAMDELLKLAELETSLWSSKSEKGS----MNH-------------------FPGSRET 261

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V+INSLALVETLMD N+WAEMF C++A  +T +VIS+G  G+RNG++ LM AE QV+S
Sbjct: 262 GLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMS 321

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           PLVP+++  FLR+CKQH +G+WAVVDVS D  R      ++   +  PSGC++QD+ NG 
Sbjct: 322 PLVPIKQKKFLRYCKQHGDGLWAVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDIGNGC 381

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHT 582
           SKVTW+EH+EY+ES  H LY+PL+ S +G GA +W+ATLQRQCE   +L+S+     DHT
Sbjct: 382 SKVTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSS----EDHT 437

Query: 583 GIYDINT 589
           G+    T
Sbjct: 438 GLSHAGT 444


>gi|224071383|ref|XP_002303433.1| predicted protein [Populus trichocarpa]
 gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa]
          Length = 774

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/477 (49%), Positives = 325/477 (68%), Gaps = 23/477 (4%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES SGS+ ++  SG++ ++++ PP+KKRYHRHT  QIQE+E++FKECPHPD+KQR+ L
Sbjct: 60  EMESGSGSEQLEDRSGNEQESSEQPPKKKRYHRHTAAQIQEMEAMFKECPHPDDKQRMRL 119

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S+ L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+ +N  ++  +RN IC NC
Sbjct: 120 SQELGLKPRQVKFWFQNRRTQMKAQQDRSDNLILRAENESLKNDNYRLQAELRNLICPNC 179

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGV 286
           GG A++G I  EE  LR+ENARL+DEL+RVC +  ++ GR + SM P P     SL+L +
Sbjct: 180 GGQAMLGAIPFEE--LRLENARLRDELERVCCITSRYGGRQIHSMVPVPSFVPPSLDLDM 237

Query: 287 GTIN-GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGP--GVTGLDRSIERSMFLEL 343
              +  F     T T  +P          +PV+  P+ S P  GV  ++    + + +EL
Sbjct: 238 NMYSRPFPEYLGTCTDMMPV--------PVPVLEEPS-SFPEAGVVLMEEG--KGLAMEL 286

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG--FVTEASRE 401
           AL++MDELVKM   +EPLWIR+ E +G++VLN EE+ R F     LK N     TEA+R+
Sbjct: 287 ALSSMDELVKMCHANEPLWIRNIE-NGKEVLNLEEHGRMFPWPSNLKQNSSETRTEATRD 345

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
             +VI+NS+ LV+  +D N+W E+FP ++AR  T  VI+ G+ G  +G+L LM+AELQVL
Sbjct: 346 CAVVIMNSITLVDAFLDANKWMELFPSIVARAKTVQVITPGISGA-SGSLHLMYAELQVL 404

Query: 462 SPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPN 520
           SPLVP RE  FLRFC Q+  EG WA+VD  +D + +    P+F   +R PSGCV+QDMPN
Sbjct: 405 SPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNI-QPSFPLYKRHPSGCVIQDMPN 463

Query: 521 GYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           GYS+VTW+EHAE +E  VHQ++   + SGM FGA RW+  LQRQCE +A LM+ ++S
Sbjct: 464 GYSRVTWIEHAEIEEKPVHQIFSQYVYSGMAFGAHRWLTVLQRQCERVASLMARNIS 520


>gi|125591714|gb|EAZ32064.1| hypothetical protein OsJ_16252 [Oryza sativa Japonica Group]
          Length = 779

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/498 (47%), Positives = 322/498 (64%), Gaps = 34/498 (6%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 57  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 115

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHENS LR +N+KL
Sbjct: 116 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKL 175

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDEL--DRVCALAGKFLG 266
           RAENM  ++A+ +  C NCGGPA +G++S +E HLRIENARL++E   DR     G+  G
Sbjct: 176 RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEDIGDR-----GEVRG 230

Query: 267 RPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGP 326
               ++     P+    +        G +  T         G  +   +P        G 
Sbjct: 231 EANGAVPGAVEPDGGGGVAGAAGPPRGAVRRT---------GRHVRRPVP-------RGS 274

Query: 327 GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS----FEGSGRQVLNHEEYLRT 382
              GL   +++ M +ELA+AAM+ELV+MAQ DEPLW  +       +  + L+ EEY R 
Sbjct: 275 CCAGLQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARM 334

Query: 383 FTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG 442
           F   +G K  G  +EASR++ +VI+    LVE LMD N++A +F  +++R  T +V+S+G
Sbjct: 335 FPRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTG 394

Query: 443 MGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA 502
           + G  NGALQ+M  E QV SPLVP RE  F+R+CKQ+A+G WAVVDVS+D++R +     
Sbjct: 395 VAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPS----P 450

Query: 503 FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL 
Sbjct: 451 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 510

Query: 563 RQCECLAILMSTSVSARD 580
           RQCE LA +M++++   D
Sbjct: 511 RQCERLASVMASNIPTSD 528


>gi|357485047|ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
 gi|355514146|gb|AES95769.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
          Length = 801

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/491 (47%), Positives = 326/491 (66%), Gaps = 26/491 (5%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNMDGASGDD--LDAADNPPRKKRYHRHTPQQIQELESL 152
           EGI+  R +E++++ +S SGS+ ++  SG++  ++      +KKRYHRHT +QIQE+E+L
Sbjct: 51  EGIL--RGKEEIMD-QSGSGSEQVEDKSGNEQEINNEQQATKKKRYHRHTARQIQEMEAL 107

Query: 153 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FKECPHPD+KQRL+LS  L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+ EN
Sbjct: 108 FKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENESLKNEN 167

Query: 213 MSIRDAMRNPICTNCGGPAIIG-DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS 271
             ++ A+RN +C NCGGP I+G D+  ++  LR ENARLK+EL+RVC +  ++ GRP+ +
Sbjct: 168 YRLQSALRNILCPNCGGPCIMGPDMGFDDHQLRFENARLKEELERVCCITSRYTGRPLQT 227

Query: 272 MGPPP--MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVT 329
           M PP   MP  SL+L +             T  +P             ++PP  S     
Sbjct: 228 MAPPSSLMP-PSLDLDMNIYPRHFDPMPPCTEMIPVP-----------MLPPEPSQFQEG 275

Query: 330 G-LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIG 388
           G L    E+S+ +ELA ++M ELVKM Q +EPLWIRS   + R+VLN +E+ R F   + 
Sbjct: 276 GLLLMEDEKSLAMELAASSMAELVKMCQMNEPLWIRS--ENDREVLNFDEHARVFQWPLN 333

Query: 389 LKP-NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR 447
           LK  N    EA+R++ +VI+NS+ LV+  +D  +W E+FP ++AR  T  +I+SG  G  
Sbjct: 334 LKQRNELRNEATRDSAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHA 393

Query: 448 NGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNC 506
           +G LQLMHAE QVLSPLV  RE +FLR+C+Q+A EG WA+VD  +D+ ++         C
Sbjct: 394 SGTLQLMHAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFQQNFHNSCPKYC 453

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RR  SGCV+QDMPNGYS+VTWVEHA+  E  VHQ++   + SGM FGAQRW+  LQRQCE
Sbjct: 454 RR-SSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQIFSNYVYSGMAFGAQRWLGVLQRQCE 512

Query: 567 CLAILMSTSVS 577
            +A LM+ ++S
Sbjct: 513 RVASLMARNIS 523


>gi|357144757|ref|XP_003573403.1| PREDICTED: homeobox-leucine zipper protein ROC1-like [Brachypodium
           distachyon]
          Length = 812

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/459 (50%), Positives = 307/459 (66%), Gaps = 26/459 (5%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D    P +KKRYHRHT  QIQELE+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+R
Sbjct: 111 DPNQRPRKKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKR 170

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQMK Q E+ ENS LR ENDKLRAENM  ++A+ +  C +CGGPA +G++S +E HLR++
Sbjct: 171 TQMKNQHEKQENSQLRAENDKLRAENMRYKEALSSASCPSCGGPAALGEMSFDEHHLRVD 230

Query: 247 NARLKDELDRVCALAGKFL---GRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTL 303
           NARL+DE+DR+ A+A K +   G+P+    P PMP + L     +   F GLS  V    
Sbjct: 231 NARLRDEIDRISAIAAKHVAATGKPM----PFPMPMAGLSSSAAS---FHGLSPAVAARS 283

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRS-----IERSMFLELALAAMDELVKMAQTD 358
           P D    +  A          G G   L RS     +++ + +ELA+AAMDEL++MA+ D
Sbjct: 284 PLD----LVGAYGGGGDMFGGGAGAGDLMRSHGLGDVDKPLIVELAVAAMDELLQMARVD 339

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTF-TPCIGLKPNGFVTEASRETGMVIINSLALVETLM 417
           EPLW  S   +G   L  EEY R +    +G +  G   EASR   +VI+   +LVE LM
Sbjct: 340 EPLW--SSSATGEAALEEEEYGRVYGARGLGPRQYGLKPEASRGANVVIMTHASLVEILM 397

Query: 418 DPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCK 477
           D N++A +F  +++R +T +V+S+G+ G  +GALQ+M  E QV SPLVP RE  F+R+CK
Sbjct: 398 DVNQFATVFSSIVSRASTHEVLSTGVAGNYDGALQVMSMEFQVPSPLVPTRESYFVRYCK 457

Query: 478 QHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ 537
            + EG WAVVDVS+D++R +   PA V CRR PSGC++Q++PNGYSKVTWVEH E D+  
Sbjct: 458 HNPEGSWAVVDVSLDSLRPS---PA-VKCRRRPSGCLIQELPNGYSKVTWVEHVEVDDRS 513

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++S+
Sbjct: 514 VHDIYKPLVNSGLAFGAKRWVGTLGRQCERLASAMASSI 552


>gi|356524732|ref|XP_003530982.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 721

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/462 (49%), Positives = 315/462 (68%), Gaps = 17/462 (3%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D +D+  R+KRYHRHT  QIQ LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRR
Sbjct: 17  DGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRR 76

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQMK Q ER +N  LR +NDK+R EN++IR+A++N IC +CG P +  D   ++Q LR+E
Sbjct: 77  TQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGAPPLNDDCYFDDQKLRLE 136

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPA 305
           NA LK+ELDRV ++A K++GRP+S + P  P+  SSL+L + +  G  G+     ++L  
Sbjct: 137 NAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASY-GNQGMVGPAPSSLNL 195

Query: 306 DF--GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 363
           D     G S++     PP  S          +++S+  ++A  AM+E +++ QT+EPLW+
Sbjct: 196 DLLPAAGTSSSSMPYHPPCLS---------DMDKSLMSDIASNAMEEFLRLVQTNEPLWL 246

Query: 364 RSFEGSGRQVLNHEEYLRTF-TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
           +S     R VL+ + Y R F  P    K      EASR++G+V++N+LALV+  MDPN+W
Sbjct: 247 KS-NVDARDVLSCDAYERMFHKPNTRPKNPNVRIEASRDSGVVLMNTLALVDMFMDPNKW 305

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
            ++FP +++   T  VISSGM G+ +G+LQLM+ ELQVLSPLV  RE  FLR+C+Q  +G
Sbjct: 306 IQLFPTIVSVARTIQVISSGMMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQG 365

Query: 483 VWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQL 541
            WAV+DVS D  +++  AP F    R PSGC++QDMP+G+SK+TWVEH E  D++  H+L
Sbjct: 366 TWAVMDVSYDFPQDSHYAPQF-RSHRCPSGCLIQDMPDGHSKITWVEHVEIEDKTLPHRL 424

Query: 542 YKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           Y+ LI SGM FGA+RW+ TLQR CE L  LM+TS   RD+ G
Sbjct: 425 YRNLIYSGMAFGAERWLTTLQRMCERLTYLMATSNPTRDNLG 466


>gi|2388574|gb|AAB71455.1| Strong similarity to Phalaenopsis homeobox protein (gb|U34743)
           [Arabidopsis thaliana]
          Length = 749

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/494 (45%), Positives = 314/494 (63%), Gaps = 59/494 (11%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELES------------------- 151
           ++SGS+N +G SG+D D   +P +KKRYHRHT  QIQE+E+                   
Sbjct: 32  TKSGSENQEGGSGNDQDPL-HPNKKKRYHRHTQLQIQEMEAYVFNLLTYFNFLVCFLTIL 90

Query: 152 -------LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 204
                   FKECPHPD+KQR +LS+ L LE  QVKFWFQN+RTQMK   ERHENS LR E
Sbjct: 91  LFWLLNRFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAE 150

Query: 205 NDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKF 264
           N+KLR +N+  R+A+ N  C NCGGP  IG++S +E  LR+ENARL++E+DR+ A+A K+
Sbjct: 151 NEKLRNDNLRYREALANASCPNCGGPTAIGEMSFDEHQLRLENARLREEIDRISAIAAKY 210

Query: 265 LGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS 324
           +G+PVS+      P          +   GG +          +G   ++ L  +  P  S
Sbjct: 211 VGKPVSNYPLMSPPPLPPRPLELAMGNIGGEA----------YGNNPNDLLKSITAPTES 260

Query: 325 GPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT 384
                      ++ + ++L++AAM+EL++M Q DEPLW +S       VL+ EEY RTF 
Sbjct: 261 -----------DKPVIIDLSVAAMEELMRMVQVDEPLW-KSL------VLDEEEYARTFP 302

Query: 385 PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMG 444
             IG +P G+ +EASRE+ +VI+N + +VE LMD N+W+ +F  M++R  T  V+S+G+ 
Sbjct: 303 RGIGPRPAGYRSEASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVA 362

Query: 445 GTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFV 504
           G  NGALQ+M AE QV SPLVP RE  F R+CKQ  +G WAVVD+S+D+++    A    
Sbjct: 363 GNYNGALQVMSAEFQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPA---- 418

Query: 505 NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
            CRR  SGC++Q++PNGYSKVTWVEH E D+  VH LYK ++ +G  FGA+RWVA L RQ
Sbjct: 419 RCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQ 478

Query: 565 CECLAILMSTSVSA 578
           CE LA +M+T++S+
Sbjct: 479 CERLASVMATNISS 492


>gi|356561849|ref|XP_003549189.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 718

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/462 (50%), Positives = 315/462 (68%), Gaps = 19/462 (4%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           ++D+  RKKRYHRHT  QIQ LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRRT
Sbjct: 18  SSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRT 77

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q ER +N  LR ENDK+R EN++IR+A++N IC +CGGP +  D   +EQ LR+EN
Sbjct: 78  QMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPMNDDCYFDEQKLRLEN 137

Query: 248 ARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTI--NGFGGLSSTVTTTLP 304
           A+LK+ELDRV ++A K++GRP+S + P  P+  SSL+L +GT    G GG S  +   LP
Sbjct: 138 AQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGTFASQGLGGPSLDL-DLLP 196

Query: 305 ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR 364
               + + N +P   PP  S          +++S+  ++A  AM+E++++ QT+EPLW++
Sbjct: 197 GSSSSSMPN-VPPFQPPCLS---------DMDKSLMSDIASNAMEEMIRLLQTNEPLWMK 246

Query: 365 SFEGSGRQVLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWA 423
                GR VL+ + Y R F      LK      EASR++G+VI+N L LV+  MDPN+W 
Sbjct: 247 G--ADGRDVLDLDSYERMFPKANSHLKNPNVHVEASRDSGVVIMNGLTLVDMFMDPNKWM 304

Query: 424 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 483
           E+F  ++    T +VISSGM G   G+LQLM+ ELQVLSPLV  RE  FLR+C+Q  +G+
Sbjct: 305 ELFSTIVTMARTIEVISSGMMGGHGGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGL 364

Query: 484 WAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLY 542
           WA+VDVS D  ++   AP F    RLPSG  +QDMPNGYSKVTW+EH E  D++ VH+LY
Sbjct: 365 WAIVDVSYDFTQDNQFAPQF-RSHRLPSGVFIQDMPNGYSKVTWIEHVEIEDKTPVHRLY 423

Query: 543 KPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           + +I SG+ FGAQRW+ TLQR CE +A L+ T  S RD  G+
Sbjct: 424 RNIIYSGIAFGAQRWLTTLQRMCERIACLLVTGNSTRDLGGV 465


>gi|356511234|ref|XP_003524332.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/463 (48%), Positives = 315/463 (68%), Gaps = 17/463 (3%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D +D+  R+KRYHRHT  QIQ LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQNRR
Sbjct: 13  DGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRR 72

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQMK Q ER +N  LR +NDK+R EN++IR+A++N IC +CGGP +  D    +  LR+E
Sbjct: 73  TQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGGPPLNDDSYFNDHKLRLE 132

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPA 305
           NA LK+ELDRV ++A K++GRP+S + P  P+  SSL+L + +    G +      +L  
Sbjct: 133 NAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGNQGMVGPAPAPSLNL 192

Query: 306 D-FGTGISNALPVV--MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW 362
           D    G S+++P +   PP  S          +++S+  ++A  AM+E +++ QT+EPLW
Sbjct: 193 DLLPAGTSSSMPNLPYQPPCLS---------DMDKSLMSDIASNAMEEFLRLVQTNEPLW 243

Query: 363 IRSFEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
           ++S     R VL+ + Y R F+ P    K      EASR++G+V++NSLALV+  MDPN+
Sbjct: 244 LKS-NVDRRDVLSSDAYDRMFSKPNTRSKNPNVRIEASRDSGVVLLNSLALVDMFMDPNK 302

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W ++FP +++   T  VISSG+ G+ +G+LQLM+ ELQVLSPLV  RE  FLR+C+Q  +
Sbjct: 303 WIQLFPTIVSVARTIQVISSGVMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQ 362

Query: 482 GVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQ 540
           G WAV+DVS D  +++  AP F    R PSGC++QDMP+G+SK+TW+EH E  D++  H+
Sbjct: 363 GTWAVMDVSYDFPQDSHFAPQF-RSHRCPSGCLIQDMPDGHSKITWIEHVEIEDKTLPHR 421

Query: 541 LYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           LY+ LI SGM FGA+RW+ TLQR CE    LM+TS   RD+ G
Sbjct: 422 LYRNLIYSGMAFGAERWLTTLQRMCERFTYLMATSNPTRDNLG 464


>gi|51872287|gb|AAU12247.1| homeodomain protein HOX3 [Gossypium hirsutum]
          Length = 713

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/472 (49%), Positives = 315/472 (66%), Gaps = 35/472 (7%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D D++D   RKK YHRHT  QIQ LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQN
Sbjct: 18  DHDSSDLSRRKKPYHRHTAHQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQN 77

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           RRTQMK Q ER +NS LR ENDK+R EN++IR+A++N IC +CGGP    D   ++Q +R
Sbjct: 78  RRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPANEDSYFDDQKMR 137

Query: 245 IENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTL 303
           +ENA+LK+ELDRV ++A K++GRP+S + P  P+  SSL+  + + +G+G        +L
Sbjct: 138 MENAQLKEELDRVSSIAAKYIGRPISQLPPVQPVHISSLDFRMASFDGYG---VGAGPSL 194

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 363
             D   G S+++P +       P    +   I++S+  ++A  AM+EL+++ QT+EPLWI
Sbjct: 195 DLDLLPGSSSSMPNL-------PFQPVVISDIDKSLMSDIAANAMEELLRLLQTNEPLWI 247

Query: 364 RSFEGSGRQVLNHEEYLRTFTPCIGLKPN-------GFVTEASRETGMVIINSLALVETL 416
           +S    G+  LN E Y R F      KPN           EASR++G+VI+N LALV+  
Sbjct: 248 KS-TNDGKDALNLESYERIFP-----KPNNTHFKSPNIRVEASRDSGVVIMNGLALVDMF 301

Query: 417 MDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFC 476
           MD N+W E+FP +++   T +VIS GM GT   +LQLM+ ELQVLSPLVP RE   LR+C
Sbjct: 302 MDSNKWLELFPTIVSIAKTIEVISPGMLGTHRCSLQLMYEELQVLSPLVPTREFYTLRYC 361

Query: 477 KQHAEGVWAVVDVSIDTIRETSGAPAFVN-CR--RLPSGCVVQDMPNGYSKVTWVEHAEY 533
           +Q  +G+WA+V+VS D        P F + CR  RLPSGC++QDMPNGYSKVTW+E  E 
Sbjct: 362 QQIEQGLWAIVNVSYDL-------PQFASQCRSHRLPSGCLIQDMPNGYSKVTWLERVEI 414

Query: 534 -DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            D++ +H+LY+ L+ SG  FGA+RW+ TLQR CE  A L  +S S RD  G+
Sbjct: 415 EDKTPIHRLYRDLVHSGSAFGAERWLTTLQRMCEWFACLRVSSTSTRDLGGV 466


>gi|449530931|ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/534 (45%), Positives = 347/534 (64%), Gaps = 34/534 (6%)

Query: 59  SKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDN- 117
           ++S+F+SP     +Q PN +           + +   G++ R  +ED+   ES SGS+  
Sbjct: 19  TESLFSSP-----IQNPNFNFISNFQHFPSIVPKEENGLMMRGGKEDM---ESGSGSEQL 70

Query: 118 --------MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
                   M+    ++        +KKRYHRHT +QIQE+E+LFKECPHPD+KQRL+LS+
Sbjct: 71  VEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQ 130

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+ EN  ++ A+RN IC +CGG
Sbjct: 131 ELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENETLKNENYRLQSALRNIICPSCGG 190

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVG 287
             I+G+ SL+EQ LR+ENARL+D+L++VC++  ++ GRP+ +M    PP+   SL+L + 
Sbjct: 191 QGILGEPSLDEQQLRLENARLRDQLEQVCSMTTRYTGRPIQAMASAAPPLMQPSLDLDMN 250

Query: 288 TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAA 347
                   S   T  +     +    ALP ++PP  +     GL    E+++ ++LA+++
Sbjct: 251 I------YSRQYTEAM---VPSSDMMALPSMLPPEAAHFPEGGLLIEEEKTLAMDLAVSS 301

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP---NGFVTEASRETGM 404
           + ELVKM +  EPLW+R  E SG++VLN EE+ R F   + LK    N F TEA+R++ +
Sbjct: 302 IAELVKMCRLTEPLWVRDNE-SGKEVLNVEEHGRMFPWPLNLKQHLINEFRTEATRDSAV 360

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           VI+NS+ LV+  +D N+W E+FP ++A+  T  VISS + G  + +LQLM+AELQ LSPL
Sbjct: 361 VIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASSSLQLMYAELQTLSPL 420

Query: 465 VPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
           VP RE +FLR C+Q+A EG W VVD  ID+  + S   +F   RR PSGC++QDMPNGYS
Sbjct: 421 VPTREAHFLRCCQQNADEGSWTVVDFPIDSFHD-SLQHSFPRYRRKPSGCIIQDMPNGYS 479

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +VTWVEHAE +E  +HQ++   + SGM FGA RW+A LQRQCE +A LM+ ++S
Sbjct: 480 RVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIASLMARNIS 533


>gi|224118060|ref|XP_002317722.1| predicted protein [Populus trichocarpa]
 gi|222858395|gb|EEE95942.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/457 (49%), Positives = 304/457 (66%), Gaps = 25/457 (5%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQ+LES+FKE PHPDEKQRL+LS+ L L  RQ+KFWFQNRRTQMK Q 
Sbjct: 26  RKKRYHRHTAHQIQKLESMFKEFPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQH 85

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +NS LR ENDK+R EN++IR+A++N IC +CG P +  D   +EQ LRIENA+LK+E
Sbjct: 86  ERADNSSLRAENDKIRCENIAIREALKNVICPSCGAPPVTEDSYFDEQKLRIENAQLKEE 145

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           LDRV ++A K++GRP+S + P  P+  SSL+L +G                PA       
Sbjct: 146 LDRVSSIAAKYIGRPISQLPPVQPVHISSLDLSMGN-------FGGQGLGGPALDLDLDL 198

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQ 372
           + +P         PG++ +D    +S+  ++A  AM+EL+++ Q +E LW++S    GR 
Sbjct: 199 DLIPTNSNLAFQPPGISDMD----KSLMTDVATNAMEELLRLLQANESLWMKS-STDGRD 253

Query: 373 VLNHEEYLRTFTPCIG-LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           VLN + Y R F   +  LK      E+SR++G+VI+N +ALV+  MD N+W E FP +++
Sbjct: 254 VLNLDSYQRIFPRAMSHLKNPNVRIESSRDSGVVIMNGVALVDMFMDSNKWVESFPTIVS 313

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
              T +VISSGM G  +G+LQLM+ ELQVLSPLVP RE   LR+C+Q  +G+WA+V VS 
Sbjct: 314 VAKTIEVISSGMLGNHSGSLQLMYEELQVLSPLVPTREFCILRYCQQIEQGLWAIVSVSY 373

Query: 492 DTIRETSGAPAFVN---CRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLII 547
           D        P F +   C RLPSGC++QDMPNGYSKV WVEH E  D++  HQLY+ LI 
Sbjct: 374 DI-------PQFASQFQCHRLPSGCLIQDMPNGYSKVIWVEHVEIEDKAPTHQLYRDLIH 426

Query: 548 SGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           SG+ FGA+RW+ATLQR CE +A  M +  S RD  G+
Sbjct: 427 SGLAFGAERWLATLQRMCERVACQMVSGSSTRDLGGV 463


>gi|345195182|tpg|DAA34956.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413917511|gb|AFW57443.1| putative homeobox/lipid-binding domain family protein isoform 1
           [Zea mays]
 gi|413917512|gb|AFW57444.1| putative homeobox/lipid-binding domain family protein isoform 2
           [Zea mays]
          Length = 769

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/504 (48%), Positives = 322/504 (63%), Gaps = 58/504 (11%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASG------DDLDAAD----NPPRKKRYHRHTPQQIQE 148
            R  R D L  ES+SGSDNM+G +       ++L   D     P RKKRYHRHT  QIQE
Sbjct: 34  ARGPRHDELLMESKSGSDNMEGGARSGGSGGEELQEEDLGLRQPARKKRYHRHTQHQIQE 93

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           LE+ FKE PHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ ERHEN  LR EN+KL
Sbjct: 94  LEAFFKEYPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQQERHENMQLRAENEKL 153

Query: 209 RAENMSIRDAMRNPICTNCGGP---AIIGDISLEEQHLRIENARLKDELDRVCALAGKFL 265
           RAEN   +DA+ N  C +CGGP   A+IG++S +E HLR+ENARL+DE+DR+  +A K++
Sbjct: 154 RAENARYKDALANASCPSCGGPAATAVIGEMSFDEHHLRVENARLRDEVDRISTIAAKYV 213

Query: 266 GRPVSSMGPP-----------PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNA 314
           G+P  S+              P  +S   L  G  + FGGL                   
Sbjct: 214 GKPAGSLLLLPPNNLSNNVSGPALSSHHHLLPGGTDVFGGL------------------- 254

Query: 315 LPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF--EGSGRQ 372
                  +R   G  G D   ++ + +ELA+AAM+ELV+MA   EPLWI +   +G+  +
Sbjct: 255 -------HRHAGG--GFD--FDKGLVVELAVAAMEELVRMALLGEPLWIPALAVDGATTE 303

Query: 373 VLNHEEYLRTFTP-CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
            LN EEY R F P  +G K     +EASRE  +VI+N ++L+E LMD N+W+ +F  +++
Sbjct: 304 TLNEEEYARGFFPRGVGPKLPELRSEASREAVVVIMNHVSLIEMLMDVNQWSTLFSSIVS 363

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
           R AT +V+S+G+ G  NGALQLM AE Q+ SPLVP RE  FLR+CKQH +G WAVVDVS+
Sbjct: 364 RAATLEVLSTGVAGNYNGALQLMTAEFQMPSPLVPTRECQFLRYCKQHTDGSWAVVDVSV 423

Query: 492 D-TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           +  +  T         RR PSGC++Q+MPNGYS+VTWVEHAE D+  VH LY+PL+ SG+
Sbjct: 424 EGQLLRTGSRQGRGRGRRRPSGCLIQEMPNGYSRVTWVEHAEADDMMVHDLYRPLVCSGL 483

Query: 551 GFGAQRWVATLQRQCECLAILMST 574
            FGA+RW +TL+RQCE LA  M++
Sbjct: 484 AFGARRWASTLERQCERLASAMAS 507


>gi|255574032|ref|XP_002527933.1| homeobox protein, putative [Ricinus communis]
 gi|223532666|gb|EEF34449.1| homeobox protein, putative [Ricinus communis]
          Length = 713

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/465 (49%), Positives = 315/465 (67%), Gaps = 25/465 (5%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D D +D   RKKRYHRHT  Q+Q+LES+FKECPHPDEKQRL+LS+ L L  RQ+KFWFQN
Sbjct: 23  DHDPSDLQRRKKRYHRHTANQVQKLESMFKECPHPDEKQRLQLSRELGLTQRQIKFWFQN 82

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           RRTQMK Q ER +N  LR ENDK+R EN++IR+A++N IC +CGGP +  D   +E  LR
Sbjct: 83  RRTQMKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPVTEDSYFDEHKLR 142

Query: 245 IENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTL 303
           +EN++LK+ELDRV ++A K++GRP+S + P  P+  SSL+L +G+  G G    ++   L
Sbjct: 143 MENSQLKEELDRVSSIAAKYIGRPISHLPPVQPIHISSLDLSMGSFGGQGIGGPSLDLDL 202

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 363
                T      P+         G++ +D    +S+  ++A  AMDEL+++ QT+EPLW+
Sbjct: 203 DLIPSTSTLPFHPL---------GISDMD----KSLMSDIAANAMDELLRLLQTNEPLWM 249

Query: 364 RSFEGSGRQVLNHEEYLRTF-TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
           +S     R VL+ + Y   F  P   LK      EASR++G+VI+NSLALV+  MD N+W
Sbjct: 250 KS-STDYRDVLHLDTYQSIFPRPISRLKNPNVRIEASRDSGVVIMNSLALVDMFMDANKW 308

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
            E+FP +++ +   +VISSGM G+ +G+L LM+ ELQVLSPLVP RE   LR+C+Q  +G
Sbjct: 309 VELFPTIVSISKPLEVISSGMMGSHSGSLHLMYEELQVLSPLVPTREFYILRYCQQIEQG 368

Query: 483 VWAVVDVSIDTIRETSGAPAFVNCR--RLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVH 539
           +WA+V+VS D  + +S       CR  RLPSGC++QDMPNGYSKVTWVEH E  D++  H
Sbjct: 369 LWAIVNVSYDIQQFSS------QCRSHRLPSGCLIQDMPNGYSKVTWVEHVEVEDKNPTH 422

Query: 540 QLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           +LY+ LI SGM FGA+RW+ATLQR CE  A LM +    RD  G+
Sbjct: 423 RLYRDLIHSGMAFGAERWLATLQRMCERFACLMVSGNLTRDLGGV 467


>gi|242095072|ref|XP_002438026.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
 gi|241916249|gb|EER89393.1| hypothetical protein SORBIDRAFT_10g006820 [Sorghum bicolor]
          Length = 700

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/470 (46%), Positives = 315/470 (67%), Gaps = 26/470 (5%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  ++KRYHRHTP+QIQ+LE++FKECPHPDE QR  LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN+++R+A++N IC NCGGP +  D   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPNCGGPPVAEDF-FDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTING----FGGLSS 297
           LR+ENARLK+ELDRV ++  K+LGRP + M P P M  SSL+L +G + G     GG  S
Sbjct: 123 LRMENARLKEELDRVSSITSKYLGRPFTQMPPVPTMSMSSLDLSMGGMPGQQGHLGGPPS 182

Query: 298 TVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQT 357
                L  D  +G S+ +P  MP   +          +ER M +++A  AMDEL+++AQ 
Sbjct: 183 -----LDLDLLSGCSSGMPYQMPAPVT---------EMERPMMVDMATRAMDELIRLAQA 228

Query: 358 DEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVETL 416
            + +W++   G  R++LN   Y   F+ P +  +P     E SR++G+V ++++ALV+  
Sbjct: 229 GDQIWVKGMPGDAREMLNVATYDSLFSKPGVAFRPPDMNVEGSRDSGLVFMSAVALVDVF 288

Query: 417 MDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFC 476
           MD N+W E FP ++++  T DV+ +G+GG R+ +L +M+ EL +++P+VP RE++FLR+C
Sbjct: 289 MDTNKWMEFFPGIVSKAQTVDVLVNGLGG-RSESLIMMYEELHIMTPVVPTRELSFLRYC 347

Query: 477 KQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           KQ  +G+WA+ DVS+D  R+   G P+    RR+PSGC++ DM NGYSKVTWVEH E ++
Sbjct: 348 KQIEQGLWAIADVSLDGQRDAHYGMPS--RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQ 405

Query: 536 S-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
              ++ LY+ L++SG  FGA RW+A LQR CE  A + +  V   D  G+
Sbjct: 406 MLPINVLYRNLVLSGAAFGAHRWLAALQRACERFASVATLGVPHHDIAGV 455


>gi|345195198|tpg|DAA34964.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 687

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/466 (46%), Positives = 313/466 (67%), Gaps = 23/466 (4%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  ++KRYHRHTP+QIQ+LE++FKECPHPDE QR  LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN+++R+A++N IC +CGGP +  D   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVDEDF-FDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTT 301
           LR+ENARLK+ELDRV ++  K+LGRP + M P P M  SSL+L VG +   GG S     
Sbjct: 123 LRMENARLKEELDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMGSLGGPS----- 177

Query: 302 TLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPL 361
            L  D  +G S+ LP  +P   +          +ER M +++A  AMDEL+++AQ  E +
Sbjct: 178 -LDLDLLSGCSSGLPYQVPAPVT---------EMERPMMVDMAARAMDELIRLAQAGEQI 227

Query: 362 WIRSFEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPN 420
           W++   G  R+VL+   Y   F  P    +P     EASR++G+V ++++ALV+  MD N
Sbjct: 228 WVKGVPGDAREVLDVGTYDSLFAKPGAAFRPPDINVEASRDSGLVFMSAVALVDVFMDTN 287

Query: 421 RWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHA 480
           +W E FP ++++  T DV+ +G+GG R+ +L +M+ EL +++P+VP RE++FLR+CKQ  
Sbjct: 288 KWMEFFPGIVSKAQTVDVLVNGLGG-RSESLIMMYEELHIMTPVVPTRELSFLRYCKQIE 346

Query: 481 EGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QV 538
           +G+WAV DVS++  R+   G P+    RR+PSGC++ DM NGYSKVTWVEH E ++   +
Sbjct: 347 QGLWAVADVSLEGQRDAHYGVPS--RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPI 404

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           + LY+ L++SG  FGA RW+A LQR CE  A + +  V   D  G+
Sbjct: 405 NVLYRNLVLSGAAFGAHRWLAALQRACERFASVATLGVPHHDVAGV 450


>gi|357166100|ref|XP_003580598.1| PREDICTED: homeobox-leucine zipper protein ROC2-like [Brachypodium
           distachyon]
          Length = 787

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/494 (46%), Positives = 314/494 (63%), Gaps = 41/494 (8%)

Query: 97  IIGRRSREDLLEHESRSGSDNMDGASGDD-----LDAADNPPRKKRYHRHTPQQIQELES 151
           ++ RRS     + ESRSGS+N+DG   +D      D    P ++ RYHRHT  QIQE+E+
Sbjct: 70  MVRRRSEPLGEDFESRSGSENVDGDGVEDELQQQADPNKRPRKQNRYHRHTQHQIQEMEA 129

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAE 211
            +KEC HPD+KQR ELS+ L LE  QVKFWFQN+RTQ K Q ERHENS LR ENDKLRAE
Sbjct: 130 FYKECQHPDDKQRKELSRELGLEPLQVKFWFQNKRTQTKNQQERHENSQLRGENDKLRAE 189

Query: 212 NMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS 271
           NM  ++A+ +  C +CGGPA +G++S +E HLR+ENARL+DE+DR+ A+A K++G+P   
Sbjct: 190 NMRYKEALSSASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGKPA-- 247

Query: 272 MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
                +P   L   +  +  +G              G  +   L   M P       TG 
Sbjct: 248 -----VPFPVLSNPLAAVGAYGH----------HHLGADMFGELQQPMRP-------TGG 285

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF----TPCI 387
                + + +ELA+AAM+EL++M + +EPLW         + LN EEY R F       +
Sbjct: 286 AGDQNKGVVVELAVAAMEELLRMTRLNEPLWAGPGVAGPMETLNEEEYARMFGGPRGGGL 345

Query: 388 GLKPNG-FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
           G K  G  V+EASRE+ +VI+    LVE LMD N++A +F  +++R AT +V+S+G+ G 
Sbjct: 346 GPKQYGQLVSEASRESAVVILTPANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGC 405

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
            +GALQ+M  E QV SPLVP RE  F+R+CKQ+++G WAVVDVS+DT++        + C
Sbjct: 406 YDGALQVMSVEFQVPSPLVPTRESYFVRYCKQNSDGTWAVVDVSLDTLQG-------IKC 458

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RR PSGC++Q+ PNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV  L RQCE
Sbjct: 459 RRRPSGCLIQEAPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGALGRQCE 518

Query: 567 CLAILMSTSVSARD 580
            LA +M++++   D
Sbjct: 519 RLASVMASNIPNSD 532


>gi|187611421|sp|Q69T58.2|ROC8_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC8; AltName:
           Full=GLABRA 2-like homeobox protein 8; AltName:
           Full=HD-ZIP protein ROC8; AltName: Full=Homeodomain
           transcription factor ROC8; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 8
          Length = 710

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 31/464 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  R+KRYHRHTP+QIQ+LE++FKECPHPDE QR +LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRRRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN++IR+A++N IC  CGGP  +G+   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPP-VGEDYFDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLSSTVT 300
           LR+ENARLK+ELDRV  L  K+LGRP + + P  PPM  SSL+L VG   G GG S    
Sbjct: 123 LRMENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVG---GMGGPS---- 175

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             L  D  +G S+ +P  +P   S          +ER M  E+A  AMDEL+++AQ  + 
Sbjct: 176 --LDLDLLSGGSSGIPFQLPAPVS---------DMERPMMAEMATRAMDELIRLAQAGDH 224

Query: 361 LWIRS-----FEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           +W +S       G  R+ LN + Y   F+ P    +      E SRE+G+V+++++AL +
Sbjct: 225 IWSKSPGGGVSGGDARETLNVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALAD 284

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
             MD N+W E FP ++++  T DV+ +GMGG R+ +L LM+ EL +++P VP REVNF+R
Sbjct: 285 VFMDTNKWMEFFPSIVSKAHTIDVLVNGMGG-RSESLILMYEELHIMTPAVPTREVNFVR 343

Query: 475 FCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           +C+Q  +G+WA+ DVS+D  R+   GAP     RRLPSGC++ DM NGYSKVTWVEH E 
Sbjct: 344 YCRQIEQGLWAIADVSVDLQRDAHFGAPP-PRSRRLPSGCLIADMANGYSKVTWVEHMEV 402

Query: 534 DE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           +E S ++ LY+ L++SG  FGA RW+A LQR CE  A L++  V
Sbjct: 403 EEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGV 446


>gi|222635166|gb|EEE65298.1| hypothetical protein OsJ_20535 [Oryza sativa Japonica Group]
          Length = 575

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 31/464 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  R+KRYHRHTP+QIQ+LE++FKECPHPDE QR +LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRRRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN++IR+A++N IC  CGGP  +G+   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPP-VGEDYFDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLSSTVT 300
           LR+ENARLK+ELDRV  L  K+LGRP + + P  PPM  SSL+L VG   G GG S    
Sbjct: 123 LRMENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVG---GMGGPS---- 175

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             L  D  +G S+ +P  +P   S          +ER M  E+A  AMDEL+++AQ  + 
Sbjct: 176 --LDLDLLSGGSSGIPFQLPAPVS---------DMERPMMAEMATRAMDELIRLAQAGDH 224

Query: 361 LWIRS-----FEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           +W +S       G  R+ LN + Y   F+ P    +      E SRE+G+V+++++AL +
Sbjct: 225 IWSKSPGGGVSGGDARETLNVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALAD 284

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
             MD N+W E FP ++++  T DV+ +GMGG R+ +L LM+ EL +++P VP REVNF+R
Sbjct: 285 VFMDTNKWMEFFPSIVSKAHTIDVLVNGMGG-RSESLILMYEELHIMTPAVPTREVNFVR 343

Query: 475 FCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           +C+Q  +G+WA+ DVS+D  R+   GAP     RRLPSGC++ DM NGYSKVTWVEH E 
Sbjct: 344 YCRQIEQGLWAIADVSVDLQRDAHFGAPP-PRSRRLPSGCLIADMANGYSKVTWVEHMEV 402

Query: 534 DE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           +E S ++ LY+ L++SG  FGA RW+A LQR CE  A L++  V
Sbjct: 403 EEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGV 446


>gi|51091201|dbj|BAD35894.1| putative homeobox [Oryza sativa Japonica Group]
          Length = 734

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 31/464 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  R+KRYHRHTP+QIQ+LE++FKECPHPDE QR +LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRRRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN++IR+A++N IC  CGGP  +G+   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPP-VGEDYFDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLSSTVT 300
           LR+ENARLK+ELDRV  L  K+LGRP + + P  PPM  SSL+L VG   G GG S    
Sbjct: 123 LRMENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVG---GMGGPS---- 175

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             L  D  +G S+ +P  +P   S          +ER M  E+A  AMDEL+++AQ  + 
Sbjct: 176 --LDLDLLSGGSSGIPFQLPAPVS---------DMERPMMAEMATRAMDELIRLAQAGDH 224

Query: 361 LWIRS-----FEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           +W +S       G  R+ LN + Y   F+ P    +      E SRE+G+V+++++AL +
Sbjct: 225 IWSKSPGGGVSGGDARETLNVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALAD 284

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
             MD N+W E FP ++++  T DV+ +GMGG R+ +L LM+ EL +++P VP REVNF+R
Sbjct: 285 VFMDTNKWMEFFPSIVSKAHTIDVLVNGMGG-RSESLILMYEELHIMTPAVPTREVNFVR 343

Query: 475 FCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           +C+Q  +G+WA+ DVS+D  R+   GAP     RRLPSGC++ DM NGYSKVTWVEH E 
Sbjct: 344 YCRQIEQGLWAIADVSVDLQRDAHFGAPP-PRSRRLPSGCLIADMANGYSKVTWVEHMEV 402

Query: 534 DE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           +E S ++ LY+ L++SG  FGA RW+A LQR CE  A L++  V
Sbjct: 403 EEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGV 446


>gi|218197780|gb|EEC80207.1| hypothetical protein OsI_22100 [Oryza sativa Indica Group]
          Length = 613

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/464 (48%), Positives = 310/464 (66%), Gaps = 31/464 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  R+KRYHRHTP+QIQ+LE++FKECPHPDE QR +LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRRRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN++IR+A++N IC  CGGP  +G+   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPP-VGEDYFDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLSSTVT 300
           LR+ENARLK+ELDRV  L  K+LGRP + + P  PPM  SSL+L VG   G GG S    
Sbjct: 123 LRMENARLKEELDRVSNLTSKYLGRPFTQLPPATPPMTVSSLDLSVG---GMGGPS---- 175

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             L  D  +G S+ +P  +P   S          +ER M  E+A  AMDEL+++AQ  + 
Sbjct: 176 --LDLDLLSGGSSGIPFQLPAPVS---------DMERPMMAEMATRAMDELIRLAQAGDH 224

Query: 361 LWIRS-----FEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           +W +S       G  R+ LN + Y   F+ P    +      E SRE+G+V+++++AL +
Sbjct: 225 IWSKSPGGGVSGGDARETLNVDTYDSIFSKPGGSYRAPSINVEGSRESGLVLMSAVALAD 284

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
             MD N+W E FP ++++  T DV+ +GMGG R+ +L LM+ EL +++P VP REVNF+R
Sbjct: 285 VFMDTNKWMEFFPSIVSKAHTIDVLVNGMGG-RSESLILMYEELHIMTPAVPTREVNFVR 343

Query: 475 FCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           +C+Q  +G+WA+ DVS+D  R+   GAP     RRLPSGC++ DM NGYSKVTWVEH E 
Sbjct: 344 YCRQIEQGLWAIADVSVDLQRDAHFGAPP-PRSRRLPSGCLIADMANGYSKVTWVEHMEV 402

Query: 534 DE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           +E S ++ LY+ L++SG  FGA RW+A LQR CE  A L++  V
Sbjct: 403 EEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGV 446


>gi|302807022|ref|XP_002985242.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
 gi|300147070|gb|EFJ13736.1| hypothetical protein SELMODRAFT_234698 [Selaginella moellendorffii]
          Length = 695

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/473 (48%), Positives = 314/473 (66%), Gaps = 32/473 (6%)

Query: 118 MDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           M+GASGDD  D +D    KKRYHRHT QQ ++LE  FKECPHPDEKQR EL + L LE R
Sbjct: 1   MEGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGRELGLEPR 60

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QVKFWFQNRRTQMK   ER +NS+LR EN+ LR EN+++R+A+++  C  CGG    G++
Sbjct: 61  QVKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEM 120

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
           S  EQ LRIENARL+DEL+RV AL  K++ R  S++    +P+   +             
Sbjct: 121 SFTEQQLRIENARLRDELNRVSALVAKYITR--SAIPLNILPDFPFD------------- 165

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM-A 355
             +T T     GT  S A+P ++       GVT      E+ +  ELA+ AM+EL+ + A
Sbjct: 166 --ITAT-----GTSDSVAVPSILEVASRPGGVT----ESEKPVIAELAIVAMEELLLVAA 214

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           +TD  LW  S +G+ ++VL+ EEY R F   +G +  G  TEASRETG+V++N+  L++T
Sbjct: 215 ETDGALW-SSVDGT-KEVLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDT 272

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           +M+  RW +MF  +++R  TT V+++G+GG  N ALQL++AELQ+LSPLVP RE  FLR+
Sbjct: 273 IMNVGRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRY 332

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           CKQH+E VWA+VDVSID +R+   AP  + CR  PSG  ++D+ NGYSKVT V+H E D 
Sbjct: 333 CKQHSERVWAIVDVSIDGLRDNP-APQ-LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADH 390

Query: 536 SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYDIN 588
            Q   +Y  L+ SG  FGA+RW+A LQRQCE L I+++ ++SARD   I + N
Sbjct: 391 RQTENIYHGLMCSGAAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNAN 443


>gi|224138204|ref|XP_002326544.1| predicted protein [Populus trichocarpa]
 gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/473 (47%), Positives = 317/473 (67%), Gaps = 41/473 (8%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES SG + ++  SG++ ++++ PP+KKRYHRHT +QIQE+E++FKECPHPD+KQR+ L
Sbjct: 6   EVESGSGCEQLEEKSGNEEESSEQPPKKKRYHRHTARQIQEMEAMFKECPHPDDKQRMRL 65

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
           S  L L+ RQVKFWFQNRRTQMK Q +R +N++LR EN+ L+ +N  ++  +RN IC +C
Sbjct: 66  SHELGLKPRQVKFWFQNRRTQMKAQQDRSDNNILRAENESLQNDNYRLQAELRNLICPDC 125

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVG 287
           GG A++G+I  E+  LR+E+ARL++EL+RVC +A ++ GRP+ SM           LG  
Sbjct: 126 GGQAMLGEIPFED--LRLEHARLREELERVCCIASRYGGRPIHSMS----------LGT- 172

Query: 288 TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAA 347
            I+          ++ P     GI     V+M     G G+            + LAL++
Sbjct: 173 CIDMMPMPMLPEPSSFPE---AGI-----VLM---EEGEGLA-----------MGLALSS 210

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG--FVTEASRETGMV 405
           MDELVKM   +EPLWI + E +G++VLN EE+ R F     LK N     TEA+R+  +V
Sbjct: 211 MDELVKMCNANEPLWITNNE-NGKEVLNLEEHARMFPWPSNLKQNSSDMRTEATRDCAVV 269

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
           I+NS+ LV+  +D N+W E+FP ++AR  T  VI +G+ G  +G+L LM+AELQVLSPLV
Sbjct: 270 IMNSINLVDAFLDANKWMELFPSIVARAKTVQVIKTGVCGA-SGSLHLMYAELQVLSPLV 328

Query: 466 PVREVNFLRFCKQHAE-GVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           P RE +FLRFC+Q+ E G WA+VD  +D+  +    P+F   RR PSGCV+QD+PNGYSK
Sbjct: 329 PTRETHFLRFCQQNVEEGTWAIVDFPLDSFHDNI-RPSFPLYRRRPSGCVIQDLPNGYSK 387

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +TW+EHAE ++  VHQ++   I SGM FGA RW+A LQRQCE +A LM+ ++S
Sbjct: 388 LTWIEHAEIEDKPVHQIFSQYIYSGMAFGAHRWLAVLQRQCERVASLMARNIS 440


>gi|449530169|ref|XP_004172068.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like, partial [Cucumis sativus]
          Length = 468

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 217/427 (50%), Positives = 291/427 (68%), Gaps = 29/427 (6%)

Query: 101 RSREDLLEHESRSGSDN-MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHP 159
           R R+D  +  ++SGSDN  +  SGDD D     P+KKRYHRHT  QIQE+E+ FKECPHP
Sbjct: 68  RIRDDDFDSATKSGSDNNHELVSGDDQDPR---PKKKRYHRHTQHQIQEMEAFFKECPHP 124

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAM 219
           D+KQR ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR EN+KLRA+NM  R+A+
Sbjct: 125 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENTQLRTENEKLRADNMRYREAL 184

Query: 220 RNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS--MGPPPM 277
            N  C NCGGP  IG++S +E HLR+ENARL++E+DR+ A+A K++G+PV +  +  P +
Sbjct: 185 SNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPSV 244

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
           P+  LELG+       GL          D     S+ +  +  P  +           ++
Sbjct: 245 PSRPLELGMANFGPQPGLGG-------GDIYGSASDLIRSISAPTEA-----------DK 286

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTE 397
            M +ELA+AAM+EL +MAQ  EPLW+ + +GS   +LN +EYLRTF   IG KP+GF  E
Sbjct: 287 PMIIELAVAAMEELTRMAQMGEPLWMTTLDGS-THMLNEDEYLRTFPRGIGPKPSGFKCE 345

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASRE+ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M +E
Sbjct: 346 ASRESAVVIMNHINLVEILMDVNQWSTLFSGIVSRAMTLEVLSTGVAGNYNGALQVMTSE 405

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQD 517
            QV SPLVP RE  ++R+CKQH +G W VVDVS+D +R T G    V CRR PSGC++Q+
Sbjct: 406 FQVPSPLVPTRESYYVRYCKQHGDGTWVVVDVSLDDLRPTPG----VRCRRRPSGCLIQE 461

Query: 518 MPNGYSK 524
           MPNGYSK
Sbjct: 462 MPNGYSK 468


>gi|302773265|ref|XP_002970050.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
 gi|300162561|gb|EFJ29174.1| hypothetical protein SELMODRAFT_450564 [Selaginella moellendorffii]
          Length = 683

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/473 (48%), Positives = 315/473 (66%), Gaps = 33/473 (6%)

Query: 118 MDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           M+GASGDD  D +D    KKRYHRHT QQ ++LE +FKECPHPDEKQR EL + L LE R
Sbjct: 1   MEGASGDDFEDQSDLQASKKRYHRHTVQQTRQLE-MFKECPHPDEKQRQELGRELGLEPR 59

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QVKFWFQNRRTQMK   ER +NS+LR EN+ LR EN+++R+A+++  C  CGG    G++
Sbjct: 60  QVKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEM 119

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
           S  EQ LRIENARL+DEL+RV AL  K++ R  S++    +P+   +             
Sbjct: 120 SFTEQQLRIENARLRDELNRVSALVAKYITR--SAIPLNILPDFPFD------------- 164

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM-A 355
             +T T     GT  S A+P ++       GVT      E+ +  ELA+ AM+EL+ + A
Sbjct: 165 --ITAT-----GTSDSVAVPSILEMASRPGGVT----ESEKPVIAELAIVAMEELLLVAA 213

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           +TD  LW  S +G+ ++VL+ EEY R F   +G +  G  TEASRETG+V++N+  L++T
Sbjct: 214 ETDGALW-SSVDGT-KEVLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDT 271

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           +M+  RW +MF  +++R  TT V+++G+GG  N ALQL++AELQ+LSPLVP RE  FLR+
Sbjct: 272 IMNVGRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRY 331

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           CKQH+E VWA+VDVSID +R+   AP  + CR  PSG  ++D+ NGYSKVT V+H E D 
Sbjct: 332 CKQHSERVWAIVDVSIDGLRDNP-APQ-LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADH 389

Query: 536 SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYDIN 588
            Q   +Y  L+ SG  FGA+RW+A LQRQCE L I+++ ++SARD   I + N
Sbjct: 390 RQTENIYHGLVCSGAAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNAN 442


>gi|109729916|tpg|DAA05772.1| TPA_inf: class IV HD-Zip protein HDZ42 [Selaginella moellendorffii]
          Length = 694

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/473 (48%), Positives = 314/473 (66%), Gaps = 33/473 (6%)

Query: 118 MDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           M+GASGDD  D +D    KKRYHRHT QQ ++LE  FKECPHPDEKQR EL + L LE R
Sbjct: 1   MEGASGDDFEDQSDLQASKKRYHRHTVQQTRQLEMFFKECPHPDEKQRQELGRELGLEPR 60

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QVKFWFQNRRTQMK   ER +NS+LR EN+ LR EN+++R+A+++  C  CGG    G++
Sbjct: 61  QVKFWFQNRRTQMKAHHERADNSILRAENENLRTENIALREALKDASCPKCGGQLTPGEM 120

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
           S  EQ LRIENARL+DEL+RV AL  K++ R  S++    +P+   +             
Sbjct: 121 SFTEQQLRIENARLRDELNRVSALVAKYITR--SAIPLNILPDFPFD------------- 165

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM-A 355
             +T T     GT  S A+P ++       GVT      E+ +  ELA+ AM+EL+ + A
Sbjct: 166 --ITAT-----GTSDSVAVPSILEMASRPGGVT----ESEKPVIAELAIVAMEELLLVAA 214

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           +TD  LW  S +G+ ++VL+ EEY R F   +G +  G  TEASRETG+V++N+  L++T
Sbjct: 215 ETDGALW-SSVDGT-KEVLSQEEYFRQFPRGLGPRLMGMETEASRETGLVMMNAAGLIDT 272

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           +M+  RW +MF  +++R  TT V+++G+GG  N ALQL++AELQ+LSPLVP RE  FLR+
Sbjct: 273 IMN-GRWVDMFSNIVSRAFTTQVLTTGVGGNWNNALQLLYAELQILSPLVPTREFFFLRY 331

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE 535
           CKQH+E VWA+VDVSID +R+   AP  + CR  PSG  ++D+ NGYSKVT V+H E D 
Sbjct: 332 CKQHSERVWAIVDVSIDGLRDNP-APQ-LRCRMRPSGFFIEDLQNGYSKVTAVQHIEADH 389

Query: 536 SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYDIN 588
            Q   +Y  L+ SG  FGA+RW+A LQRQCE L I+++ ++SARD   I + N
Sbjct: 390 RQTENIYHGLVCSGAAFGAKRWLAILQRQCERLGIMLTNNISARDLGVIPNAN 442


>gi|345195202|tpg|DAA34966.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 699

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/466 (46%), Positives = 308/466 (66%), Gaps = 21/466 (4%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+ + +D+  ++KRYHRHTP+QIQ+LE++FKECPHPDE QR  LS+ L LE RQ+KFWF
Sbjct: 4   GDEPEGSDSQRQRKRYHRHTPRQIQQLEAMFKECPHPDENQRAALSRELGLEPRQIKFWF 63

Query: 183 QNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQH 242
           QNRRTQMK Q ER +N  LR ENDK+R EN+++R+A++N IC +CGGP +  D   +EQ 
Sbjct: 64  QNRRTQMKAQHERADNCFLRAENDKIRCENITMREALKNVICPSCGGPPVAEDF-FDEQK 122

Query: 243 LRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTT 301
           LR+ENARLK+ELDRV ++  K+LGRP + M P P M  SSL+L VG +            
Sbjct: 123 LRMENARLKEELDRVSSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMP----GQGLGGP 178

Query: 302 TLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPL 361
           +L  D  +G S+ LP  MP   +          +ER M +++A  AMDEL+++AQ  E +
Sbjct: 179 SLDLDLLSGCSSGLPYHMPAPVT---------EMERPMMVDMATRAMDELIRLAQAGEQI 229

Query: 362 WIRSFEGSGRQVLNHEEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPN 420
           W++   G  R+VL+   Y   F  P    +P     E SR++G+V ++++ALV+  MD N
Sbjct: 230 WVQGMPGDAREVLDVATYDSLFAKPGGAFRPPEINVEGSRDSGLVFMSAVALVDVFMDTN 289

Query: 421 RWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHA 480
           +W E FP ++++  T DV+ +G+ G R+ +L +M+ EL +++P+VP RE++FLR+CKQ  
Sbjct: 290 KWMEFFPGIVSKAQTVDVLVNGLCG-RSESLIMMYEELHIMTPVVPTRELSFLRYCKQIE 348

Query: 481 EGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QV 538
           +G+WAV DVS+D  R+   G P+    RR+PSGC++ DM NGYSKVTWVEH E +    +
Sbjct: 349 QGLWAVADVSLDGQRDAHYGVPS--RSRRMPSGCLIADMSNGYSKVTWVEHLEIEHMLPI 406

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           + LY+ L++SG  FGA RW+A LQR CE  A L +  V   D  G+
Sbjct: 407 NVLYRNLVLSGAAFGAHRWLAALQRACERFASLATLGVPHHDVAGV 452


>gi|164708731|gb|ABY67263.1| homeodomain protein HOX2 [Gossypium arboreum]
          Length = 737

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/470 (46%), Positives = 310/470 (65%), Gaps = 31/470 (6%)

Query: 114 GSDNMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           G + M   S  +L +  + P +KKRYHRHT  QIQELE++FKECPHPD+KQR++LS+ L 
Sbjct: 66  GKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQELG 125

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           L+ RQVKFWFQNRRTQMK Q +R EN +LR END L++E   ++  +   +C NCGGP +
Sbjct: 126 LKPRQVKFWFQNRRTQMKAQQDRSENVILRAENDSLKSEFYRLQAELSKLVCPNCGGPPV 185

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
            G +S +E  LRIENARL +EL+RVCA+A +++GRP+ +MG    P+  L++ +      
Sbjct: 186 PGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGALMPPSLELDMNI------ 237

Query: 293 GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD-RSIERSMFLELALAAMDEL 351
                      P  F   +    P ++    S P    L     E+++ +ELA++A DEL
Sbjct: 238 ----------YPRQF---LEPMPPPILSETPSYPDNNNLILMEEEKTIAMELAMSATDEL 284

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG--FVTEASRETGMVIINS 409
           VKM +T+EPLW+R+ E +G++VLN +E++R F   + LK     F TEASR++ +VI+NS
Sbjct: 285 VKMCRTNEPLWVRNDE-TGKEVLNLDEHIRMFHWPLNLKQRSSEFRTEASRDSSVVIMNS 343

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV+  +D N+W E+FP ++AR     V+S G+ GT NG LQLM+AEL VLSPLVP RE
Sbjct: 344 ITLVDAFVDANKWMELFPSLVARAKCVQVLSQGVSGT-NGCLQLMYAELHVLSPLVPTRE 402

Query: 470 VNFLRFCKQH---AEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVT 526
             FLR+C+Q     E  WA+VD  +D     S   +F   +R PSGC++QDMPNGYS+VT
Sbjct: 403 AYFLRYCQQQNVEDETYWAIVDFPLDGFH-NSLQTSFPLYKRRPSGCLIQDMPNGYSRVT 461

Query: 527 WVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           WVEH+E +E  +HQ++   + SGM FGA  W+A L+RQCE +A LM+T++
Sbjct: 462 WVEHSEIEEKPIHQIFSHFVHSGMAFGANCWLAVLERQCERIASLMATNI 511


>gi|22475197|gb|AAM97322.1| homeodomain protein GhHOX2 [Gossypium hirsutum]
          Length = 775

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/472 (46%), Positives = 311/472 (65%), Gaps = 29/472 (6%)

Query: 111 SRSGSDNMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           S  G + M   S  +L +  + P +KKRYHRHT  QIQELE++FKECPHPD+KQR++LS+
Sbjct: 63  SLRGKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQ 122

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L L+ RQVKFWFQNRRTQMK Q +R EN +LR END L++E   ++  +   +C NCGG
Sbjct: 123 ELGLKPRQVKFWFQNRRTQMKAQQDRSENGILRAENDSLKSEFYRLQAELSKLVCPNCGG 182

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
           P + G +S +E  LRIENARL +EL+RVCA+A +++GRP+ +MG    P+  L++ +   
Sbjct: 183 PPVPGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGELMPPSLELDMNIYPR 240

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMD 349
                +   + +  P    + + N   ++M                E+++ +ELA++A D
Sbjct: 241 QFLEPMPPPILSETP----SYLDNNNLILMEE--------------EKTIAMELAMSATD 282

Query: 350 ELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG--FVTEASRETGMVII 407
           ELVKM +T+EPLW+R+   +G++VLN +E+ R F   + LK     F TEASR++ +VI+
Sbjct: 283 ELVKMCRTNEPLWVRN-NKTGKEVLNLDEHSRMFHWPLNLKQRSSEFRTEASRDSSVVIM 341

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           NS+ LV+  ++ ++W E+FP ++AR     VIS G+ GT NG LQLM+AEL VLSPLVP 
Sbjct: 342 NSITLVDAFVNAHKWMELFPSIVARAKCVQVISQGVSGT-NGCLQLMYAELHVLSPLVPT 400

Query: 468 REVNFLRFCKQHA---EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           RE  FLR+C+Q     E  WA+VD  +D     S   +F   +R PSGC++QDMPNGYS+
Sbjct: 401 REAYFLRYCQQQNVEDETYWAIVDFPLDGFH-NSLQTSFPLYKRRPSGCLIQDMPNGYSR 459

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           VTWVEHAE +E  +HQ++   + SGM FGA RW+A L+RQCE +A LM+T++
Sbjct: 460 VTWVEHAEIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERVASLMATNI 511


>gi|413939124|gb|AFW73675.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 701

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/486 (47%), Positives = 310/486 (63%), Gaps = 45/486 (9%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++++A+RN IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVA 116

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGF 292
            D   +EQ LR+ENARLK+ELDRV +L  K+LGRP++ +     +  SSL+L VG   G 
Sbjct: 117 DD-HFDEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPSAQALSMSSLDLSVG---GL 172

Query: 293 GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELV 352
           GG S      L  D  +G S+      PP    P        +ER M  E+A  AMDEL+
Sbjct: 173 GGPS------LDLDLLSGGSSGY----PPFHLLPMAVS---EMERPMMAEMATRAMDELI 219

Query: 353 KMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV------TEASRETGMVI 406
           +MAQ  E LW+++    GR+VLN + Y   F      KP+G         E SRETG+V 
Sbjct: 220 RMAQAGEHLWVKT---GGREVLNVDTYDSIFA-----KPDGSFRGPDVHVEGSRETGLVF 271

Query: 407 INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVP 466
           ++++ LV+  MD ++W E+FP ++++  T DV+ +GMGG R+ +L LM+ EL V+SP+VP
Sbjct: 272 MSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVNGMGG-RSESLLLMYEELHVMSPVVP 330

Query: 467 VREVNFLRFCKQHAEGVWAVVDVSIDTIRETS--GAPAFVNCRRLPSGCVVQDMPNGYSK 524
            RE  FLR+C+Q   G+WA+ D+S+D  +  +  GAP   +C RLPSGC++ DM +G SK
Sbjct: 331 TREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPSRSC-RLPSGCLIADMADGSSK 389

Query: 525 VTWVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV-SARDHT 582
           VTWVEH E  D   +H LY+ L++SG  FGA RW+A LQR CE  A L +  +   RD  
Sbjct: 390 VTWVEHMEIEDRVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCACLATAGIMPHRDIA 449

Query: 583 GIYDIN 588
              DI+
Sbjct: 450 AAGDIS 455


>gi|357139585|ref|XP_003571361.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Brachypodium
           distachyon]
          Length = 817

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 248/530 (46%), Positives = 318/530 (60%), Gaps = 89/530 (16%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNMDGASGDDLD---------AADN--PPRKKRYHRHTP 143
            GI GR S  D LE     GS+N+DG  G++ D         AAD   P +KKRYHRHT 
Sbjct: 79  HGIGGRNSNNDELEMSKSGGSNNLDGGGGEEEDQQEEEDEEPAADGKRPRKKKRYHRHTQ 138

Query: 144 QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQ 203
            QIQELE+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQ+KTQ ER EN+ LR 
Sbjct: 139 HQIQELEAFFKECPHPDDKQRKELSRMLNLEPLQVKFWFQNKRTQIKTQHERQENTALRT 198

Query: 204 ENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGK 263
           EN+KLRAENM  ++A+ N  C +CGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K
Sbjct: 199 ENEKLRAENMRYKEALANASCPSCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAK 258

Query: 264 FLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNR 323
           ++G                           G S+   ++LP           P   PP  
Sbjct: 259 YVGG-------------------------AGASAIKPSSLP-----------PAAYPPPV 282

Query: 324 SGPGVTG--------LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVL 374
               +TG            +++ M +ELA+AAM+EL++MA+  EPLW+ S   S G + L
Sbjct: 283 ESSHLTGSMIFSGGGHGGELDKPMVIELAVAAMEELIRMARLGEPLWVPSSSLSVGGETL 342

Query: 375 NHEEYLRTF-----------TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWA 423
             EEY R F            P     P    +EASRETG+VI++   LV  LMD ++W+
Sbjct: 343 VEEEYSRLFPGKHSSSSSSPAPAENHPPR---SEASRETGVVIMDQATLVSILMDVHQWS 399

Query: 424 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVN-FLRFCKQH--- 479
            +F  +++R AT +V+S+G+ G  +GALQLM AELQV SPLVP RE+  FLR+CK H   
Sbjct: 400 SVFSSIVSRAATLEVLSTGVAGNLDGALQLMSAELQVPSPLVPTRELPLFLRYCKHHPHG 459

Query: 480 --AEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY---- 533
               G WAVVDVS+D     S      N RR  SGCV+Q+MPNGYSKVTW+EH E     
Sbjct: 460 AGGAGTWAVVDVSLDNSGRNS------NIRRRASGCVIQEMPNGYSKVTWIEHTELPAAA 513

Query: 534 --DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA-ILMSTSVSARD 580
              +S VH+LYKPL+ SG  FGA+RWV+TL+RQCE LA   MS   S+ D
Sbjct: 514 SAADSMVHELYKPLVASGTAFGARRWVSTLKRQCERLASAAMSVHPSSAD 563


>gi|345195196|tpg|DAA34963.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 692

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/473 (47%), Positives = 305/473 (64%), Gaps = 44/473 (9%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++++A+RN IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVA 116

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGF 292
            D   +EQ LR+ENARLK+ELDRV +L  K+LGRP++ +     +  SSL+L VG   G 
Sbjct: 117 DD-HFDEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPSAQALSMSSLDLSVG---GL 172

Query: 293 GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELV 352
           GG S      L  D  +G S+      PP    P        +ER M  E+A  AMDEL+
Sbjct: 173 GGPS------LDLDLLSGGSSGY----PPFHLLPMAVS---EMERPMMAEMATRAMDELI 219

Query: 353 KMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV------TEASRETGMVI 406
           +MAQ  E LW+++    GR+VLN + Y   F      KP+G         E SRETG+V 
Sbjct: 220 RMAQAGEHLWVKT---GGREVLNVDTYDSIFA-----KPDGSFRGPDVHVEGSRETGLVF 271

Query: 407 INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVP 466
           ++++ LV+  MD ++W E+FP ++++  T DV+ +GMGG R+ +L LM+ EL V+SP+VP
Sbjct: 272 MSAIGLVDMFMDSSKWTELFPAIVSKARTVDVLVNGMGG-RSESLLLMYEELHVMSPVVP 330

Query: 467 VREVNFLRFCKQHAEGVWAVVDVSIDTIRETS--GAPAFVNCRRLPSGCVVQDMPNGYSK 524
            RE  FLR+C+Q   G+WA+ D+S+D  +  +  GAP   +C RLPSGC++ DM +G SK
Sbjct: 331 TREFCFLRYCRQIEHGLWAIADISVDQQQRDARFGAPPSRSC-RLPSGCLIADMADGSSK 389

Query: 525 VTWVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           VTWVEH E  D   +H LY+ L++SG  FGA RW+A LQR CE  A L +  +
Sbjct: 390 VTWVEHMEIEDRVPIHLLYRDLVLSGAAFGAHRWLAALQRACERCACLATAGI 442


>gi|449434374|ref|XP_004134971.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 721

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/489 (46%), Positives = 314/489 (64%), Gaps = 35/489 (7%)

Query: 103 REDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEK 162
           R+D  + +++SG++ ++ A G D     +  +KKRY+RHT  QIQE+E+ FKECPHPD+K
Sbjct: 22  RDD--DFDNKSGAEILESACGTDQQQQRS--KKKRYNRHTQHQIQEMEAFFKECPHPDDK 77

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 222
           QR+ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN++L+ EN+KLRAEN+  R+A  + 
Sbjct: 78  QRMELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENIRYREAFAHS 137

Query: 223 ICTNCGGPAI-IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSS 281
            C NCG  +  +G++S ++QHLRIEN+RL+DE++R+     K   +P   + P   P  S
Sbjct: 138 TCPNCGSSSTALGEMSFDDQHLRIENSRLRDEIERMSGYGSK-CTKPYYQL-PTNAPTRS 195

Query: 282 LELGVGTINGFGGLSSTVTTTL--PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSM 339
           L+LG   I  FG  SS     +   ADF   IS          R   G        E+ +
Sbjct: 196 LDLG---ITNFGPQSSGFVGEMYGAADFFRSIS----------RPSEG--------EKPV 234

Query: 340 FLELALAAMDELVKMAQTDEPLWIR-SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
            +ELA++ M+EL +MAQ  EPLW+    + SG  VLN  EYLR+F   I  KP GF TEA
Sbjct: 235 IVELAVSGMEELRRMAQGGEPLWVAGDGKSSGEVVLNEAEYLRSFGGGIVGKPMGFRTEA 294

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           SR + +V +N + LV+  MD  +W+ +F  +++R +T +++S G+ G  NGAL +M AE 
Sbjct: 295 SRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGALHVMSAEF 354

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDM 518
           QV SPLVP RE  F+R+CKQ  +G WAV DVS+DT+R +       N RR PSGC++Q++
Sbjct: 355 QVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPS----PIPNTRRKPSGCLIQEL 410

Query: 519 PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
           PNGYSK+TWVEH E DE+ V  +Y+ L+ SG+ FGA+RWVATL RQ E  A  ++T++  
Sbjct: 411 PNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFATSIATTIPT 470

Query: 579 RDHTGIYDI 587
            D   I  I
Sbjct: 471 GDLRVISSI 479


>gi|326525158|dbj|BAK07849.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/457 (48%), Positives = 297/457 (64%), Gaps = 26/457 (5%)

Query: 123 GDDLD-AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           GDDL   +D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR+ LS+ L LE RQ+KFW
Sbjct: 4   GDDLAPGSDAHRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMHLSRELGLEPRQIKFW 63

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQ 241
           FQNRRTQMK Q ER +N  LR ENDK+R EN+++R+A++N IC  CGGP    D   +E 
Sbjct: 64  FQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYFDEH 123

Query: 242 HLRIENARLKDELDRVCALAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGFGGLSSTVT 300
            LR+ENA LK+ELDRV +L  K+LGRP++ +    P+  SSLEL V      GGL S V 
Sbjct: 124 KLRMENAHLKEELDRVSSLTSKYLGRPITQLPSMQPLSMSSLELSV------GGLGSPVA 177

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
                D  T +  + P  +P   S          +ER M  E+A  AMDEL+++AQ  E 
Sbjct: 178 LGPALDLDT-LGGSSPFQLPAPVS---------DMERPMMAEMATRAMDELIRLAQAGEH 227

Query: 361 LWIRSFEGSGRQVLNHEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           LW+++    GR+VLN + Y   F        +      E SR++ +V+  ++ LV+T MD
Sbjct: 228 LWVKT--AGGREVLNVDTYDSIFAKPGSSSFRGPDVHVEGSRDSCLVLTTAIGLVDTFMD 285

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
            ++W E FP ++ R  T DV+ +GM G R+ +L LM+ EL V+SP+VP RE  FLR+C+Q
Sbjct: 286 SSKWTEFFPTVVTRARTIDVLVNGMAG-RSESLVLMYEELHVMSPVVPTREFCFLRYCRQ 344

Query: 479 HAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DES 536
             +G+WA+ DVS+D  R+   GAP     RRLPSGC++ DM NGYSKVTWVEH E  D++
Sbjct: 345 IEQGLWAIADVSVDLQRDARYGAPP-ARSRRLPSGCLIADMSNGYSKVTWVEHMETEDKT 403

Query: 537 QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
            ++QLY+ L++SG  FGA RW+A LQR CE  A L++
Sbjct: 404 PINQLYRDLVLSGAAFGAHRWLAALQRACERHACLVT 440


>gi|15219456|ref|NP_177479.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
 gi|75263138|sp|Q9FX31.1|HDG11_ARATH RecName: Full=Homeobox-leucine zipper protein HDG11; AltName:
           Full=HD-ZIP protein HDG11; AltName: Full=Homeodomain
           GLABRA 2-like protein 11; AltName: Full=Homeodomain
           transcription factor HDG11; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 11
 gi|11120798|gb|AAG30978.1|AC012396_14 homeobox protein, putative [Arabidopsis thaliana]
 gi|28393178|gb|AAO42020.1| putative homeobox protein [Arabidopsis thaliana]
 gi|28827208|gb|AAO50448.1| putative homeobox protein [Arabidopsis thaliana]
 gi|332197328|gb|AEE35449.1| homeobox-leucine zipper protein HDG11 [Arabidopsis thaliana]
          Length = 722

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/456 (48%), Positives = 300/456 (65%), Gaps = 18/456 (3%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           +KKRYHRHT QQIQ LES FKECPHPDEKQR +LS+ L L  RQ+KFWFQNRRTQ+K Q 
Sbjct: 32  KKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQH 91

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +NS L+ ENDK+R EN++IR+A+++ IC NCGGP +  D   +EQ LRIENA L++E
Sbjct: 92  ERADNSALKAENDKIRCENIAIREALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLREE 151

Query: 254 LDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           L+R+  +A K++GRP+S +    PM  S L+L + ++ G G        +L  D   G S
Sbjct: 152 LERMSTIASKYMGRPISQLSTLHPMHISPLDLSMTSLTGCGPFGH--GPSLDFDLLPGSS 209

Query: 313 NALPVVMPPN--RSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
            A   V P N  +S P +   D  +++ +   +AL AM+EL+++ QT+EPLW R+     
Sbjct: 210 MA---VGPNNNLQSQPNLAISD--MDKPIMTGIALTAMEELLRLLQTNEPLWTRT--DGC 262

Query: 371 RQVLNHEEYLRTFTPCIGLKPN-GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           R +LN   Y   F        N  F  EASR +G+V +N++ALV+  MD  +W E+FP +
Sbjct: 263 RDILNLGSYENVFPRSSNRGKNQNFRVEASRSSGIVFMNAMALVDMFMDCVKWTELFPSI 322

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           IA + T  VISSGMGGT  GAL L++ E++VLSPLV  RE   LR+C+Q  +G W VV+V
Sbjct: 323 IAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQTEQGSWIVVNV 382

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIIS 548
           S D  +  S + ++    R PSGC++QDMPNGYSKVTWVEH E +E + VH+LY+ +I  
Sbjct: 383 SYDLPQFVSHSQSY----RFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYREIIHR 438

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           G+ FGA RWV TLQR CE  A L   + S+RD  G+
Sbjct: 439 GIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGV 474


>gi|345195194|tpg|DAA34962.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|413924373|gb|AFW64305.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 698

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/474 (46%), Positives = 302/474 (63%), Gaps = 37/474 (7%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++R+A+R+ IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVA 116

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTING 291
            D   +EQ LR+ENARLK+ELDRV +L  K+LGRP++ + P    +  SSL+L VG   G
Sbjct: 117 DDY-FDEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVG---G 172

Query: 292 FGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDEL 351
            G      + +L  D  +G S+  P    P             +ER M  E+A  AMDEL
Sbjct: 173 LG------SPSLDLDLLSGGSSGYPPFHLPMPVS--------EMERPMMAEMATRAMDEL 218

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINS 409
           ++MAQ  E LW+++    GR+VLN + Y   F        +      E SR++G+V +++
Sbjct: 219 IRMAQAGEHLWVKA---GGREVLNVDTYDSVFAKPGAASFRGPDVHVEGSRDSGLVFMSA 275

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV+  MD ++W E FP ++++  T DV+ +GM G R+ +L LM+ EL V+SP+VP RE
Sbjct: 276 VGLVDMFMDSSKWTEFFPAIVSKARTVDVLVNGMAG-RSESLVLMYEELHVMSPVVPTRE 334

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETS--GAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
             FLR+C+Q   G+WA+ D+S+D  +  +  GAP   +C RLPSGC++ DM +G SKVTW
Sbjct: 335 FCFLRYCRQIERGLWAIADISVDLQQHDARFGAPPSRSC-RLPSGCLIADMADGSSKVTW 393

Query: 528 VEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VEH E  D   +H LY+ LI+SG  FGA RW+A LQR CE  A L+   +  RD
Sbjct: 394 VEHMEIEDRVPIHLLYRDLILSGAAFGAHRWLAALQRACERCACLVPAGMPHRD 447


>gi|242063218|ref|XP_002452898.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
 gi|241932729|gb|EES05874.1| hypothetical protein SORBIDRAFT_04g034580 [Sorghum bicolor]
          Length = 707

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/478 (46%), Positives = 302/478 (63%), Gaps = 37/478 (7%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++R+A+R  IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRTVICHTCGGPPVT 116

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
            D   +EQ LR+ENARLK+ELDRV +L  K+LGRP++ + PP  P S       ++ G G
Sbjct: 117 DDY-FDEQKLRMENARLKEELDRVSSLTSKYLGRPITQL-PPVQPLSMSSSLDLSVGGLG 174

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
             S  +  +L  D  +G S+  P    P             +ER M  E+A  AMDEL++
Sbjct: 175 --SPALGPSLDLDLLSGGSSGYPPFHLPMTVS--------EMERPMMAEMATRAMDELIR 224

Query: 354 MAQTDEPLWIRSFEG--SGRQVLNHEEYLRTFTPCIGLKPNGFV------TEASRETGMV 405
           MAQ  E LW+++  G   GR+VLN + Y   F      KP G         E SR++G+V
Sbjct: 225 MAQAGEHLWVKTAGGGPDGREVLNVDTYDSIFA-----KPGGSFRGPDVHVEGSRDSGLV 279

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLV 465
            ++++ LV+  MD +++ E FP ++++  T DV+ +GM G R+ +L LM+ EL ++SP+V
Sbjct: 280 FMSAIGLVDMFMDSSKFTEFFPAIVSKARTMDVLVNGMAG-RSDSLVLMYEELHMMSPVV 338

Query: 466 PVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS--GAPAFVNCRRLPSGCVVQDMPNGYS 523
           P RE  FLR+C+Q   G+WA+ D+S+D  +  +  GAP   +C RLPSGC++ DM +G S
Sbjct: 339 PTREFCFLRYCRQIEHGLWAIADISVDLQQRDARFGAPPSRSC-RLPSGCLIADMADGSS 397

Query: 524 KVTWVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           KVTWVEH E  D   +H LY+ LI+SG  FGA RW+A LQR CE  A L +  +  RD
Sbjct: 398 KVTWVEHMEIEDRVPIHLLYRDLILSGAAFGAHRWLAALQRACERCACLATAGMPHRD 455


>gi|226498004|ref|NP_001142912.1| uncharacterized protein LOC100275344 [Zea mays]
 gi|195611342|gb|ACG27501.1| hypothetical protein [Zea mays]
          Length = 698

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/474 (46%), Positives = 301/474 (63%), Gaps = 37/474 (7%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++R+A+R+ IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVA 116

Query: 234 GDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTING 291
            D   +EQ LR+ENARLK+ELDRV +L  K+LGRP++ + P    +  SSL+L VG   G
Sbjct: 117 DDY-FDEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVG---G 172

Query: 292 FGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDEL 351
            G      + +L  D  +G S+  P    P             +ER M  E+A  AMDEL
Sbjct: 173 LG------SPSLDLDLLSGGSSGYPPFHLPMSVS--------EMERPMMAEMATRAMDEL 218

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINS 409
           ++MAQ  E LW+++    GR+VLN + Y   F        +      E SR++G+V +++
Sbjct: 219 IRMAQAGEHLWVKA---GGREVLNVDTYDSVFAKPGAASFRGPDVHVEGSRDSGLVFMSA 275

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV+  MD ++W E FP ++++  T DV+ +GM G R+ +L LM+ EL V+SP+VP RE
Sbjct: 276 VGLVDMFMDSSKWTEFFPAIVSKARTVDVLVNGMAG-RSESLVLMYEELHVMSPVVPTRE 334

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETS--GAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
             FLR+C+Q   G+WA+ D+S+D  +  +  GAP   +C RLPSGC++ DM +G SKVTW
Sbjct: 335 FCFLRYCRQIERGLWAIADISVDLQQHDARFGAPPSRSC-RLPSGCLIADMADGSSKVTW 393

Query: 528 VEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VEH E  D   +H LY+ LI+SG   GA RW+A LQR CE  A L+   +  RD
Sbjct: 394 VEHMEIEDRVPIHLLYRDLILSGAALGAHRWLAALQRACERCACLVPAGMPHRD 447


>gi|226509342|ref|NP_001145713.1| uncharacterized protein LOC100279217 [Zea mays]
 gi|219884129|gb|ACL52439.1| unknown [Zea mays]
          Length = 672

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/438 (49%), Positives = 288/438 (65%), Gaps = 26/438 (5%)

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+ FKECPHPD+KQR ELS+ L L   QVKFWFQN+RTQMK Q ER ENS LR EN+KL
Sbjct: 1   MEAFFKECPHPDDKQRKELSRELGLVPLQVKFWFQNKRTQMKNQHERQENSQLRAENEKL 60

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           RAENM  ++A+ +  C NCGGPA +G++S +E HLR+ENARL++E+DR+ A+A K++G+P
Sbjct: 61  RAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLREEIDRISAIAAKYVGKP 120

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGV 328
           + S      P +        I+  G L    T    AD   G                  
Sbjct: 121 MVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIFGGGGGVA------------A 168

Query: 329 TGLDRSIERSMFLELALAAMDELVKMAQTDEPLW---IRSFEGSGRQVLNHEEYLRTFTP 385
            G  R  ++ M +ELA+ AM+ELV+MAQ DEPLW       +GS  + LN EEY R F P
Sbjct: 169 CGAARDCDKPMIVELAVTAMEELVRMAQLDEPLWNAPAGGHDGSA-ETLNEEEYARMFVP 227

Query: 386 CIGL---KPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG 442
             GL   K  GF +EASR++ +VI+   +LVE LMD N++A +F  +++R AT +V+S+G
Sbjct: 228 AGGLGLKKQYGFKSEASRDSSVVIMTHASLVEILMDVNQYATVFSSIVSRAATLEVLSTG 287

Query: 443 MGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA 502
           + G  NGALQ+M  E QV SPLVP R+  F+R+CKQ+A+G WAVVDVS+DT        +
Sbjct: 288 VAGNYNGALQVMSVEFQVPSPLVPTRDSYFVRYCKQNADGTWAVVDVSLDT-------SS 340

Query: 503 FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            + CRR PSGC++Q+MPNGYSKVTWVEH E D+  V+ +YK L+ SG+ FGA+RWV TL 
Sbjct: 341 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIYKLLVDSGLAFGARRWVGTLD 400

Query: 563 RQCECLAILMSTSVSARD 580
           RQCE LA +M++++   D
Sbjct: 401 RQCERLASVMASNIPTSD 418


>gi|218200586|gb|EEC83013.1| hypothetical protein OsI_28071 [Oryza sativa Indica Group]
          Length = 765

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/475 (47%), Positives = 303/475 (63%), Gaps = 42/475 (8%)

Query: 108 EHESRSGSDNMDGA----SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E ES+S S+N+DGA    SGDD D  +  PRKKRYHRHT  QIQE+E+ FKECPHPD+KQ
Sbjct: 71  EFESKSCSENVDGAGDGLSGDDQDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 129

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           R ELS+ L LE              ++ Q ERHEN+ LR ENDKLRAENM  ++A+ +  
Sbjct: 130 RKELSRELGLEP-------------LQNQHERHENAQLRAENDKLRAENMRYKEAVSSAS 176

Query: 224 CTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP-VSSMGPPPMPNSSL 282
           C     P  +G++S +E HLR+E ARL+DE+DR+  +A K +G+P + S    P+ +S L
Sbjct: 177 CPIAVVPPALGEMSFDEHHLRVEYARLRDEIDRISGIAAKHVGKPPIVSF---PVLSSPL 233

Query: 283 ELGVG-TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFL 341
            +    +     G    VT  L  D   G  + L  V P +   P            M +
Sbjct: 234 AVAAARSPLDLAGAYGVVTPGL--DMFGGAGDLLRGVHPLDADKP------------MIV 279

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRE 401
           ELA+AAMDELV+MAQ DEPLW  S E +   +L+ EEY R F   +G K  G  +EASR 
Sbjct: 280 ELAVAAMDELVQMAQLDEPLWSSSSEPAA-ALLDEEEYARMFPRGLGPKQYGLKSEASRH 338

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
             +VI+    LVE LMD N++A +F  +++R +T +V+S+G+ G  NGALQ+M  E QV 
Sbjct: 339 GAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSMEFQVP 398

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNG 521
           SPLVP RE  F+R+CK +++G WAVVDVS+D++R +        CRR PSGC++Q+MPNG
Sbjct: 399 SPLVPTRESYFVRYCKNNSDGTWAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNG 454

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           YSKVTWVEH E D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++++
Sbjct: 455 YSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNI 509


>gi|413944021|gb|AFW76670.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 732

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/511 (42%), Positives = 313/511 (61%), Gaps = 68/511 (13%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELES------------------------------- 151
           GD+ + +D+  ++KRYHRHTP+QIQ+LE+                               
Sbjct: 4   GDEPEGSDSQRQRKRYHRHTPRQIQQLEAYDLASFPFLLLLLYSVRPPLWLFVVRRDGLA 63

Query: 152 --------------LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
                         +FKECPHPDE QR  LS+ L LE RQ+KFWFQNRRTQMK Q ER +
Sbjct: 64  ERNVMACVLAHDCRMFKECPHPDENQRAALSRELGLEPRQIKFWFQNRRTQMKAQHERAD 123

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRV 257
           N  LR ENDK+R EN+++R+A++N IC +CGGP +  D   +EQ LR+ENARLK+ELDRV
Sbjct: 124 NCFLRAENDKIRCENITMREALKNVICPSCGGPPVDEDF-FDEQKLRMENARLKEELDRV 182

Query: 258 CALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALP 316
            ++  K+LGRP + M P P M  SSL+L VG +   GG S      L  D  +G S+ LP
Sbjct: 183 SSITSKYLGRPFTQMPPVPTMSVSSLDLSVGGMGSLGGPS------LDLDLLSGCSSGLP 236

Query: 317 VVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNH 376
             +P   +          +ER M +++A  AMDEL+++AQ  E +W++   G  R+VL+ 
Sbjct: 237 YQVPAPVT---------EMERPMMVDMAARAMDELIRLAQAGEQIWVKGVPGDAREVLDV 287

Query: 377 EEYLRTFT-PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
             Y   F  P    +P     EASR++G+V ++++ALV+  MD N+W E FP ++++  T
Sbjct: 288 GTYDSLFAKPGAAFRPPDINVEASRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQT 347

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR 495
            DV+ +G+GG R+ +L +M+ EL +++P+VP RE++FLR+CKQ  +G+WAV DVS++  R
Sbjct: 348 VDVLVNGLGG-RSESLIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLEGQR 406

Query: 496 ETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFG 553
           +   G P+    RR+PSGC++ DM NGYSKVTWVEH E ++   ++ LY+ L++SG  FG
Sbjct: 407 DAHYGVPS--RSRRMPSGCLIADMSNGYSKVTWVEHMEIEQMLPINVLYRNLVLSGAAFG 464

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           A RW+A LQR CE  A + +  V   D  G+
Sbjct: 465 AHRWLAALQRACERFASVATLGVPHHDVAGV 495


>gi|449454863|ref|XP_004145173.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449474595|ref|XP_004154226.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
 gi|449516709|ref|XP_004165389.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 696

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/467 (47%), Positives = 305/467 (65%), Gaps = 27/467 (5%)

Query: 118 MDGASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           MD   G++  D  +   ++KRYHRHT  QIQE+E+ FKECPHPD+KQR +LS+ L LE  
Sbjct: 1   MDAPLGEEQCDLLNQRNKRKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSRELGLEPL 60

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QVKFWFQN+RTQ+K Q ERHEN++L+ +N+KLRAENM  ++A+ N  C NCGGPA +G++
Sbjct: 61  QVKFWFQNKRTQIKAQQERHENAILKAQNEKLRAENMRYKEALSNTSCPNCGGPAALGEM 120

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
           S + QHLRI+NA L+DE++R+     K+ G+   S       +SS  +  G   G  G S
Sbjct: 121 SFDAQHLRIDNAHLRDEIERLNG-NNKYGGKGWGS-------HSSHIVSCG---GQVGRS 169

Query: 297 STVTTTLPAD---FGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
           S     L  D    G         +M  + S      +   I++ + +ELA++AM+E+ +
Sbjct: 170 SLKPQQLQGDDHLLGDMYGETTTGMMLKSSS------VTTEIDKPVIVELAVSAMEEVCR 223

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           MAQ  EPLW+     +  ++LN +EYLRT++  IG +  G  +EASR+T ++  N L LV
Sbjct: 224 MAQEGEPLWV--VGENSMEMLNEDEYLRTYSTRIGPRIVGLTSEASRQTSILAFNHLKLV 281

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
             LMD N+W+ +F  +++R  T +V+SSG+GG  NGALQ+M AE QV SPLVP RE  F+
Sbjct: 282 HILMDVNQWSTIFCGIVSRALTLEVLSSGVGGDYNGALQVMTAEFQVPSPLVPTRENYFV 341

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           R+CKQ  EG WAVVDVS+D +R T  +      RR PSGC++Q++PNGYSKVTWVEH E 
Sbjct: 342 RYCKQQGEGSWAVVDVSLDYLRPTPTS----RTRRRPSGCLIQELPNGYSKVTWVEHVEV 397

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           D+  VH LYK ++  G+ FGA+RW+ATL RQC+ L    ST++ A D
Sbjct: 398 DDRAVHSLYKGVVTCGLAFGAKRWMATLGRQCQRLTNSSSTNIPALD 444


>gi|345193171|tpg|DAA34951.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 787

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/463 (47%), Positives = 295/463 (63%), Gaps = 66/463 (14%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            P RKK Y+RHTP+QI++LE++FKE  HPDEKQR +LS++L L+ RQVKFWFQNRRT +K
Sbjct: 133 KPKRKKPYNRHTPRQIEQLEAMFKEFHHPDEKQRAQLSRQLGLDPRQVKFWFQNRRTHLK 192

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
            QLER EN+ L+ ENDKLR EN+SIR+A+R+ +C+ CGGPA++G++S EE  LR+ENARL
Sbjct: 193 NQLERQENARLKHENDKLRVENLSIREAIRDLVCSCCGGPAVLGELSPEEHQLRLENARL 252

Query: 251 KDELDRVCALAGKFLGRPVSSM------GPPPMPNSSLELGVGTINGFGGLSSTVTTTLP 304
           +DEL RVC +  KF+G+P+S M       P PM  SSLEL V    G    SS +  +  
Sbjct: 253 RDELARVCTVTSKFIGKPMSHMELLLAKEPHPMTGSSLELAVAVGVGSSVPSSKMPVSTI 312

Query: 305 ADFGTGISNALPVVMPP--NRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW 362
           ++     S++   V  P    S P V     SI++S F +LA++AM+ELVKMA+ +EPLW
Sbjct: 313 SELAGSTSSSTGTVTTPMVTASLPMV-----SIDKSKFAQLAVSAMNELVKMARMNEPLW 367

Query: 363 IRSFEGSGR---QVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIIN-SLALVETLMD 418
           I +    G    + LN +EYL+ F+PC+G+KP GFV+EASRE+G+V I+ S AL+E  MD
Sbjct: 368 IPTIPSPGSPIMETLNFKEYLKAFSPCVGVKPTGFVSEASRESGIVTIDSSAALMEVFMD 427

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
             RW+++F C++A+ +  + I  G                                    
Sbjct: 428 ERRWSDIFYCIVAKASIVEEILPG------------------------------------ 451

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
                      SID ++          CRRLPSGCV+QD PNG  KVTWVEHAEY E+ V
Sbjct: 452 -----------SIDGLQTDQCLATNTKCRRLPSGCVLQDTPNG-CKVTWVEHAEYPEASV 499

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
           HQLY+PL+ SG+  GA RW+ATLQRQCECLAILMS S++A +H
Sbjct: 500 HQLYQPLMRSGLALGAGRWLATLQRQCECLAILMS-SLAAPEH 541


>gi|33355394|gb|AAQ16127.1| homeodomain protein BNLGHi6863 [Gossypium hirsutum]
          Length = 762

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/470 (45%), Positives = 302/470 (64%), Gaps = 33/470 (7%)

Query: 114 GSDNMDGASGDDL-DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           G + M   S  +L +  + P +KKRYHRHT  QIQELE++FKECPHPD+KQR++LS+ L 
Sbjct: 55  GKEEMKSGSESELQETTEQPLKKKRYHRHTAHQIQELEAVFKECPHPDDKQRMKLSQELG 114

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           L+ RQVKFWFQNRRTQMK Q +R E+ +LR END L++E   ++  +   +C NCGGP +
Sbjct: 115 LKPRQVKFWFQNRRTQMKAQQDRSEDVILRAENDSLKSEFYRLQAELSKLVCPNCGGPPV 174

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
            G +S +E  LRIENARL +EL+RVCA+A +++GRP+ +MG    P+  L++ +      
Sbjct: 175 PGGVSFDE--LRIENARLGEELERVCAIASRYIGRPIQTMGALMPPSLELDMNI------ 226

Query: 293 GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD-RSIERSMFLELALAAMDEL 351
                      P  F       +P  +    S P    L     E+++ +ELA++A DEL
Sbjct: 227 ----------YPRQF----LEPMPPTLSETPSYPDNNNLILMEEEKTIAMELAMSATDEL 272

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG--FVTEASRETGMVIINS 409
            KM +T+ P    + E +G++VLN +E+ R F   + LK     F TEASR++ +VI+NS
Sbjct: 273 AKMCRTN-PFGFVNNE-TGKEVLNLDEHSRMFHWPLNLKQRSSEFRTEASRDSSVVIMNS 330

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV+  +D N+W E+FP ++AR     VIS G+ GT NG LQLM+AEL  LSPLVP RE
Sbjct: 331 ITLVDAFVDANKWMELFPSIVARAKCVQVISQGVSGT-NGCLQLMYAELHCLSPLVPTRE 389

Query: 470 VNFLRFCKQHA---EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVT 526
             FLR+C+Q     E  WA+VD  +D     S   +F   +R PSGC++QDMPNGYS+VT
Sbjct: 390 AYFLRYCQQQNVEDETYWAIVDFPLDGFH-NSLQTSFPLYKRRPSGCLIQDMPNGYSRVT 448

Query: 527 WVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           WVEHAE +E  +HQ++   + SGM FGA RW+A L+RQCE +A LM+T++
Sbjct: 449 WVEHAEIEEKPIHQIFSHFVHSGMAFGANRWLAVLERQCERIASLMATNI 498


>gi|297743262|emb|CBI36129.3| unnamed protein product [Vitis vinifera]
          Length = 750

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/454 (47%), Positives = 291/454 (64%), Gaps = 52/454 (11%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 98  YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 157

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD--ISLEEQHLRIENARLKDELD 255
           NSLL+ E +KLR EN ++R+ ++   C NCG      D  ++ EEQ LRIENARLK E++
Sbjct: 158 NSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLKAEVE 217

Query: 256 RVCALAGKFLGRPVSSMGPPPM--PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
           ++ A+ GK+         PP    P+SS   G    N     SS        +F TGI  
Sbjct: 218 KLRAVIGKY---------PPGTGSPSSSCSAG----NDHENRSSL-------EFYTGIFG 257

Query: 314 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 373
                                +E+S  +E+   AM+EL KMA   EPLWIRS E +GR++
Sbjct: 258 ---------------------LEKSRIMEIVNQAMEELKKMATAGEPLWIRSVE-TGREI 295

Query: 374 LNHEEYLRTFTPCIGLKPNGF---VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
           LN++EY+R F+  +    NG      EASRETG+V ++   LV++ MD N+W EMFPC I
Sbjct: 296 LNYDEYMREFS--VENSGNGRPKRSIEASRETGVVFVDLPRLVQSFMDVNQWKEMFPCTI 353

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           ++ AT D+I +G G  RNGA+QLM AELQ+L+P+VP REV F+RFCKQ +   WA+VDVS
Sbjct: 354 SKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVS 413

Query: 491 IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           ID + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S VH +Y+ ++ SG+
Sbjct: 414 IDKVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGL 472

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+ W+ATLQ QCE L   M+T+V  +D +G+
Sbjct: 473 AFGAKHWIATLQLQCERLVFFMATNVPTKDSSGV 506


>gi|413939125|gb|AFW73676.1| putative homeobox/lipid-binding domain family protein [Zea mays]
          Length = 735

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/520 (44%), Positives = 310/520 (59%), Gaps = 79/520 (15%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G D MDG S       D   RKKRYHRHTP+QIQ+LE++FKECPHPDE QR++LS+ L L
Sbjct: 4   GDDVMDGGS-------DAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGL 56

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           E RQ+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++++A+RN IC  CGGP + 
Sbjct: 57  EPRQIKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMQEALRNVICPTCGGPPVA 116

Query: 234 GDISLEEQHLRIENARLKDE----------------------------------LDRVCA 259
            D   +EQ LR+ENARLK+E                                  LDRV +
Sbjct: 117 DD-HFDEQKLRMENARLKEEASRFAFTIALAPGPASLDGPAILPRSSFTFTSGDLDRVSS 175

Query: 260 LAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVV 318
           L  K+LGRP++ +     +  SSL+L VG   G GG S      L  D  +G S+     
Sbjct: 176 LTSKYLGRPITQLPSAQALSMSSLDLSVG---GLGGPS------LDLDLLSGGSSGY--- 223

Query: 319 MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEE 378
            PP    P        +ER M  E+A  AMDEL++MAQ  E LW+++    GR+VLN + 
Sbjct: 224 -PPFHLLPMAVS---EMERPMMAEMATRAMDELIRMAQAGEHLWVKT---GGREVLNVDT 276

Query: 379 YLRTFTPCIGLKPNGFV------TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIAR 432
           Y   F      KP+G         E SRETG+V ++++ LV+  MD ++W E+FP ++++
Sbjct: 277 YDSIFA-----KPDGSFRGPDVHVEGSRETGLVFMSAIGLVDMFMDSSKWTELFPAIVSK 331

Query: 433 TATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID 492
             T DV+ +GMGG R+ +L LM+ EL V+SP+VP RE  FLR+C+Q   G+WA+ D+S+D
Sbjct: 332 ARTVDVLVNGMGG-RSESLLLMYEELHVMSPVVPTREFCFLRYCRQIEHGLWAIADISVD 390

Query: 493 TIRETS--GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQVHQLYKPLIISG 549
             +  +  GAP   +C RLPSGC++ DM +G SKVTWVEH E  D   +H LY+ L++SG
Sbjct: 391 QQQRDARFGAPPSRSC-RLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLVLSG 449

Query: 550 MGFGAQRWVATLQRQCECLAILMSTSV-SARDHTGIYDIN 588
             FGA RW+A LQR CE  A L +  +   RD     DI+
Sbjct: 450 AAFGAHRWLAALQRACERCACLATAGIMPHRDIAAAGDIS 489


>gi|225442611|ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/454 (47%), Positives = 291/454 (64%), Gaps = 52/454 (11%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 102 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 161

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD--ISLEEQHLRIENARLKDELD 255
           NSLL+ E +KLR EN ++R+ ++   C NCG      D  ++ EEQ LRIENARLK E++
Sbjct: 162 NSLLKSEMEKLRDENKAMRETIKKSCCPNCGSATSSRDPTMTTEEQQLRIENARLKAEVE 221

Query: 256 RVCALAGKFLGRPVSSMGPPPM--PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
           ++ A+ GK+         PP    P+SS   G    N     SS        +F TGI  
Sbjct: 222 KLRAVIGKY---------PPGTGSPSSSCSAG----NDHENRSSL-------EFYTGIFG 261

Query: 314 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 373
                                +E+S  +E+   AM+EL KMA   EPLWIRS E +GR++
Sbjct: 262 ---------------------LEKSRIMEIVNQAMEELKKMATAGEPLWIRSVE-TGREI 299

Query: 374 LNHEEYLRTFTPCIGLKPNGF---VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
           LN++EY+R F+  +    NG      EASRETG+V ++   LV++ MD N+W EMFPC I
Sbjct: 300 LNYDEYMREFS--VENSGNGRPKRSIEASRETGVVFVDLPRLVQSFMDVNQWKEMFPCTI 357

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           ++ AT D+I +G G  RNGA+QLM AELQ+L+P+VP REV F+RFCKQ +   WA+VDVS
Sbjct: 358 SKAATVDIICNGEGPNRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSADQWAIVDVS 417

Query: 491 IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           ID + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S VH +Y+ ++ SG+
Sbjct: 418 IDKVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRQIVNSGL 476

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+ W+ATLQ QCE L   M+T+V  +D +G+
Sbjct: 477 AFGAKHWIATLQLQCERLVFFMATNVPTKDSSGV 510


>gi|356550528|ref|XP_003543638.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 762

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/579 (41%), Positives = 334/579 (57%), Gaps = 90/579 (15%)

Query: 32  DNNNNNNMPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLALQ------------------ 73
           D +NNNN P              P   +K +F SP LSL+L                   
Sbjct: 4   DMSNNNNPP--------------PTSHAKDLFASPALSLSLAGIFRHAGVAAADEAATSV 49

Query: 74  QPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPP 133
           +   +  GG   +L+ +     G    RS +D    E+    D  D A GD+ +      
Sbjct: 50  EEGEEGSGGAAERLEEISSENSGPTRSRSEDDFEGGEAEPEDD--DDAHGDNKNKKTKK- 106

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           ++K+YHRHT  QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   
Sbjct: 107 KRKKYHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQ 166

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD--ISLEEQHLRIENARLK 251
           ERHENSLL+ E +KL+ +N S+R+ +    C NCG P    D  +  EEQ LRIENA+LK
Sbjct: 167 ERHENSLLKSEIEKLKEKNKSLRETINKACCPNCGVPTTSRDGVMPTEEQQLRIENAKLK 226

Query: 252 DELDRVCALAGKFL---GRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            E++++ A  GK+      P  S G      SSL                       DF 
Sbjct: 227 AEVEKLRAALGKYAPGSTSPSCSSGHDQENRSSL-----------------------DFY 263

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG 368
           TGI                  GLD+S      +++   AM+EL+KMA   EPLW+RSFE 
Sbjct: 264 TGI-----------------FGLDKS----RIMDIVNQAMEELIKMATVGEPLWLRSFE- 301

Query: 369 SGRQVLNHEEYLRTFT---PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
           +GR++LN++EY++ F         KP   + EASR+T +V ++  +LV++ +D N+W EM
Sbjct: 302 TGREILNYDEYVKEFAVENSSSSGKPKRSI-EASRDTAVVFVDLPSLVQSFLDVNQWKEM 360

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
           FPC+I++ AT DVI +G G +RNGA+QLM AELQ+L+P+VP REV F+RFCKQ +   WA
Sbjct: 361 FPCLISKAATVDVICNGEGLSRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWA 420

Query: 486 VVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           +VDVSID + +   A + V CR+ PSGC+++D  NG+ KV WVEH+E  +S VH +Y+ +
Sbjct: 421 IVDVSIDKVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHSECQKSAVHSMYRTI 479

Query: 546 IISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           + SG+ FGA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 480 VNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGV 518


>gi|449436842|ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 803

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/534 (42%), Positives = 335/534 (62%), Gaps = 43/534 (8%)

Query: 59  SKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDN- 117
           ++S+F+SP     +Q PN +           + +   G++ R  +ED+   ES SGS+  
Sbjct: 19  TESLFSSP-----IQNPNFNFISNFQHFPSIVPKEENGLMMRGGKEDM---ESGSGSEQL 70

Query: 118 --------MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
                   M+    ++        +KKRYHRHT +QIQE+E+LFKECPHPD+KQRL+LS+
Sbjct: 71  VEENQGIEMESNINNNDSITQQNQKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSQ 130

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L L+ RQVKFWFQNRRTQMK Q +R +N +LR EN+ L+ EN  ++ A+RN IC +CGG
Sbjct: 131 ELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENETLKNENYRLQSALRNIICPSCGG 190

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVG 287
             I+G+ SL+EQ LR+ENARL+D+L++VC++  ++ GRP+ +M    PP+   SL+L + 
Sbjct: 191 QGILGEPSLDEQQLRLENARLRDQLEQVCSMTTRYTGRPIQAMASAAPPLMQPSLDLDMN 250

Query: 288 TINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAA 347
                   S   T  +     +    ALP ++PP  +     GL    E+++ ++LA+++
Sbjct: 251 I------YSRQYTEAM---VPSSDMMALPSMLPPEAAHFPEGGLLIEEEKTLAMDLAVSS 301

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP---NGFVTEASRETGM 404
           + ELVKM +  EPLW+R  E SG++VLN EE+ R F   + LK    N F TEA+R++ +
Sbjct: 302 IAELVKMCRLTEPLWVRDNE-SGKEVLNVEEHGRMFPWPLNLKQHLINEFRTEATRDSAV 360

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           VI+NS+ LV+  +D N+W E+FP ++A+  T  VISS + G  + +LQ++         +
Sbjct: 361 VIMNSITLVDAFLDANKWMELFPSIVAKAKTVQVISSSVSGHASSSLQVV---------I 411

Query: 465 VPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
                 +FLR C+Q+A EG W VVD  ID+  + S   +F   RR PSGC++QDMPNGYS
Sbjct: 412 FFFFFAHFLRCCQQNADEGSWTVVDFPIDSFHD-SLQHSFPRYRRKPSGCIIQDMPNGYS 470

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +VTWVEHAE +E  +HQ++   + SGM FGA RW+A LQRQCE +A LM+ ++S
Sbjct: 471 RVTWVEHAEIEEKPIHQIFNHFVHSGMAFGANRWLAILQRQCERIASLMARNIS 524


>gi|76782208|gb|ABA54874.1| baby boom interacting protein 1A [Brassica napus]
          Length = 718

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/466 (46%), Positives = 296/466 (63%), Gaps = 37/466 (7%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D ++   +KKRYHRHT QQIQ LES FKECPHPD+KQR +LS+ L L  RQ+KFWFQNRR
Sbjct: 29  DGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSRELGLAPRQIKFWFQNRR 88

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQ+K Q ER +N+ L+ ENDK+R EN++IR+A+++ IC NCGGP +  D   +E  LRIE
Sbjct: 89  TQLKAQHERADNNALKAENDKIRCENIAIREAIKHAICPNCGGPPVNEDPYFDEHKLRIE 148

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGPP--PMPNSSLELGVGTINGFGGLSSTVTTTLP 304
           NA L+DEL+R+  +A K++GRP+SS      P+  S L+L            S    +L 
Sbjct: 149 NAHLRDELERMSTVASKYMGRPISSHLSTLHPLHISPLDL------------SMTGPSLD 196

Query: 305 ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR 364
            D   G S    +   PN +   ++ +D+ +      ++AL AM+EL+++  T+EPLW R
Sbjct: 197 FDLLPGSS----MHSHPNNNLATISEMDKPLMN----DIALTAMEELLRLFNTNEPLWTR 248

Query: 365 SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV-TEASRETGMVIINSLALVETLMDPNRWA 423
           +    GR++L+   Y   F        N  V TEASR +G+V +N++ LV+  MD  +W 
Sbjct: 249 A--DGGREILDLGSYENLFPRSGNRGKNHNVRTEASRSSGIVFMNAMTLVDMFMDGVKWG 306

Query: 424 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 483
           E+FPC++A + T  V+SSGMGGT  GAL LM+ E+ VLSPLV  RE   LR+C+   +G 
Sbjct: 307 ELFPCIVASSKTLAVVSSGMGGTHEGALHLMYEEMAVLSPLVATREFCELRYCQMIEQGS 366

Query: 484 WAVVDVSIDTIRETSGAPAFV----NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QV 538
           W VV+VS          P FV    +  + PSGC++QDMPNGYSKVTWVEH E +E  Q 
Sbjct: 367 WIVVNVSYHL-------PQFVSQSSHSYKFPSGCLIQDMPNGYSKVTWVEHVETEEKEQT 419

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           H+LY+ +I  G+ FGA+RWV TLQR CE  A L++ S S+RD  G+
Sbjct: 420 HELYREVIHKGIAFGAERWVTTLQRMCERFASLLAPSTSSRDLGGV 465


>gi|163860158|gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/452 (47%), Positives = 288/452 (63%), Gaps = 49/452 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT  QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 160

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCG--GPAIIGDISLEEQHLRIENARLKDELD 255
           NSLL+QE +KLR EN ++R+ +    C NCG    A  G I+ EEQ LRIENA+LK E++
Sbjct: 161 NSLLKQELEKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLKAEVE 220

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++  + GK+          PP  +++     G  N     SS        DF TGI    
Sbjct: 221 KLRTVIGKY----------PPGASTTGSCSSG--NDQENRSSL-------DFYTGIFG-- 259

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                              +E+S  +E+   AM+EL KMA   EPLW+RS E +GR++LN
Sbjct: 260 -------------------LEKSRIMEIVNQAMEELQKMATAGEPLWVRSVE-TGREILN 299

Query: 376 HEEYLRTFTPCIGLKPNGF---VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIAR 432
           ++EY++ F+  +    NG      EASRETG+V ++   LV++ MD N+W EMFPC+I++
Sbjct: 300 YDEYVKEFS--VESSSNGRPKRSIEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISK 357

Query: 433 TATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID 492
            AT DVI  G    +NGA+QLM AELQ+L+PLVP REV F+R+CKQ +   WA+VDVSID
Sbjct: 358 AATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSID 417

Query: 493 TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
            + E   A + V CR+ PSGC++QD  NG+ KV WVEH E  ++ VH LY+ ++ SG+ F
Sbjct: 418 KVEENIDA-SLVKCRKRPSGCIIQDTTNGHCKVIWVEHXECQKNTVHTLYRTIVRSGLAF 476

Query: 553 GAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           GA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 477 GARHWMATLQHQCEGLFFFMATNVPTKDSTGV 508


>gi|22475195|gb|AAM97321.1| homeodomain protein GhHOX1 [Gossypium hirsutum]
          Length = 753

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/452 (47%), Positives = 287/452 (63%), Gaps = 49/452 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT  QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 101 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 160

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCG--GPAIIGDISLEEQHLRIENARLKDELD 255
           NSLL+QE DKLR EN ++R+ +    C NCG    A  G I+ EEQ LRIENA+LK E++
Sbjct: 161 NSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGSITAEEQQLRIENAKLKAEVE 220

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++  + GK+          PP  +++     G  N     SS        DF TGI    
Sbjct: 221 KLRTVIGKY----------PPGASTTGSCSSG--NDQENRSSL-------DFYTGIFG-- 259

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                              +E+S  +E+   AM+EL KMA   EPLW+RS E +GR++LN
Sbjct: 260 -------------------LEKSRIMEIVNQAMEELQKMATAGEPLWVRSVE-TGREILN 299

Query: 376 HEEYLRTFTPCIGLKPNGF---VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIAR 432
           ++EY++  +  +    NG      EASRETG+V ++   LV++ MD N+W EMFPC+I++
Sbjct: 300 YDEYVKELS--VESSSNGRPKRSIEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISK 357

Query: 433 TATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID 492
            AT DVI  G    +NGA+QLM AELQ+L+PLVP REV F+R+CKQ +   WA+VDVSID
Sbjct: 358 AATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSID 417

Query: 493 TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
            + E   A + V CR+ PSGC++QD  NG+ KV WVEH E  ++ VH LY+ ++ SG+ F
Sbjct: 418 KVEENIDA-SLVKCRKRPSGCIIQDTTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAF 476

Query: 553 GAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           GA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 477 GARHWMATLQHQCERLVFFMATNVPTKDSTGV 508


>gi|13346176|gb|AAK19610.1|AF336277_1 BNLGHi8377 [Gossypium hirsutum]
          Length = 758

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/452 (47%), Positives = 287/452 (63%), Gaps = 49/452 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT  QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 106 YHRHTADQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 165

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD--ISLEEQHLRIENARLKDELD 255
           NSLL+QE DKLR EN ++R+ +    C NCG      D  I+ EEQ LRIENA+LK E++
Sbjct: 166 NSLLKQELDKLRDENKAMRETINKACCLNCGMATTAKDGFITAEEQQLRIENAKLKAEVE 225

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++  + GK+          PP  +++     G  N     SS        +F TGI    
Sbjct: 226 KLRTVIGKY----------PPGASTTGSCSSG--NDQENRSSL-------NFYTGIF--- 263

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                             ++E+S  +E+   AM+EL KMA   EPLW+RS E +GR++LN
Sbjct: 264 ------------------ALEKSRIMEIVNQAMEELQKMATAGEPLWVRSVE-TGREILN 304

Query: 376 HEEYLRTFTPCIGLKPNGF---VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIAR 432
           ++EY++  +  +    NG      EASRETG+V ++   LV++ MD N+W EMFPC+I++
Sbjct: 305 YDEYVKELS--VESSSNGRPKRSIEASRETGVVFLDLPRLVQSFMDANQWKEMFPCIISK 362

Query: 433 TATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID 492
            AT DVI  G    +NGA+QLM AELQ+L+PLVP REV F+R+CKQ +   WA+VDVSID
Sbjct: 363 AATVDVICHGEAPNKNGAVQLMFAELQMLTPLVPTREVYFVRYCKQLSAEQWAIVDVSID 422

Query: 493 TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
            + E   A + V CR+ PSGC++QD  NG+ KV WVEH E  ++ VH LY+ ++ SG+ F
Sbjct: 423 KVEENIDA-SLVKCRKRPSGCIIQDKTNGHCKVIWVEHLECQKNTVHTLYRTIVRSGLAF 481

Query: 553 GAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           GA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 482 GARHWMATLQHQCERLVFFMATNVPTKDSTGV 513


>gi|356556218|ref|XP_003546423.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 747

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/571 (41%), Positives = 324/571 (56%), Gaps = 89/571 (15%)

Query: 34  NNNNNMPTTTTLAHPRLLSSTPQPLSKSMFNSPGLSLAL-------------QQPNIDNQ 80
           +NNNN P              P   +K  F SP LSL+L             +      +
Sbjct: 2   SNNNNPP--------------PTSHAKDFFASPALSLSLAGIFRHAGVAAADEAATSVEE 47

Query: 81  GGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR 140
           G    +L  +     G    RS ED  E E+    D+ DG    +           +YHR
Sbjct: 48  GEECERLDDISSENSGPTRSRS-EDDFEVEAEHEDDDADGDKNKNKKRK-------KYHR 99

Query: 141 HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           HT  QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSL
Sbjct: 100 HTADQIKEMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSL 159

Query: 201 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL--EEQHLRIENARLKDELDRVC 258
           L+ E +KL+ +N ++R+ +    C NCG P    D ++  EEQ LRIENA+LK E++++ 
Sbjct: 160 LKSEIEKLKEKNKTLRETINKACCPNCGVPTTSRDGAMPTEEQQLRIENAKLKAEVEKLR 219

Query: 259 ALAGKFL---GRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           A+ GK+      P  S G      SSL                       DF TGI    
Sbjct: 220 AVLGKYAPGSTSPSCSSGHDQENRSSL-----------------------DFYTGI---- 252

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                         GLD+S      ++    AM+EL+KMA   EPLW+RSFE +GR++LN
Sbjct: 253 -------------FGLDKS----RIMDTVNQAMEELIKMATVGEPLWLRSFE-TGREILN 294

Query: 376 HEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           ++EY+R F        KP   + EASR+T +V ++   LV++ +D N+W EMFPC+I++ 
Sbjct: 295 YDEYVREFAVENSSSGKPRRSI-EASRDTAVVFVDLPRLVQSFLDVNQWKEMFPCLISKA 353

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
           AT DVI +G G  RNGA+QLM AELQ+L+P+VP REV F+RFCKQ +   WA+VDVSID 
Sbjct: 354 ATVDVICNGEGPGRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDK 413

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
           + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S VH +Y+ ++ SG+ FG
Sbjct: 414 VEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFG 472

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           A+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 473 ARHWIATLQLQCERLVFFMATNVPMKDSTGV 503


>gi|302398859|gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/491 (45%), Positives = 301/491 (61%), Gaps = 56/491 (11%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           GR   ED  + E     D++DG      D  +   ++K+YHRHT +QI+E+E+LFKE PH
Sbjct: 77  GRSRSEDEFDGEGEHDEDDVDG------DNKNKKKKRKKYHRHTTEQIREMEALFKESPH 130

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR E+ ++R+ 
Sbjct: 131 PDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKGEMEKLRDESKAMREQ 190

Query: 219 MRNPICTNCGGPAIIGDISL--EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           +    C NCG      D +L  EEQ LRIENARLK E++++ A   K+         PP 
Sbjct: 191 INKACCPNCGTATTSRDATLTTEEQQLRIENARLKSEVEKLRAALVKY---------PPG 241

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
             + S   G    N          ++L  DF TGI                       +E
Sbjct: 242 TSSPSCSAGQDQEN---------RSSL--DFYTGIFG---------------------LE 269

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF-- 394
            S  +E+   AM+EL KMA   EPLW+RS E +GR++LN++EY++ F   I +  NG   
Sbjct: 270 ESRIMEIVNQAMEELQKMATAGEPLWVRSVE-TGREILNYDEYIKEFN--IEVPGNGRPK 326

Query: 395 -VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
              EASRETG+V ++   LV++ MD N+W EMFPCMI++ AT DVI++G G  RNGA+QL
Sbjct: 327 RSIEASRETGLVFVDLPRLVQSFMDVNQWKEMFPCMISKAATVDVINNGEGDDRNGAVQL 386

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M AELQ+L+PLVP REV F+R CKQ +   WA+VDVSID + +   A + V CR+ PSGC
Sbjct: 387 MFAELQMLTPLVPTREVYFVRCCKQLSPEQWAIVDVSIDKVEDNIDA-SLVKCRKRPSGC 445

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           +++D  NG+ KV WVEH E   S +  +Y+ ++ SG+ FGA+ WVATLQ QCE L   M+
Sbjct: 446 IIEDKTNGHCKVIWVEHLECQRSTIQTMYRTIVNSGLAFGARHWVATLQLQCERLVFFMA 505

Query: 574 TSVSARDHTGI 584
           T+V  +D  G+
Sbjct: 506 TNVPMKDSAGV 516


>gi|77378036|gb|ABA70759.1| baby boom interacting protein 1B [Brassica napus]
          Length = 711

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/467 (45%), Positives = 294/467 (62%), Gaps = 40/467 (8%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D ++   +KKRYHRHT QQIQ LES FKECPHPD+KQR +LS+ L L  RQ+KFWFQNRR
Sbjct: 23  DGSETDKKKKRYHRHTAQQIQRLESSFKECPHPDDKQRNQLSRELGLAPRQIKFWFQNRR 82

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQ+K Q ER +N+ L+ ENDK+R EN++IR+A+++ IC NCG P +  D   +E  LRIE
Sbjct: 83  TQLKAQHERADNNALKAENDKIRCENIAIREAIKHAICPNCGSPPVNEDPYFDEHKLRIE 142

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGPP--PMPNSSLELGV-GTINGFGGLSSTVTTTL 303
           NA L+D+L+R+  +A K++GRP+SS      P+  S L+L + G    F  L  +   + 
Sbjct: 143 NAHLRDDLERMSTVASKYMGRPISSHLSTLHPLHISPLDLSMTGPSLDFDLLPGSSMHSQ 202

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWI 363
           P +  T IS+                     +++ +  ++AL AM+EL+++  T+EPLW 
Sbjct: 203 PNNLAT-ISD---------------------MDKPLMNDIALTAMEELLRLFNTNEPLWT 240

Query: 364 RSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV-TEASRETGMVIINSLALVETLMDPNRW 422
           R     GR++L+   Y   F        N  V TEASR +G+V +N++ LV+  MD  +W
Sbjct: 241 RG--DGGREILDLGSYENLFPRSGNRGKNHNVRTEASRSSGIVFMNAMTLVDMFMDGVKW 298

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
            E+FPC++A + T  V+SSGMGGT  GAL LM+ E+ VLSPLV  RE   LR+C+   +G
Sbjct: 299 GELFPCIVASSKTLAVVSSGMGGTHEGALHLMYEEMAVLSPLVATREFCELRYCQMIEQG 358

Query: 483 VWAVVDVSIDTIRETSGAPAFV----NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-Q 537
            W VV+VS          P FV    +  + PSGC++QDMP+GYSKVTWVEH E +E  Q
Sbjct: 359 SWIVVNVSYHL-------PQFVSQSSHSYKFPSGCLIQDMPSGYSKVTWVEHVETEEKEQ 411

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            H+LY+ +I  G+ FGA+RWV TLQR CE  A L++ S S+RD  G+
Sbjct: 412 THELYREVIHKGIAFGAERWVTTLQRMCERFASLLAPSTSSRDLGGV 458


>gi|255549944|ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
 gi|223544928|gb|EEF46443.1| homeobox protein, putative [Ricinus communis]
          Length = 758

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/454 (46%), Positives = 281/454 (61%), Gaps = 55/454 (12%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 168

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL--EEQHLRIENARLKDELD 255
           NSLL+ E +KLR EN ++R+ +    C NCG      D SL  EEQ LRIENA+LK E++
Sbjct: 169 NSLLKTEMEKLRDENKAMRETINKACCPNCGTATTSRDTSLTTEEQQLRIENAKLKSEVE 228

Query: 256 RVCALAGKFL--GRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
           ++ A  GK+     P  S G      SSL                       DF TGI  
Sbjct: 229 KLRAALGKYPPGAAPSCSAGSEQENRSSL-----------------------DFYTGIFG 265

Query: 314 ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV 373
                                +E+S   E+A  AM+EL KMA   EPLWIRS E + R++
Sbjct: 266 ---------------------LEKSRITEIANQAMEELNKMATAGEPLWIRSVE-TDREI 303

Query: 374 LNHEEYLRTFT---PCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
           LN++EY++ F    P  G        E SRETG+V ++   LV++  D N W EMFPC+I
Sbjct: 304 LNYDEYIKEFNVENPSNGRSKKSI--EVSRETGVVFVDLPRLVQSFTDVNHWKEMFPCLI 361

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           ++ AT DVI +G G  R+GA+QLM AE+Q+L+P+VP REV F+R+CKQ +   WA+VDVS
Sbjct: 362 SKAATVDVICNGEGPNRDGAVQLMFAEVQMLTPMVPTREVYFVRYCKQLSAEQWAIVDVS 421

Query: 491 IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           ID + +   A + V CR+ PSGC+++D  NG+ KVTWVEH E  +S VH +Y+ ++ +G+
Sbjct: 422 IDNVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTIYRTIVNTGL 480

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            FGA+ WVATLQ QCE +   M+T+V  +D TG+
Sbjct: 481 AFGARHWVATLQLQCERIVFFMATNVPTKDSTGV 514


>gi|224073973|ref|XP_002304207.1| predicted protein [Populus trichocarpa]
 gi|222841639|gb|EEE79186.1| predicted protein [Populus trichocarpa]
          Length = 759

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/452 (46%), Positives = 283/452 (62%), Gaps = 50/452 (11%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 109 YHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 168

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL--EEQHLRIENARLKDELD 255
           NSLL+ E DKLR EN ++R+ +    C NCG        +L  EEQ LRIENA+LK E++
Sbjct: 169 NSLLKTEMDKLREENKTMRETINKACCPNCGTATTSRGTALTTEEQQLRIENAKLKAEVE 228

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++  + GK+         P    + S E      N     SS        DF TGI    
Sbjct: 229 KLRVVIGKY--------SPGATASCSAE------NDQENRSSL-------DFYTGI---- 263

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                         GLD++       E+A  AM+EL KMA   EPLWIRS E +GR++LN
Sbjct: 264 -------------FGLDKT----RITEIANQAMEELKKMATAGEPLWIRSVE-TGREILN 305

Query: 376 HEEYLRTF---TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIAR 432
           ++EY + F         +P   + EASRET +V ++   LV++ MD NRW EMFPC+I++
Sbjct: 306 YDEYTKEFGSENSSNNGRPKRSI-EASRETRVVFVDLPRLVQSFMDVNRWKEMFPCLISK 364

Query: 433 TATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID 492
            AT DVI +G G  RNGA+QLM AE+Q+L+P+VP REV F+R+CKQ     WA+VDVSID
Sbjct: 365 AATVDVICNGEGANRNGAVQLMFAEVQMLTPMVPTREVYFVRYCKQLNAEQWAIVDVSID 424

Query: 493 TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
            + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S VH +++ ++ SG+ F
Sbjct: 425 KVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHTMFRTVVHSGLAF 483

Query: 553 GAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           GA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 484 GARHWIATLQLQCERLVFFMATNVPTKDSTGV 515


>gi|42562138|ref|NP_564041.2| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
 gi|75264044|sp|Q9LMT8.1|HDG12_ARATH RecName: Full=Homeobox-leucine zipper protein HDG12; AltName:
           Full=HD-ZIP protein HDG12; AltName: Full=Homeodomain
           GLABRA 2-like protein 12; AltName: Full=Homeodomain
           transcription factor HDG12; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 12
 gi|9665069|gb|AAF97271.1|AC034106_14 Strong similarity to meristem L1 layer homeobox protein (ATML1)
           from Arabidopsis thaliana gb|U37589 and contains
           Transposase PF|01527, Homeobox PF|00046, and START
           PF|01852 domains. EST gb|AI995645 comes from this gene
           [Arabidopsis thaliana]
 gi|225897942|dbj|BAH30303.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191531|gb|AEE29652.1| homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana]
          Length = 687

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/471 (44%), Positives = 296/471 (62%), Gaps = 27/471 (5%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           D  + D  +      +KKR+HRHTP QIQ LES F EC HPDEKQR +LS+ L L  RQ+
Sbjct: 6   DSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQI 65

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQ K Q ER +N  L++ENDK+R EN++IR+A+++ IC +CG   +  D   
Sbjct: 66  KFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYF 125

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLS 296
           +EQ LRIENA+L+DEL+RV ++A KFLGRP+S + P   PM  S LEL            
Sbjct: 126 DEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLELF----------- 174

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQ 356
                +L  D   G  +++ V   P++    ++ +D    +S+   +A+ AM+EL+++ Q
Sbjct: 175 -HTGPSLDFDLLPGSCSSMSVPSLPSQPNLVLSEMD----KSLMTNIAVTAMEELLRLLQ 229

Query: 357 TDEPLWIRSFEGSGRQVLNHEEYLRTFT--PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           T+EPLWI++     R VLN E Y   FT     G K N    EASR +G+V  N++ LV+
Sbjct: 230 TNEPLWIKT--DGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVD 287

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
            LM+  +  E+FP ++A + T  VISSG+ G    AL LM  ELQVLSPLV  RE   LR
Sbjct: 288 MLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLR 347

Query: 475 FCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
           +C+Q   G WA+V+VS +  +  S + ++    R PSGC++QDM NGYSKVTWVEH E++
Sbjct: 348 YCQQIEHGTWAIVNVSYEFPQFISQSRSY----RFPSGCLIQDMSNGYSKVTWVEHGEFE 403

Query: 535 ESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           E + +H+++K ++  G+ FGA+RW+ATLQR CE    L+  + S+ D  G+
Sbjct: 404 EQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGV 454


>gi|357137911|ref|XP_003570542.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 713

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/477 (43%), Positives = 293/477 (61%), Gaps = 31/477 (6%)

Query: 123 GDDL------DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           GDDL      DAA    RKKRYHRHTP+QIQ+LE+ FKECPHPDE QR+ LS+ L LE R
Sbjct: 4   GDDLAVAAGSDAAVAQRRKKRYHRHTPRQIQQLEATFKECPHPDENQRMHLSRELGLEPR 63

Query: 177 QVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           Q+KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++R+A++N IC  CGGP    D 
Sbjct: 64  QIKFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPH-TNDD 122

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
             +E  LR+ENA LK+ELDRV +L  K+LGRP++      +P+S  +    +       +
Sbjct: 123 YFDEHKLRMENAHLKEELDRVSSLTSKYLGRPITQ-----LPSSMQQSLSMSSLDLSMGA 177

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQ 356
           +      P+     +S        P    P        +ER M  ++A  AMDEL+++AQ
Sbjct: 178 AAAAMGGPSLDLDLLSGGGSSSGMPAAFQPV-----SDMERPMMADMATRAMDELIRLAQ 232

Query: 357 TDEPLWIRSFE-GSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
             + +W ++   G  R+VL+ + Y   F    G +      E SR++ +V++ + ALV+ 
Sbjct: 233 AGDHVWAKADNGGCCREVLSVDAYDTVFGKPGGSRGPDVHVEGSRDSCLVLLPAHALVDI 292

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
            MD ++WA+ FP ++A+  T DV+ SGM G R+ +L LM  EL V++P+VP RE+ FLR+
Sbjct: 293 FMDSSKWADFFPTIVAKARTVDVLVSGMAG-RSESLVLMQEELHVMTPVVPTRELCFLRY 351

Query: 476 CKQHAEGVWAVVDVSIDTIRETS--------GAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           C+Q  +G+WAV DVS+D +++          GAP     R+LPSGC++ DM NGYSKVTW
Sbjct: 352 CRQIEQGLWAVADVSVDLLQQRDHAAASRYYGAPPQARARKLPSGCLIADMSNGYSKVTW 411

Query: 528 VEHAEYDESQ----VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VEH E  E      ++ LY+ L++SG  FGA RW+A LQR C+  A L++ S+  RD
Sbjct: 412 VEHMETTEGDNKNPINPLYRDLVLSGAAFGAHRWLAALQRACDRHACLVAASMPHRD 468


>gi|357454911|ref|XP_003597736.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
 gi|355486784|gb|AES67987.1| Homeobox-leucine zipper protein GLABRA [Medicago truncatula]
          Length = 794

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/451 (44%), Positives = 284/451 (62%), Gaps = 47/451 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 202

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI--IGDISLEEQHLRIENARLKDELD 255
           NSLL+ E +KLR +N ++R+ +    C NCG P     G ++ EEQ LRIENA+LK E++
Sbjct: 203 NSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLKAEVE 262

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           R+ A  GK+      +M P             T +    + S++      DF TGI    
Sbjct: 263 RLRAALGKYAS---GTMSP----------SCSTSHDQENIKSSL------DFYTGIF--- 300

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                              ++ S  +++   AM+EL+KMA   EP+W+RS E +GR++LN
Sbjct: 301 ------------------CLDESRIMDVVNQAMEELIKMATMGEPMWLRSLE-TGREILN 341

Query: 376 HEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           ++EY++ F        +P   + EASR+TG+V  +   +V+  +D N+W EMFPC+I++ 
Sbjct: 342 YDEYMKEFADENSDHGRPKRSI-EASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKA 400

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
           AT D I  G G  +NGA+QLM AELQ+L+P+VP REV F+R+CK+ +   WA+VDVSID 
Sbjct: 401 ATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKRLSGEKWAIVDVSIDK 460

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
           + E +   + V CR+ PSGC+++D  NG+ KV WVEH E  +S VH +Y+ ++ SG+ FG
Sbjct: 461 V-EDNIDKSLVKCRKRPSGCIIEDKSNGHCKVVWVEHLECQKSIVHSMYRTIVNSGLAFG 519

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           A+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 520 ARHWIATLQLQCERLVFFMATNVPMKDSTGV 550


>gi|224059096|ref|XP_002299713.1| predicted protein [Populus trichocarpa]
 gi|222846971|gb|EEE84518.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/453 (46%), Positives = 286/453 (63%), Gaps = 55/453 (12%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL----ERHE 197
           T +QI+E+E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K +     ERHE
Sbjct: 110 TAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKARTLAIQERHE 169

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL---EEQHLRIENARLKDEL 254
           NSLL+ E DKLR +N S+R+ +    C NCG      D +L   EEQ LRIENA+LK E+
Sbjct: 170 NSLLKSEMDKLREDNKSMRETINKACCPNCGTATTSRDAALTSTEEQQLRIENAKLKAEV 229

Query: 255 DRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNA 314
           +++ A+ GK      SS G              T +   G      ++L  DF TGI   
Sbjct: 230 EKLRAVVGK------SSPG-------------ATASCSAGNEQENRSSL--DFYTGI--- 265

Query: 315 LPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVL 374
                          GLD+S      +E A  AM+EL KMA   EPLWIRS E +GR++L
Sbjct: 266 --------------FGLDKS----RIMETANQAMEELKKMATAGEPLWIRSVE-TGREIL 306

Query: 375 NHEEYLRTF---TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           N++EY + F      I  +P   + EASRETG+V I+   LV++ MD ++W EMFPC+I+
Sbjct: 307 NYDEYTKVFGSEDSSINGRPKRSI-EASRETGVVFIDVPRLVQSFMDVDQWKEMFPCLIS 365

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
           + AT DVI +G G +RNGA+QLM AE+Q+L+P+VP REV F+R+CKQ     WA+VDVSI
Sbjct: 366 KAATVDVICNGEGASRNGAVQLMFAEVQMLTPMVPTREVYFVRYCKQLNAEQWAIVDVSI 425

Query: 492 DTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMG 551
           D + +   A + V CR+ PSGC+++D  NG+ KV WVEH +  +S VH +Y+ ++ SG+ 
Sbjct: 426 DKVEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLQCQKSTVHTMYRTVVHSGLT 484

Query: 552 FGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           FGA+ W+ATLQ QCE L   M+T+V  +D TG+
Sbjct: 485 FGARHWMATLQLQCERLVFFMATNVPTKDSTGV 517


>gi|356528926|ref|XP_003533048.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 748

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/451 (44%), Positives = 280/451 (62%), Gaps = 46/451 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LS++L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 96  YHRHTTEQIREMEALFKESPHPDEKQRQKLSQQLGLAPRQVKFWFQNRRTQIKALQERHE 155

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCG--GPAIIGDISLEEQHLRIENARLKDELD 255
           NSLL+ E DKLR E  ++R+ +    C NCG     I   +S EE+ L IENA+LK E++
Sbjct: 156 NSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVE 215

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++    GKF  R                                 TT P     G     
Sbjct: 216 KLRTALGKFSPR---------------------------------TTSPTTSSAGHDE-- 240

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                 NR+  G   +   +++S  +++A  A +EL+KMA   EPLW+RS E +GR++LN
Sbjct: 241 ----EENRNSLGFYSVLFGLDKSRIMDVANRATEELIKMATMGEPLWVRSVE-TGREILN 295

Query: 376 HEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           ++EY++          +P  F+ EASRET +V ++   L+++ +D N+W EMFPC+I++ 
Sbjct: 296 YDEYVKEMAAENSGSERPKTFI-EASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKA 354

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
            T DVIS+G G  RNGA+QLM AELQ+L+P+VP REV F+R CKQ ++  WA+VDVSID 
Sbjct: 355 VTVDVISNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDK 414

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
           + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S +H +Y+ ++ SG+ FG
Sbjct: 415 VEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFG 473

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           A+ W+ATLQ  CE L   M+T+V  +D TG+
Sbjct: 474 ARHWIATLQLHCERLVFYMATNVPMKDSTGV 504


>gi|356536039|ref|XP_003536548.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 751

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/463 (43%), Positives = 287/463 (61%), Gaps = 34/463 (7%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           SGD+    D   +++R+ RHT  QI E+E+ FKECPHPDEKQR  L + L L   Q+KFW
Sbjct: 62  SGDEDQDPDEGFKRRRHTRHTLHQISEMEAFFKECPHPDEKQRKALGRELGLVPLQIKFW 121

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQ 241
           FQN+RTQ+K+Q ER+EN+LLR ENDKLRAEN   R+A+ N  C NCG P  +G++S +EQ
Sbjct: 122 FQNKRTQVKSQQERYENNLLRVENDKLRAENSRYRNALSNTSCPNCGAPTTLGEMSFDEQ 181

Query: 242 HLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTT 301
            LR+ENAR K+E+D +  LA K+     +S     MP++  ++   ++            
Sbjct: 182 QLRMENARQKEEIDSMSGLAAKYAAGKSASNSYYNMPSNQNQMPSRSL------------ 229

Query: 302 TLPADFGTGISNALPVVM--------PPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
               D G   +N  PV M         P R  P ++  D    + +  E+ L A++E+ +
Sbjct: 230 ----DLGVVNNNTQPVAMVGEMYGGNDPLRELPLLSSFD----KDLISEIGLVAVEEINQ 281

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           +  + +PLW+    GS  +V+N +EYLR F   IG    G  TE+SR+T +V+++ + LV
Sbjct: 282 LTLSADPLWVPGNYGS--EVINEDEYLRHFPRGIGPTLLGARTESSRQTAIVMMHHMKLV 339

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           E LMD N+W+ MF  +++R  T +V+S G     +GA Q+M AE QV SPLVP R+  F+
Sbjct: 340 EMLMDVNQWSNMFCGIVSRAVTHEVLSIGDHARYDGAYQVMSAEFQVPSPLVPTRDNYFI 399

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           RF K+HA   WAVVD+S+D +R      A    RR PSGC++Q++PNGYSKV WVEH E 
Sbjct: 400 RFSKKHAGQSWAVVDISMDHLRPG----AVTRTRRRPSGCIIQELPNGYSKVIWVEHVEV 455

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           D+ +VH LYK L+ S + FGA+RW+A ++R CE LA  M+T++
Sbjct: 456 DDIEVHNLYKNLVNSTLAFGAKRWIAAIERTCEHLARAMATNI 498


>gi|356574388|ref|XP_003555330.1| PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like
           [Glycine max]
          Length = 729

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/482 (44%), Positives = 299/482 (62%), Gaps = 24/482 (4%)

Query: 101 RSREDLLEHESRSGSDNMDG-ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHP 159
           R+RE   E E  +    M+  ASGDD    +   +++R+ RHT  QI E+ES FK CPHP
Sbjct: 14  RNRE---EQEPSNKETTMEAPASGDDDQDLEEGFKRRRHTRHTHHQISEMESFFKGCPHP 70

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAM 219
           DEKQR  L + L LE  Q+KFWFQN+RTQ+KTQ ER+EN+LLR ENDKLRAEN   R+A+
Sbjct: 71  DEKQRKALGRELGLEPLQIKFWFQNKRTQVKTQQERYENNLLRVENDKLRAENRRYRNAL 130

Query: 220 RNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM-----GP 274
            N +C +CGGP  +G++S +EQ LRIENARLK+E+  +   A K  G+  S+        
Sbjct: 131 ANALCPSCGGPTALGEMSFDEQQLRIENARLKEEIASMSGPAAKHAGKSGSNSYCNMPSQ 190

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
             MP+ SL+LGVG  N      +       A  G       P+   P         L   
Sbjct: 191 NQMPSRSLDLGVGNNNKNNNFVAVAQAQPAAMVGEIYGGNDPLRELP---------LFSC 241

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
            ++++  E+ L A++E+ +++ + +PLW+    GS  +V+N +EYLR F   IG    G 
Sbjct: 242 FDKTLIGEIGLVAIEEINRLSLSGDPLWVPGNYGS--EVVNEDEYLRVFPRGIGPTLLGA 299

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
            TE+SR+T +VI++ + LVE LMD N+W+ MF  +++R  T +V+S+G     +GA Q+M
Sbjct: 300 RTESSRQTAIVIMHHMKLVEMLMDVNQWSNMFCGIVSRAVTHEVLSTGETIRYDGACQVM 359

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 514
            AE QV SPLVP R+  F+RFCK+H    WAVVD S+D +R      A    RR PSGC+
Sbjct: 360 SAEFQVPSPLVPTRDNYFIRFCKKHQGQSWAVVDFSMDHLRPG----AITKIRRRPSGCI 415

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           +Q++PNGYSKV WVEH E D+S+VH LYK L+ S + FGA+RWVA + R CE LA  M+T
Sbjct: 416 IQELPNGYSKVIWVEHVEVDDSEVHNLYKNLVDSTLAFGAKRWVAAIDRTCERLASAMAT 475

Query: 575 SV 576
           ++
Sbjct: 476 NI 477


>gi|356522256|ref|XP_003529763.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Glycine
           max]
          Length = 751

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/451 (45%), Positives = 281/451 (62%), Gaps = 45/451 (9%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+E+E+LFKE PHPDEKQR +LS +L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 97  YHRHTAEQIREMEALFKESPHPDEKQRQQLSNQLGLAPRQVKFWFQNRRTQIKAIQERHE 156

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCG--GPAIIGDISLEEQHLRIENARLKDELD 255
           NSLL+ E D+LR EN ++R+ +    C NCG     I   +S EE+ L IENA+LK E++
Sbjct: 157 NSLLKTELDRLREENKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVE 216

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           ++    GKF  R  S     P  +S+            G           DF  GI    
Sbjct: 217 KLRTALGKFSPRTTS-----PTTSSA------------GHHDEEENRSSLDFYNGI---- 255

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                         GLD+S      +++A  A +EL+KMA   EPLW+RS E +GR +LN
Sbjct: 256 -------------FGLDKS----RIMDIANRATEELIKMANMGEPLWVRSVE-TGRDILN 297

Query: 376 HEEYLRTFTP--CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIART 433
           ++EY++ F        +P  F+ EASRET +V ++   L+++ +D N+W EMFPC+I++ 
Sbjct: 298 YDEYVKEFEVENSGSERPKTFI-EASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKA 356

Query: 434 ATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT 493
           AT DVI +G G  RNGA+QLM AELQ+L+P+VP REV F+R  KQ ++  WA+VDVSID 
Sbjct: 357 ATVDVICNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCGKQLSDEQWAIVDVSIDK 416

Query: 494 IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFG 553
           + +   A + V CR+ PSGC+++D  NG+ KV WVEH E  +S +H +Y+ ++ SG+ FG
Sbjct: 417 VEDNIDA-SLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFG 475

Query: 554 AQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           A+ W+ TLQ QCE L   M+T+V  +D TG+
Sbjct: 476 ARHWIETLQLQCERLVFYMATNVPMKDSTGV 506


>gi|225466249|ref|XP_002268272.1| PREDICTED: homeobox-leucine zipper protein ROC8 [Vitis vinifera]
 gi|297738149|emb|CBI27350.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/487 (42%), Positives = 308/487 (63%), Gaps = 27/487 (5%)

Query: 110 ESRSGSDNMDGASGDDLDAADNPPR-KKRYHRHTPQQIQELESLFKECPHPDEKQRLELS 168
           E R+G +     SG D D   NP R +K Y+RHTPQQIQ LE+ FK+CPHPDE QR +L 
Sbjct: 2   EFRTGGN----GSGGDQDGP-NPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLG 56

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCG 228
           + L LE+RQ+KFWFQN+RTQ KTQ ER +N+ LR EN++++ EN++IR+A++N IC +CG
Sbjct: 57  RELGLESRQIKFWFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCG 116

Query: 229 GPAIIGDISLEE--QHLRIENARLKDELDRVCALAGKFLGRPVSSMG-PPPMPNSSLELG 285
           GP   G+   +   + L++ENA+LK+E ++V  L  K++G+P++ M   PP   SSL+  
Sbjct: 117 GPP-FGEEERQRNIEKLQLENAQLKEEHEKVSNLLAKYIGKPITQMHLLPPALGSSLDFS 175

Query: 286 VGTI--NGFGGLS-STVTTTLPADFG-TGISNALPVVMPPNRSGPGVTGLDRSIERSMFL 341
            G+      GGLS  TV   L  +     + NA   VM   +  P        +E+++  
Sbjct: 176 PGSFPSQETGGLSIPTVGPALGLELAPVDVCNA--SVMYQFKGFP-------DMEKTLMT 226

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRE 401
           E A  AMDEL+++ + +EPLW++S     + VL+H+ Y R F      K +    E+S+E
Sbjct: 227 ETAAGAMDELIRLVRINEPLWVKSATNE-KYVLHHDSYERIFPKATHFKSSNARIESSKE 285

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVL 461
           + +V +N + LV   +DPN++ ++FP ++ + +T  V+ +G+ G+R+G+LQLM+ ++ +L
Sbjct: 286 SVVVAMNGMQLVNMFLDPNKYVDLFPTIVTKASTIQVLEAGIIGSRSGSLQLMYEQMHIL 345

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNG 521
           SPLV  RE  FLR+C+Q   GVW +VDVS D  ++  G P  +   +LPSGC++QD+P+G
Sbjct: 346 SPLVAPREFYFLRYCQQIELGVWVMVDVSYDYSKD--GQPNSLRFWKLPSGCMIQDLPDG 403

Query: 522 YSKVTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
            SKVTWVEH E D+ S  H+LY+ L+   + FGA+R V TLQR CE LA L   +   RD
Sbjct: 404 CSKVTWVEHVEVDDKSLTHRLYRDLVSGSLAFGAERMVGTLQRMCERLAYLADENTPTRD 463

Query: 581 HTGIYDI 587
             G+  +
Sbjct: 464 LAGVISL 470


>gi|357124875|ref|XP_003564122.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 714

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/471 (43%), Positives = 284/471 (60%), Gaps = 26/471 (5%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           D   G D        R+KRYHRHTP+QIQ LE +FKECPHPDE QR +LS+ L LE RQ+
Sbjct: 6   DFPEGSDSHGQQQNNRRKRYHRHTPRQIQTLEGMFKECPHPDENQRAQLSRELGLEARQI 65

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQMK Q ER +N  LR ENDK+R EN+++ +A++N IC  CGGP  +G+   
Sbjct: 66  KFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMGEALKNVICPTCGGPP-VGEDFF 124

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVS----SMGPPPMPNSSLELGVGTIN---G 291
           +EQ LR+ENARLK+ELDRV ++A KFLGRP S      G PP+  +SL+L +G++     
Sbjct: 125 DEQKLRMENARLKEELDRVSSVASKFLGRPYSMSQMPHGTPPLSVNSLDLSMGSLGMGGQ 184

Query: 292 FGGLSSTVTTTLPADFGTGISNALP-VVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE 350
             G+        P D     S+ +P   MP   S          +ER +   +A  AMDE
Sbjct: 185 PLGVGGLGGGPTPQDLELLGSSEIPQFQMPAPVS---------EMERPVMAGIAARAMDE 235

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTP---CIGLKPNGFVTEASRETGMVII 407
           ++++A   E +WI+   G G + LN + Y   F         +      E +R    V +
Sbjct: 236 VIRLANAGEHVWIKVPGGDGYETLNVDTYDSLFGKPGSSSSFRAGDVRVEGTRHCAHVFM 295

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           ++  LVE  MD N+W E FP ++A   T D + +G+ G R+ +L LM+ E+ +L+PLV  
Sbjct: 296 SAAPLVEVFMDTNKWMEFFPSIVANARTVDNLVNGLDG-RSESLILMYEEMHMLTPLVQS 354

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRLPSGCVVQDMPNGYSKVT 526
           RE +FLR+C+Q  +G+WA+ DVS++T R+   G P+    RRLPSGC++ DM NGYSKVT
Sbjct: 355 REFSFLRYCRQIDQGLWAIADVSVETERDAQFGVPS--RSRRLPSGCLIADMANGYSKVT 412

Query: 527 WVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           WVEH E  D+  +  LY+ ++ SG GFGAQRW+  L   C+    L + +V
Sbjct: 413 WVEHMEIEDKGPIGVLYRDMVTSGAGFGAQRWLGALSNACDRYGALAALAV 463


>gi|334188232|ref|NP_199499.3| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
 gi|322510124|sp|Q9FJS2.3|HDG5_ARATH RecName: Full=Homeobox-leucine zipper protein HDG5; AltName:
           Full=HD-ZIP protein HDG5; AltName: Full=Homeodomain
           GLABRA 2-like protein 5; AltName: Full=Homeodomain
           transcription factor HDG5; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 5
 gi|332008060|gb|AED95443.1| homeobox-leucine zipper protein HDG5 [Arabidopsis thaliana]
          Length = 826

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/465 (45%), Positives = 288/465 (61%), Gaps = 27/465 (5%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P +KKRYHRHT +QIQE+E+LFKE PHPD+KQR  LS  L L+ RQVKFWFQNRRTQMK 
Sbjct: 109 PAKKKRYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKA 168

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
           Q +R+EN +LR END L++EN  ++  +R   C +CGGP ++GDI   E H  IEN RL+
Sbjct: 169 QQDRNENVMLRAENDNLKSENCHLQAELRCLSCPSCGGPTVLGDIPFNEIH--IENCRLR 226

Query: 252 DELDRVCALAGKFLGRPVSSMGP--------PPMPNS--SLELGVGTING-FGGLSSTVT 300
           +ELDR+C +A ++ GRP+ SM P        P +P+   SLEL +    G F   S T  
Sbjct: 227 EELDRLCCIASRYTGRPMQSMPPSQPLINPSPMLPHHQPSLELDMSVYAGNFPEQSCTDM 286

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             LP       +   P     N +   +   D   E+ + +E A++ + EL KM  T+EP
Sbjct: 287 MMLPPQ---DTACFFPDQTANNNNNNNMLLADE--EKVIAMEFAVSCVQELTKMCDTEEP 341

Query: 361 LWIRSFE---GSGRQVLNHEEYLRTFTPCIGLKPN--GFVTEASRETGMVIINSLALVET 415
           LWI+      G     LN EEY+R F   +  + N   F+ EAS+   +VI+NS+ LV+ 
Sbjct: 342 LWIKKKSDKIGGEILCLNEEEYMRLFPWPMENQNNKGDFLREASKANAVVIMNSITLVDA 401

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
            ++ ++W+EMF  ++AR  T  +ISSG+ G     L LM AELQVLSPLVP RE  FLR+
Sbjct: 402 FLNADKWSEMFCSIVARAKTVQIISSGVSGASGSLL-LMFAELQVLSPLVPTREAYFLRY 460

Query: 476 CKQHAE-GVWAVVDVSIDTIRETSGAPAFVN--CRRLPSGCVVQDMPNGYSKVTWVEHAE 532
            +Q+AE G WA+VD  ID+  +       +    +R PSGC++QDMPNGYS+V WVEH E
Sbjct: 461 VEQNAETGNWAIVDFPIDSFHDQMQPMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVE 520

Query: 533 YDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            DE  VH+ +   + SGM FGA RW+  LQRQCE +A LM+ +++
Sbjct: 521 VDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIASLMARNIT 565


>gi|449445947|ref|XP_004140733.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Cucumis
           sativus]
          Length = 706

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/452 (42%), Positives = 294/452 (65%), Gaps = 21/452 (4%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           S D+ +A+++   KK YHRH P QIQ+LES F++CPHPDE QR +LS+ L LET+Q+KFW
Sbjct: 11  SPDEQEASNDRKGKKTYHRHNPYQIQQLESFFRQCPHPDENQRRQLSRELGLETKQIKFW 70

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE- 240
           FQN+RTQ K Q ER +NS LR EN+K++ EN++IR+A+RN IC +CGGP   G+   +  
Sbjct: 71  FQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPP-FGEEERQRN 129

Query: 241 -QHLRIENARLKDELDRVCALAGKFLGRPVSSM-GPPPMPNSSLELGVGTINGFGGLSST 298
            Q LR+EN+ LK+E ++V  L  K++G+P+S +    P+  SSL+L            S+
Sbjct: 130 LQKLRLENSHLKEEHEKVSNLLAKYIGKPISQLESLLPVLGSSLDLSP---------RSS 180

Query: 299 VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTD 358
           +T  +P+     IS+  PV++    +     G++  +E ++ LE A   ++EL+++ + D
Sbjct: 181 LTQIVPSPAVDLISD--PVILDGAATPYQSRGIN-DLENALMLETAATGLEELIRLLRID 237

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           EPLW++S    GR VL+ + Y + F      K +   TE+S+  G+V ++++ LV+  +D
Sbjct: 238 EPLWMKSL-NDGRYVLHRDSYEKIFPRPNHFKTSSARTESSKALGVVTMSAIQLVDFFLD 296

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
            ++WA++FP +I    T  +I  GM G R+GALQLM+ ++ + SPLV  R+  FLR C+Q
Sbjct: 297 ADKWADLFPTIITNAETFHIIDPGMPGNRSGALQLMYQQMHIFSPLVSPRDFCFLRHCQQ 356

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDE-SQ 537
              GVW +VDVS + +++   +     C RLPSGC++Q+MPNG SKVTWVEH E D+ +Q
Sbjct: 357 IEFGVWVIVDVSYEILKDCVTS---ARCWRLPSGCLIQEMPNGCSKVTWVEHVEVDDKTQ 413

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
            H+LY+ L+ + + +GA RW+ TLQR CE LA
Sbjct: 414 THRLYRDLVFNTLAYGADRWLFTLQRMCERLA 445


>gi|186504743|ref|NP_180796.2| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
 gi|187471166|sp|Q9ZV65.2|HDG3_ARATH RecName: Full=Homeobox-leucine zipper protein HDG3; AltName:
           Full=HD-ZIP protein HDG3; AltName: Full=Homeodomain
           GLABRA 2-like protein 3; AltName: Full=Homeodomain
           transcription factor HDG3; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 3; AltName: Full=Protein UPCURVED
           LEAF 1
 gi|151579839|gb|ABS18315.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|330253580|gb|AEC08674.1| homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
          Length = 725

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/456 (45%), Positives = 276/456 (60%), Gaps = 42/456 (9%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           +KK+Y+RHT  QI E+E+ F+ECPHPD+KQR +LS +L L+  Q+KFWFQN+RTQ K Q 
Sbjct: 68  KKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQ 127

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER ENS LR  N+ LR+EN  +R+A+   +C  CGG   IG+++ EE HLRI NARL +E
Sbjct: 128 ERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEE 187

Query: 254 LDRVCALAGK---FLGRPVSSMG--PPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
           + ++   A K     G PV S     PP P  + E G+G+    G  S    TT PAD  
Sbjct: 188 IKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSR--ETTGPAD-- 243

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG 368
              +N  P++M                      ELA  AM+EL+ MAQ  EPLW+  F G
Sbjct: 244 ---ANTKPIIM----------------------ELAFGAMEELLVMAQVAEPLWMGGFNG 278

Query: 369 SGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPC 428
           +    LN +EY +TF   +G +  GF TEASRET +V +    +VE LM  N W+ MF  
Sbjct: 279 TSL-ALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQENLWSTMFAG 337

Query: 429 MIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 488
           ++ R  T + I +   G  NG LQ+M AE QVLSPLV  RE  F+R+CKQ  EG+WAVVD
Sbjct: 338 IVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVD 397

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIIS 548
           +SID +         + CRR PSGC++Q+M +GYSKVTWVEH E D++  + +++ LI +
Sbjct: 398 ISIDHLLPNIN----LKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICT 453

Query: 549 GMGFGAQRWVATLQRQCECLAILMST---SVSARDH 581
           G  F A RWV TL RQCE ++ ++ST   SV + DH
Sbjct: 454 GQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDH 489


>gi|3831459|gb|AAC69941.1| putative homeodomain transcription factor [Arabidopsis thaliana]
          Length = 721

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/452 (44%), Positives = 273/452 (60%), Gaps = 39/452 (8%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           +KK+Y+RHT  QI E+E+ F+ECPHPD+KQR +LS +L L+  Q+KFWFQN+RTQ K Q 
Sbjct: 68  KKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQ 127

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER ENS LR  N+ LR+EN  +R+A+   +C  CGG   IG+++ EE HLRI NARL +E
Sbjct: 128 ERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEE 187

Query: 254 LDRVCALAGK---FLGRPVSSMG--PPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
           + ++   A K     G PV S     PP P  + E G+G+    G  S    TT PAD  
Sbjct: 188 IKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSR--ETTGPAD-- 243

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG 368
              +N  P++M                      ELA  AM+EL+ MAQ  EPLW+  F G
Sbjct: 244 ---ANTKPIIM----------------------ELAFGAMEELLVMAQVAEPLWMGGFNG 278

Query: 369 SGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPC 428
           +    LN +EY +TF   +G +  GF TEASRET +V +    +VE LM  N W+ MF  
Sbjct: 279 TSL-ALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQENLWSTMFAG 337

Query: 429 MIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 488
           ++ R  T + I +   G  NG LQ+M AE QVLSPLV  RE  F+R+CKQ  EG+WAVVD
Sbjct: 338 IVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVD 397

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIIS 548
           +SID +         + CRR PSGC++Q+M +GYSKVTWVEH E D++  + +++ LI +
Sbjct: 398 ISIDHLLPNIN----LKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICT 453

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           G  F A RWV TL RQCE ++ ++ST   + D
Sbjct: 454 GQAFAANRWVGTLVRQCERISSILSTDFQSVD 485


>gi|18266646|gb|AAL67592.1|AC018929_14 putative outer cell layer homeo domain protein [Oryza sativa
           Japonica Group]
 gi|125575788|gb|EAZ17072.1| hypothetical protein OsJ_32569 [Oryza sativa Japonica Group]
          Length = 866

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 289/474 (60%), Gaps = 34/474 (7%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRT
Sbjct: 112 AAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRT 171

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q +R +N +LR EN+ L+++N  ++ A+RN +C NCG  A++ D+S EEQ LRIEN
Sbjct: 172 QMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIEN 231

Query: 248 ARLKDELDRVCALAGKFLG----RPVSSM-------GPPPMPNSSLELGVGTINGFGGLS 296
           ARLKDELDR+  +A ++ G    +PV S         PPP+    L+L +   +      
Sbjct: 232 ARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQ 291

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVK 353
           + V        G G     PVV   + +   +  +   ++   + + ++LA  A D+L +
Sbjct: 292 APV-------MGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 344

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKP--NGFV--TEASRETGMVIIN 408
           M +  EPLW+R     G +V+  EE+ R F+ P  G K    G V   E +R+  +VI+N
Sbjct: 345 MCRAGEPLWVRQ---RGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMN 401

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVP 466
           S+ LV+  +D N+W E+FP ++ +  T  +I+ G   G   +G L LM AE+Q LSPLV 
Sbjct: 402 SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVA 461

Query: 467 VREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
            REV F R+C  +A EG WA+VD   +   E     + V CRR PSGC++QDMPNGYS+V
Sbjct: 462 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 521

Query: 526 TWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            WVEH E   +E  +  +++  + SG  FGA RW++ LQRQCE LA  ++ +++
Sbjct: 522 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA 575


>gi|115483622|ref|NP_001065481.1| Os10g0575600 [Oryza sativa Japonica Group]
 gi|122248972|sp|Q336P2.1|ROC3_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABRA 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
 gi|78709045|gb|ABB48020.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|78709046|gb|ABB48021.1| OCL4 protein, putative, expressed [Oryza sativa Japonica Group]
 gi|113640013|dbj|BAF27318.1| Os10g0575600 [Oryza sativa Japonica Group]
          Length = 882

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 289/474 (60%), Gaps = 34/474 (7%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRT
Sbjct: 128 AAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRT 187

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q +R +N +LR EN+ L+++N  ++ A+RN +C NCG  A++ D+S EEQ LRIEN
Sbjct: 188 QMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIEN 247

Query: 248 ARLKDELDRVCALAGKFLG----RPVSSM-------GPPPMPNSSLELGVGTINGFGGLS 296
           ARLKDELDR+  +A ++ G    +PV S         PPP+    L+L +   +      
Sbjct: 248 ARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQ 307

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVK 353
           + V        G G     PVV   + +   +  +   ++   + + ++LA  A D+L +
Sbjct: 308 APV-------MGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 360

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKP--NGFV--TEASRETGMVIIN 408
           M +  EPLW+R     G +V+  EE+ R F+ P  G K    G V   E +R+  +VI+N
Sbjct: 361 MCRAGEPLWVRQ---RGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMN 417

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVP 466
           S+ LV+  +D N+W E+FP ++ +  T  +I+ G   G   +G L LM AE+Q LSPLV 
Sbjct: 418 SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVA 477

Query: 467 VREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
            REV F R+C  +A EG WA+VD   +   E     + V CRR PSGC++QDMPNGYS+V
Sbjct: 478 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 537

Query: 526 TWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            WVEH E   +E  +  +++  + SG  FGA RW++ LQRQCE LA  ++ +++
Sbjct: 538 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA 591


>gi|187611428|sp|A2ZAI7.2|ROC3_ORYSI RecName: Full=Homeobox-leucine zipper protein ROC3; AltName:
           Full=GLABR 2-like homeobox protein 3; AltName:
           Full=HD-ZIP protein ROC3; AltName: Full=Homeodomain
           transcription factor ROC3; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 3
          Length = 882

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 289/474 (60%), Gaps = 34/474 (7%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRT
Sbjct: 128 AAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRT 187

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q +R +N +LR EN+ L+++N  ++ A+RN +C NCG  A++ D+S EEQ LRIEN
Sbjct: 188 QMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIEN 247

Query: 248 ARLKDELDRVCALAGKFLG----RPVSSM-------GPPPMPNSSLELGVGTINGFGGLS 296
           ARLKDELDR+  +A ++ G    +PV S         PPP+    L+L +   +      
Sbjct: 248 ARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQ 307

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVK 353
           + V        G G     PVV   + +   +  +   ++   + + ++LA  A D+L +
Sbjct: 308 APV-------MGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 360

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKP--NGFV--TEASRETGMVIIN 408
           M +  EPLW+R     G +V+  EE+ R F+ P  G K    G V   E +R+  +VI+N
Sbjct: 361 MCRAGEPLWVRQ---RGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMN 417

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVP 466
           S+ LV+  +D N+W E+FP ++ +  T  +I+ G   G   +G L LM AE+Q LSPLV 
Sbjct: 418 SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVA 477

Query: 467 VREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
            REV F R+C  +A EG WA+VD   +   E     + V CRR PSGC++QDMPNGYS+V
Sbjct: 478 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 537

Query: 526 TWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            WVEH E   +E  +  +++  + SG  FGA RW++ LQRQCE LA  ++ +++
Sbjct: 538 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA 591


>gi|125533056|gb|EAY79621.1| hypothetical protein OsI_34765 [Oryza sativa Indica Group]
          Length = 866

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 289/474 (60%), Gaps = 34/474 (7%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRT
Sbjct: 112 AAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRT 171

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q +R +N +LR EN+ L+++N  ++ A+RN +C NCG  A++ D+S EEQ LRIEN
Sbjct: 172 QMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIEN 231

Query: 248 ARLKDELDRVCALAGKFLG----RPVSSM-------GPPPMPNSSLELGVGTINGFGGLS 296
           ARLKDELDR+  +A ++ G    +PV S         PPP+    L+L +   +      
Sbjct: 232 ARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQ 291

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVK 353
           + V        G G     PVV   + +   +  +   ++   + + ++LA  A D+L +
Sbjct: 292 APV-------MGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 344

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKP--NGFV--TEASRETGMVIIN 408
           M +  EPLW+R     G +V+  EE+ R F+ P  G K    G V   E +R+  +VI+N
Sbjct: 345 MCRAGEPLWVRQ---RGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMN 401

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVP 466
           S+ LV+  +D N+W E+FP ++ +  T  +I+ G   G   +G L LM AE+Q LSPLV 
Sbjct: 402 SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVA 461

Query: 467 VREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
            REV F R+C  +A EG WA+VD   +   E     + V CRR PSGC++QDMPNGYS+V
Sbjct: 462 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 521

Query: 526 TWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            WVEH E   +E  +  +++  + SG  FGA RW++ LQRQCE LA  ++ +++
Sbjct: 522 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA 575


>gi|31339099|dbj|BAC77156.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 879

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/474 (42%), Positives = 289/474 (60%), Gaps = 34/474 (7%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRT
Sbjct: 125 AAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRT 184

Query: 188 QMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIEN 247
           QMK Q +R +N +LR EN+ L+++N  ++ A+RN +C NCG  A++ D+S EEQ LRIEN
Sbjct: 185 QMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIEN 244

Query: 248 ARLKDELDRVCALAGKFLG----RPVSSM-------GPPPMPNSSLELGVGTINGFGGLS 296
           ARLKDELDR+  +A ++ G    +PV S         PPP+    L+L +   +      
Sbjct: 245 ARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQ 304

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVK 353
           + V        G G     PVV   + +   +  +   ++   + + ++LA  A D+L +
Sbjct: 305 APV-------MGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR 357

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLKP--NGFV--TEASRETGMVIIN 408
           M +  EPLW+R     G +V+  EE+ R F+ P  G K    G V   E +R+  +VI+N
Sbjct: 358 MCRAGEPLWVRQ---RGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMN 414

Query: 409 SLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVP 466
           S+ LV+  +D N+W E+FP ++ +  T  +I+ G   G   +G L LM AE+Q LSPLV 
Sbjct: 415 SINLVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVA 474

Query: 467 VREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
            REV F R+C  +A EG WA+VD   +   E     + V CRR PSGC++QDMPNGYS+V
Sbjct: 475 AREVVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRV 534

Query: 526 TWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            WVEH E   +E  +  +++  + SG  FGA RW++ LQRQCE LA  ++ +++
Sbjct: 535 VWVEHMEMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIA 588


>gi|242034971|ref|XP_002464880.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
 gi|241918734|gb|EER91878.1| hypothetical protein SORBIDRAFT_01g028160 [Sorghum bicolor]
          Length = 827

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/483 (42%), Positives = 288/483 (59%), Gaps = 53/483 (10%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRTQMK Q 
Sbjct: 85  KKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQ 144

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           +R +N LLR EN+ L+++N  ++ A+RN +C NCG  A++G++S EEQ LRIENARLKDE
Sbjct: 145 DRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDE 204

Query: 254 LDRVCALAGKFLGRPVSSM--------GPPP--MPNSSLELGVGTINGFGGLSSTVTTTL 303
           LDR+  +A ++ G    SM         PPP  MP   L++ V     F   SS +    
Sbjct: 205 LDRLACIATRYGGGRQPSMSSALGCLSAPPPVLMPPLDLDMNV-YARHFTDQSSVM---- 259

Query: 304 PADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE------------- 350
                 G  + +  V+ P +  P V G +     S F+  A+  + E             
Sbjct: 260 ------GCGDLIQSVLAPQQQIP-VGGAEHHATSS-FMGAAIGPVQEQDRQLVLDLAATA 311

Query: 351 ---LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV-------TEASR 400
              L KM +  EPLW+R   G+  +V+  +E+ R F+  +     G         TE SR
Sbjct: 312 ADTLAKMCRAGEPLWLRR-RGASSEVMVADEHARMFSWPVDGGQQGSASTGAAARTEGSR 370

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAEL 458
           ++ +VI+NS+ LV+  +D N+W E+FP ++++  T  VI+ G   G   +G+L LM AE+
Sbjct: 371 DSAVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQVINHGARSGHMGSGSLLLMQAEV 430

Query: 459 QVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQ 516
           Q  SPLVP REV F R+C  +  EG W+VVD   D  + E     + V C R PSGC++Q
Sbjct: 431 QFPSPLVPAREVVFFRYCMHNGDEGTWSVVDFPADGFQLEGLQTSSVVKCCRRPSGCIIQ 490

Query: 517 DMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           DMPNGYS V WVEH E   +E  +HQ++K  + SG  FGA RWV+ LQRQCE LA  ++ 
Sbjct: 491 DMPNGYSSVVWVEHMEMVGEEKPLHQVFKDYVASGYAFGATRWVSLLQRQCERLASELAR 550

Query: 575 SVS 577
           +++
Sbjct: 551 NIA 553


>gi|449466649|ref|XP_004151038.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 777

 Score =  368 bits (945), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 220/560 (39%), Positives = 312/560 (55%), Gaps = 76/560 (13%)

Query: 55  PQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIG--RRSREDLLEHE-- 110
           P   +K  F+SP LSL L    I  +   ++    M E  +G +G  RR   D +  E  
Sbjct: 14  PLAFTKDFFSSPALSLTL--AGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVS 71

Query: 111 ---------SRSGSDNMDGAS----GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECP 157
                    SRS  +   G       + +D      R+K+YHRHT +QI+E+E+LFKE P
Sbjct: 72  SENSGPVVRSRSEEEEEGGGQDDQENELVDHGCQLKRRKKYHRHTTEQIREMEALFKESP 131

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           HPDEKQR +LSKRL L  RQVKFWFQNRRTQ+K   ERHEN+LL+ E +KLR EN ++R+
Sbjct: 132 HPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENKAMRE 191

Query: 218 AMRNPI-CTNCGGPAIIGD--ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
             +  I C NCG      D  +    + LRI+NA+LK E++++ A  GK+   P ++  P
Sbjct: 192 ISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAKLKAEVEKLRAALGKY---PQAAASP 248

Query: 275 PPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
               +              G     +  +  DF TGI                       
Sbjct: 249 STYSS--------------GNEQETSNRICLDFYTGIFG--------------------- 273

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT---------P 385
           +E S  +E    A++EL  MA   +PLW+RS E +GR++LN++EYL+TF           
Sbjct: 274 LENSRIMEKVDEAVEELKTMAAAGDPLWVRSVE-TGREILNYDEYLKTFQFSNNNSNTRN 332

Query: 386 CIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGG 445
           C+         EASRET +V +    LV++ MD N+W EMFP MI++ AT DVI +G   
Sbjct: 333 CLKTH-----IEASRETALVFMEPSRLVQSFMDENQWKEMFPFMISKAATVDVICNGEAA 387

Query: 446 T-RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFV 504
              NGA+QLM AE+Q+L+PLVP RE+ F+R CKQ     WA+VDVSI+ + + +   + V
Sbjct: 388 KWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQLDAEQWAIVDVSIENVEDNNIDVSLV 447

Query: 505 NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
             R+ PSGC+++D  NG+ KVT VEH E  +++VH LY+ ++ +G  FGA+ W+ATLQ Q
Sbjct: 448 KYRKRPSGCIIKDESNGHCKVTMVEHLECVKNKVHNLYRSIVNNGTAFGARHWMATLQLQ 507

Query: 565 CECLAILMSTSVSARDHTGI 584
           CE  A  M+T++  +D TG+
Sbjct: 508 CERSAFFMATNIPMKDSTGV 527


>gi|357147560|ref|XP_003574393.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Brachypodium
           distachyon]
          Length = 888

 Score =  365 bits (937), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 211/556 (37%), Positives = 302/556 (54%), Gaps = 97/556 (17%)

Query: 105 DLLEHESRSGSDNMDGA---SGDDLDAADNPP------------------RKKRYHRHTP 143
           D+ E    SGS ++DG      DD     N P                  +KKRYHRHT 
Sbjct: 75  DMAELSGGSGSAHLDGLLAFDDDDHKPHHNEPNMASTGAANNGNNAANGGKKKRYHRHTA 134

Query: 144 QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQ 203
            QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRTQMK Q +R +N +LR 
Sbjct: 135 HQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRA 194

Query: 204 ENDKLRAENMSIRDAMRNPICTNCGGP-AIIGDISLEEQHLRIENARLKDELDRVCALAG 262
           EN+ L+ +N  ++ A+RN +C  CG P A++ D+  EEQ LR+ENARLKDELDR+ ++A 
Sbjct: 195 ENESLKTDNFRLQAALRNVVCPTCGHPGAVLADVPYEEQTLRVENARLKDELDRLASIAT 254

Query: 263 KF----------------LGRPVSSMGPPPMPNSSLELGVGTI---------NGFGGLSS 297
           ++                LG   +   P  MP   L+L +            +G G ++ 
Sbjct: 255 RYGGGRQQQQPGGGMSSLLGCMSAMSAPMLMPPQQLDLDMSVYSRHFADHQQHGGGAMAD 314

Query: 298 T-VTTTLP----ADFGTGISNALPVVMPPNRSGPGVTGLDRSI--------ERSMFLELA 344
             + T++P    AD G                 PGV+ +   +        +R + L+LA
Sbjct: 315 HHLMTSVPQLQMADHG--------------HQHPGVSAVSSYMAPVVVQEQDRQLVLDLA 360

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCI------------GLKP 391
             A + L +M +  +PLW R   G+  +V++  E+ R F+ P +                
Sbjct: 361 ATAAEHLARMCRAGDPLWARRVAGASGEVMDAAEHARVFSWPVVDAGNKQQQQGDLAAAS 420

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTRNG 449
               TE +R+  +VI+NS+ LV+  +D N+W E+FP ++++  T  VI +G   G   +G
Sbjct: 421 AALRTEGTRDGAVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQVIHNGAASGHLASG 480

Query: 450 ALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIRETSG-----APAF 503
           +L LM AE+Q LSPLVP REV F R+C  +A EG W++VD   D  ++          A 
Sbjct: 481 SLILMQAEVQFLSPLVPAREVVFFRYCVHNADEGSWSIVDFPADGFQDDLLQQQQQTSAV 540

Query: 504 VNCRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATL 561
           V CRR PSGC++QD PNGYS+V WVEH E   DE  +  ++K  +  G  FGA RWVA L
Sbjct: 541 VRCRRRPSGCIIQDAPNGYSRVVWVEHMEVVGDEKPLQPVFKDHVAGGAAFGATRWVAVL 600

Query: 562 QRQCECLAILMSTSVS 577
           QRQCE LA  ++ +++
Sbjct: 601 QRQCERLASELARNIA 616


>gi|190349989|emb|CAQ63375.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 881

 Score =  364 bits (934), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 214/494 (43%), Positives = 295/494 (59%), Gaps = 46/494 (9%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           A+G     A    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKF
Sbjct: 126 AAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 185

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMK Q +R +N LLR EN+ L+++N  ++ A+RN +C NCG  A++G++S EE
Sbjct: 186 WFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEE 245

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSM---------GPPP--MPNSSLELGVGT- 288
           Q LRIENARLKDELDR+  +A ++ G    SM          PPP  MP   L++ V + 
Sbjct: 246 QQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPPLDLDMNVYSR 305

Query: 289 -------INGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RS 338
                  + G G L  +V          G  +        + S P   G    ++   R 
Sbjct: 306 HFTDQSPVMGCGDLIQSVLGPPSQQITGGAEH--------HASTPSFMGAMAPVQEQDRQ 357

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIG------LKP 391
           + L+LA AA D L KM +  E LW+R   G+  +V+  +E+ R F+ P  G        P
Sbjct: 358 LVLDLAAAAADTLAKMCRAGESLWLRR-RGASSEVMVADEHARMFSWPVNGGQQDSSASP 416

Query: 392 NGFV--TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG--MGGTR 447
            G    TE SR+  +VI+NS+ LV+  +D N+W E+FP ++++  T  VI+ G   G   
Sbjct: 417 GGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGHMG 476

Query: 448 NGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVN 505
           +G+L LM AELQ  SPLVP REV F R+C  +  EG W++VD   +  + E    P+ V 
Sbjct: 477 SGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSVVR 536

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           C R PSGC++QDMPNGYS V WVEH E   +E  +HQ++K  + SG  FGA RWV+ LQR
Sbjct: 537 CCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQR 596

Query: 564 QCECLAILMSTSVS 577
           QCE LA  ++ +++
Sbjct: 597 QCERLASELARNIA 610


>gi|190349991|emb|CAQ63376.1| putative HD-ZIP IV family transcription factor OCL4 [Zea mays]
          Length = 884

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 214/494 (43%), Positives = 295/494 (59%), Gaps = 46/494 (9%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           A+G     A    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKF
Sbjct: 126 AAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 185

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMK Q +R +N LLR EN+ L+++N  ++ A+RN +C NCG  A++G++S EE
Sbjct: 186 WFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEE 245

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSM---------GPPP--MPNSSLELGVGT- 288
           Q LRIENARLKDELDR+  +A ++ G    SM          PPP  MP   L++ V + 
Sbjct: 246 QQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPPLDLDMNVYSR 305

Query: 289 -------INGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RS 338
                  + G G L  +V          G  +        + S P   G    ++   R 
Sbjct: 306 HFTDQSPVMGCGDLIQSVLGPPSQQITGGAEH--------HASTPSFMGAMAPVQEQDRQ 357

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIG------LKP 391
           + L+LA AA D L KM +  E LW+R   G+  +V+  +E+ R F+ P  G        P
Sbjct: 358 LVLDLAAAAADTLAKMCRAGESLWLRR-RGASSEVMVADEHARMFSWPVNGGQQDSSASP 416

Query: 392 NGFV--TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG--MGGTR 447
            G    TE SR+  +VI+NS+ LV+  +D N+W E+FP ++++  T  VI+ G   G   
Sbjct: 417 GGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGHMG 476

Query: 448 NGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVN 505
           +G+L LM AELQ  SPLVP REV F R+C  +  EG W++VD   +  + E    P+ V 
Sbjct: 477 SGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSVVR 536

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           C R PSGC++QDMPNGYS V WVEH E   +E  +HQ++K  + SG  FGA RWV+ LQR
Sbjct: 537 CCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQR 596

Query: 564 QCECLAILMSTSVS 577
           QCE LA  ++ +++
Sbjct: 597 QCERLASELARNIA 610


>gi|162462576|ref|NP_001105126.1| OCL4 protein [Zea mays]
 gi|37051038|emb|CAB96424.2| OCL4 protein [Zea mays]
          Length = 808

 Score =  363 bits (933), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 214/493 (43%), Positives = 295/493 (59%), Gaps = 44/493 (8%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           A+G     A    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKF
Sbjct: 50  AAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 109

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMK Q +R +N LLR EN+ L+++N  ++ A+RN +C NCG  A++G++S EE
Sbjct: 110 WFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEE 169

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSM---------GPPP--MPNSSLELGVGT- 288
           Q LRIENARLKDELDR+  +A ++ G    SM          PPP  MP   L++ V + 
Sbjct: 170 QQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPPLDLDMNVYSR 229

Query: 289 -------INGFGGLSSTVTTTLPADFGTGISN--ALPVVMPPNRSGPGVTGLDRSIERSM 339
                  + G G L  +V          G  +  + P  M       G     +  +R +
Sbjct: 230 HFTDQSPVMGCGDLIQSVLGPPSQQITGGAEHHASTPSFM-------GAMAPVQEQDRQL 282

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIG------LKPN 392
            L+LA AA D L KM +  E LW+R   G+  +V+  +E+ R F+ P  G        P 
Sbjct: 283 VLDLAAAAADTLAKMCRAGESLWLRR-RGASSEVMVADEHARMFSWPVNGGQQDSSASPG 341

Query: 393 GFV--TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG--MGGTRN 448
           G    TE SR+  +VI+NS+ LV+  +D N+W E+FP ++++  T  VI+ G   G   +
Sbjct: 342 GAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSILSKARTIQVINHGSASGHMGS 401

Query: 449 GALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVNC 506
           G+L LM AELQ  SPLVP REV F R+C  +  EG W++VD   +  + E    P+ V C
Sbjct: 402 GSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSIVDFPAEGFQLEALQTPSVVRC 461

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
            R PSGC++QDMPNGYS V WVEH E   +E  +HQ++K  + SG  FGA RWV+ LQRQ
Sbjct: 462 CRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQ 521

Query: 565 CECLAILMSTSVS 577
           CE LA  ++ +++
Sbjct: 522 CERLASELARNIA 534


>gi|345193175|tpg|DAA34953.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414867891|tpg|DAA46448.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867892|tpg|DAA46449.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 884

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 213/494 (43%), Positives = 295/494 (59%), Gaps = 46/494 (9%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           A+G     A    +KKRYHRHT  QIQ++E+LFKECPHPD+KQRL+LS+ L L+ RQVKF
Sbjct: 126 AAGQQQQLATANGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF 185

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           WFQNRRTQMK Q +R +N LLR EN+ L+++N  ++ A+RN +C NCG  A++G++S EE
Sbjct: 186 WFQNRRTQMKAQQDRADNVLLRAENESLKSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEE 245

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSM---------GPPP--MPNSSLELGVGT- 288
           Q LRIENARLKDELDR+  +A ++ G    SM          PPP  MP   L++ V + 
Sbjct: 246 QQLRIENARLKDELDRLACIATRYGGGRQPSMSSSALVCLSAPPPVLMPPLDLDMNVYSR 305

Query: 289 -------INGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE---RS 338
                  + G G L  +V          G  +        + S P   G    ++   R 
Sbjct: 306 HFTDQSPVMGCGDLIQSVLGPPSQQITGGAEH--------HASTPSFMGAMAPVQEQDRQ 357

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIG------LKP 391
           + L+LA AA D L KM +  E LW+R   G+  +V+  +E+ R F+ P  G        P
Sbjct: 358 LVLDLAAAAADTLAKMCRAGESLWLRR-RGASSEVMVADEHARMFSWPVNGGQQDSSASP 416

Query: 392 NGFV--TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM--GGTR 447
            G    TE SR+  +VI+NS+ LV+  +D N+W E+FP ++++  T  +I+ G   G   
Sbjct: 417 GGAAARTEGSRDGTVVIMNSITLVDAFLDANKWMELFPSIVSKARTIQIINHGAASGHMG 476

Query: 448 NGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVN 505
           +G+L LM AELQ  SPLVP REV F R+C  +  EG W++VD   +  + E    P+ V 
Sbjct: 477 SGSLLLMQAELQFPSPLVPAREVVFFRYCVHNGDEGTWSLVDFPAEGFQLEALQTPSVVR 536

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEY--DESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           C R PSGC++QDMPNGYS V WVEH E   +E  +HQ++K  + SG  FGA RWV+ LQR
Sbjct: 537 CCRRPSGCIIQDMPNGYSSVVWVEHTEIVGEEKPLHQVFKDYVASGSAFGATRWVSLLQR 596

Query: 564 QCECLAILMSTSVS 577
           QCE LA  ++ +++
Sbjct: 597 QCERLASELARNIA 610


>gi|356532435|ref|XP_003534778.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 714

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 187/480 (38%), Positives = 288/480 (60%), Gaps = 27/480 (5%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           G SGD+     +  R+  Y R +  Q   LE   K+CPHPDE QR +L+  + LET+Q+K
Sbjct: 9   GGSGDE---GSHQGRRPSYKRLSSAQTARLERFIKDCPHPDEAQRRQLASEIGLETKQIK 65

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG-PAIIGDISL 238
           FWFQN+RTQ+K Q ER +N+ LR END++  EN+ +++A++N +C++CGG P    D   
Sbjct: 66  FWFQNKRTQIKNQHERADNTALRVENDRIHTENLLMKEALKNMLCSSCGGAPCQEEDHEH 125

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSST 298
             Q++++ENA+LK+E ++V +L  ++L +    M PP +   +  + +       G SS 
Sbjct: 126 AIQNMQLENAQLKEEHEKVSSLLARYLEK---QMSPPELQQQAFNIPI------IGSSSH 176

Query: 299 VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD-------RSIERSMFLELALAAMDEL 351
                 +     I  +      P+R G  +   D         IE+++  ++A AAM+EL
Sbjct: 177 APELENSSINYEIGGSS-SSHGPSRYGMQIMVSDDHNLLRSEGIEKALMFKVAAAAMNEL 235

Query: 352 VKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLA 411
           V++ + +EPLW +S    G+ +L HE Y + F      K      EA++E+G+V INS+ 
Sbjct: 236 VRLIRINEPLWTKSSTQDGKPILQHENYEKIFPRTNSFKGANLRVEATKESGIVSINSIQ 295

Query: 412 LVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVN 471
           L++  +DP++W  +FP ++ +  T  VI +G+ G+R+GALQLM  ++ VLSPLV  RE  
Sbjct: 296 LIDMFLDPDKWVNLFPTIVTKAETMKVIENGLVGSRSGALQLMFEQMHVLSPLVQPREFQ 355

Query: 472 FLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 531
           FLR+C+Q  EGVW + DVS D+ R+ +   +F +  R PSGC++Q+MPNG S VTWVEH 
Sbjct: 356 FLRYCQQIEEGVWVIADVSFDSFRQKT---SFFHSWRHPSGCMIQEMPNGCSMVTWVEHV 412

Query: 532 EYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYDINTL 590
           E D+  Q HQLYK LI +G+ +GA+RW+  LQR CE  A      + ++D  G+  IN+L
Sbjct: 413 EVDDKIQTHQLYKDLIATGIAYGAERWIMELQRICERFACFYVERIPSQDSGGV--INSL 470


>gi|1208940|gb|AAC37514.1| homeodomain protein 1 [Helianthus annuus]
          Length = 682

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/456 (43%), Positives = 276/456 (60%), Gaps = 55/456 (12%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT  QI+E+E+LFKE PHPDEKQR +LSKRL L  RQVKFWFQNRRTQ+KT  ERHE
Sbjct: 99  YHRHTADQIREMEALFKESPHPDEKQRQQLSKRLGLHPRQVKFWFQNRRTQIKTIQERHE 158

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS--LEEQHLRIENARLKDELD 255
           NSLL+ E DKL  EN  +R+ ++   CTNCG  +   D+   ++EQ LR+ENA+L+ E++
Sbjct: 159 NSLLKSELDKLGEENKLLRETIKKGTCTNCGFGSSSKDVHTYVDEQQLRVENAKLRAEIE 218

Query: 256 RVCALAGKFLGRP-----VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTG 310
           ++  ++   + R        S+G      SSL+L  G    FG   S V           
Sbjct: 219 KLRNISWGNIHREHHQRNSCSVGNDHENKSSLDLCSGL---FGLEKSRV----------- 264

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
                        +G   +GL +S                 V+MA    PLW++S E +G
Sbjct: 265 -------------NGGCRSGLWKS----------------FVQMASAGAPLWVKSLE-TG 294

Query: 371 RQVLNHEEYLRTFTPC--IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPC 428
           R++LN++EYL  F+      ++   F+ EASR++G+V ++   LV + MD   + EMFPC
Sbjct: 295 REILNYDEYLTKFSTVDSSNVQRLRFI-EASRDSGVVFVDLPQLVRSFMDVKEFKEMFPC 353

Query: 429 MIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD 488
           MI++ AT DVI +G G  R GA+QLM AELQ+L+PLV  REV F+R+ KQ     WA+VD
Sbjct: 354 MISKAATLDVICNGEGPNRKGAVQLMFAELQMLTPLVATREVYFVRYSKQLTAEKWAIVD 413

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIIS 548
           VSID + +   A +   CR+ PSGC+++D  NG+ KVTW+EH E  +S  H +++ +I S
Sbjct: 414 VSIDNVEKNIDA-SLARCRKRPSGCIIEDKSNGHCKVTWIEHWECQKSVSHSMFRAIINS 472

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           G+ FGA+ W+ATLQ+QCE L   ++T+V  +D  GI
Sbjct: 473 GLAFGARNWMATLQQQCERLVFFLATNVPTKDSCGI 508


>gi|12324584|gb|AAG52245.1|AC011717_13 homeobox protein (GLABRA2); 66648-63167 [Arabidopsis thaliana]
 gi|1695244|gb|AAC80260.1| homeodomain protein [Arabidopsis thaliana]
          Length = 745

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 195/470 (41%), Positives = 277/470 (58%), Gaps = 61/470 (12%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           GA+G+      N  ++K+YHRHT  QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVK
Sbjct: 88  GAAGNK---GTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVK 144

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR--NPICTNCGGPAIIGDIS 237
           FWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++    N  C NCGG        
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP------ 198

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSS 297
                L +EN++LK ELD++ A  G+          P P+  S  +      +  G L  
Sbjct: 199 ---DDLHLENSKLKAELDKLRAALGR---------TPYPLQASCSD---DQEHRLGSL-- 241

Query: 298 TVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQT 357
                   DF TG+                      ++E+S   E++  A  EL KMA +
Sbjct: 242 --------DFYTGVF---------------------ALEKSRIAEISNRATLELQKMATS 272

Query: 358 DEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK-PNGFVTEASRETGMVIINSLALVETL 416
            EP+W+RS E +GR++LN++EYL+ F        P     EASR+ G+V +++  L ++ 
Sbjct: 273 GEPMWLRSVE-TGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSF 331

Query: 417 MDPNRWAEMFPCMIARTATTDVISSGMGGTR-NGALQLMHAELQVLSPLVPVREVNFLRF 475
           MD  +W E F C+I++ AT DVI  G G +R +GA+QLM  E+Q+L+P+VP REV F+R 
Sbjct: 332 MDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRS 391

Query: 476 CKQHAEGVWAVVDVSIDT-IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
           C+Q +   WA+VDVS+      T    + + CR+LPSGC+++D  NG+SKVTWVEH +  
Sbjct: 392 CRQLSPEKWAIVDVSVSVEDSNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVS 451

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            S V  L++ L+ +G+ FGA+ WVATLQ  CE L   M+T+V  +D  G+
Sbjct: 452 ASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGV 501


>gi|18412529|ref|NP_565223.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|147744564|sp|P46607.3|HGL2_ARATH RecName: Full=Homeobox-leucine zipper protein GLABRA 2; AltName:
           Full=HD-ZIP protein ATHB-10; AltName:
           Full=Homeobox-leucine zipper protein ATHB-10
 gi|13430764|gb|AAK26004.1|AF360294_1 putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|1212757|emb|CAA91183.1| HD-ZIP [Arabidopsis thaliana]
 gi|20152552|emb|CAD29714.1| homeodomain-leucine zipper 10 [Arabidopsis thaliana]
 gi|25054963|gb|AAN71955.1| putative homeobox protein GLABRA2 [Arabidopsis thaliana]
 gi|332198190|gb|AEE36311.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 747

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 218/560 (38%), Positives = 309/560 (55%), Gaps = 92/560 (16%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSRED---LLEH 109
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR  +D    +E 
Sbjct: 8   SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVVDDEDRTVEM 59

Query: 110 ES------RSGSDNMD--------------GASGDDLDAADNPPRKKRYHRHTPQQIQEL 149
            S      RS S+                 GA+G+      N  ++K+YHRHT  QI+ +
Sbjct: 60  SSENSGPTRSRSEEDLEGEDHDDEEEEEEDGAAGNK---GTNKRKRKKYHRHTTDQIRHM 116

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 209
           E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR
Sbjct: 117 EALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLR 176

Query: 210 AENMSIRDAMR--NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR 267
            EN ++R++    N  C NCGG             L +EN++LK ELD++ A  G+    
Sbjct: 177 EENKAMRESFSKANSSCPNCGGGP---------DDLHLENSKLKAELDKLRAALGR---- 223

Query: 268 PVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPG 327
                 P P+  S  +      +  G L          DF TG+                
Sbjct: 224 -----TPYPLQASCSD---DQEHRLGSL----------DFYTGVF--------------- 250

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCI 387
                 ++E+S   E++  A  EL KMA + EP+W+RS E +GR++LN++EYL+ F    
Sbjct: 251 ------ALEKSRIAEISNRATLELQKMATSGEPMWLRSVE-TGREILNYDEYLKEFPQAQ 303

Query: 388 GLK-PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
               P     EASR+ G+V +++  L ++ MD  +W E F C+I++ AT DVI  G G +
Sbjct: 304 ASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPS 363

Query: 447 R-NGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT-IRETSGAPAFV 504
           R +GA+QLM  E+Q+L+P+VP REV F+R C+Q +   WA+VDVS+      T    + +
Sbjct: 364 RIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVEDSNTEKEASLL 423

Query: 505 NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
            CR+LPSGC+++D  NG+SKVTWVEH +   S V  L++ L+ +G+ FGA+ WVATLQ  
Sbjct: 424 KCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLH 483

Query: 565 CECLAILMSTSVSARDHTGI 584
           CE L   M+T+V  +D  G+
Sbjct: 484 CERLVFFMATNVPTKDSLGV 503


>gi|334184032|ref|NP_001185443.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
 gi|332198191|gb|AEE36312.1| homeobox-leucine zipper protein GLABRA 2 [Arabidopsis thaliana]
          Length = 776

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 218/560 (38%), Positives = 309/560 (55%), Gaps = 92/560 (16%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSRED---LLEH 109
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR  +D    +E 
Sbjct: 37  SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVVDDEDRTVEM 88

Query: 110 ES------RSGSDNMD--------------GASGDDLDAADNPPRKKRYHRHTPQQIQEL 149
            S      RS S+                 GA+G+      N  ++K+YHRHT  QI+ +
Sbjct: 89  SSENSGPTRSRSEEDLEGEDHDDEEEEEEDGAAGNK---GTNKRKRKKYHRHTTDQIRHM 145

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR 209
           E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR
Sbjct: 146 EALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLR 205

Query: 210 AENMSIRDAMR--NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR 267
            EN ++R++    N  C NCGG             L +EN++LK ELD++ A  G+    
Sbjct: 206 EENKAMRESFSKANSSCPNCGGGP---------DDLHLENSKLKAELDKLRAALGR---- 252

Query: 268 PVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPG 327
                 P P+  S  +      +  G L          DF TG+                
Sbjct: 253 -----TPYPLQASCSD---DQEHRLGSL----------DFYTGVF--------------- 279

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCI 387
                 ++E+S   E++  A  EL KMA + EP+W+RS E +GR++LN++EYL+ F    
Sbjct: 280 ------ALEKSRIAEISNRATLELQKMATSGEPMWLRSVE-TGREILNYDEYLKEFPQAQ 332

Query: 388 GLK-PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
               P     EASR+ G+V +++  L ++ MD  +W E F C+I++ AT DVI  G G +
Sbjct: 333 ASSFPGRKTIEASRDAGIVFMDAHKLAQSFMDVGQWKETFACLISKAATVDVIRQGEGPS 392

Query: 447 R-NGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT-IRETSGAPAFV 504
           R +GA+QLM  E+Q+L+P+VP REV F+R C+Q +   WA+VDVS+      T    + +
Sbjct: 393 RIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSVSVEDSNTEKEASLL 452

Query: 505 NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
            CR+LPSGC+++D  NG+SKVTWVEH +   S V  L++ L+ +G+ FGA+ WVATLQ  
Sbjct: 453 KCRKLPSGCIIEDTSNGHSKVTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLH 512

Query: 565 CECLAILMSTSVSARDHTGI 584
           CE L   M+T+V  +D  G+
Sbjct: 513 CERLVFFMATNVPTKDSLGV 532


>gi|60099373|dbj|BAD89977.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 633

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 195/470 (41%), Positives = 277/470 (58%), Gaps = 61/470 (12%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           GA+G+      N  ++K+YHRHT  QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVK
Sbjct: 88  GAAGNK---GTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVK 144

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR--NPICTNCGGPAIIGDIS 237
           FWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++    N  C NCGG        
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP------ 198

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSS 297
                L +EN++LK ELD++ A  G+          P P+  S  +      +  G L  
Sbjct: 199 ---DDLHLENSKLKAELDKLRAALGR---------TPYPLQASCSD---DQEHRLGSL-- 241

Query: 298 TVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQT 357
                   DF TG+                      ++E+S   E++  A  EL KMA +
Sbjct: 242 --------DFYTGVF---------------------ALEKSRIAEISNRATLELQKMATS 272

Query: 358 DEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK-PNGFVTEASRETGMVIINSLALVETL 416
            EP+W+RS E +GR++LN++EYL+ F        P     EASR+ G+V +++  L ++ 
Sbjct: 273 GEPMWLRSVE-TGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLAQSF 331

Query: 417 MDPNRWAEMFPCMIARTATTDVISSGMGGTR-NGALQLMHAELQVLSPLVPVREVNFLRF 475
           MD  +W E F C+I++ AT DVI  G G +R +GA+QLM  E+Q+L+P+VP REV F+R 
Sbjct: 332 MDVGQWKETFACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRS 391

Query: 476 CKQHAEGVWAVVDVSIDT-IRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
           C+Q +   WA+VDVS+      T    + + CR+LPSGC+++D  NG+SKVTWVEH +  
Sbjct: 392 CRQLSPEKWAIVDVSVSVEDSNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVS 451

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
            S V  L++ L+ +G+ FGA+ WVATLQ  CE L   M+T+V  +D  G+
Sbjct: 452 ASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGV 501


>gi|356558073|ref|XP_003547333.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 713

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 188/487 (38%), Positives = 286/487 (58%), Gaps = 41/487 (8%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           G SGD+     N  R+  Y R T  Q   LE   K+CPHPDE QR +L+  + LET+QVK
Sbjct: 9   GGSGDEGSDNFNQGRRPSYKRLTSAQTARLERFIKDCPHPDEAQRRQLASEIGLETKQVK 68

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLE 239
           FWFQN+RTQ+K Q ER +N+ LR END++ ++N+ ++ A++N +C +CGG     D    
Sbjct: 69  FWFQNKRTQIKNQHERADNTALRVENDRIHSKNLLMKKALKNMLCPSCGGAPCQDDREHL 128

Query: 240 EQHLRIENARLKDELDRVCALAGKFLGR-------------PV--SSMGPPPMPNSSLEL 284
            Q ++ EN+RLK+E ++V +L  ++L +             P+  SS   P + NSSL  
Sbjct: 129 MQKMQHENSRLKEEHEKVSSLLARYLEKQMSPPEFQQVFNIPIIGSSSHAPKLENSSLNY 188

Query: 285 GVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
            +G  +  G          P+ +G  I +        + +  G  G    IE+++ L++A
Sbjct: 189 EIGGSSSHG----------PSLYGMQIMDG------HDHNLMGSEG----IEKTLMLKVA 228

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
            +AM+ELV++ + +EP WI+S    G+ +L HE Y + F      K      EA++++G+
Sbjct: 229 ASAMEELVRLIRINEPCWIKSSTQDGQLILQHENYEKMFPRTNNFKGVNLRVEATKDSGI 288

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           V INS+ LV+  +D ++W  +FP ++ +  T  V+ +G+ G+R+GALQLM  ++ VLSPL
Sbjct: 289 VSINSIQLVDMFLDSDKWINLFPTIVTKAKTIKVLENGLVGSRSGALQLMFEQMHVLSPL 348

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           V  RE  FLR+C+Q  EGVW + DVS D+ R+ +   +F +  R PSGC++Q+MPNG S 
Sbjct: 349 VQPREFQFLRYCEQIEEGVWVIADVSFDSFRQKT---SFFHSWRHPSGCMIQEMPNGCSM 405

Query: 525 VTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           VTWVEH E D+  Q HQLYK LI +G+ +G +RW+  LQR  E  A      +  +D  G
Sbjct: 406 VTWVEHVEVDDKIQTHQLYKDLIGTGIAYGTERWIMELQRIGERFACFYVERIPIQDSGG 465

Query: 584 IYDINTL 590
           +  IN+L
Sbjct: 466 V--INSL 470


>gi|14587301|dbj|BAB61212.1| putative homeobox protein GLABRA2 [Oryza sativa Japonica Group]
          Length = 779

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 213/551 (38%), Positives = 307/551 (55%), Gaps = 55/551 (9%)

Query: 55  PQPLSKSMFNSPGLSLAL-----QQPNIDNQGG-----GDLQLQRMGESFEGIIGRRSRE 104
           P+P +K  F +P LSL L     ++      GG     GD ++Q  GE+   I    +  
Sbjct: 6   PRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGEAAVEISSENAGP 65

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
              + +S  GS    G   DD + ++   R+K YHRHT +QI+ +E+LFKE PHPDE+QR
Sbjct: 66  GCRQSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQR 125

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI- 223
            ++SK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KL+ E+ ++R+  + P  
Sbjct: 126 QQVSKQLGLSARQVKFWFQNRRTQIKAVQERHENSLLKSELEKLQDEHRAMRELAKKPSR 185

Query: 224 CTNCG-------GPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           C NCG         A        EQ LR+E A+LK E++R+    GK     ++S   PP
Sbjct: 186 CLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLRGTPGKSAADGIAS---PP 242

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
              S+           G + +   +    D   G                    L    +
Sbjct: 243 CSASA-----------GAMQTNSRSPPLHDHDGGF-------------------LRHDDD 272

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN---G 393
           +   LELA  A+DELV M  + EP+W+R  E +GR +LN++EY+R F    G   +   G
Sbjct: 273 KPRILELATRALDELVGMCSSGEPVWVRGVE-TGRDILNYDEYVRLFRRDHGGSGDQMAG 331

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           +  EASRE G+V ++++ LV T MD ++W ++FP MI++ AT ++IS+     R+G LQL
Sbjct: 332 WTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQL 391

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M+AELQ L+P+VP RE+ F R+CK+ A   WA+VDVS D       A + V C + PSGC
Sbjct: 392 MYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWKNPSGC 451

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           ++++  NG  K+TWVEH       V  LY+ +  SG+ FGA+RWVA LQ QCE +   ++
Sbjct: 452 LIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVA 511

Query: 574 TSVSARDHTGI 584
           T+V  RD TG+
Sbjct: 512 TNVPTRDSTGV 522


>gi|414585329|tpg|DAA35900.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 683

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 185/398 (46%), Positives = 255/398 (64%), Gaps = 26/398 (6%)

Query: 189 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
           ++ Q ER ENS LR EN+KLRAENM  ++A+ +  C NCGGPA +G++S +E HLR+ENA
Sbjct: 17  LQNQHERQENSQLRAENEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENA 76

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
           RL++E+DR+ A+A K++G+P+ S      P +        I+  G L    T    AD  
Sbjct: 77  RLREEIDRISAIAAKYVGKPMVSFPVLSSPLAGARPSPLDIDSGGVLGGAATYGGAADIF 136

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW---IRS 365
            G                   G  R  ++ M +ELA+ AM+ELV+MAQ DEPLW      
Sbjct: 137 GGGGGVA------------ACGAARDCDKPMIVELAVTAMEELVRMAQLDEPLWNAPAGG 184

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGL---KPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
            +GS  + LN EEY R F P  GL   K  GF +EASR++ +VI+   +LVE LMD N++
Sbjct: 185 HDGSA-ETLNEEEYARMFVPAGGLGLKKQYGFKSEASRDSSVVIMTHASLVEILMDVNQY 243

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
           A +F  +++R AT +V+S+G+ G  NGALQ+M  E QV SPLVP R+  F+R+CKQ+A+G
Sbjct: 244 ATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRDSYFVRYCKQNADG 303

Query: 483 VWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
            WAVVDVS+DT        + + CRR PSGC++Q+MPNGYSKVTWVEH E D+  V+ +Y
Sbjct: 304 TWAVVDVSLDT-------SSVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVNGIY 356

Query: 543 KPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           K L+ SG+ FGA+RWV TL RQCE LA +M++++   D
Sbjct: 357 KLLVDSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 394


>gi|75106330|sp|Q5JMF3.1|ROC9_ORYSJ RecName: Full=Homeobox-leucine zipper protein ROC9; AltName:
           Full=GLABRA 2-like homeobox protein 9; AltName:
           Full=HD-ZIP protein ROC9; AltName: Full=Homeodomain
           transcription factor ROC9; AltName: Full=Protein RICE
           OUTERMOST CELL-SPECIFIC 9
 gi|57900354|dbj|BAD87344.1| putative homeodomain protein [Oryza sativa Japonica Group]
          Length = 816

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 216/556 (38%), Positives = 308/556 (55%), Gaps = 32/556 (5%)

Query: 55  PQPLSKSMFNSPGLSLAL-----QQPNIDNQGG-----GDLQLQRMGESFEGIIGRRSRE 104
           P+P +K  F +P LSL L     ++      GG     GD ++Q  GE+   I    +  
Sbjct: 6   PRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGEAAVEISSENAGP 65

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
              + +S  GS    G   DD + ++   R+K YHRHT +QI+ +E+LFKE PHPDE+QR
Sbjct: 66  GCRQSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQR 125

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI- 223
            ++SK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KL+ E+ ++R+  + P  
Sbjct: 126 QQVSKQLGLSARQVKFWFQNRRTQIKAVQERHENSLLKSELEKLQDEHRAMRELAKKPSR 185

Query: 224 CTNCG-------GPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           C NCG         A        EQ LR+E A+LK E   VC    +   RP        
Sbjct: 186 CLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAE---VCMPPPRSRARPFRCA--TL 240

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI- 335
               S EL +  +     L  T   +      +   +A    M  N   P +   D    
Sbjct: 241 QDTDSGELAMLNLFQIERLRGTPGKSAADGIASPPCSASAGAMQTNSRSPPLHDHDGGFL 300

Query: 336 ----ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
               ++   LELA  A+DELV M  + EP+W+R  E +GR +LN++EY+R F    G   
Sbjct: 301 RHDDDKPRILELATRALDELVGMCSSGEPVWVRGVE-TGRDILNYDEYVRLFRRDHGGSG 359

Query: 392 N---GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN 448
           +   G+  EASRE G+V ++++ LV T MD ++W ++FP MI++ AT ++IS+     R+
Sbjct: 360 DQMAGWTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRD 419

Query: 449 GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRR 508
           G LQLM+AELQ L+P+VP RE+ F R+CK+ A   WA+VDVS D       A + V C +
Sbjct: 420 GVLQLMYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWK 479

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
            PSGC++++  NG  K+TWVEH       V  LY+ +  SG+ FGA+RWVA LQ QCE +
Sbjct: 480 NPSGCLIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERM 539

Query: 569 AILMSTSVSARDHTGI 584
              ++T+V  RD TG+
Sbjct: 540 VFAVATNVPTRDSTGV 555


>gi|224077468|ref|XP_002305259.1| predicted protein [Populus trichocarpa]
 gi|222848223|gb|EEE85770.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  347 bits (891), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 193/476 (40%), Positives = 288/476 (60%), Gaps = 48/476 (10%)

Query: 117 NMDGASGDDLDAADNPPRK--KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           N  GASGD+ +AA N   +  K YHRH+ QQI +LE  FKECPHPDE QR +LS+ L LE
Sbjct: 1   NNGGASGDEHEAASNSRNQGNKAYHRHSNQQIHQLEKFFKECPHPDENQRRQLSRELGLE 60

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            +Q+KFWFQN+RTQ K Q ER +NS+LR EN++++ EN++I +A++N IC  CGGP   G
Sbjct: 61  AKQIKFWFQNKRTQKKAQSERADNSVLRLENERIQCENLAIIEALKNVICPACGGPP-FG 119

Query: 235 DISLEE--QHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
           +   +   Q L+ ENARLK+E  +  +         + S+ P          G G+ +G 
Sbjct: 120 EEERQRSLQKLKQENARLKEEARKSIS--------QIDSLTP----------GAGSSHG- 160

Query: 293 GGLSSTVTTTLPA---DFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMD 349
                 V TT P    +   G+ N+  V     R G     LD  +E+++  E A +A D
Sbjct: 161 ------VLTTNPGIDLERNPGLDNSQLVY---KRRGI----LD--MEKALMAETAASAAD 205

Query: 350 ELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINS 409
           ELV++ + +EPLWI+S    GR +++   Y + +      K +    E+S+++ MVI+  
Sbjct: 206 ELVRLLRVNEPLWIKS-PSDGRYIIDRVGYEKLYPRDSHFKSSNARVESSKDSAMVIMPG 264

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV+  +DPN+W ++FP ++ +  T  ++ +G  G RNG+LQ+M+ ++ +LSPLVP RE
Sbjct: 265 MDLVDMFLDPNKWMDLFPTIVTKARTILLLEAGTVGNRNGSLQMMYEQMHILSPLVPPRE 324

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVE 529
             FLR C+Q   G W + D+S D +R+ S + A+    RLPSGC++QD  NG SKVTWVE
Sbjct: 325 FYFLRLCQQLEPGEWVIADISYDFMRDGSPSRAW----RLPSGCMIQDKSNGCSKVTWVE 380

Query: 530 HAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           H E D+ +Q H+LY+ LI     +GA+RW+A+L+R CE LA     + +AR+  G+
Sbjct: 381 HVEVDDRTQTHRLYRDLICGRSAYGAERWIASLRRICERLAFYKEETAAAREFGGV 436


>gi|9759430|dbj|BAB10227.1| homeobox protein [Arabidopsis thaliana]
          Length = 783

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 199/465 (42%), Positives = 278/465 (59%), Gaps = 33/465 (7%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P +KKRYHRHT +QIQE+E+LFKE PHPD+KQR  LS  L L+ RQVKFWFQNRRTQMK 
Sbjct: 109 PAKKKRYHRHTNRQIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKA 168

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
           Q +R+EN +LR END L++EN  ++  +R   C +CGGP ++GDI   E H  IEN RL+
Sbjct: 169 QQDRNENVMLRAENDNLKSENCHLQAELRCLSCPSCGGPTVLGDIPFNEIH--IENCRLR 226

Query: 252 DELDRVCALAGKFLGRPVSSMGP--------PPMPNS--SLELGVGTING-FGGLSSTVT 300
           +ELDR+C +A ++ GRP+ SM P        P +P+   SLEL +    G F   S T  
Sbjct: 227 EELDRLCCIASRYTGRPMQSMPPSQPLINPSPMLPHHQPSLELDMSVYAGNFPEQSCTDM 286

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
             LP       +   P     N +   +   D   E+ + +E A++ + EL KM  T+EP
Sbjct: 287 MMLPPQ---DTACFFPDQTANNNNNNNMLLADE--EKVIAMEFAVSCVQELTKMCDTEEP 341

Query: 361 LWIRSFE---GSGRQVLNHEEYLRTFTPCIGLKPN--GFVTEASRETGMVIINSLALVET 415
           LWI+      G     LN EEY+R F   +  + N   F+ EAS+   +VI+NS+ LV+ 
Sbjct: 342 LWIKKKSDKIGGEILCLNEEEYMRLFPWPMENQNNKGDFLREASKANAVVIMNSITLVDA 401

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
            ++ ++W+EMF  ++AR  T  +ISSG+ G     L ++   +         RE  FLR+
Sbjct: 402 FLNADKWSEMFCSIVARAKTVQIISSGVSGASGSLLLVLSPLVP-------TREAYFLRY 454

Query: 476 CKQHAE-GVWAVVDVSIDTIRETSGAPAFVN--CRRLPSGCVVQDMPNGYSKVTWVEHAE 532
            +Q+AE G WA+VD  ID+  +       +    +R PSGC++QDMPNGYS+V WVEH E
Sbjct: 455 VEQNAETGNWAIVDFPIDSFHDQMQPMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVE 514

Query: 533 YDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            DE  VH+ +   + SGM FGA RW+  LQRQCE +A LM+ +++
Sbjct: 515 VDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIASLMARNIT 559


>gi|213950357|gb|ACJ54443.1| GL2a [Brassica napus]
          Length = 750

 Score =  341 bits (875), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 209/554 (37%), Positives = 303/554 (54%), Gaps = 78/554 (14%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRR--SREDLLEHE 110
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR    ED     
Sbjct: 8   SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVADDEDRTVEM 59

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKR------------YHRHTPQQIQELESLFKECPH 158
           S   S      S D+L+  ++   +              YHRHT  QI+ +E+LFKE PH
Sbjct: 60  SSENSGPTRSRSKDNLEGEEDQEEEDGAGNKGNKRKRKKYHRHTTDQIRHMEALFKETPH 119

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++
Sbjct: 120 PDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRES 179

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP 278
                 ++C      G        L +EN +LK ELD++ A  G+          P P+ 
Sbjct: 180 FSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAELDKLRAALGR---------TPYPLQ 230

Query: 279 NS---SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
            S     +  VG++  + G+ +                                     +
Sbjct: 231 ASCSDDQQRRVGSLELYTGVFA-------------------------------------L 253

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           E+S  +E+A  A  EL KMA + EPLW+RS E +GR++LN++EYL+ F        +G  
Sbjct: 254 EKSRIVEIANRATLELQKMATSGEPLWLRSLE-TGREILNYDEYLKEFPQAQASSFHGRK 312

Query: 396 T-EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR-NGALQL 453
           T EASR+ G+V +++  L ++ MD  +W EMF C+I++  T DVI  G G +R +GA+QL
Sbjct: 313 TIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQL 372

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLP 510
           M  E+Q+L+P+VP REV F+R C+Q +   WA+VDVS+ ++ E + A    + + CR+ P
Sbjct: 373 MFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SMEEDNNAEKEGSLLRCRKRP 431

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC+++D  NG+SKVTWVEH +   S V  L++  + +G+ FGA+ WVATLQ  CE L  
Sbjct: 432 SGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCERLVF 491

Query: 571 LMSTSVSARDHTGI 584
            M+T+V  +D  G+
Sbjct: 492 FMATNVPTKDSLGV 505


>gi|213950363|gb|ACJ54446.1| GL2a [Brassica oleracea]
          Length = 750

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 206/554 (37%), Positives = 299/554 (53%), Gaps = 77/554 (13%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRR--SREDLLEHE 110
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR    ED     
Sbjct: 8   SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVADDEDRTVEM 59

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKR------------YHRHTPQQIQELESLFKECPH 158
           S   S      S D+L+  ++   +              YHRHT  QI+ +E+LFKE PH
Sbjct: 60  SSENSGPTRSRSEDNLEGEEDQEEEDGAGNKGNKRKRKKYHRHTTDQIRHMEALFKETPH 119

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++
Sbjct: 120 PDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRES 179

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP 278
                 ++C      G        L +EN +LK ELD++ A  G+          P P+ 
Sbjct: 180 FSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAELDKLRAALGR---------TPYPLQ 230

Query: 279 NSSLE---LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
            S  +     VG++  + G+ +                                     +
Sbjct: 231 ASCSDDQHRRVGSLELYTGVFA-------------------------------------L 253

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           E+S  +E+A  A  E+ KMA + EPLW+RS E +GR++LN++EYL+ F        +G  
Sbjct: 254 EKSRIVEIANRATLEVQKMATSGEPLWLRSLE-TGREILNYDEYLKEFPQAQASSFHGRK 312

Query: 396 T-EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR-NGALQL 453
           T EASR+ G+V +++  L ++ MD  +W EMF C+I++  T DVI  G G +R +GA+QL
Sbjct: 313 TIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQL 372

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE---TSGAPAFVNCRRLP 510
           M  E+Q+L+P+VP REV F+R C+Q +   W +VDVS+    +   T    + + CR+ P
Sbjct: 373 MFGEMQLLTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRP 432

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC+++D  NG+SKVTWVEH +   S V  L++  + +G+ FGA+ WVATLQ  CE L  
Sbjct: 433 SGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVF 492

Query: 571 LMSTSVSARDHTGI 584
            M+T+V  +D  G+
Sbjct: 493 FMATNVPTKDSLGV 506


>gi|213950359|gb|ACJ54444.1| GL2b [Brassica napus]
          Length = 750

 Score =  338 bits (866), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 206/554 (37%), Positives = 299/554 (53%), Gaps = 77/554 (13%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRR--SREDLLEHE 110
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR    ED     
Sbjct: 8   SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVADDEDRTVEM 59

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKR------------YHRHTPQQIQELESLFKECPH 158
           S   S      S D+L+  ++   +              YHRHT  QI+ +E+LFKE PH
Sbjct: 60  SSENSGPTRSRSEDNLEGEEDQEEEDGAGNKGNKRKRKKYHRHTTDQIRHMEALFKETPH 119

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++
Sbjct: 120 PDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRES 179

Query: 219 MRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP 278
                 ++C      G        L +EN +LK ELD++ A  G+          P P+ 
Sbjct: 180 FSKANSSSCPNCGGGGGGGGSPDDLHLENTKLKAELDKLRAALGR---------TPYPLQ 230

Query: 279 NSSLE---LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
            S  +     VG++  + G+ +                                     +
Sbjct: 231 ASCSDDQHRRVGSLELYTGVFA-------------------------------------L 253

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           E+S  +E+A  A  E+ KMA + EPLW+RS E +GR++LN++EYL+ F        +G  
Sbjct: 254 EKSRIVEIANRATLEVQKMATSGEPLWLRSLE-TGREILNYDEYLKEFPQAQASSFHGRK 312

Query: 396 T-EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR-NGALQL 453
           T EASR+ G+V +++  L ++ MD  +W EMF C+I++  T DVI  G G +R +GA+QL
Sbjct: 313 TIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRIDGAIQL 372

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE---TSGAPAFVNCRRLP 510
           M  E+Q+L+P+VP REV F+R C+Q +   W +VDVS+    +   T    + + CR+ P
Sbjct: 373 MFGEMQLLTPVVPTREVYFVRSCRQLSPEKWVIVDVSVSVEEDNNSTEKEGSLLRCRKRP 432

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC+++D  NG+SKVTWVEH +   S V  L++  + +G+ FGA+ WVATLQ  CE L  
Sbjct: 433 SGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGARHWVATLQLHCERLVF 492

Query: 571 LMSTSVSARDHTGI 584
            M+T+V  +D  G+
Sbjct: 493 FMATNVPTKDSLGV 506


>gi|224134761|ref|XP_002327482.1| predicted protein [Populus trichocarpa]
 gi|222836036|gb|EEE74457.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 190/473 (40%), Positives = 268/473 (56%), Gaps = 54/473 (11%)

Query: 117 NMDGASGDDLDAADNPPR-KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           N  G SGD+ +A ++  + KK YHRHT QQI +LE  FKECPHP+EKQR +LS+ L LE 
Sbjct: 1   NNGGVSGDEHEAFNSGNKGKKAYHRHTCQQILQLEKFFKECPHPNEKQRRQLSRELGLEA 60

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG-PAIIG 234
           +Q+KFWFQNRRTQ K Q ER +NS+LR EN+++  EN+SIR+AM+N IC  CGG P    
Sbjct: 61  KQIKFWFQNRRTQEKAQSERSDNSVLRTENERIHCENLSIREAMKNVICPACGGHPFGEE 120

Query: 235 DISLEEQHLRIENARLKDELDRVCALA-GKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           +  L  Q LR ENARL++E   +      + +G P    G  P                 
Sbjct: 121 ERQLNLQKLRQENARLREEAKELPTFVQNQRMGNPGIDWGRNP----------------- 163

Query: 294 GLSSTVTTTLPADFGTGISN-ALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELV 352
                         G+ IS+ A  +   P+            +E ++  E A  AMDEL+
Sbjct: 164 --------------GSDISHFAYRLEGIPD------------MENALMAETAAGAMDELI 197

Query: 353 KMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLAL 412
           ++ + +EP WI+S    GR +L+   Y R +             E+S+++  V +  + L
Sbjct: 198 RLLRVNEPFWIKS-PSDGRLILDRLSYERIYPRAAHFISRNARVESSKDSATVTMPGMDL 256

Query: 413 VETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNF 472
           V+  +DPN+W ++FP ++    T  V+ +G  G R+G+LQ+M+ ++ +LSPLVP RE  F
Sbjct: 257 VDMFLDPNKWVDLFPTIVTEARTIHVLEAGTVGNRHGSLQMMYEQMHILSPLVPPREFYF 316

Query: 473 LRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAE 532
           LR C Q   G W + DVS D ++E+   P      RLPSGC++QDMPNG SK+ WVEH E
Sbjct: 317 LRLCLQLEPGQWVIADVSYDYLKESGSPPC---AWRLPSGCMIQDMPNGCSKIIWVEHVE 373

Query: 533 Y-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
             D  Q H LY+ LI     +GA+RW+A+LQR CE LA   ST+V  R+  G+
Sbjct: 374 ANDRIQTHCLYRDLICGSYAYGAERWIASLQRICERLA--FSTAVPPRELGGV 424


>gi|357131009|ref|XP_003567136.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ROC9-like [Brachypodium distachyon]
          Length = 758

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/549 (37%), Positives = 304/549 (55%), Gaps = 55/549 (10%)

Query: 54  TPQPLSKSMFNSPGLSLALQQPNIDNQ-GGGDLQLQRMGESFEGIIGRRSREDLLEHESR 112
           + +P +K  F +P LSL+L      N       +    G+ ++G I R    ++    + 
Sbjct: 3   SSRPRTKDFFAAPALSLSLAGAFGRNAPAATSGEEVEEGDEWDGGI-RGEEVEISSENTG 61

Query: 113 SGSDNMDGASGDDLDAADNPPRKKR--YHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
            GS + DG   +      N  ++ R  YHRHT +Q++ +E++FKE PHPDEKQR +LS++
Sbjct: 62  PGSPSGDGDGEEGHGDGGNKKKRSRKSYHRHTAEQVRVMEAVFKESPHPDEKQRQQLSEQ 121

Query: 171 LCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI-CTNCGG 229
           L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E + ++ EN ++R+  R P  C NCG 
Sbjct: 122 LGLSPRQVKFWFQNRRTQIKAIQERHENSLLKSELENVQKENRAMRELARRPSRCANCGV 181

Query: 230 PAIIGD------ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLE 283
            A   D       + +E+ L++ENARLK E++++ A  GK +      +  P     ++ 
Sbjct: 182 EAASSDDVDPAAAARQEEQLQLENARLKAEIEKLRATXGKAVS--TDGVASPAFSAGTVL 239

Query: 284 LGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLEL 343
           L   + N                             P    G G+TG D    +   LEL
Sbjct: 240 LQTNSRN-----------------------------PVEDYGGGLTGHD----KQSILEL 266

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF---TPCIGLKPNGFVTEASR 400
           A  A++EL  M  + EPLW+RS E +GR +LN++EYLR F       G +  G+  EASR
Sbjct: 267 AGRALEELTTMCSSGEPLWVRSLE-TGRDILNYDEYLRLFGRDDDGSGDQRAGWSVEASR 325

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG---MGGTRNGALQLMHAE 457
           E+G+V I++  LV   MD N+W E+F  MIA+ +T DVI +G        +G +QLM AE
Sbjct: 326 ESGVVYIDATQLVHAFMDVNQWKELFLPMIAKASTLDVIRTGENDDDDGPDGVVQLMFAE 385

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA-FVNCRRLPSGCVVQ 516
           +Q+L+P+VP RE+ F R+CK+ A   WA VDVS D        P+    C + PSGC+++
Sbjct: 386 VQMLTPMVPTRELYFARYCKKLAAEKWATVDVSFDKADAGGMDPSPPARCWKNPSGCIIE 445

Query: 517 DMPNGYSKVTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           +  NG+S+VTWVEH    ES     +Y+ +  SG+ FGA+RW+ATLQ QCE +   ++T+
Sbjct: 446 EQTNGHSRVTWVEHTRRPESAGAPSMYRAVTASGLAFGARRWLATLQLQCERMVFSVATN 505

Query: 576 VSARDHTGI 584
           V  RD  G+
Sbjct: 506 VPTRDSNGV 514


>gi|317468126|gb|ADV30316.1| GLABRA2 [Mimulus guttatus]
          Length = 558

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 183/438 (41%), Positives = 266/438 (60%), Gaps = 48/438 (10%)

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KE PHPDE QRL+LSK+L L  RQVKFWFQNRRTQ+K   ERHENS+L+ E DKLR EN 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPRQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 214 SIRDAMRNPICTNCGGPAIIGDISL----EEQHLRIENARLKDELDRVCALAGKFLGRPV 269
            +R+ +++P C NCG     G  S+    +EQ LRIENA LK E++++ ++ GK      
Sbjct: 61  VLRETLKSPSCPNCGFATTSGKESITAATDEQRLRIENATLKTEVEKLRSIIGK------ 114

Query: 270 SSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVT 329
           SS G    PN+S     G IN     SS        DF TG                   
Sbjct: 115 SSQGTS--PNTSSCSPPGNINDQENRSS-------FDFNTG------------------- 146

Query: 330 GLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF---TPC 386
             +  +ER    +   +A++EL+KMA   EPLW+ S+E +GR++LN++EY + F      
Sbjct: 147 --NIGLERLRVKDTVKSALNELIKMATHREPLWVPSYE-TGREILNYDEYTKQFGNENYY 203

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
             ++PN  + EASR++ ++ ++ L LV++ MD NRW E+FPC+I+  +T DVI +G    
Sbjct: 204 NKMQPNKSI-EASRDSAIIFVDLLWLVQSFMDANRWQELFPCLISSASTVDVICNGEXEN 262

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
            + A+ LM AE+Q+L+P+V  RE+ F R CK+     WA+VDVSID   E +   +   C
Sbjct: 263 GDXAVHLMFAEIQMLTPMVATREMYFFRHCKKLNTNQWAIVDVSID---EDNIDASSQKC 319

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           R+ PSGC+++D  NG+ KVTW+EH E  +  +H LY+ ++ +G+ FGA+ W+ TLQ+QCE
Sbjct: 320 RKRPSGCIIEDKSNGHCKVTWMEHIECQKIPIHSLYRSIVNTGLAFGARHWICTLQQQCE 379

Query: 567 CLAILMSTSVSARDHTGI 584
            L   ++T+V  +D +G+
Sbjct: 380 RLVFHVATNVPVKDSSGV 397


>gi|414867890|tpg|DAA46447.1| TPA: outer cell layer4 [Zea mays]
          Length = 731

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 199/466 (42%), Positives = 278/466 (59%), Gaps = 46/466 (9%)

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +E+LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRTQMK Q +R +N LLR EN+ L
Sbjct: 1   MEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESL 60

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           +++N  ++ A+RN +C NCG  A++G++S EEQ LRIENARLKDELDR+  +A ++ G  
Sbjct: 61  KSDNYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGR 120

Query: 269 VSSM---------GPPP--MPNSSLELGVGT--------INGFGGLSSTVTTTLPADFGT 309
             SM          PPP  MP   L++ V +        + G G L  +V          
Sbjct: 121 QPSMSSSALVCLSAPPPVLMPPLDLDMNVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITG 180

Query: 310 GISNALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVKMAQTDEPLWIRSF 366
           G  +        + S P   G    ++   R + L+LA AA D L KM +  E LW+R  
Sbjct: 181 GAEH--------HASTPSFMGAMAPVQEQDRQLVLDLAAAAADTLAKMCRAGESLWLRR- 231

Query: 367 EGSGRQVLNHEEYLRTFT-PCIG------LKPNGFV--TEASRETGMVIINSLALVETLM 417
            G+  +V+  +E+ R F+ P  G        P G    TE SR+  +VI+NS+ LV+  +
Sbjct: 232 RGASSEVMVADEHARMFSWPVNGGQQDSSASPGGAAARTEGSRDGTVVIMNSITLVDAFL 291

Query: 418 DPNRWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           D N+W E+FP ++++  T  +I+ G   G   +G+L LM AELQ  SPLVP REV F R+
Sbjct: 292 DANKWMELFPSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVVFFRY 351

Query: 476 CKQHA-EGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           C  +  EG W++VD   +  + E    P+ V C R PSGC++QDMPNGYS V WVEH E 
Sbjct: 352 CVHNGDEGTWSLVDFPAEGFQLEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVWVEHTEI 411

Query: 534 --DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
             +E  +HQ++K  + SG  FGA RWV+ LQRQCE LA  ++ +++
Sbjct: 412 VGEEKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIA 457


>gi|317468124|gb|ADV30315.1| GLABRA2 [Mimulus guttatus]
          Length = 528

 Score =  335 bits (858), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 183/438 (41%), Positives = 265/438 (60%), Gaps = 48/438 (10%)

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KE PHPDE QRL+LSK+L L   QVKFWFQNRRTQ+K   ERHENS+L+ E DKLR EN 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPGQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 214 SIRDAMRNPICTNCGGPAIIGDISL----EEQHLRIENARLKDELDRVCALAGKFLGRPV 269
            +R+ +++P C NCG     G  S+    +EQ LRIENA LK E++++ ++ GK      
Sbjct: 61  VLRETLKSPSCPNCGFATTSGKESITAATDEQRLRIENATLKTEVEKLRSIIGK------ 114

Query: 270 SSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVT 329
           SS G    PN+S     G IN     SS        DF TG                   
Sbjct: 115 SSQGTS--PNTSSCSPPGNINDQENRSS-------FDFNTG------------------- 146

Query: 330 GLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF---TPC 386
             +  +ER    +   +A++EL+KMA   EPLW+ S+E +GR++LN++EY + F      
Sbjct: 147 --NIGLERLRVKDTVKSALNELIKMATHREPLWVPSYE-TGREILNYDEYTKQFGNENYY 203

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
             ++PN  + EAS+++ ++ ++ L LV +  D NRW E+FPC+I+  +T DVI +G G  
Sbjct: 204 NKMQPNKSI-EASKDSAIIFVDLLWLVRSFXDANRWQELFPCLISSASTVDVICNGEGEN 262

Query: 447 RNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
            +GA+ LM AE+Q+L+P+V  RE+ F R CK+ +   WA+VDVSID   E +   +   C
Sbjct: 263 GDGAVHLMFAEIQMLTPMVATREMYFFRHCKKVSTYQWAIVDVSID---EDNIDASSQKC 319

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           R+ PSGC+++D  NG+ KVTWVEH E  +  +H LY+ ++  G+ FGA+ W+ TLQ+QCE
Sbjct: 320 RKRPSGCIIEDKSNGHCKVTWVEHIECQKIPIHSLYRSIVNKGLAFGARHWICTLQQQCE 379

Query: 567 CLAILMSTSVSARDHTGI 584
            L   ++T+V  +D +G+
Sbjct: 380 RLVFHVATNVPVKDSSGV 397


>gi|213950361|gb|ACJ54445.1| GL2a [Brassica rapa]
          Length = 750

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 212/558 (37%), Positives = 306/558 (54%), Gaps = 86/558 (15%)

Query: 53  STPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRR--SREDLLEHE 110
           S+ QP +K  F+SP LSL+L      N   G    +      E  +GRR    ED     
Sbjct: 8   SSKQP-TKDFFSSPALSLSLAGI-FRNASSGSTNPE------EDFLGRRVADDEDRTVEM 59

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKR-------------YHRHTPQQIQELESLFKECP 157
           S   S      S D+L+  D+   ++              YHRHT  QI+ +E+LFKE P
Sbjct: 60  SSENSGPTRSRSEDNLEGEDDQEEEEDGAGNKGNKRKRKKYHRHTTDQIRHMEALFKETP 119

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           HPDEKQR +LS++L L  RQVKFWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R+
Sbjct: 120 HPDEKQRQQLSEQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRE 179

Query: 218 AM---RNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
           +     +  C NCGG             L +EN +LK ELD++ A  G+          P
Sbjct: 180 SFSKANSSSCLNCGGGGG----GGSPDDLLLENTKLKAELDKLRAALGR---------TP 226

Query: 275 PPMPNS---SLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
            P+  S     +  VG++  + G+ +                                  
Sbjct: 227 YPLQASCSDDQQRRVGSLELYTGVFA---------------------------------- 252

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
              +E+S  +E+A  A  EL KMA + EPLW+RS E +GR++LN++EYL+ F        
Sbjct: 253 ---LEKSRIVEIANRATLELQKMATSGEPLWLRSLE-TGREILNYDEYLKEFPQDQTSSF 308

Query: 392 NGFVT-EASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR-NG 449
           +G  T EASR+ G+V +++  L ++ MD  +W EMF C+I++  T DVI  G G +R +G
Sbjct: 309 HGRKTIEASRDVGIVFMDAHKLAQSFMDVEQWKEMFACLISKAVTVDVIRQGEGPSRVDG 368

Query: 450 ALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNC 506
           A+QLM  E+Q+L+P+VP REV F+R C+Q +   WA+VDVS+ ++ E + A    + + C
Sbjct: 369 AIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKWAIVDVSV-SMEEDNNAEKEGSLLRC 427

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           R+ PSGC+++D  NG+SKVTWVEH +   S V  L++  + +G+ FGA+ WVATLQ  CE
Sbjct: 428 RKRPSGCIIEDTSNGHSKVTWVEHLDLSASTVQPLFRSFVNTGLAFGAKHWVATLQLHCE 487

Query: 567 CLAILMSTSVSARDHTGI 584
            L   M+T+V  +D  G+
Sbjct: 488 RLVFFMATNVPTKDSLGV 505


>gi|449448174|ref|XP_004141841.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 201/544 (36%), Positives = 294/544 (54%), Gaps = 77/544 (14%)

Query: 60  KSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGI------IGRRSREDLLEHESRS 113
           K++ +SP LSL L      N    D++    G   +         G RS EDL       
Sbjct: 15  KTLPSSPALSLTLAGV-FGNAAPMDVEADTTGRREDSCSDNSEPAGSRSAEDLGVDPDDE 73

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
             D + G +            KKR +RHT +QI+E+E LFKE PHPDEKQR +LS++L L
Sbjct: 74  DEDKLQGNT------------KKRKNRHTSEQIREMEMLFKESPHPDEKQRQQLSEKLGL 121

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN--CGGP- 230
             +Q+KFWFQNRRTQ+K   ERHEN+LL+ E +KLR EN ++R+ +    CT   C    
Sbjct: 122 SCKQIKFWFQNRRTQIKAIHERHENALLKGEMEKLREENQAMREMISKSSCTKGCCSAST 181

Query: 231 ----AIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
               AI      ++Q L  E ARLK E++R+     K+         P    N+  E G+
Sbjct: 182 NSLDAIFTTSDQQQQQLVTEIARLKAEVERLRTALDKY--------APAGTENNKEEGGI 233

Query: 287 GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS---GPGVTGLDRSIERSMFLEL 343
                                             P R+      + GL    E+   + +
Sbjct: 234 ER--------------------------------PGRNLEKSKSIFGL----EKGRVMLI 257

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
              A++E+VKM  +DEPLW+RS E +GR++LN++ Y++     +G +      EASRETG
Sbjct: 258 GKRAIEEVVKMGDSDEPLWVRSVE-TGRELLNYDVYMKEL--AVGNERGKREVEASRETG 314

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSP 463
           +V  +   LV++ MD  +W EMFP MI++ +T +V+ +G G  R+GA+QLM AELQ+L+P
Sbjct: 315 VVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTP 374

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
            +P RE+ F+R CKQ + G W V DVSID + +   + +   CR+ PSGC++QD  +G+ 
Sbjct: 375 TIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSS-SRCRKRPSGCIIQDQSDGHC 433

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           KVTWVEH E  +  +H +Y+ ++ SG+ FGA  W++TLQ  CE     M+T+V  +D TG
Sbjct: 434 KVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKDSTG 493

Query: 584 IYDI 587
           I  +
Sbjct: 494 ITTV 497


>gi|449519629|ref|XP_004166837.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Cucumis
           sativus]
          Length = 738

 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 201/544 (36%), Positives = 294/544 (54%), Gaps = 77/544 (14%)

Query: 60  KSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGI------IGRRSREDLLEHESRS 113
           K++ +SP LSL L      N    D++    G   +         G RS EDL       
Sbjct: 15  KTLPSSPALSLTLAGV-FGNAAPMDVEADTTGRREDSCSDNSEPAGSRSAEDLGVDPDDE 73

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
             D + G +            KKR +RHT +QI+E+E LFKE PHPDEKQR +LS++L L
Sbjct: 74  DEDKLQGNT------------KKRKNRHTSEQIREMEMLFKESPHPDEKQRQQLSEKLGL 121

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTN--CGGP- 230
             +Q+KFWFQNRRTQ+K   ERHEN+LL+ E +KLR EN ++R+ +    CT   C    
Sbjct: 122 SCKQIKFWFQNRRTQIKAIHERHENALLKGEMEKLREENQAMREMISKSSCTKGCCSAST 181

Query: 231 ----AIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
               AI      ++Q L  E ARLK E++R+     K+         P    N+  E G+
Sbjct: 182 NSLDAIFTTSDQQQQQLVTEIARLKAEVERLRTALDKY--------APAGTENNKEEGGI 233

Query: 287 GTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS---GPGVTGLDRSIERSMFLEL 343
                                             P R+      + GL    E+   + +
Sbjct: 234 ER--------------------------------PGRNLEKSKSIFGL----EKGRVMLI 257

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETG 403
              A++E+VKM  +DEPLW+RS E +GR++LN++ Y++     +G +      EASRETG
Sbjct: 258 GKRAIEEVVKMGDSDEPLWVRSVE-TGRELLNYDVYMKEL--AVGNERGKREVEASRETG 314

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSP 463
           +V  +   LV++ MD  +W EMFP MI++ +T +V+ +G G  R+GA+QLM AELQ+L+P
Sbjct: 315 VVFADLHRLVQSFMDVVQWKEMFPSMISKASTMEVVFNGDGNNRDGAVQLMFAELQMLTP 374

Query: 464 LVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYS 523
            +P RE+ F+R CKQ + G W V DVSID + +   + +   CR+ PSGC++QD  +G+ 
Sbjct: 375 TIPPREIFFIRSCKQLSPGKWVVADVSIDKVGDHVDSSS-SRCRKRPSGCIIQDQSDGHC 433

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           KVTWVEH E  +  +H +Y+ ++ SG+ FGA  W++TLQ  CE     M+T+V  +D TG
Sbjct: 434 KVTWVEHWECHKIGLHTIYRTIVNSGLIFGATHWMSTLQMHCEWQVFFMATNVPMKDSTG 493

Query: 584 IYDI 587
           I  +
Sbjct: 494 ITTV 497


>gi|414867888|tpg|DAA46445.1| TPA: outer cell layer4 isoform 1 [Zea mays]
 gi|414867889|tpg|DAA46446.1| TPA: outer cell layer4 isoform 2 [Zea mays]
          Length = 746

 Score =  331 bits (848), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 198/463 (42%), Positives = 275/463 (59%), Gaps = 46/463 (9%)

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAE 211
           LFKECPHPD+KQRL+LS+ L L+ RQVKFWFQNRRTQMK Q +R +N LLR EN+ L+++
Sbjct: 19  LFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVLLRAENESLKSD 78

Query: 212 NMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS 271
           N  ++ A+RN +C NCG  A++G++S EEQ LRIENARLKDELDR+  +A ++ G    S
Sbjct: 79  NYRLQAAIRNVVCPNCGHAAVLGEMSYEEQQLRIENARLKDELDRLACIATRYGGGRQPS 138

Query: 272 M---------GPPP--MPNSSLELGVGT--------INGFGGLSSTVTTTLPADFGTGIS 312
           M          PPP  MP   L++ V +        + G G L  +V          G  
Sbjct: 139 MSSSALVCLSAPPPVLMPPLDLDMNVYSRHFTDQSPVMGCGDLIQSVLGPPSQQITGGAE 198

Query: 313 NALPVVMPPNRSGPGVTGLDRSIE---RSMFLELALAAMDELVKMAQTDEPLWIRSFEGS 369
           +        + S P   G    ++   R + L+LA AA D L KM +  E LW+R   G+
Sbjct: 199 H--------HASTPSFMGAMAPVQEQDRQLVLDLAAAAADTLAKMCRAGESLWLRR-RGA 249

Query: 370 GRQVLNHEEYLRTFT-PCIG------LKPNGFV--TEASRETGMVIINSLALVETLMDPN 420
             +V+  +E+ R F+ P  G        P G    TE SR+  +VI+NS+ LV+  +D N
Sbjct: 250 SSEVMVADEHARMFSWPVNGGQQDSSASPGGAAARTEGSRDGTVVIMNSITLVDAFLDAN 309

Query: 421 RWAEMFPCMIARTATTDVISSGM--GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
           +W E+FP ++++  T  +I+ G   G   +G+L LM AELQ  SPLVP REV F R+C  
Sbjct: 310 KWMELFPSIVSKARTIQIINHGAASGHMGSGSLLLMQAELQFPSPLVPAREVVFFRYCVH 369

Query: 479 HA-EGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY--D 534
           +  EG W++VD   +  + E    P+ V C R PSGC++QDMPNGYS V WVEH E   +
Sbjct: 370 NGDEGTWSLVDFPAEGFQLEALQTPSVVRCCRRPSGCIIQDMPNGYSSVVWVEHTEIVGE 429

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           E  +HQ++K  + SG  FGA RWV+ LQRQCE LA  ++ +++
Sbjct: 430 EKPLHQVFKDYVASGSAFGATRWVSLLQRQCERLASELARNIA 472


>gi|15983360|gb|AAL11548.1|AF424554_1 At1g17920/F2H15_22 [Arabidopsis thaliana]
 gi|24111361|gb|AAN46804.1| At1g17920/F2H15_22 [Arabidopsis thaliana]
          Length = 406

 Score =  329 bits (844), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/411 (44%), Positives = 254/411 (61%), Gaps = 26/411 (6%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           D  + D  +      +KKR+HRHTP QIQ LES F EC HPDEKQR +LS+ L L  RQ+
Sbjct: 6   DSQNHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQI 65

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           KFWFQNRRTQ K Q ER +N  L++ENDK+R EN++IR+A+++ IC +CG   +  D   
Sbjct: 66  KFWFQNRRTQKKAQHERADNCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDSYF 125

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP--PPMPNSSLELGVGTINGFGGLS 296
           +EQ LRIENA+L+DEL+RV ++A KFLGRP+S + P   PM  S LEL            
Sbjct: 126 DEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLELF----------- 174

Query: 297 STVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQ 356
                +L  D   G  +++ V   P++    ++ +D    +S+   +A+ AM+EL+++ Q
Sbjct: 175 -HTGPSLDFDLLPGSCSSMSVPSLPSQPNLVLSEMD----KSLMTNIAVTAMEELLRLLQ 229

Query: 357 TDEPLWIRSFEGSGRQVLNHEEYLRTFT--PCIGLKPNGFVTEASRETGMVIINSLALVE 414
           T+EPLWI++     R VLN E Y   FT     G K N    EASR +G+V  N++ LV+
Sbjct: 230 TNEPLWIKT--DGCRDVLNLENYENMFTRSSTSGGKKNNLGMEASRSSGVVFTNAITLVD 287

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
            LM+  +  E+FP ++A + T  VISSG+ G    AL LM  ELQVLSPLV  RE   LR
Sbjct: 288 MLMNSVKLTELFPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLR 347

Query: 475 FCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKV 525
           +C+Q   G WA+V+VS +  +  S + ++    R PSGC++QDM NGYSKV
Sbjct: 348 YCQQIEHGTWAIVNVSYEFPQFISQSRSY----RFPSGCLIQDMSNGYSKV 394


>gi|197116133|dbj|BAG68844.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
          Length = 689

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 197/487 (40%), Positives = 272/487 (55%), Gaps = 78/487 (16%)

Query: 113 SGSDN------MDGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           SG+DN      +D ASG+ D D      R +R HRHT  QIQELE+ + E   P E QR 
Sbjct: 18  SGADNGESDHMIDAASGNNDQDGG----RMRRNHRHTAYQIQELENFYLENSLPTEDQRY 73

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           EL +RL +E +QVKFWFQN+R QMK   +R EN  LR+++D+L      +R AM + +C 
Sbjct: 74  ELGQRLNMEPKQVKFWFQNKRCQMKINSDRLENITLREDHDRLLVTQHQLRSAMLHSLCN 133

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP------- 278
            CG     GDI  E Q L +ENA+L+ E+D+  +   K    P   +  P  P       
Sbjct: 134 ICGRATHCGDIDYEMQILMVENAKLEREIDQYYS---KIRSHPNQMLVSPSQPAPHCSSS 190

Query: 279 ----NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRS 334
               N++ ELG+G     GG  +T                                    
Sbjct: 191 NPGINATPELGLG-----GGTRAT-----------------------------------E 210

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQV-LNHEEYLRTFTPCIGLKPNG 393
            ERSMFL LA+ A+ EL+++     P   +   GS + V L +E+Y       I  KP G
Sbjct: 211 KERSMFLNLAITALKELIELEAKHCPFG-KIDSGSSKAVSLIYEKYENASNNVI--KPPG 267

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
            V EASR+TG+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL
Sbjct: 268 HVVEASRDTGLVPMTCLTLVKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQL 327

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLP 510
           + AE Q++SPLVP R+V FLR+CK+  +G W VVDV+ D   T+    G+       RLP
Sbjct: 328 IQAEFQIISPLVPKRQVTFLRYCKELRQGFWVVVDVTPDQNPTLLSNGGS------NRLP 381

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SG  ++DM NGYSKVTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR C+ ++ 
Sbjct: 382 SGLFIEDMANGYSKVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCDSIST 441

Query: 571 LMSTSVS 577
           L ST+++
Sbjct: 442 LSSTNLA 448


>gi|197116193|dbj|BAG68836.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score =  328 bits (840), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 266/475 (56%), Gaps = 64/475 (13%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+++ E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENVYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +R EN +LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W ++F  ++   +T  VI +G GGT++G+LQ + AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           PLVP R+V FLR+CK+   G+W VVDV+ D   +     ++    RLPSG  + DM NGY
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPD---QNPTLLSYGGSNRLPSGLFIADMANGY 392

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           S+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 393 SQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 447


>gi|197116195|dbj|BAG68837.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. gemmifera]
          Length = 689

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 266/475 (56%), Gaps = 64/475 (13%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+++ E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENVYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +R EN +LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W ++F  ++   +T  VI +G GGT++G+LQ + AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           PLVP R+V FLR+CK+   G+W VVDV+ D   +     ++    RLPSG  + DM NGY
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPD---QNPTLLSYGGSNRLPSGLFIADMANGY 392

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           S+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 393 SQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 447


>gi|197116201|dbj|BAG68840.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 690

 Score =  327 bits (839), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 199/478 (41%), Positives = 266/478 (55%), Gaps = 69/478 (14%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+ + E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +R EN  LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMP 519
           PLVP R+V FLR+CK+   G+W VVDV+ D   T+    G+       RLPSG  ++DM 
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPDQNPTLLSDGGS-----INRLPSGLFIEDMA 390

Query: 520 NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 391 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 448


>gi|197116203|dbj|BAG68841.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kawasakiana]
          Length = 689

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 266/475 (56%), Gaps = 64/475 (13%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+++ E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENVYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +R EN +LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDRLENIILREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W ++F  ++   +T  VI +G GGT++G+LQ + AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDMEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           PLVP R+V FLR+CK+   G+W VVDV+ D   +     ++    RLPSG  + DM NGY
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPD---QNPTLLSYGGSNRLPSGLFIADMANGY 392

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           S+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 393 SQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 447


>gi|197116171|dbj|BAG68842.1| homeodomain-containing transcription factor FWA [Arabidopsis
           kamchatica]
          Length = 689

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 265/475 (55%), Gaps = 64/475 (13%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+ + E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +R EN  LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W ++F  ++   +T  VI +G GGT++G+LQ + AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGY 522
           PLVP R+V FLR+CK+   G+W VVDV+ D   +     ++    RLPSG  ++DM NGY
Sbjct: 336 PLVPRRQVTFLRYCKELRHGLWVVVDVTPD---QNPTLLSYGGSNRLPSGLFIEDMANGY 392

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           S+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 393 SQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 447


>gi|197116167|dbj|BAG68832.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 196/483 (40%), Positives = 263/483 (54%), Gaps = 78/483 (16%)

Query: 123 GDDLDAADNPP---------------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           GDD DA  N P               R +R HRHT  Q QELE+ + E P P E QR EL
Sbjct: 5   GDDFDAVGNIPNPSGAENGESDQDGGRMRRAHRHTAYQTQELENFYLENPLPTEDQRYEL 64

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNC 227
            +RL +E +QVKFWFQN+R Q+K   +R EN  LR+++D+L      +R AM +  C  C
Sbjct: 65  GQRLNMEPKQVKFWFQNKRNQIKINSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNIC 124

Query: 228 GGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PM 277
           G     GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P 
Sbjct: 125 GRATNCGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPG 181

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            N++ ELG+G     GG  +T                                     ER
Sbjct: 182 INATPELGLG-----GGTRTT-----------------------------------EKER 201

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTE 397
           SMFL+LA+ A+ EL+++ + D P        S    L +E+Y          KP G V E
Sbjct: 202 SMFLDLAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVE 259

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASRE G+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE
Sbjct: 260 ASREIGLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAE 319

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
            QV+SPLVP R+V FLR+CK+   G+W VVDV+ D   T+    G+       RLPSG  
Sbjct: 320 FQVISPLVPKRQVTFLRYCKELRHGLWVVVDVTPDQNPTLLSDGGS-----INRLPSGLF 374

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST 574
           ++DM NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST
Sbjct: 375 IEDMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSST 434

Query: 575 SVS 577
           +++
Sbjct: 435 NLA 437


>gi|197116175|dbj|BAG68845.1| homeodomain-containing transcription factor FWA [Turritis glabra]
          Length = 683

 Score =  326 bits (835), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 189/458 (41%), Positives = 257/458 (56%), Gaps = 56/458 (12%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D   +  R +R HRHT  QIQELE+ ++   HP E QR EL +RL +E +QVKFWFQN+R
Sbjct: 33  DNGQDGERMRRSHRHTAYQIQELENFYEHNSHPTEDQRYELGQRLNMEAKQVKFWFQNKR 92

Query: 187 TQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
           TQ+K   ER +N  L + +D++      +R AM    C  CG     GD+  E Q L +E
Sbjct: 93  TQVKINRERLQNRALIENHDRMLGAQDKLRCAMLRSSCNICGRATNCGDVDYEVQKLMVE 152

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGPP--PMPNSSLELGVGTINGFGGLSSTVTTTLP 304
           N RLK E+D   +    FL  P      P  P+P+ S   G                T  
Sbjct: 153 NNRLKREIDPYSS----FLYDPSRVQVSPSEPLPSCSSNPG-------------RNATPQ 195

Query: 305 ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLW-- 362
            D G G ++A                     E S FL+LA  AM EL+ + + D P W  
Sbjct: 196 LDLGCGSTSA-------------------KKEISKFLDLANTAMKELIVLGEPDCPFWTI 236

Query: 363 -IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
            +RS E S    L +E+Y   F   I  KP G V EASR+TG+V + S  LV+TLMD  +
Sbjct: 237 DLRSKEVS----LVYEKYRGVFNNII--KPPGCVVEASRDTGLVPMTSSTLVKTLMDTGK 290

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W  +F  ++  ++T  VI +G GG ++G+LQ + AE QV+SPLVP R+V FLR+CK+   
Sbjct: 291 WVNVFASIVPVSSTHKVIRTGYGGVKSGSLQQIQAEFQVISPLVPKRQVTFLRYCKELKH 350

Query: 482 GVWAVVDVSIDTIRETSGAPAFVN---CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           G+W VVDV+       +  P F++     RLPSG +++D+ NGYSKVTW+E AEY+ES +
Sbjct: 351 GLWVVVDVT------PAEYPTFLSYGASNRLPSGLIIEDIANGYSKVTWIEQAEYNESHI 404

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           HQLY+PLI SG+G GA+RW  TLQR C  L+ L ST++
Sbjct: 405 HQLYQPLIGSGIGLGAKRWFKTLQRYCGSLSTLTSTNL 442


>gi|197116197|dbj|BAG68838.1| homeodomain-containing transcription factor FWA [Arabidopsis
           halleri subsp. halleri]
          Length = 671

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/473 (41%), Positives = 261/473 (55%), Gaps = 63/473 (13%)

Query: 116 DNMDGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           D +D  SGD D D      R +R HRHT  Q QELE+ + E P P E QR EL +RL +E
Sbjct: 9   DMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRLNME 64

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            +QVKFWFQN+R QMK   +R EN  LR+++D+L      +R AM    C  CG     G
Sbjct: 65  PKQVKFWFQNKRNQMKINSDRLENITLREDHDRLLLTQHQLRSAMLYCSCNICGRATNCG 124

Query: 235 DISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSLEL 284
           DI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ EL
Sbjct: 125 DIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATPEL 181

Query: 285 GVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
           G+G     GG  +T                                     ERSMFL+LA
Sbjct: 182 GLG-----GGTRTT-----------------------------------EKERSMFLDLA 201

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           + A+ EL+++ + D P        S    L +E+Y          KP G V EASRE G+
Sbjct: 202 IKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREIGL 259

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           V +  L LV+T MD  +W ++F  ++   +T  VI +G GGT++G+LQ + AE QV+SPL
Sbjct: 260 VPMTCLTLVKTFMDTEKWVDVFASIVPVASTRKVIPTGSGGTKSGSLQQIQAEFQVISPL 319

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           VP R+V FLR+CK+   G+W VVDV+ D   +     ++    RLPSG  + DM NGYS+
Sbjct: 320 VPKRQVTFLRYCKELRHGLWVVVDVTPD---KNPTLLSYGGSNRLPSGLFIADMANGYSQ 376

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 377 VTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 429


>gi|197116169|dbj|BAG68833.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 198/478 (41%), Positives = 265/478 (55%), Gaps = 69/478 (14%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+ + E P P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENPLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R Q K   +R EN  LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQTKINSDRLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMP 519
           PLVP R+V FLR+CK+   G+W VVDV+ D   T+    G+       RLPSG  ++DM 
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPDQNPTLLSDGGS-----INRLPSGLFIEDMA 390

Query: 520 NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 391 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 448


>gi|197116191|dbj|BAG68835.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 264/478 (55%), Gaps = 69/478 (14%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+ + E   P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENTLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +  EN  LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDHLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMP 519
           PLVP R+V FLR+CK+   G+W VVDV+ D   T+    G+       RLPSG  ++DM 
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPDQNPTLLSDGGS-----INRLPSGLFIEDMA 390

Query: 520 NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 391 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 448


>gi|197116189|dbj|BAG68834.1| homeodomain-containing transcription factor FWA [Arabidopsis lyrata
           subsp. petraea]
          Length = 690

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 264/478 (55%), Gaps = 69/478 (14%)

Query: 115 SDNM-DGASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           SD+M D  SGD D D      R +R HRHT  Q QELE+ + E   P E QR EL +RL 
Sbjct: 25  SDHMIDATSGDNDQDGG----RMRRAHRHTAYQTQELENFYLENTLPTEDQRYELGQRLN 80

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +QVKFWFQN+R QMK   +  EN  LR+++D+L      +R AM +  C  CG    
Sbjct: 81  MEPKQVKFWFQNKRNQMKINSDHLENITLREDHDRLLLTQHQLRSAMLHCSCNICGRATN 140

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP----VSSMGPP------PMPNSSL 282
            GDI  E Q L +EN  L+ E+++   L  K   RP    VS   PP      P  N++ 
Sbjct: 141 CGDIDYEVQKLIVENTILEREINQ---LYSKIPSRPNQMLVSPSQPPHCSSSNPGINATP 197

Query: 283 ELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLE 342
           ELG+G     GG  +T                                     ERSMFL+
Sbjct: 198 ELGLG-----GGTRTT-----------------------------------EKERSMFLD 217

Query: 343 LALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRET 402
           LA+ A+ EL+++ + D P        S    L +E+Y          KP G V EASRE 
Sbjct: 218 LAIKALKELLELGEMDCPFGKIDSRSSKAVSLINEKYKNASNNVT--KPPGHVVEASREI 275

Query: 403 GMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLS 462
           G+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE QV+S
Sbjct: 276 GLVPMTCLTLVKTFMDTEKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEFQVIS 335

Query: 463 PLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMP 519
           PLVP R+V FLR+CK+   G+W VVDV+ D   T+    G+       RLPSG  ++DM 
Sbjct: 336 PLVPKRQVTFLRYCKELRHGLWVVVDVTPDQNPTLLSDGGS-----INRLPSGLFIEDMA 390

Query: 520 NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR CE L+ L ST+++
Sbjct: 391 NGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCESLSTLSSTNLA 448


>gi|197116199|dbj|BAG68839.1| homeodomain-containing transcription factor FWA [Arabidopsis
           arenosa]
          Length = 689

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 262/482 (54%), Gaps = 68/482 (14%)

Query: 113 SGSDNMDGASGDDLDAADNPP---RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           SG++N +G    D  + +N       +R HRHT  Q QELE+ + E   P E QR EL +
Sbjct: 18  SGAENGEGDHMIDATSGNNDQDGGSMRRNHRHTAYQTQELENFYLENSLPTEDQRYELGQ 77

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
           RL +E +QVKFWFQN+R QMK   +R EN  LR+++D+L      +R AM    C  CG 
Sbjct: 78  RLNMEPKQVKFWFQNKRCQMKINSDRLENITLREDHDRLLVTQHQLRSAMLQSSCNICGR 137

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMP----------- 278
               GDI  E Q L +ENA+L+ E+D+  +   K    P   +  P  P           
Sbjct: 138 ATHCGDIDYEVQILMVENAKLEREIDQYYS---KIRSHPNQMLVSPSQPAPHCSSSNPGI 194

Query: 279 NSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
           N++ ELG+G     GG  +T                                     ERS
Sbjct: 195 NATPELGLG-----GGTRAT-----------------------------------EKERS 214

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
           MFL LA+ A+ EL+++     P        S    L +E+Y       I  KP G V EA
Sbjct: 215 MFLNLAITALKELIELEAKHRPFGKIDSRSSKAVSLIYEKYENASNNVI--KPPGHVVEA 272

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           SR+TG+V +  L LV+T MD  +W  +F  ++   +T  VI +G GGT++G+LQL+ AE 
Sbjct: 273 SRDTGLVPMTCLTLVKTFMDTGKWVNVFAPIVPVASTRKVIPTGSGGTKSGSLQLIQAEF 332

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVV 515
           Q++SPLVP R+V FLR+CK+  +G W VVDV+ D   T+    G+       RLPSG  +
Sbjct: 333 QIISPLVPKRQVTFLRYCKELRQGFWVVVDVTPDQNPTLLSDGGS------NRLPSGVFI 386

Query: 516 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           +DM NGYS+VTW+E AEY+ES +H LY+PLI SG+G GA RW+ATLQR C+ ++ L ST+
Sbjct: 387 EDMANGYSQVTWIEQAEYNESHIHPLYQPLIGSGIGLGATRWLATLQRHCDSISTLSSTN 446

Query: 576 VS 577
           ++
Sbjct: 447 LA 448


>gi|317468130|gb|ADV30318.1| GLABRA2 [Mimulus guttatus]
          Length = 382

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 175/424 (41%), Positives = 250/424 (58%), Gaps = 54/424 (12%)

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KE PHPDE QRL+LSK+L L  RQVKFWFQNRRTQ+K   ERHENS+L+ E DKLR EN 
Sbjct: 1   KESPHPDENQRLQLSKQLGLHPRQVKFWFQNRRTQIKAIQERHENSVLKTEMDKLRDENK 60

Query: 214 SIRDAMRNPICTNCGGPAIIG------DISLEEQHLRIENARLKDELDRVCALAGK--FL 265
            +R+ +++P C NCG              + EEQ LRIENA LK E++++ ++ GK    
Sbjct: 61  VLRETLKSPSCPNCGFATTTSGGKESVTXATEEQRLRIENANLKTEVEKLRSIIGKSPHG 120

Query: 266 GRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSG 325
             P +S   PP          G IN     SS        DF T                
Sbjct: 121 TSPNTSSCSPP----------GNINDQENRSS-------FDFNTS--------------- 148

Query: 326 PGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF-- 383
                 +  +E+S   +   +A++EL+KMA   EPLW+ S+E +GR +LN++EY + F  
Sbjct: 149 ------NFGMEKSRVKDTVNSALNELIKMATHREPLWVPSYE-TGRVILNYDEYTKEFGN 201

Query: 384 -TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSG 442
                 ++PN  + EASR++ ++ ++ L LV + MD NRW E+FPC+I+  +T DVI +G
Sbjct: 202 ENYSNKMQPNKSI-EASRDSAIIFVDLLWLVRSFMDANRWQELFPCLISDASTVDVICNG 260

Query: 443 MGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA 502
                +GA+ LM AE+Q+L+P+V  RE+ F R CK+ +   WA+VDVSID   E +   +
Sbjct: 261 EXENGDGAIYLMFAEIQMLTPMVATREMYFFRHCKKVSANQWAIVDVSID---EDNIDAS 317

Query: 503 FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
              CR+ PSGC+++D  NG+ KVTWVEH E  +  +H LY+ ++ +G+ FGA+  + TLQ
Sbjct: 318 SQKCRKRPSGCIIEDKSNGHCKVTWVEHIECQKIPIHSLYRSIVNTGLAFGARHGICTLQ 377

Query: 563 RQCE 566
           +QCE
Sbjct: 378 QQCE 381


>gi|147820899|emb|CAN60897.1| hypothetical protein VITISV_008020 [Vitis vinifera]
          Length = 461

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/438 (40%), Positives = 270/438 (61%), Gaps = 41/438 (9%)

Query: 110 ESRSGSDNMDGASGDDLDAADNPPR-KKRYHRHTPQQIQELESLFKECPHPDEKQRLELS 168
           E R+G +     SG D D   NP R +K Y+RHTPQQIQ LE+ FK+CPHPDE QR +L 
Sbjct: 2   EFRTGGN----GSGGDQDGP-NPRRGRKVYNRHTPQQIQRLEAFFKDCPHPDEAQRRQLG 56

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCG 228
           + L LE+RQ+KFWFQN+RTQ KTQ ER +N+ LR EN++++ EN++IR+A++N IC +CG
Sbjct: 57  RELGLESRQIKFWFQNKRTQTKTQHERADNTALRAENERIQCENLAIREALKNVICPSCG 116

Query: 229 GPAIIGDISLEE--QHLRIENARLKDELDRVCALAGKFLGRPVSSMG-PPPMPNSSLELG 285
           GP   G+   +   + L++ENA+LK+E ++V  L  K++G+P++ M   PP   SSL+  
Sbjct: 117 GPP-FGEXERQRNIEKLQLENAQLKEEHEKVSNLLAKYIGKPITQMHLLPPALGSSLDFS 175

Query: 286 VGTI--NGFGGLS-STVTTTLPADFG-TGISNALPVVMPPNRSGPGVTGLDRSIERSMFL 341
            G+      GGLS  TV   L  +     + NA   VM   +  P        +E+++  
Sbjct: 176 PGSFPSQETGGLSIPTVGPALGLELAPVDVCNA--SVMYQFKGFP-------DMEKTLMT 226

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRE 401
           E A  AMDEL+++ + +EPLW++S   + + VL+H+ Y R F      K +    E+S+E
Sbjct: 227 ETAAGAMDELIRLVRINEPLWVKS-ATNEKYVLHHDSYERIFPKATHFKSSNARXESSKE 285

Query: 402 TGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL-------- 453
           + +V +N + LV   +DPN++ ++FP ++ + +T  V+ +G+ G+R+G+LQL        
Sbjct: 286 SVVVAMNGMQLVNMFLDPNKYVDLFPTIVTKASTIQVLEAGIIGSRSGSLQLFCPGKKFS 345

Query: 454 -------MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNC 506
                  M+ ++ +LSPLV  RE  FLR+C+Q   GVW +VDVS D  ++  G P  +  
Sbjct: 346 KSKVLMQMYEQMHILSPLVAPREFYFLRYCQQIELGVWVMVDVSYDYSKD--GQPNSLRF 403

Query: 507 RRLPSGCVVQDMPNGYSK 524
            +LPSGC++QD+P+G SK
Sbjct: 404 WKLPSGCMIQDLPDGCSK 421


>gi|9957277|gb|AAG09302.1| homeobox protein [Arabidopsis thaliana]
 gi|13506820|gb|AAK28350.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116135|dbj|BAG68819.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116141|dbj|BAG68822.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116143|dbj|BAG68823.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116147|dbj|BAG68825.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116149|dbj|BAG68826.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116161|dbj|BAG68829.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  VIS+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|197116151|dbj|BAG68827.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 181/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L RP   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSRPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  VI +G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVIPTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|197116163|dbj|BAG68830.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTTEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  V+S+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|197116139|dbj|BAG68821.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 261/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            G+   E Q L  ENA L+ E+D+      ++L RP   +       P+SS   G+    
Sbjct: 139 CGNTEYEVQKLMAENANLEREIDQ---FNSRYLSRPKQRLVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  VIS+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVISTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|18416569|ref|NP_567722.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
 gi|187608874|sp|Q9FVI6.2|FWA_ARATH RecName: Full=Homeobox-leucine zipper protein HDG6; AltName:
           Full=HD-ZIP protein HDG6; AltName: Full=Homeobox protein
           FWA; AltName: Full=Homeodomain GLABRA 2-like protein 6;
           AltName: Full=Homeodomain transcription factor HDG6;
           AltName: Full=Protein HOMEODOMAIN GLABROUS 6
 gi|197116099|dbj|BAG68818.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116131|dbj|BAG68843.1| homeodomain-containing transcription factor FWA [Arabidopsis
           suecica]
 gi|197116137|dbj|BAG68820.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116145|dbj|BAG68824.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|197116153|dbj|BAG68828.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
 gi|332659674|gb|AEE85074.1| homeobox-leucine zipper protein HDG6 [Arabidopsis thaliana]
          Length = 686

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  V+S+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|197116165|dbj|BAG68831.1| homeodomain-containing transcription factor FWA [Arabidopsis
           thaliana]
          Length = 686

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  V+S+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|7446302|pir||T05794 homeotic protein homolog M7J2.100 - Arabidopsis thaliana
 gi|2980797|emb|CAA18173.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 690

 Score =  311 bits (796), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 260/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE+ + E PHP E+QR EL +RL 
Sbjct: 19  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELENFYMENPHPTEEQRYELGQRLN 78

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 79  MGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 138

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 139 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 191

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 192 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 221

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 222 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 279

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  V+S+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 280 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPK 339

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 340 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 396

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 397 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 446


>gi|7269403|emb|CAB81363.1| putative homeodomain-protein [Arabidopsis thaliana]
          Length = 689

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 259/470 (55%), Gaps = 55/470 (11%)

Query: 121 ASGDDLDAADNPP--------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           A GD++D  ++          R +R HR T  Q QELE  + E PHP E+QR EL +RL 
Sbjct: 18  AEGDEIDMINDMSGVNDQDGGRMRRTHRRTAYQTQELEKFYMENPHPTEEQRYELGQRLN 77

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +   QVK WFQN+R   K   +  EN  LR+E+D+L A    +R AM   +C  CG    
Sbjct: 78  MGVNQVKNWFQNKRNLEKVNNDHLENVTLREEHDRLLATQDQLRSAMLRSLCNICGKATN 137

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSM--GPPPMPNSSLELGVGTIN 290
            GD   E Q L  ENA L+ E+D+      ++L  P   M       P+SS   G+    
Sbjct: 138 CGDTEYEVQKLMAENANLEREIDQ---FNSRYLSHPKQRMVSTSEQAPSSSSNPGI---- 190

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--SMFLELALAAM 348
                                 NA PV+          +G  R+ E+  S+FL LA+ A+
Sbjct: 191 ----------------------NATPVL--------DFSGGTRTSEKETSIFLNLAITAL 220

Query: 349 DELVKMAQTDEPLWIRSFEGSGRQVLN-HEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            EL+ + + D P W+       + V   +E+Y  +F      KP G + EASR  G+V +
Sbjct: 221 RELITLGEVDCPFWMIDPIVRSKGVSKIYEKYRSSFNNVT--KPPGQIVEASRAKGLVPM 278

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
             + LV+TLMD  +W  +F  ++   +T  V+S+G GGT++G+LQ + AE QV+SPLVP 
Sbjct: 279 TCVTLVKTLMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQVQAEFQVISPLVPK 338

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           R+V F+R+CK+  +G+W VVDV   T  +      +   +RLPSG ++ D+ NGYS+VTW
Sbjct: 339 RKVTFIRYCKEIRQGLWVVVDV---TPTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTW 395

Query: 528 VEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           +E AEY+ES +HQLY+PLI  G+G GA+RW+ATLQR CE L+ L ST+++
Sbjct: 396 IEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLT 445


>gi|30684155|ref|NP_193506.2| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
 gi|75329764|sp|Q8L7H4.1|HDG4_ARATH RecName: Full=Homeobox-leucine zipper protein HDG4; AltName:
           Full=HD-ZIP protein HDG4; AltName: Full=Homeodomain
           GLABRA 2-like protein 4; AltName: Full=Homeodomain
           transcription factor HDG4; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 4
 gi|22136630|gb|AAM91634.1| putative GLABRA2 protein [Arabidopsis thaliana]
 gi|332658537|gb|AEE83937.1| homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
          Length = 709

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 178/450 (39%), Positives = 252/450 (56%), Gaps = 64/450 (14%)

Query: 132 PP--RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP  +KKRYHRHT  QIQ++E+LFKE  HPD K RL LSK+L L   QVKFWFQN+RTQ+
Sbjct: 84  PPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQI 143

Query: 190 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENAR 249
           K Q  R +N+ L+ EN+ L+ E+ +I+   +   C+ CG             +LR+ENAR
Sbjct: 144 KAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG------------HNLRLENAR 191

Query: 250 LKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGT 309
           L+ ELDR+ ++        VS   P P                   S  +T         
Sbjct: 192 LRQELDRLRSI--------VSMRNPSP-------------------SQEIT--------- 215

Query: 310 GISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS 369
                     P          L    E+++ +ELA++   EL KM   +EPLW +    +
Sbjct: 216 ----------PETNKNNNDNMLIAEEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDN 265

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
               LN EEY + F   +    + F  EASR   ++++N + LV+  +D ++W+EMF  +
Sbjct: 266 ESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPI 325

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHA-EGVWAVVD 488
           ++   T  +ISSG  G  +G L LM AELQV+SPLVP RE  FLR+ +Q+A EG W VVD
Sbjct: 326 VSSAKTAQIISSGASGP-SGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVD 384

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH-QLYKPLII 547
             ID I+  S A      RR PSGC++Q M NGYS+VTWVEH E +E  V  ++ +  + 
Sbjct: 385 FPIDRIKPAS-ATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVE 443

Query: 548 SGMGFGAQRWVATLQRQCECLAILMSTSVS 577
           SG+ FGA+RW++ L+RQCE +A LM+T+++
Sbjct: 444 SGVAFGAERWLSVLKRQCERMASLMATNIT 473


>gi|357480751|ref|XP_003610661.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355511996|gb|AES93619.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 735

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 193/502 (38%), Positives = 279/502 (55%), Gaps = 66/502 (13%)

Query: 117 NMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           NM+  S DD ++ +   RK+ Y RHT QQI E+++ FK+CP+P++ QR ELS R  L+  
Sbjct: 17  NMEAPSSDDQES-NQRRRKRTYRRHTQQQIDEMDTFFKQCPNPNDAQRRELSLRTGLDPT 75

Query: 177 QVKFWFQNRRTQMK--------------------------TQLERHENSLLRQENDKLRA 210
           Q+KFWFQNRRT +K                           Q +R EN LL+ EN+KLR 
Sbjct: 76  QIKFWFQNRRTSLKHDNVIFTVIYIALQWRPDAVANIAATVQTDRDENELLKIENEKLRD 135

Query: 211 ENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR-PV 269
           E    + A+ +  C  CG  +  G++S EEQ LR+ENA L+ EL+R       F+G  P 
Sbjct: 136 ELDRYKGAI-STTCKVCGSSSNAGEMSHEEQQLRLENALLRKELER-------FVGETPT 187

Query: 270 SSMGPPPMPNSSLELG-----VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS 324
            S       N+S  +       G   G  G S  +        G G+S           S
Sbjct: 188 DSRANITSSNNSTHVASHSTDFGVAGGNNGASHRMV-------GEGLSVG--------GS 232

Query: 325 GPGVTGLDRSIERSMFLELALAAMDELVKMAQT-DEPLWIRSFEGSGRQVLNHEEYLRTF 383
              + GL+   E+   +ELA+  MDEL K+A+T   PLWI +      ++LN EEY++ F
Sbjct: 233 SVQIKGLN---EKQKIVELAVVGMDELTKLARTYGPPLWIPT--NYVTEILNGEEYMKYF 287

Query: 384 TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGM 443
               G    G   E S+E+ +V+IN+  LV+ LMD N+W+ MF  +++R AT +V+S+G+
Sbjct: 288 PRGNGPNTCGLRLEGSKESVVVMINAPDLVDILMDVNQWSNMFCGIVSRAATLEVLSTGV 347

Query: 444 GGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR----ETSG 499
           GG  +GALQ+M AE QV SP VP R+ +F+R+CK H +G+W V DVS+  +      +S 
Sbjct: 348 GGNYDGALQVMTAEFQVPSPHVPTRQNHFVRYCKLHPDGIWVVADVSLHLLNAASASSSS 407

Query: 500 APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVA 559
           +       R PSGC+++ +PNG +KVTW+E+ E D+  V  +YKPL+ SG+ FGA+RWVA
Sbjct: 408 SSTASRTNRRPSGCLIETLPNGLTKVTWIENVEVDDQVVQNIYKPLVNSGLAFGAKRWVA 467

Query: 560 TLQRQCECLAILMSTSVSARDH 581
           TL RQ + L    +T+V    H
Sbjct: 468 TLHRQSDRLFFRTATNVPREHH 489


>gi|218189094|gb|EEC71521.1| hypothetical protein OsI_03822 [Oryza sativa Indica Group]
          Length = 759

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 199/551 (36%), Positives = 288/551 (52%), Gaps = 79/551 (14%)

Query: 55  PQPLSKSMFNSPGLSLAL-----QQPNIDNQGG-----GDLQLQRMGESFEGIIGRRSRE 104
           P+P +K  F +P LSL L     ++      GG     GD ++Q  GE+   I    +  
Sbjct: 6   PRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGEAAVEISSENAGP 65

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
              + +S  GS    G   DD + ++   R+K YHRHT +QI+ +E+LFKE PHPDE+QR
Sbjct: 66  GCSQSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQR 125

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI- 223
                                  Q   Q ERHENSLL+ E +KL+ E+ ++R+  + P  
Sbjct: 126 -----------------------QQAVQ-ERHENSLLKSELEKLQDEHRAMRELAKKPSR 161

Query: 224 CTNCGGPAI-------IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           C NCG  A               EQ LR+ENA+LK E++R+    GK     V+S   PP
Sbjct: 162 CLNCGVVATSSDAVAAATAADTREQRLRLENAKLKAEIERLRGTPGKSAADGVAS---PP 218

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
              S+           G + +   +    D   G                    L    +
Sbjct: 219 CSASA-----------GAMQTNSRSPPLHDHDGGF-------------------LRHDDD 248

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN---G 393
           +   LELA  A+DELV M  + EP+W+R  E +GR +LN++EY+R F    G   +   G
Sbjct: 249 KPRILELATRALDELVGMCSSGEPVWVRGVE-TGRDILNYDEYVRLFRRDHGGSGDQMAG 307

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           +  EASRE G+V ++++ LV T MD ++W ++FP MI++ AT ++IS+     R+G LQL
Sbjct: 308 WTVEASRECGLVYLDTMQLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQL 367

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M+AELQ L+P+VP RE+ F R+CK+ A   WA+VDVS D       A + V C + PSGC
Sbjct: 368 MYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWKNPSGC 427

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           ++++  NG  K+TWVEH       V  LY+ +  SG+ FGA+RWVA LQ QCE +   ++
Sbjct: 428 LIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVA 487

Query: 574 TSVSARDHTGI 584
           T+V  RD TG+
Sbjct: 488 TNVPTRDSTGV 498


>gi|326531178|dbj|BAK04940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  301 bits (771), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 142/208 (68%), Positives = 168/208 (80%), Gaps = 6/208 (2%)

Query: 377 EEYLRTFTPCIGLKPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTAT 435
           EEYL +   CIG+KP GFV+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+   
Sbjct: 1   EEYLHSSQHCIGMKPAGFVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATI 60

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI- 494
            + +S+G+GGTRNGAL LM AELQVLSPLVP+REV FLRFCKQ AEG WAVVDVSID + 
Sbjct: 61  LEEVSNGIGGTRNGALLLMKAELQVLSPLVPIREVIFLRFCKQLAEGAWAVVDVSIDGLL 120

Query: 495 ----RETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
                 T+ A A + CRRLPSGCV+QD PNGY KVTWVEH EYDE+ VHQ Y+PL+ SG+
Sbjct: 121 SNQNSATTSAGANLKCRRLPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQFYRPLLRSGL 180

Query: 551 GFGAQRWVATLQRQCECLAILMSTSVSA 578
            FGA RW+ATLQRQCECLAILMS++ ++
Sbjct: 181 AFGASRWLATLQRQCECLAILMSSATAS 208


>gi|125572100|gb|EAZ13615.1| hypothetical protein OsJ_03531 [Oryza sativa Japonica Group]
          Length = 759

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/551 (35%), Positives = 287/551 (52%), Gaps = 79/551 (14%)

Query: 55  PQPLSKSMFNSPGLSLAL-----QQPNIDNQGG-----GDLQLQRMGESFEGIIGRRSRE 104
           P+P +K  F +P LSL L     ++      GG     GD ++Q  GE+   I    +  
Sbjct: 6   PRPRTKDFFAAPALSLTLAGVFGRKNGPAASGGDGVEEGDEEVQAAGEAAVEISSENAGP 65

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
              + +S  GS    G   DD + ++   R+K YHRHT +QI+ +E+LFKE PHPDE+QR
Sbjct: 66  GCRQSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQR 125

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI- 223
                                  Q   Q ERHENSLL+ E +KL+ E+ ++R+  + P  
Sbjct: 126 -----------------------QQAVQ-ERHENSLLKSELEKLQDEHRAMRELAKKPSR 161

Query: 224 CTNCG-------GPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPP 276
           C NCG         A        EQ LR+E A+LK E++R+    GK     ++S   PP
Sbjct: 162 CLNCGVVATSSDAAAAATAADTREQRLRLEKAKLKAEIERLRGTPGKSAADGIAS---PP 218

Query: 277 MPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIE 336
              S+           G + +   +    D   G                    L    +
Sbjct: 219 CSASA-----------GAMQTNSRSPPLHDHDGGF-------------------LRHDDD 248

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN---G 393
           +   LELA  A+DELV M  + EP+W+R  E +GR +LN++EY+R F    G   +   G
Sbjct: 249 KPRILELATRALDELVGMCSSGEPVWVRGVE-TGRDILNYDEYVRLFRRDHGGSGDQMAG 307

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
           +  EASRE G+V ++++ LV T MD ++W ++FP MI++ AT ++IS+     R+G LQL
Sbjct: 308 WTVEASRECGLVYLDTMHLVHTFMDVDKWKDLFPTMISKAATLEMISNREDDGRDGVLQL 367

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M+AELQ L+P+VP RE+ F R+CK+ A   WA+VDVS D       A + V C + PSGC
Sbjct: 368 MYAELQTLTPMVPTRELYFARYCKKLAAERWAIVDVSFDESETGVHASSAVRCWKNPSGC 427

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMS 573
           ++++  NG  K+TWVEH       V  LY+ +  SG+ FGA+RWVA LQ QCE +   ++
Sbjct: 428 LIEEQNNGRCKMTWVEHTRCRRCTVAPLYRAVTASGVAFGARRWVAALQLQCERMVFAVA 487

Query: 574 TSVSARDHTGI 584
           T+V  RD TG+
Sbjct: 488 TNVPTRDSTGV 498


>gi|356532433|ref|XP_003534777.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 675

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 172/463 (37%), Positives = 259/463 (55%), Gaps = 36/463 (7%)

Query: 120 GASGDDL--DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           G SGDD    + +   +   Y RH   Q   LE LF++CP+PDE +R +++K L LE +Q
Sbjct: 9   GGSGDDQHNQSLNKGKKTTTYRRHKEDQRTRLEELFRKCPNPDEIERRQIAKDLGLEPKQ 68

Query: 178 VKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA-IIGDI 236
           VKFWFQN+RTQ KT  ER +N++LR EN+++  EN+ +R+A++  IC +CGGP       
Sbjct: 69  VKFWFQNKRTQKKTISERVDNNVLRVENERMHNENLVLREALKTIICPSCGGPHNEEERR 128

Query: 237 SLEEQHLRIENARLKDELDRVCALAGKFLGRPV------------SSMGPPPMPNSSLEL 284
            L  + LR+ENARLK + +++     + + +P+            SS G  P+  SSL L
Sbjct: 129 ELCLEQLRLENARLKAQHEKLSKFLVQHMDKPILEQNLDSPIRGSSSHG--PLLGSSLRL 186

Query: 285 GVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELA 344
             G      G +ST   +   +  T  S A   ++               +E++M   +A
Sbjct: 187 RAGRSRMNLG-ASTSHDSFQDEEDTMSSQAGSKIIT-------------QMEKTMMAHIA 232

Query: 345 LAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM 404
           +AA DEL+K+ +T+EPLW++S     R VL+ E Y   F      K +    E+S+++ +
Sbjct: 233 VAAKDELLKLLRTNEPLWVKS-STDQRYVLHLECYETIFPRINHFKNSKARVESSKDSRI 291

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           V I +  LV+ L++   W  +F  ++ +  T  V+ +G    R+G L LM  E+ VLSPL
Sbjct: 292 VRIKAKELVDMLLNSEIWENLFSRIVTKARTIQVLENGSLENRSGVLLLMREEMHVLSPL 351

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           VP RE  FLR+C Q    VW + DVS+D ++E +  P   NC R PSGC++Q + NG  +
Sbjct: 352 VPSREFYFLRYCHQVEANVWVIADVSVDCMKENNHDP---NCWRFPSGCMIQGISNGMCQ 408

Query: 525 VTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           V+WVEH E DE  Q H L+K L+   + +GA+RW+  LQR CE
Sbjct: 409 VSWVEHVEVDEKIQTHHLFKDLVNRNIAYGAERWLLELQRMCE 451


>gi|222640035|gb|EEE68167.1| hypothetical protein OsJ_26285 [Oryza sativa Japonica Group]
          Length = 577

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 160/343 (46%), Positives = 219/343 (63%), Gaps = 24/343 (6%)

Query: 236 ISLEEQHLRIENARLKDELDRVCALAGKFLGRP-VSSMGPPPMPNSSLELGVG-TINGFG 293
           +S +E HLR+ENARL+DE+DR+  +A K +G+P + S    P+ +S L +    +     
Sbjct: 1   MSFDEHHLRVENARLRDEIDRISGIAAKHVGKPPIVSF---PVLSSPLAVAAARSPLDLA 57

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
           G    VT  L  D   G  + L  V P +   P            M +ELA+AAMDELV+
Sbjct: 58  GAYGVVTPGL--DMFGGAGDLLRGVHPLDADKP------------MIVELAVAAMDELVQ 103

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
           MAQ DEPLW  S E +   +L+ EEY R F   +G K  G  +EASR   +VI+    LV
Sbjct: 104 MAQLDEPLWSSSSEPAA-ALLDEEEYARMFPRGLGPKQYGLKSEASRHGAVVIMTHSNLV 162

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           E LMD N++A +F  +++R +T +V+S+G+ G  NGALQ+M  E QV SPLVP RE  F+
Sbjct: 163 EILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVMSMEFQVPSPLVPTRESYFV 222

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           R+CK +++G WAVVDVS+D++R +        CRR PSGC++Q+MPNGYSKVTWVEH E 
Sbjct: 223 RYCKNNSDGTWAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNGYSKVTWVEHVEV 278

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++++
Sbjct: 279 DDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNI 321


>gi|242048284|ref|XP_002461888.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
 gi|241925265|gb|EER98409.1| hypothetical protein SORBIDRAFT_02g009860 [Sorghum bicolor]
          Length = 730

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 172/474 (36%), Positives = 249/474 (52%), Gaps = 60/474 (12%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           +G + +D          KR  RHTP+QI+EL S +++  HPDE  R  L +++ LE +QV
Sbjct: 23  EGYNNEDYTQETETAASKRQKRHTPEQIRELISAYQQNHHPDEPTRRALGEKIGLEAKQV 82

Query: 179 KFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           ++WFQN+R+QM+ +   H +   +++N  L AEN S+R AM    C  CGG  +  ++  
Sbjct: 83  QYWFQNQRSQMQAKAMEHNSKAAQRQNAALLAENASLRQAMLKRSCFTCGGATVPAELLA 142

Query: 239 EEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP----PPMPNSSLELGVGTINGFGG 294
           E   L +ENARL+ +  R   L  + + +  ++ GP    PP                  
Sbjct: 143 ENHRLLMENARLRGDYMRATELLNQIVLQHSAAPGPAVQRPP------------------ 184

Query: 295 LSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM 354
               V    P            VV+P +         D  + R      A AAMD+ V +
Sbjct: 185 ---AVVFRRPG----------AVVLPVDEGASKQADRDTRLRRH-----AEAAMDQFVML 226

Query: 355 AQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVE 414
           A + EPLW+ + +G     L +++        + +   G + EA+RETG+V      L+ 
Sbjct: 227 ATSGEPLWLPTPDGEALSYLGYQK-----KATLPMHHGGLIMEATRETGIVRAFVADLIV 281

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
            L D  RW EMFP ++A   T   I++G  G+    +QLM+AEL V SP +  R +NFLR
Sbjct: 282 KLTDAKRWCEMFPDVVASVTTNGAITAGDFGS---CIQLMNAELWVQSPRLHNRRINFLR 338

Query: 475 FCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN----CRRLPSGCVVQDMPNG--Y 522
           + K+ AEG WAV+DVS+D I      R T+ A A  N    CR LPSGC+++DM  G  Y
Sbjct: 339 YNKRVAEGQWAVMDVSVDGILGPSAGRRTTDATAVANNTTGCRLLPSGCLIEDMGKGNDY 398

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
            K+TWV HAEYDE+ V  L++PL+ SG  FGA RW+A+LQ Q E L IL S+ V
Sbjct: 399 CKITWVVHAEYDETMVPTLFRPLLRSGKAFGAHRWLASLQSQYEYLTILHSSQV 452


>gi|30678803|ref|NP_186976.2| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
 gi|187471152|sp|Q9M9P4.2|HDG8_ARATH RecName: Full=Homeobox-leucine zipper protein HDG8; AltName:
           Full=HD-ZIP protein HDG8; AltName: Full=Homeodomain
           GLABRA 2-like protein 8; AltName: Full=Homeodomain
           transcription factor HDG8; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 8
 gi|332640397|gb|AEE73918.1| homeobox-leucine zipper protein HDG8 [Arabidopsis thaliana]
          Length = 699

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/467 (35%), Positives = 254/467 (54%), Gaps = 43/467 (9%)

Query: 116 DNMDGASGDDL----DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           +N  G+SG++     DA  N   K+  HRHTPQQIQ LE+ FKECPHPDE+QR +L + L
Sbjct: 3   NNGGGSSGNEQYTSGDAKQNG--KRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL 60

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
            LE  Q+KFWFQN+RTQ KTQ +R  N LLR EN+ L+++N ++ DA+++ +C  CGGP 
Sbjct: 61  KLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNEAMLDALKSVLCPACGGPP 120

Query: 232 IIGDISLEE-----QHLRIENARLKDELDRVCALAGKFL-GRPVSSMGPPPMPNSSLELG 285
                  EE     Q LR ENARLKD  DR+     +     P        +P  SL+  
Sbjct: 121 F----GREERGHNLQKLRFENARLKDHRDRISNFVDQHKPNEPTVEDSLAYVP--SLDRI 174

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELAL 345
              ING G +    ++  P +F   I    P+                  + S+  E+A 
Sbjct: 175 SYGING-GNMYEPSSSYGPPNFQ--IIQPRPLA---------------ETDMSLLSEIAA 216

Query: 346 AAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMV 405
           +A++EL ++   +E  W++S       V++ E Y R               E+S+   +V
Sbjct: 217 SAVEELKRLFLAEEQFWVKSCIDET-YVIDTESYERFSHAVKHFSSTTAHVESSKAVTVV 275

Query: 406 IINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN-GALQLMHAELQVLSPL 464
            + ++ L++  +DP +W E+FP ++ +  T  V+ SG+    N   LQ+M  +L +LSPL
Sbjct: 276 HVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQVMWEQLHILSPL 335

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           VP RE   +R C++  +G+W + DVS     +   A     C + PSGC++Q +P+ +SK
Sbjct: 336 VPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAA----CYKRPSGCLIQALPDAHSK 391

Query: 525 VTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           V W+EH E D     H++Y+ L+  G G+GA+RW+ TL+R CE +A+
Sbjct: 392 VMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMAL 438


>gi|357448571|ref|XP_003594561.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483609|gb|AES64812.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 694

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/455 (34%), Positives = 241/455 (52%), Gaps = 28/455 (6%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GS++ +  +G+  D    P  K    R T  Q   L++  KEC HPDE QR +L+ ++ L
Sbjct: 8   GSESGEEVNGNFRDDGKKPSHK----RLTSAQTSILKNFMKECHHPDEAQRCQLAVKIGL 63

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG-PAI 232
           E +Q+K WFQN+R  +K Q ER  N  LR+ENDK+R EN+ I++ ++  IC +CGG P  
Sbjct: 64  EPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEELKAKICLDCGGSPFP 123

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
           + D     Q ++ ENA+LK E ++V +L   ++ + +S            E  + +I  F
Sbjct: 124 MKDHQNFVQEMKQENAQLKQECEKVSSLLASYMEKKIS--------RPEFEQALKSIKSF 175

Query: 293 GGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELV 352
                      P D+         +VM     G   T  +   ++    ++  AAMDELV
Sbjct: 176 -----------PRDYECSSHMQGNLVMWGGVLGQTSTQ-NYDAQKITMSQVVDAAMDELV 223

Query: 353 KMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLAL 412
           ++ + DEP W++         L+ E Y + F      K      E+S+ +G+V I+ + L
Sbjct: 224 RLVRVDEPFWVKPSNTQDGYTLHRENYEQVFPKNNHFKGAYVCEESSKYSGLVKISGIEL 283

Query: 413 VETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNF 472
           V   +D  +W  +FP ++ +  T  V   G  G+R+GAL LM+ E+ +LSPLV  RE N 
Sbjct: 284 VGMFLDLVKWTNLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNI 343

Query: 473 LRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAE 532
           +R+CK+   GVW + DVS D+ R  + AP     +  PSGC++++MP+G   VTWVEH E
Sbjct: 344 IRYCKKVDPGVWVITDVSFDSSRPNT-APLSRGWKH-PSGCIIREMPHGGCLVTWVEHVE 401

Query: 533 Y-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
             D+   H +Y+ L+     +GA+ W+  LQR CE
Sbjct: 402 VEDKIHTHYVYRDLVGEYNLYGAESWIKELQRMCE 436


>gi|357448567|ref|XP_003594559.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483607|gb|AES64810.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 699

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 157/458 (34%), Positives = 244/458 (53%), Gaps = 34/458 (7%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GS++ +  +G+  D  +    K  + R T  Q   L++  KEC HPDE +R +L+  + L
Sbjct: 8   GSESGEEVNGNFRDDGE----KSSHKRLTSAQTSILKNFMKECHHPDEAERHQLAVEVGL 63

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI- 232
           E +Q+KFWFQN+RT +K Q ER  N  LR+ENDK+R EN+ I++ ++  IC +CGGP   
Sbjct: 64  EPKQIKFWFQNKRTLLKHQHERETNGTLRRENDKIRNENLKIKEVLKAKICLDCGGPPFP 123

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
           + D     Q L+ ENA+LK E +++ +L   ++ + +S            E  + +I  F
Sbjct: 124 MKDHQNFVQDLKQENAQLKQECEKMSSLLASYMEKKIS--------RPEFEQALKSIKSF 175

Query: 293 G---GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMD 349
                 SS V   L A +G      L      N     +T            ++  AAMD
Sbjct: 176 SRDYECSSHVHGNL-ATWG----GVLGQTSTQNYDAQKIT----------MSQVVDAAMD 220

Query: 350 ELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINS 409
           ELV++ + +EP W++S         + E Y + F      K      E+S+ +G+V I+ 
Sbjct: 221 ELVRLVRVNEPFWVKSPNTQDGYTFHRESYEQVFPKNNHFKGANVCEESSKYSGLVKISG 280

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
           + LV   +D  +W  +FP ++ +  T  V   G  G+R+GAL LM+ E+ +LSPLV  RE
Sbjct: 281 IDLVGMFLDSVKWTNLFPTIVTKAETIKVFEIGSPGSRDGALLLMNEEMHILSPLVRPRE 340

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVE 529
            N +R+CK+   GVW + DVS D+ R  + AP     +  PSGC++++MP+G   VTWVE
Sbjct: 341 FNIIRYCKKFDAGVWVIADVSFDSSRPNT-APLSRGWKH-PSGCIIREMPHGGCLVTWVE 398

Query: 530 HAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           H E  D+   H +Y+ L+ +   +GA+ W+  LQR CE
Sbjct: 399 HVEVEDKIHTHYVYRDLVGNYNLYGAESWIKELQRMCE 436


>gi|2245130|emb|CAB10551.1| GLABRA2 like protein [Arabidopsis thaliana]
 gi|7268524|emb|CAB78774.1| GLABRA2 like protein [Arabidopsis thaliana]
          Length = 661

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 166/457 (36%), Positives = 237/457 (51%), Gaps = 88/457 (19%)

Query: 132 PP--RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP  +KKRYHRHT  QIQ++E+LFKE  HPD K RL LSK+L L   QVKFWFQN+RTQ+
Sbjct: 84  PPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQI 143

Query: 190 KTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENAR 249
           K Q  R +N+ L+ EN+ L+ E+ +I+   +   C+ CG             +LR+ENAR
Sbjct: 144 KAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCG------------HNLRLENAR 191

Query: 250 LKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGT 309
           L+ ELDR+ ++        VS   P P                   S  +T         
Sbjct: 192 LRQELDRLRSI--------VSMRNPSP-------------------SQEIT--------- 215

Query: 310 GISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS 369
                     P          L    E+++ +ELA++   EL KM   +EPLW +    +
Sbjct: 216 ----------PETNKNNNDNMLIAEEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDN 265

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
               LN EEY + F   +    + F  EASR   ++++N + LV+  +D ++W+EMF  +
Sbjct: 266 ESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPI 325

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           ++   T  +ISSG  G  +G L L +AE                       EG W VVD 
Sbjct: 326 VSSAKTAQIISSGASGP-SGTLLLQNAE-----------------------EGKWMVVDF 361

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH-QLYKPLIIS 548
            ID I+  S A      RR PSGC++Q M NGYS+VTWVEH E +E  V  ++ +  + S
Sbjct: 362 PIDRIKPAS-ATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVES 420

Query: 549 GMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIY 585
           G+ FGA+RW++ L+RQCE +A LM+T+++  D  GIY
Sbjct: 421 GVAFGAERWLSVLKRQCERMASLMATNIT--DLGGIY 455


>gi|15237948|ref|NP_197234.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
 gi|75309030|sp|Q9FFI0.1|HDG9_ARATH RecName: Full=Homeobox-leucine zipper protein HDG9; AltName:
           Full=HD-ZIP protein HDG9; AltName: Full=Homeodomain
           GLABRA 2-like protein 9; AltName: Full=Homeodomain
           transcription factor HDG9; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 9
 gi|10177077|dbj|BAB10519.1| homeobox protein [Arabidopsis thaliana]
 gi|332005030|gb|AED92413.1| homeobox-leucine zipper protein HDG9 [Arabidopsis thaliana]
          Length = 718

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 262/487 (53%), Gaps = 47/487 (9%)

Query: 116 DNMDGASGDDLDA-ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           DN      +D+DA  +N   KK YHRHT +QI  LE+ FKECPHPDE QR  L + L L+
Sbjct: 7   DNSSDERENDVDANTNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLK 66

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            +Q+KFWFQN+RTQ K+  E+ +N+ LR EN K+R EN S+ DA+ N +C  CGG     
Sbjct: 67  PKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENESMEDALNNVVCPPCGGRGPGR 126

Query: 235 DISLEE-QHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFG 293
           +  L   Q LR +NA LKDE +RV     ++ G  + ++   P            ++G  
Sbjct: 127 EDQLRHLQKLRAQNAYLKDEYERVSNYLKQYGGHSMHNVEATPY-----------LHGPS 175

Query: 294 GLSSTVTTTLPADFGTGISNALP----------------VVMPPNRSGP----GVTGLDR 333
             +ST +   PA +GT  SN LP                   PP    P        L +
Sbjct: 176 NHAST-SKNRPALYGTS-SNRLPEPSSIFRGPYTRGNMNTTAPPQPRKPLEMQNFQPLSQ 233

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
            +E+   LE A  A+ E++ + Q D+ +W +S     R V++   Y + FT       NG
Sbjct: 234 -LEKIAMLEAAEKAVSEVLSLIQMDDTMWKKS-SIDDRLVIDPGLYEKYFTKT---NTNG 288

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
              E+S++  +V +++  L++  +   +WA +FP ++    T  V+ S     +  + ++
Sbjct: 289 -RPESSKDVVVVQMDAGNLIDIFLTAEKWARLFPTIVNEAKTIHVLDSVDHRGKTFS-RV 346

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           ++ +L +LSPLVP RE   LR C+Q  + VW + DVS   +       +F  C + PSG 
Sbjct: 347 IYEQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCH-LPNIEFDLSFPICTKRPSGV 405

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQV--HQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           ++Q +P+G+SKVTW+EH   ++++V  H+LY+ L+  G G+GA+RW  TL+R CE L  +
Sbjct: 406 LIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCERL--I 463

Query: 572 MSTSVSA 578
            STSV A
Sbjct: 464 FSTSVPA 470


>gi|115475738|ref|NP_001061465.1| Os08g0292000 [Oryza sativa Japonica Group]
 gi|38175461|dbj|BAD01388.1| putative OCL3 protein [Oryza sativa Japonica Group]
 gi|113623434|dbj|BAF23379.1| Os08g0292000 [Oryza sativa Japonica Group]
          Length = 786

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/489 (36%), Positives = 251/489 (51%), Gaps = 52/489 (10%)

Query: 114 GSDNMDGASG--DDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D  +G     +  D   RKK  RY   T QQ + L   F+ CP+PD     +L+K
Sbjct: 37  GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L +   Q+K+WFQN RT+MK      E  LL++EN++L+ EN  +R+ M+N  C  C  
Sbjct: 97  ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 156

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
           P    D          EN  L      V +     + + VSS+    +P+SS     G +
Sbjct: 157 PLFHIDCR------HWENPMLNKGNHGVTS---NLIPQAVSSL----LPSSS-----GFV 198

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL-----DRSIERSMFLELA 344
                LSS       +   + +    P V   N   P +  L     D   E+++ L+LA
Sbjct: 199 ASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANF--PILHNLSANANDGYTEKNVLLDLA 256

Query: 345 LAAMDELVKMAQTDE----------PLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
             AM+E   + + +E          PLW+   +  G + LN++EYL   +  IG KP  F
Sbjct: 257 NRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDF 315

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
               +R+T +V  + + LV++L+D NRW E+FP ++A   TT +IS+G     +G LQLM
Sbjct: 316 KVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLM 375

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------------RETSGAPA 502
            AELQV+SP VPV +V FLR   Q   G+W VVDVSIDTI            + +S A  
Sbjct: 376 RAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSSTAAR 435

Query: 503 FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            +  R LPSGCV+++M NGYSKVTW+ HA YDE  V  LY  L+ S    GA RWVA+LQ
Sbjct: 436 RMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQ 495

Query: 563 RQCECLAIL 571
           R  + L+ L
Sbjct: 496 RHSQFLSGL 504


>gi|218200868|gb|EEC83295.1| hypothetical protein OsI_28655 [Oryza sativa Indica Group]
          Length = 790

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 179/493 (36%), Positives = 251/493 (50%), Gaps = 56/493 (11%)

Query: 114 GSDNMDGASG--DDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D  +G     +  D   RKK  RY   T QQ + L   F+ CP+PD     +L+K
Sbjct: 37  GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L +   Q+K+WFQN RT+MK      E  LL++EN++L+ EN  +R+ M+N  C  C  
Sbjct: 97  ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 156

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
           P    D          EN  L      V +     + + VSS+    +P+SS     G +
Sbjct: 157 PLFHIDCR------HWENPMLNKGNHGVTS---NLIPQAVSSL----LPSSS-----GFV 198

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL-----DRSIERSMFLELA 344
                LSS       +   + +    P V   N   P +  L     D   E+++ L+LA
Sbjct: 199 ASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANF--PILHNLSANANDGYTEKNVLLDLA 256

Query: 345 LAAMDELVKMAQTDE----------PLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
             AM+E   + + +E          PLW+   +  G + LN++EYL   +  IG KP  F
Sbjct: 257 NRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDF 315

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL- 453
               +R+T +V  + + LV++L+D NRW E+FP ++A   TT +IS+G     +G LQL 
Sbjct: 316 KVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLK 375

Query: 454 ---MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------------RETS 498
              M AELQV+SP VPV +V FLR   Q   G+W VVDVSIDTI            + +S
Sbjct: 376 NLQMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSS 435

Query: 499 GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWV 558
            A   +  R LPSGCV+++M NGYSKVTW+ HA YDE  V  LY  L+ S    GA RWV
Sbjct: 436 TAARRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWV 495

Query: 559 ATLQRQCECLAIL 571
           A+LQR  + L+ L
Sbjct: 496 ASLQRHSQFLSGL 508


>gi|222640282|gb|EEE68414.1| hypothetical protein OsJ_26774 [Oryza sativa Japonica Group]
          Length = 922

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 179/493 (36%), Positives = 251/493 (50%), Gaps = 56/493 (11%)

Query: 114 GSDNMDGASG--DDLDAADNPPRKK--RYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D  +G     +  D   RKK  RY   T QQ + L   F+ CP+PD     +L+K
Sbjct: 169 GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 228

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG 229
            L +   Q+K+WFQN RT+MK      E  LL++EN++L+ EN  +R+ M+N  C  C  
Sbjct: 229 ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 288

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
           P    D          EN  L      V +     + + VSS+    +P+SS     G +
Sbjct: 289 PLFHIDCR------HWENPMLNKGNHGVTS---NLIPQAVSSL----LPSSS-----GFV 330

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL-----DRSIERSMFLELA 344
                LSS       +   + +    P V   N   P +  L     D   E+++ L+LA
Sbjct: 331 ASGSNLSSNAVLMPVSAMPSSVLQPAPAVSGANF--PILHNLSANANDGYTEKNVLLDLA 388

Query: 345 LAAMDELVKMAQTDE----------PLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
             AM+E   + + +E          PLW+   +  G + LN++EYL   +  IG KP  F
Sbjct: 389 NRAMEEFFSLMKENESLLVKKKENGPLWLPHMDILGVESLNYQEYLAK-SRTIGQKPVDF 447

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL- 453
               +R+T +V  + + LV++L+D NRW E+FP ++A   TT +IS+G     +G LQL 
Sbjct: 448 KVVVTRDTAIVNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLK 507

Query: 454 ---MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------------RETS 498
              M AELQV+SP VPV +V FLR   Q   G+W VVDVSIDTI            + +S
Sbjct: 508 NLQMRAELQVMSPEVPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSS 567

Query: 499 GAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWV 558
            A   +  R LPSGCV+++M NGYSKVTW+ HA YDE  V  LY  L+ S    GA RWV
Sbjct: 568 TAARRMEVRLLPSGCVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWV 627

Query: 559 ATLQRQCECLAIL 571
           A+LQR  + L+ L
Sbjct: 628 ASLQRHSQFLSGL 640


>gi|15218724|ref|NP_174724.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
 gi|75199883|sp|Q9S9Z0.1|HDG10_ARATH RecName: Full=Homeobox-leucine zipper protein HDG10; AltName:
           Full=HD-ZIP protein HDG10; AltName: Full=Homeodomain
           GLABRA 2-like protein 10; AltName: Full=Homeodomain
           transcription factor HDG10; AltName: Full=Protein
           HOMEODOMAIN GLABROUS 10
 gi|5668786|gb|AAD46012.1|AC007894_10 Similar to gb|Z54356 HD-ZIP protein (Athb-10) from Arabidopsis
           thaliana and contains a PF|00046 homeobox domain
           [Arabidopsis thaliana]
 gi|332193611|gb|AEE31732.1| homeobox-leucine zipper protein HDG10 [Arabidopsis thaliana]
          Length = 708

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/466 (34%), Positives = 243/466 (52%), Gaps = 40/466 (8%)

Query: 141 HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           H+  Q+Q LE+ F ECPHPD+ QR +L   L L+ +Q+KFWFQNRRTQ +   E+ +N  
Sbjct: 23  HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIA 82

Query: 201 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCAL 260
           LR EN K+R  N ++  A+   +C  CGGP    +     Q LR +N  LK E +R+ + 
Sbjct: 83  LRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTEYERLSSY 142

Query: 261 AGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALP---- 316
             K  G  + S+   P            ++G     ST +   PA +G+  SN LP    
Sbjct: 143 LTKHGGYSIPSVDALP-----------DLHGPSTYGST-SNNRPASYGSS-SNHLPQQSS 189

Query: 317 -VVMPPNRSGPGVTGLDRSI-----------ERSMFLELALAAMDELVKMAQTDEPLWIR 364
            +  P  R     T L + +           E++   E+A  A+ E++ + Q +  +WI+
Sbjct: 190 LLRRPFTRELINTTPLPKPVLLQHFQQLSQLEKNRMFEIAKNAVAEVMSLIQMEHSMWIK 249

Query: 365 SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVT---EASRETGMVIINSLALVETLMDPNR 421
           S    GR +++   Y R FT    LK    +    E+S E  +V +++  LV+  ++  +
Sbjct: 250 S-TIDGRAIIDPGNYKRYFTKNSHLKSRSALQSHHESSMEVVVVQMDARNLVDMFLNTEK 308

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           WA +FP ++    T  V+ S M   R    ++++ +L +LSPLV  RE   LR C+Q  E
Sbjct: 309 WARLFPTIVTEAKTIHVLDS-MDHPRQTFSRVVYEQLHILSPLVLPREFIILRTCQQMKE 367

Query: 482 GVWAVVDVS--IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY-DESQV 538
            +W + DVS  +  +   S AP    C + PSG ++Q +P+G SKVTW+EH E  D+   
Sbjct: 368 DLWLIADVSCYLQNVEFESTAPI---CTKRPSGVLIQALPHGRSKVTWIEHVEVTDKVWP 424

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           HQLY+ L+  G G+GA+RW ATLQR CE L++   T     D+ G+
Sbjct: 425 HQLYRDLLYGGFGYGARRWTATLQRMCERLSLYSMTDFPPTDYPGV 470


>gi|357503647|ref|XP_003622112.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355497127|gb|AES78330.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 396

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 152/374 (40%), Positives = 208/374 (55%), Gaps = 72/374 (19%)

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +  +FK C +PDEKQRL+L + L ++  ++KFWFQNRRTQ+KTQ ER +N  L QENDK+
Sbjct: 87  IHMVFKTCSYPDEKQRLQLGRELAMDPTKIKFWFQNRRTQLKTQNERDDNCTLIQENDKI 146

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           R++N ++R+A++N IC+ C G           Q LRIENARLK+EL RV ++A  + G  
Sbjct: 147 RSQNKAMREALQNVICSTCDG-----------QKLRIENARLKEELVRVSSIAAGYTG-- 193

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGV 328
            SS   P +P                         PA    G+S+               
Sbjct: 194 -SSSTLPNVPYQ-----------------------PA----GLSHK-------------- 211

Query: 329 TGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIG 388
                  E+S+  ++A  AM EL+ + +T+EPLW++S   +GR  LN E Y   F     
Sbjct: 212 -------EKSLMFDIATNAMQELIFLMETNEPLWMKS-NNNGRDTLNLETYETMFPRTNN 263

Query: 389 -LKPNGFVTEASRETGMVIINSLALVETLMDP------NRWAEMFPCMIARTATTDVISS 441
            LK      EASR++G VI+N+L LVE  MDP      ++W E+FP ++    T +VISS
Sbjct: 264 QLKNPNIRIEASRKSGDVIMNALTLVEMFMDPIDFVEQHKWMELFPTIVTIAKTIEVISS 323

Query: 442 GMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP 501
                 +G+LQLM+ ELQVLSPLVP+RE  FLR+CKQ  EG WA+VDVS +       A 
Sbjct: 324 RTKDGLDGSLQLMYEELQVLSPLVPIREFYFLRYCKQFEEG-WAIVDVSYEFPHNKHFAS 382

Query: 502 AFVNCRRLPSGCVV 515
            F    RLPSGC +
Sbjct: 383 KF-RGHRLPSGCFI 395


>gi|6714433|gb|AAF26121.1|AC012328_24 hypothetical protein [Arabidopsis thaliana]
          Length = 695

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/426 (34%), Positives = 228/426 (53%), Gaps = 37/426 (8%)

Query: 153 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           F ECPHPDE+QR +L + L LE  Q+KFWFQN+RTQ KTQ +R  N LLR EN+ L+++N
Sbjct: 40  FIECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDN 99

Query: 213 MSIRDAMRNPICTNCGGPAIIGDISLEE-----QHLRIENARLKDELDRVCALAGKFL-G 266
            ++ DA+++ +C  CGGP        EE     Q LR ENARLKD  DR+     +    
Sbjct: 100 EAMLDALKSVLCPACGGPPF----GREERGHNLQKLRFENARLKDHRDRISNFVDQHKPN 155

Query: 267 RPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGP 326
            P        +P  SL+     ING G +    ++  P +F   I    P+         
Sbjct: 156 EPTVEDSLAYVP--SLDRISYGING-GNMYEPSSSYGPPNFQ--IIQPRPLA-------- 202

Query: 327 GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPC 386
                    + S+  E+A +A++EL ++   +E  W++S       V++ E Y R     
Sbjct: 203 -------ETDMSLLSEIAASAVEELKRLFLAEEQFWVKSCIDET-YVIDTESYERFSHAV 254

Query: 387 IGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGT 446
                     E+S+   +V + ++ L++  +DP +W E+FP ++ +  T  V+ SG+   
Sbjct: 255 KHFSSTTAHVESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIR 314

Query: 447 RN-GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVN 505
            N   LQ+M  +L +LSPLVP RE   +R C++  +G+W + DVS     +   A     
Sbjct: 315 GNCNVLQVMWEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAA---- 370

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQ 564
           C + PSGC++Q +P+ +SKV W+EH E D     H++Y+ L+  G G+GA+RW+ TL+R 
Sbjct: 371 CYKRPSGCLIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERM 430

Query: 565 CECLAI 570
           CE +A+
Sbjct: 431 CERMAL 436


>gi|449479674|ref|XP_004155671.1| PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR
           2-like [Cucumis sativus]
          Length = 549

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 190/317 (59%), Gaps = 28/317 (8%)

Query: 274 PPPMPNSSLELGVGTINGFGGLSSTVTTTL--PADFGTGISNALPVVMPPNRSGPGVTGL 331
           P   P  SL+LG   I  FG  SS     +   ADF   IS          R   G    
Sbjct: 16  PTNAPTRSLDLG---ITNFGPQSSGFVGEMYGAADFFRSIS----------RPSEG---- 58

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRS-FEGSGRQVLNHEEYLRTFTPCIGLK 390
               E+ + +ELA++ M+EL +MAQ  EPLW+    + SG  VLN  EYLR+F   I  K
Sbjct: 59  ----EKPVIVELAVSGMEELRRMAQGGEPLWVAGDGKSSGEVVLNEAEYLRSFGGGIVGK 114

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
           P GF TEASR + +V +N + LV+  MD  +W+ +F  +++R +T +++S G+ G  NGA
Sbjct: 115 PMGFRTEASRVSAVVFMNHMKLVDIFMDATQWSTVFCGIVSRASTVEILSPGLPGNFNGA 174

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLP 510
           L +M AE QV SPLVP RE  F+R+CKQ  +G WAV DVS+DT+R +       N RR P
Sbjct: 175 LHVMSAEFQVPSPLVPTRENYFVRYCKQQTDGSWAVADVSLDTLRPS----PIPNTRRKP 230

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC++Q++PNGYSK+TWVEH E DE+ V  +Y+ L+ SG+ FGA+RWVATL RQ E  A 
Sbjct: 231 SGCLIQELPNGYSKITWVEHVEVDETGVPTMYRTLVNSGLAFGAKRWVATLDRQSERFAT 290

Query: 571 LMSTSVSARDHTGIYDI 587
            ++T++   D   I  I
Sbjct: 291 SIATTIPTGDLRVISSI 307


>gi|293331325|ref|NP_001169573.1| uncharacterized protein LOC100383453 [Zea mays]
 gi|224030161|gb|ACN34156.1| unknown [Zea mays]
          Length = 487

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 124/236 (52%), Positives = 166/236 (70%), Gaps = 7/236 (2%)

Query: 348 MDELVKMAQTDEPLW--IRSFEGSGRQVLNHEE-YLRTFTPCIGLKPNGFVTEASRETGM 404
           M+ELV+MAQ DEPLW      +GS  +   +EE Y R F   +G KP G  +EASR++ +
Sbjct: 1   MEELVRMAQLDEPLWNAPAGLDGSAEEETLNEEEYARLFPGGLGPKPYGLNSEASRDSAV 60

Query: 405 VIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPL 464
           VI+    LVE LMD N++A +F  +++R AT +V+S+G+ G  NGALQ+M  E QV SPL
Sbjct: 61  VIMTHANLVEILMDVNQYAAVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQVPSPL 120

Query: 465 VPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSK 524
           VP RE  F+R+CKQ+A+G WAVVDVS+D +R      A + CRR PSGC++Q+MPNGYSK
Sbjct: 121 VPTRESYFVRYCKQNADGTWAVVDVSLDGLRPG----AVLKCRRRPSGCLIQEMPNGYSK 176

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL RQCE LA +M++++   D
Sbjct: 177 VTWVEHVEVDDRSVHSIYKLLVSSGLAFGARRWVGTLDRQCERLASVMASNIPTSD 232


>gi|242072556|ref|XP_002446214.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
 gi|241937397|gb|EES10542.1| hypothetical protein SORBIDRAFT_06g004510 [Sorghum bicolor]
          Length = 735

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 230/481 (47%), Gaps = 105/481 (21%)

Query: 124 DDLD----AADNPPRK-KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           DD+D      + P +  KR+  H   QIQELE+ F+ C HP+   R EL+ ++ LE RQV
Sbjct: 34  DDVDHRSPVGETPSKGVKRFAMH---QIQELEAQFRVCSHPNPDVRQELATKIGLEERQV 90

Query: 179 KFWFQNRRTQMKTQLER-----------------------HENSLLRQENDKLRAENMSI 215
           KFWFQNRR+QMK  L+                         +N  +RQE  KL+AEN  +
Sbjct: 91  KFWFQNRRSQMKASLDLTTILILLCRLFWLLCLSLVKAYGDDNKGIRQELAKLKAENEEL 150

Query: 216 RDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPP 275
           +   +NPIC  C  P  I  I  E   L  +N RLKDE  R  A   + +    +   P 
Sbjct: 151 KQRRQNPICFMCTNP--IAAIQSENWRLLNDNTRLKDEYVRSKAHMDRLIREAAAEHPPS 208

Query: 276 PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI 335
            M +S   L    +N                         PV +  N      T L+ ++
Sbjct: 209 AMRSSDHHLASAHMN-----------------------MDPVALTGN--CRTTTNLEATL 243

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY-LRTFTPCIGLKPNGF 394
                   A  AM E V +A   EP+W+ + +G   + LNH+EY L+TF   +GL P GF
Sbjct: 244 TSH-----AARAMKEFVMLATKGEPMWVLAKDG---EKLNHQEYILQTFPGLLGLCPQGF 295

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
           V EA+RET M+   ++ LV  L D                                  +M
Sbjct: 296 VEEATRETDMIKGTAMDLVSILTD----------------------------------VM 321

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI----RETSGAPAFVNCRRLP 510
           + EL V SP +  R V FLRF K  A G WAVVDVS+D I    +E S       CR LP
Sbjct: 322 NVELWVQSPRLLNRSVKFLRFSKMMANGRWAVVDVSVDGIYGVEQEGSSTSYTTGCRLLP 381

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           SGC+++DM  GY KVTWV HAEYDE+ V  L++PL+ SG   GA RW+ +LQ+QCE + +
Sbjct: 382 SGCLLEDMSGGYCKVTWVVHAEYDETTVPFLFRPLLQSGQALGACRWLRSLQKQCEYITV 441

Query: 571 L 571
           L
Sbjct: 442 L 442


>gi|242072358|ref|XP_002446115.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
 gi|241937298|gb|EES10443.1| hypothetical protein SORBIDRAFT_06g001940 [Sorghum bicolor]
          Length = 775

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 170/514 (33%), Positives = 248/514 (48%), Gaps = 86/514 (16%)

Query: 117 NMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           N D A+G +    +N    KR  R   +Q+Q+LES F+EC HPD+  R EL+ R+ +ETR
Sbjct: 38  NNDKATGGEEHNINNGSSSKRSKRFNVEQLQQLESSFQECTHPDDAMRRELAARVGIETR 97

Query: 177 QVKFWFQNRRTQMK----------------------------------TQLERHENSLLR 202
           QVKFWFQNRRTQ K                                   +    EN+  R
Sbjct: 98  QVKFWFQNRRTQTKHSSAAGTAEDGSRALDAAAPALALTLALAAGAAAVKSYATENNKFR 157

Query: 203 QENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAG 262
           Q+N  L AENM +   +    C+ C  P      + E+  L  ENA+LK+    +C  A 
Sbjct: 158 QQNADLLAENMELHKEL---TCSRCRDP------TAEKWQLLDENAKLKE----MCQRAN 204

Query: 263 KFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPN 322
             L + + +   PP                        +  P D       AL   M P 
Sbjct: 205 ADLTKLIQAADRPP------------------------SVTPEDL------ALVTSMNPL 234

Query: 323 RSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRT 382
            S  G +    +  +   L  A  A+ E   +A+   PLW+    G+   +LN +EY R 
Sbjct: 235 SSNVGNSSSSTNNLQVTLLSYAECAIKEFDILARNGPPLWLPIIGGN---MLNIQEYTRL 291

Query: 383 FTPCI-GLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISS 441
             P + G+ P GFV EA+R+T +V   +  L+  L +  RW E FP ++A       +SS
Sbjct: 292 RFPRLHGICPQGFVVEATRDTALVRGTASDLLGILTNVPRWFETFPGIVAAVRDYHNVSS 351

Query: 442 GMGGTRNGALQ---LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS 498
           G+ G+ NG +Q    ++ +L V SP  P+R + FLR   Q A G +AVVDVSI+ + E  
Sbjct: 352 GIFGSGNGLIQELLQINVDLSVESPCPPLRSMKFLRISMQTANGDFAVVDVSINGVHEQE 411

Query: 499 GAPA--FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQR 556
                   +CR LPSGC++QDM +G+ +VTW+ HAEY+E+ V  +++    SG  FGA R
Sbjct: 412 AGSKNKHTSCRLLPSGCLIQDMGDGHCQVTWIVHAEYNETIVPPIFRQFFGSGQAFGASR 471

Query: 557 WVATLQRQCECLAILMSTSVSARDHTGIYDINTL 590
           W+A+L+R CE  A++ S+ V      G+  I+ L
Sbjct: 472 WLASLKRHCEYKAVMHSSQVPTGGGLGVVTISAL 505


>gi|115480263|ref|NP_001063725.1| Os09g0526300 [Oryza sativa Japonica Group]
 gi|113631958|dbj|BAF25639.1| Os09g0526300, partial [Oryza sativa Japonica Group]
          Length = 131

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 111/131 (84%), Positives = 127/131 (96%), Gaps = 1/131 (0%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK-TQ 192
           +KKRYHRHTPQQIQELE++FKECPHPDEKQR+ELS+RL LE+RQVKFWFQNRRTQMK TQ
Sbjct: 1   KKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
           +ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A++G++SLEEQHLRIENARLKD
Sbjct: 61  IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120

Query: 253 ELDRVCALAGK 263
           ELDRVCALAGK
Sbjct: 121 ELDRVCALAGK 131


>gi|449523245|ref|XP_004168634.1| PREDICTED: homeobox-leucine zipper protein HDG11-like, partial
           [Cucumis sativus]
          Length = 324

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 209/335 (62%), Gaps = 24/335 (7%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           S D+ +A+++   KK YHRH P QIQ+LES F++CPHPDE QR +LS+ L LET+Q+KFW
Sbjct: 11  SPDEQEASNDRKGKKTYHRHNPYQIQQLESFFRQCPHPDENQRRQLSRELGLETKQIKFW 70

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE- 240
           FQN+RTQ K Q ER +NS LR EN+K++ EN++IR+A+RN IC +CGGP   G+   +  
Sbjct: 71  FQNKRTQTKAQNERADNSSLRTENEKIQCENLAIREALRNVICPSCGGPP-FGEEERQRN 129

Query: 241 -QHLRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPNSSLELGVGTINGFGGLSST 298
            Q LR+EN+ LK+E ++V  L  K++G+P+S +    P+  SSL+L            S+
Sbjct: 130 LQKLRLENSHLKEEHEKVSNLLAKYIGKPISQLESLLPVLGSSLDLSP---------RSS 180

Query: 299 VTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTD 358
           +T  +P+     IS+  PV++    +     G++  +E ++ LE A   ++EL+++ + D
Sbjct: 181 LTQIVPSPAVDLISD--PVILDGAATPYQSRGIN-DLENALMLETAATGLEELIRLLRID 237

Query: 359 EPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           EPLW++S    GR VL+ + Y + F      K +   TE+S+  G+V ++++ L      
Sbjct: 238 EPLWMKSL-NDGRYVLHRDSYEKIFPRPNHFKTSSARTESSKALGVVTMSAIQL------ 290

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
            ++WA++FP +I    T  +I  GM G R+GALQL
Sbjct: 291 -DKWADLFPTIITNAETFHIIDPGMPGNRSGALQL 324


>gi|357448581|ref|XP_003594566.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
 gi|355483614|gb|AES64817.1| Homeobox-leucine zipper protein ROC7 [Medicago truncatula]
          Length = 660

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 150/452 (33%), Positives = 242/452 (53%), Gaps = 66/452 (14%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           SGD+ D+ DN    KR  RH+  QI +LE +FK   HPD+ Q+ E++++L LE +QVK+W
Sbjct: 4   SGDEEDS-DNSNESKRVCRHSADQILKLEEIFKTLTHPDDNQKYEIAQQLELEPQQVKWW 62

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCGGPAIIGDISLEE 240
           FQN+R  +K +  +  N  LR EN+++  ENM +++ ++N +C ++C G   +       
Sbjct: 63  FQNKRAHIKNKNLKPANDALRAENERILKENMEMKERLKNLLCQSSCNGSNSL------- 115

Query: 241 QHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVT 300
           + L++ENARLK+  + +                       SLEL +G        S+  +
Sbjct: 116 KQLQVENARLKERYEMM------------------QKKEVSLELKLGLPKS----STRGS 153

Query: 301 TTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
           T+L  D G+   ++L +  P                  M L   LAA +EL+K+ + DE 
Sbjct: 154 TSLNLDRGSSSKSSLEIQNP------------------MMLVAGLAATEELLKLFR-DES 194

Query: 361 LWIRSFEGSGRQVL--NHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           LW++S + + R VL  N+E+         G K +    E+S+++ M+ I +  LVE  +D
Sbjct: 195 LWVKS-QLNRRLVLEKNYEDVFPRVDHFNGAKTH---VESSKDSQMLKIGATHLVEMFLD 250

Query: 419 PNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL------MHAELQVLSPLVPVREVNF 472
             +WA +FP ++ +  T  V+       ++GAL L      MH E+ VLSPLV  R+  F
Sbjct: 251 SEKWANLFPTIVNKAETIKVLERDSSQNQSGALLLGLCYVQMHGEMHVLSPLVKPRQFYF 310

Query: 473 LRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAE 532
           LR+C Q   G+W + DVS D ++E     +F    R PSGC++Q + N  SKV+W+EH E
Sbjct: 311 LRYCVQVEAGIWVIADVSYDYLKEDGPHSSF---WRFPSGCMIQQISNETSKVSWIEHVE 367

Query: 533 YD-ESQVHQLYKPLIISGMGFGAQRWVATLQR 563
            D + Q H +Y+ ++ + + FGA+RW+  L+R
Sbjct: 368 VDLKIQTHSMYRDIVNNAIAFGAERWLMELRR 399


>gi|31339105|dbj|BAC77159.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
          Length = 131

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 110/131 (83%), Positives = 126/131 (96%), Gaps = 1/131 (0%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK-TQ 192
           +KKRYHR TPQQIQELE++FKECPHPDEKQR+ELS+RL LE+RQVKFWFQNRRTQMK TQ
Sbjct: 1   KKKRYHRXTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
           +ERHEN+LLRQENDKLRAENM+IR+AMRNP+C +CGG A++G++SLEEQHLRIENARLKD
Sbjct: 61  IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120

Query: 253 ELDRVCALAGK 263
           ELDRVCALAGK
Sbjct: 121 ELDRVCALAGK 131


>gi|345195190|tpg|DAA34960.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587876|tpg|DAA38447.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 750

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/479 (32%), Positives = 244/479 (50%), Gaps = 57/479 (11%)

Query: 106 LLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           L+  E +  +D        +LD   +  R KR+   T QQ+Q+LES F++C HPD++ R 
Sbjct: 37  LMGDEDQLNTDQAIFCEEHNLDKVSSSKRPKRF---TVQQLQQLESSFQKCSHPDDEMRQ 93

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           EL+ ++ +  RQVKFWFQNRR+Q+K +    EN+  R++N +L A NM +++ ++   C+
Sbjct: 94  ELAAKVGISARQVKFWFQNRRSQIKVRSCGTENNKYRRQNAELLATNMELKEQLKGMTCS 153

Query: 226 NCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELG 285
            C  P I     +++  L  ENA+L++    + +LA   L + +     PP         
Sbjct: 154 RCDAPTI-----MQKWQLMDENAKLRE----MYSLASAELTKLMQEANLPP--------- 195

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELAL 345
                                  + I   + +V   N      +    +I +   L    
Sbjct: 196 -----------------------SVILEDMALVTSMNPLSSNASSSRSTINQDELLSYVE 232

Query: 346 AAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCI--GLKPNGFVTEASRETG 403
            A+ E   + +   PLW+ +  G    VLN +EY     P +   ++P GFV EA+R+T 
Sbjct: 233 CAIKEFEMLVRDGTPLWLPTIGGD---VLNSKEYACQRFPRLHGTIRPEGFVVEATRDTA 289

Query: 404 MVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ---LMHAELQV 460
           +V  ++  +V+ L D  RW + FPC++A      VI SG   + N  +Q    ++ +L V
Sbjct: 290 IVKGSAPDIVDILTDVPRWYKAFPCIVAALRAYHVIFSGPFASGNVLIQELLQINVDLSV 349

Query: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDT---IRETSGAPAFVNCRRLPSGCVVQD 517
            SP  P+R + FLR  KQ+A G + VVDVSI+    I E  G+        LPSGC+++D
Sbjct: 350 ESPRPPLRNMKFLRITKQNANGDFVVVDVSINDVQGIHEQQGSQH--KHTMLPSGCLIKD 407

Query: 518 MPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
             +GY +VTW+ HAEY+E+ V  L++    SG+ FGA RW+A+LQR CE + +  S  V
Sbjct: 408 KGDGYCQVTWIVHAEYEEASVPPLFRQFYQSGLAFGASRWLASLQRHCEYMVVKHSIQV 466


>gi|345195192|tpg|DAA34961.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414587883|tpg|DAA38454.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 707

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/436 (35%), Positives = 206/436 (47%), Gaps = 92/436 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 196
           R  R T  QIQ+LE+ F+ C HP+   R EL+ +  LE RQVK                 
Sbjct: 71  RTKRFTMDQIQQLEAQFRVCRHPNLDARQELAAKTGLEERQVKACGD------------- 117

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 256
           EN  +RQE  KL+AEN  ++  M NPIC  C  P +    + E++ L  ENARL+DE  R
Sbjct: 118 ENKGIRQELGKLKAENEELKQRMLNPICFRCRNPTLATQPTSEKRRLLNENARLRDEYVR 177

Query: 257 VCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALP 316
             A   + +         P   ++ L LG                               
Sbjct: 178 AKAYLDRLIREGAERRASP---SAHLHLG------------------------------- 203

Query: 317 VVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNH 376
                     G   L    ER         AM+ELV +A   EP+W+ + +G   + LNH
Sbjct: 204 ----------GSATLVSHAER---------AMEELVMLATKGEPMWLPAMDG---ETLNH 241

Query: 377 EEY-LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
           +EY L+TF   +GL P GFV EA+RE+  +   ++ LV  L D N+W EMFP        
Sbjct: 242 QEYVLQTFPGLLGLCPPGFVEEATRESDTIRGTAMYLVSVLTDANQWCEMFP-------- 293

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-DTI 494
                        G +  M AEL V SP +  R V FLRF K+ +   WA+ DVS+ D +
Sbjct: 294 -------------GTVAYMDAELWVQSPRLLNRSVKFLRFSKKLSNRRWAMADVSVVDGV 340

Query: 495 RETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGA 554
                  +   CR LPSGC+++DM  GY KVTWV HAEYDE+ V  L++P + SG   GA
Sbjct: 341 CGVEPGGSSTGCRLLPSGCLLEDMSGGYCKVTWVVHAEYDETSVPSLFRPFLQSGQALGA 400

Query: 555 QRWVATLQRQCECLAI 570
            RW+  LQRQCE + +
Sbjct: 401 YRWLRCLQRQCEYITV 416


>gi|413952729|gb|AFW85378.1| hypothetical protein ZEAMMB73_822854 [Zea mays]
          Length = 548

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 190/316 (60%), Gaps = 22/316 (6%)

Query: 275 PPMPN---SSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
           PP+P    SSL+L VG +            +L  D  +G S+ LP  MP   +       
Sbjct: 2   PPVPTMSVSSLDLSVGGMP----GQGLGGPSLDLDLLSGCSSGLPYHMPAPVT------- 50

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT-PCIGLK 390
              +ER M +++A  AMDEL+++AQ  E +W++   G  R+VL+   Y   F  P    +
Sbjct: 51  --EMERPMMVDMATRAMDELIRLAQAGEQIWVQGMPGDAREVLDVATYDSLFAKPGGAFR 108

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGA 450
           P     E SR++G+V ++++ALV+  MD N+W E FP ++++  T DV+ +G+ G R+ +
Sbjct: 109 PPEINVEGSRDSGLVFMSAVALVDVFMDTNKWMEFFPGIVSKAQTVDVLVNGLCG-RSES 167

Query: 451 LQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS-GAPAFVNCRRL 509
           L +M+ EL +++P+VP RE++FLR+CKQ  +G+WAV DVS+D  R+   G P+    RR+
Sbjct: 168 LIMMYEELHIMTPVVPTRELSFLRYCKQIEQGLWAVADVSLDGQRDAHYGVPS--RSRRM 225

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           PSGC++ DM NGYSKVTWVEH E +    ++ LY+ L++SG  FGA RW+A LQR CE  
Sbjct: 226 PSGCLIADMSNGYSKVTWVEHLEIEHMLPINVLYRNLVLSGAAFGAHRWLAALQRACERF 285

Query: 569 AILMSTSVSARDHTGI 584
           A L +  V   D  G+
Sbjct: 286 ASLATLGVPHHDVAGV 301


>gi|338797899|gb|AEI99593.1| HD-Zip IV transcription factor GL9H1 [Triticum durum]
          Length = 674

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/471 (32%), Positives = 225/471 (47%), Gaps = 70/471 (14%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
           S+S SD  DGA G     +  P  K+R  R  PQQ Q LE  F  C HPDE QR+ +S+ 
Sbjct: 24  SQSNSDGQDGAEG-----SQQP--KRRLQRLNPQQTQVLEGFFGICAHPDENQRMGMSES 76

Query: 171 LCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG- 229
             L  +QVKFWFQN+RT MK    + E   ++ +N+ LR EN  +  A +   C  C   
Sbjct: 77  TGLTMQQVKFWFQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASAAKTAFCPACVAL 136

Query: 230 PAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTI 289
           P +  + S+E Q LR EN  LK +L ++ A A     RP              +L   T 
Sbjct: 137 PGL--NPSVEVQRLRQENESLKQQLSQLRAEAHPSSSRP-------------FQLDPSTE 181

Query: 290 NGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMD 349
           N  G                                       R  +     ELA +AM 
Sbjct: 182 NIIG---------------------------------------RENDMDAIAELAQSAMH 202

Query: 350 ELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINS 409
           E V ++++  PLW+    G    VLN   Y +TF         GF+TEA+R  GMV++++
Sbjct: 203 EFVVLSESGGPLWM-PVPGGSLDVLNKMAYAQTFGAGSSANAIGFMTEATRADGMVMMDA 261

Query: 410 LALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVRE 469
             +V+ +MD   +    P ++    TT V         NGA+ LM  E    SPLVP R+
Sbjct: 262 KQIVDYIMDSECYTSFCPGLVTSANTTKVYKWPTSAGYNGAMHLMTVETVFPSPLVPSRK 321

Query: 470 VNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVE 529
             F+R C+    G   +VDVS+D     +G   F  C ++PSG +++ + +  S+VT VE
Sbjct: 322 CTFVRCCRDMQNGTVIIVDVSLD-----NGDGTF-KCHKMPSGILIRSLNSDASQVTVVE 375

Query: 530 HAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           H + +++ VH+LY+P  +SG+ FGA+RWV+++ RQ   +  L   S SA +
Sbjct: 376 HVQVNDTGVHELYRP-SLSGLMFGARRWVSSIVRQSARMRDLFIVSKSASN 425


>gi|255571291|ref|XP_002526595.1| Homeobox protein GLABRA2, putative [Ricinus communis]
 gi|223534089|gb|EEF35807.1| Homeobox protein GLABRA2, putative [Ricinus communis]
          Length = 546

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 166/253 (65%), Gaps = 9/253 (3%)

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGF 394
           +E+++  E A +AM+EL+++ +  EPLWI+S +  G+ V++ + Y + F      K +  
Sbjct: 48  MEKALMHETAASAMEELIRLLRISEPLWIKS-QSDGKYVIHRDSYDKVFPRTNHFKGSNA 106

Query: 395 VTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 454
             E+S+E+ MV IN+L LVE  +DPN+W ++FP ++ + +   V+ +GM G R+G+LQLM
Sbjct: 107 RIESSKESVMVAINALNLVEIFLDPNKWVDLFPTIVTKASIIQVLETGMLGNRSGSLQLM 166

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCR--RLPSG 512
           + ++ +LSPLVP RE  FLR C+Q     W + DVS D ++ET      ++ R  +LPSG
Sbjct: 167 YEQMHILSPLVPPREFYFLRHCQQIEGATWVIADVSYDCLKET-----ILSSRSWKLPSG 221

Query: 513 CVVQDMPNGYSKVTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           C+++++PNG+SKVTW+EH E D+ +Q H+LY+ LI     +GA+RW+A LQR CE LA  
Sbjct: 222 CMIEELPNGFSKVTWIEHVEVDDKTQTHRLYRDLICGSSAYGAERWIAALQRVCERLAFS 281

Query: 572 MSTSVSARDHTGI 584
              ++  RD  G+
Sbjct: 282 FRETLPTRDFGGV 294


>gi|22023157|gb|AAM88945.1|AF317882_1 transcription factor 1 [Oryza sativa]
          Length = 709

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 208/434 (47%), Gaps = 61/434 (14%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  RK+R  R T +Q + LE  F  C HPD+ Q+  LS+   L   QVKFWFQN+RTQ+K
Sbjct: 63  NEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK 122

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
           T   + EN  L  EN+ LR EN  ++ A    +C  C   ++   +++E + L  ++  L
Sbjct: 123 TMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWL 182

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTG 310
           + E+ R              S G PP  N + +L       F G                
Sbjct: 183 QQEIAR--------------SNGTPPAANLAFQLNSSADYVFSGQH-------------- 214

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
                                    ++ M  ELA  AM  L+ +A++   LW     G  
Sbjct: 215 -------------------------DQQMIAELAKNAMHALIILAESHVALWF-PVPGCS 248

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
            +VLN   Y + +         GF TEA+R   MV+++  ++V+ LMDP  +   FP +I
Sbjct: 249 YEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVI 308

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           +   T  + +       NG +QLM  E+   SPLVP R+  FLR+C    EG+  V+DVS
Sbjct: 309 SGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVS 368

Query: 491 IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           +D          F  CR++PSG ++Q +     KVT +EH   D++ VH+LY+P  ++G+
Sbjct: 369 LD------DGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPR-VNGL 421

Query: 551 GFGAQRWVATLQRQ 564
            FGA+RWVAT+ RQ
Sbjct: 422 VFGARRWVATMARQ 435


>gi|115440407|ref|NP_001044483.1| Os01g0788800 [Oryza sativa Japonica Group]
 gi|75252913|sp|Q5ZAY0.1|TF1_ORYSJ RecName: Full=Homeobox-leucine zipper protein TF1; AltName:
           Full=HD-ZIP protein TF1; AltName: Full=Homeodomain
           transcription factor TF1; AltName: Full=Protein
           TRANSCRIPTION FACTOR 1; Short=OsTF1
 gi|53792430|dbj|BAD53268.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784272|dbj|BAD81954.1| transcription factor 1 [Oryza sativa Japonica Group]
 gi|113534014|dbj|BAF06397.1| Os01g0788800 [Oryza sativa Japonica Group]
          Length = 709

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/434 (32%), Positives = 208/434 (47%), Gaps = 61/434 (14%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  RK+R  R T +Q + LE  F  C HPD+ Q+  LS+   L   QVKFWFQN+RTQ+K
Sbjct: 63  NEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK 122

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
           T   + EN  L  EN+ LR EN  ++ A    +C  C   ++   +++E + L  ++  L
Sbjct: 123 TMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWL 182

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTG 310
           + E+ R              S G PP  N + +L       F G                
Sbjct: 183 QQEIAR--------------SNGTPPAANLAFQLNSSADYVFSGQH-------------- 214

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
                                    ++ M  ELA  AM  L+ +A++   LW     G  
Sbjct: 215 -------------------------DQQMIAELAKNAMHALIILAESHVALWF-PVPGCS 248

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
            +VLN   Y + +         GF TEA+R   MV+++  ++V+ LMDP  +   FP +I
Sbjct: 249 YEVLNKMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVI 308

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           +   T  + +       NG +QLM  E+   SPLVP R+  FLR+C    EG+  V+DVS
Sbjct: 309 SGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVS 368

Query: 491 IDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGM 550
           +D          F  CR++PSG ++Q +     KVT +EH   D++ VH+LY+P  ++G+
Sbjct: 369 LD------DGSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP-CMNGL 421

Query: 551 GFGAQRWVATLQRQ 564
            FGA+RWVAT+ RQ
Sbjct: 422 VFGARRWVATMARQ 435


>gi|125527992|gb|EAY76106.1| hypothetical protein OsI_04032 [Oryza sativa Indica Group]
          Length = 736

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 208/435 (47%), Gaps = 62/435 (14%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  RK+R  R T +Q + LE  F  C HPD+ Q+  LS+   L   QVKFWFQN+RTQ+K
Sbjct: 63  NEKRKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVK 122

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
           T   + EN  L  EN+ LR EN  ++ A    IC  C   ++   +++E + L  ++  L
Sbjct: 123 TMCWKEENYKLSVENEILRDENRRVKIAHCTAICLTCRNSSVQNQLAVEMERLMGQSEWL 182

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTG 310
           + E+ R              S G PP  N + +L       F G                
Sbjct: 183 QQEIAR--------------SNGTPPAANLAFQLNSSADYVFSGQH-------------- 214

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
                                    ++ M  ELA  AM  L+ +A++   LW     G  
Sbjct: 215 -------------------------DQQMIAELAKNAMHALIILAESHVALWF-PVPGCA 248

Query: 371 RQVLNHE-EYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
            +VLN    Y + +         GF TEA+R   MV+++  ++V+ LMDP  +   FP +
Sbjct: 249 YEVLNKMMAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEV 308

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
           I+   T  + +       NG +QLM  E+   SPLVP R+  FLR+C    EG+  V+DV
Sbjct: 309 ISGAVTNRIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDV 368

Query: 490 SIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG 549
           S+D          F  CR++PSG ++Q +     KVT +EH   D++ VH+LY+P  ++G
Sbjct: 369 SLDD------GSIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP-CMNG 421

Query: 550 MGFGAQRWVATLQRQ 564
           + FGA+RWVAT+ RQ
Sbjct: 422 LVFGARRWVATMARQ 436


>gi|338797895|gb|AEI99591.1| HD-Zip IV transcription factor GL9H2 [Triticum durum]
          Length = 683

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/486 (31%), Positives = 230/486 (47%), Gaps = 72/486 (14%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           GRR +    +  +R    ++   + D  D A+    K+R  R TPQQ Q LE  F  C H
Sbjct: 7   GRRRKAPQQDRPARDNDLDISQGNSDGQDGAEGSQPKRRLQRLTPQQTQVLEGFFGICAH 66

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PDE QR+ +S+   L  +QV+FWFQN+RT MK    + E   ++ +N+ LR EN  +  A
Sbjct: 67  PDENQRMGMSESTGLTMQQVRFWFQNKRTHMKHVTGKEETYRMKAQNEMLREENKRLASA 126

Query: 219 MRNPICTNCGGPAIIG-DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPM 277
            +   C +C   A+ G   S E Q LR EN +LK +L ++ A A     RP      P M
Sbjct: 127 AKTSFCPSC--VALPGLSPSGEVQRLRQENEQLKQQLSQLRAEAHPSSSRPFQL--DPSM 182

Query: 278 PNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIER 337
            N                                                +TG  R  + 
Sbjct: 183 EN------------------------------------------------ITG--RENDM 192

Query: 338 SMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPN----- 392
               ELA +AM E V +A+   PLW+    G    VLN   Y +TF    G + +     
Sbjct: 193 DAIAELAQSAMHEFVVLAEAGGPLWM-PVPGGSFDVLNKMAYAQTF----GARSSANVIL 247

Query: 393 GFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           GF+TEA+R   MV++++  +V+ +MD   +    P ++    TT +         NGA+ 
Sbjct: 248 GFMTEATRADDMVMMDAKQIVDYIMDSECYTSFCPGLLTSANTTKIYKWPTSAGYNGAMH 307

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSG 512
           L+  E    SPLVP R+  F+R C+    G   +VDVS+D    T      V C ++PSG
Sbjct: 308 LVTVETVFPSPLVPSRKCTFVRCCRDMQNGTVIIVDVSLDNGDGT------VKCHKMPSG 361

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
            +V+ + +  S+VT +EH + +++ +H+LY+P  +SG+ FGA+RWV+++ RQ   +  L 
Sbjct: 362 VLVRSLNSDASQVTVIEHVQVNDTGLHELYRP-SLSGLMFGARRWVSSIVRQSARMRDLF 420

Query: 573 STSVSA 578
             S SA
Sbjct: 421 VVSKSA 426


>gi|326505944|dbj|BAJ91211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 444

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/212 (54%), Positives = 150/212 (70%), Gaps = 5/212 (2%)

Query: 280 SSLELGVGTINGFGGLSSTVTTTLPADFGTGISNA-LPVVMPPNRSGPGVTGLDRSIERS 338
           S L+L VG+ NGF G+      ++P   G G +   LP  M       G+ G   SI+R 
Sbjct: 110 SGLDLAVGSNNGFMGMG---MQSIPDLMGGGSAAMRLPAGMMGGGLDDGLGGEGVSIDRD 166

Query: 339 MFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEA 398
             LEL LAAM+ELVK+ Q D+PLW  S E  G + LN++EY R F   +G  P G+V+EA
Sbjct: 167 ALLELGLAAMEELVKVTQVDDPLWQPSLE-IGIETLNYDEYRRAFARVLGPSPAGYVSEA 225

Query: 399 SRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAEL 458
           +RE G+ IINS+ LV +LM+  RW+EMFPC++AR +T ++ISSGMGGTR+G++QLM AEL
Sbjct: 226 TREVGIAIINSVDLVNSLMNEARWSEMFPCVVARASTMEIISSGMGGTRSGSIQLMRAEL 285

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
           QVLSPLVP+REV FLRFCKQHA+G+WA+VDVS
Sbjct: 286 QVLSPLVPIREVTFLRFCKQHADGLWAIVDVS 317


>gi|53792431|dbj|BAD53269.1| putative transcription factor 1 [Oryza sativa Japonica Group]
 gi|56784273|dbj|BAD81955.1| putative transcription factor 1 [Oryza sativa Japonica Group]
          Length = 629

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 197/416 (47%), Gaps = 61/416 (14%)

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           +   F  C HPD+ Q+  LS+   L   QVKFWFQN+RTQ+KT   + EN  L  EN+ L
Sbjct: 1   MNRFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEIL 60

Query: 209 RAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRP 268
           R EN  ++ A    +C  C   ++   +++E + L  ++  L+ E+ R            
Sbjct: 61  RDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIAR------------ 108

Query: 269 VSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGV 328
             S G PP  N + +L       F G                                  
Sbjct: 109 --SNGTPPAANLAFQLNSSADYVFSGQH-------------------------------- 134

Query: 329 TGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIG 388
                  ++ M  ELA  AM  L+ +A++   LW     G   +VLN   Y + +     
Sbjct: 135 -------DQQMIAELAKNAMHALIILAESHVALWF-PVPGCSYEVLNKMAYDQAYPGDNS 186

Query: 389 LKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN 448
               GF TEA+R   MV+++  ++V+ LMDP  +   FP +I+   T  + +       N
Sbjct: 187 ANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYN 246

Query: 449 GALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRR 508
           G +QLM  E+   SPLVP R+  FLR+C    EG+  V+DVS+D          F  CR+
Sbjct: 247 GVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLD------DGSIFSKCRK 300

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
           +PSG ++Q +     KVT +EH   D++ VH+LY+P  ++G+ FGA+RWVAT+ RQ
Sbjct: 301 MPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP-CMNGLVFGARRWVATMARQ 355


>gi|125572285|gb|EAZ13800.1| hypothetical protein OsJ_03723 [Oryza sativa Japonica Group]
          Length = 679

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 196/413 (47%), Gaps = 61/413 (14%)

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAE 211
            F  C HPD+ Q+  LS+   L   QVKFWFQN+RTQ+KT   + EN  L  EN+ LR E
Sbjct: 28  FFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEILRDE 87

Query: 212 NMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSS 271
           N  ++ A    +C  C   ++   +++E + L  ++  L+ E+ R              S
Sbjct: 88  NRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIAR--------------S 133

Query: 272 MGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGL 331
            G PP  N + +L       F G                                     
Sbjct: 134 NGTPPAANLAFQLNSSADYVFSGQH----------------------------------- 158

Query: 332 DRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKP 391
               ++ M  ELA  AM  L+ +A++   LW     G   +VLN   Y + +        
Sbjct: 159 ----DQQMIAELAKNAMHALIILAESHVALWF-PVPGCSYEVLNKMAYDQAYPGDNSANA 213

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
            GF TEA+R   MV+++  ++V+ LMDP  +   FP +I+   T  + +       NG +
Sbjct: 214 IGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWPTSDGYNGVI 273

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPS 511
           QLM  E+   SPLVP R+  FLR+C    EG+  V+DVS+D          F  CR++PS
Sbjct: 274 QLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD------GSIFSKCRKMPS 327

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
           G ++Q +     KVT +EH   D++ VH+LY+P  ++G+ FGA+RWVAT+ RQ
Sbjct: 328 GFLIQSIRPNSCKVTAIEHVLADDTGVHELYQP-CMNGLVFGARRWVATMARQ 379


>gi|224124266|ref|XP_002319288.1| predicted protein [Populus trichocarpa]
 gi|222857664|gb|EEE95211.1| predicted protein [Populus trichocarpa]
          Length = 438

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 6/238 (2%)

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV-TEASR 400
           E+A++AMDELV+     EPLW +  +  G ++LN  EY+R F P        F+ TEASR
Sbjct: 21  EMAVSAMDELVRKCLAGEPLW-QHRQDCGLEILNEGEYIREFRPFDANAEKNFLQTEASR 79

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQV 460
             G V +++ +LVE LMD  +W+ +F  +++RT    V+S G+ G  N  LQ+M AE  +
Sbjct: 80  HIGFVRMDATSLVECLMDVKQWSSVFSNIVSRTTVLGVLSRGVAGNYNETLQVMKAEFHM 139

Query: 461 LSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPN 520
            +PLV +RE  F R+CKQ   G W VVDVS+D++         V  RR PSGC++ +MP+
Sbjct: 140 PTPLVNIRESQFARYCKQIGPGTWGVVDVSLDSLFPY----PLVIFRRRPSGCLIVEMPD 195

Query: 521 GYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
           GYSKV WVEH E D   VH+++ P+++ G  F A RWVA++ R CE +  ++STS+ +
Sbjct: 196 GYSKVIWVEHVEVDNKFVHRMFWPIVLPGFAFSAMRWVASIVRHCEPVGNIISTSLDS 253


>gi|345195200|tpg|DAA34965.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
          Length = 611

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 156/257 (60%), Gaps = 27/257 (10%)

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHE---EYLRTFTPCIGLKPNGFVTEASR 400
           A AAMD+ + +A   EPLW+ +      + LN++   ++ +      GL P+ FV EASR
Sbjct: 209 AEAAMDQFLLLATKGEPLWLPTTPDG--EALNYQLGYKHKKALPVHHGLCPDEFVMEASR 266

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIAR-TATTDVISSGMGGTRNGALQLMHAELQ 459
            TG+V  ++  LV TL D  RW+EMFP ++A  TA  D   SG  G     +QLM+AELQ
Sbjct: 267 ATGVVRASATYLVATLTDARRWSEMFPSVVASVTARRDAAISG--GVFGSHIQLMNAELQ 324

Query: 460 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA------------------P 501
           V SP +  R +NFLR+ K+ AEG WAV+DVS+D I    G+                  P
Sbjct: 325 VHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVP 384

Query: 502 A-FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 560
           A +  CR LPSGC+V+DM NGY KVTWV HAEYDE+ V  +++PL  SG   GA RW+A+
Sbjct: 385 AWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLAS 444

Query: 561 LQRQCECLAILMSTSVS 577
           LQRQCE LA+L S+ VS
Sbjct: 445 LQRQCEFLAVLHSSQVS 461


>gi|414884340|tpg|DAA60354.1| TPA: hypothetical protein ZEAMMB73_058304 [Zea mays]
          Length = 623

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 156/257 (60%), Gaps = 27/257 (10%)

Query: 344 ALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHE---EYLRTFTPCIGLKPNGFVTEASR 400
           A AAMD+ + +A   EPLW+ +      + LN++   ++ +      GL P+ FV EASR
Sbjct: 96  AEAAMDQFLLLATKGEPLWLPTTPDG--EALNYQLGYKHKKALPVHHGLCPDEFVMEASR 153

Query: 401 ETGMVIINSLALVETLMDPNRWAEMFPCMIAR-TATTDVISSGMGGTRNGALQLMHAELQ 459
            TG+V  ++  LV TL D  RW+EMFP ++A  TA  D   SG  G     +QLM+AELQ
Sbjct: 154 ATGVVRASATYLVATLTDARRWSEMFPSVVASVTARRDAAISG--GVFGSHIQLMNAELQ 211

Query: 460 VLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA------------------P 501
           V SP +  R +NFLR+ K+ AEG WAV+DVS+D I    G+                  P
Sbjct: 212 VHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAANGVTLVP 271

Query: 502 A-FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 560
           A +  CR LPSGC+V+DM NGY KVTWV HAEYDE+ V  +++PL  SG   GA RW+A+
Sbjct: 272 AWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGAHRWLAS 331

Query: 561 LQRQCECLAILMSTSVS 577
           LQRQCE LA+L S+ VS
Sbjct: 332 LQRQCEFLAVLHSSQVS 348


>gi|338797897|gb|AEI99592.1| HD-Zip IV transcription factor GL9 [Triticum aestivum]
          Length = 670

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 226/475 (47%), Gaps = 79/475 (16%)

Query: 112 RSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           +S SD  DGA G           K+R  R  PQQ Q LE  F  C HPDE QR+ LS+  
Sbjct: 25  QSNSDGHDGAEGSQ--------PKRRLQRLNPQQTQVLEGFFSICAHPDENQRMGLSEST 76

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPA 231
            L  +QVKFWFQN+RT MK    + E+  ++ +N+ LR EN  +  A +   C +C   A
Sbjct: 77  GLSMQQVKFWFQNKRTYMKHLTGKEESYRMKAQNEMLREENKRLASAAKASFCPSC--VA 134

Query: 232 IIG-DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTIN 290
           + G + S+E Q L+ EN  L+ ++ ++ A A +     V+ +G     ++  EL    ++
Sbjct: 135 LPGQNPSVEVQRLKEENESLRQQVSQLRAEAHQLDPSTVNIIGRENDIDAIAELVQNAMH 194

Query: 291 GFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDE 350
            F  LS +                 P+ MP     PG                   ++D 
Sbjct: 195 EFVVLSES---------------GGPLWMPV----PG------------------GSLDL 217

Query: 351 LVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSL 410
           L K+A                       Y +TF         GF  EA+R  GMV++ + 
Sbjct: 218 LNKVA-----------------------YAQTFGARSSANAIGFRVEATRADGMVMMEAK 254

Query: 411 ALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREV 470
            +V+ +MD   +    P  +    TT +         NGA+ LM AE    SPLVP R+ 
Sbjct: 255 QIVDYIMDSECYTSFCPGTLTSAKTTKIYKWPTNAGYNGAMHLMTAETVFPSPLVPSRKC 314

Query: 471 NFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
            F+R C+    G   +VDVS+D     +G   F  CR++PSG +++ + +  S+VT +EH
Sbjct: 315 TFVRCCRGMQNGTVIIVDVSLD-----NGDGTFFKCRKMPSGLLIRSLNSDASQVTVIEH 369

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL--AILMSTSVSARDHTG 583
            + +++ VH+LY+P  +SG+ FGA+RW+++++RQ   +    L++ S SA +  G
Sbjct: 370 VQVNDAGVHELYRP-TLSGLMFGARRWLSSIERQSARMRDLFLLTQSTSAANMNG 423


>gi|115474701|ref|NP_001060947.1| Os08g0136100 [Oryza sativa Japonica Group]
 gi|31339107|dbj|BAC77160.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113622916|dbj|BAF22861.1| Os08g0136100, partial [Oryza sativa Japonica Group]
          Length = 130

 Score =  200 bits (509), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/130 (70%), Positives = 108/130 (83%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RKKRYHRHT  QIQELE+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMKTQ 
Sbjct: 1   RKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 60

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ERHEN+ LR EN+KLRAENM  ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE
Sbjct: 61  ERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDE 120

Query: 254 LDRVCALAGK 263
           +DR+ A+A K
Sbjct: 121 IDRISAIAAK 130


>gi|449533164|ref|XP_004173547.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like, partial
           [Cucumis sativus]
          Length = 365

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 198/397 (49%), Gaps = 79/397 (19%)

Query: 55  PQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIG--RRSREDLLEHE-- 110
           P   +K  F+SP LSL L    I  +   ++    M E  +G +G  RR   D +  E  
Sbjct: 14  PLAFTKDFFSSPALSLTL--AGIFRRSDHEVGDVEMEEVDDGSVGGARRDNHDTMTAEVS 71

Query: 111 ---------SRSGSDNMDGASGDDLDAADNP--------PRKKRYHRHTPQQIQELESLF 153
                    SRS  +  +   G   D  +N          R+K+YHRHT +QI+E+E+LF
Sbjct: 72  SENSGPVVRSRSEEEEEEEEEGGGQDDQENELVDHGCQLKRRKKYHRHTTEQIREMEALF 131

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           KE PHPDEKQR +LSKRL L  RQVKFWFQNRRTQ+K   ERHEN+LL+ E +KLR EN 
Sbjct: 132 KESPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIKAIQERHENTLLKAEMEKLREENK 191

Query: 214 SIRDAMRNPI-CTNCGGPAIIGD--ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVS 270
           ++R+  +  I C NCG      D  +    + LRI+NA+LK E++++ A  GK+   P +
Sbjct: 192 AMREISKKKIGCPNCGTADATQDDLVFTTTEQLRIKNAKLKAEVEKLRAALGKY---PQA 248

Query: 271 SMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTG 330
           +  P    +              G     +  +  DF TGI                   
Sbjct: 249 AASPSTYSS--------------GNEQETSNRICLDFYTGIF------------------ 276

Query: 331 LDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFT------ 384
               +E S  +E    A++EL  MA   +PLW+RS E +GR++LN++EYL+TF       
Sbjct: 277 ---GLENSRIMEKVDEAVEELKTMAAAGDPLWVRSVE-TGREILNYDEYLKTFQFSNNNS 332

Query: 385 ---PCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
               C+         EASRET +V +    LV++ MD
Sbjct: 333 NTRNCLKTH-----IEASRETALVFMEPSRLVQSFMD 364


>gi|60099371|dbj|BAD89976.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 397

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 173/317 (54%), Gaps = 66/317 (20%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           GA+G+      N  ++K+YHRHT  QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVK
Sbjct: 88  GAAGN---KGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVK 144

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR--NPICTNCGGPAIIGDIS 237
           FWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++    N  C NCGG        
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP------ 198

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNS---SLELGVGTINGFGG 294
                L +EN++LK ELD++ A  G+          P P+  S     E  +G++     
Sbjct: 199 ---DDLHLENSKLKAELDKLRAALGR---------TPYPLQASCSDDQEHRLGSL----- 241

Query: 295 LSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM 354
                      DF TG+                      ++E+S   E++  A  EL KM
Sbjct: 242 -----------DFYTGVF---------------------ALEKSRIAEISNRATLELQKM 269

Query: 355 AQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLK-PNGFVTEASRETGMVIINSLALV 413
           A + EP+W+RS E +GR++LN++EYL+ F        P     EASR+ G+V +++  L 
Sbjct: 270 ATSGEPMWLRSVE-TGREILNYDEYLKEFPQAQASSFPGRKTIEASRDAGIVFMDAHKLA 328

Query: 414 ETLMDPNRWAEMFPCMI 430
           ++ MD  +W E F CM+
Sbjct: 329 QSFMDVGQWKETF-CML 344


>gi|124359623|gb|ABN06007.1| Homeodomain-related [Medicago truncatula]
          Length = 365

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 147/248 (59%), Gaps = 43/248 (17%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           YHRHT +QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVKFWFQNRRTQ+K   ERHE
Sbjct: 143 YHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHE 202

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI--IGDISLEEQHLRIENARLKDELD 255
           NSLL+ E +KLR +N ++R+ +    C NCG P     G ++ EEQ LRIENA+LK E++
Sbjct: 203 NSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGTMATEEQQLRIENAKLKAEVE 262

Query: 256 RVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNAL 315
           R+ A  GK+      +M P             T +    + S++      DF TGI    
Sbjct: 263 RLRAALGKYAS---GTMSP----------SCSTSHDQENIKSSL------DFYTGIF--- 300

Query: 316 PVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLN 375
                              ++ S  +++   AM+EL+KMA   EP+W+RS E +GR++LN
Sbjct: 301 ------------------CLDESRIMDVVNQAMEELIKMATMGEPMWLRSLE-TGREILN 341

Query: 376 HEEYLRTF 383
           ++EY++ F
Sbjct: 342 YDEYMKEF 349


>gi|356528154|ref|XP_003532670.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 793

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 152/259 (58%), Gaps = 6/259 (2%)

Query: 328 VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCI 387
           +  L + ++    L++A  AM+EL+K+   +EP W RS    G+  L H+ Y R F    
Sbjct: 293 MKSLSKDMDSVQMLKIAEDAMEELMKLLSLNEPFWFRSLL-DGKFNLRHDCYKRIFGRSN 351

Query: 388 GLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTR 447
            L       E+S+++ +V ++   LVE  ++ ++W ++FP ++ +  T  V+ SG  G R
Sbjct: 352 CLSGPHVRMESSKDSRVVKMSGAQLVEMFLNSDKWVDLFPTIVKKAQTIQVLESGSSGNR 411

Query: 448 NGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCR 507
           NGALQL++AE+ +LS LVP RE  FLR+CKQ   G+WA+ DVSID+   ++      + R
Sbjct: 412 NGALQLVNAEMHILSHLVPSREFLFLRYCKQIEVGIWAIGDVSIDS---STYKTTVSHAR 468

Query: 508 RLPSGCVVQDMPN-GYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           RLPSGC++Q+  + G   V+W+EH E +E  Q H L++  I     +GA RWV TL+R C
Sbjct: 469 RLPSGCLIQEKSSEGLCMVSWMEHVEVNEKMQTHNLFRDTICGNNAYGADRWVMTLERMC 528

Query: 566 ECLAILMSTSVSARDHTGI 584
           E  A   + ++ + +  G+
Sbjct: 529 ERFASYSAKTIPSCETGGV 547



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 65/98 (66%), Gaps = 3/98 (3%)

Query: 138 YH---RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           YH   RH   ++  LE +FKEC HP+E +R ++ + L L+  QVKFWFQN++T ++T  E
Sbjct: 18  YHWRNRHGRDKVARLEEIFKECTHPNEVRRRQIGEELGLDPEQVKFWFQNKKTHIRTINE 77

Query: 195 RHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           R +   LR EN+++++EN  +R+ + N  C +CGG A+
Sbjct: 78  RLDTDALRLENERIQSENNKMRETLENLSCGSCGGRAM 115


>gi|345195186|tpg|DAA34958.1| TPA_exp: homeodomain leucine zipper family IV protein [Zea mays]
 gi|414880175|tpg|DAA57306.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 701

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 210/451 (46%), Gaps = 67/451 (14%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D    D P  KK  HR T QQ++ LE  F  C HPD+ QR +LS+   L   QVKFWFQN
Sbjct: 101 DRQQQDGPQPKKLLHRVTSQQLEILEGFFSICAHPDDSQRKQLSESTGLSVHQVKFWFQN 160

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           +                     +   +++S R+                     E   L+
Sbjct: 161 K---------------------RTHVKHLSGRE---------------------ENYRLK 178

Query: 245 IENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLP 304
           +EN  LK+E +R+   A      P  +  P  + ++   L    +     L +       
Sbjct: 179 VENEMLKEENNRLIRQAQSNAPAPAPAPCPRCINDAGHLLLEKEVER---LKALNQMLQQ 235

Query: 305 ADFGTGISNALPVVMPPNRSGPGVTGLDRSIER--------SMFLELALAAMDELVKMAQ 356
                G     PV + P  SG      + S+E          M  +LA  A  EL+ +A 
Sbjct: 236 ELQLQGTEGETPVAVDPA-SGAFHPDPEPSLENVFAAQHDGQMLAKLAENAAQELLVLAD 294

Query: 357 TDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETL 416
            + PLW+    G   + LN   Y +TF   + +      TEA+R +G+V+++  +LVE L
Sbjct: 295 PESPLWL-PVPGGSFETLNMIAYAQTFPGQMSVDAIALKTEATRASGVVMLDPKSLVEFL 353

Query: 417 MDPNRWAEMFPCMIARTATTDVIS--SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
           MD   +  MFP +++  AT  V +  +    + +GA+Q+M  EL   SPLV  R+  F+R
Sbjct: 354 MDAESYGTMFPGLVSGAATDKVYNWPTSREESYDGAVQMMTVELAFPSPLVAARKCTFVR 413

Query: 475 FCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
            CK+  +G +AVVDVS+D      GA     CR++PSG ++Q +     KV+ ++H   D
Sbjct: 414 CCKKLEQGAFAVVDVSLD-----DGA----RCRKMPSGMLIQPIRYNSCKVSAIDHVRVD 464

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           ++ +H ++ P  +SG+ FGA+RWV ++ RQC
Sbjct: 465 DTSIHDIFHP-CLSGVLFGARRWVTSMARQC 494


>gi|115467006|ref|NP_001057102.1| Os06g0208100 [Oryza sativa Japonica Group]
 gi|31339109|dbj|BAC77161.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113595142|dbj|BAF19016.1| Os06g0208100, partial [Oryza sativa Japonica Group]
          Length = 129

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/130 (65%), Positives = 105/130 (80%), Gaps = 1/130 (0%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           R+KRYHRHTP+QIQ+LE++FKECPHPDE QR +LS+ L LE RQ+KFWFQNRRTQMK Q 
Sbjct: 1   RRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQH 60

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER +N  LR ENDK+R EN++IR+A++N IC  CGGP  +G+   +EQ LR+ENARLK+E
Sbjct: 61  ERADNCFLRAENDKIRCENIAIREALKNVICPTCGGPP-VGEDYFDEQKLRMENARLKEE 119

Query: 254 LDRVCALAGK 263
           LDRV  L  K
Sbjct: 120 LDRVSNLTSK 129


>gi|255563731|ref|XP_002522867.1| Homeobox protein FWA, putative [Ricinus communis]
 gi|223537951|gb|EEF39565.1| Homeobox protein FWA, putative [Ricinus communis]
          Length = 581

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 145/268 (54%), Gaps = 40/268 (14%)

Query: 342 ELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTP---------------- 385
           ELA +AM+EL++ A   +PLW R  + SG + LN  EY+R F                  
Sbjct: 72  ELANSAMEELLRKAFEGKPLWRRQID-SGIEFLNEAEYIREFRAFDATLREIMRMIEVED 130

Query: 386 --CI----------------GLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFP 427
             C+                G +     TEASRE G +  N+ ++VE LMD  +W+  F 
Sbjct: 131 PQCLSNLDIITTGSRHKHLRGFEQYVLQTEASREMGFIHANATSIVECLMDLKQWSSAFS 190

Query: 428 CMIARTATTDVISSG-MGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
            +++R      +S G M G  +  LQ++ AE  V +PLVP+RE  F R+CK+     W V
Sbjct: 191 KVVSRATLLGFLSVGSMVGNYDETLQVIRAEFHVPTPLVPIRECQFARYCKRLNSNTWGV 250

Query: 487 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           VDVS++ +         V  +R PSGC++Q++PNGYSKVTWVEH E D      +++PL+
Sbjct: 251 VDVSLENLFPY----PIVRFQRRPSGCLIQELPNGYSKVTWVEHVEVDNIVGSTIFQPLV 306

Query: 547 ISGMGFGAQRWVATLQRQCECLAILMST 574
           +SG  FGA+RW+A+L +  E +A LMS 
Sbjct: 307 LSGFAFGAKRWIASLIQHFERIATLMSV 334


>gi|356528152|ref|XP_003532669.1| PREDICTED: homeobox-leucine zipper protein HDG11-like [Glycine max]
          Length = 784

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 150/251 (59%), Gaps = 9/251 (3%)

Query: 335 IERSMFLELALAAMDELVKMAQTDEPLW-IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
           ++ +M  ++A  A++EL+K+   ++P W I  +    + VL  + Y         L    
Sbjct: 296 LDNAMMSQIANNAIEELIKLLDMNQPFWSIHDW----KLVLKRDNYQSILGRRHCLPGPH 351

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
              E+S+++ +V +N+  LV+  M+  +W ++FP ++ +  T  V+ +G+ G R+GAL L
Sbjct: 352 ARIESSKDSRIVDMNAEQLVQMFMNLEKWVDLFPTIVTKAQTIQVLENGLVGNRSGALLL 411

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           ++AE+ +LS LVP R+  FLR+CKQ  EGVW + DVSID++   +  P      R PSGC
Sbjct: 412 INAEMHILSHLVPTRQFYFLRYCKQIKEGVWVIGDVSIDSLEYKTIVPRI---WRRPSGC 468

Query: 514 VVQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILM 572
           ++Q+M +G  KV+WVEH E D+  Q HQL+  +I     +GA+RW++TL+R CE  A   
Sbjct: 469 LIQEMNHGLCKVSWVEHVEVDDKMQTHQLFTDVICCNNAYGAERWLSTLKRMCERFACAS 528

Query: 573 STSVSARDHTG 583
           + ++ + D +G
Sbjct: 529 AETIPSCDESG 539



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 196
           R +R     + +LE++F+ECP+P+E +R ++S+ L L   QVKFWFQNR+T++K   ER 
Sbjct: 11  RGNRLNHATVSKLEAIFRECPYPNENRRRQISEELELSLNQVKFWFQNRKTKLKAISERI 70

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGG-PAIIGDISLEEQHLRIENARLKDELD 255
           +N+ LR+EN+ +++EN+ +R++++N  C +CGG P    +  L+ Q L+ +N +L  E +
Sbjct: 71  DNNALRRENENIQSENLLMRESLQNAFCLSCGGLPVGSVERKLQLQSLKAKNIQLAKEYE 130

Query: 256 RVCAL 260
           RV AL
Sbjct: 131 RVYAL 135


>gi|242054643|ref|XP_002456467.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
 gi|241928442|gb|EES01587.1| hypothetical protein SORBIDRAFT_03g036820 [Sorghum bicolor]
          Length = 760

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/452 (30%), Positives = 205/452 (45%), Gaps = 75/452 (16%)

Query: 127 DAADNP-PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           D  D P P K+  HR T QQ++ LE  F  C HPD+ QR +LS+   L   QVKFWFQN+
Sbjct: 101 DRQDGPQPNKRSLHRVTSQQLETLEGFFSICAHPDDNQRRQLSESTGLLLHQVKFWFQNK 160

Query: 186 RTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRI 245
               +TQ+ +H N          R EN  ++                     +E + L+ 
Sbjct: 161 ----RTQV-KHLNG---------REENYKLK---------------------VENETLKE 185

Query: 246 ENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPA 305
           EN RLK   + + A                P P +   +  G +     +          
Sbjct: 186 ENNRLKQLQNNIIA----------------PAPCAKCIIDPGRLLLEKEVERLKELNQML 229

Query: 306 DFGTGISNALPVVMPPNR--SGPGVTGLDRSIE--------RSMFLELALAAMDELVKMA 355
                +  ++   +PP    S  G   LD  +E          M   LA  A  EL+ +A
Sbjct: 230 QQELQLLKSMDDGIPPMAMDSAVGNFHLDPLLENIFVVQHDEQMLANLAQNAAQELLILA 289

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
                LW+ +  G   + LN   Y  TF   +        TEA+R + +V+++  +LVE 
Sbjct: 290 NPSSALWL-NVPGGSFETLNMAAYTETFPGQMSADTITMNTEATRASAVVMLDPKSLVEF 348

Query: 416 LMDPNRWAEMFPCMIARTATTDVIS--SGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           LMD   +  MFP +++  ATT V S  +G     +GA+Q+M  EL   SPLV  R+  F+
Sbjct: 349 LMDAESYGTMFPGLVSAAATTKVYSCPTGREECYDGAMQMMTVELVFPSPLVAARKCTFV 408

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           R  K+  +G  AVVDVS+D      GA     CR++PSG V+Q +     KVT ++H   
Sbjct: 409 RCVKKLEQGAVAVVDVSLD-----DGA----RCRKMPSGLVIQPIRYNTCKVTAIDHVVV 459

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           D +  H L+ P  +SG+ FGA+RW+ ++ RQC
Sbjct: 460 DGTITHDLFAP-CLSGLLFGARRWLTSMARQC 490


>gi|449527811|ref|XP_004170903.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           GLABRA 2-like, partial [Cucumis sativus]
          Length = 416

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 81/166 (48%), Positives = 116/166 (69%), Gaps = 1/166 (0%)

Query: 420 NRWAEMFPCMIARTATTDVISSGMGGT-RNGALQLMHAELQVLSPLVPVREVNFLRFCKQ 478
           N+W EMFP MI++ AT DVI +G      NGA+QLM AE+Q+L+PLVP RE+ F+R CKQ
Sbjct: 1   NQWKEMFPFMISKAATVDVICNGEAAKWNNGAVQLMFAEVQMLTPLVPTREMYFIRHCKQ 60

Query: 479 HAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
                WA+VDVSI+ + + +   + V  R+ PSGC+++D PNG+ KVT VEH E  +++V
Sbjct: 61  LDAEQWAIVDVSIENVEDNNIDVSLVKYRKRPSGCIIKDEPNGHCKVTMVEHLECVKNKV 120

Query: 539 HQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           H LY+ ++ +G  FGA+ W+ATLQ QCE  A  M+T++  +D TG+
Sbjct: 121 HNLYRSIVNNGTAFGARHWMATLQLQCERSAFFMATNIPMKDSTGV 166


>gi|357129503|ref|XP_003566401.1| PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like
           [Brachypodium distachyon]
          Length = 375

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 160/311 (51%), Gaps = 33/311 (10%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR  + HR   +QIQ+LE++F++CPHPDE+ RL+LSKRL +   QVKFWFQNRR+  K +
Sbjct: 65  PRSSKRHRR--EQIQQLEAVFQQCPHPDEQLRLDLSKRLGMGLLQVKFWFQNRRSAKKNK 122

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI-IGDI--SLEEQHLRIENAR 249
           +E+ E   LR+EN+ L AEN +++  +++  C  CGGP + I D   + E+Q LR+ENA 
Sbjct: 123 MEQQEGKKLREENEMLLAENKAMKAEIQSRTCIGCGGPRMHIHDCRDTPEKQRLRMENAM 182

Query: 250 LKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGT 309
           LKD+L R         G+ V                           +      P     
Sbjct: 183 LKDQLMRTKVFVSVLTGKDVDDA-----------------AAAAEEGALPAAYSPYGLNN 225

Query: 310 GISNALPVVMPPNRSGPG----VTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRS 365
           G     P+V+ P  + P           +  +   L+  + A +E   +A  +EP+W+R+
Sbjct: 226 G---GRPLVINPAAAVPAPSMSSAARSIAASQITLLDHLIGACEEFKMIASMNEPMWLRT 282

Query: 366 FEGSGRQVLNHEEYLRTFTPCI-GLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAE 424
            +G    VLN++ Y     P I G+ P GF  + +R TG+V+ N+  L    MDP RW+E
Sbjct: 283 SDGD---VLNNQAYKNATYPGILGICPKGFAVDGTRTTGIVLGNAADLTSIFMDPARWSE 339

Query: 425 MFPCMIARTAT 435
           MFP +I    T
Sbjct: 340 MFPGIIVAGVT 350


>gi|449534134|ref|XP_004174022.1| PREDICTED: homeobox-leucine zipper protein ROC2-like, partial
           [Cucumis sativus]
          Length = 169

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 84/152 (55%), Positives = 114/152 (75%), Gaps = 5/152 (3%)

Query: 103 REDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEK 162
           RED  +  ++SG++ ++ A G   D      +KKRY+RHT  QIQE+E+ FKECPHPD+K
Sbjct: 22  REDDFD--NKSGAEILESACG--TDQQQQRSKKKRYNRHTQHQIQEMEAFFKECPHPDDK 77

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNP 222
           QR+ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN++L+ EN+KLRAEN+  R+A  + 
Sbjct: 78  QRMELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENIRYREAFAHS 137

Query: 223 ICTNCGGPAI-IGDISLEEQHLRIENARLKDE 253
            C NCG  +  +G++S ++QHLRIEN+RL+DE
Sbjct: 138 TCPNCGSSSTALGEMSFDDQHLRIENSRLRDE 169


>gi|357131135|ref|XP_003567196.1| PREDICTED: homeobox-leucine zipper protein TF1-like [Brachypodium
           distachyon]
          Length = 710

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 230/512 (44%), Gaps = 83/512 (16%)

Query: 87  LQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQI 146
           ++++ ES +  +G    E   E +S     N +G    D D  + P R+K+  R T QQ 
Sbjct: 1   MRQVSESEQQALGNEYYE---EQDSGILPSNGNGGPSADQDDPERPRRRKKLRRLTYQQN 57

Query: 147 QELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK---------------- 190
             LE  F  C HPD+ QR  LS    L  +QVKFWFQN+RT+ K                
Sbjct: 58  LILEGFFGICAHPDDSQRRHLSGATGLSMQQVKFWFQNKRTKAKLTIKYAFINYSFPVIS 117

Query: 191 ----TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIE 246
                 L + EN  L   N+KL AEN  +++A RN +C NC     IG  S  + +  +E
Sbjct: 118 LLLQNDLGKQENYDLIVYNNKLTAENRKLKEAHRNALCPNC-----IGSPSHHQVYAEME 172

Query: 247 NARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPAD 306
             RL++           FL + +S             L VG           +  +  + 
Sbjct: 173 --RLRE--------TNVFLKQQLS------------RLHVG-----------IQRSSSSS 199

Query: 307 FGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF 366
           F  G+S A   +   N             E  +   LA  AM E   +  T+ PLW+   
Sbjct: 200 FQFGMS-AEDAIAAQN-------------ETLIIAVLAEIAMREFGSLINTNGPLWL-PV 244

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
            G   ++LN   Y +           GF TEA+R   +V+++   +VE LMD   +    
Sbjct: 245 HGGSLEILNEGAYAQECDITNMANLIGFRTEATRAEAVVLMDPQNVVEYLMDSECYGSFC 304

Query: 427 PCMIARTATTDVIS-SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
           P +++   T  V S   + G  +GA+ LM  E    SPLVP R+  FLR C++   G   
Sbjct: 305 PGILSSAKTIKVYSWPSISGNYDGAMHLMTTETVFPSPLVPSRKCTFLRCCRELPGGAMV 364

Query: 486 VVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           +VD+S+D      G  +   C ++PSG ++Q +     KVT +EH    ++ +H+LY+P 
Sbjct: 365 IVDMSLD-----DGGGSSFKCCKMPSGVLIQPIMANSCKVTAIEHVRVVDTGLHELYQP- 418

Query: 546 IISGMGFGAQRWVATLQRQCECLAILMSTSVS 577
            ++G+ FGA+RWV ++ RQ   +  L   +V+
Sbjct: 419 CLTGLMFGARRWVESMARQSARMRALFDVNVN 450


>gi|359494019|ref|XP_002278971.2| PREDICTED: homeobox-leucine zipper protein HDG2-like [Vitis
           vinifera]
          Length = 659

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 36/268 (13%)

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF------------- 383
           +   ++L+ AA+ EL+KMA+  +PLW    +G   +VLNH EY + F             
Sbjct: 156 KQKIVDLSSAALKELLKMAKEKQPLWRDCIDG---EVLNHIEYTKQFGEIDKTAEKIMRK 212

Query: 384 TPCIGLKPN----------------GFVTEASRETGMVIINSLALVETLMDPNRWAEMFP 427
           T    L PN                   TEASR T  + ++ + +VE LMD N+++ +F 
Sbjct: 213 TEETLLSPNLGSPRHISALPEESRITLYTEASRHTQFLPVDPVHIVELLMDMNQYSTVFS 272

Query: 428 CMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVV 487
            +++R      +S+   G  +GALQ+M  E    SPL+P RE +  R  KQ A G+W VV
Sbjct: 273 SIVSRATILGNLSTDTPGNYDGALQVMAVEFNAPSPLLPTRECHLARHSKQLATGIWGVV 332

Query: 488 DVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLII 547
           DVS++++         +  RR  SGC+ Q +PNG +K+ WVEH+E D+S V ++++ L+ 
Sbjct: 333 DVSLESLFPN----PLIRYRRRSSGCLAQQLPNGVTKIIWVEHSEADDSSVPEMFQALVT 388

Query: 548 SGMGFGAQRWVATLQRQCECLAILMSTS 575
           SG  +GA+ W+  L RQCE L  +M+ S
Sbjct: 389 SGHAYGAKHWLGNLVRQCERLGHIMARS 416


>gi|60099377|dbj|BAD89978.1| mutant protein of GL2 [Arabidopsis thaliana]
          Length = 339

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/269 (39%), Positives = 149/269 (55%), Gaps = 64/269 (23%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           GA+G+      N  ++K+YHRHT  QI+ +E+LFKE PHPDEKQR +LSK+L L  RQVK
Sbjct: 88  GAAGN---KGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVK 144

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR--NPICTNCGGPAIIGDIS 237
           FWFQNRRTQ+K   ERHENSLL+ E +KLR EN ++R++    N  C NCGG        
Sbjct: 145 FWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRESFSKANSSCPNCGGGP------ 198

Query: 238 LEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNS---SLELGVGTINGFGG 294
                L +EN++LK ELD++ A  G+          P P+  S     E  +G++     
Sbjct: 199 ---DDLHLENSKLKAELDKLRAALGR---------TPYPLQASCSDDQEHRLGSL----- 241

Query: 295 LSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKM 354
                      DF TG+                      ++E+S   E++  A  EL KM
Sbjct: 242 -----------DFYTGVF---------------------ALEKSRIAEISNRATLELQKM 269

Query: 355 AQTDEPLWIRSFEGSGRQVLNHEEYLRTF 383
           A + EP+W+RS E +GR++LN++EYL+ F
Sbjct: 270 ATSGEPMWLRSVE-TGREILNYDEYLKEF 297


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 125/194 (64%), Gaps = 7/194 (3%)

Query: 107 LEHESRSGSDNMDGASGDDLDAADNPP-----RKKRYHR-HTPQQIQELESLFKECPHPD 160
           +E+ES     + D  S   L      P     +KKRY R HTP Q++ LE +FKECP P+
Sbjct: 1   MEYESGGSGGSFDSQSKKKLHRRPRTPDEIQSKKKRYRRPHTPNQLERLEEVFKECPKPN 60

Query: 161 EKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMR 220
           EKQ+L+LSK L L   Q++FWFQN+RTQ K +LER++N LLR ENDK+R EN+S+++A+ 
Sbjct: 61  EKQKLQLSKELALSYGQIRFWFQNKRTQTKAKLERNDNRLLRAENDKIRCENISMKEALE 120

Query: 221 NPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGP-PPMPN 279
           N IC++ G P I GD   + + LR EN  LKDEL +  ++  ++ GR VS   P PP+  
Sbjct: 121 NSICSSGGCPPINGDCYFDRKRLRFENILLKDELYKESSIISEYTGRSVSWFPPVPPIHI 180

Query: 280 SSLELGVGTINGFG 293
           SSL+  +G+ +G G
Sbjct: 181 SSLDSTMGSFSGQG 194


>gi|297608080|ref|NP_001061150.2| Os08g0187500 [Oryza sativa Japonica Group]
 gi|255678202|dbj|BAF23064.2| Os08g0187500 [Oryza sativa Japonica Group]
          Length = 326

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 97/126 (76%), Gaps = 5/126 (3%)

Query: 108 EHESRSGSDNMDGA----SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E ES+S S+N+DGA    SGDD D  +  PRKKRYHRHT  QIQE+E+ FKECPHPD+KQ
Sbjct: 77  EFESKSCSENVDGAGDGLSGDDQDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQ 135

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           R ELS+ L LE  QVKFWFQN+RTQMK Q ERHEN+ LR ENDKLRAENM  ++A+ +  
Sbjct: 136 RKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQLRAENDKLRAENMRYKEALSSAS 195

Query: 224 CTNCGG 229
           C NCGG
Sbjct: 196 CPNCGG 201


>gi|26450799|dbj|BAC42508.1| unknown protein [Arabidopsis thaliana]
          Length = 517

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 134/237 (56%), Gaps = 7/237 (2%)

Query: 336 ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFV 395
           + S+  E+A +A++EL ++   +E  W++S       V++ E Y R              
Sbjct: 25  DMSLLSEIAASAVEELKRLFLAEEQFWVKSCIDE-TYVIDTESYERFSHAVKHFSSTTAH 83

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRN-GALQLM 454
            E+S+   +V + ++ L++  +DP +W E+FP ++ +  T  V+ SG+    N   LQ+M
Sbjct: 84  VESSKAVTVVHVEAINLIQMFLDPEKWKELFPTIVNKANTIHVLGSGLPIRGNCNVLQVM 143

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCV 514
             +L +LSPLVP RE   +R C++  +G+W + DVS     +   A     C + PSGC+
Sbjct: 144 WEQLHILSPLVPAREFMVVRCCQEIEKGIWIIADVSHRANFDFGNAA----CYKRPSGCL 199

Query: 515 VQDMPNGYSKVTWVEHAEYDES-QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAI 570
           +Q +P+ +SKV W+EH E D     H++Y+ L+  G G+GA+RW+ TL+R CE +A+
Sbjct: 200 IQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMAL 256


>gi|356542201|ref|XP_003539558.1| PREDICTED: uncharacterized protein LOC100788105 [Glycine max]
          Length = 1096

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 144/293 (49%), Gaps = 53/293 (18%)

Query: 337 RSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF------------- 383
           ++  +E A  AMDELVK+     PLW +        +LN  EYLR F             
Sbjct: 85  KTEIIEHARLAMDELVKLGTAGHPLW-QPQPKDRFDILNQIEYLRQFGEVDTALREIVKL 143

Query: 384 ------------------------TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDP 419
                                   TP + L+     TEASR+   + ++ +++VE LMD 
Sbjct: 144 IEVGEPQNLPSFDTYQTEQPASKETPTVALQ-----TEASRDMAFINMSPISIVELLMDV 198

Query: 420 NRWAEMFPCMIARTATTDVISSGMGGTR--NGALQLMHAELQVLSPLVPVREVNFLRFCK 477
           N W+  F  ++++     ++ + +GG R  +  L +M AE+ + +  VP RE  F RF K
Sbjct: 199 NEWSSAFYNIVSKAT---LVGTLLGGERGYDDKLHVMSAEIHLPTTTVPTRECYFGRFSK 255

Query: 478 QHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ 537
           Q +  VW VVD+S++    +  +    N  + PSGC++  MPNG+SKV WVEH E D S 
Sbjct: 256 QLSHNVWGVVDISLEKFIPSPTS----NFLKRPSGCLISGMPNGHSKVAWVEHVEADHSH 311

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGIYDINTL 590
           +   +KPL+ S + FGA RW+ +L R  E L  L +T+  A D  G Y   TL
Sbjct: 312 LDNYFKPLVTSTLAFGASRWLNSLNRYGEWLQTLKATTFVA-DEGGTYVFCTL 363


>gi|357452777|ref|XP_003596665.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485713|gb|AES66916.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 554

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 137/274 (50%), Gaps = 41/274 (14%)

Query: 340 FLELALAAMDELVKMAQTDE-PLWIRSFEGSGRQVLNHEEYLRTFT-------------- 384
            ++ A +AM+EL K+   +  P+W +  E    ++L++ EYL+ F+              
Sbjct: 21  IIDCARSAMNELCKIGLAENNPVWHQHKEHR-YEILDNIEYLKQFSQVDASLMELVKMVE 79

Query: 385 -----------PCIGLKP--------NGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
                       C    P         G   E SR+  ++ I+   LVE LMD N+W   
Sbjct: 80  VGDLQTLPSFDSCRIQDPMSTKDVFGQGLQIEGSRDMALIKISPTKLVEVLMDLNQWCTA 139

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
           F  +++R       + G+ G+ N  + +M AE  + SP +P RE  F R+ KQ    +WA
Sbjct: 140 FHNIVSRAEIIGFFTDGVDGSYNEKMHVMSAEFYLPSPFIPTRECVFARYSKQFTHNIWA 199

Query: 486 VVDVSIDTIRETSGAPAFV-NCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKP 544
           VVDVS++ I      P+F  N  + PSGC++  MPNG SKV WVEH   D SQ++ L+K 
Sbjct: 200 VVDVSLEDI-----LPSFSNNFHKRPSGCLIIGMPNGNSKVIWVEHVVADHSQLNGLFKT 254

Query: 545 LIISGMGFGAQRWVATLQRQCECLAILMSTSVSA 578
            + SG+ FGA RW+A++ +  E    L +T + A
Sbjct: 255 FVTSGLAFGAPRWLASIVQHIEWSETLNATKLIA 288


>gi|147780460|emb|CAN74911.1| hypothetical protein VITISV_007605 [Vitis vinifera]
          Length = 715

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 136/266 (51%), Gaps = 40/266 (15%)

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF---------------- 383
            L LA+ AM EL KMA   +PLW  S +G   +VL+H EY + F                
Sbjct: 205 ILGLAIEAMKELTKMATEKQPLWQASIDG---KVLSHMEYTKQFGQVDATLEMVIRKIGM 261

Query: 384 -----------------TPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
                             P + +      TEASRET  ++ + + +VE LM+ ++++ +F
Sbjct: 262 QQPVQPPNLSCPTHIPALPNVEIHTQPLQTEASRETRFLLADPVHIVELLMNNDQYSPVF 321

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
             +++++    V+S+   G  NGALQ+M  E    SPLVP RE    R+ +  +  VW V
Sbjct: 322 SNIVSKSKVLGVLSTQAQGDYNGALQVMAVEFHAPSPLVPNRECYLARYSRCLSNNVWGV 381

Query: 487 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           VDVS++++         +  +R PSGC+++       KV WVEH+E D S V ++ +  +
Sbjct: 382 VDVSLESLFPN----PLIRYQRRPSGCLJEQFQXRLCKVIWVEHSEVDNSSVPEVCQHFV 437

Query: 547 ISGMGFGAQRWVATLQRQCECLAILM 572
            SG  +GA++W++TL RQ E L  +M
Sbjct: 438 TSGHAYGAKQWLSTLVRQHERLTYIM 463


>gi|449449707|ref|XP_004142606.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
 gi|449485422|ref|XP_004157163.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Cucumis
           sativus]
          Length = 589

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 107/186 (57%), Gaps = 7/186 (3%)

Query: 396 TEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISS--GMGGTRNGALQL 453
           TE SR+   V +  L +V   MD  +W+ +F  ++AR       SS   +GG  NG L +
Sbjct: 163 TEFSRQIAYVRMEPLRIVGFFMDLEQWSFVFSDIVARATILKSWSSMEPVGGNYNGTLLV 222

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGC 513
           M AE Q+ SP+V  RE  F RFCKQ A   W +VDVS++ +      P  V  RR PSGC
Sbjct: 223 MRAEFQIPSPIVETRESCFGRFCKQLAPYTWGIVDVSLEDLFP---YPLPVGFRRKPSGC 279

Query: 514 VVQDMPNGYSKVTWVEHAEYDES--QVHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           ++Q  PN  SKV WVEH E D+    V Q+Y+  I SG+ FGA+RWV++L R C   A L
Sbjct: 280 LIQASPNDLSKVIWVEHMEVDQQTIMVDQMYEAYINSGLAFGAKRWVSSLVRHCTWEATL 339

Query: 572 MSTSVS 577
           M+ S S
Sbjct: 340 MAKSCS 345


>gi|293332723|ref|NP_001170002.1| uncharacterized protein LOC100383907 [Zea mays]
 gi|224032821|gb|ACN35486.1| unknown [Zea mays]
          Length = 418

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 19/143 (13%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA------------- 500
           M+AELQV SP +  R +NFLR+ K+ AEG WAV+DVS+D I    G+             
Sbjct: 1   MNAELQVHSPRLLNRSINFLRYTKRVAEGRWAVMDVSVDGILGPPGSRVADAAAAAAAAN 60

Query: 501 -----PA-FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGA 554
                PA +  CR LPSGC+V+DM NGY KVTWV HAEYDE+ V  +++PL  SG   GA
Sbjct: 61  GVTLVPAWYTGCRLLPSGCLVEDMRNGYCKVTWVVHAEYDETTVPTMFRPLFRSGKALGA 120

Query: 555 QRWVATLQRQCECLAILMSTSVS 577
            RW+A+LQRQCE LA+L S+ VS
Sbjct: 121 HRWLASLQRQCEFLAVLHSSQVS 143


>gi|357452773|ref|XP_003596663.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355485711|gb|AES66914.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 545

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 42/260 (16%)

Query: 340 FLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTF---------------- 383
            ++ A +AM+EL K+   +  +W +  E    ++L+  EYL+ F                
Sbjct: 18  IIDRARSAMNELCKIGIAENNVWHQHREHR-YEILDDFEYLKQFGCVDATLLEIVKLVEV 76

Query: 384 -----TPCIGLKPN------------GFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
                 P   L  N            G   EASR+  ++ I+   LVE LMD N+W+  F
Sbjct: 77  GELQTLPSFDLCRNQNSMYTMEVFEQGLQIEASRDKALIKISPTKLVELLMDVNQWSTAF 136

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
             +++       I   + G+ +  + +M AE  + SP++P R+  F R+ KQ    +WAV
Sbjct: 137 YNIVSGAR----ILGSIEGSYDEKMHVMSAEFHLPSPVIPTRKCVFARYSKQFTHNIWAV 192

Query: 487 VDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           VDVS++ I ++       N  + PSGC+++ MP+G SKV W+EH E D S++  L++PL+
Sbjct: 193 VDVSLEDILQSPSN----NFHKRPSGCLIEGMPDGNSKVIWLEHVEADYSKLSDLFRPLV 248

Query: 547 ISGMGFGAQRWVATLQRQCE 566
            S + FGA RW+ ++ R  E
Sbjct: 249 TSALAFGATRWLTSIVRYIE 268


>gi|414877305|tpg|DAA54436.1| TPA: hypothetical protein ZEAMMB73_882214 [Zea mays]
          Length = 685

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 124/213 (58%), Gaps = 13/213 (6%)

Query: 276 PMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDR-- 333
           PM +S+L+L V      GG +  +T +   +     S +         + P +T L +  
Sbjct: 422 PMADSTLDLAVDVGARSGGPTDKMTVSTIFE-----SASSTSSRSGTGTTPMLTTLLQMV 476

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGR---QVLNHEEYLRTFTPCIGLK 390
            I++    + AL+AM+ELV+MAQ + PLW+ +    G    + LN++E+L  F+PC+G+K
Sbjct: 477 RIDKFQIAQFALSAMNELVQMAQRNRPLWVSTVPSLGSLIMETLNYKEHLVAFSPCVGVK 536

Query: 391 PNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNG 449
           P GF++E SRE G+V I +S ALV+T MD  RW ++F C +A TA  + I   + G+RNG
Sbjct: 537 PTGFMSEVSRELGIVTIGSSAALVKTFMDQRRWLDIFCCRVATTAAVEKILP-VAGSRNG 595

Query: 450 ALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
           AL LMHAELQV SPLV +    F R  K H E 
Sbjct: 596 ALLLMHAELQVFSPLVKLLTDFFWRELK-HTEA 627


>gi|297803406|ref|XP_002869587.1| hypothetical protein ARALYDRAFT_492107 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315423|gb|EFH45846.1| hypothetical protein ARALYDRAFT_492107 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 530

 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 120/225 (53%), Gaps = 25/225 (11%)

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
           ++E++ +A  + PLW RS +    ++LN  EY   F P        F  EASR + ++ +
Sbjct: 66  VNEIIALATPESPLWSRS-QCENIEMLNLNEYYSQFFPWYAKNVPRFFHEASRASAVIRV 124

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE-LQVLSPLVP 466
           ++  LV  L +P RW  +FP ++   +           + N  ++++  E L +++P++P
Sbjct: 125 DASWLVRKLENPVRWVSIFPSLVGNVSIE---------SSNDDVKMIDMEFLTLITPVIP 175

Query: 467 VREVNFLRFCKQHAEGVWAVVDVSI------DTIRETSGAPAFVNCRRLPSGCVVQDMPN 520
            R++  LR+C +     W + D+S+      D +R     P F+   R PSG ++Q +PN
Sbjct: 176 TRKIKVLRYCHRIGNDTWIIADISMYLSSYSDDLR-----PEFL---RFPSGFIIQHLPN 227

Query: 521 GYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQC 565
           GYSKVT +EH  Y E  +    +P +  G+GFGA++W+  LQR C
Sbjct: 228 GYSKVTILEHWVYKEDAILNRLRPYLSYGIGFGAKKWLVALQRYC 272


>gi|197309412|gb|ACH61057.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
          Length = 118

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RRLPSGC++QDMPNGYSKVTWVEHAEYD+  VH+LY+ L+ SGM FGAQRW+ATLQRQCE
Sbjct: 1   RRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCE 60

Query: 567 CLAILMSTSVSARDHTGI 584
           CLAIL++T+   RD T I
Sbjct: 61  CLAILIATANVPRDRTAI 78


>gi|197309382|gb|ACH61042.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309384|gb|ACH61043.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309386|gb|ACH61044.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309388|gb|ACH61045.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309390|gb|ACH61046.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309392|gb|ACH61047.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309394|gb|ACH61048.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309396|gb|ACH61049.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309400|gb|ACH61051.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309402|gb|ACH61052.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309404|gb|ACH61053.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309406|gb|ACH61054.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309408|gb|ACH61055.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309410|gb|ACH61056.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309414|gb|ACH61058.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309416|gb|ACH61059.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309418|gb|ACH61060.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309420|gb|ACH61061.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309422|gb|ACH61062.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309424|gb|ACH61063.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309426|gb|ACH61064.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
 gi|197309428|gb|ACH61065.1| homeodomain protein (HB2) [Pseudotsuga macrocarpa]
          Length = 118

 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 68/78 (87%)

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCE 566
           RRLPSGC++QDMPNGYSKVTWVEHAEYD+  VH+LY+ L+ SGM FGAQRW+ATLQRQCE
Sbjct: 1   RRLPSGCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCE 60

Query: 567 CLAILMSTSVSARDHTGI 584
           CLAIL++T+   RD T I
Sbjct: 61  CLAILIATANVPRDPTAI 78


>gi|253759534|ref|XP_002488929.1| hypothetical protein SORBIDRAFT_1592s002010 [Sorghum bicolor]
 gi|241947171|gb|EES20316.1| hypothetical protein SORBIDRAFT_1592s002010 [Sorghum bicolor]
          Length = 144

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 12/140 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+AEL V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N  
Sbjct: 1   MNAELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPSGSRTTDAAAVANNT 60

Query: 506 --CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR L SGC+++DM   NGY K+T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ E LA+L S+ V   D+
Sbjct: 121 QRQYEYLAVLHSSQVPRGDN 140


>gi|242070537|ref|XP_002450545.1| hypothetical protein SORBIDRAFT_05g006728 [Sorghum bicolor]
 gi|241936388|gb|EES09533.1| hypothetical protein SORBIDRAFT_05g006728 [Sorghum bicolor]
          Length = 224

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 93/140 (66%), Gaps = 12/140 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+AEL V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N  
Sbjct: 1   MNAELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 506 --CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
              R L SGC+++DM   NGY K+TWV HAEYDE+ V  L++PL+ SG  FGA RW+A+L
Sbjct: 61  TGYRLLLSGCLIEDMGKGNGYCKITWVVHAEYDETMVPSLFRPLLCSGKAFGAHRWLASL 120

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ + LA+L S+ V   D+
Sbjct: 121 QRQYQYLAVLHSSQVPRGDN 140



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 12/80 (15%)

Query: 457 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN----C 506
           EL V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N    C
Sbjct: 145 ELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNTTGC 204

Query: 507 RRLPSGCVVQDM--PNGYSK 524
           R L SGC+++DM   NGY K
Sbjct: 205 RLLLSGCLIEDMGKGNGYCK 224


>gi|242070525|ref|XP_002450539.1| hypothetical protein SORBIDRAFT_05g006700 [Sorghum bicolor]
 gi|241936382|gb|EES09527.1| hypothetical protein SORBIDRAFT_05g006700 [Sorghum bicolor]
          Length = 158

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 12/140 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+A+L V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N  
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 506 --CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR L SGC+++DM   NGY K+T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLVRSGNAFGAQRWLASL 120

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ E LA+L S+ V   D+
Sbjct: 121 QRQYEYLAVLHSSQVPRGDN 140


>gi|242070527|ref|XP_002450540.1| hypothetical protein SORBIDRAFT_05g006710 [Sorghum bicolor]
 gi|242070529|ref|XP_002450541.1| hypothetical protein SORBIDRAFT_05g006720 [Sorghum bicolor]
 gi|241936383|gb|EES09528.1| hypothetical protein SORBIDRAFT_05g006710 [Sorghum bicolor]
 gi|241936384|gb|EES09529.1| hypothetical protein SORBIDRAFT_05g006720 [Sorghum bicolor]
          Length = 158

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 94/140 (67%), Gaps = 12/140 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+A+L V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N  
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 506 --CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR L SGC+++DM   NGY K+T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ E LA+L S+ V   D+
Sbjct: 121 QRQYEYLAVLHSSQVPRGDN 140


>gi|242070523|ref|XP_002450538.1| hypothetical protein SORBIDRAFT_05g006695 [Sorghum bicolor]
 gi|241936381|gb|EES09526.1| hypothetical protein SORBIDRAFT_05g006695 [Sorghum bicolor]
          Length = 144

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 94/140 (67%), Gaps = 12/140 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+A+L V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N  
Sbjct: 1   MNAKLWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNT 60

Query: 506 --CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR L SGC+++DM   NGY K+T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASL 120

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ E LA+L S+ +   D+
Sbjct: 121 QRQYEYLAVLHSSQIPRGDN 140


>gi|242067919|ref|XP_002449236.1| hypothetical protein SORBIDRAFT_05g006665 [Sorghum bicolor]
 gi|241935079|gb|EES08224.1| hypothetical protein SORBIDRAFT_05g006665 [Sorghum bicolor]
          Length = 139

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 93/140 (66%), Gaps = 13/140 (9%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+AEL V SP +  R++NFLR+ K+ AEG WAV+DVS+D I        T+ A    N  
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAVVANNT 60

Query: 506 --CRRLPSGCVVQDM--PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR LPSGC+++DM   NGY K+TWV HAEYDE+ V   ++PL+ SG  FGA RW+A+L
Sbjct: 61  TGCRLLPSGCLIEDMGKGNGYCKITWVVHAEYDETMV-PTFRPLLRSGKAFGAHRWLASL 119

Query: 562 QRQCECLAILMSTSVSARDH 581
           QRQ E LA+L S+ V   D+
Sbjct: 120 QRQYEYLAVLHSSQVPRGDN 139


>gi|317468128|gb|ADV30317.1| GLABRA2 [Mimulus guttatus]
          Length = 298

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 3/129 (2%)

Query: 456 AELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVV 515
           AE+Q+L+P+V  RE+ F R CK+     WA+VDVSID   E +   +   CR+ PSGC++
Sbjct: 2   AEIQMLTPMVATREMYFFRHCKKLNTNQWAIVDVSID---EDNIDASSQKCRKRPSGCII 58

Query: 516 QDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS 575
           +D  NG+ KVTW+EH E  +  +H LY+ ++ +G+ FGA+ W+ TLQ+QCE L   ++T+
Sbjct: 59  EDKSNGHCKVTWMEHIECQKIPIHSLYRSIVNTGLAFGARHWICTLQQQCERLVFHVATN 118

Query: 576 VSARDHTGI 584
           V  +D +G+
Sbjct: 119 VPVKDSSGV 127


>gi|242070533|ref|XP_002450543.1| hypothetical protein SORBIDRAFT_05g006724 [Sorghum bicolor]
 gi|241936386|gb|EES09531.1| hypothetical protein SORBIDRAFT_05g006724 [Sorghum bicolor]
          Length = 282

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/139 (51%), Positives = 92/139 (66%), Gaps = 12/139 (8%)

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN--- 505
           + EL V SP +  R++NFLR+ K+ AEG WAVVDVS+D I        T+ A A  N   
Sbjct: 60  NTELWVQSPRLLNRKINFLRYNKRVAEGQWAVVDVSVDGILGPPAGSRTTDAAAVANNTT 119

Query: 506 -CRRLPSGCVVQDMP--NGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            CR L SGC+++DM   NGY K+T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+LQ
Sbjct: 120 GCRLLLSGCLIEDMGKGNGYCKITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASLQ 179

Query: 563 RQCECLAILMSTSVSARDH 581
           RQ E LA+L S+ V   D+
Sbjct: 180 RQYEYLAVLHSSQVPRGDN 198



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
           +T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+LQRQ E LA+L S+ V+  D+
Sbjct: 1   ITRVVHAEYDETMVPTLFRPLLRSGNAFGAQRWLASLQRQYEYLAVLHSSQVARGDN 57



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 12/82 (14%)

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN--- 505
           + EL V SP +  R++NFLR+ K+ AEG WAV+DVS+D I        T  A A  N   
Sbjct: 201 NTELWVQSPRLLNRKINFLRYNKRVAEGQWAVMDVSVDGILGLLAGSRTIDAAAVANNTT 260

Query: 506 -CRRLPSGCVVQDM--PNGYSK 524
            CR L SGC+++DM   NGY K
Sbjct: 261 GCRLLLSGCLIEDMGKGNGYCK 282


>gi|125549829|gb|EAY95651.1| hypothetical protein OsI_17516 [Oryza sativa Indica Group]
          Length = 162

 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 3/104 (2%)

Query: 91  GESFEGIIGRRSREDL--LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
            ES + +I  R+ + L   E ES+SGS+N+DG S DD D  +  PRKKRYHRHT  QIQE
Sbjct: 57  AESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDP-NQRPRKKRYHRHTQHQIQE 115

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           +E+ FKECPHPD+KQR ELS+ L LE  QVKFWFQN+RTQMK +
Sbjct: 116 MEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKVK 159


>gi|197309398|gb|ACH61050.1| homeodomain protein (HB2) [Pseudotsuga menziesii]
          Length = 113

 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 53/73 (72%), Positives = 63/73 (86%)

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAIL 571
           GC++QDMPNGYSKVTWVEHAEYD+  VH+LY+ L+ SGM FGAQRW+ATLQRQCECLAIL
Sbjct: 1   GCLIQDMPNGYSKVTWVEHAEYDDRGVHRLYRSLLNSGMAFGAQRWLATLQRQCECLAIL 60

Query: 572 MSTSVSARDHTGI 584
           ++T+   RD T I
Sbjct: 61  IATANVPRDPTAI 73


>gi|115440077|ref|NP_001044318.1| Os01g0760800 [Oryza sativa Japonica Group]
 gi|31339111|dbj|BAC77162.1| GL2-type homeodomain protein [Oryza sativa Japonica Group]
 gi|113533849|dbj|BAF06232.1| Os01g0760800, partial [Oryza sativa Japonica Group]
          Length = 134

 Score =  121 bits (304), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 66/128 (51%), Positives = 87/128 (67%), Gaps = 11/128 (8%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           +K YHRHT +QI+ +E+LFKE PHPDE+QR ++SK+L L  RQVKFWFQNRRTQ+K   E
Sbjct: 1   RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIK---E 57

Query: 195 RHENSLLRQENDKLRAENMSIRDAMRNPI-CTNCG-------GPAIIGDISLEEQHLRIE 246
           RHENSLL+ E +KL+ E+ ++R+  + P  C NCG         A        EQ LR+E
Sbjct: 58  RHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRLE 117

Query: 247 NARLKDEL 254
            A+LK E+
Sbjct: 118 KAKLKAEV 125


>gi|357129501|ref|XP_003566400.1| PREDICTED: homeobox-leucine zipper protein ROC6-like [Brachypodium
           distachyon]
          Length = 403

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/143 (44%), Positives = 89/143 (62%), Gaps = 13/143 (9%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID-----------TIRETSGA-- 500
           M AEL+VL+P  PV  V F+R C +    +WAVVDVS+D            + +T+ A  
Sbjct: 1   MSAELKVLAPRAPVVRVRFMRQCMRLQPRLWAVVDVSVDGFIGHNDEKTLDLYQTAAALP 60

Query: 501 PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVAT 560
             +   R LPSGC++++M +G+ KVT + HAEYDES +  L+ PL+ SG  FGA+RW+A+
Sbjct: 61  TMYTAYRLLPSGCIIEEMDDGHCKVTCIVHAEYDESNIQPLFHPLLRSGQAFGARRWLAS 120

Query: 561 LQRQCECLAILMSTSVSARDHTG 583
           LQRQ E  A+L S  V   ++TG
Sbjct: 121 LQRQSEYFAVLRSDLVLNLNNTG 143


>gi|334187482|ref|NP_001190248.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
 gi|332003747|gb|AED91130.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 536

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 82/367 (22%)

Query: 200 LLRQENDKLRAENMSIRDAMRNP-ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVC 258
            L Q+ND LRAEN +   AM +P IC +C  P I    S EE+ L +ENARL+ E+D   
Sbjct: 10  FLHQQNDLLRAENRARIHAMTSPSICRSCEEPII----STEERELWLENARLRSEID--- 62

Query: 259 ALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVV 318
                                 +L   +  +N F  L     T+L  + G G++     V
Sbjct: 63  ----------------------TLTCFIWRLNSFRNLYPAFATSL-TEVGYGVA-----V 94

Query: 319 MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEE 378
           M         T L               ++ E+V +A+   P+W      +GR  LN +E
Sbjct: 95  M---------TSL---------------SLKEVVFLARQRTPMW----TSNGR--LNLDE 124

Query: 379 YLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDV 438
           Y     P       GFV E SR +  V  ++ +LV  LM+   W ++FP +IA  +    
Sbjct: 125 YYSKLFPWYARNAPGFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIADVS---- 180

Query: 439 ISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS 498
           + S   G +   +  M      +SPL+  R V  LR  +   +  WA+ ++S+       
Sbjct: 181 VESQQRGLQKINVNFMPQ----ISPLIQTRNVKLLRRSRHIEDDTWAIAEISMYFSSYAQ 236

Query: 499 GA-PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 557
              P ++   R PSG ++Q + NG SKVT ++H  Y E +    +     S   FGAQRW
Sbjct: 237 HLRPEYM---RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTFN----SNSEFGAQRW 289

Query: 558 VATLQRQ 564
           +  LQ+ 
Sbjct: 290 LTALQKH 296


>gi|42567715|ref|NP_196343.2| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
 gi|28393170|gb|AAO42017.1| unknown protein [Arabidopsis thaliana]
 gi|28827640|gb|AAO50664.1| unknown protein [Arabidopsis thaliana]
 gi|332003746|gb|AED91129.1| START lipid-binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 541

 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 82/367 (22%)

Query: 200 LLRQENDKLRAENMSIRDAMRNP-ICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVC 258
            L Q+ND LRAEN +   AM +P IC +C  P I    S EE+ L +ENARL+ E+D   
Sbjct: 10  FLHQQNDLLRAENRARIHAMTSPSICRSCEEPII----STEERELWLENARLRSEID--- 62

Query: 259 ALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVV 318
                                 +L   +  +N F  L     T+L  + G G++     V
Sbjct: 63  ----------------------TLTCFIWRLNSFRNLYPAFATSL-TEVGYGVA-----V 94

Query: 319 MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEE 378
           M         T L               ++ E+V +A+   P+W      +GR  LN +E
Sbjct: 95  M---------TSL---------------SLKEVVFLARQRTPMW----TSNGR--LNLDE 124

Query: 379 YLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDV 438
           Y     P       GFV E SR +  V  ++ +LV  LM+   W ++FP +IA  +    
Sbjct: 125 YYSKLFPWYARNAPGFVHEVSRASAFVPCDASSLVANLMNHVSWQKIFPSIIADVS---- 180

Query: 439 ISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETS 498
           + S   G +   +  M      +SPL+  R V  LR  +   +  WA+ ++S+       
Sbjct: 181 VESQQRGLQKINVNFMPQ----ISPLIQTRNVKLLRRSRHIEDDTWAIAEISMYFSSYAQ 236

Query: 499 GA-PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 557
              P ++   R PSG ++Q + NG SKVT ++H  Y E +    +     S   FGAQRW
Sbjct: 237 HLRPEYM---RFPSGYLIQHIANGISKVTILDHWVYKEEEGMNTFN----SNSEFGAQRW 289

Query: 558 VATLQRQ 564
           +  LQ+ 
Sbjct: 290 LTALQKH 296


>gi|37790339|gb|AAR03321.1| homeodomain protein AHDP [Arabidopsis arenosa]
 gi|37790349|gb|AAR03326.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790351|gb|AAR03327.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790353|gb|AAR03328.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790355|gb|AAR03329.1| homeodomain protein AHDP [Arabidopsis suecica]
          Length = 95

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 73/99 (73%), Gaps = 7/99 (7%)

Query: 320 PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEY 379
           PP +   G+ G+D   ++S+ LELAL AMDELVK+A ++EPLW++S +G  R  LN +EY
Sbjct: 3   PPQQQPTGIDGID---QKSVLLELALTAMDELVKLAHSEEPLWVKSLDGE-RDELNQDEY 58

Query: 380 LRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           +RTF+     KP G  TEASR +GMVIINSLALVETLMD
Sbjct: 59  MRTFSST---KPTGLATEASRTSGMVIINSLALVETLMD 94


>gi|37790341|gb|AAR03322.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790343|gb|AAR03323.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790345|gb|AAR03324.1| homeodomain protein AHDP [Arabidopsis suecica]
 gi|37790347|gb|AAR03325.1| homeodomain protein AHDP [Arabidopsis suecica]
          Length = 95

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 8/101 (7%)

Query: 319 MPPNRSGPGVT-GLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHE 377
           +PP +    V  G+D   ++S+ LELAL AMDELVK+AQ++EPLW++S +G  R  LN +
Sbjct: 1   LPPQQQQSTVINGID---QKSVLLELALTAMDELVKLAQSEEPLWVKSLDGE-RDELNQD 56

Query: 378 EYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMD 418
           EY+RTF+     KP G  TEASR +GMVIINSLALVETLMD
Sbjct: 57  EYMRTFSST---KPTGLATEASRTSGMVIINSLALVETLMD 94


>gi|334847850|gb|AEH04620.1| homeodomain leucine zipper family IV protein [Zea mays]
          Length = 165

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 84/121 (69%), Gaps = 1/121 (0%)

Query: 334 SIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNG 393
           S ++SM +ELA+AAMDEL++MA+ D PLW     G  +Q L+ EEY RTF   +G +  G
Sbjct: 45  SADKSMIVELAVAAMDELLRMARVDAPLWNGGVAGVPQQ-LDEEEYGRTFPGGLGPRQYG 103

Query: 394 FVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQL 453
              EASR+  +VI+   +LVE LMD NR+A +F  +++R +T +V+S+G+ G+ NGALQ+
Sbjct: 104 LRPEASRDDAVVIMTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQV 163

Query: 454 M 454
           +
Sbjct: 164 L 164


>gi|8778268|gb|AAF79277.1|AC023279_26 F12K21.1 [Arabidopsis thaliana]
          Length = 164

 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERH 196
           R H H+  Q+Q LE+ F ECPHPD+ QR +L   L L+ +Q+KFWFQNRRTQ +   E+ 
Sbjct: 20  RRH-HSNHQVQRLEAFFHECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKA 78

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDR 256
           +N  LR EN K+R  N ++  A+   +C  CGGP    +     Q LR +N  LK E   
Sbjct: 79  DNIALRVENMKIRCVNEAMEKALETVLCPPCGGPHGKEEQLCNLQKLRTKNVILKTE--- 135

Query: 257 VCALAGKF 264
           VC  A  +
Sbjct: 136 VCVYANTY 143


>gi|23495870|dbj|BAC20079.1| homeobox 1-like protein [Oryza sativa Japonica Group]
          Length = 252

 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 1/110 (0%)

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTW 527
           +EVNF+R+C+Q  +G+WA+ D+ ++  R+       +  RRLPSGC++ +M N YS+VT 
Sbjct: 72  QEVNFVRYCRQIEQGLWAITDIFVNLQRDAYFGVPPLRSRRLPSGCLIANMANSYSEVTR 131

Query: 528 VEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           VEH E +E   ++ LY+ L++SG  FGA  W+A LQR C+  A L++  V
Sbjct: 132 VEHMEVEEKNPINVLYRDLVLSGDVFGAHCWLAALQRACDRYASLVALGV 181


>gi|7546704|emb|CAB87282.1| putative protein [Arabidopsis thaliana]
          Length = 526

 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 139/330 (42%), Gaps = 77/330 (23%)

Query: 236 ISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGL 295
           IS EE+ L +ENARL+ E+D                         +L   +  +N F  L
Sbjct: 30  ISTEERELWLENARLRSEID-------------------------TLTCFIWRLNSFRNL 64

Query: 296 SSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMA 355
                T+L  + G G++     VM         T L               ++ E+V +A
Sbjct: 65  YPAFATSL-TEVGYGVA-----VM---------TSL---------------SLKEVVFLA 94

Query: 356 QTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVET 415
           +   P+W      +GR  LN +EY     P       GFV E SR +  V  ++ +LV  
Sbjct: 95  RQRTPMW----TSNGR--LNLDEYYSKLFPWYARNAPGFVHEVSRASAFVPCDASSLVAN 148

Query: 416 LMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRF 475
           LM+   W ++FP +IA  +    + S   G +   +  M      +SPL+  R V  LR 
Sbjct: 149 LMNHVSWQKIFPSIIADVS----VESQQRGLQKINVNFMPQ----ISPLIQTRNVKLLRR 200

Query: 476 CKQHAEGVWAVVDVSIDTIRETSGA-PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYD 534
            +   +  WA+ ++S+          P ++   R PSG ++Q + NG SKVT ++H  Y 
Sbjct: 201 SRHIEDDTWAIAEISMYFSSYAQHLRPEYM---RFPSGYLIQHIANGISKVTILDHWVYK 257

Query: 535 ESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
           E +    +     S   FGAQRW+  LQ+ 
Sbjct: 258 EEEGMNTFN----SNSEFGAQRWLTALQKH 283


>gi|218189190|gb|EEC71617.1| hypothetical protein OsI_04034 [Oryza sativa Indica Group]
          Length = 400

 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 7/103 (6%)

Query: 462 SPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNG 521
           SPLVP R+  FLR+C    EG+  V+DVS+D          F  CR++PSG ++Q +   
Sbjct: 5   SPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD------GSIFSKCRKMPSGFLIQSIRPN 58

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
             KVT +EH   D++ VH+LY+P  ++G+ FGA+RWVAT+ RQ
Sbjct: 59  SCKVTAIEHVLVDDTGVHELYQP-CMNGLVFGARRWVATMARQ 100


>gi|147781895|emb|CAN69944.1| hypothetical protein VITISV_006132 [Vitis vinifera]
          Length = 161

 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/84 (69%), Positives = 65/84 (77%), Gaps = 2/84 (2%)

Query: 95  EGIIGRRSR--EDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESL 152
           EG++GR SR  E   EHE RSG+DNMD  SG+D  AADNPPRKKRYHRH  +QIQE E+L
Sbjct: 78  EGVVGRTSRKLERKDEHEGRSGTDNMDDVSGNDQVAADNPPRKKRYHRHALRQIQEFEAL 137

Query: 153 FKECPHPDEKQRLELSKRLCLETR 176
            +EC HP EKQRL L KRLCLETR
Sbjct: 138 LQECLHPGEKQRLRLRKRLCLETR 161


>gi|242067917|ref|XP_002449235.1| hypothetical protein SORBIDRAFT_05g006660 [Sorghum bicolor]
 gi|241935078|gb|EES08223.1| hypothetical protein SORBIDRAFT_05g006660 [Sorghum bicolor]
          Length = 114

 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 8/96 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI--RETSGAPAFVN----CR 507
           M+AEL V SP +  R++NFLR+ K+ AEG WAV+DVS+D I  R T+ A    N    CR
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGRRTTDAAVVANNTTGCR 60

Query: 508 RLPSGCVVQDM--PNGYSKVTWVEHAEYDESQVHQL 541
            LPS C+++DM   NGY K+TWV HAEYDE+ V  L
Sbjct: 61  LLPSDCLIEDMGKGNGYYKITWVVHAEYDETMVPTL 96


>gi|297789842|ref|XP_002862848.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308596|gb|EFH39106.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 126

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 48/60 (80%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           PP+KKRYHRH+  QIQELES F+ECPHPD+ QR  LS +L L+  QVKFWFQN+RTQ K 
Sbjct: 65  PPKKKRYHRHSQIQIQELESFFRECPHPDDNQRNALSVQLGLDPVQVKFWFQNKRTQSKA 124


>gi|242070539|ref|XP_002450546.1| hypothetical protein SORBIDRAFT_05g006730 [Sorghum bicolor]
 gi|241936389|gb|EES09534.1| hypothetical protein SORBIDRAFT_05g006730 [Sorghum bicolor]
          Length = 114

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 31/133 (23%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+AEL + SP +  R++NFLR+ K+ AEG WAV+DVS+D I        T+ A A  N  
Sbjct: 1   MNAELWLQSPRLLNRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAAIANNT 60

Query: 506 --CRRLPSGCVVQDM--PNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATL 561
             CR L SGC+++DM   NGY                    KPL+ SG  FGA RW+A+L
Sbjct: 61  TGCRLLLSGCLIEDMGKGNGYC-------------------KPLLRSGKAFGAHRWLASL 101

Query: 562 QRQCECLAILMST 574
           QRQ E LA+  S+
Sbjct: 102 QRQYEYLAVRHSS 114


>gi|253758737|ref|XP_002488889.1| hypothetical protein SORBIDRAFT_2315s002010 [Sorghum bicolor]
 gi|241947279|gb|EES20424.1| hypothetical protein SORBIDRAFT_2315s002010 [Sorghum bicolor]
          Length = 105

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 69/131 (52%), Gaps = 36/131 (27%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI------RETSGAPAFVN-- 505
           M+AEL V SP +  R++NFLR+ K+ AEG WAV+DVS+D I        T+ A    N  
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGPPAGSRTTDAAVVANNT 60

Query: 506 --CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
             CR LPSGC+++DM  G                          +G  FG  RW+ATLQR
Sbjct: 61  TGCRLLPSGCLIEDMGKG--------------------------NGYSFGVHRWLATLQR 94

Query: 564 QCECLAILMST 574
           Q E LA+L S+
Sbjct: 95  QYEYLAVLHSS 105


>gi|356515619|ref|XP_003526496.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 845

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 177/441 (40%), Gaps = 102/441 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 77

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E S L+  N KL A N   M   D ++  +                  HL  EN+
Sbjct: 78  --QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-----------------SHLVYENS 118

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVT-TTLPADF 307
             + +                                  T N    L++T T T+  +  
Sbjct: 119 FFRQQ----------------------------------THNNNATLATTDTNTSCESVV 144

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRS 365
            +G  N  P   PP  + P   GL    E ++  FL  A     E V+M     P     
Sbjct: 145 TSGQRNLTPQQHPPRDASPA--GLLSIAEETLAEFLSKATGTAVEWVQM-----PGMKPG 197

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C G+        A+R  G+V +    + E L D   W   
Sbjct: 198 PDSIGIVAISHG--------CPGV--------AARACGLVGLEPTRVAEILKDRLSWFR- 240

Query: 426 FPCMIARTA-TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVW 484
                 RT    +V+S+G GGT    ++L++ +L   + L P R+   LR+     +G +
Sbjct: 241 ----DCRTVDVLNVMSTGNGGT----IELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSF 292

Query: 485 AVVDVSIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQL 541
            V + S++  +     P    FV    LPSG +++    G S +  V+H   +   V ++
Sbjct: 293 VVCERSLNNTQNGPAMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEV 352

Query: 542 YKPLIISGMGFGAQRWVATLQ 562
            +PL  S M    +  +A L+
Sbjct: 353 LRPLYESSMLLAQRTTMAALR 373


>gi|125558122|gb|EAZ03658.1| hypothetical protein OsI_25793 [Oryza sativa Indica Group]
          Length = 183

 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 13/137 (9%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DD     +    KR  RHT  QI+ LES+F+ C +    QR+EL+K+L +E RQ+     
Sbjct: 41  DDSSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQRVELAKKLGMEERQM----- 95

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHL 243
                     ER E   L++END L AEN  +++AM   IC  CG P +    +++ ++L
Sbjct: 96  --------HDERQEGMWLQEENDVLHAENKVLKEAMWANICFTCGSPVVPAIPTVQHRYL 147

Query: 244 RIENARLKDELDRVCAL 260
             +N RL DEL    A+
Sbjct: 148 SFQNMRLADELQHATAV 164


>gi|222640034|gb|EEE68166.1| hypothetical protein OsJ_26284 [Oryza sativa Japonica Group]
          Length = 133

 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 11/87 (12%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           E ES+S S+N+DGA GD     D  P ++      P++    E+ FKECPHPD+KQR EL
Sbjct: 46  EFESKSCSENVDGA-GDGFSGDDQGPNQR------PRK----EAFFKECPHPDDKQRKEL 94

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLE 194
           S+ L LE  QVKFWFQN+RTQMK  ++
Sbjct: 95  SRELGLEPLQVKFWFQNKRTQMKASIK 121


>gi|356522964|ref|XP_003530112.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 841

 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 103/436 (23%), Positives = 172/436 (39%), Gaps = 94/436 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
             +R E+S L+  N KL A N  + +                            EN RL+
Sbjct: 75  --QRKESSRLQAVNRKLTAMNKLLME----------------------------ENDRLQ 104

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G F      +    P  ++S E             S VT        +G 
Sbjct: 105 KQVSQLVYENGYFRQHTTQNTKQQPTKDTSCE-------------SAVT--------SGQ 143

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGS 369
            + L    PP  + P   GL    E ++  FL  A     E V+M     P      +  
Sbjct: 144 QHNLTTQHPPRDASPA--GLLSIAEETLAEFLSKATGTAVEWVQM-----PGMKPGPDSI 196

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           G   ++H         C G+        A+R  G+V +    + E L D   W +   C 
Sbjct: 197 GIVAISHS--------CTGV--------AARACGLVGLEPTRVAEILKDRPLWFQ--DCR 238

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
                  +V+ +  GGT    ++L++ +L   + L P R+   LR+     +G   + + 
Sbjct: 239 AVD--VLNVLPTANGGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICER 292

Query: 490 SIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           S+   +     P    FV    LPSG +++    G S +  V+H   +   V ++ +PL 
Sbjct: 293 SLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLY 352

Query: 547 ISGMGFGAQRWVATLQ 562
            S      +  +  L+
Sbjct: 353 ESSTVLAQKTSIVALR 368


>gi|7209912|dbj|BAA92366.1| homeobox protein PpHB10 [Physcomitrella patens]
          Length = 880

 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 58/439 (13%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 72

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR--IENARL 250
            +R E + L   N KL A N  + +        N         ++LE   LR  I N   
Sbjct: 73  -QRKEATRLVSVNAKLTALNKLLME-------ENERLAKHTSQLTLENHALRQQIPNLPF 124

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPN-SSLELGVGT-INGFGGLSSTVTTTLPADFG 308
            D   R   L  + L  P+   G     + SS + G+   ++G  G++ST T+   A  G
Sbjct: 125 PDGRHR---LPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTG 181

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSF 366
            G+ + L     P  S P   GL  + E ++  FL  A     + +++     P      
Sbjct: 182 -GLPHRLTPQHSPRDSSPA--GLLATAEETLTEFLAKATGTAVDWIQL-----PGMKPGP 233

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           +  G   ++H         C+G+        A+R  G+V ++   + E L D  RW +  
Sbjct: 234 DAIGIIAISHG--------CVGI--------AARACGLVALDISKVTEVLKDRPRWLQ-- 275

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
            C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G   +
Sbjct: 276 DCR--RMEILGALPTGNGGT----IELLYTQMYAPTTLAPARDYCTLRYTTILEDGNVVI 329

Query: 487 VDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYK 543
            + S+  ++     P   +FV     PSG +++    G   +  V+H   +   V ++ +
Sbjct: 330 CERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEPRSVPEVLR 389

Query: 544 PLIISGMGFGAQRWVATLQ 562
           PL  S      +  +A L+
Sbjct: 390 PLYESPAVLSQKSTLAALR 408


>gi|168024520|ref|XP_001764784.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|90110442|gb|ABD90523.1| class III homeodomain-leucine zipper [Physcomitrella patens]
 gi|162684078|gb|EDQ70483.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 183/443 (41%), Gaps = 66/443 (14%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 6   KYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR--IENARL 250
            +R E + L   N KL A N  + +        N         ++LE   LR  I N   
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLME-------ENERLAKHTSQLTLENHALRQQIPNLPF 115

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPN-SSLELGVGT-INGFGGLSSTVTTTLPADFG 308
            D   R   L  + L  P+   G     + SS + G+   ++G  G++ST T+       
Sbjct: 116 PDGRHR---LPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSC-----D 167

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR---- 364
           + ++  LP  + P  S        R    +  L  A   + E +  A      WI+    
Sbjct: 168 SAVTGGLPHRLTPQHS-------PRDSSPAGLLATAEETLTEFLAKATGTAVDWIQLPGM 220

Query: 365 --SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
               +  G   ++H         C+G+        A+R  G+V ++   + E L D  RW
Sbjct: 221 KPGPDAIGIIAISHG--------CVGI--------AARACGLVALDISKVTEVLKDRPRW 264

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
            +   C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G
Sbjct: 265 LQ--DCR--RMEILGALPTGNGGT----IELLYTQMYAPTTLAPARDYCTLRYTTILEDG 316

Query: 483 VWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH 539
              + + S+  ++     P   +FV     PSG +++    G   +  V+H   +   V 
Sbjct: 317 NVVICERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEPWSVP 376

Query: 540 QLYKPLIISGMGFGAQRWVATLQ 562
           ++ +PL  S      +  +A L+
Sbjct: 377 EVLRPLYESPAVLSQKSTLAALR 399


>gi|356507931|ref|XP_003522716.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine
           max]
          Length = 844

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 172/440 (39%), Gaps = 101/440 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 77

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E S L+  N KL A N   M   D ++  +                  HL  EN+
Sbjct: 78  --QRKEASRLQAVNRKLTAMNKLLMEENDRLQKQV-----------------SHLVYENS 118

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
             + +      LA                                  ++   T+  +   
Sbjct: 119 FFRQQTHNNATLA----------------------------------TTDTNTSCESVVT 144

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSF 366
           +G  N  P   PP  + P   GL    E ++  FL  A     E V+M     P      
Sbjct: 145 SGQRNLTPQQHPPRDASPA--GLLSIAEETLAEFLSKATGTAVEWVQM-----PGMKPGP 197

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           +  G   ++H         C G+        A+R  G+V +    + E L D   W    
Sbjct: 198 DSIGIVAISHG--------CPGV--------AARACGLVGLEPARVAEILKDRLSWFR-- 239

Query: 427 PCMIARTA-TTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
                RT    +V+S+G GGT    ++L++ +L   + L P R+   LR+     +G   
Sbjct: 240 ---DCRTVDVLNVMSTGNGGT----IELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLV 292

Query: 486 VVDVSIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           V + S++  +     P    FV    L SG +++    G S +  V+H   +   V ++ 
Sbjct: 293 VCERSLNNTQNGPAMPPVQHFVRADMLASGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVL 352

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S M    +  +A L+
Sbjct: 353 RPLYESSMLLAQRTTMAALR 372


>gi|89514849|gb|ABD75299.1| class III homeodomain-leucine zipper protein HB10 [Physcomitrella
           patens]
 gi|110349520|gb|ABG73235.1| class III HD-Zip protein HB10 [Physcomitrella patens]
          Length = 880

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 187/439 (42%), Gaps = 58/439 (13%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTQEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 72

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR--IENARL 250
            +R E + L   N KL A N  + +        N         ++LE   LR  I N   
Sbjct: 73  -QRKEATRLVSVNAKLTALNKLLME-------ENERLAKHTSQLTLENHALRQQIPNLPF 124

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPN-SSLELGVGT-INGFGGLSSTVTTTLPADFG 308
            D   R   L  + L  P+   G     + SS + G+   ++G  G++ST T+   A  G
Sbjct: 125 PDGRHR---LPSQILQSPLKKEGAVNGGDESSTQGGICVKVHGQAGIASTDTSCDSAVTG 181

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSF 366
            G+ + L     P  S P   GL  + E ++  FL  A     + +++     P      
Sbjct: 182 -GLPHRLTPQHSPRDSSPA--GLLATAEETLTEFLAKATGTAVDWIQL-----PGMKPGP 233

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           +  G   ++H         C+G+        A+R  G+V ++   + E L D  RW +  
Sbjct: 234 DAIGIIAISHG--------CVGI--------AARACGLVALDISKVTEVLKDRPRWLQ-- 275

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
            C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G   +
Sbjct: 276 DCR--RMEILGALPTGNGGT----IELLYTQMYAPTTLAPARDYCTLRYTTILEDGNVVI 329

Query: 487 VDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYK 543
            + S+  ++     P   +FV     PSG +++    G   +  V+H   +   V ++ +
Sbjct: 330 CERSLSGVQGGPTMPPVQSFVRGEMYPSGYLIRPCDGGGCIIHVVDHYNNEPWSVPEVLR 389

Query: 544 PLIISGMGFGAQRWVATLQ 562
           PL  S      +  +A L+
Sbjct: 390 PLYESPAVLSQKSTLAALR 408


>gi|328688805|gb|AEB36014.1| ATML1 [Helianthus tuberosus]
 gi|328688807|gb|AEB36015.1| ATML1 [Helianthus tuberosus]
 gi|328688809|gb|AEB36016.1| ATML1 [Helianthus tuberosus]
 gi|328688811|gb|AEB36017.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 45/58 (77%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ A D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPAGD 58


>gi|90110438|gb|ABD90521.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 737

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/440 (21%), Positives = 175/440 (39%), Gaps = 91/440 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKE-CPILANIEPKQIKVWFQNRRCREK- 63

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
             +R E + L   N KL A N  + +                  ++     L ++N  L+
Sbjct: 64  --QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLDNHALR 107

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            +L                       PN  +  G   ++G  G++ST T+       + +
Sbjct: 108 QQL-----------------------PNLPVPDGKCRLSGQAGVASTDTSC-----DSAV 139

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
           +  LP  +    S P  +        +  L +A   + + +  A      WI+       
Sbjct: 140 TGGLPQHLTSQHSSPDAS-------PAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPG 192

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C+G+        A+R  G+  ++   + E L D   W++ 
Sbjct: 193 PDAIGIIAISHG--------CVGI--------AARACGLAALDFSKVAEILKDRPGWSQ- 235

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
             C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G   
Sbjct: 236 -DCR--RMEVLGTLPTGNGGT----IELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLV 288

Query: 486 VVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           + + S+         P   +F+     PSG +++    G   +  V+H EY+   V ++ 
Sbjct: 289 ICERSLTGKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVL 348

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +A L+
Sbjct: 349 RPLYESPAVLAHKSTIAALR 368


>gi|89953822|gb|ABD75297.1| class III homeodomain-leucine zipper protein C3HDZ1 [Physcomitrella
           patens]
          Length = 833

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/440 (21%), Positives = 176/440 (40%), Gaps = 91/440 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKE-CPILANIEPKQIKVWFQNRRCREK- 63

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
             +R E + L   N KL A N  + +                  ++     L ++N  L+
Sbjct: 64  --QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLDNHALR 107

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            +L  +                  P+P+    L     +G  G++ST T+       + +
Sbjct: 108 QQLPNL------------------PVPDGKCRL-----SGQAGVASTDTSC-----DSAV 139

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
           +  LP  +    S P  +        +  L +A   + + +  A      WI+       
Sbjct: 140 TGGLPQHLTSQHSSPDAS-------PAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPG 192

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C+G+        A+R  G+  ++   + E L D   W++ 
Sbjct: 193 PDAIGIIAISHG--------CVGI--------AARACGLAALDFSKVAEILKDRPGWSQ- 235

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
             C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G   
Sbjct: 236 -DCR--RMEVLGTLPTGNGGT----IELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLV 288

Query: 486 VVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           + + S+         P   +F+     PSG +++    G   +  V+H EY+   V ++ 
Sbjct: 289 ICERSLTGKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVL 348

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +A L+
Sbjct: 349 RPLYESPAVLAHKSTIAALR 368


>gi|110349524|gb|ABG73237.1| class III HD-Zip protein HB12 [Physcomitrella patens]
          Length = 844

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/440 (21%), Positives = 175/440 (39%), Gaps = 91/440 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKE-CPILANIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
             +R E + L   N KL A N  + +                  ++     L ++N  L+
Sbjct: 75  --QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLDNHALR 118

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            +L                       PN  +  G   ++G  G++ST T+       + +
Sbjct: 119 QQL-----------------------PNLPVPDGKCRLSGQAGVASTDTSC-----DSAV 150

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
           +  LP  +    S P  +        +  L +A   + + +  A      WI+       
Sbjct: 151 TGGLPQHLTSQHSSPDAS-------PAGLLSMAEETLTDFLAKATGTAVDWIQLPGMKPG 203

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C+G+        A+R  G+  ++   + E L D   W++ 
Sbjct: 204 PDAIGIIAISHG--------CVGI--------AARACGLAALDFSKVAEILKDRPGWSQ- 246

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
             C   R      + +G GGT    ++L++ ++   + L P R+   LR+     +G   
Sbjct: 247 -DCR--RMEVLGTLPTGNGGT----IELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLV 299

Query: 486 VVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           + + S+         P   +F+     PSG +++    G   +  V+H EY+   V ++ 
Sbjct: 300 ICERSLTGKHNGPTMPPVQSFIRAEMFPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVL 359

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +A L+
Sbjct: 360 RPLYESPAVLAHKSTIAALR 379


>gi|328688777|gb|AEB36000.1| ATML1 [Helianthus exilis]
 gi|328688819|gb|AEB36021.1| ATML1 [Helianthus argophyllus]
 gi|328688821|gb|AEB36022.1| ATML1 [Helianthus argophyllus]
          Length = 151

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 45/58 (77%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 58


>gi|328688761|gb|AEB35992.1| ATML1 [Helianthus paradoxus]
 gi|328688763|gb|AEB35993.1| ATML1 [Helianthus paradoxus]
          Length = 151

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 45/58 (77%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 58


>gi|328688803|gb|AEB36013.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 45/58 (77%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 58


>gi|328688991|gb|AEB36107.1| ATML1 [Helianthus annuus]
 gi|328688993|gb|AEB36108.1| ATML1 [Helianthus annuus]
 gi|328689055|gb|AEB36139.1| ATML1 [Helianthus annuus]
 gi|328689057|gb|AEB36140.1| ATML1 [Helianthus annuus]
          Length = 151

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/58 (58%), Positives = 45/58 (77%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 58


>gi|147772902|emb|CAN69075.1| hypothetical protein VITISV_007225 [Vitis vinifera]
          Length = 141

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 4/91 (4%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLD--AADNPPRKKRYHRHTPQQIQEL 149
           E+F+  +  R  ED   +ES SGS N+D    D+ +    + P +K +YHRHT +QI EL
Sbjct: 53  ENFDSSVMGRINEDG--YESMSGSGNLDCRLEDEQETLVLERPAKKLKYHRHTQEQINEL 110

Query: 150 ESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           E+ FKE PHPD+KQRL+LS++L LE RQVKF
Sbjct: 111 ETGFKEWPHPDDKQRLDLSRKLNLEPRQVKF 141


>gi|168020051|ref|XP_001762557.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686290|gb|EDQ72680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 873

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 185/445 (41%), Gaps = 67/445 (15%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR--IENARL 250
            +R E S L   N KL A N  + +        N         ++LE   LR  +    L
Sbjct: 64  -QRKEASRLVSVNAKLTALNKLLME-------ENERLAKHTSQLTLENHALRQQLPGLPL 115

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPN-SSLELGVGT-INGFGGLSSTVTTTLPADFG 308
            D   R+ + A   L   +   G     + SS + G+   I+G  G++ST T+       
Sbjct: 116 TDGRHRLSSQATSVLQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSC-----D 170

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR---- 364
           + ++  LP  + P  S        R    +  L +A   + + +  A      WI+    
Sbjct: 171 SAVTGGLPHRLTPQHS-------PRDTSPAGLLAIAEETLTDFLAKATGTAVDWIQLPGM 223

Query: 365 --SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
               +  G   ++H         C+G+        A+R  G+V +++  + E L D   W
Sbjct: 224 KPGPDAIGIIAISHG--------CVGI--------AARACGLVALDASKVTEVLKDRPAW 267

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
            +   C   R     V+ +  GGT    ++L++ ++   + L   R+   LR+     +G
Sbjct: 268 QQ--DCR--RMEVLGVLPTANGGT----IELLYTQMYAPTTLASARDYCTLRYTTILEDG 319

Query: 483 VWAVVDVSIDTIRETSGAP-----AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQ 537
              + + S+  I   +G P     +FV     PSG +++    G   +  V+H + +   
Sbjct: 320 NLVICERSL--IGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGCIIHVVDHYDNERWS 377

Query: 538 VHQLYKPLIISGMGFGAQRWVATLQ 562
           V ++ +PL  S      +  +A L+
Sbjct: 378 VPEVLRPLYESPAVLAQRSTIAALR 402


>gi|328688791|gb|AEB36007.1| ATML1 [Helianthus tuberosus]
 gi|328688797|gb|AEB36010.1| ATML1 [Helianthus tuberosus]
 gi|328688801|gb|AEB36012.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ A D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPAGD 56


>gi|328688813|gb|AEB36018.1| ATML1 [Helianthus tuberosus]
          Length = 151

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 44/58 (75%)

Query: 523 SKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           SKVTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA + + ++ + D
Sbjct: 1   SKVTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVXANNIPSGD 58


>gi|110349522|gb|ABG73236.1| class III HD-Zip protein HB11 [Physcomitrella patens]
          Length = 880

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 184/446 (41%), Gaps = 75/446 (16%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 19  KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 76

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E S L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 77  -QRKEASRLVSVNAKLTALNKLLMEENER--------------LAKHTSQLTLENHALRQ 121

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT-INGFGGLSSTVTTTLPADF 307
           +L  +    G+      +++      N    SS + G+   I+G  G++ST T+      
Sbjct: 122 QLPGLPLTDGRHRLSSQNALKKEGAVNGGDESSTQGGICVRIHGQAGVASTDTSC----- 176

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR--- 364
            + ++  LP  + P  S        R    +  L +A   + + +  A      WI+   
Sbjct: 177 DSAVTGGLPHRLTPQHS-------PRDTSPAGLLAIAEETLTDFLAKATGTAVDWIQLPG 229

Query: 365 ---SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
                +  G   ++H         C+G+        A+R  G+V +++  + E L D   
Sbjct: 230 MKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDASKVTEVLKDRPA 273

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W +   C   R     V+ +  GGT    ++L++ ++   + L   R+   LR+     +
Sbjct: 274 WQQ--DCR--RMEVLGVLPTANGGT----IELLYTQMYAPTTLASARDYCTLRYTTILED 325

Query: 482 GVWAVVDVSIDTIRETSGAP-----AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDES 536
           G   + + S+  I   +G P     +FV     PSG +++    G   +  V+H + +  
Sbjct: 326 GNLVICERSL--IGGQNGPPMPPVQSFVRGEMFPSGYLIRPSDGGGCIIHVVDHYDNERW 383

Query: 537 QVHQLYKPLIISGMGFGAQRWVATLQ 562
            V ++ +PL  S      +  +A L+
Sbjct: 384 SVPEVLRPLYESPAVLAQRSTIAALR 409


>gi|4455215|emb|CAB36538.1| putative homeodomain protein [Arabidopsis thaliana]
          Length = 442

 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 27/186 (14%)

Query: 341 LELALAAM-DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 399
           L + LA + +E++ +A  + PLW RS      ++L   EY   F P        FV EAS
Sbjct: 64  LWVVLACIVNEIIALATLESPLWRRS---QREEMLTLNEYYSRFFPWYAKNVPRFVHEAS 120

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE-L 458
           R + ++ +++  L+  L +P RW  +FP ++   +    I S     R     ++  E L
Sbjct: 121 RASEVIHVDASWLLTKLKNPMRWVTIFPSLVGNVS----IESSNDDVR----MIIDMEFL 172

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI------DTIRETSGAPAFVNCRRLPSG 512
            +++P++P R+V  LR+C + A   W + D+S+      D +R     P F+   R PSG
Sbjct: 173 TLITPVIPTRKVKVLRYCHRIANDTWIIADISMYLSSYSDDLR-----PEFL---RFPSG 224

Query: 513 CVVQDM 518
            +++ +
Sbjct: 225 FIIKHV 230


>gi|15236909|ref|NP_194422.1| StAR-related lipid-transfer protein [Arabidopsis thaliana]
 gi|7269545|emb|CAB79547.1| putative homeodomain protein [Arabidopsis thaliana]
 gi|332659870|gb|AEE85270.1| StAR-related lipid-transfer protein [Arabidopsis thaliana]
          Length = 461

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 27/186 (14%)

Query: 341 LELALAAM-DELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEAS 399
           L + LA + +E++ +A  + PLW RS      ++L   EY   F P        FV EAS
Sbjct: 64  LWVVLACIVNEIIALATLESPLWRRS---QREEMLTLNEYYSRFFPWYAKNVPRFVHEAS 120

Query: 400 RETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE-L 458
           R + ++ +++  L+  L +P RW  +FP ++   +    I S     R     ++  E L
Sbjct: 121 RASEVIHVDASWLLTKLKNPMRWVTIFPSLVGNVS----IESSNDDVR----MIIDMEFL 172

Query: 459 QVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI------DTIRETSGAPAFVNCRRLPSG 512
            +++P++P R+V  LR+C + A   W + D+S+      D +R     P F+   R PSG
Sbjct: 173 TLITPVIPTRKVKVLRYCHRIANDTWIIADISMYLSSYSDDLR-----PEFL---RFPSG 224

Query: 513 CVVQDM 518
            +++ +
Sbjct: 225 FIIKHV 230


>gi|328688789|gb|AEB36006.1| ATML1 [Helianthus exilis]
          Length = 149

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688749|gb|AEB35986.1| ATML1 [Helianthus paradoxus]
 gi|328688751|gb|AEB35987.1| ATML1 [Helianthus paradoxus]
 gi|328688755|gb|AEB35989.1| ATML1 [Helianthus paradoxus]
 gi|328688767|gb|AEB35995.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688735|gb|AEB35979.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688721|gb|AEB35972.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688723|gb|AEB35973.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688745|gb|AEB35984.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688753|gb|AEB35988.1| ATML1 [Helianthus paradoxus]
 gi|328688757|gb|AEB35990.1| ATML1 [Helianthus paradoxus]
 gi|328688759|gb|AEB35991.1| ATML1 [Helianthus paradoxus]
 gi|328688765|gb|AEB35994.1| ATML1 [Helianthus paradoxus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688739|gb|AEB35981.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688725|gb|AEB35974.1| ATML1 [Helianthus petiolaris]
 gi|328688727|gb|AEB35975.1| ATML1 [Helianthus petiolaris]
 gi|328688729|gb|AEB35976.1| ATML1 [Helianthus petiolaris]
 gi|328688733|gb|AEB35978.1| ATML1 [Helianthus petiolaris]
 gi|328688737|gb|AEB35980.1| ATML1 [Helianthus petiolaris]
 gi|328688741|gb|AEB35982.1| ATML1 [Helianthus petiolaris]
 gi|328688743|gb|AEB35983.1| ATML1 [Helianthus petiolaris]
 gi|328688769|gb|AEB35996.1| ATML1 [Helianthus exilis]
 gi|328688771|gb|AEB35997.1| ATML1 [Helianthus exilis]
 gi|328688773|gb|AEB35998.1| ATML1 [Helianthus exilis]
 gi|328688775|gb|AEB35999.1| ATML1 [Helianthus exilis]
 gi|328688779|gb|AEB36001.1| ATML1 [Helianthus exilis]
 gi|328688781|gb|AEB36002.1| ATML1 [Helianthus exilis]
 gi|328688783|gb|AEB36003.1| ATML1 [Helianthus exilis]
 gi|328688787|gb|AEB36005.1| ATML1 [Helianthus exilis]
 gi|328688799|gb|AEB36011.1| ATML1 [Helianthus tuberosus]
 gi|328688815|gb|AEB36019.1| ATML1 [Helianthus argophyllus]
 gi|328688817|gb|AEB36020.1| ATML1 [Helianthus argophyllus]
 gi|328688823|gb|AEB36023.1| ATML1 [Helianthus argophyllus]
 gi|328688825|gb|AEB36024.1| ATML1 [Helianthus argophyllus]
 gi|328688827|gb|AEB36025.1| ATML1 [Helianthus argophyllus]
 gi|328688829|gb|AEB36026.1| ATML1 [Helianthus argophyllus]
 gi|328688831|gb|AEB36027.1| ATML1 [Helianthus argophyllus]
 gi|328688833|gb|AEB36028.1| ATML1 [Helianthus argophyllus]
 gi|328688835|gb|AEB36029.1| ATML1 [Helianthus argophyllus]
 gi|328688837|gb|AEB36030.1| ATML1 [Helianthus argophyllus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328689001|gb|AEB36112.1| ATML1 [Helianthus annuus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688891|gb|AEB36057.1| ATML1 [Helianthus annuus]
 gi|328688893|gb|AEB36058.1| ATML1 [Helianthus annuus]
 gi|328688899|gb|AEB36061.1| ATML1 [Helianthus annuus]
 gi|328688901|gb|AEB36062.1| ATML1 [Helianthus annuus]
 gi|328689003|gb|AEB36113.1| ATML1 [Helianthus annuus]
 gi|328689005|gb|AEB36114.1| ATML1 [Helianthus annuus]
 gi|328689023|gb|AEB36123.1| ATML1 [Helianthus annuus]
 gi|328689025|gb|AEB36124.1| ATML1 [Helianthus annuus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688839|gb|AEB36031.1| ATML1 [Helianthus annuus]
 gi|328688841|gb|AEB36032.1| ATML1 [Helianthus annuus]
 gi|328688843|gb|AEB36033.1| ATML1 [Helianthus annuus]
 gi|328688845|gb|AEB36034.1| ATML1 [Helianthus annuus]
 gi|328688847|gb|AEB36035.1| ATML1 [Helianthus annuus]
 gi|328688849|gb|AEB36036.1| ATML1 [Helianthus annuus]
 gi|328688851|gb|AEB36037.1| ATML1 [Helianthus annuus]
 gi|328688853|gb|AEB36038.1| ATML1 [Helianthus annuus]
 gi|328688855|gb|AEB36039.1| ATML1 [Helianthus annuus]
 gi|328688857|gb|AEB36040.1| ATML1 [Helianthus annuus]
 gi|328688859|gb|AEB36041.1| ATML1 [Helianthus annuus]
 gi|328688861|gb|AEB36042.1| ATML1 [Helianthus annuus]
 gi|328688863|gb|AEB36043.1| ATML1 [Helianthus annuus]
 gi|328688865|gb|AEB36044.1| ATML1 [Helianthus annuus]
 gi|328688867|gb|AEB36045.1| ATML1 [Helianthus annuus]
 gi|328688869|gb|AEB36046.1| ATML1 [Helianthus annuus]
 gi|328688871|gb|AEB36047.1| ATML1 [Helianthus annuus]
 gi|328688873|gb|AEB36048.1| ATML1 [Helianthus annuus]
 gi|328688875|gb|AEB36049.1| ATML1 [Helianthus annuus]
 gi|328688877|gb|AEB36050.1| ATML1 [Helianthus annuus]
 gi|328688879|gb|AEB36051.1| ATML1 [Helianthus annuus]
 gi|328688881|gb|AEB36052.1| ATML1 [Helianthus annuus]
 gi|328688883|gb|AEB36053.1| ATML1 [Helianthus annuus]
 gi|328688885|gb|AEB36054.1| ATML1 [Helianthus annuus]
 gi|328688887|gb|AEB36055.1| ATML1 [Helianthus annuus]
 gi|328688889|gb|AEB36056.1| ATML1 [Helianthus annuus]
 gi|328688895|gb|AEB36059.1| ATML1 [Helianthus annuus]
 gi|328688897|gb|AEB36060.1| ATML1 [Helianthus annuus]
 gi|328688903|gb|AEB36063.1| ATML1 [Helianthus annuus]
 gi|328688905|gb|AEB36064.1| ATML1 [Helianthus annuus]
 gi|328688909|gb|AEB36066.1| ATML1 [Helianthus annuus]
 gi|328688911|gb|AEB36067.1| ATML1 [Helianthus annuus]
 gi|328688913|gb|AEB36068.1| ATML1 [Helianthus annuus]
 gi|328688915|gb|AEB36069.1| ATML1 [Helianthus annuus]
 gi|328688917|gb|AEB36070.1| ATML1 [Helianthus annuus]
 gi|328688919|gb|AEB36071.1| ATML1 [Helianthus annuus]
 gi|328688921|gb|AEB36072.1| ATML1 [Helianthus annuus]
 gi|328688923|gb|AEB36073.1| ATML1 [Helianthus annuus]
 gi|328688925|gb|AEB36074.1| ATML1 [Helianthus annuus]
 gi|328688927|gb|AEB36075.1| ATML1 [Helianthus annuus]
 gi|328688929|gb|AEB36076.1| ATML1 [Helianthus annuus]
 gi|328688931|gb|AEB36077.1| ATML1 [Helianthus annuus]
 gi|328688933|gb|AEB36078.1| ATML1 [Helianthus annuus]
 gi|328688935|gb|AEB36079.1| ATML1 [Helianthus annuus]
 gi|328688937|gb|AEB36080.1| ATML1 [Helianthus annuus]
 gi|328688939|gb|AEB36081.1| ATML1 [Helianthus annuus]
 gi|328688941|gb|AEB36082.1| ATML1 [Helianthus annuus]
 gi|328688943|gb|AEB36083.1| ATML1 [Helianthus annuus]
 gi|328688945|gb|AEB36084.1| ATML1 [Helianthus annuus]
 gi|328688947|gb|AEB36085.1| ATML1 [Helianthus annuus]
 gi|328688949|gb|AEB36086.1| ATML1 [Helianthus annuus]
 gi|328688951|gb|AEB36087.1| ATML1 [Helianthus annuus]
 gi|328688953|gb|AEB36088.1| ATML1 [Helianthus annuus]
 gi|328688955|gb|AEB36089.1| ATML1 [Helianthus annuus]
 gi|328688957|gb|AEB36090.1| ATML1 [Helianthus annuus]
 gi|328688959|gb|AEB36091.1| ATML1 [Helianthus annuus]
 gi|328688961|gb|AEB36092.1| ATML1 [Helianthus annuus]
 gi|328688963|gb|AEB36093.1| ATML1 [Helianthus annuus]
 gi|328688965|gb|AEB36094.1| ATML1 [Helianthus annuus]
 gi|328688967|gb|AEB36095.1| ATML1 [Helianthus annuus]
 gi|328688969|gb|AEB36096.1| ATML1 [Helianthus annuus]
 gi|328688971|gb|AEB36097.1| ATML1 [Helianthus annuus]
 gi|328688973|gb|AEB36098.1| ATML1 [Helianthus annuus]
 gi|328688975|gb|AEB36099.1| ATML1 [Helianthus annuus]
 gi|328688977|gb|AEB36100.1| ATML1 [Helianthus annuus]
 gi|328688979|gb|AEB36101.1| ATML1 [Helianthus annuus]
 gi|328688981|gb|AEB36102.1| ATML1 [Helianthus annuus]
 gi|328688983|gb|AEB36103.1| ATML1 [Helianthus annuus]
 gi|328688985|gb|AEB36104.1| ATML1 [Helianthus annuus]
 gi|328688987|gb|AEB36105.1| ATML1 [Helianthus annuus]
 gi|328688989|gb|AEB36106.1| ATML1 [Helianthus annuus]
 gi|328688995|gb|AEB36109.1| ATML1 [Helianthus annuus]
 gi|328688997|gb|AEB36110.1| ATML1 [Helianthus annuus]
 gi|328688999|gb|AEB36111.1| ATML1 [Helianthus annuus]
 gi|328689007|gb|AEB36115.1| ATML1 [Helianthus annuus]
 gi|328689009|gb|AEB36116.1| ATML1 [Helianthus annuus]
 gi|328689011|gb|AEB36117.1| ATML1 [Helianthus annuus]
 gi|328689013|gb|AEB36118.1| ATML1 [Helianthus annuus]
 gi|328689015|gb|AEB36119.1| ATML1 [Helianthus annuus]
 gi|328689017|gb|AEB36120.1| ATML1 [Helianthus annuus]
 gi|328689019|gb|AEB36121.1| ATML1 [Helianthus annuus]
 gi|328689021|gb|AEB36122.1| ATML1 [Helianthus annuus]
 gi|328689027|gb|AEB36125.1| ATML1 [Helianthus annuus]
 gi|328689029|gb|AEB36126.1| ATML1 [Helianthus annuus]
 gi|328689031|gb|AEB36127.1| ATML1 [Helianthus annuus]
 gi|328689033|gb|AEB36128.1| ATML1 [Helianthus annuus]
 gi|328689035|gb|AEB36129.1| ATML1 [Helianthus annuus]
 gi|328689037|gb|AEB36130.1| ATML1 [Helianthus annuus]
 gi|328689039|gb|AEB36131.1| ATML1 [Helianthus annuus]
 gi|328689041|gb|AEB36132.1| ATML1 [Helianthus annuus]
 gi|328689043|gb|AEB36133.1| ATML1 [Helianthus annuus]
 gi|328689045|gb|AEB36134.1| ATML1 [Helianthus annuus]
 gi|328689047|gb|AEB36135.1| ATML1 [Helianthus annuus]
 gi|328689049|gb|AEB36136.1| ATML1 [Helianthus annuus]
 gi|328689051|gb|AEB36137.1| ATML1 [Helianthus annuus]
 gi|328689053|gb|AEB36138.1| ATML1 [Helianthus annuus]
 gi|328689059|gb|AEB36141.1| ATML1 [Helianthus annuus]
 gi|328689061|gb|AEB36142.1| ATML1 [Helianthus annuus]
 gi|328689063|gb|AEB36143.1| ATML1 [Helianthus annuus]
 gi|328689065|gb|AEB36144.1| ATML1 [Helianthus annuus]
 gi|328689067|gb|AEB36145.1| ATML1 [Helianthus annuus]
 gi|328689069|gb|AEB36146.1| ATML1 [Helianthus annuus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688907|gb|AEB36065.1| ATML1 [Helianthus annuus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688793|gb|AEB36008.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688795|gb|AEB36009.1| ATML1 [Helianthus tuberosus]
          Length = 149

 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|224074019|ref|XP_002304217.1| predicted protein [Populus trichocarpa]
 gi|60327631|gb|AAX19055.1| class III HD-Zip protein 6 [Populus trichocarpa]
 gi|222841649|gb|EEE79196.1| predicted protein [Populus trichocarpa]
          Length = 837

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 166/419 (39%), Gaps = 97/419 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
             +R E S L+  N KL A N  + +                            EN RL+
Sbjct: 75  --QRKEASRLQAVNRKLSAMNKLLME----------------------------ENDRLQ 104

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G F  R  +   P    ++S E             S VT+          
Sbjct: 105 KQVSQLVYENGYF--RQHTHNTPLATKDTSCE-------------SVVTSG--------- 140

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGS 369
            + L    PP  + P   GL    E ++  FL  A     E V+M     P      + S
Sbjct: 141 QHHLTPQHPPRDASPA--GLLSIAEETLTEFLSKATGTAVEWVQM-----PGMKPGPDSS 193

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           G   ++H         C G+         +R  G+V +    + E L D   W     C 
Sbjct: 194 GIVAISHG--------CAGV--------GARACGLVGLEPTRVAEILKDRPSWFR--DCR 235

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
                  +V+ +  GGT    ++L++ +L   + L P R+   LR+     +G   V + 
Sbjct: 236 AVD--VLNVLPTANGGT----IELLYMQLYAPTTLAPGRDFWLLRYTSVLEDGSLVVCER 289

Query: 490 SIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           S+   +     P    FV    LPSG +V+    G S +  V+H + +   V ++ +PL
Sbjct: 290 SLKNTQNGPSMPPVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 348


>gi|328688785|gb|AEB36004.1| ATML1 [Helianthus exilis]
          Length = 149

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 43/56 (76%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++ + D
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLVFGAKRWVATLDRQCERLASVMANNIPSGD 56


>gi|328688731|gb|AEB35977.1| ATML1 [Helianthus petiolaris]
          Length = 149

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/52 (59%), Positives = 41/52 (78%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           VTWVEH E+D+  VH +YK L+ SG+ FGA+RWVATL RQCE LA +M+ ++
Sbjct: 1   VTWVEHVEFDDRAVHNIYKLLVNSGLAFGAKRWVATLDRQCERLASVMANNI 52


>gi|449468708|ref|XP_004152063.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Cucumis
           sativus]
 gi|449509074|ref|XP_004163485.1| PREDICTED: homeobox-leucine zipper protein ROC7-like [Cucumis
           sativus]
          Length = 562

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 18/184 (9%)

Query: 391 PNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMG-----G 445
           P+G+  E S ET ++ I+S +L+  +MD  +WA MF  +I  +A+ +V+   +      G
Sbjct: 131 PHGYTVERSVETAILSISSQSLMSIMMDGAQWASMFSSIIC-SASDEVVFYPLKKFLLTG 189

Query: 446 TRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA-FV 504
                  LM+AE ++ +  +P     F+RF K      +A+ DVS D     +  P   V
Sbjct: 190 PCGWEFVLMNAEFRLPAGFLPRWNTRFMRFKKLIVGETYAIFDVSTDYFENMTADPTQKV 249

Query: 505 NCRRLPSGCVVQDMPNGY-SKVTWVEHAEYDE----SQVHQLYKPLIISGMGFGAQRWVA 559
             +R PSG +++  P G+ S+V W+E+AE  +    + +H  + P         A++W++
Sbjct: 250 VYKRRPSGVIIR--PCGFLSEVIWIENAEVQKIDIPNHLHSTFTP----NFHLTARQWIS 303

Query: 560 TLQR 563
            + +
Sbjct: 304 MISQ 307


>gi|169730542|gb|ACA64837.1| SKIP interacting protein 22 [Oryza sativa]
          Length = 855

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 174/451 (38%), Gaps = 122/451 (27%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 87

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L+  N  + +AM                     + L  EN RL+
Sbjct: 88  ----------RKEASRLQTVNRKL-NAM--------------------NKLLMEENDRLQ 116

Query: 252 DELDRVCALAGKF---LGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            ++ R+    G     L  P ++       ++S E             S VT+      G
Sbjct: 117 KQVSRLVYENGYMRTQLHNPSAATT-----DTSCE-------------SVVTS------G 152

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEG 368
                  P V+ P R      GL         L +A   + E +  A      W++    
Sbjct: 153 QHHQQQNPAVLHPQRDANNPAGL---------LAIAEETLAEFMSKATGTAVEWVQ---- 199

Query: 369 SGRQVLNHEEYLRTFTPCIGLKPN----GFVTE-------ASRETGMVIINSLALVETLM 417
                             +G+KP     G +T        A+R  G+V +    + E L 
Sbjct: 200 -----------------MVGMKPGPDSIGIITVSHNCSGVAARACGLVSLEPTKVAEILK 242

Query: 418 DPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCK 477
           D   W     C+        VI +G GGT    ++L++ +    + L   R+   LR+  
Sbjct: 243 DRPSWYRDCRCV----DIIHVIPTGNGGT----IELIYMQTHAPTTLAAPRDFWTLRYTS 294

Query: 478 QHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHA 531
              +G   + + S+    +++G P+      F+    LPSG +++    G S +  V+H 
Sbjct: 295 GLEDGSLVICERSLT---QSTGGPSGPNTLNFIRAEVLPSGYLIRPCEGGGSMIYIVDHV 351

Query: 532 EYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           + D   V ++ +PL  S      +  +A L+
Sbjct: 352 DLDAWSVPEVLRPLYESPKILAQKMTIAALR 382


>gi|89514839|gb|ABD75294.1| class III homeodomain-leucine zipper protein C3HDZ1 [Chara
           corallina]
          Length = 910

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 100/443 (22%), Positives = 184/443 (41%), Gaps = 55/443 (12%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +E +Q+K WFQNRR + K  
Sbjct: 5   KYVRYTNEQVEALERVYNECPKPSSARRSQLLQEYPILANIEPKQIKVWFQNRRCREK-- 62

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK- 251
            +R E + L   N KL A N  + +     +           ++S+E Q LR E A+ + 
Sbjct: 63  -QRKEATRLINMNAKLSALNKMLMEENERLMKQTT-------ELSMEVQVLRQELAKYRP 114

Query: 252 ---------------DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLS 296
                           +   V     + +   +S     P+  +++++  G       LS
Sbjct: 115 PPQSNGENLGLGDQQPDWHHVQEHITRKVESGLSVDVTSPLMMNAVQIQRGVHEDGSTLS 174

Query: 297 STVTTT---LPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
            +++ T   L AD  T +++A   V+  N   P V+   R+  +S  +++A   + E + 
Sbjct: 175 RSLSATSLSLRADASTTVTDASSEVV-VNGVQPSVSVSSRADSQSALMQMASDMVGEFLG 233

Query: 354 MAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
            A      W          +   +    TF     L+  G    ASR  G+V++    + 
Sbjct: 234 KATGTAVDWA--------NMPGTKNGPDTFEMVFILR--GGPGIASRVYGLVLMEPAKVA 283

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
             L D ++W       +     ++V+  G   T  G +++++ ++   + L P R+    
Sbjct: 284 SALKDRSQW-------LRECRKSEVL--GEFRTDQGTVEIVYTQMFAPTTLAPPRDFCTF 334

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
           R+     +G   + + S+         PAFV     PSG  ++   NG S +  V+H + 
Sbjct: 335 RYTTFMQDGSIVICERSMSGGTNLEPVPAFVRAEMHPSGYYIKPC-NGNSIIYIVDHVDL 393

Query: 534 DESQVHQLYKPLIISGMGFGAQR 556
               V ++ +PL  S     AQR
Sbjct: 394 KPLSVPEVLRPLYESSAAL-AQR 415


>gi|89514855|gb|ABD75302.1| class III homeodomain-leucine zipper protein C3HDZ1 [Psilotum
           nudum]
          Length = 827

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 175/443 (39%), Gaps = 109/443 (24%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R++ +Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYSNEQVEALERLYNECPKPSALRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E + L+  N KL A N   M   D ++  +                   L  EN 
Sbjct: 75  --QRKEAARLQTVNGKLTAMNKLLMEENDRLQKQV-----------------AQLLCENG 115

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            L+ +L +                                    GGL++T  T+  +   
Sbjct: 116 YLRQQLPQ------------------------------------GGLTTT-DTSCDSVVT 138

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR---- 364
           +G+ + LP    P       +G+         L LA  A+ E ++ A      WI+    
Sbjct: 139 SGLQH-LPTPQHPPHDAATHSGI---------LSLAEEALAEFLQKATGTAIDWIQMPGM 188

Query: 365 --SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
               + +G   ++H         C G+        A+R   +V +    +VE L D   W
Sbjct: 189 KPGPDSTGMINISHG--------CTGV--------AARACSLVGLEPAKVVEILKDRPSW 232

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
              + C       T + SS +G   NG +++++ ++   + L P R+   LR+     +G
Sbjct: 233 --HWDC----RQLTKLYSSNVGN--NGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDG 284

Query: 483 VWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH 539
            + + + S++       AP   +FV    LP G +++      S +  V+H + +   V 
Sbjct: 285 SYVICERSLNNTHGPPTAPHMQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVP 344

Query: 540 QLYKPLIISGMGFGAQRWVATLQ 562
           ++ +PL  S      +  +  L+
Sbjct: 345 EVLRPLYESSAALAHKITIPALR 367


>gi|242086246|ref|XP_002443548.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
 gi|241944241|gb|EES17386.1| hypothetical protein SORBIDRAFT_08g021350 [Sorghum bicolor]
          Length = 857

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 99/427 (23%), Positives = 166/427 (38%), Gaps = 107/427 (25%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 28  KYVRYTPEQVEALERVYSECPKPSSLRRQQL-IRDCPILSNIEPKQIKVWFQNRRCREKQ 86

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E+ +L+  N  +                     S   + L  EN RL+
Sbjct: 87  ----------RKESSRLQTVNRKL---------------------SAMNKLLMEENDRLQ 115

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ R+    G              M N      V T +      S VT+      G   
Sbjct: 116 KQVSRLVFDNGY-------------MKNRLHSPSVATTDT--SCESVVTS------GHHN 154

Query: 312 SNALPVVM-PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF---- 366
               P V+ PP R      GL         L +A   + E +  A      W++      
Sbjct: 155 QQQNPAVLHPPQRDANNPAGL---------LAIAEETLAEFMSKATGTAVNWVQMVGMKP 205

Query: 367 --EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAE 424
             +  G   ++H         C G+        A+R  G+V +    + E L D   W  
Sbjct: 206 GPDSVGIIAVSHN--------CSGV--------AARACGLVSLEPTKVAEILKDRASWYR 249

Query: 425 MFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVW 484
              C         VI +G GGT    ++L++ +   L+ L   R+   LR+     +G  
Sbjct: 250 --DCR--HVDILHVIPTGNGGT----IELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSL 301

Query: 485 AVVDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
            + + S+    +++G P+      F+    LPSG +++    G S +  V+H + + S V
Sbjct: 302 VICERSLT---QSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNASSV 358

Query: 539 HQLYKPL 545
            ++ +PL
Sbjct: 359 PEVLRPL 365


>gi|90110440|gb|ABD90522.1| class III homeodomain-leucine zipper [Physcomitrella patens]
          Length = 868

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 179/444 (40%), Gaps = 71/444 (15%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E + L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLENHSLRQ 108

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT-INGFGGLSSTVTTTLPADF 307
           +L  +    G       + +      N    SS + G+   ++G  G++ST T+      
Sbjct: 109 QLPSLPLTNGTHRLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSC----- 163

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR--- 364
            + ++  LP  + P  S        R    +  L  A   + E +  A      WI+   
Sbjct: 164 DSAVTGGLPHHLTPRHS-------PRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPG 216

Query: 365 ---SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
                +  G   ++H         C+G+        A+R  G+V +++  + E L D   
Sbjct: 217 MKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDAGKVTEVLKDRPA 260

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W E    M       +V+ +   G R G ++L++ ++   + L P R+   LR+     +
Sbjct: 261 WLEDCRRM-------EVLGALPTGNR-GTIELLYTQMYASTTLAPARDYCTLRYTTILED 312

Query: 482 GVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           G   + + S+   +     P   +FV     PSG +++    G   +  V+H +     V
Sbjct: 313 GNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSV 372

Query: 539 HQLYKPLIISGMGFGAQRWVATLQ 562
            ++ +PL  S      +  +A L+
Sbjct: 373 PEVLRPLYESPAVLAQRSTIAALR 396


>gi|449529531|ref|XP_004171753.1| PREDICTED: homeobox-leucine zipper protein HDG2-like, partial
           [Cucumis sativus]
          Length = 296

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%)

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           VTWVEH E D+  VH LYK L+ SG  FGA+RWV TL RQCE LA  M+T++   D
Sbjct: 1   VTWVEHVEVDDRGVHNLYKQLVSSGQAFGAKRWVTTLDRQCERLASAMATNIPTGD 56


>gi|115489546|ref|NP_001067260.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|122248513|sp|Q2QM96.1|HOX33_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|187609460|sp|A2ZMN9.2|HOX33_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX33; AltName:
           Full=HD-ZIP protein HOX33; AltName: Full=Homeodomain
           transcription factor HOX33; AltName: Full=OsHox33
 gi|77556590|gb|ABA99386.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113649767|dbj|BAF30279.1| Os12g0612700 [Oryza sativa Japonica Group]
 gi|218187239|gb|EEC69666.1| hypothetical protein OsI_39093 [Oryza sativa Indica Group]
 gi|222617467|gb|EEE53599.1| hypothetical protein OsJ_36852 [Oryza sativa Japonica Group]
          Length = 855

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 174/442 (39%), Gaps = 104/442 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 87

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L+  N  + +AM                     + L  EN RL+
Sbjct: 88  ----------RKEASRLQTVNRKL-NAM--------------------NKLLMEENDRLQ 116

Query: 252 DELDRVCALAGKF---LGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            ++ R+    G     L  P ++       ++S E             S VT+      G
Sbjct: 117 KQVSRLVYENGYMRTQLHNPSAATT-----DTSCE-------------SVVTS------G 152

Query: 309 TGISNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSF 366
                  P V+ P R      GL    E ++  F+  A     E V+M            
Sbjct: 153 QHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKP-----GP 207

Query: 367 EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMF 426
           +  G   ++H         C G+        A+R  G+V +    + E L D   W    
Sbjct: 208 DSIGIIAVSHN--------CSGV--------AARACGLVSLEPTKVAEILKDRPSWYRDC 251

Query: 427 PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAV 486
            C+        VI +G GGT    ++L++ +    + L   R+   LR+     +G   +
Sbjct: 252 RCV----DIIHVIPTGNGGT----IELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVI 303

Query: 487 VDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQ 540
            + S+    +++G P+      F+    LPSG +++    G S +  V+H + D   V +
Sbjct: 304 CERSLT---QSTGGPSGPNTPNFIRAEVLPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPE 360

Query: 541 LYKPLIISGMGFGAQRWVATLQ 562
           + +PL  S      +  +A L+
Sbjct: 361 VLRPLYESPKILAQKMTIAALR 382


>gi|89514847|gb|ABD75298.1| class III homeodomain-leucine zipper protein C3HDZ2 [Physcomitrella
           patens]
          Length = 876

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 98/445 (22%), Positives = 179/445 (40%), Gaps = 71/445 (15%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 14  KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 71

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E + L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 72  -QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLENHSLRQ 116

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT-INGFGGLSSTVTTTLPADF 307
           +L  +    G       + +      N    SS + G+   ++G  G++ST T+      
Sbjct: 117 QLPSLPLTNGTHRLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSC----- 171

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR--- 364
            + ++  LP  + P  S        R    +  L  A   + E +  A      WI+   
Sbjct: 172 DSAVTGGLPHHLTPRHS-------PRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPG 224

Query: 365 ---SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
                +  G   ++H         C+G+        A+R  G+V +++  + E L D   
Sbjct: 225 MKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDAGKVTEVLKDRPA 268

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W E    M       +V+ +   G R G ++L++ ++   + L P R+   LR+     +
Sbjct: 269 WLEDCRRM-------EVLGALPTGNR-GTIELLYTQMYASTTLAPARDYCTLRYTTILED 320

Query: 482 GVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           G   + + S+   +     P   +FV     PSG +++    G   +  V+H +     V
Sbjct: 321 GNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSV 380

Query: 539 HQLYKPLIISGMGFGAQRWVATLQR 563
            ++ +PL  S      +  +A L+ 
Sbjct: 381 PEVLRPLYESPAVLAQRSTIAALRH 405


>gi|110349526|gb|ABG73238.1| class III HD-Zip protein HB13 [Physcomitrella patens]
          Length = 877

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 179/444 (40%), Gaps = 71/444 (15%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 72

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E + L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 73  -QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHASQLTLENHSLRQ 117

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPN----SSLELGVGT-INGFGGLSSTVTTTLPADF 307
           +L  +    G       + +      N    SS + G+   ++G  G++ST T+      
Sbjct: 118 QLPSLPLTNGTHRLSSQNLLKKERAVNGGDESSTQGGICVKLHGQAGVASTDTSC----- 172

Query: 308 GTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR--- 364
            + ++  LP  + P  S        R    +  L  A   + E +  A      WI+   
Sbjct: 173 DSAVTGGLPHHLTPRHS-------PRYTSPAGLLATAEETLTEFLAKATGTAVDWIQLPG 225

Query: 365 ---SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNR 421
                +  G   ++H         C+G+        A+R  G+V +++  + E L D   
Sbjct: 226 MKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDAGKVTEVLKDRPA 269

Query: 422 WAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAE 481
           W E    M       +V+ +   G R G ++L++ ++   + L P R+   LR+     +
Sbjct: 270 WLEDCRRM-------EVLGALPTGNR-GTIELLYTQMYASTTLAPARDYCTLRYTTILED 321

Query: 482 GVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
           G   + + S+   +     P   +FV     PSG +++    G   +  V+H +     V
Sbjct: 322 GNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCIIHVVDHYDNGPWSV 381

Query: 539 HQLYKPLIISGMGFGAQRWVATLQ 562
            ++ +PL  S      +  +A L+
Sbjct: 382 PEVLRPLYESPAVLAQRSTIAALR 405


>gi|357126818|ref|XP_003565084.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 1
           [Brachypodium distachyon]
          Length = 839

 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 173/443 (39%), Gaps = 99/443 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE L+ ECP P   +R +L +   +    + +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREKQ- 73

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
                    R+E+ +L++ N  +  AM                     + L  EN RL+ 
Sbjct: 74  ---------RRESGRLQSLNRKL-TAM--------------------NKLLMEENDRLQK 103

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           ++  +    G +  +   S G                       +T  T+  +   +G  
Sbjct: 104 QVSSLVYENGYYRQQHTHSAG----------------------LATTDTSCESVVTSGQQ 141

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
             + V  PP  + P   GL    E ++  FL  A     E V+M     P      +  G
Sbjct: 142 QNVVVPPPPRDASPA--GLMSIAEETLTEFLSKATGTAVEWVQM-----PGMKPGPDSIG 194

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
              ++H         C G+        A+R  G+V +    + E L D   W      M 
Sbjct: 195 IIAISHG--------CAGV--------AARACGLVGMEPAKVAEILKDRPLWLRDCRSM- 237

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
                 +V+ +G     NG ++L++ +L   + L P R+   LR+     +G   V + S
Sbjct: 238 ---EVVNVLPAG----SNGTIELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERS 290

Query: 491 IDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL-- 545
           + + +     P    F+    LPSG +++    G S +  V+H + +   V ++ +PL  
Sbjct: 291 LSSKQGGPSMPLVQPFIRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYE 350

Query: 546 ----IISGMGFGAQRWVATLQRQ 564
               +   M   A R++  L  +
Sbjct: 351 SSAIVAQKMSMAALRYLRQLAHE 373


>gi|356522958|ref|XP_003530109.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 174/436 (39%), Gaps = 96/436 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 75

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E+ +L+A N  +  AM                     + L  EN RL+
Sbjct: 76  ----------RKESSRLQAVNRKL-TAM--------------------NKLLMEENDRLQ 104

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G F  R  + +      +++ E             S VT+        G 
Sbjct: 105 KQVSQLVYENGYF--RQHTQITTQATKDTNCE-------------SVVTS--------GQ 141

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGS 369
            + L    PP  + P   GL    E ++  FL  A     E V+M     P      +  
Sbjct: 142 QHNLITQHPPRDASPA--GLLSIAEETLAEFLSKATGTAVEWVQM-----PGMKPGPDSI 194

Query: 370 GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCM 429
           G   ++H         C G+        A+R  G+V +    + E L D   W     C 
Sbjct: 195 GIVAISHG--------CTGV--------AARACGLVGLEPTRVAEILKDQPLWFR--DCR 236

Query: 430 IARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDV 489
                  +V+ +  GGT    ++L++ +L   + L P R+   LR+     +G   + + 
Sbjct: 237 AVDV--LNVLPTANGGT----IELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICER 290

Query: 490 SIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLI 546
           S+   +     P    FV    LPSG +++    G S +  V+H + +   V ++ +PL 
Sbjct: 291 SLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLY 350

Query: 547 ISGMGFGAQRWVATLQ 562
            S      +  +A L+
Sbjct: 351 ESSTVLAQKTTMAALR 366


>gi|168023519|ref|XP_001764285.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684437|gb|EDQ70839.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 184/458 (40%), Gaps = 96/458 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K +
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKESPILANIEPKQIKVWFQNRRCREKQR 65

Query: 193 LERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPICTNCGGPAIIG 234
            E              N LL +EN++L         EN S+R  + +   TN        
Sbjct: 66  KEATRLVSVNAKLTALNKLLMEENERLAKHASQLTLENHSLRQQLPSLPLTN-------- 117

Query: 235 DISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGT-INGFG 293
                  H R+ +  L++ L +  A+ G                 SS + G+   ++G  
Sbjct: 118 -----GTH-RLSSQVLQNLLKKERAVNGG--------------DESSTQGGICVKLHGQA 157

Query: 294 GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVK 353
           G++ST T+       + ++  LP  + P  S        R    +  L  A   + E + 
Sbjct: 158 GVASTDTSC-----DSAVTGGLPHHLTPRHS-------PRYTSPAGLLATAEETLTEFLA 205

Query: 354 MAQTDEPLWIR------SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
            A      WI+        +  G   ++H         C+G+        A+R  G+V +
Sbjct: 206 KATGTAVDWIQLPGMKPGPDAIGIIAISHG--------CVGI--------AARACGLVAL 249

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
           ++  + E L D   W E    M       +V+ +   G R G ++L++ ++   + L P 
Sbjct: 250 DAGKVTEVLKDRPAWLEDCRRM-------EVLGALPTGNR-GTIELLYTQMYASTTLAPA 301

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSK 524
           R+   LR+     +G   + + S+   +     P   +FV     PSG +++    G   
Sbjct: 302 RDYCTLRYTTILEDGNLVICERSLTGGQNGPSMPPVQSFVRGEMFPSGYLIRPCDGGGCI 361

Query: 525 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           +  V+H +     V ++ +PL  S      +  +A L+
Sbjct: 362 IHVVDHYDNGPWSVPEVLRPLYESPAVLAQRSTIAALR 399


>gi|110349528|gb|ABG73239.1| class III HD-Zip protein HB14 [Physcomitrella patens]
          Length = 875

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/434 (22%), Positives = 173/434 (39%), Gaps = 85/434 (19%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 72

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E + L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 73  -QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHTSQLTLENHALRQ 117

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSST---VTTTLPADFG- 308
           ++  +    G+             +P+ S     G +NG G  SST   +   LP   G 
Sbjct: 118 QIPNLPFPDGRHR-----------LPSHSPLKIEGAVNG-GDESSTQGGICVKLPGQAGV 165

Query: 309 --------TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEP 360
                   + ++  LP  + P  S        R    +  L  A   + E +  A     
Sbjct: 166 ASTDTSCDSAVTGGLPHRVTPQHS-------PRDTSPAGLLATAEETLTEFLAKATGTAV 218

Query: 361 LWIR------SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVE 414
            WI+        +  G   ++H         C+G+        A+R  G+V +++  + E
Sbjct: 219 DWIQLPGMKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDASKVTE 262

Query: 415 TLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLR 474
            L D   W +   C   R      +S+  GGT    ++L++ ++   + L P R+   LR
Sbjct: 263 VLKDRPAWLQ--DCR--RMEVLGALSTANGGT----IELLYTQMYAPTTLAPARDYCTLR 314

Query: 475 FCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHA 531
           +     +G   + + S+   +     P   +FV      SG +++    G   +  V+H 
Sbjct: 315 YTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVVDHY 374

Query: 532 EYDESQVHQLYKPL 545
           + +  +V ++ +PL
Sbjct: 375 DKEPWRVPEVLRPL 388


>gi|109729912|tpg|DAA05770.1| TPA_inf: class III HD-Zip III protein HB8 [Zea mays]
 gi|413947684|gb|AFW80333.1| putative homeobox/bZIP/lipid-binding protein family [Zea mays]
          Length = 858

 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 170/418 (40%), Gaps = 92/418 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++ +Q+K WFQNRR + K  
Sbjct: 18  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREKQ- 76

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
                    R+E+ +L+A N  +                     +   + L  EN RL+ 
Sbjct: 77  ---------RKESSRLQAVNRKL---------------------TAMNKLLMEENDRLQK 106

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           ++ ++    G +  +  S+             G+ T +       +V T+ P +    ++
Sbjct: 107 QVSQLVYENGYYRQQTQSA-------------GLATTDTS---CESVVTSGPQN----VA 146

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
             LP   P + +GP   GL    E ++  FL  A     E V+M     P      +  G
Sbjct: 147 AVLPQAQPRD-AGPA--GLMSIAEETLTEFLSKATGTAVEWVQM-----PGMKPGPDSIG 198

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
              ++H         C G+        A+R  G+V +    + E L D   W      M 
Sbjct: 199 IIAISHG--------CPGV--------AARACGLVGMEPAKVAEVLKDRPLWLRDCRSM- 241

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
                 +V+ +G  GT    ++L++ +L   + L P R+   LR+     +G   V + S
Sbjct: 242 ---EVVNVLPAGTSGT----VELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERS 294

Query: 491 IDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           +   +     P    FV    LPSG +V+    G S +  V+H + +   V ++ +PL
Sbjct: 295 LGANQGGPSMPLVQPFVRGEMLPSGFLVRPSDGGGSVIHIVDHMDLEPWSVPEVVRPL 352


>gi|34393689|dbj|BAC83419.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|50508866|dbj|BAD31643.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 125

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/67 (49%), Positives = 44/67 (65%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DD     +    KR  RHT  QI+ LES+F+ C +    QR++L+K+L +E RQVKFWFQ
Sbjct: 41  DDSSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQRVQLAKKLGMEERQVKFWFQ 100

Query: 184 NRRTQMK 190
           NRRT+ K
Sbjct: 101 NRRTRKK 107


>gi|297851492|ref|XP_002893627.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339469|gb|EFH69886.1| hypothetical protein ARALYDRAFT_473277 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 840

 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 7/99 (7%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-L 173
           M   S DD D+ D      +Y R+TP+Q++ LE ++ ECP P   +R +L +    LC +
Sbjct: 1   MMAHSMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNI 60

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E RQ+K WFQNRR + K   +R E++ L+  N KL A N
Sbjct: 61  EPRQIKVWFQNRRCREK---QRKESARLQTVNRKLSAMN 96



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C+     T +VI +G GGT    ++L++ +
Sbjct: 214 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVIPTGNGGT----IELVNTQ 265

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L   R+   LR+     +G + V + S+ +       P   +FV  + L SG +
Sbjct: 266 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 325

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D S V ++ +PL  S      +  VA L+
Sbjct: 326 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALR 373


>gi|326504574|dbj|BAJ91119.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 880

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 94/420 (22%), Positives = 165/420 (39%), Gaps = 94/420 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-LETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +    LC +E +Q+K WFQNRR + K  
Sbjct: 52  KYVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCREKQ- 110

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
                    R+E+ +++  N                            + L   N  L +
Sbjct: 111 ---------RKESSRMQTVN----------------------------RKLTAMNKLLME 133

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           E DR+     + +   VS+         SL+  +   +     ++T  T+  +   +G  
Sbjct: 134 ENDRLQKQVSRLVYENVSA--------KSLKTKIHNAS-----AATTDTSCESVVTSGQQ 180

Query: 313 NALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
            AL    P  R      GL    E ++  F+  A     E V+M            +  G
Sbjct: 181 QALAAPRP-QRDANNPAGLLAIAEETLTAFMSKATGTAVEWVQMMGMKP-----GPDSIG 234

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
              ++H         CIG+        A+R  G+V +    + E L D   W     C+ 
Sbjct: 235 IIAVSHN--------CIGV--------AARACGLVSLEPTKVAEILKDRPSWYRDCRCV- 277

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
                  V  +G GGT    ++L++ +    + L   R+   LR+     +G   + + S
Sbjct: 278 ---DILHVFPTGNGGT----IELIYMQTYAPTTLAAPRDFWTLRYTCGLEDGSLVICERS 330

Query: 491 IDTIRETSG-----APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           +   + T G      P F+    LPSG +++    G S +  V+H + D   V ++ +PL
Sbjct: 331 L--TQSTGGPSGPNTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPL 388


>gi|168045580|ref|XP_001775255.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673468|gb|EDQ59991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 870

 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 172/435 (39%), Gaps = 83/435 (19%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L K       +E +Q+K WFQNRR + K  
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSVRRHQLIKESPILANIEPKQIKVWFQNRRCREK-- 63

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E + L   N KL A N  + +                  ++     L +EN  L+ 
Sbjct: 64  -QRKEATRLVSVNAKLTALNKLLMEENER--------------LAKHTSQLTLENHALRQ 108

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV-GTINGFGGLSST---VTTTLPADFG 308
           ++          L  P      P   N    L + G +NG G  SST   +   LP   G
Sbjct: 109 QIPN--------LPFPDGRHRLPSHVNLQSPLKIEGAVNG-GDESSTQGGICVKLPGQAG 159

Query: 309 ---------TGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDE 359
                    + ++  LP  + P  S        R    +  L  A   + E +  A    
Sbjct: 160 VASTDTSCDSAVTGGLPHRVTPQHS-------PRDTSPAGLLATAEETLTEFLAKATGTA 212

Query: 360 PLWIR------SFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALV 413
             WI+        +  G   ++H         C+G+        A+R  G+V +++  + 
Sbjct: 213 VDWIQLPGMKPGPDAIGIIAISHG--------CVGI--------AARACGLVALDASKVT 256

Query: 414 ETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           E L D   W +   C   R      +S+  GGT    ++L++ ++   + L P R+   L
Sbjct: 257 EVLKDRPAWLQ--DCR--RMEVLGALSTANGGT----IELLYTQMYAPTTLAPARDYCTL 308

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           R+     +G   + + S+   +     P   +FV      SG +++    G   +  V+H
Sbjct: 309 RYTTILEDGNLVICERSLTGGQGGHTMPPVQSFVRGEMYSSGYLIRPCEGGGCIIHVVDH 368

Query: 531 AEYDESQVHQLYKPL 545
            + +  +V ++ +PL
Sbjct: 369 YDKEPWRVPEVLRPL 383


>gi|6634772|gb|AAF19752.1|AC009917_11 Strong similarity to gb|Y10922 HD-Zip protein from Arabidopsis
           thaliana, containing START PF|01852, bZIP transcription
           factor PF|00170, and homeobox PF|00046 domains. ESTs
           gb|F20019, gb|Z46707, gb|Z46706, gb|F20018 come from
           this gene [Arabidopsis thaliana]
          Length = 840

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 7/99 (7%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-L 173
           M   S DD D+ D      +Y R+TP+Q++ LE ++ ECP P   +R +L +    LC +
Sbjct: 1   MAHHSMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNI 60

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E RQ+K WFQNRR + K   +R E++ L+  N KL A N
Sbjct: 61  EPRQIKVWFQNRRCREK---QRKESARLQTVNRKLSAMN 96



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C+     T +VI +G GGT    ++L++ +
Sbjct: 214 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVIPTGNGGT----IELVNTQ 265

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L   R+   LR+     +G + V + S+ +       P   +FV  + L SG +
Sbjct: 266 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 325

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D S V ++ +PL  S      +  VA L+
Sbjct: 326 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALR 373


>gi|15220758|ref|NP_174337.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
 gi|75096987|sp|O04292.1|ATBH9_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-9; AltName:
           Full=HD-ZIP protein ATHB-9; AltName: Full=Homeodomain
           transcription factor ATHB-9; AltName: Full=Protein
           PHAVOLUTA
 gi|2145358|emb|CAA71854.1| HD-Zip protein [Arabidopsis thaliana]
 gi|20069421|emb|CAD29544.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110741482|dbj|BAE98697.1| HD-Zip protein [Arabidopsis thaliana]
 gi|332193111|gb|AEE31232.1| homeobox-leucine zipper protein ATHB-9 [Arabidopsis thaliana]
          Length = 841

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 7/99 (7%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-L 173
           M   S DD D+ D      +Y R+TP+Q++ LE ++ ECP P   +R +L +    LC +
Sbjct: 2   MAHHSMDDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNI 61

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E RQ+K WFQNRR + K   +R E++ L+  N KL A N
Sbjct: 62  EPRQIKVWFQNRRCREK---QRKESARLQTVNRKLSAMN 97



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C+     T +VI +G GGT    ++L++ +
Sbjct: 215 AARACGLVSLEPMKVAEILKDRPSWFRDCRCV----ETLNVIPTGNGGT----IELVNTQ 266

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L   R+   LR+     +G + V + S+ +       P   +FV  + L SG +
Sbjct: 267 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFL 326

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D S V ++ +PL  S      +  VA L+
Sbjct: 327 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALR 374


>gi|253758739|ref|XP_002488890.1| hypothetical protein SORBIDRAFT_2315s002020 [Sorghum bicolor]
 gi|241947280|gb|EES20425.1| hypothetical protein SORBIDRAFT_2315s002020 [Sorghum bicolor]
          Length = 102

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 8/93 (8%)

Query: 454 MHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI--RETSGAPAFVN----CR 507
           M+AEL V SP +  R++NFLR+ K+ AEG WAV+DVS+D I  R T+ A    N    CR
Sbjct: 1   MNAELWVQSPRLLKRKINFLRYNKRVAEGQWAVMDVSVDGILGRRTTDAAVVANNTTGCR 60

Query: 508 RLPSGCVVQDM--PNGYSKVTWVEHAEYDESQV 538
            LPS C+++DM   NGY K  +   A    SQV
Sbjct: 61  LLPSDCLIEDMGKGNGYYKRQYEYLAVLHSSQV 93


>gi|302805045|ref|XP_002984274.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
 gi|300148123|gb|EFJ14784.1| hypothetical protein SELMODRAFT_180804 [Selaginella moellendorffii]
          Length = 836

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 163/425 (38%), Gaps = 71/425 (16%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +       +E RQ+K WFQNRR + K  
Sbjct: 13  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREK-- 70

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E S L+  N  L A N  I +                  ++     L +EN  L+ 
Sbjct: 71  -QRKETSRLQSVNSSLTAMNKIIMEENER--------------LTKHSSQLALENQCLRQ 115

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           +L +            + S G    P+          N      +    +  ++   G+ 
Sbjct: 116 QLQQ------------IRSGGGAADPDKKSAAAADRFNDQQSALALADRSPDSEVTGGVP 163

Query: 313 NALPVV-MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGR 371
             L +    P  S P   GL         L +A   ++  +  A      WI+       
Sbjct: 164 QHLAITPQSPRDSSPA--GL---------LSIAEETLNSFLAKATGTAVDWIQ------- 205

Query: 372 QVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM-VIINSLALVETLMDPNRWAEMF---P 427
                   +     C G  P+   T A    G  +   +  LVE  ++P R AE+    P
Sbjct: 206 --------IPGMKACPG--PDSIGTAAISHAGAGIAARAWGLVE--LEPIRVAEILKDRP 253

Query: 428 CMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVV 487
             +      +V+ S       G L+L++ ++   + L P R+   LR+     +   AV 
Sbjct: 254 SWLWDCRRLEVVGS-FPTPNGGTLELVYTQMYAPTTLAPARDFWTLRYTIFLEDRSLAVC 312

Query: 488 DVSIDTIRETSGAP--AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           + S+  I          F     LPSG +++    G S +  V+H + +  +V ++ +PL
Sbjct: 313 ERSLTGIHNKPAIKNGDFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLESWKVLEVLRPL 372

Query: 546 IISGM 550
             S +
Sbjct: 373 YESSV 377


>gi|312282957|dbj|BAJ34344.1| unnamed protein product [Thellungiella halophila]
          Length = 844

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 7/93 (7%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-LETRQVK 179
           DD D+ D      +Y R+TP+Q++ LE ++ ECP P   +R +L +    LC +E RQ+K
Sbjct: 11  DDRDSPDKGFDSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIK 70

Query: 180 FWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
            WFQNRR + K   +R E++ L+  N KL A N
Sbjct: 71  VWFQNRRCREK---QRKESARLQTVNRKLSAMN 100



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + +VE L D   W     C+     T  VI +G GGT    ++L++ +
Sbjct: 218 AARACGLVSLEPMKVVEILKDRPSWFRDCRCV----ETLSVIPTGNGGT----IELVNTQ 269

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L   R+   LR+     +G + V + S+ +       P   +FV  + L SG +
Sbjct: 270 IYAPTTLAAARDFWTLRYSTSLEDGSYVVCEKSLTSATGGPNGPLSSSFVRAKMLSSGFL 329

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D S V ++ +PL  S      +  VA L+
Sbjct: 330 IRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALR 377


>gi|226502384|ref|NP_001142394.1| uncharacterized protein LOC100274567 [Zea mays]
 gi|224030609|gb|ACN34380.1| unknown [Zea mays]
 gi|323388783|gb|ADX60196.1| HB homeobox transcription factor [Zea mays]
          Length = 854

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 163/427 (38%), Gaps = 107/427 (25%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R  L  R C     +E +Q+K WFQNRR + K 
Sbjct: 22  KYVRYTPEQVEALERVYSECPKPSSLRRQHL-IRDCPILRNIEPKQIKVWFQNRRCREKQ 80

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E+ +L+  N  +                     S   + L  EN RL+
Sbjct: 81  ----------RKESSRLQTVNRKL---------------------SAMNKLLMEENDRLQ 109

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ R+    G              M N      V T +      S VT+      G   
Sbjct: 110 KQVSRLVFDNGY-------------MKNRLHSPSVATTDT--SCESVVTS------GQHN 148

Query: 312 SNALPVVM-PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF---- 366
               P V+ PP R      GL         L +A   + E +  A      W++      
Sbjct: 149 QQQNPAVLHPPQRDANNPAGL---------LAIAEETLAEFMSKATGTAVNWVQMVGMKP 199

Query: 367 --EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAE 424
             +  G   ++H         C G+        A+R  G+V +    + E L D   W  
Sbjct: 200 GPDSVGIIAVSHN--------CSGV--------AARACGLVSLEPTKVAEILKDRASWYR 243

Query: 425 MFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVW 484
              C         VI +G GGT    ++L++ +   L+ L   R+   LR+     +G  
Sbjct: 244 --DCR--HVDVLHVIPTGNGGT----IELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSL 295

Query: 485 AVVDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
            + + S+    +++G P+      F+    LPSG +++    G S +  V+H   +   V
Sbjct: 296 VICERSLT---QSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSV 352

Query: 539 HQLYKPL 545
            ++ +PL
Sbjct: 353 PEVLRPL 359


>gi|302781336|ref|XP_002972442.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
 gi|110349518|gb|ABG73234.1| class III HD-Zip protein HDZ32 [Selaginella moellendorffii]
 gi|300159909|gb|EFJ26528.1| hypothetical protein SELMODRAFT_270954 [Selaginella moellendorffii]
          Length = 840

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 94/425 (22%), Positives = 163/425 (38%), Gaps = 74/425 (17%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +       +E RQ+K WFQNRR + K  
Sbjct: 13  KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLGNIEPRQIKVWFQNRRCREK-- 70

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
            +R E S L+  N  L A N  I +                  ++     L +EN  L+ 
Sbjct: 71  -QRKETSRLQSVNSSLTAMNKIIMEENER--------------LTKHSSQLALENQCLRQ 115

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           +L +            + S G    P+          N    L +    +  ++   G+ 
Sbjct: 116 QLQQ------------IRSGGGAADPDKKSAAAADRFNDQSAL-ALADRSPDSEVTGGVP 162

Query: 313 NALPVV-MPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGR 371
             L +    P  S P   GL         L +A   ++  +  A      WI+       
Sbjct: 163 QHLAITPQSPRDSSPA--GL---------LSIAEETLNSFLAKATGTAVDWIQ------- 204

Query: 372 QVLNHEEYLRTFTPCIGLKPNGFVTEASRETGM-VIINSLALVETLMDPNRWAEMF---P 427
                        P +   P+   T A    G  +   +  LVE  ++P R AE+    P
Sbjct: 205 ------------IPGMKPGPDSIGTAAISHAGAGIAARAWGLVE--LEPIRVAEILKDRP 250

Query: 428 CMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVV 487
             +      +V+ S       G L+L++ ++   + L P R+   LR+     +   AV 
Sbjct: 251 SWLWDCRRLEVVGS-FPTPNGGTLELVYTQMYAPTTLAPARDFWTLRYTIFLEDRSLAVC 309

Query: 488 DVSIDTIRETSGAP--AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           + S+  I          F     LPSG +++    G S +  V+H + +  +V ++ +PL
Sbjct: 310 ERSLTGIHNKPAIKNGDFERAEMLPSGFLIRPYEGGVSSIHVVDHWDLESWKVLEVLRPL 369

Query: 546 IISGM 550
             S +
Sbjct: 370 YESSV 374


>gi|414877999|tpg|DAA55130.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 953

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 98/427 (22%), Positives = 163/427 (38%), Gaps = 107/427 (25%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R  L  R C     +E +Q+K WFQNRR + K 
Sbjct: 121 KYVRYTPEQVEALERVYSECPKPSSLRRQHL-IRDCPILRNIEPKQIKVWFQNRRCREKQ 179

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E+ +L+  N                       +S   + L  EN RL+
Sbjct: 180 ----------RKESSRLQTVNR---------------------KLSAMNKLLMEENDRLQ 208

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ R+    G              M N      V T +      S VT+      G   
Sbjct: 209 KQVSRLVFDNGY-------------MKNRLHSPSVATTDT--SCESVVTS------GQHN 247

Query: 312 SNALPVVM-PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF---- 366
               P V+ PP R      GL         L +A   + E +  A      W++      
Sbjct: 248 QQQNPAVLHPPQRDANNPAGL---------LAIAEETLAEFMSKATGTAVNWVQMVGMKP 298

Query: 367 --EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAE 424
             +  G   ++H         C G+        A+R  G+V +    + E L D   W  
Sbjct: 299 GPDSVGIIAVSHN--------CSGV--------AARACGLVSLEPTKVAEILKDRASWYR 342

Query: 425 MFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVW 484
              C         VI +G GGT    ++L++ +   L+ L   R+   LR+     +G  
Sbjct: 343 --DCR--HVDVLHVIPTGNGGT----IELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSL 394

Query: 485 AVVDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQV 538
            + + S+    +++G P+      F+    LPSG +++    G S +  V+H   +   V
Sbjct: 395 VICERSLT---QSTGGPSGPNTPNFIRAEVLPSGYLIRPCDGGGSMIYIVDHVNLNACSV 451

Query: 539 HQLYKPL 545
            ++ +PL
Sbjct: 452 PEVLRPL 458


>gi|206572103|gb|ACI13684.1| putative REV HD-ZipIII [Malus x domestica]
          Length = 845

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 159/442 (35%), Gaps = 114/442 (25%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC----LETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +E RQ+K WFQNRR + K  
Sbjct: 25  KYVRYTSEQVEALERVYAECPKPSSLRRQQLIRECSILSNIEPRQIKVWFQNRRCREK-- 82

Query: 193 LERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENAR 249
            +R E+S L+  N KL A N   M   D ++  +                   L  EN  
Sbjct: 83  -QRKESSRLQTVNRKLSAMNKLLMEENDRLQKQV-----------------SQLVCENGY 124

Query: 250 LKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGT 309
           ++ +L    A      G  V +      P  SL       N   GL S    TL      
Sbjct: 125 MRQQLHSASAATTDASGDSVVT-----TPQHSLR----DANNPAGLLSVAEETLAEFLSK 175

Query: 310 GISNALPVV-MPPNRSGP---GVTGLDRSIERSMFLELALAAMDELVKMAQT--DEPLWI 363
               A+  V MP  + GP   G+  + +S          L ++ E  K+A+   D P W 
Sbjct: 176 ATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSL-EPTKIAEILKDRPSWF 234

Query: 364 RSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWA 423
           R               L  FT                                       
Sbjct: 235 RDCRS-----------LEVFT--------------------------------------- 244

Query: 424 EMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGV 483
            MFP             +G GGT    ++L++ +    + L P R+   LR+      G 
Sbjct: 245 -MFP-------------AGNGGT----IELIYTQTYAPTTLAPARDFWTLRYTATLDNGS 286

Query: 484 WAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQ 540
           + V + S+         + A  FV    LPSG +++    G S V  V+H   +   V +
Sbjct: 287 FVVCERSLSGSGAGPNPASASQFVRGAMLPSGYLIRPCEGGGSIVHIVDHLNLEAWSVPE 346

Query: 541 LYKPLIISGMGFGAQRWVATLQ 562
           + +PL  S      +  +A L+
Sbjct: 347 VLRPLYESSKVVAQRMTIAALR 368


>gi|359478353|ref|XP_002285176.2| PREDICTED: homeobox-leucine zipper protein REVOLUTA [Vitis
           vinifera]
          Length = 843

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 160/443 (36%), Gaps = 117/443 (26%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 26  KYVRYTAEQVEALERVYLECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 83

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E S L+  N KL A N   M   D ++  +                   L  EN 
Sbjct: 84  --QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQV-----------------SQLVCENG 124

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            ++ +L  V A         V++      P  SL       N   GL S    TL     
Sbjct: 125 YMRQQLQTVSATTDASCESVVTT------PQHSLR----DANNPAGLLSIAEETLAEFLS 174

Query: 309 TGISNALPVV-MPPNRSGP---GVTGLDRSIERSMFLELALAAMDELVKMAQT--DEPLW 362
                A+  V MP  + GP   G+  +  S          L ++ E  K+A+   D P W
Sbjct: 175 KATGTAVDWVQMPGMKPGPDSVGIFAISHSCSGVAARACGLVSL-EPSKIAEILKDRPSW 233

Query: 363 IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
            R               L  FT                                      
Sbjct: 234 FRDCRS-----------LEVFT-------------------------------------- 244

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
             MFP             +G GGT    ++L++ ++   + L P R+   LR+      G
Sbjct: 245 --MFP-------------AGNGGT----VELLYTQIYAPTTLAPARDFWTLRYTTSLDNG 285

Query: 483 VWAVVDVSID---TIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVH 539
              V + S+        T+ A  FV    LPSG +++    G S +  V+H   +   V 
Sbjct: 286 SLVVCERSLSGSGAGPNTAAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVP 345

Query: 540 QLYKPLIISGMGFGAQRWVATLQ 562
           ++ +PL  S      +  +A L+
Sbjct: 346 EVLRPLYESSRVVAQKMTIAALR 368


>gi|357503631|ref|XP_003622104.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355497119|gb|AES78322.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 201

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 1/60 (1%)

Query: 518 MPNGYSKVTWVEHAEY-DESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSV 576
           MPNG SKVTW+EH E  D + VH LY+ +I SG+ FGA++W+ TLQ  CE +A  +  SV
Sbjct: 1   MPNGKSKVTWIEHVEVEDRNPVHMLYRNVIYSGVAFGAEKWLTTLQIMCERIASYLMDSV 60


>gi|226531570|ref|NP_001146215.1| uncharacterized protein LOC100279785 [Zea mays]
 gi|219886211|gb|ACL53480.1| unknown [Zea mays]
 gi|414868944|tpg|DAA47501.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 854

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 160/425 (37%), Gaps = 103/425 (24%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q+  LE  + ECP P   +R +L +   +    E RQ+K WFQNRR + K  
Sbjct: 23  KYVRYTAEQVDALELAYGECPKPSSLRRQQLIRDCAVLTNVEPRQIKVWFQNRRCREKQ- 81

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKD 252
                    R+E+ +L+  N  +  AM                     + L  EN RL+ 
Sbjct: 82  ---------RRESSRLQTVNRKL-GAM--------------------NKLLMEENDRLQK 111

Query: 253 ELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGIS 312
           ++ R+    G              M N      V T +      S VT+      G    
Sbjct: 112 QVSRLVFDNGY-------------MKNRLHSPSVATTDT--SCESVVTS------GQHKQ 150

Query: 313 NALPVVM-PPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF----- 366
              P V+ PP R      GL         L +A   + E +  A      W++       
Sbjct: 151 QQNPAVLHPPQRDANNPAGL---------LAIAEETLAEFMSKATGTAVNWVQMVGMKPG 201

Query: 367 -EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C G+        A+R  G+V +    + E L D   W   
Sbjct: 202 PDSVGIIAVSHN--------CSGV--------AARACGLVSLEPTKVAEILKDRASWYR- 244

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
             C   R     VI +G GGT    ++L++ +   L+ L   R+   LR+     +G   
Sbjct: 245 -DCR--RVDILHVIPTGNGGT----IELIYMQTYALTTLAEPRDFWTLRYTSGLDDGSLV 297

Query: 486 VVDVSIDTIRETSG-----APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQ 540
           + + S+     T G      P F+    LPSG +++    G S +  V+H + +   V +
Sbjct: 298 ICERSL--THSTGGPSGPKTPDFIRAEVLPSGYLIRPCDGGGSMIYIVDHVDLNACSVPE 355

Query: 541 LYKPL 545
           + +PL
Sbjct: 356 VLRPL 360


>gi|89514865|gb|ABD75307.1| class III homeodomain-leucine zipper protein C3HDZ2 [Ginkgo biloba]
          Length = 843

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 183/476 (38%), Gaps = 114/476 (23%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC----- 172
           M   +G D  A  +P    +Y R+T +Q++ LE L+ +CP P   +R +L  R C     
Sbjct: 1   MAVTAGKDGKAGMDP---GKYVRYTAEQVEALERLYHDCPKPSSIRRQQL-IRECPILSN 56

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI 232
           +E +Q+K WFQN                 R+  +K R E   ++   R     N      
Sbjct: 57  IEPKQIKVWFQN-----------------RRCREKQRKEASRLQTVNRKLTAMN------ 93

Query: 233 IGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGF 292
                   + L  EN RL+ ++ ++    G F  +         + N+S+          
Sbjct: 94  --------KLLMEENDRLQKQVSQLVYENGYFRQQ---------LQNASI---------- 126

Query: 293 GGLSSTVTTTLPADFGTGI---SNALPVVMPPNRSGPGVTGLDRSIERSM--FLELALAA 347
               +T  T+  +   +G     N L    PP  + P   GL    E ++  FL  A   
Sbjct: 127 ----ATTDTSCESVVTSGQHQQQNHLTARHPPRDASPA--GLLSIAEETLTEFLSKATGT 180

Query: 348 MDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII 407
             E ++M     P      +  G   ++H         C G+        A+R  G+V I
Sbjct: 181 AVEWIQM-----PGMKPGPDSIGIVAISHG--------CTGV--------AARACGLVGI 219

Query: 408 NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPV 467
               + E L D   W     C+   TA     S+G GGT    ++L++ ++   + L   
Sbjct: 220 EPTKVAEILKDRPSWFRDCRCVDVLTA----FSTGNGGT----VELLYMQMYAPTTLASA 271

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPSGCVVQDMPNG 521
           R+   LR+     +G   V + S+     T G P+      FV    LPSG +++    G
Sbjct: 272 RDFWTLRYTSVLEDGSLVVCERSLSG---TQGGPSMPPVQHFVRAEMLPSGYLIRPCEGG 328

Query: 522 YSKVTWVEHAEYDESQVHQLYKPLIISG------MGFGAQRWVATLQRQCECLAIL 571
            S +  V+H + +   V ++ +PL  S       M   A R +  + ++  C  +L
Sbjct: 329 GSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAALRHLRQIAQEVSCDVVL 384


>gi|356533043|ref|XP_003535078.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 9/91 (9%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFW 181
           D+A+N     +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K W
Sbjct: 8   DSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVW 66

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FQNRR + K   +R E S L+  N KL A N
Sbjct: 67  FQNRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        ++ +G GGT    ++L++ +
Sbjct: 212 AARACGLVSLEPTKVAEILKDRQSWYRDCRCV----DVLSIVPTGNGGT----IELLYMQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+ +   ++G P       FV    LPS
Sbjct: 264 TYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTS---STGGPTGPPSTTFVRAEMLPS 320

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +V+    G S +  V+H + D   V ++ +PL  S      +  +A LQ
Sbjct: 321 GFLVRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKFLAQKLTIAALQ 371


>gi|356555875|ref|XP_003546255.1| PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine
           max]
          Length = 846

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 9/91 (9%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFW 181
           D+A+N     +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K W
Sbjct: 8   DSANNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVW 66

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FQNRR + K   +R E S L+  N KL A N
Sbjct: 67  FQNRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        ++ +G GGT    ++LM+ +
Sbjct: 212 AARACGLVSLEPTKVAEILKDRQSWYRDCRCV----DVLSIVPTGNGGT----IELMYMQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+ +   ++G PA      FV    LPS
Sbjct: 264 TYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTS---STGGPAGPPSTTFVRAEMLPS 320

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A LQ
Sbjct: 321 GFLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAALQ 371


>gi|242039345|ref|XP_002467067.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
 gi|241920921|gb|EER94065.1| hypothetical protein SORBIDRAFT_01g019120 [Sorghum bicolor]
          Length = 838

 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 38/187 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVETLERVYAECPKPSSARRQQL-LRECPILSNIEPKQIKVWFQNRRCRDKQ 85

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC-------TN 226
           + E              N LL +EN++L+        EN  ++  ++NP         +N
Sbjct: 86  RKESSRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLANDASCDSN 145

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
              PA + D S     L I    L + L +    A  ++  P    G  P P+S    G+
Sbjct: 146 VTAPANLRDASNPSGLLSIAEETLTEFLSKATGTAIDWVQMP----GMKPGPDS---FGI 198

Query: 287 GTINGFG 293
            TI+  G
Sbjct: 199 VTISHGG 205



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  ++ +G GGT    ++L++ +
Sbjct: 209 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFT--MLPAGNGGT----IELVYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+      +  + A  FV    LPSG +
Sbjct: 261 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATAQQFVRAEMLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + D   V ++ +PL
Sbjct: 321 VRQCEGGGSIVRIVDHLDLDAWSVPEVLRPL 351


>gi|317160484|gb|ADV04324.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 845

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 98/440 (22%), Positives = 170/440 (38%), Gaps = 101/440 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTAEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 76

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L+A N  +                     S   + L  EN RL+
Sbjct: 77  ----------RKEASRLQAVNRKL---------------------SAMNKLLMEENDRLQ 105

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G F  +         + N+S+             + T   ++        
Sbjct: 106 KQVSQLVYENGYFRQQ---------LQNASI-----------ATTDTSCESVVTSVKHQQ 145

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
            N L    PP  + P   GL         L +A   + E +  A+ +   WI+       
Sbjct: 146 QNHLTPRDPPRDASPA--GL---------LSIAEETLTEFLSKAKGNAVEWIQMPGMKPG 194

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C G+        A+R   +V I+   + E L D   W   
Sbjct: 195 PDAIGIVTISHG--------CTGV--------AARACSLVGIDPTKVAEILKDRTSWLRD 238

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
              +   TA     S+G GGT    ++L++ ++   + L   R+   LR+     +G   
Sbjct: 239 CRSVDVLTA----FSTGNGGT----VELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLV 290

Query: 486 VVDVSIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           V + S+   +     PA   FV     PSG +++    G S +  V+H + +   V ++ 
Sbjct: 291 VCERSLSGTQGGPSMPAVQHFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVL 350

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +A L+
Sbjct: 351 RPLYESSTVLAQKVTMAALR 370


>gi|255578153|ref|XP_002529946.1| DNA binding protein, putative [Ricinus communis]
 gi|223530576|gb|EEF32454.1| DNA binding protein, putative [Ricinus communis]
          Length = 842

 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 162/449 (36%), Gaps = 129/449 (28%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTAEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E+S L+  N KL A N   M   D ++  +                   L  EN 
Sbjct: 83  --QRKESSRLQTVNRKLTAMNKLLMEENDRLQKQV-----------------SQLVCENG 123

Query: 249 RLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFG 308
            ++ +L    A         V++      P  SL       N   GL S    TL     
Sbjct: 124 YMRQQLQTASAATDASCDSVVTT------PQHSLR----DANNPAGLLSIAEETLAEFLS 173

Query: 309 TGISNALPVV-MPPNRSGP---GVTGLDRSIERSMFLELALAAMDELVKMAQT--DEPLW 362
                A+  V MP  + GP   G+  + +S          L ++ E  K+A+   D P W
Sbjct: 174 KATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSL-EPTKIAEILKDRPSW 232

Query: 363 IRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRW 422
            R               L  FT                                      
Sbjct: 233 FRDCRS-----------LEVFT-------------------------------------- 243

Query: 423 AEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEG 482
             MFP             +G GGT    ++L+++++   + L P R+   LR+      G
Sbjct: 244 --MFP-------------AGNGGT----IELVYSQVYAPTTLAPARDFWTLRYTSSLDNG 284

Query: 483 VWAVVDVSIDTIRETSGAPA---------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEY 533
              V +      R  SG+ A         FV    LPSG +++    G S +  V+H   
Sbjct: 285 SLVVCE------RSLSGSGAGPNAAAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNL 338

Query: 534 DESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           +   V ++ +PL  S      +  +A L+
Sbjct: 339 EAWSVPEVLRPLYESSKVVAQKMTIAALR 367


>gi|350537501|ref|NP_001234296.1| homeodomain leucine zipper protein [Solanum lycopersicum]
 gi|211853240|emb|CAP16664.1| homeodomain leucine zipper protein [Solanum lycopersicum]
          Length = 285

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 80/144 (55%), Gaps = 19/144 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 64  PEKKR--RLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 121

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           QLER  + L             +R++NDKL++E +S+ + ++  +    GG     DI L
Sbjct: 122 QLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLMEKLQGKVVGGAGGNE-KSDI-L 179

Query: 239 EEQHLRIENARLKDELDRVCALAG 262
           E   + I   ++K E DR+ + +G
Sbjct: 180 EVDAMTILQVKVKAE-DRLSSGSG 202


>gi|90110446|gb|ABD90525.1| class III homeodomain-leucine zipper [Psilotum nudum]
          Length = 829

 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/440 (21%), Positives = 175/440 (39%), Gaps = 103/440 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R++ +Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYSNEQVEALERLYNECPKPSALRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 75

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L+  N                     G ++   + L  EN RL+
Sbjct: 76  ----------RKEAARLQTVN---------------------GKLTAMNKLLMEENDRLQ 104

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G    +         +P              GGL++T  T+  +   +G+
Sbjct: 105 KQVAQLLRENGYLRQQ---------LPQ-------------GGLTTT-DTSCDSVVTSGL 141

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
            + LP    P       +G+         L LA  A+ E ++ A      WI+       
Sbjct: 142 QH-LPTPQHPPHDAATHSGI---------LSLAEEALAEFLQKATGTAIDWIQMPGMKPG 191

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            + +G   ++H         C G+        A+R   +V +    +VE L     W   
Sbjct: 192 PDSTGMINISHG--------CTGV--------AARACSLVGLEPAKVVEILKGRPSW--H 233

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
           + C       T + SS +G   NG +++++ ++   + L P R+   LR+     +G + 
Sbjct: 234 WDC----RQLTKLYSSNVGN--NGTIEVLYMQMYAPTTLAPARDFCTLRYTSPLEDGSYV 287

Query: 486 VVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           + + S++       AP   +FV    LP G +++      S +  V+H + +   V ++ 
Sbjct: 288 ICERSLNNTHGPPTAPHMQSFVRAEMLPCGYLIRPCEGSGSILIIVDHMDLESWTVPEVL 347

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +  L+
Sbjct: 348 RPLYESSAALAHKITIPALR 367


>gi|414871038|tpg|DAA49595.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 835

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 38/187 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 21  KYVRYTPEQVEALERVYAECPKPSSARRQQL-LRECPILSNIEAKQIKVWFQNRRCRDKQ 79

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC-------TN 226
           + E              N LL +EN++L+        EN  ++  ++NP         +N
Sbjct: 80  RNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLATDASCESN 139

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
              PA + D S     L I    L + L +    A  ++  P    G  P P+S    G+
Sbjct: 140 ATTPANLRDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMP----GMKPGPDS---FGI 192

Query: 287 GTINGFG 293
            TI+  G
Sbjct: 193 VTISHGG 199



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  ++ +G GGT    ++L++ +
Sbjct: 203 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVYT--MLPAGNGGT----IELVYMQ 254

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+    +   A     FV    LPSG +
Sbjct: 255 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFVRAEMLPSGYL 314

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + D   V ++ +PL
Sbjct: 315 VRQCEGGGSIVRIVDHLDLDAWSVPEVLRPL 345


>gi|224113651|ref|XP_002332526.1| predicted protein [Populus trichocarpa]
 gi|60327625|gb|AAX19052.1| class III HD-Zip protein 3 [Populus trichocarpa]
 gi|222832638|gb|EEE71115.1| predicted protein [Populus trichocarpa]
          Length = 843

 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 7/91 (7%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-LETRQVKFW 181
           + + D      +Y R+TP+Q++ LE ++ ECP P   +R +L +    LC +E +Q+K W
Sbjct: 5   MHSKDKQMDSSKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILCNIEPKQIKVW 64

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FQNRR + K   +R E+S L+  N KL A N
Sbjct: 65  FQNRRCREK---QRKESSRLQTVNRKLTAMN 92



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 210 AARACGLVSLEPIKVAEILKDRPSWFRDCRCL----DIMSVIPTGSGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
               + L   R+   LR+     +G   + + S+ +   ++G P      +FV    LPS
Sbjct: 262 TYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTS---STGGPTGPPSSSFVRADMLPS 318

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A LQ
Sbjct: 319 GYLIRPCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALQ 369


>gi|110349542|gb|ABG73246.1| class III HD-Zip protein HDZ32 [Pinus taeda]
          Length = 844

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 94/423 (22%), Positives = 164/423 (38%), Gaps = 101/423 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTAEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 76

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L+A N  +                     S   + L  EN RL+
Sbjct: 77  ----------RKEASRLQAVNRKL---------------------SAMNKLLMEENDRLQ 105

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
            ++ ++    G F  +         + N+S+             + T   ++        
Sbjct: 106 KQVSQLVYENGYFRQQ---------LQNASI-----------ATTDTSCESVVTSVKHQQ 145

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
            N L    PP  + P   GL         L +A   + E +  A+ +   WI+       
Sbjct: 146 QNHLTPRDPPRDASPA--GL---------LSIAEETLTEFLSKAKGNAVEWIQMPGMKPG 194

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            +  G   ++H         C G+        A+R   +V I+   + E L D   W   
Sbjct: 195 PDAIGIVTISHG--------CTGV--------AARACSLVGIDPTKVAEILKDRTSWLRD 238

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
              +   TA     S+G GGT    ++L++ ++   + L   R+   LR+     +G   
Sbjct: 239 CRSVDVLTA----FSTGNGGT----IELLYMQMYAPTTLASARDFWTLRYTSVLEDGSLV 290

Query: 486 VVDVSIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           V + S+   +     PA   FV     PSG +++    G S +  V+H + +   V ++ 
Sbjct: 291 VCERSLSGTQGGPSMPAVQQFVRAEMQPSGYLIRPCEGGGSLIHIVDHMDLEPWSVPEVL 350

Query: 543 KPL 545
           +PL
Sbjct: 351 RPL 353


>gi|242070535|ref|XP_002450544.1| hypothetical protein SORBIDRAFT_05g006726 [Sorghum bicolor]
 gi|241936387|gb|EES09532.1| hypothetical protein SORBIDRAFT_05g006726 [Sorghum bicolor]
          Length = 58

 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD 580
           ++T V HAEYDE+ V  L++PL+ SG  FGAQRW+A+LQRQ E LA+L S+ V   D
Sbjct: 1   QITRVVHAEYDETMVPTLFRPLLRSGNPFGAQRWLASLQRQYEYLAVLHSSQVPRGD 57


>gi|357513433|ref|XP_003627005.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|355521027|gb|AET01481.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 832

 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E RQ+K WFQNRR + K 
Sbjct: 15  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPRQIKVWFQNRRCREKQ 73

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC-TNCGGPAI 232
           + E              N LL +END+L+        EN   R   +N    T+C     
Sbjct: 74  RKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQNATKDTSCDSVVT 133

Query: 233 IGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
            G  ++  QH          L I    L + L +    A +++  P    GP
Sbjct: 134 SGQHNMTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 185



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 195 HGCTGVAARACGLVGLEPTRVAEILKDRPLWFR--DCRAVDI--VNVLPTANGGT----I 246

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   + + S+   +        P FV    
Sbjct: 247 ELLYMQLYAPTTLAPARDFWLLRYTSVVEDGSLVICERSLKNTQNGPSMPPVPHFVRADM 306

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S M    +  +A L+
Sbjct: 307 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAALR 360


>gi|414871037|tpg|DAA49594.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 648

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 38/187 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 21  KYVRYTPEQVEALERVYAECPKPSSARRQQL-LRECPILSNIEAKQIKVWFQNRRCRDKQ 79

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC-------TN 226
           + E              N LL +EN++L+        EN  ++  ++NP         +N
Sbjct: 80  RNESSRLQSVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLATDASCESN 139

Query: 227 CGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGV 286
              PA + D S     L I    L + L +    A  ++  P    G  P P+S    G+
Sbjct: 140 ATTPANLRDASNPSGLLAIAEETLTEFLSKATGTAIDWVQMP----GMKPGPDS---FGI 192

Query: 287 GTINGFG 293
            TI+  G
Sbjct: 193 VTISHGG 199



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  ++ +G GGT    ++L++ +
Sbjct: 203 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVYT--MLPAGNGGT----IELVYMQ 254

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+    +   A     FV    LPSG +
Sbjct: 255 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGDGQSAATTQQFVRAEMLPSGYL 314

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + D   V ++ +PL
Sbjct: 315 VRQCEGGGSIVRIVDHLDLDAWSVPEVLRPL 345


>gi|89514859|gb|ABD75304.1| class III homeodomain-leucine zipper protein C3HDZ3 [Psilotum
           nudum]
          Length = 856

 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q+Q LE L+ ECP+P   +RL+L K  C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTHEQVQLLERLYNECPNPSSFRRLQLLKD-CPILSNIEPKQIKVWFQNRRCRDK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L   N+KL A N
Sbjct: 74  --QRKESSRLVSLNEKLSAMN 92


>gi|63095203|gb|AAY32332.1| HB1 [Phyllostachys praecox]
          Length = 824

 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 24/113 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 12  KYVRYTPEQVEALERMYAECPKPSSTRRQQL-LRECPILANIEPKQIKVWFQNRRCRDKQ 70

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPICTN 226
           + E              N LL +END+L+        EN  ++  ++NP   N
Sbjct: 71  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENAYMKQQLQNPSLAN 123



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R   +V +    +VE L D   W     C         +  +G GGT    ++L++ +
Sbjct: 194 AARACDLVNLEPTKVVEILKDRPSWF----CDRQSLEVFTMFPAGNGGT----IELVYTQ 245

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   FV    LPSG +
Sbjct: 246 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQFVRAEMLPSGYL 305

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 306 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 336


>gi|109729909|tpg|DAA05768.1| TPA_inf: class III HD-Zip protein CNA2 [Medicago truncatula]
          Length = 518

 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 35/172 (20%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E RQ+K WFQNRR + K 
Sbjct: 15  KYVRYTPEQVEALERLYHECPKPSSIRRQQLI-RECPILSNIEPRQIKVWFQNRRCREKQ 73

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC-TNCGGPAI 232
           + E              N LL +END+L+        EN   R   +N    T+C     
Sbjct: 74  RKESFRLQGVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYFRQNTQNATKDTSCDSVVT 133

Query: 233 IGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
            G  ++  QH          L I    L + L +    A +++  P    GP
Sbjct: 134 SGQHNMTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 185



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 12/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 195 HGCTGVAARACGLVGLEPTRVAEILKDRPLWFR--DCRA--VDIVNVLPTANGGT----I 246

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   + + S+   +        P FV    
Sbjct: 247 ELLYMQLYAPTTLAPARDFWLLRYTSVVEDGS-LICERSLKNTQNGPSMPPVPHFVRADM 305

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S M    +  +A L+
Sbjct: 306 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESPMVLAQKTTMAALR 359


>gi|357146669|ref|XP_003574071.1| PREDICTED: homeobox-leucine zipper protein HOX9-like [Brachypodium
           distachyon]
          Length = 841

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E RQ+K WFQNRR + K 
Sbjct: 31  KYVRYTPEQVEALERVYAECPKPTSTRRQQL-LRECPILSNIEARQIKVWFQNRRCRDK- 88

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 89  --QRKESSRLQAVNRKLSAMN 107



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T   + +G GGT    ++L++ +
Sbjct: 214 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFTQ--LPAGNGGT----IELVYMQ 265

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V +           T+ A  FV    LPSG +
Sbjct: 266 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYL 325

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 326 VRPCDGGGSIVHMVDHLDLEAWSVPEVLRPL 356


>gi|356528394|ref|XP_003532788.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 849

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +   L    ET+Q+K WFQNRR + K  
Sbjct: 21  KYVRYTPEQVEALERVYIECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREK-- 78

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E S L+  N KL A N
Sbjct: 79  -QRKEASRLQTVNRKLSAMN 97



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++LM+ +
Sbjct: 215 AARACGLVSLEPTKVAEILKDRPSWYRDCRCL----NVLSVIPTGNGGT----IELMYMQ 266

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
               + L   R+   LR+     +G   + + S+ +       PA   FV    LPSG +
Sbjct: 267 TYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPAASNFVRAEMLPSGYL 326

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++    G S V  V+H + D   V ++ +PL
Sbjct: 327 IRSCEGGGSIVHIVDHVDLDVWSVPEVLRPL 357


>gi|449433543|ref|XP_004134557.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           ATHB-9-like [Cucumis sativus]
          Length = 847

 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 9/91 (9%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFW 181
           D ++      +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K W
Sbjct: 8   DTSNKQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVW 66

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FQNRR + K   +R E+S L+  N KL A N
Sbjct: 67  FQNRRCREK---QRKESSRLQSVNRKLSAMN 94



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 28/193 (14%)

Query: 387 IGLKPN----GFVTE-------ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
           IG+KP     G V         A+R  G+V +    + E L D   W     C+      
Sbjct: 190 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRLSWYRDCRCL----NV 245

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR 495
             VI +G GGT    ++L++ +    + L   R+   +R+     +G   V + S+ +  
Sbjct: 246 LSVIPTGNGGT----IELIYMQTYAPTTLAAARDFWTMRYTTSLEDGSLVVCERSLSS-- 299

Query: 496 ETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG 549
            +SG PA      FV    LPSG +++    G S +  V+H + D   V ++ +PL  S 
Sbjct: 300 -SSGGPAGPPPSTFVRAEMLPSGYLIRACEGGGSIIHIVDHIDLDVWSVPEVLRPLYESS 358

Query: 550 MGFGAQRWVATLQ 562
                +  +A L+
Sbjct: 359 KILAQKITIAALR 371


>gi|242033571|ref|XP_002464180.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
 gi|241918034|gb|EER91178.1| hypothetical protein SORBIDRAFT_01g013710 [Sorghum bicolor]
          Length = 854

 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 85

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 86  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNP 134



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 221 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DILHVIPTGNGGT----IELIYMQ 272

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+    +++G P+      FV    LPS
Sbjct: 273 TYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLT---QSTGGPSGPNTPNFVRAEVLPS 329

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 330 GYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALR 380


>gi|270271299|gb|ACZ67178.1| transcription factor HEX, partial [Populus deltoides]
          Length = 64

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
            Q +R +N +LR EN+ L+ +N  ++  +RN IC NCGG A++G I  EE  LR+ENARL
Sbjct: 1   AQQDRSDNLILRAENESLKNDNYRLQAELRNLICPNCGGQAMLGAIPFEE--LRLENARL 58

Query: 251 KDELDR 256
           +DEL+R
Sbjct: 59  RDELER 64


>gi|326526073|dbj|BAJ93213.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 840

 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E RQ+K WFQNRR + K 
Sbjct: 32  KYVRYTPEQVEALERVYAECPKPTSTRRQQL-LRECPILSNIEPRQIKVWFQNRRCRDK- 89

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 90  --QRKESSRLQAVNRKLSAMN 108



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  ++ +G GGT    ++L++ +
Sbjct: 215 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFT--MLPAGNGGT----IELVYMQ 266

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V +           T+ A  FV    LPSG +
Sbjct: 267 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYL 326

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 327 VRPCDGGGSIVHIVDHLDLEAWSVPEVLRPL 357


>gi|242070531|ref|XP_002450542.1| hypothetical protein SORBIDRAFT_05g006722 [Sorghum bicolor]
 gi|241936385|gb|EES09530.1| hypothetical protein SORBIDRAFT_05g006722 [Sorghum bicolor]
          Length = 58

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 40/58 (68%)

Query: 524 KVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDH 581
           ++TWV HAEYDE+ V  L+ PL+ SG  FG   W+A+LQRQ E LA+L S+ V   D+
Sbjct: 1   QITWVVHAEYDETVVPTLFGPLLRSGKTFGTHCWLASLQRQYEYLAVLHSSQVPRGDN 58


>gi|18034441|gb|AAL57495.1|AF443621_1 homeodomain leucine zipper protein CPHB-5 [Craterostigma
           plantagineum]
          Length = 285

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 16/102 (15%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+     + +++ EL+K+L L+ RQV  WFQNRR + KT 
Sbjct: 71  PEKKR--RLTAEQVHLLEKSFEAENKLEPERKAELAKKLGLQPRQVAIWFQNRRARWKTK 128

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMR 220
           QLER  + L             +RQENDKL+AE +S+ + ++
Sbjct: 129 QLERDYDKLKSSYDSLLSTYDSIRQENDKLKAELLSLNEKLQ 170


>gi|449436888|ref|XP_004136224.1| PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Cucumis
           sativus]
          Length = 842

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 22  KYVRYTPEQVEALERLYYECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 79

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 80  --QRKEASRLQTVNRKLTAMN 98



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W   F    A     +V+S+G GGT    +
Sbjct: 205 HGCTGVAARACGLVGLEPTRVAEILKD---WPSWFRDCRA-VDVLNVLSTGNGGT----I 256

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 257 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEM 316

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 317 LPSGYLIRPCEGGGSIIHIVDHMDLDPWSVPEVLRPLYKSSTLLAQKNTMAALR 370


>gi|206572107|gb|ACI13686.1| putative HB8 HD-ZipIII [Malus x domestica]
          Length = 844

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 21  KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 78

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 79  --QRKEASRLQTVNRKLTAMN 97



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V ++   + E L D   W              +V+S+G GGT    +
Sbjct: 208 HGCTGVAARACGLVGLDPTRVAEILKDRPSWFRN----CRSVDVLNVLSTGNGGT----I 259

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 260 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEM 319

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 320 LPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALR 373


>gi|115454289|ref|NP_001050745.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|75119691|sp|Q6AST1.1|HOX32_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|50881435|gb|AAT85280.1| homeobox leucine-zipper protein, putative [Oryza sativa Japonica
           Group]
 gi|108710033|gb|ABF97828.1| class III HD-Zip protein 4, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549216|dbj|BAF12659.1| Os03g0640800 [Oryza sativa Japonica Group]
 gi|215737063|dbj|BAG95992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 859

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 90

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 91  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNP 139



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 226 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DVLHVIPTGNGGT----IELIYMQ 277

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+    +++G P+      FV    LPS
Sbjct: 278 TYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLT---QSTGGPSGPNTPNFVRAEVLPS 334

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 335 GYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALR 385


>gi|187609448|sp|A2XK30.1|HOX32_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX32; AltName:
           Full=HD-ZIP protein HOX32; AltName: Full=Homeodomain
           transcription factor HOX32; AltName: Full=OsHox32
 gi|125545051|gb|EAY91190.1| hypothetical protein OsI_12798 [Oryza sativa Indica Group]
          Length = 859

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 90

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 91  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNP 139



 Score = 47.8 bits (112), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 226 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DVLHVIPTGNGGT----IELIYMQ 277

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+    +++G P+      FV    LPS
Sbjct: 278 TYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLT---QSTGGPSGPNTPNFVRAEVLPS 334

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 335 GYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALR 385


>gi|383930759|gb|AFH56718.1| class III HD-Zip protein 8 [Prunus persica]
          Length = 840

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 21  KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 78

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 79  --QRKEASRLQTVNRKLTAMN 97



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W              +V+S+G GGT    +
Sbjct: 204 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFRN----CRSVDVLNVLSTGNGGT----I 255

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 256 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEM 315

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 316 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALR 369


>gi|38198211|dbj|BAD01502.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 838

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 75

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 76  --QRKEASRLQSVNRKLTAMN 94



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 11/157 (7%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        DV+ +  GGT    +
Sbjct: 201 HGCTGVAARACGLVSLEPTRVAEILKDRTSWYR--DCRAVDV--LDVLPTANGGT----I 252

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRR 508
           +L++ +L   + L   R+   LR+     +G   V + S+      +     P FV    
Sbjct: 253 ELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIPSVPNFVRAEM 312

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           LPSG +++    G S +  V+H   +   V ++ +PL
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPL 349


>gi|18076738|emb|CAC84276.1| HD-Zip protein [Zinnia violacea]
          Length = 838

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 75

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 76  --QRKEASRLQSVNRKLTAMN 94



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 11/157 (7%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        DV+ +  GGT    +
Sbjct: 201 HGCTGVAARACGLVSLEPTRVAEILKDRTSWYR--DCRAVDV--LDVLPTANGGT----I 252

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRR 508
           +L++ +L   + L   R+   LR+     +G   V + S+      +     P FV    
Sbjct: 253 ELLYMQLYAPTTLATGRDFLLLRYTSVIEDGSLVVCERSLANTPNGQSIPSVPNFVRAEM 312

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           LPSG +++    G S +  V+H   +   V ++ +PL
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMNLEAWSVPEVLRPL 349


>gi|444436435|gb|AGE09585.1| HB1-like protein [Eucalyptus cladocalyx]
          Length = 844

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 46/199 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 23  KYVRYTPEQVEALERLYHECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 81

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 82  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTSCES 141

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGPPPMPN 279
               G   L  QH          L I    L + L +    A +++  P    G  P P+
Sbjct: 142 VVTSGQHQLTSQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMP----GMKPGPD 197

Query: 280 SSLELGVGTI-NGFGGLSS 297
           S   +G+  I +G  G+++
Sbjct: 198 S---IGIVAISHGCAGVAA 213



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 206 HGCAGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 257

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+   +     P    FV    
Sbjct: 258 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQPFVRAEM 317

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +V+    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 318 LPSGYLVRPCEGGGSIIRIVDHLDLEPWSVPEVLRPLYESSTMLAQKTTMAALRQ 372


>gi|255550932|ref|XP_002516514.1| DNA binding protein, putative [Ricinus communis]
 gi|223544334|gb|EEF45855.1| DNA binding protein, putative [Ricinus communis]
          Length = 782

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 22  KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 79

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 80  --QRKEASRLQAVNRKLTAMN 98



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 11/140 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C        + +S+G GGT    ++L++ +
Sbjct: 214 AARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNALSTGNGGT----IELLYMQ 265

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + L P R+   LR+     +G   + + S++  +     P    FV    LPSG +
Sbjct: 266 LYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLNNTQNGPSMPPTQHFVRAEMLPSGYL 325

Query: 515 VQDMPNGYSKVTWVEHAEYD 534
           ++    G S +  V+H + +
Sbjct: 326 IRPCEGGGSIIHIVDHVDLE 345


>gi|302398629|gb|ADL36609.1| BZIP domain class transcription factor [Malus x domestica]
          Length = 841

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 20  KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 77

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 78  --QRKEASRLQTVNRKLTAMN 96



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V ++   + E L D   W     C     A  +V+S+G GGT    +
Sbjct: 205 HGCTGVAARACGLVGLDPTRVAEILKDRPSWFRN--CRSVDVA--NVMSTGNGGT----I 256

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 257 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAEM 316

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 317 LPSGYLIRPCEGGGSILHIVDHMDLEPWSVPEVLRPLYESSTILAQKTTMAALR 370


>gi|224142954|ref|XP_002324794.1| predicted protein [Populus trichocarpa]
 gi|60327633|gb|AAX19056.1| class III HD-Zip protein 7 [Populus trichocarpa]
 gi|222866228|gb|EEF03359.1| predicted protein [Populus trichocarpa]
          Length = 823

 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPTSTRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W              DVI++ M     G +
Sbjct: 189 HGCTGVAARACGLVGLEPTRVAEILKDRPSW-------FRDCRAVDVINA-MSTANGGTI 240

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 241 ELLYMQLYAPTTLAPARDFLLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAEM 300

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 301 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALR 354


>gi|356512574|ref|XP_003524993.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Glycine max]
          Length = 853

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 15/90 (16%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +   L    ET+Q+K WFQNRR + K +
Sbjct: 23  KYVRYTPEQVEALERVYVECPKPSSSRRQQIIRECPLLANIETKQIKVWFQNRRCREKQR 82

Query: 193 LERHE-----------NSLLRQENDKLRAE 211
            E              N LL +END+L+ +
Sbjct: 83  KEASRLQTVNRKLSSMNKLLMEENDRLQKQ 112



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 12/175 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        V+S+G GGT    ++LM+ +
Sbjct: 219 AARACGLVSLEPTKVAEILKDRPSWYRDCRCL----NVLSVVSAGNGGT----IELMYMQ 270

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
               + L   R+   LR+     +G   + + S+ +       PA   F+    LPSG +
Sbjct: 271 TYAPTTLAAARDFWTLRYSTSLEDGSLVICERSLTSSTGGPTGPAASNFIRAEMLPSGYL 330

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
           ++    G S +  V+H + D   V ++ +PL  S   F AQ+      R    +A
Sbjct: 331 IRSCEGGGSIIHIVDHVDLDVWSVPEVLRPLYESP-KFLAQKLTTAALRHARQIA 384


>gi|224092274|ref|XP_002309538.1| predicted protein [Populus trichocarpa]
 gi|60327635|gb|AAX19057.1| class III HD-Zip protein 8 [Populus trichocarpa]
 gi|222855514|gb|EEE93061.1| predicted protein [Populus trichocarpa]
          Length = 828

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        + +S+G GGT    +
Sbjct: 189 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--VNALSTGSGGT----I 240

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV    
Sbjct: 241 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPTQHFVRAEM 300

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 301 LPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALR 354


>gi|357156427|ref|XP_003577453.1| PREDICTED: homeobox-leucine zipper protein HOX33-like [Brachypodium
           distachyon]
          Length = 875

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR---LC-LETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R ++ +    LC +E +Q+K WFQNRR + K  
Sbjct: 43  KYVRYTPEQVEALERVYTECPKPSSLRRQQIIRDCPILCNIEPKQIKVWFQNRRCREK-- 100

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E+S ++  N KL A N
Sbjct: 101 -QRKESSRMQTVNRKLTAMN 119



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 240 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DILHVIPTGNGGT----IELIYMQ 291

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + LV  R+   LR+     +G   + + S+    +++G P+      F+    LPS
Sbjct: 292 TYAPTTLVAPRDFWTLRYTSGLEDGSLVICERSLT---QSTGGPSGPNTPNFIRAEVLPS 348

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 349 GYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKTTIAALR 399


>gi|297852954|ref|XP_002894358.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
 gi|297340200|gb|EFH70617.1| ATHB-15 [Arabidopsis lyrata subsp. lyrata]
          Length = 837

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E + D   W              +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRE----CRAVDVMNVLPTANGGT----I 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LPSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQ 366


>gi|187609452|sp|A2WLR5.2|HOX29_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OsHox29
          Length = 861

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     ++ +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLV-RECPALANVDPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 63  --QRKESSRLQALNRKLTAMN 81



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 11/157 (7%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W       +    + DV++    G  NG +
Sbjct: 211 HGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMDVVNVLPAGA-NGTI 262

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    F+    
Sbjct: 263 ELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEM 322

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           LPSG +++    G S +  V+H + +   V ++ +PL
Sbjct: 323 LPSGFLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPL 359


>gi|115450213|ref|NP_001048707.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|75128608|sp|Q6TAQ6.1|HOX10_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
 gi|37813100|gb|AAR04340.1| homeodomain leucine-zipper protein Hox10 [Oryza sativa Japonica
           Group]
 gi|108705779|gb|ABF93574.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113547178|dbj|BAF10621.1| Os03g0109400 [Oryza sativa Japonica Group]
 gi|215717163|dbj|BAG95526.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 839

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG   D +   D+     +Y R+TP+Q++ LE ++ +CP P   +R +L  R C     +
Sbjct: 13  DGGGYDKVSGMDS----GKYVRYTPEQVEALERVYADCPKPTSSRRQQL-LRECPILANI 67

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 68  EPKQIKVWFQNRRCRDK---QRKESSRLQAVNRKLTAMN 103



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +I +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVVEILKDRPSWFR--DCRNLEVFT--MIPAGNGGT----VELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   +V    LPSG +
Sbjct: 262 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|187609456|sp|Q5QMZ9.2|HOX29_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX29; AltName:
           Full=HD-ZIP protein HOX29; AltName: Full=Homeodomain
           transcription factor HOX29; AltName: Full=OSHB5;
           AltName: Full=OsHox29
 gi|187369569|dbj|BAG31403.1| class III homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
          Length = 868

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 16/97 (16%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LET 175
           AS   +DA+       +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     ++ 
Sbjct: 3   ASAAAMDAS-------KYVRYTPEQVEALERLYYECPKPSSLRRQQLV-RECPALANVDP 54

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 55  KQIKVWFQNRRCREK---QRKESSRLQALNRKLTAMN 88



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 11/157 (7%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W       +    + DV++    G  NG +
Sbjct: 218 HGCAGVAARACGLVGMEPAKVAEILKDRPLW-------LRDCRSMDVVNVLPAGA-NGTI 269

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    F+    
Sbjct: 270 ELLYMQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEM 329

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           LPSG +++    G S +  V+H + +   V ++ +PL
Sbjct: 330 LPSGFLIRPSDVGGSVIHIVDHMDLEPWSVPEVVRPL 366


>gi|187471155|sp|A2XBL9.2|HOX10_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX10; AltName:
           Full=HD-ZIP protein HOX10; AltName: Full=Homeodomain
           transcription factor HOX10; AltName: Full=OsHB1;
           AltName: Full=OsHox10
          Length = 839

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG   D +   D+     +Y R+TP+Q++ LE ++ +CP P   +R +L  R C     +
Sbjct: 13  DGGGYDKVSGMDS----GKYVRYTPEQVEALERVYADCPKPTSSRRQQL-LRECPILANI 67

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 68  EPKQIKVWFQNRRCRDK---QRKESSRLQAVNRKLTAMN 103



 Score = 45.4 bits (106), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +I +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVVEILKDRPSWFR--DCRNLEVFT--MIPAGNGGT----VELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   +V    LPSG +
Sbjct: 262 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|108705780|gb|ABF93575.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
          Length = 626

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG   D +   D+     +Y R+TP+Q++ LE ++ +CP P   +R +L  R C     +
Sbjct: 13  DGGGYDKVSGMDS----GKYVRYTPEQVEALERVYADCPKPTSSRRQQL-LRECPILANI 67

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 68  EPKQIKVWFQNRRCRDK---QRKESSRLQAVNRKLTAMN 103



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +I +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVVEILKDRPSWFR--DCRNLEVFT--MIPAGNGGT----VELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   +V    LPSG +
Sbjct: 262 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           V+    G S V  V+H + +   V ++ +PL  S      +   A L+
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALR 369


>gi|383212091|dbj|BAM08932.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 839

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 102/449 (22%), Positives = 166/449 (36%), Gaps = 108/449 (24%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++  CP P   +R +L +       +E +Q+K WFQNRR + K  
Sbjct: 26  KYVRYTAEQVEALEKVYAVCPKPSSMRRQQLIRENPILSNIEPKQIKVWFQNRRCREKQ- 84

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQ--HLRIENARL 250
                    R+E+ +L+A N  +         T      +  +  L++Q   L  EN  +
Sbjct: 85  ---------RKESSRLQAVNRKL---------TALNKLLMEENERLQKQVAQLVHENTYM 126

Query: 251 KDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTG 310
           K +L  V       LG   S       P + L               T+T  L    GT 
Sbjct: 127 KQQLQNVS------LGNDTSCESVVTTPQNPLRDASNPAGLLSVAEETLTEFLSKATGTA 180

Query: 311 ISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSG 370
           +     V MP  + GP   G+                    V ++QT             
Sbjct: 181 VDW---VQMPGMKPGPDSIGI--------------------VAISQT------------- 204

Query: 371 RQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMI 430
                          C G+        A+R  G+V +    + E L D   W     C  
Sbjct: 205 ---------------CSGV--------AARACGLVSLEPTKVAEILKDRPSWFR--DCRS 239

Query: 431 ARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVS 490
               T  +  +G GGT    ++L++ ++   + L P R++  LR+     +G   V + S
Sbjct: 240 LEVFT--MFPAGNGGT----IELVYMQMYAPTTLAPARDLWTLRYTTNLEDGSLVVCERS 293

Query: 491 IDTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKP 544
           +   R + G P+      F      PSG +++    G S V  V+H   +   V ++ +P
Sbjct: 294 L---RGSGGGPSAASAHQFARAEMFPSGFLIRPCDGGGSIVHIVDHLNLEPWSVPEVLRP 350

Query: 545 LIISGMGFGAQRWVATLQRQCECLAILMS 573
           L  S     AQ+  A   R    +A  MS
Sbjct: 351 LYESSRVL-AQKMTAAALRHIRQIAQEMS 378


>gi|125542090|gb|EAY88229.1| hypothetical protein OsI_09681 [Oryza sativa Indica Group]
          Length = 857

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG   D +   D+     +Y R+TP+Q++ LE ++ +CP P   +R +L  R C     +
Sbjct: 13  DGGGYDKVSGMDS----GKYVRYTPEQVEALERVYADCPKPTSSRRQQL-LRECPILANI 67

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 68  EPKQIKVWFQNRRCRDK---QRKESSRLQAVNRKLTAMN 103



 Score = 45.4 bits (106), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +I +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVVEILKDRPSWFR--DCRNLEVFT--MIPAGNGGT----VELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   +V    LPSG +
Sbjct: 262 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|90110444|gb|ABD90524.1| class III homeodomain-leucine zipper [Selaginella kraussiana]
          Length = 820

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CL 173
           M    G DLD+        +Y R+TP+Q++ LE ++ ECP P   +R ++ +       +
Sbjct: 3   MTKDKGGDLDSG-------KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANI 55

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSI 215
           E RQ+K WFQNRR + K   +R E S L+  N  L A N  I
Sbjct: 56  EPRQIKVWFQNRRCREK---QRKETSRLQSVNSSLTAMNKII 94



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W  ++ C   R        +  GGT    L+L+++ 
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW--LWDCR--RLEVVGTFPTPNGGT----LELIYSR 275

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQ 516
           +   + L P R+   LR+     +    V + S+     +  G P F     LPSG +++
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
               G S +  V+H + +  +V ++ +PL  S +    +  +A LQ
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYESSVFLAQRVTIAALQ 381


>gi|24431605|gb|AAN61485.1| Putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|125584645|gb|EAZ25309.1| hypothetical protein OsJ_09120 [Oryza sativa Japonica Group]
          Length = 857

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 13/99 (13%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG   D +   D+     +Y R+TP+Q++ LE ++ +CP P   +R +L  R C     +
Sbjct: 13  DGGGYDKVSGMDS----GKYVRYTPEQVEALERVYADCPKPTSSRRQQL-LRECPILANI 67

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 68  EPKQIKVWFQNRRCRDK---QRKESSRLQAVNRKLTAMN 103



 Score = 45.4 bits (106), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +I +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVVEILKDRPSWFR--DCRNLEVFT--MIPAGNGGT----VELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + LVP R+   LR+     +G   V + S+        A +   +V    LPSG +
Sbjct: 262 LYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQYVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|110349514|gb|ABG73232.1| class III HD-Zip protein HDZ32 [Selaginella kraussiana]
          Length = 820

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CL 173
           M    G DLD+        +Y R+TP+Q++ LE ++ ECP P   +R ++ +       +
Sbjct: 3   MTKDKGGDLDSG-------KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANI 55

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSI 215
           E RQ+K WFQNRR + K   +R E S L+  N  L A N  I
Sbjct: 56  EPRQIKVWFQNRRCREK---QRKETSRLQSVNSSLTAMNKII 94



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 9/166 (5%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W  ++ C   R        +  GGT    L+L++++
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW--LWDCR--RLEVVGTFPTPNGGT----LELIYSQ 275

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQ 516
           +   + L P R+   LR+     +    V + S+     +  G P F     LPSG +++
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
               G S +  V+H + +  +V ++ +PL  S +    +  +A LQ
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYESSVFLAQRVTIAALQ 381


>gi|89514843|gb|ABD75296.1| class III homeodomain-leucine zipper protein C3HDZ1 [Phaeoceros
           carolinianus]
          Length = 861

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 97/440 (22%), Positives = 172/440 (39%), Gaps = 87/440 (19%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 19  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKD-CPILANIEAKQIKVWFQNRRCREKQ 77

Query: 192 QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLK 251
                     R+E  +L + N  +    +  +  N         +++E Q+LR +  +L 
Sbjct: 78  ----------RKEATRLLSVNAKLTALNKLLMEENERLSKHTSQLAIENQYLRQQQQQL- 126

Query: 252 DELDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGI 311
                   +    +G+P           S  +L          +++T T++  A  G G+
Sbjct: 127 --------VKSDCIGKPSR--------RSQEQLA---------MTTTDTSSESAVTG-GL 160

Query: 312 SNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIR------S 365
                   PP  + P   GL         L +A   + E +  A      WI+       
Sbjct: 161 QQHPTPQHPPRDASPA--GL---------LSIAEETLTEFLAKATGTAVDWIQMPGMKPG 209

Query: 366 FEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEM 425
            E  G   ++H         C G+        A+R  G+V +    + E L D   W  +
Sbjct: 210 PESIGIVAISHG--------CAGI--------AARACGLVGLEPTKVAEILKDRPSW--L 251

Query: 426 FPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWA 485
             C   R        +G GGT    ++L++ ++   + L P R+   LR+     +G   
Sbjct: 252 RDCR--RLDILGAFPTGNGGT----VELIYTQMYAPTTLAPPRDFCTLRYTTFLEDGNLV 305

Query: 486 VVDVSIDTIRETSGAP---AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLY 542
           + + S+         P    FV    LPSG +++    G S +  V+H + +   V ++ 
Sbjct: 306 ICERSLSGAHGGPTMPPVQYFVRAEMLPSGYLIRPCDGGGSIIHIVDHVDLEPWSVPEVL 365

Query: 543 KPLIISGMGFGAQRWVATLQ 562
           +PL  S      +  +  L+
Sbjct: 366 RPLYESSAVLAQKTTIGALR 385


>gi|357454819|ref|XP_003597690.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
 gi|109729907|tpg|DAA05767.1| TPA_inf: class III HD-Zip protein CNA1 [Medicago truncatula]
 gi|355486738|gb|AES67941.1| Homeobox-leucine zipper protein ATHB-15 [Medicago truncatula]
          Length = 836

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 38/175 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 14  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSHIEPKQIKVWFQNRRCREKQ 72

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 73  RKEASRLQAVNRKLSAMNKLLMEENDRLQKQVSHLVYENGYFRQHTQNTNLATKDTSCDS 132

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
               G  SL  QH          L I    L + L +    A +++  P    GP
Sbjct: 133 AVTSGQRSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGP 187



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C        +V+ +  GGT    ++L++ +
Sbjct: 203 AARACGLVGLEPTRVAEILKDRPSWYR--DCRAVDI--LNVLPTANGGT----IELLYMQ 254

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + L P R++  LR+     +G   + + S+   +     P    FV    LPSG +
Sbjct: 255 LYAPTTLAPARDLWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYL 314

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++    G S +  V+H + +   V ++ +PL
Sbjct: 315 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPL 345


>gi|89514851|gb|ABD75300.1| class III homeodomain-leucine zipper protein C3HDZ1 [Selaginella
           kraussiana]
          Length = 820

 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CL 173
           M    G DLD+        +Y R+TP+Q++ LE ++ ECP P   +R ++ +       +
Sbjct: 3   MTKDKGGDLDSG-------KYIRYTPEQVEALERVYHECPKPSSIRRQQIVRDYPVLANI 55

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSI 215
           E RQ+K WFQNRR + K   +R E S L+  N  L A N  I
Sbjct: 56  EPRQIKVWFQNRRCREK---QRKETSRLQSVNSSLTAMNKII 94



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W  ++ C       T    SG      G L+L++++
Sbjct: 224 AARAVGLVDLEPIRVAEILKDRPSW--LWDCRRLEVVGTFPTPSG------GTLELIYSQ 275

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR-ETSGAPAFVNCRRLPSGCVVQ 516
           +   + L P R+   LR+     +    V + S+     +  G P F     LPSG +++
Sbjct: 276 MYAPTTLAPARDFWTLRYTIFLEDRSLVVCEKSLTGAHGKHKGGPDFERAEMLPSGFLIR 335

Query: 517 DMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
               G S +  V+H + +  +V ++ +PL  S +    +  +A LQ
Sbjct: 336 PYEGGVSSIHIVDHYDLESWRVLEVLRPLYESSVFLAQRVTIAALQ 381


>gi|89514853|gb|ABD75301.1| class III homeodomain-leucine zipper protein C3HDZ2 [Selaginella
           kraussiana]
          Length = 840

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R +L +   L    E RQ+K WFQNRR + K  
Sbjct: 17  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREK-- 74

Query: 193 LERHENSLLRQENDKLRAENMSI 215
            +R E S L+  N  L A N  I
Sbjct: 75  -QRKETSRLQSVNSSLTAMNKII 96


>gi|110349512|gb|ABG73231.1| class III HD-Zip protein HDZ31 [Selaginella kraussiana]
          Length = 825

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R +L +   L    E RQ+K WFQNRR + K  
Sbjct: 2   KYVRYTPEQVEALERVYNECPKPSSIRRQQLLREYPLLANIEPRQIKVWFQNRRCREK-- 59

Query: 193 LERHENSLLRQENDKLRAENMSI 215
            +R E S L+  N  L A N  I
Sbjct: 60  -QRKETSRLQSVNSSLTAMNKII 81


>gi|356526091|ref|XP_003531653.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 843

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +RL+L  R C     ++ +Q+K WFQNRR + K 
Sbjct: 19  KYVRYTPEQVEALERLYHDCPKPSSIRRLQL-IRECPTLSHIDPKQIKVWFQNRRCREK- 76

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 77  --QRKESSRLQAVNRKLTAMN 95



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C        +V+ +  GGT    ++L++ +
Sbjct: 211 AARACGLVGLEPTRVAEILKDRPLWFR--DCRAVDV--LNVLPTANGGT----IELLYMQ 262

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + L P R+   LR+     +    + + S+   +     P    FV    LPSG +
Sbjct: 263 LYAPTTLAPARDFWLLRYTSVLEDSSLVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYL 322

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 323 IRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSKVLSQKTTMAALR 370


>gi|302190096|dbj|BAJ14107.1| PHABULOSA [Juncus prismatocarpus subsp. leschenaultii]
          Length = 857

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R +L +     + +E +Q+K WFQNRR + K  
Sbjct: 12  KYVRYTPEQVEALERVYNECPKPSSLKRQQLIRENPLLVNIEPKQIKVWFQNRRCREK-- 69

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E S L+  N KL A N
Sbjct: 70  -QRKEASRLQTVNRKLTAMN 88



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 27/180 (15%)

Query: 383 FTPCIGLKP-----------NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           + P +G+KP           N     A+R  G+V +    + E L D   W     C   
Sbjct: 189 WVPLVGMKPGPDSMGIIAVSNNCTGVAARACGLVSLEPTKVAEILKDKMSWYR--DCR-- 244

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI 491
           R     +I +G GG     ++L++ +    + + P R+   +R+     +G   + + S+
Sbjct: 245 RLDVLTIIPTGNGGN----IELIYMQTYAPTTIAPARDFWTVRYTTALDDGSLVICERSL 300

Query: 492 DTIRETSGAPA------FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
                T+G P       FV    LPSG +++    G S +  V+H + D   V ++ +PL
Sbjct: 301 TPT--TTGGPVGPTTAGFVRAEMLPSGYLIRPCDGGGSMIHIVDHVDLDAWNVPEVIRPL 358


>gi|225442503|ref|XP_002284014.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 3
           [Vitis vinifera]
          Length = 854

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 74  --QRKEASRLQAVNRKLTAMN 92



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 199 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 250

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+   +     P    FV    
Sbjct: 251 ELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 310

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 311 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 365


>gi|357120582|ref|XP_003562005.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Brachypodium
           distachyon]
          Length = 861

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q+  LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 35  KYVRYTPEQVDALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 93

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 94  RKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNP 142



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        +I +G GGT    ++L++ +
Sbjct: 229 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DVLQIIPTGNGGT----IELIYMQ 280

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRRLPSG 512
               + L   R+   LR+     +G   + + S+   + T G      P FV    LPSG
Sbjct: 281 TYAPTTLAAPRDFWILRYTSGLEDGSLVICERSL--TQATGGPSGPNTPNFVRAEVLPSG 338

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 339 YLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALR 388


>gi|225442501|ref|XP_002284003.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 1
           [Vitis vinifera]
          Length = 837

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 74  --QRKEASRLQAVNRKLTAMN 92



 Score = 46.6 bits (109), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 199 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 250

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+   +     P    FV    
Sbjct: 251 ELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 310

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 311 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 365


>gi|125524797|gb|EAY72911.1| hypothetical protein OsI_00785 [Oryza sativa Indica Group]
          Length = 886

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     ++ +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLV-RECPALANVDPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 63  --QRKESSRLQALNRKLTAMN 81


>gi|357129750|ref|XP_003566524.1| PREDICTED: homeobox-leucine zipper protein ROC8-like [Brachypodium
           distachyon]
          Length = 121

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLR 244
           RRT  + Q E   N  LR ENDK+R EN+++  A++N +   CGGP   G+    EQ L 
Sbjct: 47  RRTLFQAQHEHANNCFLRTENDKIRCENIAMSKALKNVVYPTCGGPP-SGEDFFAEQKLH 105

Query: 245 IENARLKDELDR 256
           ++NARLK+E+++
Sbjct: 106 MDNARLKEEVNK 117


>gi|383212093|dbj|BAM08933.1| class III homeobox-leucine zipper protein [Asparagus asparagoides]
          Length = 849

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 23  KYVRYTPEQVEALERVYSECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 80

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 81  --QRKEASRLQTVNRKLTAMN 99



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W      +   T    VI +G GG     ++LM+ +
Sbjct: 215 AARACGLVSLEPTKVAEILKDRPSWYRDCRSLDVLT----VIPTGNGGN----IELMYMQ 266

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+     ++G PA      FV    LPS
Sbjct: 267 TYAPTTLASARDFWTLRYTTGLEDGSLVICERSLT---PSTGGPAGPPASGFVRAEMLPS 323

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L 
Sbjct: 324 GYLIRPCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALH 374


>gi|297743212|emb|CBI36079.3| unnamed protein product [Vitis vinifera]
          Length = 835

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 14  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 71

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 72  --QRKEASRLQAVNRKLTAMN 90



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 197 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 248

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+   +     P    FV    
Sbjct: 249 ELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 308

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 309 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 363


>gi|225442505|ref|XP_002284009.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like isoform 2
           [Vitis vinifera]
          Length = 832

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 188 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 239

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+   +     P    FV    
Sbjct: 240 ELLYMQLYAPTTLAPARDFWLLRYTSVMEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEM 299

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 300 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 354


>gi|326505494|dbj|BAJ95418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q+  LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 41  KYVRYTPEQVDALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 99

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 100 RKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSRLVYENGYMRTHLSNP 148



 Score = 46.6 bits (109), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        +I +G GGT    ++L++ +
Sbjct: 235 AARACGLVSLEPTKVAEILKDRPSWYRDCRCV----DVLQIIPTGNGGT----IELIYMQ 286

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG-----APAFVNCRRLPSG 512
               + L   R+   LR+     +G   + + S+   + T G      P FV    LPSG
Sbjct: 287 TYAPTTLAAPRDFWILRYTSGLEDGSLVICERSL--TQATGGPSGPNTPNFVRAEVLPSG 344

Query: 513 CVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            +++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 345 YLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALR 394


>gi|147792360|emb|CAN65768.1| hypothetical protein VITISV_018803 [Vitis vinifera]
          Length = 868

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 38/175 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 74

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 75  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTSCES 134

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
               G   L  QH          L I    L + L +    A +++  P    GP
Sbjct: 135 VVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 189


>gi|242051699|ref|XP_002454995.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
 gi|241926970|gb|EES00115.1| hypothetical protein SORBIDRAFT_03g002660 [Sorghum bicolor]
          Length = 844

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++ +Q+K WFQNRR + K  
Sbjct: 16  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRDCPVLASVDPKQIKVWFQNRRCREK-- 73

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E+S L+  N KL A N
Sbjct: 74  -QRKESSRLQALNRKLTAMN 92



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W      M       +V+ +G     NG +
Sbjct: 203 HGCAGVAARACGLVGMEPAKVAEVLKDRLLWLRDCRSM----EVVNVLPAG----NNGTI 254

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ T +     P    F+    
Sbjct: 255 ELLYLQLYAPTTLAPARDFWLLRYTSILDDGSLVVCERSLSTKQGGPSMPLVQPFIRGEM 314

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 315 LPSGFLIRPSDGGGSVIHIVDHIDLEPWSVPEVVRPLYESSAMVAQKMSMAALR 368


>gi|449447807|ref|XP_004141659.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
 gi|449480641|ref|XP_004155954.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Cucumis
           sativus]
          Length = 837

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C        +V+ +  GGT    ++L++ +
Sbjct: 206 AARACGLVGLEPTRVAEILKDQPSWFR--DCRAVDV--LNVLPTANGGT----IELLYMQ 257

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + L P R+   LR+     +G   + + S+   +     P    FV    LPSG +
Sbjct: 258 LYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPPVQHFVRAEMLPSGYL 317

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           ++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 318 IRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTMAALRQ 366


>gi|359483940|ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera]
 gi|147820218|emb|CAN73584.1| hypothetical protein VITISV_033098 [Vitis vinifera]
 gi|297740817|emb|CBI30999.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 211 AARACGLVSLEPTKVAEILKDRPSWFRDCRCL----DVLSVIPTGNGGT----IELIYMQ 262

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-DTIRETSGAPA--FVNCRRLPSGCV 514
               + L   R+   LR+     +G   + + S+  +    +G PA  ++    LPSG +
Sbjct: 263 TYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPASSYIRAEMLPSGYL 322

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D   V ++ +PL  S      +  VA L+
Sbjct: 323 IRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAALR 370


>gi|24417147|dbj|BAC22512.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 836

 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 19  KYVRYTPEQVEALERLYHDCPKPSSHRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 76

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 77  --QRKEASRLQAVNRKLSAMN 95



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 12/176 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    ASR  G+V +    + E L D   W              DV++    GT N  +
Sbjct: 202 HGCTGVASRACGLVGLEPTRVAEILKDRPSWYR-------DCRAVDVLNVLTTGT-NRTI 253

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE---TSGAPAFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +        P FV  + 
Sbjct: 254 ELLYMQLYAPTTLAPARDFWLLRYTSALEDGSLVVCERSLNNTQNGPTMPPVPHFVRAKI 313

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQ 564
           LPSG +++    G S +  V+H +++   V ++ +PL  S     AQR      RQ
Sbjct: 314 LPSGYLIRPCDGGGSIIHIVDHVDFEAGSVPEVLRPLYESST-LLAQRTTLAAFRQ 368


>gi|56202112|dbj|BAD73204.1| putative homeobox leucine-zipper protein [Oryza sativa Japonica
           Group]
          Length = 886

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     ++ +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLV-RECPALANVDPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 63  --QRKESSRLQALNRKLTAMN 81


>gi|224056521|ref|XP_002298892.1| predicted protein [Populus trichocarpa]
 gi|60327627|gb|AAX19053.1| class III HD-Zip protein 4 [Populus trichocarpa]
 gi|222846150|gb|EEE83697.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 74  --QRKEASRLQTVNRKLTAMN 92



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 210 AARACGLVSLEPTKVAEILKDRPSWFRDCRCL----DILSVIPTGSGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
               + L   R+   LR+     +G   + + S+ +   ++G P      +F+    LPS
Sbjct: 262 TYAPTTLAAARDFWTLRYTTTLEDGSLVICERSLTS---STGGPTGPPPSSFIRAEMLPS 318

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++      S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 319 GYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALR 369


>gi|359483942|ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 22/190 (11%)

Query: 387 IGLKPN----GFVTE-------ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
           IG+KP     G V         A+R  G+V +    + E L D   W     C+      
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCL----DV 244

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSI-DTI 494
             VI +G GGT    ++L++ +    + L   R+   LR+     +G   + + S+  + 
Sbjct: 245 LSVIPTGNGGT----IELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTSST 300

Query: 495 RETSGAPA--FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGF 552
              +G PA  ++    LPSG +++    G S +  V+H + D   V ++ +PL  S    
Sbjct: 301 GGPTGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKIL 360

Query: 553 GAQRWVATLQ 562
             +  VA L+
Sbjct: 361 AQKTTVAALR 370


>gi|125569402|gb|EAZ10917.1| hypothetical protein OsJ_00759 [Oryza sativa Japonica Group]
          Length = 507

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     ++ +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERLYYECPKPSSLRRQQLV-RECPALANVDPKQIKVWFQNRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 63  --QRKESSRLQALNRKLTAMN 81


>gi|359483944|ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERVYSECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 28/193 (14%)

Query: 387 IGLKPN----GFVTE-------ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTAT 435
           IG+KP     G V         A+R  G+V +    + E L D   W     C+      
Sbjct: 189 IGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRPSWFRDCRCL----DV 244

Query: 436 TDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR 495
             VI +G GGT    ++L++ +    + L   R+   LR+     +G   + + S+ +  
Sbjct: 245 LSVIPTGNGGT----IELIYMQTYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTS-- 298

Query: 496 ETSGAP------AFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG 549
            ++G P      +++    LPSG +++    G S +  V+H + D   V ++ +PL  S 
Sbjct: 299 -STGGPTGPPASSYIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESS 357

Query: 550 MGFGAQRWVATLQ 562
                +  VA L+
Sbjct: 358 KILAQKTTVAALR 370


>gi|89514857|gb|ABD75303.1| class III homeodomain-leucine zipper protein C3HDZ2 [Psilotum
           nudum]
          Length = 819

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 17/99 (17%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----L 173
           DG  G  +DAA       +Y R+T +Q+  LESL+ ECP P   +R +L K  C     +
Sbjct: 8   DGKGG--IDAAG------KYVRYTTEQVDALESLYNECPKPSSLRRQQLIKE-CPILSNI 58

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           E +Q+K WFQNRR + K   +R E S L+  N KL A N
Sbjct: 59  EPKQIKVWFQNRRCREK---QRKEASRLQNVNAKLTAMN 94



 Score = 42.7 bits (99), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W      +    AT            NG +++++ +
Sbjct: 207 AARACGLVGLEPARVVEVLKDRPSWHRDCRQLATLYATNT--------NNNGKMEVLYMQ 258

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L P R+   LR+     +G + + + S++       AP   +FV     PSG +
Sbjct: 259 MYAPTTLAPARDFCTLRYTSLLEDGSYVICERSLNGTLGVPTAPPMQSFVRAEMHPSGYL 318

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++      S +  V+H + +   V ++ +PL
Sbjct: 319 IRPCEGSGSVIIIVDHMDLEPWTVPEVLRPL 349


>gi|359476025|ref|XP_002283717.2| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Vitis
           vinifera]
 gi|296081833|emb|CBI20838.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 38/175 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 76

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 77  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATLATTDTSCES 136

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
               G   L  QH          L I    L + L +    A +++  P    GP
Sbjct: 137 VVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 191



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W              +V+S+G GGT    +
Sbjct: 201 HGCTGVAARACGLVSLEPTRVAEILKDWPSWYRE----CRNVDVLNVLSTGNGGT----I 252

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV   +
Sbjct: 253 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVRAEK 312

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRQ 367


>gi|413957206|gb|AFW89855.1| rolled leaf1 [Zea mays]
          Length = 713

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 87

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 88  --QRKESSRLQAVNRKLTAMN 106



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +     +E L D   W     C      T     +G GGT    ++L++ +
Sbjct: 213 AARACGLVNLEPTKGIEILKDRPSWFR--DCRSLEVFTR--FPAGNGGT----IELIYMQ 264

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
           +   + LVP R+   LR+     +G   V + S+     + G P       FV    LPS
Sbjct: 265 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG---SGGGPNAASTQQFVRAEMLPS 321

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           G +V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 GYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 355


>gi|383212095|dbj|BAM08934.1| class III homeobox-leucine zipper protein [Asparagus officinalis]
          Length = 849

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 23  KYVRYTPEQVEALERVYSECPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 80

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 81  --QRKEASRLQTVNRKLTAMN 99



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W      +   T    VI +G GG     ++LM+ +
Sbjct: 215 AARACGLVSLEPTKVAEILKDRPSWYRDCRSLDVLT----VIPTGNGGN----IELMYMQ 266

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   + + S+     ++G PA      FV    LPS
Sbjct: 267 TYAPTTLASARDFWTLRYTTGLEDGSLVICERSLT---PSTGGPAGPPASGFVRAEMLPS 323

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  +A L 
Sbjct: 324 GYLIRPCEGGGSMIHIVDHMDLDAWSVPEVLRPLYESPKILAQKMTIAALH 374


>gi|326517046|dbj|BAJ96515.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 845

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC----LETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++ +Q+K WFQNRR + K  
Sbjct: 19  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLASVDPKQIKVWFQNRRCREK-- 76

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E+  L+  N KL A N
Sbjct: 77  -QRKESGRLQSLNRKLAAMN 95



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + + L D   W         R   +  I + +    NG +
Sbjct: 204 HGCAGVAARACGLVGMEPAKVADILKDRPLWL--------RDCRSMEIVNVLPAGSNGTI 255

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   +R+     +G   V + S+ + +     P    FV    
Sbjct: 256 ELLYMQLYAPTTLAPARDFWLMRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFVRGEM 315

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 316 LPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVVRPLYESSAMVAQKMSMAALR 369


>gi|413957205|gb|AFW89854.1| rolled leaf1 [Zea mays]
          Length = 709

 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 87

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 88  --QRKESSRLQAVNRKLTAMN 106



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +     +E L D   W     C      T     +G GGT    ++L++ +
Sbjct: 213 AARACGLVNLEPTKGIEILKDRPSW--FRDCRSLEVFTR--FPAGNGGT----IELIYMQ 264

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
           +   + LVP R+   LR+     +G   V + S+     + G P       FV    LPS
Sbjct: 265 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG---SGGGPNAASTQQFVRAEMLPS 321

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           G +V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 GYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 355


>gi|37694044|gb|AAQ98963.1| homeodomain leucine-zipper protein Hox9 [Oryza sativa Japonica
           Group]
          Length = 840

 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQL-LRDCPILANIEPKQIKVWFQNRRCRDK- 86

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 87  --QRKEASRLQAVNRKLTAMN 105



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 212 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V +           T+ A  FV    L SG +
Sbjct: 264 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLTSGYL 323

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 324 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 354


>gi|443894059|dbj|GAC71409.1| hypothetical protein PANT_3c00014 [Pseudozyma antarctica T-34]
          Length = 863

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           L AA  P  +K+ ++ TP+Q++ LE+ F++  +P  + RLELS++L +  R V+ WFQNR
Sbjct: 261 LSAAFRPRGRKKRNKCTPEQLRSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNR 320

Query: 186 RTQMKTQLERHE--NSLLRQENDKLRAENMS 214
           R ++KT   R +  +   R+++  LRA++ S
Sbjct: 321 RAKVKTIERRGDGGSDSGRKKSYSLRADDKS 351


>gi|115482560|ref|NP_001064873.1| Os10g0480200 [Oryza sativa Japonica Group]
 gi|75168160|sp|Q9AV49.1|HOX9_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
 gi|13384370|gb|AAK21338.1|AC024594_2 putative homeodomain-leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|31432701|gb|AAP54299.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|78708820|gb|ABB47795.1| rolled leaf1, putative, expressed [Oryza sativa Japonica Group]
 gi|113639482|dbj|BAF26787.1| Os10g0480200 [Oryza sativa Japonica Group]
          Length = 840

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQL-LRDCPILANIEPKQIKVWFQNRRCRDK- 86

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 87  --QRKEASRLQAVNRKLTAMN 105



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 22/177 (12%)

Query: 383 FTPCIGLKP-----------NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIA 431
           + P  G+KP           +G    A+R  G+V +    +VE L D   W     C   
Sbjct: 186 WVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFR--DCRSL 243

Query: 432 RTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVD--- 488
              T  +  +G GGT    ++L++ ++   + LVP R+   LR+     +G   V +   
Sbjct: 244 EVFT--MFPAGNGGT----IELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSL 297

Query: 489 VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
                   T+ A  FV    LPSG +V+    G S V  V+H + +   V ++ +PL
Sbjct: 298 SGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 354


>gi|297798676|ref|XP_002867222.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
 gi|297313058|gb|EFH43481.1| ATHB-8 [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 14  KYVRYTPEQVEALERLYNDCPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 71

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 72  --QRKEASRLQAVNRKLTAMN 90



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 417 MDPNRWAEMF---PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           +DP R AE+    PC +    + D+++  +     G L+L++ +L   + L P R+   L
Sbjct: 213 LDPTRVAEILKDKPCWLRDCRSLDIVNV-LSTANGGTLELIYMQLYAPTTLAPARDFWML 271

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           R+     +G   + + S++  +       +P FV    LPSG +++    G S +  V+H
Sbjct: 272 RYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDH 331

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            + +   V ++ + L  S      +  +A L+
Sbjct: 332 FDLEPWSVPEVLRSLYESSTLLAQRTTMAALR 363


>gi|147790308|emb|CAN61201.1| hypothetical protein VITISV_009744 [Vitis vinifera]
          Length = 839

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 38/175 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 7   KYVRYTPEQVEALERLYHDCPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 65

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 66  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTQNATLATTDTSCES 125

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
               G   L  QH          L I    L + L +    A +++  P    GP
Sbjct: 126 VVTSGQHHLTPQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 180



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W              +V+S+G GGT    +
Sbjct: 190 HGCTGVAARACGLVSLEPTRVAEILKDWPSWYRE----CRNVDVLNVLSTGNGGT----I 241

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +     P    FV   +
Sbjct: 242 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQYFVRAEK 301

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 302 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLLAQKTTMAALRQ 356


>gi|302772080|ref|XP_002969458.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
 gi|110349516|gb|ABG73233.1| class III HD-Zip protein HDZ31 [Selaginella moellendorffii]
 gi|300162934|gb|EFJ29546.1| hypothetical protein SELMODRAFT_146209 [Selaginella moellendorffii]
          Length = 855

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +E RQ+K WFQNRR + K  
Sbjct: 18  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREK-- 75

Query: 193 LERHENSLLRQENDKLRAENMSI 215
            +R E S L+  N  L A N  I
Sbjct: 76  -QRKETSRLQSVNASLTAMNKII 97



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 17/173 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D + W  +  C   R        +  GGT    ++L++ +
Sbjct: 235 AARAWGLVGLEPDKVAEILKDRSSW--LRDCR--RLEVLRAFPTPNGGT----VELVYTQ 286

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L   R+   LR+     EG   V + S+  +     A A   FV    L SG +
Sbjct: 287 MYAPTTLAAARDFWTLRYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFL 346

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG------MGFGAQRWVATL 561
           ++        +  V+H + +  +VH++ +PL  S       M  GA R++  L
Sbjct: 347 IRPFEGNVCSIYIVDHMDLESWKVHEVLRPLYESSSVLAQRMTLGALRFLRRL 399


>gi|187609457|sp|A2Z8L4.2|HOX9_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX9; AltName:
           Full=HD-ZIP protein HOX9; AltName: Full=Homeodomain
           transcription factor HOX9; AltName: Full=OsHB2; AltName:
           Full=OsHox9
          Length = 840

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYAECPKPSSSRRQQL-LRDCPILANIEPKQIKVWFQNRRCRDK- 86

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 87  --QRKEASRLQAVNRKLTAMN 105



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 212 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V +           T+ A  FV    LPSG +
Sbjct: 264 MYAPTTLVPARDFWTLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYL 323

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 324 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 354


>gi|414864313|tpg|DAA42870.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           1 [Zea mays]
 gi|414864314|tpg|DAA42871.1| TPA: putative homeobox/lipid-binding domain family protein isoform
           2 [Zea mays]
          Length = 840

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQAVNRKLTAMN 103



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    ++E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVIEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR---ETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+         + A  FV    LPSG +
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|357126820|ref|XP_003565085.1| PREDICTED: homeobox-leucine zipper protein HOX29-like isoform 2
           [Brachypodium distachyon]
          Length = 872

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE L+ ECP P   +R +L +       ++ +Q+K WFQNRR + K  
Sbjct: 15  KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECAVLAAVDPKQIKVWFQNRRCREK-- 72

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E+  L+  N KL A N
Sbjct: 73  -QRRESGRLQSLNRKLTAMN 91



 Score = 45.4 bits (106), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 17/182 (9%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W      M       +V+ +G     NG +
Sbjct: 233 HGCAGVAARACGLVGMEPAKVAEILKDRPLWLRDCRSM----EVVNVLPAG----SNGTI 284

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    F+    
Sbjct: 285 ELLYMQLYAQTTLAPARDFWLLRYTSILDDGSLVVCERSLSSKQGGPSMPLVQPFIRGEM 344

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL------IISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL      +   M   A R++  L 
Sbjct: 345 LPSGFLIRPSDGGGSVIHIVDHLDLEPRSVPEVVRPLYESSAIVAQKMSMAALRYLRQLA 404

Query: 563 RQ 564
            +
Sbjct: 405 HE 406


>gi|270271303|gb|ACZ67180.1| transcription factor HEX, partial [Populus nigra]
          Length = 64

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
            Q +R +N +LR EN+ L+ +N  ++  +R+ IC NCGG A++G I  EE  LR+ENARL
Sbjct: 1   AQQDRSDNLILRAENESLKNDNYRLQAELRSLICPNCGGQAMLGAIPFEE--LRLENARL 58

Query: 251 KDELDR 256
           +DEL+R
Sbjct: 59  RDELER 64


>gi|356526089|ref|XP_003531652.1| PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Glycine
           max]
          Length = 838

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 75  --QRKESSRLQAVNRKLTAMN 93



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEILKDRPLWFR--DCRAVDV--LNVLPTANGGT----I 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   + + S+   +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 312 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALR 365


>gi|302755606|ref|XP_002961227.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
 gi|300172166|gb|EFJ38766.1| hypothetical protein SELMODRAFT_270225 [Selaginella moellendorffii]
          Length = 855

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 7/83 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL----CLETRQVKFWFQNRRTQMKTQ 192
           +Y R+TP+Q++ LE ++ ECP P   +R +L +       +E RQ+K WFQNRR + K  
Sbjct: 18  KYIRYTPEQVEALERVYNECPKPSSIRRQQLLREYPVLANIEPRQIKVWFQNRRCREK-- 75

Query: 193 LERHENSLLRQENDKLRAENMSI 215
            +R E S L+  N  L A N  I
Sbjct: 76  -QRKETSRLQSVNASLTAMNKII 97



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 17/173 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D + W  +  C   R        +  GGT    ++L++ +
Sbjct: 235 AARAWGLVGLEPDKVAEILKDRSSW--LRDCR--RLEVLRAFPTPNGGT----VELVYTQ 286

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L   R+   LR+     EG   V + S+  +     A A   FV    L SG +
Sbjct: 287 MYAPTTLAAARDFWTLRYTTFLDEGDLVVCEKSLSGVHGLPAAKAGNDFVRAEMLASGFL 346

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG------MGFGAQRWVATL 561
           ++        +  V+H + +  +VH++ +PL  S       M  GA R++  L
Sbjct: 347 IRPFEGNVCSIYIVDHMDLESWKVHEVLRPLYESSSVLAQRMTLGALRFLRRL 399


>gi|242042549|ref|XP_002468669.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
 gi|241922523|gb|EER95667.1| hypothetical protein SORBIDRAFT_01g050000 [Sorghum bicolor]
          Length = 840

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQAVNRKLTAMN 103



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    ++E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVIEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----VELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR---ETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+         + A  FV    LPSG +
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPNAASAQQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|223975951|gb|ACN32163.1| unknown [Zea mays]
 gi|413957207|gb|AFW89856.1| rolled leaf1 isoform 1 [Zea mays]
 gi|413957208|gb|AFW89857.1| rolled leaf1 isoform 2 [Zea mays]
          Length = 842

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 87

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 88  --QRKESSRLQAVNRKLTAMN 106



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +     +E L D   W     C      T     +G GGT    ++L++ +
Sbjct: 213 AARACGLVNLEPTKGIEILKDRPSWFR--DCRSLEVFTR--FPAGNGGT----IELIYMQ 264

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
           +   + LVP R+   LR+     +G   V + S+     + G P       FV    LPS
Sbjct: 265 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG---SGGGPNAASTQQFVRAEMLPS 321

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           G +V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 GYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 355


>gi|222613019|gb|EEE51151.1| hypothetical protein OsJ_31913 [Oryza sativa Japonica Group]
          Length = 816

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERVYAECPKPSSSRRQQL-LRDCPILANIEPKQIKVWFQNRRCRDK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 188 AARACGLVNLEPTKIVEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 239

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V +           T+ A  FV    LPSG +
Sbjct: 240 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYL 299

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 300 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 330


>gi|162462024|ref|NP_001105533.1| rolled leaf1 [Zea mays]
 gi|40950648|gb|AAR97952.1| rolled leaf1 [Zea mays]
          Length = 840

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQAVNRKLTAMN 103



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +     +E L D   W     C      T     +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKGIEILKDRPSWFR--DCRSLEVFTR--FPAGNGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
           +   + LVP R+   LR+     +G   V + S+     + G P       FV    LPS
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG---SGGGPNAASTQQFVRAEMLPS 318

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           G +V+    G S V  V+H + +   V ++ +PL
Sbjct: 319 GYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|15233969|ref|NP_195014.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
 gi|75220729|sp|Q39123.1|ATHB8_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-8; AltName:
           Full=HD-ZIP protein ATHB-8; AltName: Full=Homeodomain
           transcription factor ATHB-8
 gi|1149569|emb|CAA90703.1| HD-zip [Arabidopsis thaliana]
 gi|7270235|emb|CAB80005.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|20152536|emb|CAD29660.1| homeodomain-leucine zipper protein 8 [Arabidopsis thaliana]
 gi|20466330|gb|AAM20482.1| HD-zip transcription factor (athb-8) [Arabidopsis thaliana]
 gi|31711762|gb|AAP68237.1| At4g32880 [Arabidopsis thaliana]
 gi|332660738|gb|AEE86138.1| homeobox-leucine zipper protein ATHB-8 [Arabidopsis thaliana]
          Length = 833

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 15  KYVRYTPEQVEALERLYNDCPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 72

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 73  --QRKEASRLQAVNRKLTAMN 91



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 7/152 (4%)

Query: 417 MDPNRWAEMF---PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           +DP R AE+    PC +    + D+++  +     G L+L++ +L   + L P R+   L
Sbjct: 214 LDPTRVAEILKDKPCWLRDCRSLDIVNV-LSTANGGTLELIYMQLYAPTTLAPARDFWML 272

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           R+     +G   + + S++  +       +P FV    LPSG +++    G S +  V+H
Sbjct: 273 RYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGGSILHIVDH 332

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            + +   V ++ + L  S      +  +A L+
Sbjct: 333 FDLEPWSVPEVLRSLYESSTLLAQRTTMAALR 364


>gi|59709573|gb|AAW88440.1| CORONA [Arabidopsis thaliana]
          Length = 836

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E + D   W              +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRE----CRAVDVMNVLPTANGGT----V 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           L SG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQ 366


>gi|15218158|ref|NP_175627.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName:
           Full=HD-ZIP protein ATHB-15; AltName: Full=Homeodomain
           transcription factor ATHB-15; AltName: Full=Protein
           CORONA; AltName: Full=Protein INCURVATA 4
 gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from
           Arabidopsis thaliana containing Homeobox PF|00046 and
           bZIP PF|00170 domains [Arabidopsis thaliana]
 gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]
 gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|332194639|gb|AEE32760.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 836

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E + D   W     C        +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFR--ECRAVEV--MNVLPTANGGT----V 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           L SG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQ 366


>gi|145324911|ref|NP_001077702.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194641|gb|AEE32762.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 794

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E + D   W     C        +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSW--FRECRAVEV--MNVLPTANGGT----V 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           L SG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQ 366


>gi|30695149|ref|NP_849795.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
 gi|332194640|gb|AEE32761.1| homeobox-leucine zipper protein ATHB-15 [Arabidopsis thaliana]
          Length = 837

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLTAMN 93



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E + D   W     C        +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEIVKDRPSWFR--ECRAVEV--MNVLPTANGGT----V 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S+ + +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           L SG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQ 366


>gi|297826941|ref|XP_002881353.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327192|gb|EFH57612.1| hypothetical protein ARALYDRAFT_902559 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 859

 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 29/126 (23%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 32  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 89

Query: 192 QLERHENSLLRQENDKLRAEN---MSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
             +R E + L+  N KL A N   M   D ++  +                  HL  EN 
Sbjct: 90  --QRKEAARLQTVNRKLNAMNKLLMEENDRLQKQV-----------------SHLVYENG 130

Query: 249 RLKDEL 254
            +K +L
Sbjct: 131 HMKQQL 136



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C+     T  VI +G GGT    ++L++ +
Sbjct: 226 AARACGLVSLEPMKVAEILKDRPSWLRDCRCV----DTLSVIPAGNGGT----IELIYTQ 277

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRRLPSGCV 514
           +   + L   R+   LR+     +G + V + SI +       P   +FV     PSG +
Sbjct: 278 MYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSITSATGGPTGPPSSSFVRAEMRPSGFL 337

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D   V ++ +PL  S      +  VA L+
Sbjct: 338 IRPCEGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALR 385


>gi|413957204|gb|AFW89853.1| rolled leaf1 [Zea mays]
          Length = 528

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 30  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 87

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 88  --QRKESSRLQAVNRKLTAMN 106



 Score = 43.1 bits (100), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +     +E L D   W     C      T     +G GGT    ++L++ +
Sbjct: 213 AARACGLVNLEPTKGIEILKDRPSWFR--DCRSLEVFTR--FPAGNGGT----IELIYMQ 264

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP------AFVNCRRLPS 511
           +   + LVP R+   LR+     +G   V + S+     + G P       FV    LPS
Sbjct: 265 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSG---SGGGPNAASTQQFVRAEMLPS 321

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           G +V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 GYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 355


>gi|15226808|ref|NP_181018.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
 gi|75096986|sp|O04291.1|ATB14_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-14; AltName:
           Full=HD-ZIP protein ATHB-14; AltName: Full=Homeodomain
           transcription factor ATHB-14; AltName: Full=Protein
           PHABULOSA
 gi|2145356|emb|CAA72007.1| HD-Zip protein [Arabidopsis thaliana]
 gi|3132474|gb|AAC16263.1| homeodomain transcription factor (ATHB-14) [Arabidopsis thaliana]
 gi|20152534|emb|CAD29659.1| homeodomain-leucine zipper protein 14 [Arabidopsis thaliana]
 gi|20466650|gb|AAM20642.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|23198254|gb|AAN15654.1| homeodomain transcription factor [Arabidopsis thaliana]
 gi|330253918|gb|AEC09012.1| homeobox-leucine zipper protein ATHB-14 [Arabidopsis thaliana]
          Length = 852

 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E + L+  N KL A N
Sbjct: 83  --QRKEAARLQTVNRKLNAMN 101



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 17/171 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W  +  C      T  VI +G GGT    ++L++ +
Sbjct: 219 AARACGLVSLEPMKVAEILKDRPSW--LRDCR--SVDTLSVIPAGNGGT----IELIYTQ 270

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
           +   + L   R+   LR+     +G + V + S+ +    +G P       FV     PS
Sbjct: 271 MYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTS---ATGGPTGPPSSNFVRAEMKPS 327

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           G +++    G S +  V+H + D   V ++ +PL  S      +  VA L+
Sbjct: 328 GFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALR 378


>gi|317160486|gb|ADV04325.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 851

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL----ETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q+Q LE  + ECP P+  +R +L +   L    E +Q+K WFQNRR + K  
Sbjct: 17  KYVRYTEEQVQALEKFYSECPKPNAFRRQQLIRECPLLSNIEPKQIKVWFQNRRCREK-- 74

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E + L   N+KL+A N
Sbjct: 75  -QRKEATRLLALNEKLKAMN 93


>gi|206572105|gb|ACI13685.1| putative HB15 HD-ZipIII [Malus x domestica]
          Length = 838

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQAVNRKLSAMN 93



 Score = 42.4 bits (98), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W  +  C        +V+ +  GGT    +
Sbjct: 200 HGCTGVAARACGLVGLEPTRVAEILKDLPSW--LRDCRAVDV--LNVLPTANGGT----I 251

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P  +   LR+     +G   V   S+   +     P    FV    
Sbjct: 252 ELLYMQLYAPTTLAPACDFWLLRYTSVLEDGSLVVCARSLKNTQNGPTMPPVQHFVRAEM 311

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 312 LPSGYLIRPCEGGGSIIHIVDHMDLEPCSVPEVLRPLYESSAVLAQKMTMAALRQ 366


>gi|125532383|gb|EAY78948.1| hypothetical protein OsI_34053 [Oryza sativa Indica Group]
          Length = 799

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 5   KYVRYTPEQVEALERVYAECPKPSSSRRQQL-LRDCPILANIEPKQIKVWFQNRRCRDK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)

Query: 412 LVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVN 471
           +VE L D   W     C      T  +  +G GGT    ++L++ ++   + LVP R+  
Sbjct: 185 IVEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQMYAPTTLVPARDFW 236

Query: 472 FLRFCKQHAEGVWAVVD---VSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWV 528
            LR+     +G   V +           T+ A  FV    LPSG +V+    G S V  V
Sbjct: 237 TLRYTTTMDDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIV 296

Query: 529 EHAEYDESQVHQLYKPL 545
           +H + +   V ++ +PL
Sbjct: 297 DHLDLEAWSVPEVLRPL 313


>gi|255564395|ref|XP_002523194.1| conserved hypothetical protein [Ricinus communis]
 gi|223537601|gb|EEF39225.1| conserved hypothetical protein [Ricinus communis]
          Length = 771

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 23  KYVRYTPEQVEALERVYTECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 80

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 81  --QRKEASRLQTVNRKLTAMN 99



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+     T  VI +G GGT    ++L++ +
Sbjct: 217 AARACGLVSLEPTKVAEILKDRPSWFRDCRCL----DTLSVIPTGNGGT----IELIYMQ 268

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRRLPSGCV 514
               + L   RE   LR+     +G   + + S+ T         A +FV    LPSG +
Sbjct: 269 TYAPTTLAAAREFWTLRYTTTLEDGSLVICERSLTTTTGGPTGPPASSFVRAEMLPSGYL 328

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D   V ++ +PL  S      +  +A L+
Sbjct: 329 IRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAALR 376


>gi|414864315|tpg|DAA42872.1| TPA: putative homeobox/lipid-binding domain family protein, partial
           [Zea mays]
          Length = 917

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQAVNRKLTAMN 103



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    ++E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVIEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+         + A  FV    LPSG +
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|414864316|tpg|DAA42873.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 602

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQAVNRKLTAMN 103



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    ++E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVIEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+         + A  FV    LPSG +
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|209171581|gb|ACI42911.1| tendril-less [Pisum sativum]
 gi|209171583|gb|ACI42912.1| tendril-less [Pisum sativum]
          Length = 237

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 49/79 (62%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  Q+  LE  F E    D +++++LS  L L+ RQV  WFQNRRT+ KT+   H   +L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEHSYDVL 137

Query: 202 RQENDKLRAENMSIRDAMR 220
           +QEN KL+ E M +++ ++
Sbjct: 138 KQENQKLQEEVMVLKEKLK 156


>gi|255549852|ref|XP_002515977.1| DNA binding protein, putative [Ricinus communis]
 gi|223544882|gb|EEF46397.1| DNA binding protein, putative [Ricinus communis]
          Length = 839

 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 38/175 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +   R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHECPKPSSIRRQQF-IRECPILSNIEPKQIKVWFQNRRCREKQ 76

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPIC----TNCGG 229
           + E              N LL +END+L+        EN   R   +N       T+C  
Sbjct: 77  RKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTSCDS 136

Query: 230 PAIIGDISLEEQH----------LRIENARLKDELDRVCALAGKFLGRPVSSMGP 274
               G   L  QH          L I    L + L +    A +++  P    GP
Sbjct: 137 VVTSGQHHLTPQHQPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGP 191



 Score = 45.8 bits (107), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 11/175 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W     C        +V+ +  GGT    +
Sbjct: 201 HGCTGVAARACGLVGLEPTRVAEILKDRPSWFR--DCRAVDV--LNVLPTANGGT----I 252

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRR 508
           +L++ +L   + L P R+   LR+     +G   + + S+   +     P    FV    
Sbjct: 253 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPSMPPVQHFVRAEM 312

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L++
Sbjct: 313 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 367


>gi|45479746|gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTPEQVEALERVYAECPKPTSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L   N KL A N
Sbjct: 74  --QRKEASRLTTVNRKLSAMN 92



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+        VI +G GGT    ++L++ +
Sbjct: 209 AARACGLVSLEPTKVAEILKDRPSWYRDCRCL----NILSVIPTGNGGT----IELIYLQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE-TSGAPA--FVNCRRLPSGCV 514
               + L   R+   LR+     +G   + + S+ T     +G PA  FV    LPSG +
Sbjct: 261 TYAPTTLASARDFWTLRYTTSLEDGSLVICERSLTTATGGPTGPPATSFVRAEMLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + D   V ++ +PL  S      +  VA L+
Sbjct: 321 IRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKTTVAALR 368


>gi|270271301|gb|ACZ67179.1| transcription factor HEX [Populus balsamifera]
          Length = 64

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARL 250
            Q +R +N +LR EN+ L+ +N  ++  +R  IC NCGG A++G I  EE  LR+ENARL
Sbjct: 1   AQQDRSDNLILRAENESLKNDNYRLQAELRXLICPNCGGQAMLGAIPFEE--LRLENARL 58

Query: 251 KDELDR 256
           +DEL+R
Sbjct: 59  RDELER 64


>gi|357466691|ref|XP_003603630.1| Class III HD-Zip protein [Medicago truncatula]
 gi|355492678|gb|AES73881.1| Class III HD-Zip protein [Medicago truncatula]
          Length = 834

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 17/91 (18%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 19  KYVRYTPEQVEALERLYHECPKPTSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREKQ 77

Query: 192 QLERHE-----------NSLLRQENDKLRAE 211
           + E              N LL +END+L+ +
Sbjct: 78  RKEAGRLQAVNRKLTAMNKLLMEENDRLQKQ 108



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 13/169 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTA-TTDVISSGMGGTRNGALQLMHA 456
           A+R  G+V +    + E L D   W         RT    +V+S+G GGT    ++L++ 
Sbjct: 204 AARACGLVGLEPARVAEILKDRLSWYR-----DCRTVDVLNVMSTGNGGT----IELLYM 254

Query: 457 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRRLPSGC 513
           +L   + L P R+   LR+     +G   V + S++  +        P FV    LPSG 
Sbjct: 255 QLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVPHFVRAEVLPSGY 314

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           +++    G S +  V+H   +   V ++ +PL  S M    +  +A L+
Sbjct: 315 LIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALR 363


>gi|255558238|ref|XP_002520146.1| homeobox protein, putative [Ricinus communis]
 gi|223540638|gb|EEF42201.1| homeobox protein, putative [Ricinus communis]
          Length = 305

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 26/138 (18%)

Query: 106 LLEHESRSGSDNMDG---------ASGD-DLDAADNPPRKKRYHRHTPQQIQELESLFKE 155
           ++  E   G D MD           +GD D D   NPP KKR  R T  Q+Q LE  F+ 
Sbjct: 43  MVNFEDVGGEDTMDAPFFQPLVKEENGDEDYDVFLNPPAKKR--RLTATQVQFLERNFEV 100

Query: 156 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL-------------L 201
               + +++++L+K L L+ RQV  WFQNRR + K  QLE+  +SL             L
Sbjct: 101 ENKLEPERKIQLAKELGLQPRQVAIWFQNRRARFKNKQLEKDYDSLKASYDKLKADYDNL 160

Query: 202 RQENDKLRAENMSIRDAM 219
            +EN+ L+ E +S++D +
Sbjct: 161 LKENENLKNEFVSLKDKL 178


>gi|224059140|ref|XP_002299735.1| predicted protein [Populus trichocarpa]
 gi|60327629|gb|AAX19054.1| class III HD-Zip protein 5 [Populus trichocarpa]
 gi|222846993|gb|EEE84540.1| predicted protein [Populus trichocarpa]
          Length = 851

 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 75

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 76  --QRKEASRLQAVNRKLTAMN 94



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 417 MDPNRWAEMF---PCMIARTATTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFL 473
           ++P R AE+    P         DV++  +     G ++L++ +L   + L P R+   L
Sbjct: 216 LEPTRVAEILKDRPSWFRDCRAVDVLNV-LPTANGGTIELLYMQLYAPTTLAPGRDFWLL 274

Query: 474 RFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCVVQDMPNGYSKVTWVEH 530
           R+     +G   V + S+   +     P    FV    LPSG +V+    G S +  V+H
Sbjct: 275 RYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEMLPSGYLVRPCEGGGSIIHIVDH 334

Query: 531 AEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
            + +   V ++ +PL  S      +  +A L++
Sbjct: 335 MDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQ 367


>gi|219879370|gb|ACL51017.1| class III HD-Zip protein 8 [Citrus trifoliata]
          Length = 829

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQ+RR + K 
Sbjct: 5   KYVRYTPEQVEALERLYHECPKPSSMRRQQL-IRECPILSNIEPKQIKVWFQDRRCREK- 62

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 63  --QRKEASRLQAVNRKLTAMN 81



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V ++   + E L D   W     C        +V+ +G  GT    +
Sbjct: 193 HGCTGVAARACGLVGLDPTRVAEILKDRPSWYR--DCR--SVEVVNVLPTGSSGT----I 244

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR---ETSGAPAFVNCRR 508
           +L++ +L   + L P R+   LR+     +G   V + S++  +       AP FV    
Sbjct: 245 ELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPQAPHFVRAEM 304

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           LPSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+
Sbjct: 305 LPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLIAQKTTMAALR 358


>gi|402575788|gb|AFQ69084.1| HB8, partial [Pisum sativum]
          Length = 550

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 17/91 (18%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 19  KYVRYTPEQVEALERLYHECPKPTSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREKQ 77

Query: 192 QLERHE-----------NSLLRQENDKLRAE 211
           + E              N LL +END+L+ +
Sbjct: 78  RKEAGRLQAVNRKLTAMNKLLMEENDRLQKQ 108



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTA-TTDVISSGMGGTRNGALQLMHA 456
           A+R  G+V +    + E L D   W         RT    +V+S+G GGT    ++L++ 
Sbjct: 203 AARACGLVGLEPARVAEILKDRLAWYR-----DCRTVDVLNVMSTGNGGT----IELLYM 253

Query: 457 ELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSG---APAFVNCRRLPSGC 513
           +L   + L P R+   LR+     +G   V + S++ I+        P FV    LPSG 
Sbjct: 254 QLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNIQNGPSMPPVPHFVRADVLPSGY 313

Query: 514 VVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           +++    G S +  V+H   +   V ++ +PL  S M    +  +A L+
Sbjct: 314 LIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALR 362


>gi|449488526|ref|XP_004158070.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 9/91 (9%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFW 181
           D+ +      +Y R+TP+Q+  LE ++ ECP P   +R +L  R C     +E +Q+K W
Sbjct: 8   DSLNKQMDTSKYVRYTPEQVDALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVW 66

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
           FQNRR + K   +R E S L+  N KL A N
Sbjct: 67  FQNRRCREK---QRKEASRLQTVNRKLTAMN 94


>gi|449435534|ref|XP_004135550.1| PREDICTED: homeobox-leucine zipper protein HOX32-like [Cucumis
           sativus]
          Length = 844

 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q+  LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVDALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 75

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 76  --QRKEASRLQTVNRKLTAMN 94


>gi|402217195|gb|EJT97276.1| hypothetical protein DACRYDRAFT_25093 [Dacryopinax sp. DJM-731 SS1]
          Length = 569

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 40/61 (65%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           + R HR TP+Q Q L  ++     P  ++RL+L++RL ++ RQV+ WFQNRR Q K ++ 
Sbjct: 331 RARRHRTTPRQFQALTQVYNRTAFPSTQERLQLAERLGMQPRQVQIWFQNRRQQDKNRVS 390

Query: 195 R 195
           R
Sbjct: 391 R 391


>gi|357448593|ref|XP_003594572.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
 gi|355483620|gb|AES64823.1| Homeobox-leucine zipper protein ROC8 [Medicago truncatula]
          Length = 157

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 12/120 (10%)

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
           + RH+P Q   LE +F    +P  +Q+ E++K L LE +QV +WF  +R Q+K   ++  
Sbjct: 22  FPRHSPAQRLRLEEIFLTVKYPTHEQKNEIAKELDLEPKQVNWWFTYKRAQVKNATQKEV 81

Query: 198 NSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRV 257
           N+ LR E + L    + + +  +N  C  C    +        + LR+EN  LK++L ++
Sbjct: 82  NAALRAEKEIL----LEMMERQKNVFCQACRDSRL--------KQLRLENELLKEKLSKL 129


>gi|162459714|ref|NP_001105994.1| rolled leaf 2 [Zea mays]
 gi|82754245|gb|ABB89930.1| rolled leaf 2 [Zea mays]
          Length = 840

 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTPEQVEVLERLYIDCPKPSSSRRQQL-LRECPILSNIEPKQIKVWFQNRRCRDK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N +L A N
Sbjct: 85  --QRKESSRLQAVNRRLTAMN 103



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    ++E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVNLEPTKVIEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELIYMQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIR---ETSGAPAFVNCRRLPSGCV 514
           +   + LVP R+   LR+     +G   V + S+         + A  FV    LPSG +
Sbjct: 262 MYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLTGSGGGPNAASAQQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           V+    G S V  V+H + +   V ++ +PL
Sbjct: 322 VRPCEGGGSIVHIVDHLDLEAWSVPEVLRPL 352


>gi|357448587|ref|XP_003594569.1| Homeodomain protein (HB2) [Medicago truncatula]
 gi|355483617|gb|AES64820.1| Homeodomain protein (HB2) [Medicago truncatula]
          Length = 335

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 507 RRLPSGCVVQDMPNGYSKVTWVEHAEYD-ESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           ++ PSGC++Q +    SKV+W+EH E D + Q H +Y+ ++ + + FGA+RW+  L+R
Sbjct: 17  KKFPSGCLIQQISTETSKVSWIEHVEVDLKIQTHSMYRDIVNNAIAFGAERWLMELRR 74


>gi|209171585|gb|ACI42913.1| tendril-less [Lathyrus odoratus]
          Length = 237

 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  Q+  LE  F E    + +++++LS  L L+ RQV  WFQNRRT+ KT+   H   +L
Sbjct: 78  TSNQVDALERSFHEEIKLEPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEHSYDVL 137

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLE 239
           +QEN KL+ E M +++ ++     + G     GD ++E
Sbjct: 138 KQENQKLQEEVMELKEKLKE---KSDGRTQTFGDETVE 172


>gi|313220739|emb|CBY31581.1| unnamed protein product [Oikopleura dioica]
          Length = 416

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 124 DDLDAADNPP--RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           DD++ A  P   RKKR   +T  QIQELE+ F+       +QR E+S+RL L  RQVK W
Sbjct: 233 DDMEDAGTPRVGRKKR-RPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIW 291

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           FQNRR + K   +R  +   R  +    AE M
Sbjct: 292 FQNRRMKEKRLRQRGHSPRTRDRHQMDAAEQM 323


>gi|293336846|ref|NP_001169496.1| uncharacterized protein LOC100383369 [Zea mays]
 gi|224029677|gb|ACN33914.1| unknown [Zea mays]
          Length = 339

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 16/107 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 72  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 129

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICT 225
           QLER  + L             L Q+N +LR++ +S+ + +R    T
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLTEKLREKEAT 176


>gi|224165518|ref|XP_002338824.1| predicted protein [Populus trichocarpa]
 gi|222873518|gb|EEF10649.1| predicted protein [Populus trichocarpa]
          Length = 142

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 18  KYVRYTPEQVEALERLYHDCPKPSSIRRQQLI-RECPILSNIEPKQIKVWFQNRRCREK- 75

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 76  --QRKEASRLQAVNRKLTAMN 94


>gi|343425808|emb|CBQ69341.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 1016

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 5/91 (5%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           L AA  P  +K+ ++ TP Q++ LE+ F++  +P  + RLELS++L +  R V+ WFQNR
Sbjct: 232 LSAAFRPRGRKKRNKCTPDQLRSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNR 291

Query: 186 RTQMKTQLERHENSLLRQENDKLRAENMSIR 216
           R ++KT +ER  ++     +D  R ++ SIR
Sbjct: 292 RAKVKT-VERRGDA----GSDSGRKKSCSIR 317


>gi|18076740|emb|CAC84277.1| HD-Zip protein [Zinnia violacea]
          Length = 849

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTTEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 86

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 87  --QRKESSRLQTVNKKLSAMN 105



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 212 AARACGLVSLEPTKIVEILKDRPSWFR--DCRNLEVFT--MFPAGNGGT----IELVYTQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+         + A  FV    LPSG +
Sbjct: 264 IFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEMLPSGYL 323

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S V  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 324 IRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 371


>gi|209171591|gb|ACI42916.1| tendril-less [Vicia sativa]
          Length = 237

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  Q+  LE  F E    D +++++LS  L L+ RQV  WFQNRRT+ KT+    +  +L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEQDYDVL 137

Query: 202 RQENDKLRAENMSIRDAMR 220
           +QEN KL+ E M++++ ++
Sbjct: 138 KQENQKLQDEVMTLKEKLK 156


>gi|413923850|gb|AFW63782.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 339

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 16/107 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 72  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 129

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICT 225
           QLER  + L             L Q+N +LR++ +S+ + +R    T
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLTEKLREKEAT 176


>gi|18076736|emb|CAC84906.1| HD-Zip protein [Zinnia violacea]
          Length = 835

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 16  KYVRYTTEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 73

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 74  --QRKESSRLQTVNKKLSAMN 92



 Score = 40.0 bits (92), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 19/172 (11%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 199 AARACGLVSLEPTKIVEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 250

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA---PA----FVNCRRLP 510
               + L P R+   LR+      G   V + S+      SGA   PA    FV    LP
Sbjct: 251 TFAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSG----SGAGPNPAAVAQFVRGEMLP 306

Query: 511 SGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           SG +++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 307 SGYLIRPCEGGGSVIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 358


>gi|357453943|ref|XP_003597252.1| Homeobox leucine-zipper protein [Medicago truncatula]
 gi|355486300|gb|AES67503.1| Homeobox leucine-zipper protein [Medicago truncatula]
          Length = 839

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +QI+ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 23  KYVRYTAEQIEALEKVYVECPKPSSLRRQQL-IRECPVLANIEPKQIKVWFQNRRCREK- 80

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 81  --QRKEASQLQSVNRKLSAMN 99


>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
 gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
 gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
          Length = 220

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ KL        D  +NP+  +   
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--------DGRKNPVAGSKYL 198

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 199 GPSLKG 204


>gi|140052423|gb|ABE80119.2| Homeodomain-related [Medicago truncatula]
          Length = 142

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  +KKR    T +Q++ LES F+E    D +++++LSK L L+ RQ+  WFQNRR + K
Sbjct: 56  NQEKKKRL---TSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWK 112

Query: 191 TQLERHENSLLRQENDKLRAENMSIRDAMR 220
           T+   H    LR + + +  E   ++D +R
Sbjct: 113 TKQLEHLYDSLRHQFEVVSKEKQQLQDEVR 142


>gi|115448457|ref|NP_001048008.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|75132062|sp|Q6YWR4.1|HOX16_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|46390454|dbj|BAD15915.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|46390850|dbj|BAD16354.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113537539|dbj|BAF09922.1| Os02g0729700 [Oryza sativa Japonica Group]
 gi|125583560|gb|EAZ24491.1| hypothetical protein OsJ_08251 [Oryza sativa Japonica Group]
 gi|215767479|dbj|BAG99707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 75  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 132

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QLER  + L             L Q+N +L ++ MS+ + ++    T  G      D+
Sbjct: 133 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDV 190


>gi|187471148|sp|A2X980.1|HOX16_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX16; AltName:
           Full=HD-ZIP protein HOX16; AltName: Full=Homeodomain
           transcription factor HOX16; AltName: Full=OsHox16
 gi|125540995|gb|EAY87390.1| hypothetical protein OsI_08797 [Oryza sativa Indica Group]
          Length = 345

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 77  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 134

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QLER  + L             L Q+N +L ++ MS+ + ++    T  G      D+
Sbjct: 135 QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDV 192


>gi|110349540|gb|ABG73245.1| class III HD-Zip protein HDZ31 [Pinus taeda]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|89514869|gb|ABD75309.1| class III homeodomain-leucine zipper protein C3HDZ1 [Pseudotsuga
           menziesii]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPMLSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L +   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|24417151|dbj|BAC22514.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 848

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 28  KYVRYTTEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 85

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 86  --QRKESSRLQTVNKKLSAMN 104



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 211 AARACGLVSLEPTKIVEILKDRPSWFR--DCRNLEVFT--MFPAGNGGT----IELVYTQ 262

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+         + A  FV    LPSG +
Sbjct: 263 IFAPTTLAPARDFWTLRYTTTLENGSLVVCERSLSGSGAGPNPAAASQFVRGEMLPSGYL 322

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S V  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 323 IRPCEGGGSIVHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 370


>gi|82909871|gb|ABB94099.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|317160480|gb|ADV04322.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|82908650|gb|ABB93495.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908654|gb|ABB93497.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908656|gb|ABB93498.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908658|gb|ABB93499.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908660|gb|ABB93500.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908662|gb|ABB93501.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908664|gb|ABB93502.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908666|gb|ABB93503.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908668|gb|ABB93504.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908670|gb|ABB93505.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908672|gb|ABB93506.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908674|gb|ABB93507.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908676|gb|ABB93508.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908678|gb|ABB93509.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908680|gb|ABB93510.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908682|gb|ABB93511.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908684|gb|ABB93512.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908686|gb|ABB93513.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908688|gb|ABB93514.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908690|gb|ABB93515.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908692|gb|ABB93516.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908694|gb|ABB93517.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908696|gb|ABB93518.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908698|gb|ABB93519.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908700|gb|ABB93520.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908702|gb|ABB93521.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908704|gb|ABB93522.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908706|gb|ABB93523.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908708|gb|ABB93524.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908710|gb|ABB93525.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908712|gb|ABB93526.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908714|gb|ABB93527.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908716|gb|ABB93528.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908718|gb|ABB93529.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908720|gb|ABB93530.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908722|gb|ABB93531.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908724|gb|ABB93532.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908726|gb|ABB93533.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908728|gb|ABB93534.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908730|gb|ABB93535.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908732|gb|ABB93536.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908734|gb|ABB93537.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908736|gb|ABB93538.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908738|gb|ABB93539.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908740|gb|ABB93540.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
 gi|82908742|gb|ABB93541.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908744|gb|ABB93542.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908748|gb|ABB93544.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908750|gb|ABB93545.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908752|gb|ABB93546.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908754|gb|ABB93547.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908756|gb|ABB93548.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908760|gb|ABB93550.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908762|gb|ABB93551.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908764|gb|ABB93552.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908768|gb|ABB93554.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908770|gb|ABB93555.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908772|gb|ABB93556.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908774|gb|ABB93557.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908778|gb|ABB93559.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908780|gb|ABB93560.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908782|gb|ABB93561.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908784|gb|ABB93562.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908786|gb|ABB93563.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908788|gb|ABB93564.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908790|gb|ABB93565.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908794|gb|ABB93567.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908796|gb|ABB93568.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908798|gb|ABB93569.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908800|gb|ABB93570.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908802|gb|ABB93571.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908804|gb|ABB93572.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908806|gb|ABB93573.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908808|gb|ABB93574.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908810|gb|ABB93575.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908812|gb|ABB93576.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908816|gb|ABB93578.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908818|gb|ABB93579.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908820|gb|ABB93580.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908822|gb|ABB93581.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908826|gb|ABB93583.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908828|gb|ABB93584.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908830|gb|ABB93585.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908832|gb|ABB93586.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908834|gb|ABB93587.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908836|gb|ABB93588.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908838|gb|ABB93589.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908840|gb|ABB93590.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908844|gb|ABB93592.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82909691|gb|ABB94009.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909693|gb|ABB94010.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909695|gb|ABB94011.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909697|gb|ABB94012.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909699|gb|ABB94013.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909701|gb|ABB94014.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909703|gb|ABB94015.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909705|gb|ABB94016.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909707|gb|ABB94017.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909709|gb|ABB94018.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909711|gb|ABB94019.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909713|gb|ABB94020.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909715|gb|ABB94021.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909717|gb|ABB94022.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909719|gb|ABB94023.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909721|gb|ABB94024.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909723|gb|ABB94025.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909725|gb|ABB94026.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909727|gb|ABB94027.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909729|gb|ABB94028.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909731|gb|ABB94029.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909733|gb|ABB94030.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909737|gb|ABB94032.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909739|gb|ABB94033.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909741|gb|ABB94034.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909743|gb|ABB94035.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909745|gb|ABB94036.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909747|gb|ABB94037.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909749|gb|ABB94038.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909751|gb|ABB94039.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909753|gb|ABB94040.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909755|gb|ABB94041.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909757|gb|ABB94042.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909759|gb|ABB94043.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909761|gb|ABB94044.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909763|gb|ABB94045.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909765|gb|ABB94046.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909767|gb|ABB94047.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909769|gb|ABB94048.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909771|gb|ABB94049.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909773|gb|ABB94050.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909775|gb|ABB94051.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909777|gb|ABB94052.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909779|gb|ABB94053.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909781|gb|ABB94054.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909783|gb|ABB94055.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909785|gb|ABB94056.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909787|gb|ABB94057.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909789|gb|ABB94058.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909791|gb|ABB94059.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909793|gb|ABB94060.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909795|gb|ABB94061.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909797|gb|ABB94062.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909799|gb|ABB94063.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909801|gb|ABB94064.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909803|gb|ABB94065.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909805|gb|ABB94066.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909807|gb|ABB94067.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909809|gb|ABB94068.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909811|gb|ABB94069.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909813|gb|ABB94070.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909815|gb|ABB94071.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909817|gb|ABB94072.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909819|gb|ABB94073.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909821|gb|ABB94074.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909823|gb|ABB94075.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909825|gb|ABB94076.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909827|gb|ABB94077.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909829|gb|ABB94078.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909831|gb|ABB94079.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909833|gb|ABB94080.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909835|gb|ABB94081.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909837|gb|ABB94082.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909839|gb|ABB94083.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909841|gb|ABB94084.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909843|gb|ABB94085.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909845|gb|ABB94086.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909847|gb|ABB94087.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909849|gb|ABB94088.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909851|gb|ABB94089.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909853|gb|ABB94090.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909855|gb|ABB94091.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909857|gb|ABB94092.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909859|gb|ABB94093.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909861|gb|ABB94094.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909863|gb|ABB94095.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909865|gb|ABB94096.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909867|gb|ABB94097.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909869|gb|ABB94098.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909873|gb|ABB94100.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909875|gb|ABB94101.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909877|gb|ABB94102.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909879|gb|ABB94103.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909881|gb|ABB94104.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909883|gb|ABB94105.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909885|gb|ABB94106.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909887|gb|ABB94107.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909889|gb|ABB94108.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909891|gb|ABB94109.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909893|gb|ABB94110.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909895|gb|ABB94111.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909897|gb|ABB94112.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909899|gb|ABB94113.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909901|gb|ABB94114.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909903|gb|ABB94115.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909905|gb|ABB94116.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909907|gb|ABB94117.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909909|gb|ABB94118.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909911|gb|ABB94119.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909913|gb|ABB94120.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909915|gb|ABB94121.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909917|gb|ABB94122.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909919|gb|ABB94123.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909921|gb|ABB94124.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909923|gb|ABB94125.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909925|gb|ABB94126.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909927|gb|ABB94127.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
 gi|82909929|gb|ABB94128.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|82908652|gb|ABB93496.1| homeodomain-leucine zipper trancription factor HB-3 [Picea abies]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEVLKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|90110450|gb|ABD90527.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L +   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKERPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|414871782|tpg|DAA50339.1| TPA: putative homeobox/lipid-binding domain family protein [Zea
           mays]
          Length = 174

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 24/109 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 29  KYVRYTPEQVEALERVYSECPKPSSLRRQQLI-RECPILSNIEPKQIKVWFQNRRCREKQ 87

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNP 222
           + E              N LL +END+L+        EN  +R  + NP
Sbjct: 88  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNP 136


>gi|82908746|gb|ABB93543.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908758|gb|ABB93549.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908766|gb|ABB93553.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908776|gb|ABB93558.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908792|gb|ABB93566.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908814|gb|ABB93577.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908824|gb|ABB93582.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
 gi|82908842|gb|ABB93591.1| homeodomain-leucine zipper trancription factor HB-3 [Picea mariana]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|270008516|gb|EFA04964.1| hypothetical protein TcasGA2_TC015038 [Tribolium castaneum]
          Length = 151

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           +D A +    K+  ++TP+QI  LES F E  +    +R EL+K   L  RQV FWFQNR
Sbjct: 14  MDLAHHILTPKKRLKYTPEQISLLESAFAENAYILGNRRKELAKSTALSERQVTFWFQNR 73

Query: 186 RTQMKTQLERHENSLLRQENDKL 208
           R++M+ ++++ E  L R  ND L
Sbjct: 74  RSKMRREIKKQE-ELERCINDYL 95


>gi|82909735|gb|ABB94031.1| homeodomain-leucine zipper trancription factor HB-3 [Picea glauca]
          Length = 842

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQ 183
           A N     +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQ
Sbjct: 10  AKNSMDTSKYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQ 68

Query: 184 NRRTQMKTQLERHENSLLRQENDKLRAEN 212
           NRR + K   +R E S L+  N KL A N
Sbjct: 69  NRRCREK---QRKEASRLQTVNRKLTAMN 94



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V ++   + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 209 AARACGLVGLDPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+     T G P+      FV    LPS
Sbjct: 261 TYAATTLASARDFWTLRYTTVLEDGSLVVCERSLSG---TQGGPSIPPVQHFVRAEMLPS 317

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G ++Q    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 318 GYLIQPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 369


>gi|212275139|ref|NP_001130421.1| uncharacterized protein LOC100191517 [Zea mays]
 gi|194689074|gb|ACF78621.1| unknown [Zea mays]
 gi|194700286|gb|ACF84227.1| unknown [Zea mays]
 gi|238011534|gb|ACR36802.1| unknown [Zea mays]
          Length = 290

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 23/127 (18%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 32  PEKKR--RLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 89

Query: 192 QLERHENSL-------------LRQENDKLRAENMSI-------RDAMRNPICTNCGGPA 231
           QLER  + L             L Q+N++LR++ +S+        DA       +   PA
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADTAAPA 149

Query: 232 IIGDISL 238
           +  + SL
Sbjct: 150 VDVEASL 156


>gi|147820900|emb|CAN60898.1| hypothetical protein VITISV_008021 [Vitis vinifera]
          Length = 267

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 525 VTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTG 583
           VTWVEH E D+ S  H+LY+ L+   + FGA+R V TLQR CE LA L   +   RD  G
Sbjct: 74  VTWVEHVEVDDKSLTHRLYRDLVSGSLAFGAERMVGTLQRMCERLAYLADENTPTRDLAG 133

Query: 584 IYDI 587
           +  +
Sbjct: 134 VISL 137


>gi|413923851|gb|AFW63783.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 1 [Zea mays]
 gi|413923852|gb|AFW63784.1| putative homeobox DNA-binding and leucine zipper domain family
           protein isoform 2 [Zea mays]
          Length = 299

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 16/107 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 32  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 89

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICT 225
           QLER  + L             L Q+N +LR++ +S+ + +R    T
Sbjct: 90  QLERDFDRLKASFDALRADHDALLQDNHRLRSQVVSLTEKLREKEAT 136


>gi|294462511|gb|ADE76802.1| unknown [Picea sitchensis]
          Length = 328

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 18/116 (15%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +DLD   +PP KKR  R T  Q+Q LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 71  EDLDDCIHPPEKKR--RLTADQVQFLERSFEIENKLEPERKIQLAKDLGLQPRQVAVWFQ 128

Query: 184 NRRTQMKT-QLE--------RHEN------SLLRQENDKLRAENMSIRDAMRNPIC 224
           NRR + KT QLE        R+EN      SLL+ E DKLRAE   +   + +  C
Sbjct: 129 NRRARWKTKQLERDYDILKSRYENLRVDYDSLLK-EKDKLRAEVTFLTGKLHSKDC 183


>gi|71021689|ref|XP_761075.1| hypothetical protein UM04928.1 [Ustilago maydis 521]
 gi|46100639|gb|EAK85872.1| hypothetical protein UM04928.1 [Ustilago maydis 521]
          Length = 1084

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           L AA  P  +K+ ++ TP+Q+  LE+ F++  +P  + RLELS++L +  R V+ WFQNR
Sbjct: 240 LSAAFRPRGRKKRNKCTPEQLHSLEAFFEKNRNPTGRIRLELSRKLRMPERSVQVWFQNR 299

Query: 186 RTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
           R ++KT   R +       +D  R ++ S+R   ++    + G  A +G
Sbjct: 300 RAKVKTVERRGDPG-----SDSSRKKSCSLRLNDKDAHSKSAGDNARLG 343


>gi|223973911|gb|ACN31143.1| unknown [Zea mays]
 gi|223974081|gb|ACN31228.1| unknown [Zea mays]
 gi|238011808|gb|ACR36939.1| unknown [Zea mays]
          Length = 330

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 23/127 (18%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 72  PEKKR--RLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 129

Query: 192 QLERHENSL-------------LRQENDKLRAENMSI-------RDAMRNPICTNCGGPA 231
           QLER  + L             L Q+N++LR++ +S+        DA       +   PA
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADTAAPA 189

Query: 232 IIGDISL 238
           +  + SL
Sbjct: 190 VDVEASL 196


>gi|195623632|gb|ACG33646.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195624474|gb|ACG34067.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 331

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 23/127 (18%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 72  PEKKR--RLTPEQVLLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 129

Query: 192 QLERHENSL-------------LRQENDKLRAENMSI-------RDAMRNPICTNCGGPA 231
           QLER  + L             L Q+N++LR++ +S+        DA       +   PA
Sbjct: 130 QLERDFDRLKASFDALRADHDALLQDNNRLRSQVVSLTEKLQEKEDATEGGATADTAAPA 189

Query: 232 IIGDISL 238
           +  + SL
Sbjct: 190 VDVEASL 196


>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
          Length = 220

 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ KL        D  +NP+  +   
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--------DGRKNPVAGSKYL 198

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 199 GPSLKG 204


>gi|89514875|gb|ABD75312.1| class III homeodomain-leucine zipper protein C3HDZ2 [Taxus globosa]
          Length = 843

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+++CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTAEQVEALERLYRDCPKPSSIRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 10/174 (5%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + E L D   W      +   TA     S+G GGT    +
Sbjct: 205 HGCTGVAARACGLVGLEPTKVAEILKDRPSWFRDCRSVDVLTA----FSTGNGGT----V 256

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA--FVNCRRL 509
           ++++ ++   + L P R+   LR+     +G   V + S+      S  P   FV     
Sbjct: 257 EILYMQMYAPTTLAPARDFCTLRYTSVMEDGSLVVCERSLSDKGSPSMPPVPHFVRAEMF 316

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           PSG +++    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 317 PSGYLIRPCEGGSSIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQRTTMAALRR 370


>gi|60327621|gb|AAX19050.1| class III HD-Zip protein 1 [Populus trichocarpa]
          Length = 855

 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 19/110 (17%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           +H   SGS +++    D+           +Y R+T +Q++ LE ++ ECP P   +R +L
Sbjct: 8   QHRESSGSGSLNKHLTDN----------GKYVRYTSEQVEALERVYAECPKPSSLRRQQL 57

Query: 168 SKRLC-----LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAEN 212
             R C     +E +Q+K WFQNRR + K   +R E+S L+  N KL A N
Sbjct: 58  -IRECPILANIEPKQIKVWFQNRRCREK---QRKESSRLQTVNRKLTAMN 103



 Score = 42.4 bits (98), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 24/181 (13%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    L E L D   W     C      T  V  +G GGT    ++L++++
Sbjct: 210 AARACGLVSLEPTKLAEILKDRQSWFR--DCRNLEVFT--VFPAGNGGT----IELLYSQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---------FVNCRR 508
           +   + L P R+   LR+      G   V +      R  SG+ A         FV    
Sbjct: 262 IYAPTTLAPARDFWTLRYTINLENGSLVVCE------RSLSGSGAGPNAAAAAQFVRAEM 315

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           LPSG +++    G S +  V+H       V ++ +PL  S     AQ+   T  R    +
Sbjct: 316 LPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKAV-AQKVTITALRHVRQI 374

Query: 569 A 569
           A
Sbjct: 375 A 375


>gi|302761652|ref|XP_002964248.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
 gi|302815769|ref|XP_002989565.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300142743|gb|EFJ09441.1| hypothetical protein SELMODRAFT_129907 [Selaginella moellendorffii]
 gi|300167977|gb|EFJ34581.1| hypothetical protein SELMODRAFT_81609 [Selaginella moellendorffii]
          Length = 127

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 118 MDGASGDDLDAADNPPRKKRYH------RHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           MD AS D+ DA D+ P   + H      R +  Q++ LE  F++    + +++L+L+K L
Sbjct: 1   MDHAS-DEEDAIDDDPGAGQQHHIEKKRRLSVDQVKSLERHFEQDNKLEPERKLQLAKEL 59

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSI 215
            L+ RQV  WFQNRR + KT+    +   L++  D LR +  S+
Sbjct: 60  SLQPRQVAVWFQNRRARWKTKQLEKDYDALKENLDALRGDYKSL 103


>gi|356542621|ref|XP_003539765.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 2
           [Glycine max]
          Length = 844

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 83  --QRKEASRLQTVNRKLTAMN 101



 Score = 42.4 bits (98), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 209 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYTQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
               + L P R+   LR+      G   V + S+    T    + A  FV    LPSG +
Sbjct: 261 TYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAETLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 321 IRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 368


>gi|356539327|ref|XP_003538150.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Glycine
           max]
          Length = 842

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 83  --QRKEASRLQTVNRKLTAMN 101



 Score = 42.7 bits (99), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 209 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYTQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
               + L P R+   LR+      G   V + S+    T    + A  FV    LPSG +
Sbjct: 261 TYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAETLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 321 IRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 368


>gi|24417149|dbj|BAC22513.1| homeobox leucine-zipper protein [Zinnia elegans]
          Length = 846

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 33  KYVRYTAEQVEALERVYAECPKPSSLKRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 90

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 91  --QRKEASRLQMVNRKLSAMN 109



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    +VE L D   W     C      T  ++ +G GGT    ++L++ +
Sbjct: 216 AARACGLVSLEPTKIVEILKDRTSWFR--DCRNLEVLT--MLPAGNGGT----IELVYTQ 267

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTI---RETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+         + A  FV    LPSG +
Sbjct: 268 VYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGPGGGPNAAAASQFVRGEMLPSGYL 327

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +     ++ +PL  S      +  +A L+
Sbjct: 328 IRPCDGGGSIIHIVDHLNLEPWSAPEVLRPLYESSKVVAQKMTIAALR 375


>gi|356542619|ref|XP_003539764.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like isoform 1
           [Glycine max]
          Length = 845

 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 83  --QRKEASRLQTVNRKLTAMN 101



 Score = 42.4 bits (98), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 209 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYTQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
               + L P R+   LR+      G   V + S+    T    + A  FV    LPSG +
Sbjct: 261 TYAPTTLAPARDFWTLRYTTSLENGSLVVCERSLSGSGTGPNPAAAAQFVRAETLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 321 IRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALR 368


>gi|413956878|gb|AFW89527.1| putative homeobox DNA-binding and leucine zipper domain family
           protein, partial [Zea mays]
          Length = 137

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 4/104 (3%)

Query: 110 ESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           E+  G+ N D  S D    A  P  KKR  R   +Q++ LE  F+     + +++L+L++
Sbjct: 35  EASCGATNEDEVSDDGSLQAVGPGEKKR--RLNVEQVRTLEKNFELGNKLEAERKLQLAR 92

Query: 170 RLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQENDKLRAEN 212
            L L+ RQV  WFQNRR + KT QLE+  ++L RQ  D ++A+N
Sbjct: 93  ALGLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQL-DAVKADN 135


>gi|224131988|ref|XP_002328157.1| predicted protein [Populus trichocarpa]
 gi|60327623|gb|AAX19051.1| class III HD-Zip protein 2 [Populus trichocarpa]
 gi|222837672|gb|EEE76037.1| predicted protein [Populus trichocarpa]
          Length = 844

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQL-IRECPILANIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 83  --QRKESSRLQTVNRKLTAMN 101


>gi|90110448|gb|ABD90526.1| class III homeodomain-leucine zipper [Ginkgo biloba]
          Length = 842

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 45.4 bits (106), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVIS---SGMGGTRNGALQLM 454
           A+R  G+V +    + E L D   W     C+       DV++   +G GGT    ++L+
Sbjct: 208 AARACGLVGLEPTKIAEILKDRPSWLRDCRCL-------DVLTPFPTGNGGT----IELL 256

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE-TSGAPA--FVNCRRLPS 511
           + +    + L   R+   LR+     +G   V + S+   +   S APA  FV    LPS
Sbjct: 257 YMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHFVRAEMLPS 316

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G +++    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 317 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 368


>gi|89514863|gb|ABD75306.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ginkgo biloba]
          Length = 842

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 45.4 bits (106), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVIS---SGMGGTRNGALQLM 454
           A+R  G+V +    + E L D   W     C+       DV++   +G GGT    ++L+
Sbjct: 208 AARACGLVGLEPTKIAEILKDRPSWLRDCRCL-------DVLTPFPTGNGGT----IELL 256

Query: 455 HAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRE-TSGAPA--FVNCRRLPS 511
           + +    + L   R+   LR+     +G   V + S+   +   S APA  FV    LPS
Sbjct: 257 YMQTYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLSGAQGGPSIAPAQHFVRAEMLPS 316

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G +++    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 317 GYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKMTIAALRR 368


>gi|449522211|ref|XP_004168121.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Cucumis
           sativus]
          Length = 841

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTSEQVEALERVYAECPKPSSLRRQQLV-RDCPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 83  --QRKEASRLQTVNRKLNAMN 101



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 17/176 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVSLEPSKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+         + A  FV    LPSG +
Sbjct: 262 VYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL------IISGMGFGAQRWVATLQRQ 564
           ++    G S +  V+H   +   V ++ +PL      +   M   A R+V  + ++
Sbjct: 322 IRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQE 377


>gi|297793627|ref|XP_002864698.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310533|gb|EFH40957.1| hypothetical protein ARALYDRAFT_496218 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 844

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC----LETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +E +Q+K WFQNRR + K  
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK-- 82

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E S L+  N KL A N
Sbjct: 83  -QRKEASRLQSVNRKLSAMN 101



 Score = 39.3 bits (90), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 17/176 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 207 AARACGLVSLEPMKIAEILKDRPSWFR--DCRSLEVFT--LFPAGNGGT----IELVYMQ 258

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
               + L P R+   LR+      G + V + S+         + A  FV    L SG +
Sbjct: 259 TYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYL 318

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL------IISGMGFGAQRWVATLQRQ 564
           ++    G S +  V+H   +   V  + +PL      +   M   A R++  L ++
Sbjct: 319 IRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQE 374


>gi|392597820|gb|EIW87142.1| hypothetical protein CONPUDRAFT_69445 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 715

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 31/161 (19%)

Query: 36  NNNMPTTTTLAHP---RLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGD-LQLQRMG 91
           N ++P++ TL  P   R  S +      S FN+PG   +   P +D     D  ++    
Sbjct: 2   NFSLPSSPTLIPPVSARQFSKSGSSHGMSTFNAPGGRSSQHNPPVDMAPSTDEAKMSGAS 61

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELES 151
           +     +G              GSD    +             KK  HRH+P Q+  L  
Sbjct: 62  DKSPTTVG--------------GSDKASSS-------------KKPRHRHSPAQLAALNE 94

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           LF +  HP  + R EL++RL +ET+ V  WFQN+R   K +
Sbjct: 95  LFDQNEHPSLEDRTELAERLGMETKTVNAWFQNKRASTKKR 135



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 199
           R  P+Q +EL   +   PHP  ++R  L+++  L  + +  WFQN+R+Q K  + RH+++
Sbjct: 309 RTLPEQAEELRKAYAANPHPSREERELLAEKTGLRYQSITNWFQNQRSQAK--IRRHKDT 366

Query: 200 LLRQENDKLRAENMSIRDAMRN 221
            L  E+  +  + M  +D  RN
Sbjct: 367 PL--ESTTVPYDPMDAQDMPRN 386


>gi|388856268|emb|CCF50077.1| uncharacterized protein [Ustilago hordei]
          Length = 997

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 63  FNSPGLSLALQQPNIDNQG-GGDLQL----QRMGESFEGIIGRRSREDLLEHESRSGSDN 117
           +++ G SL L+  +  + G  GD+ L     R  +SF+    R    DLL+    + + +
Sbjct: 155 YDTQGNSLGLKADSGLHVGLNGDIDLNASMHRDQKSFDPSDSR----DLLDSLPYTANSS 210

Query: 118 MDGASGDDLDAADNPPRKKRY------------HRHTPQQIQELESLFKECPHPDEKQRL 165
            D  S +D   +D PP KK+             ++ TP Q++ LE+ F++  +P  + R 
Sbjct: 211 ADNDSYEDSTDSDLPPEKKKLSAAFRPRGRKKRNKCTPDQLRSLEAFFEKNRNPTGRIRH 270

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           ELS+RL +  R V+ WFQNRR ++KT +ER  ++       K  +  +S +D  R P+  
Sbjct: 271 ELSRRLRMPERSVQVWFQNRRAKVKT-VERRGDTGSDSCKQKSCSTRLSEKDTYR-PVGL 328

Query: 226 N 226
           N
Sbjct: 329 N 329


>gi|172087376|ref|XP_001913230.1| HOX12 [Oikopleura dioica]
 gi|42601357|gb|AAS21383.1| HOX12 [Oikopleura dioica]
          Length = 509

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 124 DDLDAADNPP--RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           DD++ A  P   RKKR   +T  QIQELE+ F+       +QR E+S+RL L  RQVK W
Sbjct: 233 DDMEDAGTPRVGRKKR-RPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIW 291

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           FQNRR + K   +R  +   R  +    AE M
Sbjct: 292 FQNRRMKEKRLRQRGHSPRTRDRHQMDAAEQM 323


>gi|209171587|gb|ACI42914.1| tendril-less [Lens culinaris]
          Length = 237

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 48/76 (63%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 204
           Q+  LE  F E    D +++++LS  L L+ RQV  WFQNRRT+ KT+   H   +L+QE
Sbjct: 81  QVDALERSFNEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEHSYDVLKQE 140

Query: 205 NDKLRAENMSIRDAMR 220
           N KL+ E + +++ ++
Sbjct: 141 NQKLQEEVIELKEKLK 156


>gi|15239411|ref|NP_200877.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
 gi|75203823|sp|Q9SE43.2|REV_ARATH RecName: Full=Homeobox-leucine zipper protein REVOLUTA; AltName:
           Full=HD-ZIP protein REV; AltName: Full=Homeodomain
           transcription factor REV; AltName: Full=Protein
           AMPHIVASAL VASCULAR BUNDLE 1; AltName: Full=Protein
           INTERFASCICULAR FIBERLESS 1
 gi|7229679|gb|AAF42938.1|AF233592_1 REVOLUTA [Arabidopsis thaliana]
 gi|24416437|gb|AAF15262.2|AF188994_1 homeodomain-leucine zipper protein interfascicular fiberless 1
           [Arabidopsis thaliana]
 gi|9759333|dbj|BAB09842.1| Revoluta [Arabidopsis thaliana]
 gi|27413560|gb|AAO11835.1| homeodomain-leucine zipper protein [Arabidopsis thaliana]
 gi|110738992|dbj|BAF01416.1| REVOLUTA or interfascicular fiberless 1 [Arabidopsis thaliana]
 gi|332009984|gb|AED97367.1| homeobox-leucine zipper protein REVOLUTA [Arabidopsis thaliana]
          Length = 842

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC----LETRQVKFWFQNRRTQMKTQ 192
           +Y R+T +Q++ LE ++ ECP P   +R +L +       +E +Q+K WFQNRR + K  
Sbjct: 25  KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDK-- 82

Query: 193 LERHENSLLRQENDKLRAEN 212
            +R E S L+  N KL A N
Sbjct: 83  -QRKEASRLQSVNRKLSAMN 101



 Score = 38.9 bits (89), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 72/176 (40%), Gaps = 17/176 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +  + + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 206 AARACGLVSLEPMKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYMQ 257

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
               + L P R+   LR+      G + V + S+         + A  FV    L SG +
Sbjct: 258 TYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYL 317

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL------IISGMGFGAQRWVATLQRQ 564
           ++    G S +  V+H   +   V  + +PL      +   M   A R++  L ++
Sbjct: 318 IRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQE 373


>gi|209171589|gb|ACI42915.1| tendril-less [Vicia narbonensis]
          Length = 237

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 48/79 (60%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           T  Q+  LE  F E    D +++++LS  L L+ RQV  WFQNRRT+ KT+       +L
Sbjct: 78  TSNQVDALERSFHEEIKLDPERKMKLSAELGLQPRQVAVWFQNRRTRWKTKQLEQSYDVL 137

Query: 202 RQENDKLRAENMSIRDAMR 220
           +QEN KL+ E M +++ ++
Sbjct: 138 KQENQKLQDEVMELKEKLK 156


>gi|449456008|ref|XP_004145742.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           REVOLUTA-like [Cucumis sativus]
          Length = 840

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 25  KYVRYTSEQVEALERVYAECPKPSSLRRQQLV-RDCPILSNIEPKQIKVWFQNRRCREK- 82

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 83  --QRKEASRLQTVNRKLNAMN 101



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 17/176 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 209 AARACGLVSLEPSKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----IELVYTQ 260

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+         + A  FV    LPSG +
Sbjct: 261 VYAPTTLAPARDFWTLRYTITLENGSLVVCERSLSGSGAGPSEAAAAQFVRAEMLPSGYL 320

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL------IISGMGFGAQRWVATLQRQ 564
           ++    G S +  V+H   +   V ++ +PL      +   M   A R+V  + ++
Sbjct: 321 IRPCEGGGSIIHIVDHLNLEAWHVPEVLRPLYESSKVVAQKMTIAALRYVRQIAQE 376


>gi|45775302|gb|AAS77254.1| class III HD-Zip protein [Populus tremula x Populus alba]
          Length = 843

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 27  KYVRYTSEQVEALERVYAECPKPSSLRRQQL-IRECPILANIEPKQIKVWFQNRRCREK- 84

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E+S L+  N KL A N
Sbjct: 85  --QRKESSRLQTVNRKLTAMN 103



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 24/181 (13%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    L E L D  R +    C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVSLEPTKLAEILKD--RQSRFRDCRNLEPFT--MFPAGNGGT----IELLYRQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---------FVNCRR 508
           +   + L P R+   LR+      G   V D      R  SG+ A         FV    
Sbjct: 262 IYAPTTLAPARDFWTLRYTISLENGSLVVCD------RSLSGSGAGPNAAAAAQFVRAEM 315

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECL 568
           LPSG +++    G S +  V+H       V ++ +PL  S     AQ+   T  R    +
Sbjct: 316 LPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSKAV-AQKVTITALRHVRQI 374

Query: 569 A 569
           A
Sbjct: 375 A 375


>gi|390605024|gb|EIN14415.1| hypothetical protein PUNSTDRAFT_49209 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 496

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 4/71 (5%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D DA+   PR    HRH P Q+Q+L +L++   HP  + R  L +R+ + TR V  WFQN
Sbjct: 16  DSDASKKGPR----HRHRPDQVQQLMALYERDDHPSLEDRTALGQRIGMPTRTVNAWFQN 71

Query: 185 RRTQMKTQLER 195
           RR  ++ + ER
Sbjct: 72  RRAALRKRAER 82


>gi|89514867|gb|ABD75308.1| class III homeodomain-leucine zipper protein C3HDZ3 [Ginkgo biloba]
          Length = 837

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 15  KYVRYTAEQVEALERLYNDCPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 72

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 73  --QRKEASRLQTVNRKLTAMN 91



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           ASR  G+V + S  + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 206 ASRACGLVGLESSKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYTQ 257

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L   R++  LR+     +G   V + S+   +     P+   FV    LPSG +
Sbjct: 258 MYAPTTLASARDIWTLRYTSVLEDGSLVVCERSLTGTQGGPNMPSVQHFVRAEMLPSGYL 317

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + +   V ++ +PL  S      +  ++ L+
Sbjct: 318 IRPCEGGGSIIHIVDHMDLEPWSVPEVIRPLYESSTVLAQKMTISALR 365


>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
 gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
          Length = 220

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ KL        D  +NP   +   
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--------DGRKNPAAGSKYL 198

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 199 GPSLKG 204


>gi|449526020|ref|XP_004170013.1| PREDICTED: homeobox-leucine zipper protein HDG12-like, partial
           [Cucumis sativus]
          Length = 307

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)

Query: 525 VTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLA 569
           VTWVEH E D+ +Q H+LY+ L+ + + +GA RW+ TLQR CE LA
Sbjct: 1   VTWVEHVEVDDKTQTHRLYRDLVFNTLAYGADRWLFTLQRMCERLA 46


>gi|317160482|gb|ADV04323.1| class III homeodomain leucine zipper protein [Picea glauca]
          Length = 836

 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 44.7 bits (104), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 68/151 (45%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G   +    + + L D   W     C+   TA      +G GGT    +++++ +
Sbjct: 208 AARACGFAGLEPSKVADILKDRPAWLHDCRCLNVLTA----FPTGKGGT----VEVLYTQ 259

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L P R++  LR+     +G   V + S+  I+     P+   FV  + LPSG +
Sbjct: 260 MYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGIQSGPNMPSVQHFVRAQMLPSGYL 319

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++    G   +  V+H + +   V ++ +PL
Sbjct: 320 IRPCEGGGCIIHIVDHMDLEPWSVPEVIRPL 350


>gi|1435019|dbj|BAA05622.1| DNA-binding protein [Daucus carota]
          Length = 206

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 9/100 (9%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +D D   +PP KKR  R T  Q++ LE  F+     +  ++++L+K L L+ RQV  WFQ
Sbjct: 78  EDYDPCLHPPEKKR--RLTVDQVKYLEKSFEVENKLEPDRKVQLAKDLGLQPRQVAIWFQ 135

Query: 184 NRRTQMKT-QLERHENSL------LRQENDKLRAENMSIR 216
           NRR + KT QLE+  +SL      LR ++D+L  EN  +R
Sbjct: 136 NRRARYKTKQLEKDYDSLKECYDKLRDDHDRLSKENEKLR 175


>gi|358248872|ref|NP_001240210.1| uncharacterized protein LOC100813420 [Glycine max]
 gi|255635463|gb|ACU18084.1| unknown [Glycine max]
          Length = 284

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 29/144 (20%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KK  HR + +Q+  LE  F+E    + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 63  PEKK--HRLSSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMR--------NPICTNCGGP 230
           QLER  + L             + +EN+KL++E +S+ + ++         P+C     P
Sbjct: 121 QLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSLNEKLQVQAKEVPEEPLCDKKVDP 180

Query: 231 AIIGDISLEEQHLRIENARLKDEL 254
                I ++E    I   R++D L
Sbjct: 181 -----IPVDEDMAPIFGTRVEDHL 199


>gi|297746262|emb|CBI16318.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 26  KYVRYTAEQVEALERVYLECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 83

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 84  --QRKEASRLQTVNRKLTAMN 102



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C      T  +  +G GGT    ++L++ +
Sbjct: 210 AARACGLVSLEPSKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNGGT----VELLYTQ 261

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+      G   V + S+        T+ A  FV    LPSG +
Sbjct: 262 IYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNTAAAAQFVRAEMLPSGYL 321

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H   +   V ++ +PL  S      +  +A L+
Sbjct: 322 IRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMTIAALR 369


>gi|313226651|emb|CBY21796.1| unnamed protein product [Oikopleura dioica]
          Length = 509

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 3/92 (3%)

Query: 124 DDLDAADNPP--RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           DD++ A  P   RKKR   +T  QIQELE+ F+       +QR E+S+RL L  RQVK W
Sbjct: 233 DDMEDAGTPRVGRKKR-RPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIW 291

Query: 182 FQNRRTQMKTQLERHENSLLRQENDKLRAENM 213
           FQNRR + K   +R  +   R  +    AE M
Sbjct: 292 FQNRRMKEKRLRQRGHSPRTRDRHQMDAAEQM 323


>gi|110349544|gb|ABG73247.1| class III HD-Zip protein HDZ33 [Pinus taeda]
          Length = 840

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 14/185 (7%)

Query: 388 GLKPN----GFVTEASRETGMVIINSLALVETLMDPNRWAEMF---PCMIARTATTDVIS 440
           G+KP     G VT ++  TG   + + A     ++P++ A++    P  +      DV++
Sbjct: 187 GMKPGPDSIGIVTISNSCTG---VAARACGFAGLEPSKVADILKDRPAWLHDCRRLDVLT 243

Query: 441 SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGA 500
           +   G + GA +L++ ++   + L P R++  LR+     +G   V + S+   +     
Sbjct: 244 AFPTG-KGGAFELLYTQMYAPTTLAPARDLLTLRYTSLLEDGSLVVCERSLTGTQSGPNM 302

Query: 501 PA---FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 557
           P    FV  + LPSG +++    G   +  V+H + +   V ++ +PL  S      +  
Sbjct: 303 PPVQHFVRTQMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVIRPLYESSAVLAQKMT 362

Query: 558 VATLQ 562
           +  L+
Sbjct: 363 ITALR 367


>gi|89514871|gb|ABD75310.1| class III homeodomain-leucine zipper protein C3HDZ2 [Pseudotsuga
           menziesii]
          Length = 839

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 75  --QRKEASRLQTVNRKLTAMN 93



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G   +    + + L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 208 AARACGFAGLEPSKVADILKDRPAWLHDCRCLDVLTA----FPTGKGGT----IELLYTQ 259

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L P R++  LR+     +G   V + S+   +     P+   FV  + LPSG +
Sbjct: 260 MYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFVRAQMLPSGYL 319

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++    G   +  V+H + +   V ++ +PL
Sbjct: 320 IRPCEGGGCIIHIVDHMDLEPWTVPEVIRPL 350


>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
 gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
          Length = 220

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 88  GSYNTDFHLKSYGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 147

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ KL        D  +NP   +   
Sbjct: 148 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKL--------DGRKNPAAGSKYL 198

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 199 GPSLKG 204


>gi|147783606|emb|CAN61612.1| hypothetical protein VITISV_013992 [Vitis vinifera]
          Length = 842

 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 26  KYVRYTAEQVEALERVYLECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREK- 83

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 84  --QRKEASRLQTVNRKLTAMN 102



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 7/125 (5%)

Query: 441 SGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRET 497
           +G GGT    ++L++ ++   + L P R+   LR+      G   V + S+        T
Sbjct: 247 AGNGGT----VELLYTQIYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNT 302

Query: 498 SGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRW 557
           + A  FV    LPSG +++    G S +  V+H   +   V ++ +PL  S      +  
Sbjct: 303 AAAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSRVVAQKMT 362

Query: 558 VATLQ 562
           +A L+
Sbjct: 363 IAALR 367


>gi|357143608|ref|XP_003572981.1| PREDICTED: homeobox-leucine zipper protein HOX16-like [Brachypodium
           distachyon]
          Length = 340

 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 9/91 (9%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT+
Sbjct: 78  PEKKR--RLTPEQVHLLEKSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 135

Query: 193 -LERHENSL------LRQENDKLRAENMSIR 216
            LER  + L      LR ++D L  +N  +R
Sbjct: 136 TLERDFDRLKASFDALRADHDALLQDNHRLR 166


>gi|225449048|ref|XP_002274194.1| PREDICTED: homeobox-leucine zipper protein REVOLUTA-like [Vitis
           vinifera]
          Length = 841

 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 17/91 (18%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E++Q+K WFQNRR + K 
Sbjct: 28  KYVRYTAEQVEALERVYAECPKPSSTRRQQL-IRECPILSNIESKQIKVWFQNRRCREKQ 86

Query: 192 QLERHE-----------NSLLRQENDKLRAE 211
           + E  +           N LL +EN++L+ +
Sbjct: 87  KKEAVQLQSVNKKLNSMNKLLMEENERLQKQ 117



 Score = 40.8 bits (94), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R   +V +    ++E L D   W         R      + +       G L+L++ +
Sbjct: 212 AARACSLVSLEPTEIMEILKDRQSWF--------RDCRKLEVFAKFPAGNGGILELIYMQ 263

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+     +G   V + S+         S A  FV  + LPSG +
Sbjct: 264 VYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAKMLPSGYL 323

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + +   V ++ +PL  S      +  VA L 
Sbjct: 324 IRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALH 371


>gi|89514873|gb|ABD75311.1| class III homeodomain-leucine zipper protein C3HDZ1 [Taxus globosa]
          Length = 837

 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 24/108 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 14  KYVRYTSEQVEALERVYSECPKPSSLRRQQL-IRECPILSNIEPKQIKVWFQNRRCREKQ 72

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRN 221
           + E              N LL +END+L+        EN  +R  ++N
Sbjct: 73  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYMRQQLQN 120



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 17/172 (9%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V +    + E L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 205 AARACGLVGLEPTKVAEILKDRPSWLRDCRCLDVLTA----FPTGNGGT----IELLYMQ 256

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVNCRRLPS 511
               + L   R+   LR+     +G   V + S+++   T G P+      FV    LPS
Sbjct: 257 TYAPTTLASARDFWTLRYTTVLEDGSLVVCERSLNS---TQGGPSMPPVPHFVRAEMLPS 313

Query: 512 GCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQR 563
           G +++    G S +  V+H + +   V ++ +PL  S      +  +A L+R
Sbjct: 314 GYLIRPCEGGGSIIRIVDHMDLEPWSVPEVLRPLYESSTILAQKMTIAALRR 365


>gi|296086017|emb|CBI31458.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 17/91 (18%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E++Q+K WFQNRR + K 
Sbjct: 27  KYVRYTAEQVEALERVYAECPKPSSTRRQQL-IRECPILSNIESKQIKVWFQNRRCREKQ 85

Query: 192 QLERHE-----------NSLLRQENDKLRAE 211
           + E  +           N LL +EN++L+ +
Sbjct: 86  KKEAVQLQSVNKKLNSMNKLLMEENERLQKQ 116



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 11/168 (6%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R   +V +    ++E L D   W         R      + +       G L+L++ +
Sbjct: 211 AARACSLVSLEPTEIMEILKDRQSWF--------RDCRKLEVFAKFPAGNGGILELIYMQ 262

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSID---TIRETSGAPAFVNCRRLPSGCV 514
           +   + L P R+   LR+     +G   V + S+         S A  FV  + LPSG +
Sbjct: 263 VYAPTTLAPARDFWTLRYTSSLEDGSLVVCERSMSGSGAGPNPSTASQFVRAKMLPSGYL 322

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
           ++    G S +  V+H + +   V ++ +PL  S      +  VA L 
Sbjct: 323 IRPCEGGGSIIHIVDHLDLEAWSVPEVLQPLYKSSKLVAQKMTVAALH 370


>gi|326502292|dbj|BAJ95209.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326505580|dbj|BAJ95461.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 336

 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 19/124 (15%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT+
Sbjct: 70  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 127

Query: 193 -LERHENSL-------------LRQENDKLRAENMSIRDAMRNPIC-TNCGGPAIIGDIS 237
            LER  + L             L Q+N +LR++ +++ + M+       C G A+  D S
Sbjct: 128 TLERDFDRLKASFDALRADHDALLQDNHRLRSQVVTLTEKMQEKEAPEGCFGAAV--DAS 185

Query: 238 LEEQ 241
             EQ
Sbjct: 186 ESEQ 189


>gi|302398829|gb|ADL36709.1| HD domain class transcription factor [Malus x domestica]
          Length = 324

 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 90/192 (46%), Gaps = 34/192 (17%)

Query: 93  SFEGIIG----RRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
           SFE + G     RS     EHE     DN D    DDLD   + P KKR  R T  Q+Q 
Sbjct: 52  SFEDVRGGSGSNRSLFRQFEHE-----DNGD----DDLDEYLHQPGKKR--RLTADQVQF 100

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL------- 200
           LE  F      + ++++ L+K L L+ RQV  WFQNRR + KT QLE+    L       
Sbjct: 101 LEKSFDVENKLEPERKVLLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEELQANYNNL 160

Query: 201 ------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD---ISLEEQHLRIENARLK 251
                 L +ENDKL+AE   + D +   +     G + + D   +S E     I +   +
Sbjct: 161 KANCESLSKENDKLKAEVTVLSDKLH--LKEKERGNSELSDTNRLSQEPPQKPIADTVSE 218

Query: 252 DELDRVCALAGK 263
            E+ +V A+A K
Sbjct: 219 GEVSKVSAVASK 230


>gi|109729905|tpg|DAA05766.1| TPA_inf: class III HD-Zip protein REV1 [Lotus japonicus]
          Length = 841

 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T  Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 22  KYVRYTAGQVEALERVYTECPKPSSLRRQQL-IRECPVLANVEPKQIKVWFQNRRCREK- 79

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 80  --QRKEASRLQAVNRKLNAMN 98


>gi|75315198|sp|Q9XH36.1|HOX5_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|5006855|gb|AAD37698.1|AF145729_1 homeodomain leucine zipper protein [Oryza sativa Indica Group]
 gi|125561547|gb|EAZ06995.1| hypothetical protein OsI_29241 [Oryza sativa Indica Group]
          Length = 350

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT+
Sbjct: 84  PEKKR--RLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 141

Query: 193 LERHENSLLRQENDKLRAENMSI 215
              H+   L+   D L A++ ++
Sbjct: 142 QLEHDFDRLKAAYDALAADHHAL 164


>gi|115476422|ref|NP_001061807.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|75134805|sp|Q6ZA74.1|HOX5_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX5; AltName:
           Full=HD-ZIP protein HOX5; AltName: Full=Homeodomain
           transcription factor HOX5; AltName: Full=OsHox5
 gi|37573050|dbj|BAC98578.1| homeodomain leucine zipper protein [Oryza sativa Japonica Group]
 gi|113623776|dbj|BAF23721.1| Os08g0416000 [Oryza sativa Japonica Group]
 gi|125603415|gb|EAZ42740.1| hypothetical protein OsJ_27319 [Oryza sativa Japonica Group]
          Length = 349

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT+
Sbjct: 84  PEKKR--RLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 141

Query: 193 LERHENSLLRQENDKLRAENMSI 215
              H+   L+   D L A++ ++
Sbjct: 142 QLEHDFDRLKAAYDALAADHHAL 164


>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
 gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
          Length = 692

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 6/107 (5%)

Query: 107 LEHESRSGSDNMDG----ASGDDLDA-ADNPPRKKRYHRHTPQQIQELESLFKECPHPDE 161
           +EH   SG  +M+     + GDD  + AD   +++     T  Q+ ELE +F E  +PD 
Sbjct: 554 VEHRESSGLLHMEDFHLKSYGDDASSLADKSKQRRIRTTFTSNQLNELEKIFLETHYPDI 613

Query: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
             R E++ +L L   +V+ WFQNRR + + Q ERH   +++ ++ K+
Sbjct: 614 YTREEIASKLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSAKM 659


>gi|255717921|ref|XP_002555241.1| KLTH0G04686p [Lachancea thermotolerans]
 gi|238936625|emb|CAR24804.1| KLTH0G04686p [Lachancea thermotolerans CBS 6340]
          Length = 375

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 130 DNPPRKKRYHRHTPQ-QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           DN P  +R  R T + ++  L+S F+ CP PD+++R ELSKR C+  + ++ WFQN+R  
Sbjct: 157 DNAPLARRKRRRTSKHELNILQSEFEICPTPDKQKRAELSKRCCMSEKAIQIWFQNKRQS 216

Query: 189 MKTQ 192
           +K Q
Sbjct: 217 VKRQ 220


>gi|224102511|ref|XP_002312706.1| predicted protein [Populus trichocarpa]
 gi|222852526|gb|EEE90073.1| predicted protein [Populus trichocarpa]
          Length = 302

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 4/92 (4%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           +S +D DA   P  KKR  R T  Q+Q LE  F+     + +++++L+K L L+ RQV  
Sbjct: 66  SSDEDYDAHLKPSEKKR--RLTAAQVQFLEKSFEAENKLEPERKMQLAKELGLQPRQVAI 123

Query: 181 WFQNRRTQMKT-QLERHENSLLRQENDKLRAE 211
           WFQNRR + K  QLER  +S LR   DKL+A+
Sbjct: 124 WFQNRRARFKNKQLERDYDS-LRISFDKLKAD 154


>gi|66809961|ref|XP_638704.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
 gi|74996893|sp|Q54PU1.1|HBX10_DICDI RecName: Full=Homeobox protein 10; Short=DdHbx-10
 gi|60467302|gb|EAL65335.1| hypothetical protein DDB_G0284293 [Dictyostelium discoideum AX4]
          Length = 638

 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 27/146 (18%)

Query: 45  LAHPRLLSSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSRE 104
           +A P L  S+P  L+  + +S  L             GGDL       S  G++G     
Sbjct: 239 IAVPNLSESSPAVLNTKLKDSSNLV----------PYGGDL-----NTSVNGVVG----- 278

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
                 + SG  ++  ++GD L +  N   KK+  R +P+Q+  LE +F+    P ++ R
Sbjct: 279 ------NSSGMVDLSASTGDLLGSL-NAANKKKRQRTSPEQLAILEQIFETDKMPSQQIR 331

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMK 190
           + L+ +L + +R+V+ WFQN+R ++K
Sbjct: 332 VRLANQLGMSSRRVQIWFQNKRAKVK 357


>gi|356519319|ref|XP_003528320.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Glycine
           max]
          Length = 178

 Score = 58.9 bits (141), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 70/126 (55%), Gaps = 8/126 (6%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDD--------LDAADNPPRKKRYHRHTPQQIQELE 150
           G R  E   +HE++S     +  S +D        +D +DN   + +  R   +Q++ L+
Sbjct: 47  GSRDPESPSKHETKSSVLKNNACSTNDNQNLNNVVVDDSDNTGARDKKRRLNMEQVKTLQ 106

Query: 151 SLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA 210
             F+   + + ++++ L++ L L+ RQ+  WFQNRRT+ KT+    +  LL+++ + ++A
Sbjct: 107 KSFELGNNLEPERKMLLARALRLQPRQIAIWFQNRRTRWKTKQLEKDYDLLKRQYEAIKA 166

Query: 211 ENMSIR 216
           +N +++
Sbjct: 167 DNDALQ 172


>gi|45593096|gb|AAS68137.1| homeodomain leucine zipper protein 16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 30  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 87

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QLER  + L             L Q+N +L ++ MS+ + ++    T  G      D+
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDV 145


>gi|326522983|dbj|BAJ88537.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 190

 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 24/113 (21%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP Q++ LE ++ +CP P   +R +L  R C     +E RQ+K WFQNRR + K 
Sbjct: 26  KYVRYTPDQVEMLERVYADCPKPTSSRRQQLL-RECPILANIEARQIKVWFQNRRCRDKL 84

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRNPICTN 226
           + E              N LL +EN++L+        EN  +R  ++N    N
Sbjct: 85  RKESSRLESVNRKVSAMNKLLMEENERLQKQVSQLVHENAQVRQQLQNTSMAN 137


>gi|46242599|gb|AAS83417.1| Hox16 [Oryza sativa Japonica Group]
          Length = 353

 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+E    + +++ EL+++L L+ RQV  WFQNRR + KT 
Sbjct: 30  PEKKR--RLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTK 87

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDI 236
           QLER  + L             L Q+N +L ++ MS+ + ++    T  G      D+
Sbjct: 88  QLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDV 145


>gi|449492695|ref|XP_004159074.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis
           sativus]
          Length = 278

 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 16/126 (12%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           PP KKR  R T +Q+  LE  F+     + +++ EL+K+L L+ RQV  WFQNRR + KT
Sbjct: 62  PPEKKR--RLTQEQVHLLEISFESENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKT 119

Query: 192 -QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS 237
            QLER  + L             + +EN++L+AE  S+ + ++          A   D  
Sbjct: 120 KQLERDYDLLKSSYDSFRSSYDFIAKENERLKAEVASLTEKLQAKEVVESSFHAKNPDPF 179

Query: 238 LEEQHL 243
           LE+Q L
Sbjct: 180 LEDQLL 185


>gi|312381847|gb|EFR27493.1| hypothetical protein AND_05774 [Anopheles darlingi]
          Length = 524

 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 5/74 (6%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  R+ R +  T +Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +
Sbjct: 440 NKQRRSRTN-FTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 498

Query: 191 TQLERHENSLLRQE 204
               +HEN L + E
Sbjct: 499 ----KHENQLHKGE 508


>gi|326516528|dbj|BAJ92419.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 289

 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 19/135 (14%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-Q 192
           RKKR+   + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ Q
Sbjct: 65  RKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 121

Query: 193 LERHENSL------LRQENDKLRAENMS-------IRDAMRNPICTNCGGPAIIGDISLE 239
           LER   +L      L    D+L+ +  +       + + +R P    CG  A   D   +
Sbjct: 122 LERQYAALRDDYDALLSSYDQLKKDKQALVNQLEKLAEMLREPGGAKCGDNAGAAD--RD 179

Query: 240 EQHLRIENARLKDEL 254
              L +    +KDE 
Sbjct: 180 NMRLAVAGMSMKDEF 194


>gi|357440243|ref|XP_003590399.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
 gi|355479447|gb|AES60650.1| Homeobox-leucine zipper protein ATHB-22 [Medicago truncatula]
          Length = 232

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 12/118 (10%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  +KKR    T +Q++ LES F+E    D +++++LSK L L+ RQ+  WFQNRR + K
Sbjct: 56  NQEKKKRL---TSEQMESLESSFQEEIKLDPQRKMKLSKELGLQPRQIAIWFQNRRARWK 112

Query: 191 T-QLE------RHENSLLRQENDKLRAENMSIRDAMRNPICTNCGG-PAIIGDISLEE 240
           T QLE      RH+  ++ +E  +L+ E M ++ AM      +CG       ++S+EE
Sbjct: 113 TKQLEHLYDSLRHQFEVVSKEKQQLQDEVMKLK-AMLKEQGNSCGRMQGYYTEMSVEE 169


>gi|449440459|ref|XP_004138002.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 240

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 10/125 (8%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           G D+++  N  +KKR    + +Q++ LE  F+E    D  ++ +LSK L L+ RQ+  WF
Sbjct: 55  GMDMNSYGNLEKKKRL---SSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWF 111

Query: 183 QNRRTQMKTQLERHENSLLRQEND-------KLRAENMSIRDAMRNPICTNCGGPAIIGD 235
           QNRR + K +   H    L+QE D       KL+ E M ++  +R           +  D
Sbjct: 112 QNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTD 171

Query: 236 ISLEE 240
           +S EE
Sbjct: 172 LSGEE 176


>gi|255540907|ref|XP_002511518.1| homeobox protein, putative [Ricinus communis]
 gi|223550633|gb|EEF52120.1| homeobox protein, putative [Ricinus communis]
          Length = 319

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 16/104 (15%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           + DDLD   + P KKR  R T  Q+Q LE  F+     + +++L+L+K L L+ RQV  W
Sbjct: 78  ADDDLDEYFHQPEKKR--RLTVDQVQFLEKSFEVENKLEPERKLQLAKDLGLQPRQVAIW 135

Query: 182 FQNRRTQMKTQ--------LERHENSL------LRQENDKLRAE 211
           FQNRR + KT+        L+   NSL      L QE D+L+AE
Sbjct: 136 FQNRRARWKTKQMEKDYDVLQTSYNSLKADYDALLQEKDRLKAE 179


>gi|326527745|dbj|BAK08147.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 292

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 19/135 (14%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-Q 192
           RKKR+   + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ Q
Sbjct: 68  RKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQ 124

Query: 193 LERHENSL------LRQENDKLRAENMS-------IRDAMRNPICTNCGGPAIIGDISLE 239
           LER   +L      L    D+L+ +  +       + + +R P    CG  A   D   +
Sbjct: 125 LERQYAALRDDYDALLSSYDQLKKDKQALVNQLEKLAEMLREPGGAKCGDNAGAAD--RD 182

Query: 240 EQHLRIENARLKDEL 254
              L +    +KDE 
Sbjct: 183 NMRLAVAGMSMKDEF 197


>gi|449521341|ref|XP_004167688.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like,
           partial [Cucumis sativus]
          Length = 230

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 10/125 (8%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           G D+++  N  +KKR    + +Q++ LE  F+E    D  ++ +LSK L L+ RQ+  WF
Sbjct: 55  GMDMNSYGNLEKKKRL---SSEQLESLERSFQEEIKLDPDRKQKLSKELGLQPRQIAVWF 111

Query: 183 QNRRTQMKTQLERHENSLLRQEND-------KLRAENMSIRDAMRNPICTNCGGPAIIGD 235
           QNRR + K +   H    L+QE D       KL+ E M ++  +R           +  D
Sbjct: 112 QNRRARWKAKQLEHLYDTLKQEFDAISREKHKLQEEVMKLKSMLRELQAARNQVSTVYTD 171

Query: 236 ISLEE 240
           +S EE
Sbjct: 172 LSGEE 176


>gi|356548619|ref|XP_003542698.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Glycine max]
          Length = 285

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 14/110 (12%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  D    +K+ HR + +Q+  LE  F+E    + +++ +L+K+L L+ RQV  WFQN
Sbjct: 54  DEEYYDKQSPEKKKHRLSSEQVHLLEKNFEEENKLEPERKTQLAKKLGLQPRQVAVWFQN 113

Query: 185 RRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAMR 220
           RR + KT QLER  + L             + +EN+KL++E +S+ + ++
Sbjct: 114 RRARWKTKQLERDYDVLKSSYDTLLSSYDSIMKENEKLKSEVVSLNEKLQ 163


>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
          Length = 250

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 113 SGSDNMDGASGDDLDAADNPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQRLELS 168
            G ++MD  +G D D+      K++  RH    T QQ+ ELE  F    +PD   R EL+
Sbjct: 159 KGHNDMDAGTGSDCDSEPGLSLKQKQRRHRTTFTAQQMDELEKAFDRTQYPDVYTREELA 218

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQL 193
           +R  L   +++ WF NRR +++ Q+
Sbjct: 219 QRTKLTEARIQVWFSNRRARLRKQV 243


>gi|89514861|gb|ABD75305.1| class III homeodomain-leucine zipper protein C3HDZ1 [Ceratopteris
           richardii]
          Length = 844

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q+Q LE L+ ECP+P   +RL+L  R C     +E +Q+K WFQN   + K 
Sbjct: 17  KYVRYTQEQVQALERLYAECPNPSSFRRLQL-LRECPILSKIEPKQIKVWFQNGGCRDK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L   N+KL A N
Sbjct: 75  --QRKEASRLANLNEKLSAMN 93


>gi|195489357|ref|XP_002092703.1| GE11517 [Drosophila yakuba]
 gi|194178804|gb|EDW92415.1| GE11517 [Drosophila yakuba]
          Length = 219

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 87  GSYNTDFHLKSFGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 146

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ K+        D  +NP   +   
Sbjct: 147 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKM--------DGRKNPAAGSKYL 197

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 198 GPSLKG 203


>gi|18996777|gb|AAL83210.1|AF465939_1 paired-like homeodomain transcription factor Shox [Branchiostoma
           floridae]
          Length = 286

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 110 ESRSGSDNMD----GASGDDLDAADNPPRKKRYHR----HTPQQIQELESLFKECPHPDE 161
           E+  G +N D    G   DDL++ ++   K +  R     T +Q+QELE LF E  +PD 
Sbjct: 72  ENSPGPENKDPSKPGEKKDDLESPNSKDGKLKQRRSRTNFTLEQLQELERLFDETHYPDA 131

Query: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
             R ELS+RL L   +V+ WFQNRR + + Q
Sbjct: 132 FMREELSQRLGLSEARVQVWFQNRRAKCRKQ 162


>gi|33391193|gb|AAQ17211.1| paired and homeobox transcription factor [Tripedalia cystophora]
          Length = 527

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           RK RY+  TP+Q   LE LF++ P+PD   R E++K+  L   +V+ WF NRR +M+ Q
Sbjct: 245 RKNRYN-FTPEQTDLLEQLFEKTPYPDATTREEIAKKTNLSEARVQVWFSNRRAKMRKQ 302


>gi|357477401|ref|XP_003608986.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|217073494|gb|ACJ85107.1| unknown [Medicago truncatula]
 gi|355510041|gb|AES91183.1| Homeobox-leucine zipper protein ATHB-6 [Medicago truncatula]
 gi|388499834|gb|AFK37983.1| unknown [Medicago truncatula]
          Length = 337

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 21/141 (14%)

Query: 93  SFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESL 152
           SFE + GR+ R     + S  G  ++D    D++D   +   KKR  R +  Q+Q LE  
Sbjct: 58  SFEDVQGRKRR-----NRSFFGGFDLDENGEDEMDEYFHQSEKKR--RLSVDQVQFLEKS 110

Query: 153 FKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL----------- 200
           F+E    + +++ +L+K L L+ RQV  WFQNRR + KT QLE+  +SL           
Sbjct: 111 FEEDNKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDSLNDGYESLKTEY 170

Query: 201 --LRQENDKLRAENMSIRDAM 219
             L +E D+L++E  S+ + +
Sbjct: 171 DNLLKEKDRLQSEVASLTEKV 191


>gi|253761856|ref|XP_002489302.1| hypothetical protein SORBIDRAFT_0010s004460 [Sorghum bicolor]
 gi|241946950|gb|EES20095.1| hypothetical protein SORBIDRAFT_0010s004460 [Sorghum bicolor]
          Length = 274

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 4/49 (8%)

Query: 468 REVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPAFVNCRRLPSGCVVQ 516
           R +N  ++CKQ+A+G WA+VDVS+D++R  S     + CRR PSGC+++
Sbjct: 222 RRLNIEKYCKQNADGTWAIVDVSLDSLRPRS----VLKCRRWPSGCLIE 266


>gi|168004063|ref|XP_001754731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693835|gb|EDQ80185.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 821

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 6   KYVRYTNEQVEALERVYHECPKPSSIRRHQLIKE-CPILANIEPKQIKVWFQNRRCREK- 63

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E + L   N KL A N
Sbjct: 64  --QRKEATRLVSVNAKLTALN 82



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 11/174 (6%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G V  A+R  G+  ++   + E L D   W++   C   R      + +G GGT    +
Sbjct: 192 HGCVGIAARACGLAALDFSKVAEILKDRPGWSQ--DCR--RMEVLGTLPTGNGGT----I 243

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAP---AFVNCRR 508
           +L++ ++   + L P R+   LR+     +G   + + S+         P   +F+    
Sbjct: 244 ELLYTQMYAPTTLAPARDFCTLRYTTLLEDGNLVICERSLTGKHNGPTMPPVQSFIRAEM 303

Query: 509 LPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQ 562
            PSG +++    G   +  V+H EY+   V ++ +PL  S      +  +A L+
Sbjct: 304 FPSGYLIRPCEGGGCIIHIVDHVEYEPWSVPEVLRPLYESPAVLAHKSTIAALR 357


>gi|75114385|sp|Q651Z5.1|HOX6_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
 gi|187609458|sp|Q9XH35.2|HOX6_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX6; AltName:
           Full=HD-ZIP protein HOX6; AltName: Full=Homeodomain
           transcription factor HOX6; AltName: Full=OsHox6
 gi|52077331|dbj|BAD46372.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|215736997|dbj|BAG95926.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765407|dbj|BAG87104.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 249

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 8/90 (8%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AAD   RKKR+   + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R 
Sbjct: 27  AAD---RKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 80

Query: 188 QMKT-QLERHENSLLRQENDKLRAENMSIR 216
           + K+ QLER E S LR + D L     S++
Sbjct: 81  RWKSKQLER-EYSALRDDYDALLCSYESLK 109


>gi|193237555|dbj|BAG50054.1| transcription factor Homeobox [Lotus japonicus]
          Length = 284

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 16/112 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+E    + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 63  PEKKR--RLTSEQVNLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGP 230
           QLER  + L             + +EN+KL++E +S+ + ++       G P
Sbjct: 121 QLERDYDVLKSSYDSLLATYDTIAKENEKLKSEVVSLNEKLQVQATEMPGEP 172


>gi|15148918|gb|AAK84886.1|AF402605_1 homeodomain leucine zipper protein HDZ2 [Phaseolus vulgaris]
          Length = 327

 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 21/140 (15%)

Query: 94  FEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           FE + G R   D    ++    DN D    DD +   + P KKR  R T +Q+Q LE  F
Sbjct: 50  FENVSGGRVT-DRPFFQALEKEDNCD----DDYEGCFHQPGKKR--RLTSEQVQFLERNF 102

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL------------ 200
           +     + +++++L+K L L+ RQV  WFQNRR + KT QLE+   +L            
Sbjct: 103 EVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASYDRLKGDYE 162

Query: 201 -LRQENDKLRAENMSIRDAM 219
            L QENDKL+AE  S+   +
Sbjct: 163 SLLQENDKLKAEVNSLESKL 182


>gi|3581955|emb|CAA64692.1| homeodomain protein [Girardia tigrina]
          Length = 404

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 19/147 (12%)

Query: 86  QLQRMGE----SFEGIIGRRSREDLLEHESRSGSDNMDGASGDD---LDAADNPPRKKR- 137
           Q+Q + E     FE     RS +   E+E+ SG+ N  GA            N  +K+R 
Sbjct: 206 QIQNIDEIGDDKFEIDCSMRSEQKFNENETNSGTRNDGGAQQIWPWMTVVGPNSVQKRRG 265

Query: 138 ---YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
              Y RH   Q  ELE  F+   +   ++R+E++  LCL  RQ+K WFQNRR  MK + E
Sbjct: 266 RQTYSRH---QTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRR--MKLKKE 320

Query: 195 RHENSLLRQENDKLRAENMSIRDAMRN 221
           R +   +R+ ND++  + +S +    N
Sbjct: 321 RQQ---IRELNDEITRKTISKKHLSSN 344


>gi|110349560|gb|ABG73255.1| class III HD-Zip protein HDZ31 [Austrobaileya scandens]
          Length = 181

 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 24/108 (22%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR ++K 
Sbjct: 2   KYVRYTAEQVEALERVYTECPKPSSMRRQQLV-RECSILANIEPKQIKVWFQNRRCRVKQ 60

Query: 192 QLERHE-----------NSLLRQENDKLRA-------ENMSIRDAMRN 221
           + E              N LL +END+L+        EN  +R  ++N
Sbjct: 61  RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLLYENGYMRQQLQN 108


>gi|115480285|ref|NP_001063736.1| Os09g0528200 [Oryza sativa Japonica Group]
 gi|5006857|gb|AAD37699.1|AF145730_1 homeodomain leucine zipper protein, partial [Oryza sativa Indica
           Group]
 gi|113631969|dbj|BAF25650.1| Os09g0528200, partial [Oryza sativa Japonica Group]
          Length = 212

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 8/82 (9%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AAD   RKKR+   + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R 
Sbjct: 49  AAD---RKKRF---SEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRA 102

Query: 188 QMKT-QLERHENSLLRQENDKL 208
           + K+ QLER E S LR + D L
Sbjct: 103 RWKSKQLER-EYSALRDDYDAL 123


>gi|194885740|ref|XP_001976486.1| GG19984 [Drosophila erecta]
 gi|190659673|gb|EDV56886.1| GG19984 [Drosophila erecta]
          Length = 219

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 14/126 (11%)

Query: 114 GSDNMD---GASGDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           GS N D    + GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ 
Sbjct: 87  GSYNSDFHLKSFGDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIAS 146

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPIC-TNCG 228
           +L L   +V+ WFQNRR + + Q ERH   +++ ++ K+        D  +NP   +   
Sbjct: 147 KLHLTEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSSKM--------DGRKNPAAGSKYL 197

Query: 229 GPAIIG 234
           GP++ G
Sbjct: 198 GPSLKG 203


>gi|89514841|gb|ABD75295.1| class III homeodomain-leucine zipper protein C3HDZ1 [Marchantia
           polymorpha]
          Length = 860

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKD-CPILANIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E + L   N KL A N
Sbjct: 75  --QRKEATRLLSVNAKLTALN 93



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 23/185 (12%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + + L D   W  +  C   R        +G GGT    +
Sbjct: 214 HGCAGVAARACGLVGLEPTKVADVLKDRPAW--LRDCR--RLDVLGAFPTGNGGT----V 265

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVN 505
           +L++ ++   + L P R+   LR+     +G   + + S+       GAP       FV 
Sbjct: 266 ELIYTQMYAPTTLAPARDFCTLRYTSFLEDGNLVICERSLSG---AHGAPTMPPVQFFVR 322

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG------MGFGAQRWVA 559
              LPSG +++    G   +  V+H + +   V ++ +PL  S       M  GA R + 
Sbjct: 323 AEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQKMTIGALRHLR 382

Query: 560 TLQRQ 564
            L ++
Sbjct: 383 RLAQE 387


>gi|443707331|gb|ELU02974.1| hypothetical protein CAPTEDRAFT_158069 [Capitella teleta]
          Length = 325

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 3/75 (4%)

Query: 130 DNPPR-KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D+PP+ K+R  R   T +Q+ ELE LF E  +PD   R ELS+RL L   +++ WFQNRR
Sbjct: 142 DDPPKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLALSEARIQVWFQNRR 201

Query: 187 TQMKTQLERHENSLL 201
            + + Q  + +  LL
Sbjct: 202 AKCRKQESQLQKGLL 216


>gi|310792453|gb|EFQ27980.1| homeobox domain-containing protein [Glomerella graminicola M1.001]
          Length = 666

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 95  EGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPP--RKKRYHRHTPQQIQELESL 152
           E    + S +D LE E     D +DG  G    AA+     RK +  R T QQ + L S 
Sbjct: 164 EANTSKESDDDALEDE-----DMLDGGDGTPQTAAERTAARRKMKRFRLTHQQTRFLMSE 218

Query: 153 FKECPHPDEKQRLELSKRLC-LETRQVKFWFQNRRTQMK 190
           F + PHPD   R  LS+ +  L  RQV+ WFQNRR ++K
Sbjct: 219 FAKQPHPDAAHRERLSREIPGLSPRQVQVWFQNRRAKIK 257


>gi|332017590|gb|EGI58290.1| Protein gooseberry-neuro [Acromyrmex echinatior]
          Length = 398

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 18/121 (14%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFK 154
           R  +DL  + S  G   + G+SGDD D    P     RK+R  R   T +Q+++LE+ F 
Sbjct: 144 RPGDDLRRNHSIDGI--LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFH 201

Query: 155 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 214
              +PD   R EL+++  L   +V+ WF NRR +++ QL           + +L A NMS
Sbjct: 202 RTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL----------NSQQLNAFNMS 251

Query: 215 I 215
           +
Sbjct: 252 L 252


>gi|353241025|emb|CCA72865.1| related to homeodomain transcription factor-Laccaria bicolor
           [Piriformospora indica DSM 11827]
          Length = 662

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N P K++  R TP+Q+ ELE  F     P   QR  +S RL ++ RQ + WFQNRR + K
Sbjct: 57  NRPEKRKRSRVTPEQLVELEKEFAINRTPTGAQRKAISDRLGMQERQTQIWFQNRRAKAK 116

Query: 191 TQLER 195
            Q +R
Sbjct: 117 HQEQR 121


>gi|3550811|dbj|BAA32684.1| homeodomain protein [Drosophila melanogaster]
          Length = 93

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 123 GDD-LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           GDD L   D   +++     T  Q+ ELE +F E  +PD   R E++ +L L   +V+ W
Sbjct: 9   GDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVW 68

Query: 182 FQNRRTQMKTQLERHENSLLRQENDK 207
           FQNRR + + Q ERH   +++ ++ K
Sbjct: 69  FQNRRAKFRKQ-ERHAIYIMKDKSSK 93


>gi|296490338|tpg|DAA32451.1| TPA: short stature homeobox-like isoform 1 [Bos taurus]
          Length = 294

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
            D  D    +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L 
Sbjct: 100 KDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 159

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLL 201
             +V+ WFQNRR + + Q  +  NS++
Sbjct: 160 EARVQVWFQNRRAKCRKQENQMHNSVI 186


>gi|443689509|gb|ELT91883.1| hypothetical protein CAPTEDRAFT_94879 [Capitella teleta]
          Length = 89

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P RK+    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR  MK 
Sbjct: 11  PERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKW 68

Query: 192 QLERHENSLLRQEND 206
           + E  +  +LRQ  D
Sbjct: 69  KKENRQIEVLRQHTD 83


>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
 gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
          Length = 306

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
            D  D    +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L 
Sbjct: 100 KDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 159

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLL 201
             +V+ WFQNRR + + Q  +  NS++
Sbjct: 160 EARVQVWFQNRRAKCRKQENQMHNSVI 186


>gi|119331578|gb|ABL63115.1| DNA-binding protein [Catharanthus roseus]
          Length = 282

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 17/128 (13%)

Query: 100 RRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHP 159
           +R +    + E  SG++N DG          + P KKR  R T  Q+Q LE  F+     
Sbjct: 14  KREKSFFPQEEENSGNENFDGYF--------HHPEKKR--RLTADQVQFLEKSFEVENKL 63

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL------LRQENDKLRAEN 212
           + +++++L+K L L+ RQV  WFQNRR + KT QLE+  +SL      L  + D L  EN
Sbjct: 64  EPERKVQLAKELGLQPRQVAIWFQNRRARYKTKQLEKEYDSLKSSFDKLNADYDSLFKEN 123

Query: 213 MSIRDAMR 220
             +++ ++
Sbjct: 124 EKLKNEVK 131


>gi|297806351|ref|XP_002871059.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316896|gb|EFH47318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 215

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 195
           K+  R T +Q+  LE  F+E    D +++L+L+K L LE RQV  WFQNRR + K +   
Sbjct: 78  KKNKRLTSEQLASLELRFQEDFKLDSERKLKLAKELGLEPRQVAVWFQNRRARWKVKHLE 137

Query: 196 HENSLLRQENDKLRAENMSIRDAMR 220
                LRQE D +  E   + D ++
Sbjct: 138 ESYDSLRQEYDAIWREKQMLHDEVK 162


>gi|260817384|ref|XP_002603567.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
 gi|229288886|gb|EEN59578.1| hypothetical protein BRAFLDRAFT_79100 [Branchiostoma floridae]
          Length = 275

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 110 ESRSGSDNMD----GASGDDLDAADNPPRKKRYHR----HTPQQIQELESLFKECPHPDE 161
           E+  G +N D    G   DD+++ ++   K +  R     T +Q+QELE LF E  +PD 
Sbjct: 72  ENSPGPENKDPSKPGEKKDDIESPNSKDGKLKQRRSRTNFTLEQLQELERLFDETHYPDA 131

Query: 162 KQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
             R ELS+RL L   +V+ WFQNRR + + Q
Sbjct: 132 FMREELSQRLGLSEARVQVWFQNRRAKCRKQ 162


>gi|308080696|ref|NP_001183865.1| uncharacterized protein LOC100502458 [Zea mays]
 gi|238015104|gb|ACR38587.1| unknown [Zea mays]
 gi|408690316|gb|AFU81618.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|413956877|gb|AFW89526.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 344

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)

Query: 110 ESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSK 169
           E+  G+ N D  S D    A  P  KKR  R   +Q++ LE  F+     + +++L+L++
Sbjct: 90  EASCGATNEDEVSDDGSLQAVGPGEKKR--RLNVEQVRTLEKNFELGNKLEAERKLQLAR 147

Query: 170 RLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQ------ENDKLRAENMSIR 216
            L L+ RQV  WFQNRR + KT QLE+  ++L RQ      +ND L + N  ++
Sbjct: 148 ALGLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQLDAVKADNDALLSHNKKLQ 201


>gi|322800798|gb|EFZ21674.1| hypothetical protein SINV_07081 [Solenopsis invicta]
          Length = 405

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 18/121 (14%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFK 154
           R  +DL  + S  G   + G+SGDD D    P     RK+R  R   T +Q+++LE+ F 
Sbjct: 151 RPGDDLRRNHSIDGI--LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFH 208

Query: 155 ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 214
              +PD   R EL+++  L   +V+ WF NRR +++ QL           + +L A NMS
Sbjct: 209 RTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQL----------NSQQLNAFNMS 258

Query: 215 I 215
           +
Sbjct: 259 L 259


>gi|165873675|gb|ABY67962.1| antennapedia hox protein [Capitella teleta]
          Length = 104

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P RK+    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR  MK 
Sbjct: 26  PERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRR--MKW 83

Query: 192 QLERHENSLLRQEND 206
           + E  +  +LRQ  D
Sbjct: 84  KKENRQIEVLRQHTD 98


>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
          Length = 470

 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 20/114 (17%)

Query: 99  GRRSREDLLEHESRSGSDN--------------MDGASGDDLDAADNP----PRKKRYHR 140
           GRRS +   E E R G D                 G  G+D D    P     RK+R  R
Sbjct: 139 GRRSEDGDSEDERRDGEDGEKKRSHSIDGILGEKGGCRGEDSDCDSEPDLPLKRKQRRSR 198

Query: 141 --HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
              TP+Q++ELE  F+   +PD   R EL++R  L   +V+ WF NRR + + Q
Sbjct: 199 TTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQ 252


>gi|195038659|ref|XP_001990774.1| GH18074 [Drosophila grimshawi]
 gi|193894970|gb|EDV93836.1| GH18074 [Drosophila grimshawi]
          Length = 529

 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 325 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 384

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 385 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 421


>gi|410078209|ref|XP_003956686.1| hypothetical protein KAFR_0C05600 [Kazachstania africana CBS 2517]
 gi|372463270|emb|CCF57551.1| hypothetical protein KAFR_0C05600 [Kazachstania africana CBS 2517]
          Length = 384

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 130 DNPPRKKRYHRHTP-QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           DN P  +R  R T  Q++  L++ F +CP PD+K+RLEL+ R  +  + V+ WFQN+R  
Sbjct: 149 DNAPLARRKRRRTSTQELNILQASFDKCPTPDKKERLELADRCNMTEKAVQIWFQNKRQA 208

Query: 189 MK 190
           +K
Sbjct: 209 VK 210


>gi|194697640|gb|ACF82904.1| unknown [Zea mays]
          Length = 272

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 16/102 (15%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT 
Sbjct: 75  PEKKR--RLTAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 132

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMR 220
           QLE   + L             L  +ND LRA+ +S+ + ++
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLTEKLQ 174


>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
          Length = 426

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 187 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 246

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHE 197
            L   +V+ WF NRR +++ QL   +
Sbjct: 247 NLTEARVQVWFSNRRARLRKQLNSQQ 272


>gi|90110452|gb|ABD90528.1| class III homeodomain-leucine zipper [Pseudotsuga menziesii]
          Length = 840

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE L+ +CP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTAEQVEALERLYNDCPKPSSLRRQQL-IRECPILSHIEPKQIKVWFQNRRCREK- 74

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R   S L+  N KL A N
Sbjct: 75  --QRKGASRLQTVNRKLTAMN 93



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G   +    + + L D   W     C+   TA      +G GGT    ++L++ +
Sbjct: 208 AARACGFAGLEPSKVADILKDRPAWLHDCRCLDVLTA----FPTGKGGT----IELLYTQ 259

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           +   + L P R++  LR+     +G   V + S+   +     P+   FV  + LPSG +
Sbjct: 260 MYAPTTLAPARDLWTLRYTSLLEDGSLVVCERSLTGTQSGPNMPSVQHFVRAQMLPSGYL 319

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQLYKPL 545
           ++    G   +  V+H + +   V ++ +PL
Sbjct: 320 IRPCEGGGCIIHIVDHMDLEPWTVPEVIRPL 350


>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
          Length = 404

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 165 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 224

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHE 197
            L   +V+ WF NRR +++ QL   +
Sbjct: 225 NLTEARVQVWFSNRRARLRKQLNSQQ 250


>gi|195130567|ref|XP_002009723.1| GI15515 [Drosophila mojavensis]
 gi|193908173|gb|EDW07040.1| GI15515 [Drosophila mojavensis]
          Length = 288

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 18/93 (19%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q        L
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQ----L 87

Query: 202 RQENDKLRAENMSIRDAMRNPICTNCGGPAIIG 234
            Q+  ++R              C + G P +IG
Sbjct: 88  LQDAWRMR--------------CLSLGTPPVIG 106


>gi|225452490|ref|XP_002278872.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 273

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 63  PEKKR--RLTPEQVHLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 120

Query: 192 QLERHENSLLRQENDKLRAENMSI 215
           QLER +  LL+   D L +E  SI
Sbjct: 121 QLER-DYDLLKSSYDSLVSEYDSI 143


>gi|413919088|gb|AFW59020.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 164

 Score = 57.0 bits (136), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 134 RKKRYHRHTPQQIQELESLFKE---CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           R +R  R T +QI+ LES F+        + +++ EL++ L L+ RQV  WFQN+R + +
Sbjct: 55  RGERKRRFTEEQIRSLESTFRARHGHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 114

Query: 191 TQLERHENSLLRQENDKLRAENMSIR 216
           ++   H+ ++LR + D L A   S+R
Sbjct: 115 SKQLEHDYAVLRAKFDDLHARVESLR 140


>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
           rotundata]
          Length = 398

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 159 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 218

Query: 172 CLETRQVKFWFQNRRTQMKTQL 193
            L   +V+ WF NRR +++ QL
Sbjct: 219 NLTEARVQVWFSNRRARLRKQL 240


>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
          Length = 405

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 166 LGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 225

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHE 197
            L   +V+ WF NRR +++ QL   +
Sbjct: 226 NLTEARVQVWFSNRRARLRKQLNSQQ 251


>gi|300709018|ref|XP_002996678.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
 gi|239605997|gb|EEQ83007.1| hypothetical protein NCER_100211 [Nosema ceranae BRL01]
          Length = 169

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 36/62 (58%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           +P   K   R T  Q++ LE  F+ CP PD   R +L+ +L +  R V+ WFQNRR ++K
Sbjct: 26  DPFYVKHRKRTTKAQLKVLEKTFENCPRPDSTMRKKLADQLSMTPRSVQVWFQNRRAKVK 85

Query: 191 TQ 192
            Q
Sbjct: 86  KQ 87


>gi|185135921|ref|NP_001117695.1| transcription factor Nkx2.1c [Oncorhynchus mykiss]
 gi|62241056|dbj|BAD93685.1| transcription factor Nkx2.1c [Oncorhynchus mykiss]
          Length = 344

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR+KR    +  Q+ ELE  FK+  +    +R  L+  + L   QVK WFQN R +MK Q
Sbjct: 157 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 216

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGP 230
            +   N  ++QEN  + ++  S R     P+    G P
Sbjct: 217 AKDKANQQIQQENGSVCSQQQSPRRVAV-PVLVKDGKP 253


>gi|222625450|gb|EEE59582.1| hypothetical protein OsJ_11886 [Oryza sativa Japonica Group]
          Length = 152

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 9/81 (11%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+TP+Q++ LE ++ ECP P   +R +L  R C     +E +Q+K WFQNRR + K 
Sbjct: 32  KYVRYTPEQVEALERVYGECPKPSSLRRQQLI-RECPILSNIEPKQIKVWFQNRRCREK- 89

Query: 192 QLERHENSLLRQENDKLRAEN 212
             +R E S L+  N KL A N
Sbjct: 90  --QRKEASRLQTVNRKLTAMN 108


>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
          Length = 438

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 6/86 (6%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 143 LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 202

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHE 197
            L   +V+ WF NRR +++ QL   +
Sbjct: 203 KLTEARVQVWFSNRRARLRKQLNSQQ 228


>gi|296087684|emb|CBI34940.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R TP+Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 47  PEKKR--RLTPEQVHLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 104

Query: 192 QLERHENSLLRQENDKLRAENMSI 215
           QLER +  LL+   D L +E  SI
Sbjct: 105 QLER-DYDLLKSSYDSLVSEYDSI 127


>gi|34393688|dbj|BAC83418.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|50508865|dbj|BAD31642.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|125600008|gb|EAZ39584.1| hypothetical protein OsJ_24016 [Oryza sativa Japonica Group]
          Length = 91

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 41/72 (56%)

Query: 189 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENA 248
           M+   ER E   L++END L AEN  +++AM   IC  CG P +    +++ ++L  +N 
Sbjct: 1   MQMHDERQEGMWLQEENDVLHAENKVLKEAMWANICFTCGSPVVPAIPTVQHRYLSFQNM 60

Query: 249 RLKDELDRVCAL 260
           RL DEL    A+
Sbjct: 61  RLADELQHATAV 72


>gi|270002832|gb|EEZ99279.1| Ptx1 [Tribolium castaneum]
          Length = 508

 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G RS  D ++ ES  G D+ DG  G + D      R++R H  T QQ+QELE+ F    +
Sbjct: 134 GSRSLSDPIKTESGVGVDSTDGDDGKN-DKKTKRQRRQRTH-FTSQQLQELEATFARNRY 191

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           PD   R E++    L   +V+ WF+NRR + +
Sbjct: 192 PDMSTREEIAMWTNLTEARVRVWFKNRRAKWR 223


>gi|426201284|gb|EKV51207.1| hypothetical protein AGABI2DRAFT_189484 [Agaricus bisporus var.
           bisporus H97]
          Length = 490

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           D  S  D+D    P +KK  HRH+P Q+  L  LF +  HP  + R  L+ RL +ET+ V
Sbjct: 5   DSMSLPDIDT--KPSQKKPRHRHSPAQLAALNELFDKNEHPSLELRSALADRLGMETKTV 62

Query: 179 KFWFQNRRTQMK 190
             WFQN+R   K
Sbjct: 63  NAWFQNKRASTK 74



 Score = 45.4 bits (106), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           R +P QI+EL  L+   PHP  ++R  +++R+ +  + +  WFQN+R+  K + E
Sbjct: 159 RPSPDQIEELRKLYAINPHPSAEERQVIAERIGMRYQSITNWFQNQRSLAKKRRE 213


>gi|195163231|ref|XP_002022455.1| GL13041 [Drosophila persimilis]
 gi|194104447|gb|EDW26490.1| GL13041 [Drosophila persimilis]
          Length = 264

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|189234679|ref|XP_970167.2| PREDICTED: similar to pituitary homeobox1 [Tribolium castaneum]
          Length = 517

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G RS  D ++ ES  G D+ DG  G + D      R++R H  T QQ+QELE+ F    +
Sbjct: 134 GSRSLSDPIKTESGVGVDSTDGDDGKN-DKKTKRQRRQRTH-FTSQQLQELEATFARNRY 191

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           PD   R E++    L   +V+ WF+NRR + +
Sbjct: 192 PDMSTREEIAMWTNLTEARVRVWFKNRRAKWR 223


>gi|242049932|ref|XP_002462710.1| hypothetical protein SORBIDRAFT_02g030660 [Sorghum bicolor]
 gi|241926087|gb|EER99231.1| hypothetical protein SORBIDRAFT_02g030660 [Sorghum bicolor]
          Length = 243

 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE 194
           K   R + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ QLE
Sbjct: 32  KNKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 195 RHENSLLRQENDKLRAENMSIR 216
           R E S LR + D L     S++
Sbjct: 92  R-EYSALRDDYDALLCSYESLK 112


>gi|195570283|ref|XP_002103138.1| GD20268 [Drosophila simulans]
 gi|194199065|gb|EDX12641.1| GD20268 [Drosophila simulans]
          Length = 631

 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 430 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 489

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 490 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 526


>gi|195045512|ref|XP_001991987.1| GH24457 [Drosophila grimshawi]
 gi|193892828|gb|EDV91694.1| GH24457 [Drosophila grimshawi]
          Length = 264

 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|194742540|ref|XP_001953759.1| GF17922 [Drosophila ananassae]
 gi|190626796|gb|EDV42320.1| GF17922 [Drosophila ananassae]
          Length = 596

 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 391 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 450

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 451 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 487


>gi|297850974|ref|XP_002893368.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
 gi|297339210|gb|EFH69627.1| ATHB23 [Arabidopsis lyrata subsp. lyrata]
          Length = 256

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 20/167 (11%)

Query: 64  NSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASG 123
           N+ GL+   +   + N    +    ++ + F G +G+RS  + ++     G  N+D  +G
Sbjct: 4   NNNGLAFFPENFTLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQ-----GFCNLD-MNG 57

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           D+  + D     ++  R   +Q++ LE  F+     +  ++LEL++ L L+ RQ+  WFQ
Sbjct: 58  DEEYSDDGSKMGEKKRRLNMEQLKALEKNFELGNKLESDRKLELARALGLQPRQIAIWFQ 117

Query: 184 NRRTQMKT-QLE-------------RHENSLLRQENDKLRAENMSIR 216
           NRR + KT QLE             R+EN +L+ +N KL+A+ M+++
Sbjct: 118 NRRARSKTKQLEKDYDMLKRQFESLRNENEVLQTQNQKLQAQVMALK 164


>gi|195480036|ref|XP_002101113.1| GE17435 [Drosophila yakuba]
 gi|194188637|gb|EDX02221.1| GE17435 [Drosophila yakuba]
          Length = 264

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|226496749|ref|NP_001148520.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|195619978|gb|ACG31819.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
 gi|413922242|gb|AFW62174.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 272

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 16/102 (15%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT 
Sbjct: 75  PEKKR--RLTAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 132

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMR 220
           QLE   + L             L  +ND LRA+ +S+ + ++
Sbjct: 133 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQVISLTEKLQ 174


>gi|195393244|ref|XP_002055264.1| GJ19274 [Drosophila virilis]
 gi|194149774|gb|EDW65465.1| GJ19274 [Drosophila virilis]
          Length = 269

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|307189638|gb|EFN73976.1| Protein gooseberry [Camponotus floridanus]
          Length = 574

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 118 MDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           + G+SGDD D    P     RK+R  R   T +Q+++LE+ F    +PD   R EL+++ 
Sbjct: 166 LAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPDVYTREELAQKT 225

Query: 172 CLETRQVKFWFQNRRTQMKTQL 193
            L   +V+ WF NRR +++ QL
Sbjct: 226 KLTEARVQVWFSNRRARLRKQL 247


>gi|15148920|gb|AAK84887.1|AF402606_1 homeodomain leucine zipper protein HDZ3 [Phaseolus vulgaris]
          Length = 224

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 24/127 (18%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KK  HR + +Q+  LE  F+E    + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 4   PEKK--HRLSSEQVHLLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 61

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRN--------PICTNCGGP 230
           QLER  + L             L ++N+KL++E +S+ + +++        P       P
Sbjct: 62  QLERDFDVLKSSYDTLLSSYDSLMKDNEKLKSEVVSLNEKLQDQAKEVPEEPFYDKKVDP 121

Query: 231 AIIGDIS 237
             + DI+
Sbjct: 122 LPVEDIA 128


>gi|1076569|pir||S51929 homeotic protein CHB5 - carrot
          Length = 96

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 56/83 (67%), Gaps = 4/83 (4%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R   +Q++ LE  F+     + +++++L++ L L+ RQ+  WFQNRR + KT QL
Sbjct: 4   KKR--RLNLEQVKALEKSFELGNKLEPERKVQLARALGLQPRQIAIWFQNRRARWKTKQL 61

Query: 194 ERHENSLLRQENDKLRAENMSIR 216
           ER + ++L+++ D L+A+N S+R
Sbjct: 62  ER-DYTILKRQFDALKADNDSLR 83


>gi|59939333|gb|AAX12425.1| Dbuz\abd-A-PB [Drosophila buzzatii]
          Length = 536

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 332 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 391

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 392 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 428


>gi|90110436|gb|ABD90520.1| class III homeodomain-leucine zipper [Marchantia polymorpha]
          Length = 860

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 17/88 (19%)

Query: 137 RYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
           +Y R+T +Q++ LE ++ ECP P   +R +L K  C     +E +Q+K WFQNRR + K 
Sbjct: 17  KYVRYTNEQVEALERVYNECPKPSSIRRQQLIKD-CPILANIEPKQIKVWFQNRRCREKQ 75

Query: 192 QLERHE-----------NSLLRQENDKL 208
           + E              N LL +EN++L
Sbjct: 76  RKEATRLLSVNAKPTALNKLLMEENERL 103



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 23/185 (12%)

Query: 392 NGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGAL 451
           +G    A+R  G+V +    + + L D   W  +  C   R        +G GGT    +
Sbjct: 214 HGCAGVAARACGLVGLEPTKVADVLKDRPAW--LRDCR--RLDVLGAFPTGNGGT----V 265

Query: 452 QLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA------FVN 505
           +L++ ++   + L P R+   LR+     +G   + + S+       GAP       FV 
Sbjct: 266 ELIYTQMYAPTTLAPARDFCALRYTSFLEDGNLVICERSLSG---AHGAPTMPPVQFFVR 322

Query: 506 CRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISG------MGFGAQRWVA 559
              LPSG +++    G   +  V+H + +   V ++ +PL  S       M  GA R + 
Sbjct: 323 AEMLPSGYLIRPCEGGGCIIHIVDHMDLEPWSVPEVLRPLYESSAVLAQKMTMGALRHLR 382

Query: 560 TLQRQ 564
            L ++
Sbjct: 383 RLAQE 387


>gi|18396130|ref|NP_564268.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
 gi|75155843|sp|Q8LFD3.1|ATB23_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-23; AltName:
           Full=HD-ZIP protein ATHB-23; AltName: Full=Homeodomain
           transcription factor ATHB-23
 gi|21537134|gb|AAM61475.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|32815953|gb|AAP88361.1| At1g26960 [Arabidopsis thaliana]
 gi|110736089|dbj|BAF00017.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|332192643|gb|AEE30764.1| homeobox-leucine zipper protein ATHB-23 [Arabidopsis thaliana]
          Length = 255

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 22/174 (12%)

Query: 64  NSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASG 123
           N+ GL+   +  ++ N    +    ++ + F G +G+RS  + ++     G  N+D  +G
Sbjct: 4   NNNGLAFFPENFSLQNHHQEEEDHPQLLQDFHGFLGKRSPMNNVQ-----GFCNLD-MNG 57

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           D+  + D     ++  R   +Q++ LE  F+     +  ++LEL++ L L+ RQ+  WFQ
Sbjct: 58  DEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQ 117

Query: 184 NRRTQMKT-QLE-------------RHENSLLRQENDKLRAENMSIRDAMRNPI 223
           NRR + KT QLE             R EN +L+ +N KL+A+ M+++   R PI
Sbjct: 118 NRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKS--REPI 169


>gi|198469287|ref|XP_001354978.2| GA10896 [Drosophila pseudoobscura pseudoobscura]
 gi|198146800|gb|EAL32034.2| GA10896 [Drosophila pseudoobscura pseudoobscura]
          Length = 264

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|50556204|ref|XP_505510.1| YALI0F16852p [Yarrowia lipolytica]
 gi|49651380|emb|CAG78319.1| YALI0F16852p [Yarrowia lipolytica CLIB122]
          Length = 850

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           +  ++NP  +K+   H   Q++ LE +F E P P  K R EL + L L  + ++ WFQNR
Sbjct: 270 IPVSNNPAPRKKLSEH---QLRVLEKVFNETPKPCLKTRTELERDLDLPKKNIQIWFQNR 326

Query: 186 RTQMKTQLERHENSL 200
           R + K  +++ E  L
Sbjct: 327 RAKEKQNIKKREGEL 341


>gi|195107232|ref|XP_001998219.1| GI23753 [Drosophila mojavensis]
 gi|193914813|gb|EDW13680.1| GI23753 [Drosophila mojavensis]
          Length = 529

 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 325 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 384

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 385 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 421


>gi|24647534|ref|NP_732176.1| abdominal A, isoform B [Drosophila melanogaster]
 gi|1708230|sp|P29555.2|ABDA_DROME RecName: Full=Homeobox protein abdominal-A
 gi|969083|gb|AAA84405.1| ABD-AII [Drosophila melanogaster]
 gi|23171502|gb|AAF55360.2| abdominal A, isoform B [Drosophila melanogaster]
          Length = 590

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 389 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 448

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 449 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 485


>gi|195349268|ref|XP_002041167.1| GM15405 [Drosophila sechellia]
 gi|194122772|gb|EDW44815.1| GM15405 [Drosophila sechellia]
          Length = 588

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 387 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 446

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 447 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 483


>gi|295913252|gb|ADG57884.1| transcription factor [Lycoris longituba]
          Length = 188

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           PP KKR  R T  Q+Q LE  F+     + +++++L+K L L+ RQV  WFQNRR + KT
Sbjct: 63  PPEKKR--RLTANQVQFLEKSFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKT 120

Query: 192 QLERHENSLLRQENDKLRA--ENM 213
           +    +   L+   + L+A  ENM
Sbjct: 121 KQLEKDYETLKSSYNVLKADYENM 144


>gi|17136422|ref|NP_476693.1| abdominal A, isoform A [Drosophila melanogaster]
 gi|281361946|ref|NP_001163632.1| abdominal A, isoform C [Drosophila melanogaster]
 gi|386765930|ref|NP_001247145.1| abdominal A, isoform D [Drosophila melanogaster]
 gi|7523|emb|CAA38321.1| homeobox protein [Drosophila melanogaster]
 gi|969084|gb|AAA84406.1| ABD-AI [Drosophila melanogaster]
 gi|7300194|gb|AAF55359.1| abdominal A, isoform A [Drosophila melanogaster]
 gi|54650674|gb|AAV36916.1| RE04174p [Drosophila melanogaster]
 gi|220953476|gb|ACL89281.1| abd-A-PA [synthetic construct]
 gi|272477023|gb|ACZ94928.1| abdominal A, isoform C [Drosophila melanogaster]
 gi|383292756|gb|AFH06463.1| abdominal A, isoform D [Drosophila melanogaster]
          Length = 330

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 129 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 188

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 189 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 225


>gi|198453096|ref|XP_002137595.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
 gi|198132210|gb|EDY68153.1| GA26453 [Drosophila pseudoobscura pseudoobscura]
          Length = 560

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 363 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 422

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 423 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 459


>gi|321475838|gb|EFX86800.1| putative homeotic abdominal-A protein [Daphnia pulex]
          Length = 383

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 221 PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 280

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRN 221
           L       +++ N++ R E      ++RN
Sbjct: 281 LR-----AVKEINEQARREREEQESSIRN 304


>gi|18308158|gb|AAL67848.1| MOX-2 homeobox [Gallus gallus]
          Length = 154

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 107 LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +E E RSG   SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 8   VETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 66

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 67  RYEIAVNLDLTERQVKVWFQNRRMKWK 93


>gi|24640656|ref|NP_572500.1| CG11294, isoform A [Drosophila melanogaster]
 gi|442615563|ref|NP_001259352.1| CG11294, isoform B [Drosophila melanogaster]
 gi|7290965|gb|AAF46405.1| CG11294, isoform A [Drosophila melanogaster]
 gi|66571256|gb|AAY51593.1| IP01065p [Drosophila melanogaster]
 gi|440216555|gb|AGB95195.1| CG11294, isoform B [Drosophila melanogaster]
          Length = 261

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|72094725|ref|XP_796340.1| PREDICTED: retinal homeobox protein Rx2-like [Strongylocentrotus
           purpuratus]
          Length = 315

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 12/108 (11%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRK-------KRYHR----HTPQQIQ 147
           GR+S          SG +   G  GD + A D  PR+       KR  R      P+Q++
Sbjct: 29  GRKSYSPQSHRVCSSGKEAASGGKGDGVGADDLEPREENTWSDSKRNRRIRTTFNPEQLR 88

Query: 148 ELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 195
           ELE++F+   +PD K R ELS +  L  ++++ WFQNRR + + + ER
Sbjct: 89  ELENVFQVTHYPDVKTRDELSSKTSLPEQRIQIWFQNRRAKWR-KFER 135


>gi|194900573|ref|XP_001979830.1| GG16810 [Drosophila erecta]
 gi|190651533|gb|EDV48788.1| GG16810 [Drosophila erecta]
          Length = 592

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 389 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 448

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 449 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 485


>gi|413922241|gb|AFW62173.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 154

 Score = 55.8 bits (133), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 16/93 (17%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT 
Sbjct: 61  PEKKR--RLTAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 118

Query: 192 QLERHENSL-------------LRQENDKLRAE 211
           QLE   + L             L  +ND LRA+
Sbjct: 119 QLETDYDRLKAAYDALAADHQGLLADNDNLRAQ 151


>gi|195500182|ref|XP_002097264.1| GE26127 [Drosophila yakuba]
 gi|194183365|gb|EDW96976.1| GE26127 [Drosophila yakuba]
          Length = 590

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 389 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 448

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 449 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 485


>gi|194890930|ref|XP_001977409.1| GG19028 [Drosophila erecta]
 gi|190649058|gb|EDV46336.1| GG19028 [Drosophila erecta]
          Length = 264

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|195146386|ref|XP_002014167.1| GL23002 [Drosophila persimilis]
 gi|194103110|gb|EDW25153.1| GL23002 [Drosophila persimilis]
          Length = 562

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 365 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 424

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 425 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 461


>gi|195394383|ref|XP_002055823.1| abd-A [Drosophila virilis]
 gi|194142532|gb|EDW58935.1| abd-A [Drosophila virilis]
          Length = 522

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 315 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 374

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 375 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 411


>gi|158702234|gb|ABW77448.1| homeobox protein HoxA11ab [Salmo salar]
          Length = 292

 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 5/92 (5%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G+  RED    ES SG++    +S ++        RKKR   +T  QI+ELE  F    +
Sbjct: 190 GKEPREDTSSPESSSGNNEEKSSSSNNGQRT----RKKRCP-YTKYQIRELEREFFFSVY 244

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            ++++RL+LS+ L L  RQVK WFQNRR + K
Sbjct: 245 INKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 276


>gi|395334861|gb|EJF67237.1| homeobox-domain-containing protein [Dichomitus squalens LYAD-421
           SS1]
          Length = 550

 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 3/66 (4%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           KK  HRH P Q+  L  L+ +  HP  ++R  L++RL +ET+ V  WFQN+R   K   +
Sbjct: 32  KKPRHRHAPHQLAALNELYDKTEHPSLEERTALAERLGMETKTVNSWFQNKRASSK---K 88

Query: 195 RHENSL 200
           RH+  L
Sbjct: 89  RHKAPL 94


>gi|410934539|gb|AFV93986.1| homeodomain-containing protein Hox12, partial [Branchiostoma
           lanceolatum]
          Length = 129

 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 110 ESRSGSDNMDGASGD----DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRL 165
           +S+ G D  DG+  D    D+      PRKKR   ++  Q+ ELE  F    +   +QR 
Sbjct: 23  DSKKG-DTADGSEADPNGTDVWWKLQSPRKKRCP-YSKVQLLELEKEFLYNMYITREQRG 80

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           E+++++ L  RQVK WFQNRR +MK   +RHE    R
Sbjct: 81  EIARKVNLTDRQVKIWFQNRRMKMKRMKQRHEEEAFR 117


>gi|356509807|ref|XP_003523637.1| PREDICTED: homeobox-leucine zipper protein HOX19-like [Glycine max]
          Length = 290

 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 9/124 (7%)

Query: 98  IGRRSREDL-LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKEC 156
           I +R RE L LE E  S S +       D+D   NP +K R    T +Q   LE  FKE 
Sbjct: 104 IIKREREQLELEVEKISLSRDFV-----DVDENGNPKKKLRL---TKEQSAVLEDSFKEH 155

Query: 157 PHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIR 216
                KQ+ EL+K+L L TRQV+ WFQNRR + K +    E  LL++  + L  EN  + 
Sbjct: 156 YTISPKQKQELAKKLNLRTRQVEVWFQNRRARTKLKQTEVERELLKKCCETLTEENKMLE 215

Query: 217 DAMR 220
             ++
Sbjct: 216 KELQ 219


>gi|208401106|gb|ACI26669.1| NK-like homeobox protein 1b [Capitella teleta]
          Length = 165

 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQR 164
           D++E +   G D  DG+  D  D     PR+ R    T +Q+  LE+ FK+  +    +R
Sbjct: 6   DMIEDDGEEGEDKGDGS--DLQDGGRGKPRRAR-TAFTYEQLVALENKFKQTRYLSVCER 62

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           L L+  L L   QVK WFQNRRT+ K Q
Sbjct: 63  LNLALSLNLTETQVKIWFQNRRTKWKKQ 90


>gi|224069752|ref|XP_002326405.1| predicted protein [Populus trichocarpa]
 gi|222833598|gb|EEE72075.1| predicted protein [Populus trichocarpa]
          Length = 121

 Score = 55.5 bits (132), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 5/95 (5%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           D + + ++  +KKR    T  Q++ LE  F+E    D  ++++LS+ L L+ RQ+  WFQ
Sbjct: 21  DKITSYESQEKKKRL---TSDQLESLEKSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQ 77

Query: 184 NRRTQMKT-QLERHENSLLRQENDKLRAENMSIRD 217
           NRR + K  QLER  ++ L+QE D +  E   +++
Sbjct: 78  NRRARWKAKQLERLYDN-LKQEFDSVSKEKQKLQE 111


>gi|413934246|gb|AFW68797.1| putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 348

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 107 LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLE 166
           L  E +    +  G + DD + +      +R  R + +Q++ LE  F+     + +++ +
Sbjct: 89  LHAEPKQHQQDCGGGASDDEEGSAAAACGERKRRLSVEQVRTLERSFEVANKLEPERKAQ 148

Query: 167 LSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQENDKLRAENMSI 215
           L++ L L+ RQV  WFQNRR + KT QLE+  ++L RQ  D  RAEN ++
Sbjct: 149 LARALGLQPRQVAIWFQNRRARWKTKQLEKDYDALRRQL-DAARAENDAL 197


>gi|212722614|ref|NP_001132363.1| uncharacterized protein LOC100193808 [Zea mays]
 gi|194694188|gb|ACF81178.1| unknown [Zea mays]
          Length = 245

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE 194
           K   R + +Q + LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ QLE
Sbjct: 28  KNKKRFSDEQTKSLESMFATQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 87

Query: 195 RHENSLLRQENDKLRAENMSIRDAMR 220
           R E S LR +   L     S++D  R
Sbjct: 88  R-EYSALRDDYHALLCSYESLKDEKR 112


>gi|170054320|ref|XP_001863074.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167874594|gb|EDS37977.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 172

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)

Query: 120 GASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVK 179
           G +G     A+N  R+ R +  T +Q+ ELE LF+E  +PD   R ELS+RL L   +V+
Sbjct: 60  GHNGLASSLANNKQRRSRTN-FTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQ 118

Query: 180 FWFQNRRTQMKTQLERHENSL 200
            WFQNRR + +    +HEN L
Sbjct: 119 VWFQNRRAKCR----KHENQL 135


>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
           rubripes]
          Length = 285

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 17/121 (14%)

Query: 131 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           N  RK+R  R   T  Q++ELE +F E  +PD   R EL+ ++ L   +V+ WFQNRR +
Sbjct: 93  NEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 152

Query: 189 MKTQLE--------------RHENSLLRQENDKLRAENMSIRDAMRNPICT-NCGGPAII 233
            + Q                +  +S      D   A+  S      NP+ T NCGGP+  
Sbjct: 153 FRKQERAAAAAAAAAKSNSGKKSDSRDEDSKDAKSADPDSTGGPGPNPVPTSNCGGPSPT 212

Query: 234 G 234
           G
Sbjct: 213 G 213


>gi|166754|gb|AAA32816.1| homeobox protein, partial [Arabidopsis thaliana]
          Length = 100

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 16/99 (16%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 3   PEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 60

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRD 217
           QLER  + L             +  +NDKLR+E  S+ +
Sbjct: 61  QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTE 99


>gi|326516084|dbj|BAJ88065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 64/126 (50%), Gaps = 18/126 (14%)

Query: 99  GRRSREDLLE-HESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECP 157
           GRR R  L    E     D M G  G D    +N P +KR  R T +Q++ LE  F+E  
Sbjct: 46  GRRKRPFLTSPEEELQLDDEMYGYYGLD----ENAPERKR--RLTAEQVRALERSFEEEK 99

Query: 158 HPDEKQRL-ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR---AENM 213
              E +R  EL++RL +  RQV  WFQNRR + K +        L Q+ D LR   AE +
Sbjct: 100 RKLEPERKSELARRLGIAPRQVAVWFQNRRARWKAK-------QLEQDFDALRAAHAELL 152

Query: 214 SIRDAM 219
           + RDA+
Sbjct: 153 AGRDAL 158


>gi|4585806|emb|CAB40893.1| zerknuellt protein [Megaselia abdita]
          Length = 258

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 3/75 (4%)

Query: 123 GDDLDAADNPPRKKRYHR-HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           G D D   +P + KR     T  Q+ ELE+ FK+  + +  +R+E+S RL L  RQVK W
Sbjct: 39  GSDSDKTSSPAKTKRSRTAFTSIQLLELENEFKKNKYLNRPRRIEISLRLSLSERQVKIW 98

Query: 182 FQNRRTQMKTQLERH 196
           FQNRR  MK++ +R+
Sbjct: 99  FQNRR--MKSKKDRN 111


>gi|59939334|gb|AAX12426.1| Dbuz\abd-A-PA [Drosophila buzzatii]
          Length = 331

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 127 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 186

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 187 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 223


>gi|118488004|gb|ABK95823.1| unknown [Populus trichocarpa]
          Length = 314

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 16/102 (15%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DDLD   + P KKR  R T  Q+Q LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 75  DDLDEYFHQPEKKR--RLTVDQVQFLEKSFELENKLEPERKIQLAKDLGLQPRQVAIWFQ 132

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAE 211
           NRR + KT QLE+  + L             L +E +KL+AE
Sbjct: 133 NRRARWKTKQLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAE 174


>gi|444724600|gb|ELW65202.1| Short stature homeobox protein 2 [Tupaia chinensis]
          Length = 184

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query: 116 DNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           D  + A G + +      +++     T +Q+ ELE LF E  +PD   R ELS+RL L  
Sbjct: 50  DRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 109

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLL 201
            +V+ WFQNRR + + Q  +    +L
Sbjct: 110 ARVQVWFQNRRAKCRKQENQLHKGML 135


>gi|4262185|gb|AAD14502.1| putative DNA-binding protein [Arabidopsis thaliana]
          Length = 282

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 22/144 (15%)

Query: 94  FEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLF 153
           F G +G+RS  + ++     G  N+D  +GD+  + D     ++  R   +Q++ LE  F
Sbjct: 61  FLGFLGKRSPMNNVQ-----GFCNLD-MNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDF 114

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE-------------RHENS 199
           +     +  ++LEL++ L L+ RQ+  WFQNRR + KT QLE             R EN 
Sbjct: 115 ELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENE 174

Query: 200 LLRQENDKLRAENMSIRDAMRNPI 223
           +L+ +N KL+A+ M+++   R PI
Sbjct: 175 VLQTQNQKLQAQVMALKS--REPI 196


>gi|225425754|ref|XP_002276889.1| PREDICTED: homeobox-leucine zipper protein ATHB-13-like [Vitis
           vinifera]
          Length = 285

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 17/138 (12%)

Query: 92  ESFEGI---IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
           + F G+   +G+RS        S SG D  +  +G+D  + D     ++  R   +Q++ 
Sbjct: 39  QDFHGVASLLGKRSM-------SFSGIDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKT 91

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQ---- 203
           LE  F+     + +++++L++ L L+ RQ+  WFQNRR + KT QLE+  + L RQ    
Sbjct: 92  LEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAV 151

Query: 204 --ENDKLRAENMSIRDAM 219
             END L+A+N  +   M
Sbjct: 152 KAENDALQAQNQKLHAEM 169


>gi|116783318|gb|ABK22889.1| unknown [Picea sitchensis]
          Length = 300

 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 12/120 (10%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPR---KKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           S SG+ N+      + D +D+ P    KKR  R T +Q++ LE  F+     D +++++L
Sbjct: 5   SYSGAMNLSEHDIGEEDGSDDCPHFGEKKR--RLTIEQVKTLEKSFELRNKLDPERKMQL 62

Query: 168 SKRLCLETRQVKFWFQNRRTQMKT-QLE------RHENSLLRQENDKLRAENMSIRDAMR 220
           +K L L  RQ+  WFQNRR + KT Q+E      +HE   LR+  D L  +N   +D ++
Sbjct: 63  AKALGLHQRQISVWFQNRRARWKTKQMEKNFAVLKHEYETLRRNYDILFQKNRQFKDEVQ 122


>gi|340714415|ref|XP_003395724.1| PREDICTED: short stature homeobox protein 2-like [Bombus
           terrestris]
          Length = 384

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 24/151 (15%)

Query: 52  SSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES 111
           S +P P+S+    SP   + L+    +     DL+LQ         + R   +   + ES
Sbjct: 124 SPSPPPISRDRSASPENCVELKSQASNEAKSSDLKLQSQ-------VSRSLMQG--QEES 174

Query: 112 RSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSK 169
             GS+  +  +G+          K+R  R   T +Q+ ELE LF E  +PD   R ELS+
Sbjct: 175 TKGSNCRNSGNGNG---------KQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQ 225

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           RL L   +V+ WFQNRR + +    +HE+ L
Sbjct: 226 RLGLSEARVQVWFQNRRAKCR----KHESQL 252


>gi|195451407|ref|XP_002072904.1| GK13853 [Drosophila willistoni]
 gi|194168989|gb|EDW83890.1| GK13853 [Drosophila willistoni]
          Length = 582

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D +  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 376 DFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 435

Query: 185 RRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRN 221
           RR ++K +L   +    +   D+   E M  ++ M++
Sbjct: 436 RRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKS 472


>gi|402224643|gb|EJU04705.1| hypothetical protein DACRYDRAFT_114058 [Dacryopinax sp. DJM-731
           SS1]
          Length = 660

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           AS   +   ++P  K++  R TP+Q+  LE LF     P   +R E+S  L +  RQ + 
Sbjct: 109 ASSVSVAHPEDPSPKRKRSRVTPEQLTRLEELFASDRSPTVSRRKEISAELGMRERQTQI 168

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAM 219
           WFQNRR + K Q  R +    +    K R  +++  ++M
Sbjct: 169 WFQNRRAKAKVQEGRGKPRTKKSSAGKNRRTDVASPESM 207


>gi|328703501|ref|XP_003242223.1| PREDICTED: retinal homeobox protein Rx1-like [Acyrthosiphon pisum]
          Length = 302

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 14/127 (11%)

Query: 112 RSGSDNMDGASGDDL------DAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQ 163
           +S  D +  ASG D       +  D+ PRK R  R   T  Q+ +LE  F++  +PD   
Sbjct: 33  QSKLDALYAASGTDPSLHRSDEHDDDKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFT 92

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPI 223
           R EL+ RL L   +V+ WFQNRR + +    + E S+ R+ N  +    +   D +  P+
Sbjct: 93  REELALRLDLSEARVQVWFQNRRAKWR----KREKSMGRESNPYIPDHTLFRNDCL--PV 146

Query: 224 CTNCGGP 230
               GGP
Sbjct: 147 APTLGGP 153


>gi|328714903|ref|XP_001946558.2| PREDICTED: short stature homeobox protein 2-like [Acyrthosiphon
           pisum]
          Length = 330

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 118 MDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
            DG+  ++    + P  K+R  R   T +Q+ ELE LF E  +PD   R ELS+RL L  
Sbjct: 131 FDGSKNNNSKQLNGPSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 190

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLLRQEN 205
            +V+ WFQNRR + +    +    L+  +N
Sbjct: 191 ARVQVWFQNRRAKCRKHESQMHKGLMMHQN 220


>gi|297828596|ref|XP_002882180.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328020|gb|EFH58439.1| homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 268

 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 16/115 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+     +  ++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 64  PEKKR--RLTTEQVHLLEKSFETENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTK 121

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
           QLER  + L             + ++NDKLR+E  S+ + ++    T    P ++
Sbjct: 122 QLERDYDLLKSTYDQLLSNYDSIVKDNDKLRSEVTSLTEKLQGKEETANEPPGLV 176


>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
          Length = 285

 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%)

Query: 116 DNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           D  +    +D DA     +++     T +Q+ ELE LF E  +PD   R ELS+RL L  
Sbjct: 91  DKKEDVKSEDEDAQSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 150

Query: 176 RQVKFWFQNRRTQMKTQ 192
            +V+ WFQNRR + + Q
Sbjct: 151 ARVQVWFQNRRAKCRKQ 167


>gi|356505302|ref|XP_003521430.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Glycine max]
          Length = 218

 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 7/89 (7%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           K++  R T  QI+ LE  F+E    D +++++LS+ L L+ RQ+  WFQNRRT+ KT QL
Sbjct: 56  KEKKKRLTNNQIELLERSFQEEIKLDPERKMKLSRELGLQPRQIAVWFQNRRTRWKTKQL 115

Query: 194 E------RHENSLLRQENDKLRAENMSIR 216
           E      +H+  ++  E  KL+ E M ++
Sbjct: 116 EHLYDVLKHQYDVVSNEKQKLQEEVMKLK 144


>gi|308044467|ref|NP_001183573.1| uncharacterized protein LOC100502166 [Zea mays]
 gi|238013152|gb|ACR37611.1| unknown [Zea mays]
 gi|414886411|tpg|DAA62425.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 239

 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE 194
           K   R + +QI+ LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ QLE
Sbjct: 30  KNKKRFSEEQIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 89

Query: 195 RHENSLLRQENDKLRAENMSIR 216
           R + S LR + D L     S++
Sbjct: 90  R-DYSALRDDYDALLCSYESLK 110


>gi|195425783|ref|XP_002061148.1| GK10326 [Drosophila willistoni]
 gi|194157233|gb|EDW72134.1| GK10326 [Drosophila willistoni]
          Length = 278

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|226532120|ref|NP_001149510.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
 gi|195627676|gb|ACG35668.1| homeodomain-leucine zipper transcription factor TaHDZipI-1 [Zea
           mays]
          Length = 244

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE 194
           K   R + +Q + LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ QLE
Sbjct: 28  KNKKRFSDEQTKSLESMFATQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 87

Query: 195 RHENSLLRQENDKLRAENMSIRDAMR 220
           R E S LR +   L     S++D  R
Sbjct: 88  R-EYSALRDDYHALLCSYESLKDEKR 112


>gi|168021319|ref|XP_001763189.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685672|gb|EDQ72066.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1129

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 34/42 (80%)

Query: 543 KPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTGI 584
           + L+ SGM FGAQRWVATL+RQCE +A L++++++ RD  G+
Sbjct: 697 RELVGSGMAFGAQRWVATLERQCERVASLLASNIAPRDLGGV 738


>gi|296086402|emb|CBI31991.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 17/138 (12%)

Query: 92  ESFEGI---IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
           + F G+   +G+RS        S SG D  +  +G+D  + D     ++  R   +Q++ 
Sbjct: 34  QDFHGVASLLGKRSM-------SFSGIDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKT 86

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQ---- 203
           LE  F+     + +++++L++ L L+ RQ+  WFQNRR + KT QLE+  + L RQ    
Sbjct: 87  LEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAV 146

Query: 204 --ENDKLRAENMSIRDAM 219
             END L+A+N  +   M
Sbjct: 147 KAENDALQAQNQKLHAEM 164


>gi|232266|sp|P29556.1|ABDA_SCHGR RecName: Full=Homeobox protein abdominal-A homolog
 gi|1335663|emb|CAA38485.1| abdominal-A homologue [Schistocerca gregaria]
          Length = 157

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 5   PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 64

Query: 193 LE-----RHENSLLRQENDKLR 209
           L        +    R+E D+L+
Sbjct: 65  LRAVKEINEQARREREEQDRLK 86


>gi|355570187|gb|EHH25603.1| hypothetical protein EGK_21477, partial [Macaca mulatta]
          Length = 120

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L   +V+ WFQ
Sbjct: 15  EDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 74

Query: 184 NRRTQMKTQLER-HENSLLRQEN--DKLRAENMSIRDAMRNP 222
           NRR + + Q  + H+  +L   N  D  R        A+R P
Sbjct: 75  NRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMP 116


>gi|350399127|ref|XP_003485430.1| PREDICTED: short stature homeobox protein 2-like [Bombus impatiens]
          Length = 384

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 24/151 (15%)

Query: 52  SSTPQPLSKSMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHES 111
           S +P P+S+    SP   + L+    +     DL+LQ         + R   +   + ES
Sbjct: 124 SPSPPPISRDRSASPENCVELKSQASNETKSSDLKLQSQ-------VSRSLMQG--QEES 174

Query: 112 RSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSK 169
             GS+  +  +G+          K+R  R   T +Q+ ELE LF E  +PD   R ELS+
Sbjct: 175 TKGSNCRNSGNGNG---------KQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQ 225

Query: 170 RLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           RL L   +V+ WFQNRR + +    +HE+ L
Sbjct: 226 RLGLSEARVQVWFQNRRAKCR----KHESQL 252


>gi|226505158|ref|NP_001146068.1| uncharacterized protein LOC100279599 [Zea mays]
 gi|219885547|gb|ACL53148.1| unknown [Zea mays]
 gi|414870569|tpg|DAA49126.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 270

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 21/148 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT 
Sbjct: 75  PEKKR--RLTAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 132

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           QLE   + L             L  +ND LRA+ + + + ++    T+        ++  
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQVICLTEKLQGKE-TSLSATIAAQEVDQ 191

Query: 239 EEQHL----RIENARLKDELDRVCALAG 262
             +H     ++   +LKD+L   C   G
Sbjct: 192 PNEHTTGTEKLLAQQLKDDLHSSCGCTG 219


>gi|194704070|gb|ACF86119.1| unknown [Zea mays]
 gi|414590027|tpg|DAA40598.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 244

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLE 194
           K   R + +Q + LES+F      + +Q+L+L++ L L+ RQV  WFQN+R + K+ QLE
Sbjct: 28  KNKKRFSDEQTKSLESMFATQAKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLE 87

Query: 195 RHENSLLRQENDKLRAENMSIRDAMR 220
           R E S LR +   L     S++D  R
Sbjct: 88  R-EYSALRDDYHALLCSYESLKDEKR 112


>gi|77748087|gb|AAI07619.1| Short stature homeobox [Danio rerio]
          Length = 258

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 42/77 (54%)

Query: 116 DNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           D  +    +D DA     +++     T +Q+ ELE LF E  +PD   R ELS+RL L  
Sbjct: 91  DKKEDVKSEDEDAQSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 150

Query: 176 RQVKFWFQNRRTQMKTQ 192
            +V+ WFQNRR + + Q
Sbjct: 151 ARVQVWFQNRRAKCRKQ 167


>gi|295798066|emb|CBL87030.1| ptx protein [Tribolium castaneum]
          Length = 276

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G RS  D ++ ES  G D+ DG  G + D      R++R H  T Q++QELE+ F    +
Sbjct: 15  GSRSLSDPIKTESGVGVDSTDGDDGKN-DKKTKRQRRQRTH-FTSQRLQELEATFARNRY 72

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           PD   R E++    L   +V+ WF+NRR + +
Sbjct: 73  PDMSTREEIAMWTNLTEARVRVWFKNRRAKWR 104


>gi|87295439|gb|ABD37016.1| abdominal-A [Artemia sinica]
          Length = 101

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRETYTRYQTLELEKEFDFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L----ERHENSLLRQENDKLRAENMSIRDA 218
           L    E +E +   +E  +L+  + S  D 
Sbjct: 64  LRAVKEINEQARKDREEQELKIRSSSSDDG 93


>gi|189234030|ref|XP_967102.2| PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum]
          Length = 254

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRL 165
           E + +   DN+  +    L ++     K+R  R   T +Q+ ELE LF E  +PD   R 
Sbjct: 31  EDQEKVSEDNLSKSRHSVLGSSGKATTKQRRSRTNFTLEQLNELERLFDETHYPDAFMRE 90

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           ELS+RL L   +V+ WFQNRR + +    +HE+ +
Sbjct: 91  ELSQRLGLSEARVQVWFQNRRAKCR----KHESQI 121


>gi|358255529|dbj|GAA57221.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
          Length = 838

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 135 KKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           KK  HR T    Q+  LE+ F  CP+PD   R +++ RL L   +V+ WFQNRR + + Q
Sbjct: 228 KKARHRTTFSVHQLSILEAAFDSCPYPDAVTREDIASRLALSESRVQVWFQNRRAKWRKQ 287

Query: 193 LERH 196
              H
Sbjct: 288 ENGH 291


>gi|449451247|ref|XP_004143373.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
 gi|449482562|ref|XP_004156324.1| PREDICTED: putative homeobox-leucine zipper protein ATHB-51-like
           [Cucumis sativus]
          Length = 165

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 8/112 (7%)

Query: 136 KRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLER 195
           ++  R +  Q++ LE  F+E    D  ++++LSK L L+ RQ+  WFQNRR + KT+   
Sbjct: 9   QKKKRLSQDQLEALERSFQEEVKLDPDRKMKLSKELGLQPRQIAVWFQNRRARWKTKQLE 68

Query: 196 HENSLLRQEND-------KLRAENMSIRDAMRNPICTNCGGPAIIGDISLEE 240
           H    L+Q+ D        L+ E M +R  +R     N G  A   D+S EE
Sbjct: 69  HLYDTLKQQFDTISKEKHNLQQEVMKLRSMLREQTTRNQGSMAHT-DVSGEE 119


>gi|405952781|gb|EKC20551.1| Aristaless-related homeobox protein [Crassostrea gigas]
          Length = 193

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 135 KKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           KK  HR T  P Q++E+E  F++ P+PD   R EL++RL L   +V+ WFQNRR + +
Sbjct: 35  KKPRHRTTFSPFQLKEMEKAFRKAPYPDVMTREELARRLALNESRVQIWFQNRRAKWR 92


>gi|34304665|gb|AAQ63438.1| Hox12 [Oikopleura dioica]
          Length = 60

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           RKKR   +T  QIQELE+ F+       +QR E+S+RL L  RQVK WFQNRR + K
Sbjct: 2   RKKR-RPYTKLQIQELETEFRRTEFVTREQRQEISRRLNLTDRQVKIWFQNRRMKEK 57


>gi|432114786|gb|ELK36541.1| Visual system homeobox 1 [Myotis davidii]
          Length = 221

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 125 DLDAADNP-PRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           DL  + NP  RKKR HR   T QQ++ELE  F E  +PD   R  L+ +  L   +++ W
Sbjct: 14  DLKVSPNPGKRKKRRHRTVFTNQQLEELEKAFSEAHYPDVYAREMLAMKTELPEDRIQVW 73

Query: 182 FQNRRTQMKTQLER 195
           FQNRR + + Q +R
Sbjct: 74  FQNRRAKWRKQEKR 87


>gi|226493195|ref|NP_001140555.1| uncharacterized protein LOC100272620 [Zea mays]
 gi|194690356|gb|ACF79262.1| unknown [Zea mays]
 gi|194699966|gb|ACF84067.1| unknown [Zea mays]
 gi|219887213|gb|ACL53981.1| unknown [Zea mays]
 gi|408690264|gb|AFU81592.1| HB-type transcription factor, partial [Zea mays subsp. mays]
 gi|414885871|tpg|DAA61885.1| TPA: putative homeobox DNA-binding and leucine zipper domain family
           protein [Zea mays]
          Length = 261

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 23/144 (15%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R + +Q++ LE  F+     + +++  L++ L L+ RQV  WFQNRR + KT QL
Sbjct: 48  KKR--RLSSEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 105

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER + S LRQ  D LR ++    DA+R          A++ +I    + L+   A+L DE
Sbjct: 106 ER-DYSALRQSYDALRHDH----DALRR------DKDALLAEI----KELK---AKLGDE 147

Query: 254 LDRVCALAGKFLGRPVSSMGPPPM 277
                A        P +S GPPP+
Sbjct: 148 --EAAASFTSVKAEPAASDGPPPV 169


>gi|148283407|gb|ABQ57284.1| hox20, partial [Oryza sativa Indica Group]
          Length = 152

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 4/83 (4%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R + +Q++ LE  F+     + +++  L++ L L+ RQV  WFQNRR + KT QL
Sbjct: 39  KKR--RLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 96

Query: 194 ERHENSLLRQENDKLRAENMSIR 216
           ER + + LRQ  D LRA++ ++R
Sbjct: 97  ER-DYAALRQSYDALRADHDALR 118


>gi|449280281|gb|EMC87609.1| Homeobox protein MOX-2 [Columba livia]
          Length = 302

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 107 LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +E E RSG   SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 156 VETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 214

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 215 RYEIAVNLDLTERQVKVWFQNRRMKWK 241


>gi|213515130|ref|NP_001133037.1| homeobox protein HoxA11ab [Salmo salar]
 gi|157816055|gb|ABV82046.1| homeobox protein HoxA11ab [Salmo salar]
          Length = 291

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 6/92 (6%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G+  RED    ES SG++    +S +         RKKR   +T  QI+ELE  F    +
Sbjct: 190 GKEPREDTSSPESSSGNNEEKSSSSNGQRT-----RKKRCP-YTKYQIRELEREFFFSVY 243

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            ++++RL+LS+ L L  RQVK WFQNRR + K
Sbjct: 244 INKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 275


>gi|6093720|sp|P56673.1|PITX1_CHICK RecName: Full=Pituitary homeobox 1; AltName: Full=Homeobox protein
           PITX1; AltName: Full=Paired-like homeodomain
           transcription factor 1; AltName: Full=cPTX1
          Length = 311

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%)

Query: 74  QPNIDNQGGGDLQLQRMGES---FEGIIGRRSREDLLEHE-SRSGSDNMDGASGDD--LD 127
           +P   +       LQR  E     E      S  D+ E E S S     DG +G      
Sbjct: 18  RPQPSHDMASSFHLQRSSEPRDPIENSASESSDTDVPEKERSESRKTREDGGAGSAGCTG 77

Query: 128 AADNPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           AAD+P +KK+  R     T QQ+QELE+ F+   +PD   R E++    L   +V+ WF+
Sbjct: 78  AADDPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFK 137

Query: 184 NRRTQMKTQLERHE 197
           NRR + + + ER++
Sbjct: 138 NRRAKWRKR-ERNQ 150


>gi|357147780|ref|XP_003574482.1| PREDICTED: homeobox-leucine zipper protein HOX5-like [Brachypodium
           distachyon]
          Length = 276

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 14/99 (14%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           +++  R T +Q+Q LE  F E    + +++ EL++RL +  RQV  WFQNRR + K  QL
Sbjct: 74  QEKKRRLTAEQVQMLERSFGEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKNKQL 133

Query: 194 ERHENSL-------------LRQENDKLRAENMSIRDAM 219
           E+  + L             L  +ND+LRA+ +S+ D +
Sbjct: 134 EQDFDRLKAAYDALAADHHGLLSDNDRLRAQVISLTDKL 172


>gi|1032372|gb|AAA79778.1| homeodomain protein [Helianthus annuus]
          Length = 236

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 75/162 (46%), Gaps = 22/162 (13%)

Query: 91  GESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELE 150
           G SF     +R RE +   ES  G +N  G   +D D   N  +K R    T  Q   LE
Sbjct: 55  GSSFSIASAKRERE-VPSEESERGGENTSGE--EDEDGGVNGKKKLRL---TKAQSGLLE 108

Query: 151 SLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ--------LER------H 196
             FK     + KQ+ EL++ L L  RQV+ WFQNRR + K +        L+R       
Sbjct: 109 EAFKLHTTLNPKQKQELARDLKLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCNTLTD 168

Query: 197 ENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAI--IGDI 236
           EN  LRQE  +L+A+ +S    M+ P  T    P+   IGD 
Sbjct: 169 ENQRLRQEVQELKAQKVSPALYMQLPTTTLTVCPSCEQIGDT 210


>gi|342320109|gb|EGU12052.1| Proteophosphoglycan 5 [Rhodotorula glutinis ATCC 204091]
          Length = 639

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)

Query: 113 SGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           S S+   GA GD      +P + K   R + QQ++ LE  F+  P PD   R +LS+ L 
Sbjct: 201 SHSNPSAGADGDFTQTFYDPFKVKHRRRTSAQQLKVLEHHFEINPKPDLATRKKLSEVLE 260

Query: 173 LETRQVKFWFQNRRTQMKTQLER 195
           +  R+V+ WFQNRR ++K   ER
Sbjct: 261 MTPREVQVWFQNRRAKVKKLKER 283


>gi|328713660|ref|XP_001942974.2| PREDICTED: protein gooseberry-like [Acyrthosiphon pisum]
          Length = 440

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 8/105 (7%)

Query: 100 RRSREDLLEHESRSGSDNMDGASGDDLDAADNP----PRKKRYHR--HTPQQIQELESLF 153
           R  R D L++ S  G   +  +S DD D    P     RK+R  R   T +Q+++LE  F
Sbjct: 144 RGGRRDELKNHSIDGI--LGPSSADDSDTESEPGFHLKRKQRRSRTTFTGEQLEDLERAF 201

Query: 154 KECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHEN 198
            +  +PD   R EL+++  L   +V+ WF NRR +++ Q+  H++
Sbjct: 202 HKSQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQMGTHQH 246


>gi|134035510|gb|ABO47743.1| homeobox protein [Gossypium hirsutum]
          Length = 275

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%)

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR 170
           S SG D  +   GDD  + D     ++  R   +Q++ LE  F+     + +++++L+K 
Sbjct: 52  SFSGVDKSEEVHGDDELSDDGSHLGEKKKRLNLEQVKALEKSFELGNKLEPERKVQLAKA 111

Query: 171 LCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQ------ENDKLRAENMSI 215
           L L+ RQ+  WFQNRR + KT QLE+  ++L +Q      +ND L+A+N  +
Sbjct: 112 LGLQPRQIAIWFQNRRARWKTKQLEKDYDALKKQFEALKADNDALQAQNKKL 163


>gi|326921833|ref|XP_003207159.1| PREDICTED: homeobox protein MOX-2-like [Meleagris gallopavo]
          Length = 302

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 107 LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +E E RSG   SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 156 VETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 214

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 215 RYEIAVNLDLTERQVKVWFQNRRMKWK 241


>gi|347972377|ref|XP_003436886.1| AGAP004662-PB [Anopheles gambiae str. PEST]
 gi|333467596|gb|EGK96614.1| AGAP004662-PB [Anopheles gambiae str. PEST]
          Length = 370

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           S+  D     D    +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL 
Sbjct: 181 SNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 240

Query: 175 TRQVKFWFQNRRTQMKTQL----ERHENSLL-RQENDKLRAENM 213
            RQ+K WFQNRR ++K +L    E +E +   R+E DK++ E++
Sbjct: 241 ERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNESL 284


>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
          Length = 495

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 32/170 (18%)

Query: 71  ALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAAD 130
           A Q P  + +GG +       E +E     +  ED L  E     +N DG   D+    D
Sbjct: 247 AEQMPGQEAEGGPE-------EHYEDPFCPKRSEDCLSPE-LPACNNSDGKLSDE----D 294

Query: 131 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
            P +K R +R   T  Q+ ELE  F++  +PD   R EL+ ++ L   +V+ WFQNRR +
Sbjct: 295 QPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK 354

Query: 189 MKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT--NCGGPAIIGDI 236
            + Q             +KL   +M ++D+   PI +      P+ IG I
Sbjct: 355 WRRQ-------------EKLEVTSMKLQDS---PILSFNRSPQPSTIGTI 388


>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
 gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
          Length = 516

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 130 DNPPRKKRYHRHT--PQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           DN  RK+R +R T    Q+ ELE +F    +PD   R EL++R+ L   +V+ WFQNRR 
Sbjct: 184 DNGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRA 243

Query: 188 QMKTQ 192
           + + Q
Sbjct: 244 KWRKQ 248


>gi|113120207|gb|ABI30251.1| Rx1 [Nematostella vectensis]
          Length = 243

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 112 RSGSDNMDGASGDDLDA-ADNPP---RKKRYHR--HTPQQIQELESLFKECPHPDEKQRL 165
           RS  D+ D +   D  + ++NP    RK+R +R   T QQ+QELE +F++  +PD   R 
Sbjct: 40  RSYQDHPDQSHTPDHGSDSENPATVRRKQRRNRTTFTKQQLQELEKVFEKKHYPDIALRE 99

Query: 166 ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
           EL+ ++ +   +++ WFQNRR + + +L+   +SLL++  ++L  E +  +  +      
Sbjct: 100 ELAAKINISEARIQVWFQNRRAKWR-KLQNPNHSLLKK--NRLHHEKLQGQLPIAPRPGL 156

Query: 226 NCGGP 230
            CGGP
Sbjct: 157 PCGGP 161


>gi|387598540|gb|AFJ91926.1| homeodomain transcription factor Lox2, partial [Platynereis
           dumerilii]
          Length = 124

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           R++    +T  Q  ELE  FK   +   K+R+ELS  LCL  RQ+K WFQNRR + K ++
Sbjct: 42  RRRGRQTYTRYQTLELEKEFKFNRYLTRKRRIELSHMLCLTERQIKIWFQNRRMKEKKEI 101

Query: 194 E 194
           +
Sbjct: 102 Q 102


>gi|323388589|gb|ADX60099.1| HB homeobox transcription factor [Zea mays]
          Length = 279

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEK----QRLELSKRLCLETRQVKFWFQNRRTQM 189
           R +R  R T +QI+ LES F+   H   K    ++ EL++ L L+ RQV  WFQN+R + 
Sbjct: 55  RGERKRRFTEEQIRSLESTFR-ARHGHAKLEPREKAELARELGLQPRQVAIWFQNKRARW 113

Query: 190 KTQLERHENSLLRQENDKLRAENMSIR 216
           +++   H+ ++LR + D L A   S+R
Sbjct: 114 RSKQLEHDYAVLRAKFDDLHARVESLR 140


>gi|320170413|gb|EFW47312.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 112

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/63 (42%), Positives = 39/63 (61%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P  K+R  + + QQ++ELE LF   P P  + ++ LS+RL L  + V+ WFQNRR + K 
Sbjct: 19  PTSKRRRTQISEQQVRELEMLFDVDPWPSAEDKIALSRRLELSFQSVQVWFQNRRARAKR 78

Query: 192 QLE 194
           Q E
Sbjct: 79  QDE 81


>gi|53749672|ref|NP_001005427.1| homeobox protein MOX-2 [Gallus gallus]
 gi|14572594|emb|CAC42831.1| MOX-2 protein [Gallus gallus]
          Length = 302

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 107 LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +E E RSG   SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 156 VETEKRSGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 214

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 215 RYEIAVNLDLTERQVKVWFQNRRMKWK 241


>gi|87295437|gb|ABD37015.1| abdominal-A [Artemia sp. MaDuo]
          Length = 101

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGAQTYTRYQSLELEKEFHFIHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L----ERHENSLLRQENDKLR 209
           L    E +E +   +E  +L+
Sbjct: 64  LRAVKEINEQARKDREEQELK 84


>gi|194769256|ref|XP_001966722.1| GF19173 [Drosophila ananassae]
 gi|190618243|gb|EDV33767.1| GF19173 [Drosophila ananassae]
          Length = 281

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|187471154|sp|A2XDD6.2|HOX13_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX13; AltName:
           Full=HD-ZIP protein HOX13; AltName: Full=Homeodomain
           transcription factor HOX13; AltName: Full=OsHox13
 gi|218192229|gb|EEC74656.1| hypothetical protein OsI_10318 [Oryza sativa Indica Group]
          Length = 312

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 3/83 (3%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R   +Q++ LE  F      D  ++  +++ L L+ RQV  WFQNRR + KT QL
Sbjct: 72  KKR--RLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQL 129

Query: 194 ERHENSLLRQENDKLRAENMSIR 216
           ER   +L  Q ND LRA+  ++R
Sbjct: 130 ERDFAALRAQHNDALRADCDALR 152


>gi|347972379|ref|XP_003436887.1| AGAP004662-PC [Anopheles gambiae str. PEST]
 gi|333467597|gb|EGK96615.1| AGAP004662-PC [Anopheles gambiae str. PEST]
          Length = 307

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           S+  D     D    +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL 
Sbjct: 118 SNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 177

Query: 175 TRQVKFWFQNRRTQMKTQL----ERHENSLL-RQENDKLRAENM 213
            RQ+K WFQNRR ++K +L    E +E +   R+E DK++ E++
Sbjct: 178 ERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNESL 221


>gi|449469470|ref|XP_004152443.1| PREDICTED: homeobox-leucine zipper protein HAT5-like isoform 1
           [Cucumis sativus]
          Length = 339

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 21/157 (13%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +DLD   + P KKR  R T  Q++ LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 93  EDLDDYFHHPEKKR--RLTVDQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQ 150

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGG 229
           NRR + KT QLE+   +L             L +E D L+AE + + D + +       G
Sbjct: 151 NRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEILLLTDKLLHK--EKERG 208

Query: 230 PAIIGDISL---EEQHLRIENARLKDELDRVCALAGK 263
            +++ ++     E  H  + ++ L+DE+ +   L  K
Sbjct: 209 NSVLSEVDKFGEELPHNLVADSNLEDEVSKSSKLGCK 245


>gi|217035838|gb|ACJ74391.1| Hox12 [Branchiostoma lanceolatum]
          Length = 180

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 17/107 (15%)

Query: 112 RSGSDN----MDGASGDDLDAADNPP------------RKKRYHRHTPQQIQELESLFKE 155
           RSGS++     D   GD  D ++  P            RKKR   ++  Q+ ELE  F  
Sbjct: 63  RSGSEDSGCPKDSKKGDTADGSEADPNGTDVWWKLQSSRKKRCP-YSKVQLLELEKEFLY 121

Query: 156 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
             +   +QR E+++++ L  RQVK WFQNRR +MK   +RHE    R
Sbjct: 122 NMYITREQRGEIARKVNLTDRQVKIWFQNRRMKMKRMKQRHEEEAFR 168


>gi|158290042|ref|XP_311627.4| AGAP004662-PA [Anopheles gambiae str. PEST]
 gi|74764409|sp|O76762.1|ABDA_ANOGA RecName: Full=Homeobox protein abdominal-A homolog
 gi|3420838|gb|AAC31946.1| abdominal-A homeotic protein [Anopheles gambiae]
 gi|157018341|gb|EAA07261.6| AGAP004662-PA [Anopheles gambiae str. PEST]
          Length = 308

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           S+  D     D    +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL 
Sbjct: 119 SNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 178

Query: 175 TRQVKFWFQNRRTQMKTQL----ERHENSLL-RQENDKLRAENM 213
            RQ+K WFQNRR ++K +L    E +E +   R+E DK++ E++
Sbjct: 179 ERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMKNESL 222


>gi|330844803|ref|XP_003294302.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
 gi|325075256|gb|EGC29167.1| hypothetical protein DICPUDRAFT_159280 [Dictyostelium purpureum]
          Length = 486

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 104 EDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +DL    + +GS ++  ++GD   A      KK+  R +P+Q+  LE +F+    P ++ 
Sbjct: 177 QDLTSSVNTTGSFDLSASTGDL--AGSLSSNKKKRQRTSPEQLAILEQIFETDKMPSQQI 234

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R+ L+ +L + +R+V+ WFQN+R ++K
Sbjct: 235 RVRLANQLGMSSRRVQIWFQNKRAKVK 261


>gi|432901721|ref|XP_004076914.1| PREDICTED: homeobox protein vent1-like [Oryzias latipes]
          Length = 244

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 4/84 (4%)

Query: 113 SGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           S   +++  SG D DA   PPR+ R  + TP+QI +LE +F +  + D  +R++ +++L 
Sbjct: 105 SECHSVEDRSGVDKDA---PPRRVRT-KFTPKQILKLEKVFSKHKYLDAGERVKTAQKLN 160

Query: 173 LETRQVKFWFQNRRTQMKTQLERH 196
           L   QV+ WFQNRR ++K +++ H
Sbjct: 161 LSETQVRTWFQNRRMKLKREVQDH 184


>gi|340721873|ref|XP_003399338.1| PREDICTED: homeobox protein aristaless-like 4-like [Bombus
           terrestris]
          Length = 268

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|195118670|ref|XP_002003859.1| GI18136 [Drosophila mojavensis]
 gi|193914434|gb|EDW13301.1| GI18136 [Drosophila mojavensis]
          Length = 459

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 6/68 (8%)

Query: 135 KKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           K+R  R   T +Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +  
Sbjct: 235 KQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR-- 292

Query: 193 LERHENSL 200
             +HEN +
Sbjct: 293 --KHENQM 298


>gi|449469472|ref|XP_004152444.1| PREDICTED: homeobox-leucine zipper protein HAT5-like isoform 2
           [Cucumis sativus]
          Length = 334

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 21/157 (13%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +DLD   + P KKR  R T  Q++ LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 88  EDLDDYFHHPEKKR--RLTVDQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQ 145

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGG 229
           NRR + KT QLE+   +L             L +E D L+AE + + D + +       G
Sbjct: 146 NRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEILLLTDKLLHK--EKERG 203

Query: 230 PAIIGDISL---EEQHLRIENARLKDELDRVCALAGK 263
            +++ ++     E  H  + ++ L+DE+ +   L  K
Sbjct: 204 NSVLSEVDKFGEELPHNLVADSNLEDEVSKSSKLGCK 240


>gi|328779849|ref|XP_001120883.2| PREDICTED: homeobox protein aristaless-like 4-like [Apis mellifera]
          Length = 265

 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|342837528|dbj|BAK57345.1| pituitary homeobox 2 [Scyliorhinus torazame]
          Length = 338

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 102 SRED--LLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRH----TPQQIQELESLFKE 155
           SR+D  LL H   S     +  S +D    D+P +KKR  R     T QQ+QELE+ F+ 
Sbjct: 68  SRKDSKLLRHHLDSHEKEKNLQSKNDDSNTDDPSKKKRQRRQRTHFTSQQLQELEATFQR 127

Query: 156 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
             +PD   R E++    L   +V+ WF+NRR + + + ER++ + L
Sbjct: 128 NRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR-ERNQQAEL 172


>gi|297823473|ref|XP_002879619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325458|gb|EFH55878.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 179

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 51/86 (59%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           ++KR  + T +Q++ LE+ F+E    +  ++++LSK + L+ RQ+  WFQNR+ + K + 
Sbjct: 70  KEKRKKKMTSEQLKFLETSFQEEIKLNPDRKMKLSKEIGLQPRQIAVWFQNRKARWKNKQ 129

Query: 194 ERHENSLLRQENDKLRAENMSIRDAM 219
             H    LRQE D +  E   +++ +
Sbjct: 130 LEHLYESLRQEFDVVSREKELLQEEL 155


>gi|402910991|ref|XP_003918127.1| PREDICTED: homeobox protein ESX1 [Papio anubis]
          Length = 359

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 121 ASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           A G        PP +KR  R   T  Q+QELE+ F E  +PD   R  L+ RL L   +V
Sbjct: 122 AEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRV 181

Query: 179 KFWFQNRRTQMK 190
           + WFQNRR + K
Sbjct: 182 QVWFQNRRAKWK 193


>gi|149028356|gb|EDL83762.1| rCG37652 [Rattus norvegicus]
          Length = 205

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 199
           R++P+Q +ELE+ FK   +P  KQR  L++ +C+   Q++ WF+NRR++   +       
Sbjct: 105 RYSPEQKRELENFFKNSKYPSFKQRKMLAQSICVMENQIRIWFKNRRSKYFREHPEERQE 164

Query: 200 LLRQENDKLRAENMSIRDAMRNPICTNCGGPAII 233
             R +  +  A + S R      +  N G   +I
Sbjct: 165 AQRHQGGRAHAHHTSTRGH----VLINSGATVLI 194


>gi|410915108|ref|XP_003971029.1| PREDICTED: pituitary homeobox 1-like isoform 1 [Takifugu rubripes]
          Length = 315

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 17/121 (14%)

Query: 92  ESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRH----TPQQIQ 147
           ++ E      S  DL E E RS     D  + DD       P+KK+  R     T QQ+Q
Sbjct: 50  DTLENSSSESSDTDLAEKE-RSAEQRSDDGNADD-------PKKKKQRRQRTHFTSQQLQ 101

Query: 148 ELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-----QLERHENSLLR 202
           ELE+ F+   +PD   R E++    L   +V+ WF+NRR + +      Q++  +NS L 
Sbjct: 102 ELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQMDLCKNSYLP 161

Query: 203 Q 203
           Q
Sbjct: 162 Q 162


>gi|147809664|emb|CAN62385.1| hypothetical protein VITISV_011126 [Vitis vinifera]
          Length = 285

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 17/138 (12%)

Query: 92  ESFEGI---IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQE 148
           + F G+   +G+RS        S SG D  +  +G+D  + D     ++  R   +Q++ 
Sbjct: 39  QDFHGVASLLGKRSM-------SFSGIDVCEETNGEDDLSDDGSQAGEKKRRLNMEQVKT 91

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSLLRQ---- 203
           LE  F+     + ++++ L++ L L+ RQ+  WFQNRR + KT QLE+  + L RQ    
Sbjct: 92  LEKNFELGNKLEPERKMXLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAV 151

Query: 204 --ENDKLRAENMSIRDAM 219
             END L+A+N  +   M
Sbjct: 152 KAENDALQAQNQKLHAEM 169


>gi|350412866|ref|XP_003489794.1| PREDICTED: homeobox protein aristaless-like 4-like isoform 1
           [Bombus impatiens]
          Length = 268

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|224045199|ref|XP_002188132.1| PREDICTED: homeobox protein MOX-2 [Taeniopygia guttata]
          Length = 302

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 107 LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           +E E RSG   SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 156 VETEKRSGKRKSDSSDSQEGNYKTEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 214

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 215 RYEIAVNLDLTERQVKVWFQNRRMKWK 241


>gi|87295459|gb|ABD37026.1| abdominal-A [Artemia parthenogenetica]
          Length = 101

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|198419049|ref|XP_002125254.1| PREDICTED: similar to short stature homeobox [Ciona intestinalis]
          Length = 325

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 4/114 (3%)

Query: 89  RMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQI 146
           R+GE+ +  + R +++  +    R+ S ++        D +    +K+R  R   T +Q+
Sbjct: 100 RIGENTQ--VQRVTKQKQVTSSKRTTSYDVSDDVSVKSDGSTESAKKQRRSRTNFTMEQL 157

Query: 147 QELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
            ELE LF+E  +PD   R E+S RL L   +V+ WFQNRR + + Q  + +  L
Sbjct: 158 NELERLFEETHYPDAFMREEISSRLKLSEGRVQVWFQNRRAKCRKQESQMQKGL 211


>gi|170051656|ref|XP_001861864.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167872820|gb|EDS36203.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 268

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 6/85 (7%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTP------QQIQELESLFKECPHPDEKQRLELS 168
           +D+++G    DL       R+K+ +   P      +Q++ LE+ FK+  +    +RLELS
Sbjct: 114 TDSVNGFPSSDLYQKIGTKRRKQGNDRKPRQAYSAKQLERLETEFKQDKYLSVSKRLELS 173

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQL 193
           K L L   Q+K WFQNRRT+ K QL
Sbjct: 174 KSLSLTEVQIKTWFQNRRTKWKKQL 198


>gi|3024855|sp|Q90277.1|VSX1_CARAU RecName: Full=Visual system homeobox 1; AltName: Full=Homeobox
           protein VSX-1; AltName: Full=Transcription factor VSX1
 gi|460928|gb|AAC24600.1| Vsx-1 homeobox protein [Carassius auratus]
          Length = 341

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 107 LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQR 164
           LE +  + SD+ D  SGD  D  ++  RKKR HR   T  Q++ELE  F E  +PD   R
Sbjct: 120 LEQQRDAYSDD-DCLSGDRNDGKNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYAR 178

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQ 192
             L+ +  L   +++ WFQNRR + + +
Sbjct: 179 EMLAMKTELPEDRIQVWFQNRRAKWRKR 206


>gi|356512547|ref|XP_003524980.1| PREDICTED: uncharacterized protein LOC100799054 [Glycine max]
          Length = 331

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 16/117 (13%)

Query: 117 NMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           +MD    + +D   + P KKR  R +  Q+Q LE  F+E    + +++ +L+K L L+ R
Sbjct: 65  DMDDNGDECMDEYFHQPEKKR--RLSASQVQFLEKSFEEENKLEPERKTKLAKDLGLQPR 122

Query: 177 QVKFWFQNRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAM 219
           QV  WFQNRR + K  QLE+   +L             L +E DKL+AE  S+ + +
Sbjct: 123 QVAIWFQNRRARWKNKQLEKDYETLHASFESLKSNYDCLLKEKDKLKAEVASLTEKV 179


>gi|255552610|ref|XP_002517348.1| homeobox protein, putative [Ricinus communis]
 gi|223543359|gb|EEF44890.1| homeobox protein, putative [Ricinus communis]
          Length = 212

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 16/121 (13%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           DD    +  P KKR  R T +Q+  LE  F+E    + +++ +L+K+L ++ RQV  WFQ
Sbjct: 58  DDEYYDEQLPEKKR--RLTSEQVNLLEKSFEEENKLEPERKTQLAKKLGMQPRQVAVWFQ 115

Query: 184 NRRTQMKT-QLERH-------ENSLLR------QENDKLRAENMSIRDAMRNPICTNCGG 229
           NRR + KT QLER         +SLL       +EN KL++E +S+ + ++    T    
Sbjct: 116 NRRARWKTKQLERDYDVLKASYDSLLSDFDNTVKENQKLKSEVVSLTEKLQTKELTGATI 175

Query: 230 P 230
           P
Sbjct: 176 P 176


>gi|148706095|gb|EDL38042.1| mCG6339 [Mus musculus]
          Length = 273

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 9/104 (8%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 199
           R++P+Q   LE  FK+  +P  KQR EL+K +C+   Q++ WF+NRR +       H   
Sbjct: 131 RYSPEQKSTLEKFFKKSKYPSFKQRQELAKSVCVMEYQIRIWFKNRRARY---FREHPQE 187

Query: 200 LLRQENDKLRAENMSIRDAMRNPICTNCGGPAII--GDISLEEQ 241
            L+   ++    + S  D      C N G   +I  G+++   Q
Sbjct: 188 RLKARGNQGLGAHTSTGDH----ACINAGATVLIRPGELAARTQ 227


>gi|307200202|gb|EFN80496.1| ALX homeobox protein 1 [Harpegnathos saltator]
          Length = 268

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|356498166|ref|XP_003517924.1| PREDICTED: uncharacterized protein LOC100783970 [Glycine max]
          Length = 345

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 16/110 (14%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +D +   + P KKR  R T +Q+Q LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 75  EDYEGCFHQPGKKR--RLTSEQVQFLERNFEVENKLEPERKVQLAKELGLQPRQVAIWFQ 132

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAM 219
           NRR + KT QLE+    L             L QENDKL+AE  S+   +
Sbjct: 133 NRRARFKTKQLEKDYGVLKASYDRLKGDYESLVQENDKLKAEVNSLESKL 182


>gi|380011058|ref|XP_003689630.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis florea]
          Length = 266

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|87295445|gb|ABD37019.1| abdominal-A [Artemia sinica]
 gi|87295447|gb|ABD37020.1| abdominal-A [Artemia urmiana]
 gi|87295449|gb|ABD37021.1| abdominal-A [Artemia parthenogenetica]
 gi|87295451|gb|ABD37022.1| abdominal-A [Artemia parthenogenetica]
 gi|87295453|gb|ABD37023.1| abdominal-A [Artemia parthenogenetica]
 gi|87295461|gb|ABD37027.1| abdominal-A [Artemia parthenogenetica]
          Length = 101

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|87295463|gb|ABD37028.1| abdominal-A [Artemia parthenogenetica]
          Length = 101

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|383855091|ref|XP_003703052.1| PREDICTED: homeobox protein aristaless-like 4-like [Megachile
           rotundata]
          Length = 267

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|440907435|gb|ELR57586.1| Short stature homeobox protein, partial [Bos grunniens mutus]
          Length = 174

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
            D  D    +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L 
Sbjct: 5   KDKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 64

Query: 175 TRQVKFWFQNRRTQMKTQLERHENSLL 201
             + + WFQNRR + + Q E+ E SLL
Sbjct: 65  --EARVWFQNRRAKCRKQ-EKAEGSLL 88


>gi|147898431|ref|NP_001079055.1| paired-like homeodomain 2 [Xenopus laevis]
 gi|3955071|emb|CAA06697.1| XPtx2b [Xenopus laevis]
          Length = 316

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 109 HESRSGSDNMDGASGDDLDAADNPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQR 164
           H+S S  D    +  +D ++ D+P +KKR  R     T QQ+QELE+ F+   +PD   R
Sbjct: 58  HQSGSDKDKSHQSKNED-NSTDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR 116

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
            E++    L   +V+ WF+NRR + + +    +  L +
Sbjct: 117 EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQTELCK 154


>gi|403183386|gb|EAT33900.2| AAEL013832-PA [Aedes aegypti]
          Length = 418

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 7/112 (6%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
           S+  D     D    +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL 
Sbjct: 181 SNPFDRVVCGDFAGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLT 240

Query: 175 TRQVKFWFQNRRTQMKTQL----ERHENSLL-RQENDKLRAENMSIRDAMRN 221
            RQ+K WFQNRR ++K +L    E +E +   R+E DK++  N S++ A ++
Sbjct: 241 ERQIKIWFQNRRMKLKKELRAVKEINEQARREREEQDKMK--NDSLKSAQQH 290


>gi|255742430|gb|ACU32545.1| homeobox protein HoxA11 [Callorhinchus milii]
          Length = 293

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)

Query: 107 LEHESRSGSDNMDGASGDDLDAADNP----PRKKRYHRHTPQQIQELESLFKECPHPDEK 162
           +E E+  G  + + +SG++ + A N      RKKR   +T  QI+ELE  F    + +++
Sbjct: 191 VEKETSPGRSSPESSSGNNEEKASNSSGQRARKKRCP-YTKYQIRELEREFFFSVYINKE 249

Query: 163 QRLELSKRLCLETRQVKFWFQNRRTQMK 190
           +RL+LS+ L L  RQVK WFQNRR + K
Sbjct: 250 KRLQLSRMLNLTDRQVKIWFQNRRMKEK 277


>gi|193678843|ref|XP_001943352.1| PREDICTED: hypothetical protein LOC100162381 [Acyrthosiphon pisum]
          Length = 324

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 49/80 (61%), Gaps = 10/80 (12%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           P ++KR HR   T +Q+++LE+ F++  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 197 PAKRKRRHRTIFTEEQLEQLEATFEKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 256

Query: 190 KTQLERHENSLLRQENDKLR 209
           + Q         R+E D+LR
Sbjct: 257 RKQ--------RREEQDRLR 268


>gi|157117064|ref|XP_001658682.1| hypothetical protein AaeL_AAEL007831 [Aedes aegypti]
 gi|108876214|gb|EAT40439.1| AAEL007831-PA [Aedes aegypti]
          Length = 246

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELETLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|449487811|ref|XP_004157812.1| PREDICTED: LOW QUALITY PROTEIN: homeobox-leucine zipper protein
           HAT5-like [Cucumis sativus]
          Length = 334

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 21/157 (13%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +DLD   + P KKR  R T  Q++ LE  F+     + +++++L+K L L+ RQV  WFQ
Sbjct: 88  EDLDDYFHHPXKKR--RLTVDQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQ 145

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGG 229
           NRR + KT QLE+   +L             L +E D L+AE + + D + +       G
Sbjct: 146 NRRARWKTKQLEKDYEALQSSYGSLKVDYENLLKEKDSLKAEILLLTDKLLHK--EKERG 203

Query: 230 PAIIGDISL---EEQHLRIENARLKDELDRVCALAGK 263
            +++ ++     E  H  + ++ L+DE+ +   L  K
Sbjct: 204 NSVLSEVDKFGEELPHNLVADSNLEDEVSKSSKLGCK 240


>gi|45553381|ref|NP_996219.1| ultrabithorax, isoform F [Drosophila melanogaster]
 gi|45446510|gb|AAS65158.1| ultrabithorax, isoform F [Drosophila melanogaster]
          Length = 355

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +D   + N  R++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQ
Sbjct: 251 EDPTKSTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQ 310

Query: 184 NRRTQMKTQLE 194
           NRR ++K +++
Sbjct: 311 NRRMKLKKEIQ 321


>gi|307715374|gb|ADN88094.1| homeodomain-leucine zipper protein HD3 [Gossypium hirsutum]
          Length = 254

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 19/117 (16%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 47  PEKKR--RLTSEQVYLLEKSFEAENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTK 104

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD 235
           QLER  + L             + +EN+KL++E  S+ + ++     +    AI G+
Sbjct: 105 QLERDYDLLKSSFDSLQSNYDTILKENEKLKSEVASLTEKLQ---AKDVATEAIAGE 158


>gi|168038741|ref|XP_001771858.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676809|gb|EDQ63287.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 346

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 90  MGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNP--PRKKRYHRHTPQQIQ 147
           +G S E  I + S      H++       DG++ DD    D+P     ++  R T  Q++
Sbjct: 47  VGVSLEDTIVQGSGHKRPFHDACDTPTGEDGSAEDDEGGDDSPTGSHNEKKRRLTLDQVR 106

Query: 148 ELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QLERHENSL 200
            LE+ F+     + +++++L+K L L  RQV  WFQNRR + KT QLER   +L
Sbjct: 107 SLETSFEVVNKLEPEKKMQLAKELGLRPRQVAVWFQNRRARWKTKQLERDYETL 160


>gi|388493514|gb|AFK34823.1| unknown [Lotus japonicus]
          Length = 147

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 62/113 (54%), Gaps = 11/113 (9%)

Query: 116 DNMDGASGDDLDA---ADNPPRKKRY--------HRHTPQQIQELESLFKECPHPDEKQR 164
           +N+  + G+++++   +  PP+  R          R + +QI+ LE +F+     + +++
Sbjct: 6   ENIQASIGENVESFTCSLEPPQNSRKKNRKVENKRRFSDEQIRSLECIFESESKLEPRKK 65

Query: 165 LELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRD 217
           ++L+K L L+ RQV  WFQNRR + K++    E   L+ E D L +   S+++
Sbjct: 66  IQLAKDLGLQPRQVAIWFQNRRARWKSKRMEKEYRKLKDEYDNLASRFESLKE 118


>gi|302793704|ref|XP_002978617.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
 gi|300153966|gb|EFJ20603.1| hypothetical protein SELMODRAFT_108871 [Selaginella moellendorffii]
          Length = 128

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 121 ASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKF 180
           A  DDL         ++  R + +Q++ LE  F+     +  ++++L+K L L+ RQV  
Sbjct: 19  AGDDDLCDESIAQHVEKKRRLSVEQVKALEKNFEIENKLEPDRKIQLAKELGLQPRQVAV 78

Query: 181 WFQNRRTQMKTQLERHENSLLRQENDKLRAENMSI---RDAMR 220
           WFQNRR + KT+    +  LL+ E D L+A  + +   RD ++
Sbjct: 79  WFQNRRARWKTKQLEKDYDLLKSEYDDLKASYVDLAKERDKLQ 121


>gi|2708283|gb|AAB92402.1| abdominal-A, partial [Acanthokara kaputensis]
          Length = 90

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 5   PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKLKKE 64

Query: 193 LERHENSLLRQENDKLRAENMS 214
           L       +++ N++ R E+ +
Sbjct: 65  LRA-----VKEINEQARLESAT 81


>gi|350412869|ref|XP_003489795.1| PREDICTED: homeobox protein aristaless-like 4-like isoform 2
           [Bombus impatiens]
          Length = 254

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|321470925|gb|EFX81899.1| hypothetical protein DAPPUDRAFT_34773 [Daphnia pulex]
          Length = 67

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 5/66 (7%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR+ R +  T +Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +  
Sbjct: 4   PRRSRTN-FTLEQLAELERLFEETHYPDAYMREELSQRLGLSEARVQVWFQNRRAKCR-- 60

Query: 193 LERHEN 198
             +HE+
Sbjct: 61  --KHES 64


>gi|357141673|ref|XP_003572308.1| PREDICTED: homeobox-leucine zipper protein HOX20-like [Brachypodium
           distachyon]
          Length = 266

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 4/83 (4%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R + +Q++ LE  F++    + +++  L++ L L+ RQV  WFQNRR + KT QL
Sbjct: 51  KKR--RLSVEQVRALEVSFEKENKLEPERKARLARDLGLQPRQVAIWFQNRRARWKTKQL 108

Query: 194 ERHENSLLRQENDKLRAENMSIR 216
           ER + + LRQ  D LRA++ ++R
Sbjct: 109 ER-DYAALRQSFDALRADHDALR 130


>gi|351706647|gb|EHB09566.1| Visual system homeobox 1 [Heterocephalus glaber]
          Length = 299

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 105 DLLEHESRSGSDNMDGASGDDLDAADNP---PRKKRYHR--HTPQQIQELESLFKECPHP 159
           D L    R    + D  S D  D   +P    RKKR HR   T QQ++ELE  F E  +P
Sbjct: 73  DRLHRSDRDSESDEDSLSEDRSDLKASPGLGKRKKRRHRTVFTAQQLEELEKAFGEAHYP 132

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 204
           D   R  L+ +  L   +++ WFQNRR + + + +R   S +  E
Sbjct: 133 DVYAREMLALKTQLPEDRIQVWFQNRRAKWRKREKRWGGSSVMAE 177


>gi|109131769|ref|XP_001092145.1| PREDICTED: homeobox protein ESX1 [Macaca mulatta]
 gi|355705037|gb|EHH30962.1| hypothetical protein EGK_20785 [Macaca mulatta]
          Length = 361

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 121 ASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           A G        PP +KR  R   T  Q+QELE+ F E  +PD   R  L+ RL L   +V
Sbjct: 124 AEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRV 183

Query: 179 KFWFQNRRTQMK 190
           + WFQNRR + K
Sbjct: 184 QVWFQNRRAKWK 195


>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
          Length = 282

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 99  GRRSREDLLEHESRS---GSDNMDGAS-GDDLDAADNPPRKKRYHRH----TPQQIQELE 150
           GR ++E+  E+   S   GSD   GA  GDDL+       KK++ R+    T  Q+ ELE
Sbjct: 51  GRDAQENTGENSCNSTGGGSDEELGAGCGDDLNGNSG---KKKHRRNRTTFTTYQLHELE 107

Query: 151 SLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA 210
             F++  +PD   R EL+ ++ L   +V+ WFQNRR + + Q             +K+ A
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-------------EKMEA 154

Query: 211 ENMSIRDAMRNPICTNCGGPAI 232
             + + +        N  GPA+
Sbjct: 155 ARLGLSEYHHPGNMRNVAGPAL 176


>gi|357607811|gb|EHJ65696.1| hypothetical protein KGM_16361 [Danaus plexippus]
          Length = 310

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P RK R   ++ +Q++ LES FK   +    +RLELSK L L   Q+K WFQNRRT+ K 
Sbjct: 200 PERKPR-QAYSAKQLERLESEFKLDKYLSVSKRLELSKALGLTEVQIKTWFQNRRTKWKK 258

Query: 192 QL 193
           QL
Sbjct: 259 QL 260


>gi|356524118|ref|XP_003530679.1| PREDICTED: homeobox-leucine zipper protein HAT7-like [Glycine max]
          Length = 320

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 18/118 (15%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G +  +    +D     N P KKR  R T +Q+Q LES F+     + +++++L+K L +
Sbjct: 60  GLEKEENGEDEDFGVCLNQPGKKR--RLTSKQVQFLESNFEVENKLEPERKVQLAKELGM 117

Query: 174 ETRQVKFWFQNRRTQMKTQ---------------LERHENSLLRQENDKLRAENMSIR 216
           + RQV  WFQNRR + KT+               L+R  ++LL QE+DKL+ E  S++
Sbjct: 118 QPRQVAIWFQNRRARFKTKQLEKDYGVLKASYDVLKRDYDNLL-QESDKLKEEVNSLK 174


>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
          Length = 282

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 24/142 (16%)

Query: 99  GRRSREDLLEHESRS---GSDNMDGAS-GDDLDAADNPPRKKRYHRH----TPQQIQELE 150
           GR ++E+  E+   S   GSD   GA  GDDL+       KK++ R+    T  Q+ ELE
Sbjct: 51  GRDAQENAGENSCNSTGGGSDEELGAGCGDDLNGNSG---KKKHRRNRTTFTTYQLHELE 107

Query: 151 SLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRA 210
             F++  +PD   R EL+ ++ L   +V+ WFQNRR + + Q             +K+ A
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQ-------------EKMEA 154

Query: 211 ENMSIRDAMRNPICTNCGGPAI 232
             + + +        N  GPA+
Sbjct: 155 ARLGLSEYHHPGNMRNVAGPAL 176


>gi|194859821|ref|XP_001969458.1| GG23943 [Drosophila erecta]
 gi|190661325|gb|EDV58517.1| GG23943 [Drosophila erecta]
          Length = 419

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +    +HEN + +
Sbjct: 203 QLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMHK 256


>gi|109729930|tpg|DAA05779.1| TPA_inf: class III HD-Zip protein HDZ33 [Selaginella
           moellendorffii]
          Length = 812

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMK 190
           + +Y R+T +Q++ LE ++ ECP P   +R +L K       +  +Q+K WFQNRR + K
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREK 63

Query: 191 TQLERHENSLLRQENDKLRAEN 212
              +R E S L   N KL A N
Sbjct: 64  ---QRKETSRLHGLNSKLTALN 82



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 18/181 (9%)

Query: 398 ASRETGMVI-----INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           A+R  G+V      ++   +VE L D   W  ++ C   R+    + SS  G T    ++
Sbjct: 207 AARALGLVALEATRVSEWRIVEVLKDKTSW--LWDCR--RSDVIHICSSENGST----ME 258

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRL 509
           +MH +L   + L P R+   LR      +G   V + SI      S  P+   FV    L
Sbjct: 259 IMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVRAEML 318

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQ-LYKPLIISGMGFGAQRWVATLQRQCECL 568
            SG +V+    G   V  ++H +   S V + L +PL  S     AQR      R  + L
Sbjct: 319 TSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSS-SLLAQRMTVKALRFLKHL 377

Query: 569 A 569
           A
Sbjct: 378 A 378


>gi|302757763|ref|XP_002962305.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
 gi|300170964|gb|EFJ37565.1| hypothetical protein SELMODRAFT_77000 [Selaginella moellendorffii]
          Length = 821

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMK 190
           + +Y R+T +Q++ LE ++ ECP P   +R +L K       +  +Q+K WFQNRR + K
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREK 63

Query: 191 TQLERHENSLLRQENDKLRAEN 212
              +R E S L   N KL A N
Sbjct: 64  ---QRKETSRLHGLNSKLTALN 82



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 18/181 (9%)

Query: 398 ASRETGMVI-----INSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQ 452
           A+R  G+V      ++   +VE L D   W  ++ C   R+    + SS  G T    ++
Sbjct: 207 AARALGLVALEATRVSEWRIVEVLKDKTSW--LWDCR--RSDVIHICSSENGST----ME 258

Query: 453 LMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRL 509
           +MH +L   + L P R+   LR      +G   V + SI      S  P+   FV    L
Sbjct: 259 IMHTQLYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVRAEML 318

Query: 510 PSGCVVQDMPNGYSKVTWVEHAEYDESQVHQ-LYKPLIISGMGFGAQRWVATLQRQCECL 568
            SG +V+    G   V  ++H +   S V + L +PL  S     AQR      R  + L
Sbjct: 319 TSGYLVRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSS-SLLAQRMTVKALRFLKHL 377

Query: 569 A 569
           A
Sbjct: 378 A 378


>gi|194761770|ref|XP_001963098.1| GF14108 [Drosophila ananassae]
 gi|190616795|gb|EDV32319.1| GF14108 [Drosophila ananassae]
          Length = 387

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +    +HEN + +
Sbjct: 173 QLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMHK 226


>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
 gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
           anterior neural fold homeobox protein
 gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
 gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
 gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
 gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
           musculus]
          Length = 342

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 121 ASGDDLDAADNPPRKKRYHRH-----TPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           A+GD   + + PP+KK  HR      T  Q+ ELE  F++  +PD   R EL+ ++ L  
Sbjct: 120 AAGDSKLSEEEPPKKK--HRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPE 177

Query: 176 RQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDAMRNPICT 225
            +V+ WFQNRR + + Q E+ E S ++ ++  L + + S   +   P+ T
Sbjct: 178 VRVQVWFQNRRAKWRRQ-EKLEVSSMKLQDSPLLSFSRSPPSSALAPLGT 226


>gi|87295465|gb|ABD37029.1| abdominal-A [Artemia parthenogenetica]
 gi|87295467|gb|ABD37030.1| abdominal-A [Artemia parthenogenetica]
 gi|87295469|gb|ABD37031.1| abdominal-A [Artemia parthenogenetica]
          Length = 101

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
          Length = 636

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 16/105 (15%)

Query: 104 EDLLEHESRSGSDNMDGASGDDLDAADN-------PP-------RKKRYHR--HTPQQIQ 147
           +D  + + R G  +M GA G    +ADN       PP       RK+R +R   T  Q+ 
Sbjct: 188 DDHADGDGRDGIVDMSGAGGGQDASADNEDDCYGGPPSAGGTNKRKQRRYRTTFTSYQLD 247

Query: 148 ELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           ELE  F    +PD   R EL+ ++ L   +++ WFQNRR + + Q
Sbjct: 248 ELEKAFGRTHYPDVFTREELASKIGLTEARIQVWFQNRRAKWRKQ 292


>gi|169845134|ref|XP_001829287.1| hypothetical protein CC1G_06624 [Coprinopsis cinerea okayama7#130]
 gi|116509718|gb|EAU92613.1| hypothetical protein CC1G_06624 [Coprinopsis cinerea okayama7#130]
          Length = 614

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 35/57 (61%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           +KK  HRH P+Q+  L  LF++  HP    R  L++RL +ET+ V  WFQN+R   K
Sbjct: 27  QKKPRHRHAPEQLAALNELFEKDEHPPLDIRSALAERLGMETKTVNAWFQNKRASSK 83



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           D     N P+K R  R T +Q +EL+ L+   PHP  ++R  L++R+ +  + +  WFQN
Sbjct: 176 DESPESNMPKKMRM-RPTNEQTEELKKLYNSNPHPTAEERQALAERIGMRYQSITNWFQN 234

Query: 185 RRTQMK 190
           +R+  K
Sbjct: 235 QRSLAK 240


>gi|70778522|gb|AAZ08039.1| hbox10 [Xenopus (Silurana) tropicalis]
          Length = 569

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 109 HESRSGSDNMDGASGDDLDAADNPP-RKKRYHRHTPQQIQELESLFKECPHPDEKQRLEL 167
           +++  G D   G    D      PP RKK    ++  Q+QELE LF E  +PD ++R E+
Sbjct: 150 YDTGHGGDRQRGKCPADAPEEPGPPCRKKSRTLYSMDQLQELERLFAEDHYPDSEKRREI 209

Query: 168 SKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMS 214
           ++ + +  +++  WFQNRR + +    + E + ++     L A  MS
Sbjct: 210 AEIIGVTPQRIMVWFQNRRAKWR----KVEKTSIKGPRKPLSAAGMS 252


>gi|195473619|ref|XP_002089090.1| GE26064 [Drosophila yakuba]
 gi|194175191|gb|EDW88802.1| GE26064 [Drosophila yakuba]
          Length = 420

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +    +HEN + +
Sbjct: 203 QLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMHK 256


>gi|449463785|ref|XP_004149612.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Cucumis
           sativus]
 gi|449501583|ref|XP_004161408.1| PREDICTED: homeobox-leucine zipper protein HOX27-like [Cucumis
           sativus]
          Length = 256

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 17/141 (12%)

Query: 81  GGGDLQLQRMGESFEGI---IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKR 137
           GGG++     G S +GI   IG+ +RE+  + +S +  +  +     D++   +  +K R
Sbjct: 85  GGGEIG----GRSSKGIVWSIGKNNREEERKGKSENELEEEEEQEEMDMNMISSGRKKLR 140

Query: 138 YHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHE 197
             R   QQ   LE  FKE      KQ+LE+++RL L  RQV+ WFQNRR + K +    E
Sbjct: 141 LSR---QQSAFLEESFKEHHTLYPKQKLEVARRLNLRPRQVEVWFQNRRARTKLKQNEVE 197

Query: 198 NSLLR-------QENDKLRAE 211
              L+       Q+N KL+ E
Sbjct: 198 CEYLKKCCATLTQQNTKLQKE 218


>gi|15232122|ref|NP_186796.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
 gi|399900|sp|Q02283.1|HAT5_ARATH RecName: Full=Homeobox-leucine zipper protein HAT5; AltName:
           Full=HD-ZIP protein ATHB-1; AltName: Full=Homeodomain
           transcription factor ATHB-1; AltName:
           Full=Homeodomain-leucine zipper protein HAT5;
           Short=HD-ZIP protein 5
 gi|6016706|gb|AAF01532.1|AC009325_2 homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP
           protein ATHB-1) [Arabidopsis thaliana]
 gi|16329|emb|CAA41625.1| Athb-1 protein [Arabidopsis thaliana]
 gi|16648822|gb|AAL25601.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|20466121|gb|AAM19982.1| AT3g01470/F4P13_2 [Arabidopsis thaliana]
 gi|332640149|gb|AEE73670.1| homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]
          Length = 272

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 16/102 (15%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+  LE  F+     + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 66  PEKKR--RLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 123

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMR 220
           QLER  + L             +  +NDKLR+E  S+ + ++
Sbjct: 124 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQ 165


>gi|390351591|ref|XP_783280.3| PREDICTED: uncharacterized protein LOC577994 [Strongylocentrotus
           purpuratus]
          Length = 394

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 114 GSDNMDGASGDDLDAAD--NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRL 171
           GSD  +    DD D        RK+    +T  Q  ELE  F    +   K+R+E+++ +
Sbjct: 270 GSDTKENDVIDDCDGTHIIGTDRKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAV 329

Query: 172 CLETRQVKFWFQNRRTQMKTQLER 195
           CL  RQ+K WFQNRR + K +  R
Sbjct: 330 CLSERQIKIWFQNRRMKWKKERVR 353


>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
          Length = 360

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 9/94 (9%)

Query: 104 EDLLEHESRSGSDN---MDGASGDDLDAADNPPRKKRYHRHTPQ--QIQELESLFKECPH 158
           E++LE  +  G +N    DG +  D    DN  RK+R +R T    Q+ ELE +F    +
Sbjct: 88  ENILETSALDGRENGSPSDGTNSPD----DNGKRKQRRYRTTFSAFQLDELEKVFARTHY 143

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PD   R EL+ R+ L   +V+ WFQNRR + + Q
Sbjct: 144 PDVFTREELATRVQLTEARVQVWFQNRRAKYRKQ 177


>gi|307176314|gb|EFN65933.1| ALX homeobox protein 1 [Camponotus floridanus]
          Length = 240

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 15  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 65


>gi|224133286|ref|XP_002321530.1| predicted protein [Populus trichocarpa]
 gi|222868526|gb|EEF05657.1| predicted protein [Populus trichocarpa]
          Length = 268

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 16/103 (15%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
            DDLD   + P KKR  R T  Q+Q LE  F+     + +++++L+K L L+ RQV  WF
Sbjct: 28  DDDLDEYFHQPEKKR--RLTVDQVQFLEKSFELENKLEPERKIQLAKDLGLQPRQVAIWF 85

Query: 183 QNRRTQMKT-QLERHENSL-------------LRQENDKLRAE 211
           QNRR + KT QLE+  + L             L +E +KL+AE
Sbjct: 86  QNRRARWKTKQLEKDYDVLQSSYNSLKADYDNLLKEKEKLKAE 128


>gi|345486353|ref|XP_003425457.1| PREDICTED: hypothetical protein LOC100678407 [Nasonia vitripennis]
          Length = 286

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELESLF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 34  TPQQLQELESLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 84


>gi|334312722|ref|XP_003339772.1| PREDICTED: homeobox protein Nkx-2.4-like [Monodelphis domestica]
          Length = 513

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK-- 190
           PR+KR    +  Q+ ELE  FK+  +    +R  L+  + L   QVK WFQN R +MK  
Sbjct: 350 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ 409

Query: 191 -----TQLERHENSLLRQENDKLRAENMSIRD 217
                TQ  + ENSL +Q++ +  A  + ++D
Sbjct: 410 AKDKVTQQLQQENSLCQQQSPRRVAVPVLVKD 441


>gi|242049134|ref|XP_002462311.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
 gi|241925688|gb|EER98832.1| hypothetical protein SORBIDRAFT_02g023650 [Sorghum bicolor]
          Length = 317

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 24/233 (10%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRH-TPQQIQELESLFKECPHPDEKQRL-ELSKRL 171
           G D + G  G D +    P +++R  R  T +Q++ELE  F+E     E +R  EL++RL
Sbjct: 78  GDDELCG--GFDYELLHGPQQQERTKRRLTAEQVRELELSFEEEKRKLEPERKSELARRL 135

Query: 172 CLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL---RAENMSIRDAMRNPICTNCG 228
            +  RQV  WFQNRR + +T+    +   LR  +D L   R   ++  D +R+ + T   
Sbjct: 136 GIAPRQVAVWFQNRRARWRTKQLEQDFDRLRAAHDDLLAGRDALLADNDRLRSQVITLTE 195

Query: 229 GPAIIGDISLEEQHLRI---ENARLKDELDRVCALAGKFLGRPVSSMGPPPMPNSSLELG 285
                   + E +   +   E A    E D++C  +    G   S+    P  N S E  
Sbjct: 196 KLQAKESSASEPEEFTVATQETAYALFEEDKLCLCSEIATG---STAAAAPGSNDSPE-- 250

Query: 286 VGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERS 338
               + F G  S  ++  P D G G ++     +P        TG++ S+ER+
Sbjct: 251 ----SYFAGACSPPSS--PEDDGCGGADDRTFFLP---DALLATGVEESLERA 294


>gi|242073868|ref|XP_002446870.1| hypothetical protein SORBIDRAFT_06g024000 [Sorghum bicolor]
 gi|241938053|gb|EES11198.1| hypothetical protein SORBIDRAFT_06g024000 [Sorghum bicolor]
          Length = 270

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 134 RKKRYHRHTPQQIQELESLFK-ECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           R +R  R T +QI+ LES+F       + +++ EL++ L L+ RQV  WFQN+R + +++
Sbjct: 62  RGERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSK 121

Query: 193 LERHENSLLRQENDKLRAENMSIR 216
              H+ ++LR + D L A   S++
Sbjct: 122 QLEHDYAVLRAKFDDLHARVESLK 145


>gi|170029663|ref|XP_001842711.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167864030|gb|EDS27413.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 241

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELETLFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|312283295|dbj|BAJ34513.1| unnamed protein product [Thellungiella halophila]
          Length = 120

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 122 SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFW 181
           +G++  + D     ++  R   +Q++ LE  F+     +  ++LEL++ L L+ RQ+  W
Sbjct: 13  NGEEEFSDDGSKMGEKKRRLNMEQLKTLEKNFEIGNKLESDRKLELARALGLQPRQIAIW 72

Query: 182 FQNRRTQMKT-QLERHENSLLRQ------ENDKLRAENMSIRDAMRN 221
           FQNRR + KT QLER  ++L RQ      EN+ L+ +N  ++  + N
Sbjct: 73  FQNRRARSKTKQLERDYDALKRQFESLKDENEILQTQNQKLQAQVIN 119


>gi|87295443|gb|ABD37018.1| abdominal-A [Artemia sinica]
          Length = 101

 Score = 53.9 bits (128), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQTLELEKEFDFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
          Length = 161

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 5/95 (5%)

Query: 103 REDLLEH----ESRSGSDNMDGASGDDLDAADNPPRKKRYHR-HTPQQIQELESLFKECP 157
           +E+LL H    E + G D++  ++G D +      +++RY    T  Q++ELE  F++  
Sbjct: 18  KEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTH 77

Query: 158 HPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           +PD   R EL+ RL L   +V+ WFQNRR + + +
Sbjct: 78  YPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKR 112


>gi|395504575|ref|XP_003756623.1| PREDICTED: homeobox protein goosecoid [Sarcophilus harrisii]
          Length = 250

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 153 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 212

Query: 192 Q 192
           Q
Sbjct: 213 Q 213


>gi|302763605|ref|XP_002965224.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
 gi|300167457|gb|EFJ34062.1| hypothetical protein SELMODRAFT_167294 [Selaginella moellendorffii]
          Length = 778

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKR----LCLETRQVKFWFQNRRTQMK 190
           + +Y R+T +Q++ LE ++ ECP P   +R +L K       +  +Q+K WFQNRR + K
Sbjct: 4   QNKYARYTNEQLEILELVYNECPKPSSLRRQQLMKEAPILANIAPKQLKVWFQNRRCREK 63

Query: 191 TQLERHENSLLRQENDKLRAEN 212
              +R E S L   N KL A N
Sbjct: 64  ---QRKETSRLHGLNSKLTALN 82



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 13/176 (7%)

Query: 398 ASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMHAE 457
           A+R  G+V + +  +VE L D   W  ++ C   R+    + SS  G T    +++MH +
Sbjct: 178 AARALGLVALEATRIVEVLKDKTSW--LWDC--RRSDVIHICSSENGST----MEIMHTQ 229

Query: 458 LQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPA---FVNCRRLPSGCV 514
           L   + L P R+   LR      +G   V + SI      S  P+   FV    L SG +
Sbjct: 230 LYAPTTLAPPRDFCTLRLTTSLEDGNLVVCERSISDAECLSYVPSTQYFVRAEMLTSGYL 289

Query: 515 VQDMPNGYSKVTWVEHAEYDESQVHQ-LYKPLIISGMGFGAQRWVATLQRQCECLA 569
           V+    G   V  ++H +   S V + L +PL  S     AQR      R  + LA
Sbjct: 290 VRPCEGGSCIVHIIDHLDLKPSSVSEVLTRPLYRSS-SLLAQRMTVKALRFLKHLA 344


>gi|187936707|dbj|BAG32151.1| Hox14 homolog [Lethenteron camtschaticum]
          Length = 146

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PRKKR   ++ QQI ELE  F E      + RL +S RL L  RQVK WFQN+R + K  
Sbjct: 59  PRKKRVP-YSKQQISELERAFDENRFLTPELRLSISHRLSLTERQVKIWFQNQRQKEKKL 117

Query: 193 LERHEN 198
           + R ++
Sbjct: 118 MRRQQS 123


>gi|326920974|ref|XP_003206740.1| PREDICTED: homeobox protein goosecoid-like [Meleagris gallopavo]
          Length = 246

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 149 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 208

Query: 192 Q 192
           Q
Sbjct: 209 Q 209


>gi|126290304|ref|XP_001367970.1| PREDICTED: homeobox protein goosecoid-like [Monodelphis domestica]
          Length = 250

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 153 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 212

Query: 192 Q 192
           Q
Sbjct: 213 Q 213


>gi|87295435|gb|ABD37014.1| abdominal-A [Artemia sp. Kazakhstan HL-2005]
          Length = 101

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRQTYTRYQSLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L----ERHENSLLRQENDKLR 209
           L    E +E +   +E  +L+
Sbjct: 64  LRAVKEINEQARKDREEQELK 84


>gi|549889|gb|AAA56904.1| homeobox protein [Arabidopsis thaliana]
 gi|549890|gb|AAA56905.1| homeobox protein [Arabidopsis thaliana]
          Length = 315

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 29/145 (20%)

Query: 114 GSDNMDGA-SGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           GSD+ DG+ +GDD        RKK   R + +Q   LE  FKE    + KQ++ L+K+L 
Sbjct: 146 GSDDEDGSGNGDDSS------RKKL--RLSKEQALVLEETFKEHSTLNPKQKMALAKQLN 197

Query: 173 LETRQVKFWFQNRRTQMKTQ--------LER------HENSLLRQENDKLRAENMS--IR 216
           L TRQV+ WFQNRR + K +        L+R       EN  L++E  +LRA  +S  + 
Sbjct: 198 LRTRQVEVWFQNRRQRTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLY 257

Query: 217 DAMRNP----ICTNCGGPAIIGDIS 237
             M+ P    +C +C   A+    S
Sbjct: 258 MHMKPPTTLTMCPSCERVAVTSSPS 282


>gi|507132|gb|AAB04117.1| homeobox-containing protein [Ephydatia fluviatilis]
          Length = 164

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/84 (36%), Positives = 44/84 (52%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           G ++    SG+D D      RKK     + +Q+ ELE  F+   +    +R EL+++L L
Sbjct: 57  GRESTSSTSGNDADDDLLTRRKKARTAFSREQVAELEKKFQNKKYLSSTERGELAEKLKL 116

Query: 174 ETRQVKFWFQNRRTQMKTQLERHE 197
              QVK WFQNRR + K Q E  E
Sbjct: 117 SDMQVKTWFQNRRMKYKRQSEETE 140


>gi|195638278|gb|ACG38607.1| homeodomain leucine zipper protein CPHB-5 [Zea mays]
          Length = 270

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 21/148 (14%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T +Q+Q LE  F+E    + +++ EL++RL +  RQV  WFQNRR + KT 
Sbjct: 75  PEKKR--RLTAEQVQLLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTK 132

Query: 192 QLERHENSL-------------LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISL 238
           QLE   + L             L  +ND LRA+ + + + ++    T+        ++  
Sbjct: 133 QLETDYDRLKAAYNALAADHQGLLADNDSLRAQVICLTEKLQGKE-TSLSATIAAQEVDQ 191

Query: 239 EEQHL----RIENARLKDELDRVCALAG 262
             +H     +    +LKD+L   C   G
Sbjct: 192 PNEHTTGTEKXLAQQLKDDLHSSCGCTG 219


>gi|451810332|dbj|BAM84188.1| abdominal-A, partial [Tenebrio molitor]
          Length = 150

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 24  PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 83

Query: 193 L 193
           L
Sbjct: 84  L 84


>gi|242014140|ref|XP_002427754.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212512201|gb|EEB15016.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 153

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 26  PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 85

Query: 193 L 193
           L
Sbjct: 86  L 86


>gi|194758609|ref|XP_001961554.1| GF14876 [Drosophila ananassae]
 gi|190615251|gb|EDV30775.1| GF14876 [Drosophila ananassae]
          Length = 496

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 360 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 419

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 420 RKQ-KREEQERLRK 432


>gi|87295441|gb|ABD37017.1| abdominal-A [Artemia sinica]
          Length = 101

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 4   PRRRGRETYTRYQTLELEKEFDFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 63

Query: 193 L 193
           L
Sbjct: 64  L 64


>gi|388490558|gb|AFK33345.1| unknown [Medicago truncatula]
          Length = 304

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 127 DAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           D  DNP RKK   R T +Q   LE  FK+    + KQ+ EL+ +L L TRQV+ WFQNRR
Sbjct: 137 DVNDNPIRKKL--RPTKEQSAVLEDTFKDHSTLNPKQKQELASKLNLGTRQVEVWFQNRR 194

Query: 187 TQMKTQ 192
            + K +
Sbjct: 195 ARTKVK 200


>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
          Length = 546

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 17/108 (15%)

Query: 89  RMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR----HTPQ 144
           R   S +GI+G RS        S S SD      G D+D+    P K++  R     T +
Sbjct: 186 RTKHSIDGILGDRS--------SASHSDE-----GSDVDSEPGLPLKRKQRRSRTTFTAE 232

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           Q++ELE  F+   +PD   R EL++R  L   +V+ WF NRR + + Q
Sbjct: 233 QLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ 280


>gi|313233933|emb|CBY10101.1| unnamed protein product [Oikopleura dioica]
          Length = 419

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           P+K+     TP+QI+ LE+ F +  +    +R+ELSK L L   Q+K WFQNRRT+ K
Sbjct: 196 PKKRPRTAFTPEQIKRLEAEFSKNKYLSVAKRMELSKALNLTETQIKIWFQNRRTKWK 253


>gi|125807005|ref|XP_001360225.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
 gi|195149359|ref|XP_002015625.1| GL10922 [Drosophila persimilis]
 gi|54635396|gb|EAL24799.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
 gi|194109472|gb|EDW31515.1| GL10922 [Drosophila persimilis]
          Length = 216

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
            SD    A  D L   D   +++     T  Q+ ELE +F E  +PD   R E++ +L L
Sbjct: 90  NSDFHLKAYDDGLSLTDKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHL 149

Query: 174 ETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
              +V+ WFQNRR + + Q ERH   +++ ++ K+
Sbjct: 150 TEARVQVWFQNRRAKFRKQ-ERHAIYIMKDKSVKM 183


>gi|340727729|ref|XP_003402190.1| PREDICTED: homeobox protein abdominal-A homolog isoform 2 [Bombus
           terrestris]
          Length = 399

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 12/99 (12%)

Query: 125 DLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQN 184
           + D  +  PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQN
Sbjct: 264 EFDGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQN 323

Query: 185 RRTQMKTQL------------ERHENSLLRQENDKLRAE 211
           RR ++K +L            ER E  +++++  + +A+
Sbjct: 324 RRMKLKKELRAVKEINEQARREREEQDMMKKQQAEKQAK 362


>gi|221330585|ref|NP_001137762.1| goosecoid, isoform B [Drosophila melanogaster]
 gi|220901896|gb|ACL82969.1| goosecoid, isoform B [Drosophila melanogaster]
          Length = 485

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 348 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 407

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 408 RKQ-KREEQERLRK 420


>gi|1708053|sp|P54366.1|GSC_DROME RecName: Full=Homeobox protein goosecoid
 gi|1177383|emb|CAA64699.1| gsc [Drosophila melanogaster]
 gi|1399587|gb|AAB17948.1| goosecoid [Drosophila melanogaster]
          Length = 419

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 342 RKQ-KREEQERLRK 354


>gi|357533773|gb|AET82940.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533775|gb|AET82941.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533777|gb|AET82942.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533779|gb|AET82943.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533781|gb|AET82944.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533783|gb|AET82945.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533785|gb|AET82946.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533787|gb|AET82947.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533789|gb|AET82948.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533791|gb|AET82949.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533793|gb|AET82950.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533795|gb|AET82951.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533797|gb|AET82952.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533799|gb|AET82953.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533801|gb|AET82954.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533805|gb|AET82956.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533807|gb|AET82957.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533809|gb|AET82958.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533811|gb|AET82959.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533813|gb|AET82960.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533815|gb|AET82961.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533817|gb|AET82962.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533819|gb|AET82963.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533821|gb|AET82964.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533823|gb|AET82965.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533825|gb|AET82966.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533827|gb|AET82967.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533829|gb|AET82968.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533831|gb|AET82969.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533833|gb|AET82970.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533835|gb|AET82971.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533837|gb|AET82972.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533839|gb|AET82973.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533841|gb|AET82974.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533843|gb|AET82975.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533845|gb|AET82976.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533847|gb|AET82977.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533849|gb|AET82978.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533851|gb|AET82979.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533853|gb|AET82980.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533857|gb|AET82982.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533859|gb|AET82983.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533861|gb|AET82984.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533863|gb|AET82985.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533865|gb|AET82986.1| hypothetical protein, partial [Pinus contorta var. bolanderi]
 gi|357533867|gb|AET82987.1| hypothetical protein, partial [Pinus contorta var. murrayana]
 gi|357533869|gb|AET82988.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533871|gb|AET82989.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533875|gb|AET82991.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533877|gb|AET82992.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533879|gb|AET82993.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533883|gb|AET82995.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533885|gb|AET82996.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533887|gb|AET82997.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533889|gb|AET82998.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533891|gb|AET82999.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533893|gb|AET83000.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533895|gb|AET83001.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533897|gb|AET83002.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533899|gb|AET83003.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533903|gb|AET83005.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533905|gb|AET83006.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533907|gb|AET83007.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533909|gb|AET83008.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533911|gb|AET83009.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533913|gb|AET83010.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533915|gb|AET83011.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533917|gb|AET83012.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533919|gb|AET83013.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533921|gb|AET83014.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533923|gb|AET83015.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533925|gb|AET83016.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533927|gb|AET83017.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533929|gb|AET83018.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533931|gb|AET83019.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533933|gb|AET83020.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533935|gb|AET83021.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533937|gb|AET83022.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533939|gb|AET83023.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533941|gb|AET83024.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533943|gb|AET83025.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533945|gb|AET83026.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533947|gb|AET83027.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533949|gb|AET83028.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533951|gb|AET83029.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533953|gb|AET83030.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533955|gb|AET83031.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533957|gb|AET83032.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533959|gb|AET83033.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533961|gb|AET83034.1| hypothetical protein, partial [Pinus contorta var. murrayana]
          Length = 146

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 7/101 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+  + D     ++  R T +Q++ LE  F+     + +++++L+K L L+ RQ+  WF
Sbjct: 20  GDEDGSDDCIHLGEKKRRLTLEQVRALEKNFEMANKLEPEKKMQLAKALGLQPRQIAVWF 79

Query: 183 QNRRTQMKT-QLE------RHENSLLRQENDKLRAENMSIR 216
           QNRR + KT QLE      +H+   L+Q  D L  EN +++
Sbjct: 80  QNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQ 120


>gi|194853624|ref|XP_001968195.1| GG24636 [Drosophila erecta]
 gi|190660062|gb|EDV57254.1| GG24636 [Drosophila erecta]
          Length = 478

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 341 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 400

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 401 RKQ-KREEQERLRK 413


>gi|161076856|ref|NP_001097140.1| CG34367, isoform C [Drosophila melanogaster]
 gi|157400139|gb|ABV53663.1| CG34367, isoform C [Drosophila melanogaster]
          Length = 420

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +    +HEN + +
Sbjct: 203 QLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMHK 256


>gi|5596514|gb|AAD45590.1|AF144675_1 antennapedia-like homeodomain protein [Lingula anatina]
          Length = 77

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 132 PPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           P RK+  H ++  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR + K 
Sbjct: 1   PDRKRGRHTYSRHQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK 60

Query: 192 Q 192
           +
Sbjct: 61  E 61


>gi|1644431|gb|AAB17576.1| homeodomain protein, partial [Polycelis nigra]
          Length = 107

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 14/87 (16%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           ++ Y RH   Q  ELE  F+   +   ++R+E++  LCL  RQ+K WFQNRR  MK + E
Sbjct: 10  RQTYSRH---QTLELEKEFQFNHYLTRRRRIEIAHNLCLSERQIKIWFQNRR--MKLKKE 64

Query: 195 RHENSLLRQENDKL------RAENMSI 215
           R +   +++ ND+L      + +NMS+
Sbjct: 65  RQQ---IQELNDELSRKVKSKKQNMSV 88


>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 285

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 19/122 (15%)

Query: 131 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           N  RK+R  R   T  Q++ELE +F E  +PD   R EL+ ++ L   +V+ WFQNRR +
Sbjct: 93  NEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 152

Query: 189 MKTQLER-------------HENSLLRQEN--DKLRAENMSIRDAMRNPICT-NCGGPAI 232
            + Q ER              + S  R E+  D   A+  S      NP+ T NCGGP+ 
Sbjct: 153 FRKQ-ERAAAAAAAAAKSSSGKKSDSRDEDSKDAKSADPDSTGGPGPNPVPTSNCGGPSP 211

Query: 233 IG 234
            G
Sbjct: 212 TG 213


>gi|56718239|gb|AAW24455.1| CG13424-related protein 2 [Oikopleura dioica]
          Length = 419

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           P+K+     TP+QI+ LE+ F +  +    +R+ELSK L L   Q+K WFQNRRT+ K
Sbjct: 196 PKKRPRTAFTPEQIKRLEAEFSKNKYLSVAKRMELSKALNLTETQIKIWFQNRRTKWK 253


>gi|1574928|gb|AAB09405.1| HEHBOX6, partial [Heliocidaris erythrogramma]
          Length = 109

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           RK+    +T  Q  ELE  F    +   K+R+E+++ +CL  RQ+K WFQNRR  MK + 
Sbjct: 8   RKRGRQTYTRAQTLELEKEFHYNRYLTRKRRIEIAQAVCLSERQIKIWFQNRR--MKWKK 65

Query: 194 ERHENSLLRQENDKLRAE 211
           ER  + +   E+D    E
Sbjct: 66  ERVRDGIGDDEDDAKEGE 83


>gi|212288009|gb|ABI34245.3| RT01146p [Drosophila melanogaster]
          Length = 424

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 287 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 346

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 347 RKQ-KREEQERLRK 359


>gi|259053113|emb|CAX11343.1| abdominal A [Parasteatoda tepidariorum]
          Length = 250

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 126 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 185

Query: 193 LE--RHENSLLRQENDKLRAEN 212
           +   +  N   R E+ K++ E+
Sbjct: 186 MRAVKEINEQARMESSKVKEED 207


>gi|189066637|dbj|BAG36184.1| unnamed protein product [Homo sapiens]
          Length = 303

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|345649198|gb|AEO14130.1| RHOXF2 protein [Erythrocebus patas]
          Length = 283

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 22/114 (19%)

Query: 106 LLEHESRSGSDNMDG------ASGDDLDAADNPP------------RKKRYHRHTPQQIQ 147
           LL  E+R GS   DG       SG +    D+PP            ++   H  TP Q+Q
Sbjct: 83  LLWKENREGSSGSDGDNEDSDQSGKEPRQQDSPPPGTVGGLEPGNAQEPSVHAFTPLQLQ 142

Query: 148 ELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLL 201
           ELE +F+    P E  R  L++ + +    V+ WF+NRR + +    RH+ +L+
Sbjct: 143 ELERIFQRKKFPSEFLRRRLARSMNMTELSVQIWFENRRAKWR----RHQRALM 192


>gi|195355156|ref|XP_002044059.1| GM21128 [Drosophila sechellia]
 gi|194129312|gb|EDW51355.1| GM21128 [Drosophila sechellia]
          Length = 140

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 36/51 (70%)

Query: 142 TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           TPQQ+QELE+LF++  +PD   R E++ R+ L   +V+ WFQNRR + + Q
Sbjct: 32  TPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQ 82


>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
 gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
 gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
          Length = 292

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           S ++  A G  L   +NP +K R +R   T  Q+ ELE  F++  +PD   R EL+ ++ 
Sbjct: 85  SPDLPDADGGKLSDDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVN 144

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           L   +V+ WFQNRR + + Q +   +S+  QE+  L
Sbjct: 145 LPEVRVQVWFQNRRAKWRRQEKLEVSSIKLQESSML 180


>gi|17985969|ref|NP_536752.1| ultrabithorax, isoform A [Drosophila melanogaster]
 gi|48428932|sp|P83949.1|UBX_DROME RecName: Full=Homeotic protein ultrabithorax
 gi|48428933|sp|P83950.1|UBX_DROSI RecName: Full=Homeotic protein ultrabithorax
 gi|433477|emb|CAA53803.1| homeotic ultrabithorax protein [Drosophila melanogaster]
 gi|829190|emb|CAA29194.1| Ultrabithorax gene product [Drosophila melanogaster]
 gi|4323521|gb|AAD16402.1| Ultrabithorax [Drosophila simulans]
 gi|10726569|gb|AAF55355.2| ultrabithorax, isoform A [Drosophila melanogaster]
          Length = 389

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  R++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K
Sbjct: 292 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 351

Query: 191 TQLE 194
            +++
Sbjct: 352 KEIQ 355


>gi|357486581|ref|XP_003613578.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
 gi|355514913|gb|AES96536.1| Homeobox-leucine zipper protein ATHB-16 [Medicago truncatula]
          Length = 324

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 16/110 (14%)

Query: 124 DDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQ 183
           +D +A  +   KKR  R + +Q+Q LE  F+     +  ++++L+K L L+ RQV  WFQ
Sbjct: 76  EDYEACYHQQGKKR--RLSSEQVQFLEKSFEVENKLEPDRKVQLAKELGLQPRQVAIWFQ 133

Query: 184 NRRTQMKT-QLERHENSL-------------LRQENDKLRAENMSIRDAM 219
           NRR + KT QLE+   +L             L QENDKL+ E  S+++ +
Sbjct: 134 NRRARFKTKQLEKDYGTLKASFDSLKDDYDNLLQENDKLKEEVNSLKNKL 183


>gi|224118416|ref|XP_002317813.1| predicted protein [Populus trichocarpa]
 gi|222858486|gb|EEE96033.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 47/78 (60%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENS 199
           R + +Q++ LES+F+     + +++++L++ L L+ RQV  WFQNRR + KT+    +  
Sbjct: 2   RFSDEQVRSLESMFESETKLEPRKKMQLARELGLQPRQVAIWFQNRRARWKTKQMEQKYK 61

Query: 200 LLRQENDKLRAENMSIRD 217
            L+   D L +   S+++
Sbjct: 62  TLKASYDNLASSYESLKN 79


>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
          Length = 665

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 101 RSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPH 158
           R RE  ++  S S     DG  G  L       RK+R  R   T QQ+ ELE  F+   +
Sbjct: 326 RGREMEIDENSVSSDGGGDGEVGITLK------RKQRRSRTTFTAQQLDELEKAFERTQY 379

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           PD   R EL +R  L   +V+ WF NRR + + Q+  H+     Q      A  +    A
Sbjct: 380 PDVYTREELGQRTRLTEARVQVWFSNRRARWRKQMGGHQQPHQAQHMGGFSALGLPSASA 439

Query: 219 MRNPICT 225
             +P  +
Sbjct: 440 TTSPYVS 446


>gi|281364781|ref|NP_001162934.1| CG34367, isoform B [Drosophila melanogaster]
 gi|124248424|gb|ABM92832.1| IP17602p [Drosophila melanogaster]
 gi|272406982|gb|AAF52920.2| CG34367, isoform B [Drosophila melanogaster]
          Length = 297

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 4/58 (6%)

Query: 145 QIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLR 202
           Q+ ELE LF+E  +PD   R ELS+RL L   +V+ WFQNRR + +    +HEN + +
Sbjct: 80  QLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCR----KHENQMHK 133


>gi|3236450|gb|AAC23684.1| paired-like homeodomain transcription factor Ptx1 [Gallus gallus]
          Length = 302

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 15/131 (11%)

Query: 74  QPNIDNQGGGDLQLQRMGES---FEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAAD 130
           +P   +       LQR  E     E      S  ++ E E      N DGA       AD
Sbjct: 18  RPQPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKERSGEQKNEDGA-------AD 70

Query: 131 NPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           +P +KK+  R     T QQ+QELE+ F+   +PD   R E++    L   +V+ WF+NRR
Sbjct: 71  DPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRR 130

Query: 187 TQMKTQLERHE 197
            + + + ER++
Sbjct: 131 AKWRKR-ERNQ 140


>gi|409083658|gb|EKM84015.1| hypothetical protein AGABI1DRAFT_110616 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 490

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           +KK  HRH+P Q+  L  LF +  HP  + R  L+ RL +ET+ V  WFQN+R   K +
Sbjct: 18  QKKPRHRHSPAQLAALNELFDKNEHPSLELRSALADRLGMETKTVNAWFQNKRASTKKR 76



 Score = 45.4 bits (106), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 34/55 (61%)

Query: 140 RHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLE 194
           R +P QI+EL  L+   PHP  ++R  +++R+ +  + +  WFQN+R+  K + E
Sbjct: 159 RPSPDQIEELRKLYAINPHPSAEERQVIAERIGMRYQSITNWFQNQRSLAKKRRE 213


>gi|405964577|gb|EKC30046.1| Short stature homeobox protein [Crassostrea gigas]
          Length = 274

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 18/125 (14%)

Query: 84  DLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAA-------------- 129
           DL++++  ES E  I     +D  +  S   ++ +D +   D ++A              
Sbjct: 43  DLRIRKRSESPE--IRSSKNDDPQQPSSPPKTETIDCSEDSDNESAVIERHATSGSGEER 100

Query: 130 DNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           D+P  K+R  R   T +Q+ ELE LF E  +PD   R ELS+RL L   +V+ WFQNRR 
Sbjct: 101 DHPKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRA 160

Query: 188 QMKTQ 192
           + + Q
Sbjct: 161 KCRKQ 165


>gi|301615106|ref|XP_002937019.1| PREDICTED: short stature homeobox protein-like [Xenopus (Silurana)
           tropicalis]
          Length = 290

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 116 DNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLET 175
           +  D    +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L  
Sbjct: 97  EKRDDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 156

Query: 176 RQVKFWFQNRRTQMKTQ 192
            +V+ WFQNRR + + Q
Sbjct: 157 ARVQVWFQNRRAKCRKQ 173


>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
 gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
          Length = 292

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
           S ++  A G  L   +NP +K R +R   T  Q+ ELE  F++  +PD   R EL+ ++ 
Sbjct: 85  SPDLPDADGGKLSDDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVN 144

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           L   +V+ WFQNRR + + Q +   +S+  QE+  L
Sbjct: 145 LPEVRVQVWFQNRRAKWRRQEKLEVSSIKLQESSML 180


>gi|969086|gb|AAA84412.1| UBXIB [Drosophila melanogaster]
          Length = 389

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  R++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K
Sbjct: 292 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 351

Query: 191 TQLE 194
            +++
Sbjct: 352 KEIQ 355


>gi|357533873|gb|AET82990.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
 gi|357533881|gb|AET82994.1| hypothetical protein, partial [Pinus contorta subsp. contorta]
          Length = 146

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 7/101 (6%)

Query: 123 GDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWF 182
           GD+  + D     ++  R T +Q++ LE  F+     + +++++L+K L L+ RQ+  WF
Sbjct: 20  GDEDGSDDCIHLGEKKRRLTLEQVRALEENFEMANKLEPEKKMQLAKALGLQPRQIAVWF 79

Query: 183 QNRRTQMKT-QLE------RHENSLLRQENDKLRAENMSIR 216
           QNRR + KT QLE      +H+   L+Q  D L  EN +++
Sbjct: 80  QNRRARWKTKQLEKDFNILKHDYDSLKQNYDNLMEENNNLQ 120


>gi|195470314|ref|XP_002087453.1| GE15985 [Drosophila yakuba]
 gi|194173554|gb|EDW87165.1| GE15985 [Drosophila yakuba]
          Length = 528

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 391 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 450

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 451 RKQ-KREEQERLRK 463


>gi|297710671|ref|XP_002831994.1| PREDICTED: homeobox protein ESX1 [Pongo abelii]
          Length = 412

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 121 ASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           A G        PP +KR  R   T  Q+QELE+ F E  +PD   R  L+ RL L   +V
Sbjct: 124 AEGPQTAEGPQPPERKRRRRTAFTQFQLQELENFFDEAQYPDVVARERLAARLNLTEDRV 183

Query: 179 KFWFQNRRTQMK 190
           + WFQNRR + K
Sbjct: 184 QVWFQNRRAKWK 195


>gi|308220170|gb|ADO22657.1| ANTP class homeobox transcription factor ANTP51 [Mnemiopsis leidyi]
          Length = 192

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 40/68 (58%)

Query: 126 LDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNR 185
           +  AD+   K+     + +Q++ +E  F+  P+    Q  EL+  L L +RQVK WFQNR
Sbjct: 80  MTTADDKKTKRFRSSFSTEQLRTMEDTFRHRPYLSTAQVEELAGNLALSSRQVKIWFQNR 139

Query: 186 RTQMKTQL 193
           RT++K Q+
Sbjct: 140 RTKLKKQV 147


>gi|170085677|ref|XP_001874062.1| homeodomain transcription factor [Laccaria bicolor S238N-H82]
 gi|164651614|gb|EDR15854.1| homeodomain transcription factor [Laccaria bicolor S238N-H82]
          Length = 497

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%)

Query: 131 NPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           N  +KK  HRH+P Q+  L  LF +  HP    R  L++RL +ET+ V  WFQN+R   K
Sbjct: 24  NTSQKKPRHRHSPAQLAALNELFDKNEHPPLDVRTALAERLGMETKTVNAWFQNKRASSK 83

Query: 191 TQ 192
            +
Sbjct: 84  KR 85



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 129 ADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           +D  PR+ R  R T +Q +EL+ L+   PHP  +QR  LS+R+ +  + V  WFQN+R+ 
Sbjct: 157 SDTMPRRMRM-RPTTEQTEELKKLYNINPHPTTEQRQVLSRRIGMRYQSVANWFQNQRSL 215

Query: 189 MKTQLE 194
            K + E
Sbjct: 216 AKKKKE 221


>gi|452977649|gb|EME77415.1| hypothetical protein MYCFIDRAFT_200686 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 550

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 134 RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLC-LETRQVKFWFQNRRTQMKTQ 192
           RK +  R T  Q + L S F   PHPD  QR  L++ +  L  RQV+ WFQNRR ++K  
Sbjct: 166 RKMKRFRLTHNQTRFLLSEFARQPHPDAAQRERLAREIPGLSARQVQVWFQNRRAKLKRL 225

Query: 193 LERHENSLLRQE--------NDKLRAENMSIRDAMRNPICTNCGGPAIIGDIS 237
            +     ++R             L +   +   +M  P+ ++ GG A  GD S
Sbjct: 226 TQDDRERMMRSRALPSGFDTTQALHSPFGAQPPSMGAPMSSSIGGFATYGDSS 278


>gi|328788511|ref|XP_001120111.2| PREDICTED: short stature homeobox protein 2-like [Apis mellifera]
          Length = 376

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 26/152 (17%)

Query: 52  SSTPQPLSKSMFNSPGLSL-ALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHE 110
           S +P P+S+    SP   + +    +I++    DL++ +   S          + L++ E
Sbjct: 122 SPSPPPISRDRSASPENCVESKSHASINDAKSSDLKIAQAQVS----------KSLMQEE 171

Query: 111 SRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELS 168
              GS+  +  +G+          K+R  R   T +Q+ ELE LF E  +PD   R ELS
Sbjct: 172 GGKGSNCRNSGNGNG---------KQRRSRTNFTLEQLAELERLFDETHYPDAFMREELS 222

Query: 169 KRLCLETRQVKFWFQNRRTQMKTQLERHENSL 200
           +RL L   +V+ WFQNRR + +    +HE+ L
Sbjct: 223 QRLGLSEARVQVWFQNRRAKCR----KHESQL 250


>gi|242045018|ref|XP_002460380.1| hypothetical protein SORBIDRAFT_02g027300 [Sorghum bicolor]
 gi|241923757|gb|EER96901.1| hypothetical protein SORBIDRAFT_02g027300 [Sorghum bicolor]
          Length = 273

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 37/184 (20%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R + +Q++ LE  F+     + +++  L++ L L+ RQV  WFQNRR + KT QL
Sbjct: 51  KKR--RLSAEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 108

Query: 194 ERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDE 253
           ER + + LR   D LR ++    DA+R          A++ +I    + L+   A+L DE
Sbjct: 109 ER-DYAALRHSYDALRHDH----DALRR------DKDALLAEI----KELK---AKLGDE 150

Query: 254 LDRVCALAGKFLGRPVSSMGPPPMPNSSLELGVGTINGFGGLSSTVTTTLPADFGTGISN 313
                A        P +S GPPP       +GVG+       S + ++ +  D G  +  
Sbjct: 151 --EAAASFTSVKAEPAASDGPPP-------VGVGS-------SESDSSAVLNDAGPPVPE 194

Query: 314 ALPV 317
           A PV
Sbjct: 195 AQPV 198


>gi|214982|gb|AAA50028.1| homeodomain protein, partial [Danio rerio]
          Length = 135

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++++ L   +V+ WF+NRR + + 
Sbjct: 39  RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR 98

Query: 192 Q 192
           Q
Sbjct: 99  Q 99


>gi|195350153|ref|XP_002041606.1| GM16652 [Drosophila sechellia]
 gi|194123379|gb|EDW45422.1| GM16652 [Drosophila sechellia]
          Length = 419

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 342 RKQ-KREEQERLRK 354


>gi|267844835|ref|NP_001161156.1| pituitary homeobox 1 [Gallus gallus]
 gi|267844837|ref|NP_001161157.1| pituitary homeobox 1 [Gallus gallus]
 gi|267844839|ref|NP_001161158.1| pituitary homeobox 1 [Gallus gallus]
          Length = 302

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 15/131 (11%)

Query: 74  QPNIDNQGGGDLQLQRMGES---FEGIIGRRSREDLLEHESRSGSDNMDGASGDDLDAAD 130
           +P   +       LQR  E     E      S  ++ E E      N DGA       AD
Sbjct: 18  RPQPSHDMASSFHLQRSSEPRDPIENSASESSDTEVPEKERSGEQKNEDGA-------AD 70

Query: 131 NPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
           +P +KK+  R     T QQ+QELE+ F+   +PD   R E++    L   +V+ WF+NRR
Sbjct: 71  DPAKKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSMREEIAVWTNLTEPRVRVWFKNRR 130

Query: 187 TQMKTQLERHE 197
            + + + ER++
Sbjct: 131 AKWRKR-ERNQ 140


>gi|426220831|ref|XP_004004615.1| PREDICTED: homeobox protein Hox-D12 [Ovis aries]
          Length = 259

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 118 MDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           + G  G    AA    RKKR   +T QQI ELE+ F      + ++R ELS RL L  +Q
Sbjct: 176 LRGVGGLPWGAAPGRARKKR-KPYTKQQIAELENEFLLNEFINRQKRKELSNRLNLSDQQ 234

Query: 178 VKFWFQNRRTQMKTQLERHE 197
           VK WFQNRR + K  + R +
Sbjct: 235 VKIWFQNRRMKKKRVVLREQ 254


>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
          Length = 230

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 17/109 (15%)

Query: 131 NPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           N  RK+R  R   T  Q++ELE +F E  +PD   R EL+ ++ L   +V+ WFQNRR +
Sbjct: 56  NEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 115

Query: 189 MKTQLERHENS-------------LLRQENDKLRAENMSIRDAMRNPIC 224
            + Q ER  NS             LL +E+D   A+  +  D+  NP C
Sbjct: 116 FRKQ-ERAANSKGNSSNPPGKKVDLLSEEDDSTEAK-CTDPDSTANPAC 162


>gi|17136854|ref|NP_476949.1| goosecoid, isoform A [Drosophila melanogaster]
 gi|7296181|gb|AAF51473.1| goosecoid, isoform A [Drosophila melanogaster]
 gi|115646581|gb|ABI34211.2| RT01046p [Drosophila melanogaster]
 gi|208879498|gb|ACI31294.1| IP21556p [Drosophila melanogaster]
          Length = 419

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 132 PPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           PP++KR HR   T +Q+++LE+ F +  +PD   R +L+ ++ L+  +V+ WF+NRR + 
Sbjct: 282 PPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKW 341

Query: 190 KTQLERHENSLLRQ 203
           + Q +R E   LR+
Sbjct: 342 RKQ-KREEQERLRK 354


>gi|312246|emb|CAA51066.1| abdominal [Tribolium castaneum]
          Length = 133

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 5   PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 64

Query: 193 L 193
           L
Sbjct: 65  L 65


>gi|197631360|gb|ACH70609.1| NK-like homeobox protein 1a [Capitella teleta]
          Length = 148

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 119 DGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQV 178
           DG S DD DA+  P R +     T +Q+  LE+ F++  +    +RL L+  L L   QV
Sbjct: 3   DGGSPDDHDASGKPRRVRT--AFTYEQLVALENKFRQTRYLSVCERLNLALSLNLTETQV 60

Query: 179 KFWFQNRRTQMKTQ 192
           K WFQNRRT+ K Q
Sbjct: 61  KIWFQNRRTKWKKQ 74


>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
           [Bombus terrestris]
          Length = 502

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 108 EHESRSGSDNMDGASGDDLDAADNPPRKKRYHRH----TPQQIQELESLFKECPHPDEKQ 163
           E E++ G  +   +SG D ++    P K++  R     T  Q+ ELE  F+   +PD   
Sbjct: 161 EDETKLGDRDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYT 220

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMKTQL 193
           R EL++R  L   +++ WF NRR +++ QL
Sbjct: 221 REELAQRTKLTEARIQVWFSNRRARLRKQL 250


>gi|20197728|gb|AAD20137.2| putative DNA binding protein with homeobox domain [Arabidopsis
           thaliana]
 gi|20197922|gb|AAM15313.1| putative DNA binding protein with homeobox domain [Arabidopsis
           thaliana]
          Length = 173

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 17/125 (13%)

Query: 107 LEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKE--CPHPDEKQR 164
            +H S SG        G++ ++ +   +KK+  + T +Q++ LE  F+E    +PD K +
Sbjct: 24  FDHFSESGY-------GEESNSFNGQEKKKK--KMTSEQLKFLERSFQEEIKLNPDRKMK 74

Query: 165 L------ELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLRAENMSIRDA 218
           L      +LSK L L+ RQ+  WFQNR+ + K +   H    LRQE D +  E   +++ 
Sbjct: 75  LNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEE 134

Query: 219 MRNPI 223
           +  P+
Sbjct: 135 VITPV 139


>gi|285002229|ref|NP_001165453.1| homeobox protein MOX-2 [Xenopus laevis]
 gi|1171000|sp|P39021.2|MEOX2_XENLA RecName: Full=Homeobox protein MOX-2
 gi|520366|gb|AAB00146.1| homeobox protein [Xenopus laevis]
          Length = 298

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 97  IIGRRSREDL--LEHESRSG---SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELES 151
           + G   R+ L   E E R+G   SD+ D   G      ++ PRK+R    T +QI+ELE+
Sbjct: 140 VTGDYGRQSLSPAEAEKRTGKRKSDSSDSQEGSYKSDVNSKPRKERT-AFTKEQIRELEA 198

Query: 152 LFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
            F    +    +R E++  L L  RQVK WFQNRR + K
Sbjct: 199 EFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 237


>gi|49659433|dbj|BAD27255.1| SlHDL2 [Silene latifolia]
          Length = 216

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 14/128 (10%)

Query: 97  IIGRRSREDLLEHESRSG--SDNMD--GASG----DDLDAADNPPRKKRYHRHTPQQIQE 148
           + G+RS   L E +S S   +D++D   AS     DD D  DN  +K R    T  Q   
Sbjct: 14  VSGKRS---LCERDSTSAGAADDLDLERASSRGLSDDEDGGDNSRKKLRL---TKDQSAI 67

Query: 149 LESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKL 208
           LE  FKE    + KQ+L L+KRL L  RQV+ WFQNRR + K +    +   L++  ++L
Sbjct: 68  LEDSFKEHNTLNPKQKLALAKRLGLGPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCEQL 127

Query: 209 RAENMSIR 216
             EN  ++
Sbjct: 128 TEENRRLQ 135


>gi|387598536|gb|AFJ91924.1| homeodomain transcription factor 4 [Platynereis dumerilii]
          Length = 273

 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 114 GSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCL 173
           GS   +GA G     ADN   +  Y RH   Q+ ELE  F    +   ++R+E++  LCL
Sbjct: 153 GSQGANGAYG-----ADNKRTRTAYTRH---QVLELEKEFHFNRYLTRRRRIEIAHALCL 204

Query: 174 ETRQVKFWFQNRRTQMKTQ 192
             RQ+K WFQNRR + K +
Sbjct: 205 TKRQIKIWFQNRRMKWKKE 223


>gi|61367304|gb|AAX42979.1| mesenchyme homeobox 2 [synthetic construct]
          Length = 304

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|1708049|sp|P29454.2|GSCA_XENLA RecName: Full=Homeobox protein goosecoid isoform A
          Length = 243

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 6/84 (7%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 205

Query: 192 QL----ERHENSLLRQENDKLRAE 211
           Q     E  EN+    ++ K  AE
Sbjct: 206 QKRSSSEESENAQKWNKSSKNSAE 229


>gi|393218273|gb|EJD03761.1| hypothetical protein FOMMEDRAFT_139915 [Fomitiporia mediterranea
           MF3/22]
          Length = 482

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR+ R  R TP+Q +ELE LFK   HP  ++R  L  R+ +  + V  WFQN R+ MK +
Sbjct: 136 PRRMRI-RPTPKQREELEKLFKLNTHPSREEREALGNRIGMRYQSVTNWFQNMRSVMKKR 194

Query: 193 LERHE 197
           LE  E
Sbjct: 195 LEDQE 199



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 36/63 (57%)

Query: 130 DNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQM 189
           D P  KK   RH+  Q+  L +L++E  HP  ++R  L++ L ++ + V  WF N+R+  
Sbjct: 6   DEPRDKKPRIRHSEIQLTALNNLYEENEHPSLEERAALAENLGMDPKAVNAWFANKRSAT 65

Query: 190 KTQ 192
           K +
Sbjct: 66  KKK 68


>gi|225456662|ref|XP_002271692.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Vitis
           vinifera]
          Length = 317

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 16/117 (13%)

Query: 117 NMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETR 176
           + D    +DLD   + P KKR  R T  Q+Q LE  F+     + +++++L+K L L+ R
Sbjct: 63  DHDENGDEDLDEYFHQPEKKR--RLTADQVQFLERNFEVENKLEPERKVQLAKDLGLQPR 120

Query: 177 QVKFWFQNRRTQMKT-QLERH-------ENSL------LRQENDKLRAENMSIRDAM 219
           QV  WFQNRR + KT QLE+         NSL      L +E D+L+ E + + D +
Sbjct: 121 QVAIWFQNRRARWKTKQLEKDFGALQASYNSLKAEYENLLKEKDELKTEVILLTDKL 177


>gi|259013396|ref|NP_001158405.1| mesenchyme homeobox [Saccoglossus kowalevskii]
 gi|90660015|gb|ABD97282.1| mox [Saccoglossus kowalevskii]
          Length = 281

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 10/92 (10%)

Query: 99  GRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPH 158
           G R+++D     S +GS++ DG   D     +N PRK+R    T +QI+ELE+ F    +
Sbjct: 146 GHRTKDD-----SDNGSEDGDGYKLD----LNNKPRKERT-AFTKEQIRELENEFSHHNY 195

Query: 159 PDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
               +R E++  L L  RQVK WFQNRR + K
Sbjct: 196 LTRLRRYEIAVTLNLTERQVKVWFQNRRMKWK 227


>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
 gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
          Length = 353

 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 10/109 (9%)

Query: 98  IGRRSREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKE 155
           +G  S ED+      S  D+M    G+D + +D P +K R +R   T  Q+ ELE  F++
Sbjct: 115 LGYSSDEDM----KHSHDDSM----GNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEK 166

Query: 156 CPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQE 204
             +PD   R EL+ ++ L   +V+ WFQNRR + + Q +     +  QE
Sbjct: 167 SHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEKMEAQQMKLQE 215


>gi|300793614|ref|NP_001178832.1| homeo box D12 [Rattus norvegicus]
          Length = 268

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    RKKR   +T QQI ELE+ F      + ++R ELS RL L  +QVK WFQNRR 
Sbjct: 195 AAPGRARKKR-KPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRM 253

Query: 188 QMKTQLERHE 197
           + K  ++R +
Sbjct: 254 KKKRVVQREQ 263


>gi|2495329|sp|Q26430.1|ABDA_MANSE RecName: Full=Homeobox protein abdominal-A homolog
          Length = 97

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR++    +T  Q  ELE  F    +   ++R+E++  LCL  RQ+K WFQNRR ++K +
Sbjct: 5   PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 64

Query: 193 LE--RHENSLLRQENDK 207
           L   +  N   R+E ++
Sbjct: 65  LRAVKEINEQARREREE 81


>gi|297680952|ref|XP_002818233.1| PREDICTED: homeobox protein MOX-2 [Pongo abelii]
          Length = 303

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|254582074|ref|XP_002497022.1| ZYRO0D13596p [Zygosaccharomyces rouxii]
 gi|238939914|emb|CAR28089.1| ZYRO0D13596p [Zygosaccharomyces rouxii]
          Length = 449

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 130 DNPPRKKRYHRHTP-QQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQ 188
           DN P  +R  R T  Q++  L++ F+ C  PD+K+R EL++R  +  + V+ WFQNRR  
Sbjct: 164 DNAPLARRKRRRTSTQELNILQAEFELCSAPDKKKRQELAERCNMSEKAVQIWFQNRRQA 223

Query: 189 MKTQ 192
           +K Q
Sbjct: 224 IKKQ 227


>gi|443692141|gb|ELT93814.1| hypothetical protein CAPTEDRAFT_99648, partial [Capitella teleta]
          Length = 107

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 120 GASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQ 177
           GA+ +   + ++P  K++ HR   TP QI ELE  F +  +PD   R EL+ R+ L   +
Sbjct: 32  GATSNCSSSQESPGSKQKRHRTRFTPAQINELEHAFSKTHYPDIFMREELALRIGLTESR 91

Query: 178 VKFWFQNRRTQMK 190
           V+ WFQNRR + K
Sbjct: 92  VQVWFQNRRAKWK 104


>gi|185136009|ref|NP_001117696.1| NK2 homeobox 1b [Oncorhynchus mykiss]
 gi|62241058|dbj|BAD93686.1| transcription factor Nkx2.1b [Oncorhynchus mykiss]
          Length = 344

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR+KR    +  Q+ ELE  FK+  +    +R  L+  + L   QVK WFQN R +MK Q
Sbjct: 157 PRRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLSPTQVKIWFQNHRYKMKRQ 216

Query: 193 LERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGD 235
            +      ++QEN  +  +    R A+  P+    G P+  G 
Sbjct: 217 AKDKATLQIQQENGNVCPQQSPRRVAV--PVLVKDGKPSQNGS 257


>gi|54695572|gb|AAV38158.1| mesenchyme homeo box 2 (growth arrest-specific homeo box)
           [synthetic construct]
 gi|61367296|gb|AAX42978.1| mesenchyme homeobox 2 [synthetic construct]
          Length = 304

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|397465680|ref|XP_003804615.1| PREDICTED: rhox homeobox family member 1-like [Pan paniscus]
          Length = 192

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 5/69 (7%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQ 192
           PR +R  ++TP Q++ELES+F+   +PD   R+EL++ L +   +V+ WF+N+R + +  
Sbjct: 111 PRTRRT-KYTPLQVEELESVFRHTQYPDVPTRMELAENLGVTEDKVRVWFKNKRARCR-- 167

Query: 193 LERHENSLL 201
             RH+  L+
Sbjct: 168 --RHQRELM 174


>gi|49168590|emb|CAG38790.1| MEOX2 [Homo sapiens]
          Length = 303

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|374277734|gb|AEZ03833.1| homeobrain [Terebratalia transversa]
          Length = 323

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 72/167 (43%), Gaps = 27/167 (16%)

Query: 61  SMFNSPGLSLALQQPNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLE--HESRSGS--- 115
           SMF  P + LA  Q      G           +F G +   SRE      HE RS S   
Sbjct: 71  SMFQRPPMGLARAQ---YLNGESPRATSSPSPTFSGPVSPASRESHSPSFHEDRSSSPLS 127

Query: 116 -DNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLC 172
            D MDG            PRK R  R   T  Q+ +LE  F++  +PD   R EL+ RL 
Sbjct: 128 PDLMDGHR----------PRKIRRSRTTFTTFQLHQLERAFEKSQYPDVFSREELAMRLD 177

Query: 173 LETRQVKFWFQNRRTQMKTQLERHENSLLRQENDKLR--AENMSIRD 217
           L   +V+ WFQNRR + +    + E +L R   + L     N++I D
Sbjct: 178 LSEARVQVWFQNRRAKWR----KREKALGRDSPNMLNHGEHNVNIHD 220


>gi|119370804|sp|Q1KKT1.1|HXDBA_FUGRU RecName: Full=Homeobox protein Hox-D11a
 gi|94482848|gb|ABF22463.1| homeobox protein HoxD11a [Takifugu rubripes]
          Length = 265

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 102 SREDLLEHESRSGSDNMDGASGDDLDAADNPPRKKRYHR--HTPQQIQELESLFKECPHP 159
           ++ED  + E   G +    ++  D +   NPP + R  R  ++  QI+ELE  F    + 
Sbjct: 159 TKEDEHKDEVIGGVEEDSSSNCGDNNNQQNPPSRSRKKRCPYSKYQIRELEREFFFNVYI 218

Query: 160 DEKQRLELSKRLCLETRQVKFWFQNRRTQMK 190
           ++++RL+LS+ L L  RQVK WFQNRR + K
Sbjct: 219 NKEKRLQLSRMLNLSDRQVKIWFQNRRMKEK 249


>gi|84105335|ref|NP_005915.2| homeobox protein MOX-2 [Homo sapiens]
 gi|93141286|sp|P50222.2|MEOX2_HUMAN RecName: Full=Homeobox protein MOX-2; AltName: Full=Growth
           arrest-specific homeobox; AltName: Full=Mesenchyme
           homeobox 2
 gi|119614072|gb|EAW93666.1| mesenchyme homeobox 2 [Homo sapiens]
 gi|208966758|dbj|BAG73393.1| mesenchyme homeobox 2 [synthetic construct]
          Length = 304

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 158 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 216

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 217 RYEIAVNLDLTERQVKVWFQNRRMKWK 243


>gi|732791|emb|CAA57949.1| Mox-2 [Homo sapiens]
 gi|16877533|gb|AAH17021.1| Mesenchyme homeobox 2 [Homo sapiens]
 gi|51095045|gb|EAL24289.1| mesenchyme homeo box 2 (growth arrest-specific homeo box) [Homo
           sapiens]
          Length = 303

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 108 EHESRSG----SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQ 163
           E E RSG    SD+ D   G+     ++ PRK+R    T +QI+ELE+ F    +    +
Sbjct: 157 EAEKRSGGKRKSDSSDSQEGNYKSEVNSKPRKERT-AFTKEQIRELEAEFAHHNYLTRLR 215

Query: 164 RLELSKRLCLETRQVKFWFQNRRTQMK 190
           R E++  L L  RQVK WFQNRR + K
Sbjct: 216 RYEIAVNLDLTERQVKVWFQNRRMKWK 242


>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
           scrofa]
          Length = 300

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%)

Query: 115 SDNMDGASGDDLDAADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLE 174
            D  +    +D D      +++     T +Q+ ELE LF E  +PD   R ELS+RL L 
Sbjct: 98  KDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157

Query: 175 TRQVKFWFQNRRTQMKTQ 192
             +V+ WFQNRR + + Q
Sbjct: 158 EARVQVWFQNRRAKCRKQ 175


>gi|121583908|ref|NP_032300.2| homeobox protein Hox-D12 [Mus musculus]
 gi|259016253|sp|P23812.2|HXD12_MOUSE RecName: Full=Homeobox protein Hox-D12; AltName: Full=Homeobox
           protein Hox-4.7; AltName: Full=Homeobox protein Hox-5.6
 gi|26327111|dbj|BAC27299.1| unnamed protein product [Mus musculus]
 gi|148695222|gb|EDL27169.1| homeobox D12, isoform CRA_b [Mus musculus]
 gi|148877497|gb|AAI45657.1| Homeo box D12 [Mus musculus]
          Length = 268

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 128 AADNPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRT 187
           AA    RKKR   +T QQI ELE+ F      + ++R ELS RL L  +QVK WFQNRR 
Sbjct: 195 AAPGRARKKR-KPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRM 253

Query: 188 QMKTQLERHE 197
           + K  ++R +
Sbjct: 254 KKKRVVQREQ 263


>gi|449520431|ref|XP_004167237.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis
           sativus]
          Length = 285

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T  Q+Q LE  F+E    + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 67  PEKKR--RLTHDQVQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTK 124

Query: 192 QLERHEN------SLLRQENDKLRAENMSIRDAMRNPICTNC------GGPAIIGDIS 237
           QLER  +       LL    D +  EN  ++  + + +   C      GG A I  I+
Sbjct: 125 QLERDYDVLKASYDLLVSNYDSIVKENAVLKSEVAS-LTEKCLAKELGGGEATIPSIT 181


>gi|115476936|ref|NP_001062064.1| Os08g0481400 [Oryza sativa Japonica Group]
 gi|75133144|sp|Q6Z248.1|HOX20_ORYSJ RecName: Full=Homeobox-leucine zipper protein HOX20; AltName:
           Full=HD-ZIP protein HOX20; AltName: Full=Homeodomain
           transcription factor HOX20; AltName: Full=OsHox20
 gi|187609445|sp|A2YWC0.1|HOX20_ORYSI RecName: Full=Homeobox-leucine zipper protein HOX20; AltName:
           Full=HD-ZIP protein HOX20; AltName: Full=Homeodomain
           transcription factor HOX20; AltName: Full=OsHox20
 gi|42409030|dbj|BAD10283.1| putative homeodomain leucine zipper protein [Oryza sativa Japonica
           Group]
 gi|113624033|dbj|BAF23978.1| Os08g0481400 [Oryza sativa Japonica Group]
 gi|125561933|gb|EAZ07381.1| hypothetical protein OsI_29633 [Oryza sativa Indica Group]
 gi|215687008|dbj|BAG90822.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741349|dbj|BAG97844.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 269

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 4/83 (4%)

Query: 135 KKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT-QL 193
           KKR  R + +Q++ LE  F+     + +++  L++ L L+ RQV  WFQNRR + KT QL
Sbjct: 43  KKR--RLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQL 100

Query: 194 ERHENSLLRQENDKLRAENMSIR 216
           ER + + LRQ  D LRA++ ++R
Sbjct: 101 ER-DYAALRQSYDALRADHDALR 122


>gi|449446648|ref|XP_004141083.1| PREDICTED: homeobox-leucine zipper protein HAT5-like [Cucumis
           sativus]
          Length = 285

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 16/118 (13%)

Query: 133 PRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT- 191
           P KKR  R T  Q+Q LE  F+E    + +++ +L+K+L L+ RQV  WFQNRR + KT 
Sbjct: 67  PEKKR--RLTHDQVQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTK 124

Query: 192 QLERHEN------SLLRQENDKLRAENMSIRDAMRNPICTNC------GGPAIIGDIS 237
           QLER  +       LL    D +  EN  ++  + + +   C      GG A I  I+
Sbjct: 125 QLERDYDVLKASYDLLVSNYDSIVKENAVLKSEVAS-LTEKCLAKELGGGEATIPSIT 181


>gi|30685207|ref|NP_568309.2| homeobox-leucine zipper protein HAT7 [Arabidopsis thaliana]
 gi|90101578|sp|Q00466.4|HAT7_ARATH RecName: Full=Homeobox-leucine zipper protein HAT7; AltName:
           Full=HD-ZIP protein ATHB-3; AltName: Full=Homeodomain
           transcription factor ATHB-3; AltName:
           Full=Homeodomain-leucine zipper protein HAT7;
           Short=HD-ZIP protein 7
 gi|110738603|dbj|BAF01227.1| homeobox protein [Arabidopsis thaliana]
 gi|199589350|gb|ACH90466.1| At5g15150 [Arabidopsis thaliana]
 gi|332004739|gb|AED92122.1| homeobox-leucine zipper protein HAT7 [Arabidopsis thaliana]
          Length = 314

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 28/189 (14%)

Query: 75  PNIDNQGGGDLQLQRMGESFEGIIGRRSREDLLEHESRSGSDNMDGAS--GDDLDAADNP 132
           P++   GGG+  + R   SF G+    S    L  +S + ++NM+     G++ + +D+ 
Sbjct: 53  PHLFYGGGGNYMMNR-SMSFTGV----SDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDG 107

Query: 133 P------RKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRR 186
                  +KKR      +Q++ LE  F+     + +++++L+K L L+ RQ+  WFQNRR
Sbjct: 108 SHMMLGEKKKRL---NLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRR 164

Query: 187 TQMKT-QLERHENSLLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRI 245
            + KT QLER  +SL +Q  D L+++N S+                +  ++   ++H R 
Sbjct: 165 ARWKTKQLERDYDSLKKQF-DVLKSDNDSLL----------AHNKKLHAELVALKKHDRK 213

Query: 246 ENARLKDEL 254
           E+A++K E 
Sbjct: 214 ESAKIKREF 222


>gi|148231239|ref|NP_001081278.1| homeobox protein goosecoid isoform B [Xenopus laevis]
 gi|166157903|ref|NP_001107361.1| uncharacterized protein LOC100135186 [Xenopus (Silurana)
           tropicalis]
 gi|1708050|sp|P53546.1|GSCB_XENLA RecName: Full=Homeobox protein goosecoid isoform B
 gi|214186|gb|AAA49729.1| homeobox protein [Xenopus laevis]
 gi|51261943|gb|AAH79970.1| LOC397748 protein [Xenopus laevis]
 gi|113197730|gb|AAI21521.1| LOC100135186 protein [Xenopus (Silurana) tropicalis]
 gi|163916027|gb|AAI57209.1| LOC100135186 protein [Xenopus (Silurana) tropicalis]
          Length = 243

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 205

Query: 192 Q 192
           Q
Sbjct: 206 Q 206


>gi|62859751|ref|NP_001016704.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
 gi|68448558|gb|AAY96798.1| goosecoid [Xenopus (Silurana) tropicalis]
 gi|213624234|gb|AAI70819.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
 gi|213627157|gb|AAI70823.1| goosecoid homeobox [Xenopus (Silurana) tropicalis]
          Length = 243

 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 134 RKKRYHR--HTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKT 191
           R+KR HR   T +Q++ LE+LF+E  +PD   R +L++R+ L   +V+ WF+NRR + + 
Sbjct: 146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRR 205

Query: 192 Q 192
           Q
Sbjct: 206 Q 206


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.133    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,755,289,628
Number of Sequences: 23463169
Number of extensions: 431832968
Number of successful extensions: 1630403
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12916
Number of HSP's successfully gapped in prelim test: 2318
Number of HSP's that attempted gapping in prelim test: 1608519
Number of HSP's gapped (non-prelim): 21269
length of query: 590
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 442
effective length of database: 8,886,646,355
effective search space: 3927897688910
effective search space used: 3927897688910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)