BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007771
         (590 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A4D0V7|CPED1_HUMAN Cadherin-like and PC-esterase domain-containing protein 1 OS=Homo
           sapiens GN=CPED1 PE=2 SV=1
          Length = 1026

 Score = 39.3 bits (90), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query: 287 WQPNGCDIPSLNATDFLERLRGKKLVFVGDSLNRNMWESLVCILRNSIRNKKRVY 341
           WQP+ C    L      + L G+K++F+GDS NR +   L+  L  +++  ++V+
Sbjct: 747 WQPHNCQYGVLTKPQLQQCLGGRKILFIGDSTNRGIMYYLIERLNETLQEWQKVH 801


>sp|A8X354|NNRD_CAEBR ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Caenorhabditis
           briggsae GN=CBG06820 PE=3 SV=1
          Length = 307

 Score = 37.7 bits (86), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 256 PYYPPGSCPYIDRDFDCHLNGRPDDGFVKWKWQPNGCDIPSLNATDFLERLRGKKLVFVG 315
           PYY   S   +  D   H+   PD   V   + P+    P +NA+  L +L     + VG
Sbjct: 36  PYYAASSVSRLGADL-IHVFCAPDAAPVIKGYSPDLIVHPGMNASSILPKLNRMDAIVVG 94

Query: 316 DSLNRN--MWESLVCILRNSIRNKKRVYEISG 345
             L RN  +W  L  I  N ++N+K  + I G
Sbjct: 95  PGLGRNPTLWPLLQEIF-NFVKNEKVPFVIDG 125


>sp|Q1LW89|CASD1_DANRE CAS1 domain-containing protein 1 OS=Danio rerio GN=casd1 PE=2 SV=2
          Length = 781

 Score = 36.6 bits (83), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 39/178 (21%)

Query: 287 WQPNGCDIPSLNATDFLERLRGKKLVFVGDSLNRNMWESLVCILRNSIRNKKRVYEISGR 346
           WQP GC +    +T+    LR K++ FVGDS  R ++ S + ++   ++      E+  +
Sbjct: 64  WQPYGCMLHKYKSTEAKFCLREKRIAFVGDSRIRQLFYSFIKMMNPEVK------EVGNK 117

Query: 347 REFKKKGFYAFIFEDYNCTVDFVSSPFLVRESSFTGRNGTFETLRLDLMDRTTSMYQDAD 406
            E          F D + TV+F+          +   N    +L+  LM  T        
Sbjct: 118 HE-------NIPFVDGDSTVNFL---------WYAEVNN---SLKEQLMLWTEGSASKPH 158

Query: 407 VIIFNTGHWWTHEKTSRGEDYYQEGNFVHPRLKVLEAYKRALTTWARWVDKNVDHNRT 464
           VII     W       + E  +Q              YK  LT  A  ++K  +H+  
Sbjct: 159 VIIIGAATWSIKLHNGKSEALFQ--------------YKANLTAIADTLEKLAEHSEV 202


>sp|Q6W4X9|MUC6_HUMAN Mucin-6 OS=Homo sapiens GN=MUC6 PE=1 SV=3
          Length = 2439

 Score = 35.4 bits (80), Expect = 1.4,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 59/168 (35%), Gaps = 30/168 (17%)

Query: 129 EANASAVSRNGNFSDSSADKVNFSHTVNNGSFPVEEGRSCGNCSL-VVKGDVNSKEIGSQ 187
           +A+ +A  + G  + S A    +S   +    PV   RS G CS+     +   +E GS 
Sbjct: 255 QADVAAAPQPGPQNSSCATLSEYSRQCSMVGQPVRRWRSPGLCSVGQCPANQVYQECGSA 314

Query: 188 FVNNTSYVNSKVPDNNNVTNFSGDGGSLNDSNNKITNPRYDSEPTKMHGSSY-------- 239
            V   S        +     F  +G  LND +N  T       P  +HG+ Y        
Sbjct: 315 CVKTCSNPQHSCSSSCTFGCFCPEGTVLNDLSNNHTCVPVTQCPCVLHGAMYAPGEVTIA 374

Query: 240 --DKCNIFDGRWVRD-------------------DSKPYYPPGSCPYI 266
               C    GRWV                     D++PY   G+C YI
Sbjct: 375 ACQTCRCTLGRWVCTERPCPGHCSLEGGSFVTTFDARPYRFHGTCTYI 422


>sp|Q4UJN3|Y480_RICFE Uncharacterized protein RF_0480 OS=Rickettsia felis (strain ATCC
           VR-1525 / URRWXCal2) GN=RF_0480 PE=4 SV=1
          Length = 294

 Score = 32.7 bits (73), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 12/87 (13%)

Query: 303 LERLRGKKLVFVGDSLNRNMWESLVCILRNSIRNKKRVY-------EISGRREFKKKGFY 355
           L+    K LV +G+ ++++++ +L  +LRN  +N K +Y         S ++E ++  F 
Sbjct: 53  LDEFLFKSLVPIGEQIDKDIYLTLTPLLRNINKNSKAIYIDQLILTNDSYKKELQESDFP 112

Query: 356 AFIFEDYNCTVDFVSSPFLVRESSFTG 382
            F+ E  N  +     P +     FTG
Sbjct: 113 NFVNEMSNSKI-----PIIAVNDGFTG 134


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.134    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,584,956
Number of Sequences: 539616
Number of extensions: 10757438
Number of successful extensions: 44166
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 35274
Number of HSP's gapped (non-prelim): 5749
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)