BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007775
(590 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1
SV=3
Length = 843
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 214/531 (40%), Gaps = 86/531 (16%)
Query: 132 FVPRNNIEEAILLLMI----LLRKVALKRIEWDPS-----------ILDHLSFAFSIAGD 176
F P+ N EEA+LLL+I R L RI S + D L+ A G
Sbjct: 319 FCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQ 378
Query: 177 LSSLATQIEELLPGIINRKERYHILALCYYGAGEDLVALNLLRTLLSGSEDPKCLPALLI 236
L+ +E + ++ AL AG+ A+ +L+ + D +P L+
Sbjct: 379 YEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIP--LL 436
Query: 237 ASKICGEYPDLAEEGATFASRALECLGDGCDQMESTANCLLGISLSAQSKVAITDFDRAT 296
A+K+C EE FA ++ +G+ + ++ LG++ S Q+ A +
Sbjct: 437 AAKLCMGSLHWLEEAEKFAKTVVD-VGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEV 495
Query: 297 RQAKALQALVSAARSTNMRDLSILYRLSLEYAEQRKLNAAHYYAKMLLKLEGGSNLKGWL 356
Q KAL A A S + D + L+L+ A R++ A Y + L+L+G +
Sbjct: 496 LQRKALLAF-QRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQG-DDANSLH 553
Query: 357 LMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQGQLKGAVETYTHLLA 416
L+A +LSAQK Y DA I++ AL + E LL +K K+Q + A+ T H+L
Sbjct: 554 LLALLLSAQKHYHDALNIIDMALSEYP--ENFILLFSKVKLQSLCRGPDEALLTCKHMLQ 611
Query: 417 AL---------------------------QVQTKTFSSDKRFYKGSANHARSL------- 442
Q+ T T GS HA S+
Sbjct: 612 IWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSV-HATSVAASRVEQ 670
Query: 443 -----------------ELEVWLDLAFI-------YINLSQWHDAEICLSKSEAISSYSA 478
L W+ LA I YI + + +A C ++ + S
Sbjct: 671 ALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSH 730
Query: 479 SKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLM 538
+ + G + E +G EA + + AL I P HV S+ A++L +L S A L
Sbjct: 731 NVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLA--EKILR 788
Query: 539 AALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEETAPVEPF 589
A++++ W LG ++QG ++ A ECF A LE ++P PF
Sbjct: 789 DAVQVNSTAHEVWNGLGEVLQAQGNDAA---ATECFLTALELEASSPAVPF 836
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 218/531 (41%), Gaps = 88/531 (16%)
Query: 132 FVPRNNIEEAILLLMI----LLRKVALKRI---EWD--------PSILDHLSFAFSIAGD 176
+ P++NIEEA+LLL+I R V L R+ E D +I D LS G
Sbjct: 336 YCPKDNIEEALLLLLISESMATRDVVLSRVPEQEEDRTVSLQNAAAIYDLLSITLGRRGQ 395
Query: 177 LSSLATQIEELLPGIINRKERYHILALCYYGAGEDLVALNLLRTLLSGSEDPKCLPALLI 236
L+ +E + ++ +AL G+ A++LLR + +P L+
Sbjct: 396 YVMLSECLERAMKFAFGEFHLWYQVALSMVACGKSAYAVSLLRECVKLRPSDPTVP--LM 453
Query: 237 ASKICGEYPDLAEEGATFASRALECLGDGCDQMESTANCLLGISLSAQSKVAITDFDRAT 296
A+K+C EE FA + LG+ + LG++ S Q+ A +
Sbjct: 454 AAKVCIGSLRWLEEAEHFAMMVI-SLGEEAGEFLPKGYLALGLTYSLQATDATLKSKQDE 512
Query: 297 RQAKALQALVSAARSTNMRDLSILYRLSLEYAEQRKLNAAHYYAKMLLKLEGGSNLKGWL 356
KALQ L A + ILY +SL+ A R++++A + LK+ +
Sbjct: 513 LHRKALQTLERAQQLAPSDPQVILY-VSLQLALVRQISSAMEQLQEALKVR-KDDAHALH 570
Query: 357 LMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQGQLKGAVETYTHLLA 416
L+A + SAQK ++ A ++N A+ T E L+ TK K++ V LKG E
Sbjct: 571 LLALLFSAQKHHQHALDVVNMAI--TEHPENFNLMFTKVKLEQV---LKGPEEALVTCRQ 625
Query: 417 ALQVQTKTFS--------SDKRFYKG------SANH--------------------ARSL 442
L++ +S D F +G S H A L
Sbjct: 626 VLRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQSGMHLTLPDAHDADSGSRRASSIAASRL 685
Query: 443 E-----------------LEVWLDLAFIYIN-----LSQWH--DAEICLSKSEAISSYSA 478
E +++W L I++ + Q H +A C+ ++ + S
Sbjct: 686 EEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCIQEAAGLFPTSH 745
Query: 479 SKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLM 538
S + G L E KG +EA + ++ AL ++P V + S ++L +L +S A + L
Sbjct: 746 SVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLA--QKVLR 803
Query: 539 AALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEETAPVEPF 589
A+ AW LG ++QG + A +CF A LE ++PV PF
Sbjct: 804 DAVERQSTCHEAWQGLGEVLQAQGQNEA---AVDCFLTALELEASSPVLPF 851
>sp|Q8BGB2|TTC7A_MOUSE Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1
SV=1
Length = 858
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 215/527 (40%), Gaps = 81/527 (15%)
Query: 132 FVPRNNIEEAILLLMI----LLRKVALKR-----------IEWDPSILDHLSFAFSIAGD 176
+ P++NIEEA+LLL+I R V L R ++ +I D LS G
Sbjct: 337 YCPKDNIEEALLLLLISESMATRDVVLSRAPEQAEDRKVSLQNASAIYDLLSITLGRRGQ 396
Query: 177 LSSLATQIEELLPGIINRKERYHILALCYYGAGEDLVALNLLRTLLSGSEDPKCLPALLI 236
L+ +E + ++ +AL G+ A++LLR + +P L+
Sbjct: 397 YVMLSECLERAMKCAFGEFHLWYQVALSMVACGKSAYAVSLLRECMKLQPSDPTVP--LM 454
Query: 237 ASKICGEYPDLAEEGATFASRALECLGDGCDQMESTANCLLGISLSAQSKVAITDFDRAT 296
A+K+C EE FA+ + LG+ + LG++ S Q+ A +
Sbjct: 455 AAKVCIGSLHWLEEAEHFATVVI-GLGEEAGESLPKGYLALGLTYSLQATDATLKSKQDE 513
Query: 297 RQAKALQALVSAARSTNMRDLSILYRLSLEYAEQRKLNAAHYYAKMLLKLEGGSNLKGWL 356
KALQ L AR D I++ ++L+ A R++++A + L + +
Sbjct: 514 LHRKALQTL-ERARELAPDDPQIIFYVALQLALVRQISSAMERLQEALTM-CRDDANALH 571
Query: 357 LMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQGQLKGAVETYTHLLA 416
L+A + SAQK Y+ A ++N A+ T E L+ TK K++ V + A+ T +L
Sbjct: 572 LLALLFSAQKYYQHALDVINMAI--TEHPENFNLMFTKVKLEQVLKGPEEALVTCRQMLR 629
Query: 417 ALQV-----QTKTFSSDKRF-------------------------YKGSANHARSLE--- 443
Q Q D F + S+ A LE
Sbjct: 630 LWQTLYNFSQLGGLEKDGSFEGLTVKKQNGIHLTLPDAHDADSGSRRASSIAASRLEEAM 689
Query: 444 --------------LEVWLDLAFIYINLS-------QWHDAEICLSKSEAISSYSASKCH 482
+++W L I++ + Q +A C+ ++ + S S +
Sbjct: 690 SELTLTTSVLKQGPMQLWTTLEQIWLQAAELFMEQRQLKEAGFCIQEAAGLFPTSHSVLY 749
Query: 483 ATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALR 542
G L E KG ++EA + ++ AL ++P V + S ++L +L +S A + L A+
Sbjct: 750 MRGRLAEVKGSFEEAKQLYKEALTVNPDGVRIMHSLGLMLSQLGHKSLA--QKVLRDAVE 807
Query: 543 LDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEETAPVEPF 589
AW LG + QG + A +CF A LE ++PV PF
Sbjct: 808 RQSTFHEAWQGLGEVLQDQGQNEA---AVDCFLTALELEASSPVLPF 851
>sp|Q8RVB2|SPY_SOLLC Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Solanum
lycopersicum GN=SPY PE=2 SV=1
Length = 931
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 468 SKSEAISSYSASKCHAT--GVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLR-- 523
S SEAI + C T G+LY+ +G EA +++ AL DP++ P+ A+VL
Sbjct: 104 SFSEAIKVDPQNACALTHCGILYKDEGRLVEAAESYEKALKADPSYTPAAECLAIVLTDI 163
Query: 524 ----KLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAA 578
KL+ + I+ + A+++D + A+YNLG+ Y S+ Q A C+E AA
Sbjct: 164 GTSLKLAGNTQEGIQKYY-EAIKIDSHYAPAYYNLGVVY-SEMMQYDM--ALNCYEKAA 218
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 473 ISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAV 532
+ + A C+ GV+Y+ + +A++ ++ AL+I P SL + VV A
Sbjct: 329 FNPHCAEACNNLGVIYKDRDNLDKAVECYQLALSIKPNFSQSLNNLGVVYTVQGKMDAAA 388
Query: 533 IRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAE 572
S + A+ + + A+ NLG+ Y+ G S +EA E
Sbjct: 389 --SMIEKAIIANPTYAEAYNNLGVLYRDAGNISLAIEAYE 426
>sp|Q20144|TMTC1_CAEEL Transmembrane and TPR repeat-containing protein F38B6.6
OS=Caenorhabditis elegans GN=F38B6.6 PE=3 SV=2
Length = 690
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 447 WLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALN 506
W++L +NL ++++AE L S I SA GVLY++ + A+ A+++A
Sbjct: 503 WMNLGISQMNLKKYYEAEKSLKNSLLIRPNSAHCLFNLGVLYQRTNRDEMAMSAWKNATR 562
Query: 507 IDPAHVPSLISTAVVLRKLSDQSNAVIRSF 536
IDP+H S + VVL LS S + S+
Sbjct: 563 IDPSHSQSWTNLFVVLDHLSQCSQVIDLSY 592
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 485 GVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLD 544
G + GL K+A K + +A+ +DP++ +L + +L K D A S L A+ L
Sbjct: 439 GKVLGDNGLTKDAEKNYWNAIKLDPSYEQALNNLGNLLEKSGDSKTA--ESLLARAVTLR 496
Query: 545 GMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEETAPVEP 588
+ AW NLG+ S++ + +EA SL+ + + P
Sbjct: 497 PSFAVAWMNLGI---------SQMNLKKYYEAEKSLKNSLLIRP 531
>sp|O82039|SPY_PETHY Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Petunia
hybrida GN=SPY PE=2 SV=1
Length = 932
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 468 SKSEAISSYSASKCHAT--GVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLR-- 523
S +EAI + C T G+LY+ +G EA ++++ AL DP++ P+ A+VL
Sbjct: 104 SFAEAIKLDPQNACALTHCGILYKDEGRLVEAAESYQKALKADPSYKPAAECLAIVLTDI 163
Query: 524 ----KLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAA 578
KL+ S I+ + A+++D + A+YNLG+ Y S+ Q A C+E AA
Sbjct: 164 GTSLKLAGNSQEGIQKYY-EAIKIDSHYAPAYYNLGVVY-SEMMQYDM--ALNCYEKAA 218
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 473 ISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAV 532
+ + A C+ GV+Y+ + +A++ ++ AL I P SL + VV A
Sbjct: 329 FNPHCAEACNNLGVIYKDRDNLDKAVECYQMALTIKPNFSQSLNNLGVVYTVQGKMDAAA 388
Query: 533 IRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAE 572
S + A+ + + A+ NLG+ Y+ G S +EA E
Sbjct: 389 --SMIEKAIIANPTYAEAYNNLGVLYRDAGNISLAIEAYE 426
>sp|Q57711|Y941_METJA TPR repeat-containing protein MJ0941 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0941 PE=4 SV=3
Length = 338
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 33/183 (18%)
Query: 355 WLLMARILSAQKRYEDAETILNAAL-----DQTGKWEQGELLRTKAKVQLVQGQLKGAVE 409
W+ A IL RYEDA LN AL D+ + +G LL+ G+ + A+E
Sbjct: 168 WVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKR-------MGKFREALE 220
Query: 410 TYTHLLAALQVQTKTFSSDKRFYKGSANHARSLELEVWLDLAFIYINLSQWHDAEICLSK 469
+ L+ L V+ + + HA SL L L DAE ++
Sbjct: 221 CFKKLIDELNVK----------WIDAIRHAVSLMLA-----------LDDLKDAERYINI 259
Query: 470 SEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQS 529
I + + G LYE+ G EA+K + + + P ++ +L+S A + + +
Sbjct: 260 GLEIRKDDVALWYFKGELYERLGKLDEALKCYEKVIELQPHYIKALLSKARIYERQGNIE 319
Query: 530 NAV 532
A+
Sbjct: 320 AAI 322
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 446 VWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSAL 505
+W+ A I L ++ DA +CL+++ + + + + GVL ++ G ++EA++ F+ +
Sbjct: 167 MWVKKAEILRKLGRYEDALLCLNRALELKPHDKNALYLKGVLLKRMGKFREALECFKKLI 226
Query: 506 N-IDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQ 564
+ ++ + ++ ++ L D +A ++ L + + + WY G Y+ G
Sbjct: 227 DELNVKWIDAIRHAVSLMLALDDLKDA--ERYINIGLEIRKDDVALWYFKGELYERLGKL 284
Query: 565 SSKLEAAECFEAAASLE 581
EA +C+E L+
Sbjct: 285 D---EALKCYEKVIELQ 298
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 27/175 (15%)
Query: 401 QGQLKGAVETYTHLLAALQVQTKTFSSDKRFYKGSANHARSLELEVWLDLAFIYINLSQW 460
+G++K A+ T+ LL+ T+ + Y S N +L+
Sbjct: 76 KGEIKEAITTFEELLSYESKNPITWVFVGQLYGMSGNCDEALK----------------- 118
Query: 461 HDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAV 520
C +K+ I + S + E G Y E +K + L P VP + A
Sbjct: 119 -----CYNKALGIENRFLSAFLLKTICLEFLGEYDELLKCYNEVLTYTPNFVPMWVKKAE 173
Query: 521 VLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFE 575
+LRKL +A++ L AL L + +A Y G+ K G EA ECF+
Sbjct: 174 ILRKLGRYEDALL--CLNRALELKPHDKNALYLKGVLLKRMGKFR---EALECFK 223
>sp|Q6YZI0|SPY_ORYSJ Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa
subsp. japonica GN=SPY PE=3 SV=1
Length = 927
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 466 CLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLR-- 523
C +++ I +A G++Y+ +G EA +A++ A N DP++ P+ A+VL
Sbjct: 90 CFNEAVRIDPGNACALTYCGMIYKDEGHLVEAAEAYQKARNADPSYKPAAEFLAIVLTDL 149
Query: 524 ----KLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAA 578
KL+ + I+ + AL +D + A+YNLG+ Y S+ Q A C+E AA
Sbjct: 150 GTSLKLAGNTEEGIQKYC-EALEVDSHYAPAYYNLGVVY-SEMMQFDL--ALTCYEKAA 204
>sp|Q7K4B6|TMTC3_DROME Transmembrane and TPR repeat-containing protein CG4050
OS=Drosophila melanogaster GN=CG4050 PE=2 SV=1
Length = 926
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 440 RSLELEVWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIK 499
RS ++ +++ I + L++ A+ ++ + +A + GV++ ++G ++A
Sbjct: 627 RSDYVQAYINRGDILMKLNRTAQAQEVYEQALLYDNENADIYYNLGVVFLEQGKSQQAQV 686
Query: 500 AFRSALNIDPAHVPSLISTAVVLRKL-SDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFY 558
F A+ + P H +L+++A++L++L +++ V RS L L D N ++NLG+
Sbjct: 687 YFNKAIELYPEHEQALLNSAILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLA 746
Query: 559 KSQGTQSSKLEAAECFEAAASLE 581
+SS EA + F+ A L+
Sbjct: 747 MD---ESSFDEAEQFFKRAIHLK 766
>sp|Q96301|SPY_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis
thaliana GN=SPY PE=1 SV=1
Length = 914
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 466 CLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLR-- 523
C S++ + ++A G+L++++G EA ++++ AL D ++ P+ A+VL
Sbjct: 99 CFSEAIRLDPHNACALTHCGILHKEEGRLVEAAESYQKALMADASYKPAAECLAIVLTDL 158
Query: 524 ----KLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAA 578
KL+ + I+ + AL++D + A+YNLG+ Y + L C+E AA
Sbjct: 159 GTSLKLAGNTQEGIQKYY-EALKIDPHYAPAYYNLGVVYSEMMQYDNAL---SCYEKAA 213
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 492 GLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAW 551
G +E I+ + AL IDP + P+ + VV ++ NA + + AAL M + A+
Sbjct: 166 GNTQEGIQKYYEALKIDPHYAPAYYNLGVVYSEMMQYDNA-LSCYEKAALERP-MYAEAY 223
Query: 552 YNLGLFYKSQGTQSSKLEAA-ECFE 575
N+G+ YK++G LE A C+E
Sbjct: 224 CNMGVIYKNRG----DLEMAITCYE 244
>sp|Q86TZ1|TTC6_HUMAN Tetratricopeptide repeat protein 6 OS=Homo sapiens GN=TTC6 PE=2
SV=1
Length = 520
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 441 SLELEVWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKA 500
+++L +L+ IY+ L Q+ A ++ IS + S CHAT + + + ++EA+
Sbjct: 173 TVKLNTFLNRGLIYVELGQYGFALEDFKQAALISRTNGSLCHATAMCHHRINEFEEAVNF 232
Query: 501 FRSALNIDPAHVPSLI 516
F AL I+P + + +
Sbjct: 233 FTWALKINPCFLDAYV 248
>sp|Q8LP10|SPY_EUSER Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Eustoma
exaltatum subsp. russellianum GN=SPY PE=2 SV=1
Length = 918
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 466 CLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKL 525
C S++ + ++A G+LY+ +G EA +++ AL DP++ P+ A VL L
Sbjct: 88 CFSEAIRLDPHNACALTHCGILYKDEGRLVEA-ASYQKALQADPSYKPAAECLATVLNDL 146
Query: 526 SDQSNAVIRSFLMA---ALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEE 582
+ + A+++D + A YNLG+ Y S+ Q A C+E AA+
Sbjct: 147 GTSLKGNTQEGIQKYYEAVKIDPHYAPACYNLGVVY-SEMMQYDV--ALSCYERAATESP 203
Query: 583 T 583
T
Sbjct: 204 T 204
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 473 ISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAV 532
+ + A C+ GV+Y+ + +A++ ++ AL+I P SL + VV A
Sbjct: 301 FNPHCAEACNNLGVIYKDRDNLDKAVECYQKALSIKPNFSQSLNNLGVVFTVQGKMDAAA 360
Query: 533 IRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAE 572
S + A+ + + A+ NLG+ Y+ G +EA E
Sbjct: 361 --SMIEKAIVANPTYAEAYNNLGVLYRDAGNIFLAIEAYE 398
>sp|O82422|SPY_HORVU Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Hordeum
vulgare GN=SPY PE=2 SV=1
Length = 944
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 466 CLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLR-- 523
C +++ + +A G++Y+ +G EA +A++ A + DP++ + A+VL
Sbjct: 90 CFTEAVKVDPKNACALTHCGMIYKDEGHLVEAAEAYQKARSADPSYKAASEFLAIVLTDL 149
Query: 524 ----KLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAA-ECFEAAA 578
KL+ + I+ + AL +D + A+YNLG+ Y ++ + + A C+E AA
Sbjct: 150 GTSLKLAGNTEDGIQKYC-EALEVDSHYAPAYYNLGVVY----SEMMQFDVALTCYEKAA 204
>sp|A2A6Q5|CDC27_MOUSE Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27
PE=1 SV=1
Length = 825
Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 497 AIKAFRSALNIDP--AHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNL 554
AIK F+ A+ +DP A+ +L+ VL + D++ A R+ A+R++ + +AWY L
Sbjct: 587 AIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRN----AIRVNPRHYNAWYGL 642
Query: 555 GLFYKSQ 561
G+ Y Q
Sbjct: 643 GMIYYKQ 649
>sp|Q4V8A2|CDC27_RAT Cell division cycle protein 27 homolog OS=Rattus norvegicus
GN=Cdc27 PE=2 SV=1
Length = 824
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 497 AIKAFRSALNIDP--AHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNL 554
AIK F+ A+ +DP A+ +L+ VL + D++ A R+ A+R++ + +AWY L
Sbjct: 586 AIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRN----AIRVNPRHYNAWYGL 641
Query: 555 GLFYKSQ 561
G+ Y Q
Sbjct: 642 GMIYYKQ 648
>sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27
PE=1 SV=2
Length = 824
Score = 39.3 bits (90), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 497 AIKAFRSALNIDP--AHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNL 554
AIK F+ A+ +DP A+ +L+ VL + D++ A R+ A+R++ + +AWY L
Sbjct: 586 AIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRN----AIRVNPRHYNAWYGL 641
Query: 555 GLFYKSQ 561
G+ Y Q
Sbjct: 642 GMIYYKQ 648
>sp|A7Z061|CDC27_BOVIN Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2
SV=1
Length = 825
Score = 39.3 bits (90), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 497 AIKAFRSALNIDP--AHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNL 554
AIK F+ A+ +DP A+ +L+ VL + D++ A R+ A+R++ + +AWY L
Sbjct: 587 AIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRN----AIRVNPRHYNAWYGL 642
Query: 555 GLFYKSQ 561
G+ Y Q
Sbjct: 643 GMIYYKQ 649
>sp|Q58350|Y940_METJA TPR repeat-containing protein MJ0940 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0940 PE=4 SV=1
Length = 318
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 354 GWLLMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQGQLKGAVETYTH 413
+++ A +L RYE+A +N L+ K + KA + G A++ Y
Sbjct: 154 AYIIKANMLRKLGRYEEALACVNKVLEL--KENDTNAIYLKALILNRIGNCDEALKYYEK 211
Query: 414 LLAALQVQTKTFSSDKRFYKGSANHARSLELEVWLDLAFIYINLSQWHDAEICLSKSEAI 473
L+ L V +EV + ++ ++ AE + +
Sbjct: 212 LIDELNVTW---------------------IEVIREAIYLSFLFNKLDKAEKYIEMGLKL 250
Query: 474 SSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKL 525
AS + G LYEK+ ++EA+K + A+ + P H +L++ A VL KL
Sbjct: 251 RPDDASLWYFKGKLYEKQNKFEEALKYYNKAIQLMPHHTKALLAKARVLEKL 302
>sp|Q58823|Y1428_METJA TPR repeat-containing protein MJ1428 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1428 PE=4 SV=1
Length = 567
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 482 HATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRK 524
+ G +Y K G YK+A ++F +AL ++P + +L S A+VL K
Sbjct: 383 YVKGYIYYKLGNYKDAYESFMNALRVNPKDISTLKSLAIVLEK 425
>sp|P14922|CYC8_YEAST General transcriptional corepressor CYC8 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CYC8 PE=1
SV=2
Length = 966
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 402 GQLKGAVETYTHLLAALQVQTKTFSSDKRFYKGSANHARSLELEVWLDLAFIY-INLSQW 460
G+ +GA E Y H+LA Q +HA+ L+ L +Y ++ Q+
Sbjct: 238 GEWQGAKEAYEHVLAQNQ-----------------HHAKVLQ-----QLGCLYGMSNVQF 275
Query: 461 HDAEICLS---KSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLIS 517
+D + L KS A+ + G ++ + Y A AF+ A+N D + S
Sbjct: 276 YDPQKALDYLLKSLEADPSDATTWYHLGRVHMIRTDYTAAYDAFQQAVNRDSRNPIFWCS 335
Query: 518 TAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAA 577
V+ ++S +A+ A+RL+ S WY+LG Y++ Q S +A + ++ A
Sbjct: 336 IGVLYYQISQYRDAL--DAYTRAIRLNPYISEVWYDLGTLYETCNNQLS--DALDAYKQA 391
Query: 578 ASLE 581
A L+
Sbjct: 392 ARLD 395
>sp|Q8C1Z7|BBS4_MOUSE Bardet-Biedl syndrome 4 protein homolog OS=Mus musculus GN=Bbs4
PE=2 SV=1
Length = 520
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 446 VWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSAL 505
+W ++ + ++ A CL ++ ++ + + G+++ Y A +A+
Sbjct: 272 LWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAI 331
Query: 506 NIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQS 565
N P + AV L L D NA R + A+RLD N N + +QG +
Sbjct: 332 NFQPKMGELYMLLAVALTNLEDIENA--RRAYVEAVRLDKCNPLVNLNYAVLLYNQGEKK 389
Query: 566 SKLEAAECFEAAAS-LEETAPVE 587
S L + E + L++ +P+E
Sbjct: 390 SALAQYQEMEKKVNFLKDNSPLE 412
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 37.7 bits (86), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 464 EICLSKSEAISSYSASKCHATGVLY------EKKGLYKEAIKAFRSALNIDPAHVPSLIS 517
EI LS+ S + H V Y + +G KEAI +R+AL + P H +L +
Sbjct: 463 EIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNN 522
Query: 518 TAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQ 561
+ R A + + AL+L ++ A +NLG KSQ
Sbjct: 523 LGTLTR-----DTAEAKMYYQRALQLHPQHNRALFNLGNLLKSQ 561
>sp|O60184|CYC8_SCHPO General transcriptional corepressor ssn6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ssn6 PE=1 SV=1
Length = 1102
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 429 KRFYKGSANHARSLELEVWL-----------DLAFIYINLSQWHDAEICLSKSEAISSYS 477
+R + NHA+ L+ WL DLA Y L+KS
Sbjct: 536 ERVLAETPNHAKVLQQLGWLCHQQSSSFTNQDLAIQY------------LTKSLEADDTD 583
Query: 478 ASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFL 537
A + G Y + Y +A +A++ A+ D P+ + VL +Q + ++
Sbjct: 584 AQSWYLIGRCYVAQQKYNKAYEAYQQAVYRD-GRNPTFWCSIGVLYYQINQYQDALDAYS 642
Query: 538 MAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEETAP 585
A +RL+ S WY+LG Y+S Q S +A + ++ AA L+ T P
Sbjct: 643 RA-IRLNPYISEVWYDLGTLYESCHNQIS--DALDAYQRAAELDPTNP 687
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 464 EICLSKSEAISSYSASKCHATGVLY------EKKGLYKEAIKAFRSALNIDPAHVPSLIS 517
EI LS+ S + H V Y + +G KEAI +R+AL + P H +L +
Sbjct: 523 EIWLSRESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNN 582
Query: 518 TAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQ 561
+ + +++ + + AL+L ++ A +NLG KSQ
Sbjct: 583 LGTLTKDMAEA-----KMYYQKALQLHPQHNRALFNLGNLLKSQ 621
>sp|P10505|APC3_SCHPO Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3
Length = 665
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 74/199 (37%), Gaps = 32/199 (16%)
Query: 353 KGWLLMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQGQLKGAVETY- 411
+ W ++A S Q+ + A +N A+ +E L QG A E Y
Sbjct: 432 ESWCILANCFSLQREHSQALKCINRAIQLDPTFEYAYTL---------QGHEHSANEEYE 482
Query: 412 ---THLLAALQVQTKTFSSDKRFYKGSANHARSLELEVWLDLAFIYINLSQWHDAEICLS 468
T A++V + +++ W L +Y+ + A+
Sbjct: 483 KSKTSFRKAIRVNVRHYNA-------------------WYGLGMVYLKTGRNDQADFHFQ 523
Query: 469 KSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQ 528
++ I+ ++ G++YE+ YK+A+ + A +D + A VL L D
Sbjct: 524 RAAEINPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDH 583
Query: 529 SNAVIRSFLMAALRLDGMN 547
A++ + A+ D N
Sbjct: 584 DKALVELEQLKAIAPDEAN 602
>sp|Q9M8Y0|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SEC OS=Arabidopsis
thaliana GN=SEC PE=2 SV=1
Length = 977
Score = 36.2 bits (82), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 5/140 (3%)
Query: 445 EVWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSA 504
+ W +LA Y+ + +A C ++ +++ G L + +GL EA + A
Sbjct: 156 DAWSNLASAYMRKGRLSEATQCCQQALSLNPLLVDAHSNLGNLMKAQGLIHEAYSCYLEA 215
Query: 505 LNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQ 564
+ I P + + A + + D + A+ + A++L A+ NLG YK+ G
Sbjct: 216 VRIQPTFAIAWSNLAGLFMESGDLNRAL--QYYKEAVKLKPAFPDAYLNLGNVYKALGRP 273
Query: 565 SSKLEAAECFEAAASLEETA 584
+ EA C++ A + +
Sbjct: 274 T---EAIMCYQHALQMRPNS 290
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 437 NHARSLELEVWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKE 496
NH +++ +L IY+ + A + A+++ ++ + ++Y+++G Y +
Sbjct: 357 NHPQAMA-----NLGNIYMEWNMMGPASSLFKATLAVTTGLSAPFNNLAIIYKQQGNYSD 411
Query: 497 AIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGL 556
AI + L IDP +L++ +++ + A+ M A+ + A NL
Sbjct: 412 AISCYNEVLRIDPLAADALVNRGNTYKEIGRVTEAI--QDYMHAINFRPTMAEAHANLAS 469
Query: 557 FYKSQG 562
YK G
Sbjct: 470 AYKDSG 475
>sp|P19737|Y425_SYNP2 TPR repeat-containing protein SYNPCC7002_A0425 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A0425 PE=4 SV=2
Length = 387
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Query: 440 RSLELEVWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIK 499
R + E+ + A + L+ A L ++ +S+ ++ G +YE + L +AI
Sbjct: 229 RPNDAELRIKAAVTWFGLNDRDQAIAFLEEARRLSTRDSAMQIRVGKIYETQNLLPQAIA 288
Query: 500 AFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYK 559
A+ A +DP + K D NA+I A L + +A+YN +
Sbjct: 289 AYEQASFVDPQSREAFALYGSAAMKTEDYINAII--AYRALTELSPTDPAAFYNFAVAL- 345
Query: 560 SQGTQSSKLEAAECFEAAASL 580
QG + S+ EA E E A L
Sbjct: 346 -QGRRRSR-EALEALEMARDL 364
>sp|Q95LN2|TTC18_MACFA Tetratricopeptide repeat protein 18 OS=Macaca fascicularis GN=TTC18
PE=2 SV=2
Length = 1009
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 493 LYKEAIKA---FRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSS 549
L ++ IKA FR AL+++ +H+ SL+ V+ L + A I F A L+ N
Sbjct: 681 LTEDNIKAQECFRKALSLNQSHIHSLLLCGVLAVLLENYEQAEI--FFEDATCLEPTNVV 738
Query: 550 AWYNLGLFYKSQGT 563
AW LGL+Y+ Q
Sbjct: 739 AWTLLGLYYEIQNN 752
>sp|Q04364|YMP8_YEAST TPR repeat-containing protein YMR018W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YMR018W PE=1 SV=1
Length = 514
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 486 VLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDG 545
VL + E + AF +A++ DP+H+ + + +V + +SN + L L LD
Sbjct: 227 VLMDNGSNLNEVVMAFEAAISQDPSHINAWLKLGIVNFENESESNGELA--LRNCLNLDP 284
Query: 546 MNSSAWYNLGLFYKSQGTQSSKLE 569
N+ A NL + + +Q +S L+
Sbjct: 285 NNTIALENLAIHHINQQNESESLK 308
>sp|Q9FMA3|PEX5_ARATH Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5
PE=1 SV=1
Length = 728
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 485 GVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLD 544
GVLY + AI +F++AL + P SL + + S QS I ++ AL L
Sbjct: 597 GVLYNLSREFDRAITSFQTALQLKPNDY-SLWNKLGATQANSVQSADAISAY-QQALDLK 654
Query: 545 GMNSSAWYNLGLFYKSQG 562
AW N+G+ Y +QG
Sbjct: 655 PNYVRAWANMGISYANQG 672
>sp|Q99LG4|TTC5_MOUSE Tetratricopeptide repeat protein 5 OS=Mus musculus GN=Ttc5 PE=1
SV=2
Length = 440
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 462 DAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVV 521
+AE+ LSK+ + + G +Y KKG A F AL V SL + ++V
Sbjct: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKV-SLQNLSMV 145
Query: 522 LRKL-----SDQSNAVIRSFLMA--ALRLDGMNSSAWYNLGLFYKS 560
LR+L + S V+ S A A+++D ++ +WY LG Y S
Sbjct: 146 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLS 191
>sp|O74985|NAT1_SCHPO N-terminal acetyltransferase A complex subunit nat1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=nat1 PE=3 SV=1
Length = 729
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 463 AEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVL 522
A++ LS E +A KC+ T YK+ +KA L P H SL ++L
Sbjct: 2 AKVQLSPKEITLFRTALKCYETKQ-------YKKGLKAIEPLLERHPEHGESLAIKGILL 54
Query: 523 RKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLEE 582
L + L LR D + W+ GL ++ ++AA+C+ A LE+
Sbjct: 55 HSLGNTKEGYDNVRL--GLRNDVGSGVCWHIFGLISRA---DKDYVQAAKCYINAHKLEK 109
Query: 583 T 583
Sbjct: 110 N 110
>sp|Q6FM42|PEX5_CANGA Peroxisomal targeting signal receptor OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX5 PE=3 SV=1
Length = 590
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 486 VLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDG 545
+L E EA AF +A+ DP HV + + +V + + N + S L L+LD
Sbjct: 294 ILMENGAKLSEAALAFEAAIKQDPKHVDAWLKLGIVQIQNEKELNGM--SALETCLKLDP 351
Query: 546 MNSSAWYNLGLFYKSQG 562
N A NL + Y ++G
Sbjct: 352 NNLEAMKNLAISYINEG 368
>sp|P34231|YKS7_YEAST Uncharacterized protein YKL187C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKL187C PE=1 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 246 DLAEEGATFASRALECLGDGCDQMESTANCLLGISLSAQSKVAITDFDRATRQAKALQAL 305
DL E+ T +S A + ME++ N + ++ S QS A+T+ ++T+Q L +
Sbjct: 307 DLLEQNLTQSSSAKKAFAALTQLMENSDNSTMVVT-SVQSLAAVTNTTQSTQQLIGLDDV 365
Query: 306 VSAARSTNMRDLSILYRL 323
+S++ +TN LSIL L
Sbjct: 366 ISSSSNTN-ETLSILSEL 382
>sp|Q5BK48|TTC5_RAT Tetratricopeptide repeat protein 5 OS=Rattus norvegicus GN=Ttc5
PE=2 SV=1
Length = 440
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 462 DAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVV 521
+AE+ LSK+ + + G +Y KKG A F AL V SL + ++V
Sbjct: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCKNKV-SLQNLSMV 145
Query: 522 LRKL-----SDQSNAVIRSFLMA--ALRLDGMNSSAWYNLGLFYKS 560
LR+L + S V+ S A A+++D ++ +WY LG Y S
Sbjct: 146 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLS 191
>sp|O67178|Y1088_AQUAE Uncharacterized protein aq_1088 OS=Aquifex aeolicus (strain VF5)
GN=aq_1088 PE=3 SV=1
Length = 761
Score = 33.5 bits (75), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 449 DLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVLYEKKGLYKEAIKAFRSALNID 508
DL +Y L + DAE L K+ S + G LY +G +EA + AL+++
Sbjct: 74 DLGLLYFFLGRVEDAERVLKKALKFSDVDDALYARLGALYYSQGKLEEAQHYWERALSLN 133
Query: 509 PAHVPSLISTAVV 521
P V L + V+
Sbjct: 134 PNKVEILYNLGVL 146
>sp|Q5T0N1|TTC18_HUMAN Tetratricopeptide repeat protein 18 OS=Homo sapiens GN=TTC18 PE=2
SV=2
Length = 1121
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 493 LYKEAIKA---FRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMNSS 549
L ++ IKA F+ AL+++ +H+ SL+ V+ L + A I F A L+ N
Sbjct: 681 LTEDNIKAQECFQKALSLNQSHIHSLLLCGVLAVLLENYEQAEI--FFEDATCLEPTNVV 738
Query: 550 AWYNLGLFYKSQGT 563
AW LGL+Y+ Q
Sbjct: 739 AWTLLGLYYEIQNN 752
>sp|P17885|BIMA_EMENI Protein bimA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=bimA PE=2 SV=1
Length = 806
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 483 ATGVLYEKKGLYKEAIKAFRSALNIDP--AHVPSLISTAVVLRKLSDQSNAVIRSFLMAA 540
A G + + + +A+K F+ A +DP A+ +L V + D++ RS + A
Sbjct: 586 AVGNSFSHQRDHDQALKCFKRATQLDPHFAYGFTLQGHEYVANEEYDKALDAYRSGINA- 644
Query: 541 LRLDGMNSSAWYNLGLFYKSQGTQSSKLEAAE-CFEAAASLEETAPV 586
D + +AWY LG Y G KL+ AE F AA + + V
Sbjct: 645 ---DSRHYNAWYGLGTVYDKMG----KLDFAEQHFRNAAKINPSNAV 684
>sp|O77033|CYC8_DICDI General transcriptional corepressor trfA OS=Dictyostelium
discoideum GN=trfA PE=2 SV=1
Length = 1390
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 108/274 (39%), Gaps = 48/274 (17%)
Query: 339 YAKMLLKLEGGSNLKGWLLMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKV- 397
Y + L L + W + + Y+ AE A L K+E+ + + V
Sbjct: 262 YQQALYHLPNPKDPNLWYGIGILYDRYGSYDHAEEAFTAVLKMDNKFEKSTEIYFRLGVL 321
Query: 398 QLVQGQLKGAVETYTHLL--AALQVQT--------------KTFSSDKRFY----KGSAN 437
QG+ ++E + HL+ L + T K + K Y K +A
Sbjct: 322 YKHQGKYDQSLEYFQHLVKNPPLPLTTSDIWFQIGHVYELQKEYHKSKDAYEKVLKDNAT 381
Query: 438 HARSLELEVWL----------DLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVL 487
H++ L+ WL + A Y+ S I S+A + Y +C+ T
Sbjct: 382 HSKVLQQLGWLYHHNPLFTNQEYAINYLMRS------IDSDSSDAQTWYLLGRCYMT--- 432
Query: 488 YEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDGMN 547
+ YK+A A++ A+ D P+ + VL +Q + ++ A +RL+
Sbjct: 433 ---QQKYKKAYDAYQQAVYRD-GRNPTFWCSIGVLYYQINQYRDALDAYTRA-IRLNPFL 487
Query: 548 SSAWYNLGLFYKSQGTQSSKLEAAECFEAAASLE 581
S WY+LG Y+S + L+A ++ AA L+
Sbjct: 488 SEVWYDLGTLYESCHQHTDSLDA---YQRAAELD 518
>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus
GN=Tmtc3 PE=2 SV=2
Length = 920
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 433 KGSANHARSLELE-----VWLDLAFIYINLSQWHDAEICLSKSEAISSYSASKCHATGVL 487
K + ++LEL+ +W +LA +YI L + ++A +++ ++ + +L
Sbjct: 586 KAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAIL 645
Query: 488 YEKKG---LYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLD 544
++ G L EA K + +N +P + ++ + D+ ++ S++ A++L
Sbjct: 646 MQESGEVKLRPEARKRLLNYVNEEPQDANGYFNLGML--AMDDKKDSEAESWMKKAIKLQ 703
Query: 545 GMNSSAWYNLGLFYKSQGTQSSKLEAAE 572
SA +NL L Y + L E
Sbjct: 704 PDFRSALFNLALLYSQTAKELKALPILE 731
>sp|Q6CT48|PEX5_KLULA Peroxisomal targeting signal receptor OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=PEX5 PE=3 SV=1
Length = 566
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 486 VLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALRLDG 545
+L E EA AF +A+ DPAHV + + +V + + N + S L L LD
Sbjct: 286 ILMENGAKLSEAALAFEAAVQEDPAHVDAWLKLGLVQTQNEKEMNGI--SALEQCLSLDP 343
Query: 546 MNSSAWYNLGLFYKSQG 562
N A + + Y ++G
Sbjct: 344 TNQQALMTISISYINEG 360
>sp|Q8LGU6|CD27B_ARATH Cell division cycle protein 27 homolog B OS=Arabidopsis thaliana
GN=CDC27B PE=1 SV=1
Length = 744
Score = 33.1 bits (74), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 483 ATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVVLRKLSDQSNAVIRSFLMAALR 542
A G Y + ++ A+K F A+ ++P + L D N ++S+ ALR
Sbjct: 523 AMGNCYSLQKDHETALKNFLRAVQLNPRFAYAHTLCGHEYTTLEDFENG-MKSY-QNALR 580
Query: 543 LDGMNSSAWYNLGLFYKSQGTQSSKLEAAE 572
+D + +AWY LG+ Y Q KLE +E
Sbjct: 581 VDTRHYNAWYGLGMIYLRQ----EKLEFSE 606
>sp|A2Z9W7|MRS2G_ORYSI Putative magnesium transporter MRS2-G OS=Oryza sativa subsp. indica
GN=MRS2-G PE=3 SV=2
Length = 468
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 294 RATRQAKALQALVSAARS-------TNMRDLSILYRLSLEYAEQRKLNAAHYYAKMLL-- 344
R Q + ++AL+S+A S T++ L+ +R S+ A L+ +MLL
Sbjct: 301 RKQLQNQQVEALISSAASNSIVPGGTSLSRLNNSFRRSVSIATSMHLDNDVEDLEMLLEA 360
Query: 345 ---KLEGGSNLKGWLLMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQ 401
+L+G N RILS ++ +D E +N LD ++ EL+ + ++ L
Sbjct: 361 YFMQLDGIRN--------RILSVREYIDDTEDYVNIQLDN----QRNELI--QLQLTLTI 406
Query: 402 GQLKGAVETYTHLLAALQVQTKTFSSD 428
AV T+ A+ +Q+K +S D
Sbjct: 407 ASFGIAVNTFIAGAFAMNIQSKLYSID 433
>sp|A3BV82|MRS2G_ORYSJ Putative magnesium transporter MRS2-G OS=Oryza sativa subsp.
japonica GN=MRS2-G PE=1 SV=2
Length = 468
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 294 RATRQAKALQALVSAARS-------TNMRDLSILYRLSLEYAEQRKLNAAHYYAKMLL-- 344
R Q + ++AL+S+A S T++ L+ +R S+ A L+ +MLL
Sbjct: 301 RKQLQNQQVEALISSAASNSIVPGGTSLSRLNNSFRRSVSIATSMHLDNDVEDLEMLLEA 360
Query: 345 ---KLEGGSNLKGWLLMARILSAQKRYEDAETILNAALDQTGKWEQGELLRTKAKVQLVQ 401
+L+G N RILS ++ +D E +N LD ++ EL+ + ++ L
Sbjct: 361 YFMQLDGIRN--------RILSVREYIDDTEDYVNIQLDN----QRNELI--QLQLTLTI 406
Query: 402 GQLKGAVETYTHLLAALQVQTKTFSSD 428
AV T+ A+ +Q+K +S D
Sbjct: 407 ASFGIAVNTFIAGAFAMNIQSKLYSID 433
>sp|Q17QZ7|TTC27_BOVIN Tetratricopeptide repeat protein 27 OS=Bos taurus GN=TTC27 PE=2
SV=1
Length = 847
Score = 32.7 bits (73), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 31/157 (19%)
Query: 431 FYKGSANHARSL--ELEVWLDLAFIYINLSQWHDAEICL----SKSEAISSY-------- 476
F G N A + +LE+W D+ Y Q AE L K E S Y
Sbjct: 455 FELGCTNSALQIFEKLEMWEDVVICYERAGQHGKAEEILRQELEKKETPSLYCLLGDVLR 514
Query: 477 ---------------SASKCHATGVLYEKKGLYKEAIKAFRSALNIDPAHVPSLISTAVV 521
SA + G+L+ + +KE ++ F +L I+P + S
Sbjct: 515 DHSYYDQAWELSRHRSARAQRSKGLLHLRSREFKECVECFERSLKINPMQLGVWFSLGCA 574
Query: 522 LRKLSDQSNAVIRSFLMAALRLDGMNSSAWYNLGLFY 558
L D + R+F + L+ N+ AW NL Y
Sbjct: 575 YLALEDYGGSA-RAF-QRCVTLEPDNAEAWNNLSTSY 609
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,139,787
Number of Sequences: 539616
Number of extensions: 7227861
Number of successful extensions: 17666
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 17475
Number of HSP's gapped (non-prelim): 241
length of query: 590
length of database: 191,569,459
effective HSP length: 123
effective length of query: 467
effective length of database: 125,196,691
effective search space: 58466854697
effective search space used: 58466854697
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)