Query 007782
Match_columns 590
No_of_seqs 236 out of 1363
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 10:22:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 3E-207 1E-211 1664.9 45.3 539 50-590 1-541 (555)
2 1pj3_A NAD-dependent malic enz 100.0 2E-206 8E-211 1662.0 44.5 540 50-590 3-546 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-206 6E-211 1667.6 42.8 543 46-590 33-578 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-122 9E-127 985.3 30.9 385 125-581 53-449 (487)
5 2a9f_A Putative malic enzyme ( 100.0 5E-114 2E-118 911.3 18.0 361 120-561 23-390 (398)
6 1vl6_A Malate oxidoreductase; 100.0 2E-108 7E-113 867.5 23.1 354 120-558 27-388 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 3.1E-87 1.1E-91 717.2 25.7 385 120-586 21-420 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 1.7E-08 5.6E-13 108.6 15.4 168 252-458 112-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 9.1E-09 3.1E-13 110.7 11.3 130 297-460 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 1.3E-06 4.5E-11 92.5 7.2 219 165-448 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.9 6.4E-05 2.2E-09 81.5 11.9 128 297-458 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.8 5.8E-05 2E-09 82.4 10.0 132 297-461 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.2 0.0034 1.2E-07 65.6 13.9 225 166-447 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.0 0.00069 2.3E-08 72.4 6.2 110 327-454 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 96.9 0.0014 4.7E-08 69.6 7.0 100 328-448 182-305 (381)
16 3k92_A NAD-GDH, NAD-specific g 96.7 0.029 9.9E-07 60.4 15.5 178 252-448 126-329 (424)
17 3d4o_A Dipicolinate synthase s 96.3 0.024 8.1E-07 56.8 11.3 122 308-458 133-255 (293)
18 3aoe_E Glutamate dehydrogenase 96.3 0.067 2.3E-06 57.4 15.3 186 252-460 123-332 (419)
19 4fcc_A Glutamate dehydrogenase 96.2 0.25 8.4E-06 53.6 19.5 183 251-448 140-354 (450)
20 1a4i_A Methylenetetrahydrofola 96.0 0.014 4.7E-07 60.3 8.1 96 308-447 143-239 (301)
21 3r3j_A Glutamate dehydrogenase 95.9 0.43 1.5E-05 51.8 19.4 190 252-460 145-368 (456)
22 3jyo_A Quinate/shikimate dehyd 95.9 0.016 5.5E-07 58.6 7.8 88 314-421 111-205 (283)
23 3l07_A Bifunctional protein fo 95.8 0.02 6.9E-07 58.6 8.5 83 310-430 141-224 (285)
24 3p2o_A Bifunctional protein fo 95.5 0.032 1.1E-06 57.1 8.5 92 309-444 139-231 (285)
25 3ngx_A Bifunctional protein fo 95.4 0.031 1.1E-06 57.0 8.0 82 308-429 130-212 (276)
26 3aog_A Glutamate dehydrogenase 95.4 0.22 7.7E-06 53.7 14.9 178 253-448 141-344 (440)
27 1b0a_A Protein (fold bifunctio 95.3 0.029 1E-06 57.5 7.5 96 308-447 137-233 (288)
28 2yfq_A Padgh, NAD-GDH, NAD-spe 95.3 0.28 9.4E-06 52.7 15.2 178 253-448 117-326 (421)
29 4a5o_A Bifunctional protein fo 95.2 0.041 1.4E-06 56.4 8.2 95 310-448 141-237 (286)
30 3tri_A Pyrroline-5-carboxylate 95.2 0.069 2.4E-06 53.2 9.7 121 330-479 3-127 (280)
31 1edz_A 5,10-methylenetetrahydr 95.2 0.03 1E-06 58.1 7.1 113 312-448 150-278 (320)
32 3don_A Shikimate dehydrogenase 95.1 0.022 7.6E-07 57.6 5.8 86 314-421 101-186 (277)
33 4a26_A Putative C-1-tetrahydro 95.0 0.046 1.6E-06 56.4 7.7 95 307-445 142-239 (300)
34 2bma_A Glutamate dehydrogenase 95.0 0.54 1.9E-05 51.2 16.4 179 253-448 159-372 (470)
35 3oj0_A Glutr, glutamyl-tRNA re 94.9 0.012 4.3E-07 52.2 3.0 88 308-421 4-91 (144)
36 1v9l_A Glutamate dehydrogenase 94.8 0.29 9.9E-06 52.6 13.7 177 253-448 116-325 (421)
37 4e12_A Diketoreductase; oxidor 94.8 0.054 1.9E-06 53.7 7.4 98 331-450 5-124 (283)
38 1gpj_A Glutamyl-tRNA reductase 94.7 0.17 5.7E-06 53.2 11.4 102 327-448 164-269 (404)
39 1c1d_A L-phenylalanine dehydro 94.7 0.14 4.7E-06 53.8 10.5 166 255-452 93-269 (355)
40 3t4e_A Quinate/shikimate dehyd 94.7 0.047 1.6E-06 56.2 6.8 90 315-421 133-231 (312)
41 2tmg_A Protein (glutamate dehy 94.6 0.86 2.9E-05 48.8 16.6 178 253-448 115-319 (415)
42 1v8b_A Adenosylhomocysteinase; 94.6 0.13 4.6E-06 56.0 10.5 123 305-460 235-357 (479)
43 2egg_A AROE, shikimate 5-dehyd 94.5 0.034 1.2E-06 56.2 5.4 87 315-421 125-215 (297)
44 2rir_A Dipicolinate synthase, 94.3 0.085 2.9E-06 52.9 7.6 110 321-458 148-257 (300)
45 1bgv_A Glutamate dehydrogenase 94.1 1.4 4.9E-05 47.7 17.0 178 254-448 137-350 (449)
46 3u62_A Shikimate dehydrogenase 94.1 0.07 2.4E-06 53.0 6.4 124 261-420 42-176 (253)
47 2c2x_A Methylenetetrahydrofola 94.0 0.11 3.7E-06 53.2 7.7 98 308-447 136-234 (281)
48 1pjc_A Protein (L-alanine dehy 93.8 0.11 3.8E-06 53.7 7.5 96 328-447 165-269 (361)
49 1leh_A Leucine dehydrogenase; 93.8 0.12 4.2E-06 54.2 7.8 159 258-448 93-264 (364)
50 2dpo_A L-gulonate 3-dehydrogen 93.6 0.19 6.4E-06 51.6 8.7 123 330-478 6-151 (319)
51 1mld_A Malate dehydrogenase; o 93.3 0.22 7.5E-06 50.8 8.6 101 332-448 2-120 (314)
52 1hyh_A L-hicdh, L-2-hydroxyiso 93.3 0.1 3.6E-06 52.4 6.1 102 331-449 2-126 (309)
53 3u95_A Glycoside hydrolase, fa 93.2 0.14 4.9E-06 55.4 7.4 44 426-472 140-183 (477)
54 3fbt_A Chorismate mutase and s 93.1 0.13 4.5E-06 52.1 6.6 49 315-374 107-155 (282)
55 3tnl_A Shikimate dehydrogenase 93.0 0.15 5.1E-06 52.5 7.0 50 314-374 138-187 (315)
56 2hk9_A Shikimate dehydrogenase 93.0 0.22 7.5E-06 49.4 7.9 84 315-421 114-197 (275)
57 3o8q_A Shikimate 5-dehydrogena 93.0 0.14 4.7E-06 51.8 6.5 50 314-374 110-159 (281)
58 2ewd_A Lactate dehydrogenase,; 92.9 0.14 4.8E-06 51.7 6.5 98 331-449 5-125 (317)
59 3d64_A Adenosylhomocysteinase; 92.9 0.31 1E-05 53.3 9.6 99 322-448 269-367 (494)
60 1pzg_A LDH, lactate dehydrogen 92.9 0.16 5.4E-06 52.2 6.9 101 331-449 10-136 (331)
61 2o4c_A Erythronate-4-phosphate 92.7 0.74 2.5E-05 48.6 11.9 185 298-529 81-281 (380)
62 3pwz_A Shikimate dehydrogenase 92.6 0.15 5.1E-06 51.3 6.1 98 261-374 44-153 (272)
63 3mw9_A GDH 1, glutamate dehydr 92.5 0.75 2.6E-05 50.5 11.8 179 252-448 136-352 (501)
64 3tum_A Shikimate dehydrogenase 92.4 0.21 7.2E-06 50.3 6.8 49 315-374 110-158 (269)
65 2v6b_A L-LDH, L-lactate dehydr 92.0 0.056 1.9E-06 54.7 2.2 104 332-449 2-120 (304)
66 3dtt_A NADP oxidoreductase; st 92.0 0.14 4.9E-06 49.6 5.0 109 324-448 13-127 (245)
67 1gtm_A Glutamate dehydrogenase 92.0 1.2 4.1E-05 47.6 12.5 114 253-378 115-250 (419)
68 2eez_A Alanine dehydrogenase; 91.9 0.27 9.2E-06 50.9 7.3 97 327-447 163-268 (369)
69 2i6t_A Ubiquitin-conjugating e 91.8 0.31 1.1E-05 49.6 7.4 101 331-449 15-129 (303)
70 2d5c_A AROE, shikimate 5-dehyd 91.8 0.28 9.6E-06 48.0 6.9 81 315-421 102-182 (263)
71 3fef_A Putative glucosidase LP 91.7 0.22 7.4E-06 53.9 6.4 106 328-448 3-149 (450)
72 1o6z_A MDH, malate dehydrogena 91.7 0.21 7.3E-06 50.5 6.0 103 332-448 2-122 (303)
73 3oet_A Erythronate-4-phosphate 91.6 1 3.5E-05 47.7 11.3 120 297-448 83-213 (381)
74 1x7d_A Ornithine cyclodeaminas 91.6 0.27 9.3E-06 51.1 6.8 114 315-456 116-238 (350)
75 2ekl_A D-3-phosphoglycerate de 91.5 1.8 6.1E-05 44.1 12.7 121 297-446 90-233 (313)
76 3ce6_A Adenosylhomocysteinase; 91.4 1.3 4.5E-05 48.3 12.2 108 322-460 266-374 (494)
77 1b8p_A Protein (malate dehydro 91.3 0.24 8.2E-06 50.6 5.9 111 331-448 6-136 (329)
78 1obb_A Maltase, alpha-glucosid 91.2 0.27 9.4E-06 53.5 6.6 124 330-471 3-174 (480)
79 1a5z_A L-lactate dehydrogenase 91.2 0.37 1.3E-05 48.9 7.2 98 332-449 2-120 (319)
80 1nyt_A Shikimate 5-dehydrogena 91.0 0.35 1.2E-05 47.8 6.7 49 314-374 103-151 (271)
81 1zud_1 Adenylyltransferase THI 91.0 0.23 7.8E-06 49.0 5.3 37 327-374 25-61 (251)
82 2g1u_A Hypothetical protein TM 90.9 0.38 1.3E-05 43.0 6.3 102 326-446 15-119 (155)
83 1ldn_A L-lactate dehydrogenase 90.8 0.11 3.9E-06 52.7 3.1 105 331-448 7-126 (316)
84 2hjr_A Malate dehydrogenase; m 90.8 0.18 6.1E-06 51.7 4.5 128 331-475 15-160 (328)
85 2gcg_A Glyoxylate reductase/hy 90.7 2 6.9E-05 43.8 12.2 140 278-446 80-247 (330)
86 2zqz_A L-LDH, L-lactate dehydr 90.6 0.21 7.3E-06 51.3 4.8 105 331-448 10-128 (326)
87 1p77_A Shikimate 5-dehydrogena 90.6 0.29 9.8E-06 48.5 5.6 49 314-374 103-151 (272)
88 3hdj_A Probable ornithine cycl 90.5 0.97 3.3E-05 46.2 9.7 111 317-458 110-227 (313)
89 1t2d_A LDH-P, L-lactate dehydr 90.5 0.24 8.3E-06 50.7 5.2 102 331-450 5-131 (322)
90 1ez4_A Lactate dehydrogenase; 90.3 0.26 8.8E-06 50.5 5.1 105 331-448 6-124 (318)
91 2dbq_A Glyoxylate reductase; D 90.3 3.4 0.00011 42.3 13.4 121 297-446 89-241 (334)
92 1lu9_A Methylene tetrahydromet 89.8 1.3 4.6E-05 43.6 9.7 82 279-374 63-152 (287)
93 1y6j_A L-lactate dehydrogenase 89.7 0.37 1.3E-05 49.1 5.7 100 331-448 8-126 (318)
94 2rcy_A Pyrroline carboxylate r 89.7 1.7 5.9E-05 41.6 10.2 92 330-449 4-95 (262)
95 2hmt_A YUAA protein; RCK, KTN, 89.5 0.23 7.9E-06 42.5 3.4 103 328-448 4-108 (144)
96 1guz_A Malate dehydrogenase; o 89.5 0.71 2.4E-05 46.6 7.5 100 332-448 2-121 (310)
97 3vku_A L-LDH, L-lactate dehydr 89.4 0.35 1.2E-05 50.0 5.3 107 329-448 8-128 (326)
98 3d0o_A L-LDH 1, L-lactate dehy 89.4 0.4 1.4E-05 48.9 5.7 107 329-448 5-126 (317)
99 3d1l_A Putative NADP oxidoredu 89.2 0.34 1.2E-05 46.9 4.8 99 326-448 6-105 (266)
100 1s6y_A 6-phospho-beta-glucosid 89.1 0.22 7.4E-06 53.7 3.6 127 331-471 8-175 (450)
101 3h5n_A MCCB protein; ubiquitin 89.0 1.1 3.8E-05 46.5 8.7 38 326-374 114-151 (353)
102 2vhw_A Alanine dehydrogenase; 88.8 0.42 1.4E-05 49.8 5.4 96 327-446 165-269 (377)
103 3ba1_A HPPR, hydroxyphenylpyru 88.5 2.5 8.5E-05 43.6 10.9 119 298-448 110-254 (333)
104 1omo_A Alanine dehydrogenase; 88.3 1.5 5E-05 44.7 9.0 112 315-456 112-229 (322)
105 4g2n_A D-isomer specific 2-hyd 88.3 3 0.0001 43.4 11.4 190 297-527 116-336 (345)
106 1u8x_X Maltose-6'-phosphate gl 88.2 0.32 1.1E-05 52.7 4.2 126 330-471 28-194 (472)
107 3jtm_A Formate dehydrogenase, 88.2 3.1 0.00011 43.2 11.5 174 297-501 108-309 (351)
108 1oju_A MDH, malate dehydrogena 88.1 0.39 1.3E-05 48.8 4.5 104 332-448 2-121 (294)
109 3k5p_A D-3-phosphoglycerate de 88.0 4.3 0.00015 43.4 12.7 193 296-527 101-322 (416)
110 1z82_A Glycerol-3-phosphate de 88.0 0.56 1.9E-05 47.3 5.6 95 330-450 14-116 (335)
111 3phh_A Shikimate dehydrogenase 88.0 1.4 4.7E-05 44.4 8.4 100 315-447 107-212 (269)
112 2i99_A MU-crystallin homolog; 87.9 1.3 4.5E-05 44.7 8.3 113 315-455 122-237 (312)
113 1lld_A L-lactate dehydrogenase 87.9 0.35 1.2E-05 48.2 4.0 102 331-449 8-128 (319)
114 1smk_A Malate dehydrogenase, g 87.9 0.61 2.1E-05 47.6 5.9 104 331-448 9-128 (326)
115 3h8v_A Ubiquitin-like modifier 87.8 0.55 1.9E-05 47.9 5.4 38 326-374 32-69 (292)
116 2xxj_A L-LDH, L-lactate dehydr 87.6 0.26 9E-06 50.2 2.9 104 332-448 2-119 (310)
117 1wwk_A Phosphoglycerate dehydr 87.6 3 0.0001 42.2 10.7 109 309-446 103-233 (307)
118 2zyd_A 6-phosphogluconate dehy 87.4 1.1 3.9E-05 48.2 7.9 102 327-448 12-116 (480)
119 3gvi_A Malate dehydrogenase; N 87.3 0.76 2.6E-05 47.3 6.2 106 328-448 5-127 (324)
120 1xdw_A NAD+-dependent (R)-2-hy 87.2 4.4 0.00015 41.5 11.8 137 278-446 73-235 (331)
121 1nvt_A Shikimate 5'-dehydrogen 87.2 0.5 1.7E-05 47.0 4.6 49 313-374 111-159 (287)
122 1up7_A 6-phospho-beta-glucosid 87.2 0.71 2.4E-05 49.2 6.1 124 331-471 3-164 (417)
123 1ur5_A Malate dehydrogenase; o 87.2 0.69 2.4E-05 46.8 5.7 104 331-448 3-122 (309)
124 3i83_A 2-dehydropantoate 2-red 87.2 0.85 2.9E-05 45.8 6.4 98 331-449 3-109 (320)
125 2j6i_A Formate dehydrogenase; 87.0 2.6 9E-05 43.9 10.1 144 278-447 88-259 (364)
126 4e21_A 6-phosphogluconate dehy 87.0 1.9 6.6E-05 44.7 9.1 95 328-447 20-117 (358)
127 3rui_A Ubiquitin-like modifier 86.9 0.44 1.5E-05 49.8 4.2 38 327-375 31-68 (340)
128 4huj_A Uncharacterized protein 86.9 0.68 2.3E-05 44.1 5.2 93 331-449 24-117 (220)
129 3gt0_A Pyrroline-5-carboxylate 86.8 1.2 4.1E-05 42.9 6.9 98 331-449 3-101 (247)
130 1sc6_A PGDH, D-3-phosphoglycer 86.7 7.7 0.00026 41.1 13.6 191 296-527 90-311 (404)
131 3kkj_A Amine oxidase, flavin-c 86.7 0.61 2.1E-05 41.1 4.4 31 332-374 4-34 (336)
132 1qp8_A Formate dehydrogenase; 86.6 7.2 0.00025 39.5 12.9 117 297-446 71-211 (303)
133 1npy_A Hypothetical shikimate 86.5 0.91 3.1E-05 45.4 6.1 48 315-374 105-152 (271)
134 1txg_A Glycerol-3-phosphate de 86.5 1.1 3.7E-05 44.5 6.6 94 332-448 2-107 (335)
135 3nep_X Malate dehydrogenase; h 86.5 0.43 1.5E-05 49.0 3.8 104 332-448 2-121 (314)
136 2cuk_A Glycerate dehydrogenase 86.4 5 0.00017 40.8 11.6 117 297-447 87-231 (311)
137 2d4a_B Malate dehydrogenase; a 86.3 0.68 2.3E-05 47.0 5.2 99 332-448 1-119 (308)
138 3p7m_A Malate dehydrogenase; p 86.2 0.46 1.6E-05 48.8 3.8 106 329-448 4-125 (321)
139 2d0i_A Dehydrogenase; structur 86.0 4.3 0.00015 41.6 11.0 91 326-446 142-236 (333)
140 4dgs_A Dehydrogenase; structur 85.9 4.8 0.00016 41.8 11.3 120 309-460 130-273 (340)
141 3ado_A Lambda-crystallin; L-gu 85.7 0.94 3.2E-05 46.7 5.9 33 330-374 6-38 (319)
142 4gsl_A Ubiquitin-like modifier 85.7 0.67 2.3E-05 52.0 5.1 38 327-375 323-360 (615)
143 4hy3_A Phosphoglycerate oxidor 85.7 2.8 9.5E-05 44.0 9.5 177 309-527 134-339 (365)
144 3tl2_A Malate dehydrogenase; c 85.7 0.58 2E-05 48.0 4.2 107 328-448 6-130 (315)
145 2p4q_A 6-phosphogluconate dehy 85.6 1.3 4.5E-05 48.0 7.2 98 331-448 11-112 (497)
146 1jw9_B Molybdopterin biosynthe 85.5 0.65 2.2E-05 45.6 4.3 38 327-375 28-65 (249)
147 2raf_A Putative dinucleotide-b 85.4 1.9 6.4E-05 40.8 7.4 80 326-449 15-94 (209)
148 1hdo_A Biliverdin IX beta redu 84.9 2.3 7.9E-05 38.2 7.5 98 330-445 3-111 (206)
149 3pqe_A L-LDH, L-lactate dehydr 84.9 0.51 1.8E-05 48.7 3.5 106 330-448 5-125 (326)
150 1hye_A L-lactate/malate dehydr 84.4 1.1 3.7E-05 45.4 5.5 102 332-448 2-125 (313)
151 2yq5_A D-isomer specific 2-hyd 84.3 11 0.00036 39.2 13.0 121 297-448 92-239 (343)
152 1ks9_A KPA reductase;, 2-dehyd 84.2 1.5 5.2E-05 42.2 6.2 95 332-448 2-100 (291)
153 3vh1_A Ubiquitin-like modifier 84.1 0.79 2.7E-05 51.3 4.7 38 326-374 323-360 (598)
154 3k6j_A Protein F01G10.3, confi 84.1 1.3 4.3E-05 48.1 6.2 36 485-520 232-267 (460)
155 1f0y_A HCDH, L-3-hydroxyacyl-C 84.0 0.91 3.1E-05 45.0 4.7 32 331-374 16-47 (302)
156 3lk7_A UDP-N-acetylmuramoylala 83.9 1.1 3.7E-05 47.6 5.5 121 327-485 6-126 (451)
157 3k96_A Glycerol-3-phosphate de 83.9 2.8 9.4E-05 43.4 8.4 102 330-449 29-137 (356)
158 1j4a_A D-LDH, D-lactate dehydr 83.8 12 0.00042 38.2 13.2 123 296-448 91-238 (333)
159 2w2k_A D-mandelate dehydrogena 83.7 8.7 0.0003 39.5 12.1 97 325-447 158-258 (348)
160 4ina_A Saccharopine dehydrogen 83.6 1.2 4.2E-05 46.6 5.7 96 331-446 2-108 (405)
161 3hg7_A D-isomer specific 2-hyd 83.4 2.6 9E-05 43.4 8.0 187 298-528 89-303 (324)
162 1y7t_A Malate dehydrogenase; N 83.2 0.73 2.5E-05 46.5 3.6 110 331-448 5-133 (327)
163 3evt_A Phosphoglycerate dehydr 82.6 3.9 0.00013 42.1 8.9 189 297-527 83-301 (324)
164 2pi1_A D-lactate dehydrogenase 82.6 7.7 0.00026 39.9 11.1 140 297-468 86-251 (334)
165 1dxy_A D-2-hydroxyisocaproate 82.4 12 0.00042 38.2 12.6 121 297-448 90-236 (333)
166 1pgj_A 6PGDH, 6-PGDH, 6-phosph 82.3 1.5 5E-05 47.2 5.8 97 332-448 3-106 (478)
167 1x0v_A GPD-C, GPDH-C, glycerol 82.2 2.5 8.6E-05 42.4 7.2 109 330-449 8-128 (354)
168 2ew2_A 2-dehydropantoate 2-red 82.1 0.62 2.1E-05 45.4 2.6 98 331-449 4-112 (316)
169 2vns_A Metalloreductase steap3 81.9 1.2 4.1E-05 42.3 4.5 96 326-449 24-119 (215)
170 3gvx_A Glycerate dehydrogenase 81.9 8.6 0.00029 38.9 11.0 160 326-529 118-283 (290)
171 2nac_A NAD-dependent formate d 81.9 5.9 0.0002 41.9 10.2 165 325-526 186-356 (393)
172 3b1f_A Putative prephenate deh 81.8 2.2 7.7E-05 41.6 6.5 96 330-447 6-103 (290)
173 1y8q_A Ubiquitin-like 1 activa 81.5 1.2 4.2E-05 46.0 4.7 37 327-374 33-69 (346)
174 2iz1_A 6-phosphogluconate dehy 81.2 2.2 7.6E-05 45.7 6.7 99 330-448 5-106 (474)
175 3pp8_A Glyoxylate/hydroxypyruv 81.2 4 0.00014 41.8 8.3 191 297-527 86-301 (315)
176 1jay_A Coenzyme F420H2:NADP+ o 80.8 0.73 2.5E-05 42.8 2.5 94 332-449 2-101 (212)
177 1hyu_A AHPF, alkyl hydroperoxi 80.8 1.3 4.5E-05 47.6 4.8 100 260-374 134-244 (521)
178 3abi_A Putative uncharacterize 80.6 0.92 3.2E-05 46.5 3.4 88 332-446 18-109 (365)
179 1yj8_A Glycerol-3-phosphate de 80.5 2 6.9E-05 44.0 5.9 108 331-449 22-145 (375)
180 3e8x_A Putative NAD-dependent 80.3 3.3 0.00011 38.7 6.9 97 326-445 17-131 (236)
181 2uyy_A N-PAC protein; long-cha 80.1 2.3 7.8E-05 42.2 5.9 32 331-374 31-62 (316)
182 3gg9_A D-3-phosphoglycerate de 79.9 6.8 0.00023 40.7 9.6 161 325-527 155-325 (352)
183 2x0j_A Malate dehydrogenase; o 79.9 2.3 7.7E-05 43.4 5.9 104 332-448 2-121 (294)
184 3fi9_A Malate dehydrogenase; s 79.8 2.3 7.8E-05 44.2 6.0 107 328-448 6-129 (343)
185 3vrd_B FCCB subunit, flavocyto 79.7 2 6.8E-05 43.6 5.5 35 330-374 2-36 (401)
186 3gpi_A NAD-dependent epimerase 79.7 1.6 5.6E-05 42.0 4.6 96 329-445 2-109 (286)
187 4dll_A 2-hydroxy-3-oxopropiona 79.7 1.5 5E-05 44.2 4.4 34 329-374 30-63 (320)
188 1gdh_A D-glycerate dehydrogena 79.6 11 0.00037 38.4 10.9 122 297-446 89-239 (320)
189 2h78_A Hibadh, 3-hydroxyisobut 79.5 1.6 5.6E-05 43.0 4.6 32 331-374 4-35 (302)
190 4fgw_A Glycerol-3-phosphate de 79.4 2 6.9E-05 45.6 5.6 22 331-352 35-56 (391)
191 3mog_A Probable 3-hydroxybutyr 79.3 11 0.00037 40.7 11.4 33 330-374 5-37 (483)
192 2pgd_A 6-phosphogluconate dehy 79.3 3.5 0.00012 44.2 7.5 98 331-448 3-104 (482)
193 4egb_A DTDP-glucose 4,6-dehydr 79.2 5.2 0.00018 39.3 8.2 106 328-445 22-149 (346)
194 4gwg_A 6-phosphogluconate dehy 79.1 3.7 0.00013 44.6 7.7 98 331-448 5-106 (484)
195 3c24_A Putative oxidoreductase 79.1 3.2 0.00011 40.7 6.6 91 331-448 12-104 (286)
196 2qrj_A Saccharopine dehydrogen 79.1 4.8 0.00016 42.9 8.3 71 330-432 214-289 (394)
197 3pef_A 6-phosphogluconate dehy 79.0 2.1 7.2E-05 42.0 5.2 32 331-374 2-33 (287)
198 4aj2_A L-lactate dehydrogenase 79.0 0.99 3.4E-05 46.7 3.0 108 327-448 16-139 (331)
199 2g76_A 3-PGDH, D-3-phosphoglyc 79.0 10 0.00035 39.0 10.6 120 297-446 111-256 (335)
200 3c85_A Putative glutathione-re 78.6 1.2 4.2E-05 40.5 3.2 37 327-374 36-72 (183)
201 2izz_A Pyrroline-5-carboxylate 78.5 3.6 0.00012 41.4 6.9 100 330-449 22-122 (322)
202 3l6d_A Putative oxidoreductase 78.2 2.4 8.3E-05 42.4 5.5 36 327-374 6-41 (306)
203 3pdu_A 3-hydroxyisobutyrate de 77.9 2.7 9.3E-05 41.2 5.6 32 331-374 2-33 (287)
204 1yb4_A Tartronic semialdehyde 77.6 3.3 0.00011 40.3 6.1 21 331-351 4-24 (295)
205 1mx3_A CTBP1, C-terminal bindi 77.4 12 0.00039 38.8 10.4 209 277-526 88-333 (347)
206 1lss_A TRK system potassium up 77.3 2.2 7.4E-05 36.2 4.2 33 330-374 4-36 (140)
207 3ldh_A Lactate dehydrogenase; 77.2 1.1 3.7E-05 46.5 2.7 117 329-462 20-152 (330)
208 3doj_A AT3G25530, dehydrogenas 77.0 3.2 0.00011 41.5 5.9 36 327-374 18-53 (310)
209 4e5n_A Thermostable phosphite 77.0 8.5 0.00029 39.5 9.2 195 297-527 89-317 (330)
210 3i6i_A Putative leucoanthocyan 76.8 1.2 4.1E-05 44.4 2.7 101 327-442 7-117 (346)
211 3cky_A 2-hydroxymethyl glutara 76.7 2.1 7E-05 41.9 4.4 32 331-374 5-36 (301)
212 1tt5_B Ubiquitin-activating en 76.5 1.6 5.6E-05 46.7 3.9 37 327-374 37-73 (434)
213 3ggo_A Prephenate dehydrogenas 76.4 6.4 0.00022 39.8 8.0 93 331-445 34-128 (314)
214 3fwz_A Inner membrane protein 75.8 1.3 4.4E-05 39.0 2.4 32 331-374 8-39 (140)
215 3qha_A Putative oxidoreductase 75.7 3.7 0.00013 40.8 5.9 32 331-374 16-47 (296)
216 5mdh_A Malate dehydrogenase; o 75.7 1.1 3.7E-05 46.3 2.2 109 331-448 4-132 (333)
217 3qsg_A NAD-binding phosphogluc 75.2 12 0.00039 37.6 9.5 33 331-374 25-57 (312)
218 3r6d_A NAD-dependent epimerase 75.1 1.8 6.2E-05 40.1 3.4 94 331-443 6-106 (221)
219 3o38_A Short chain dehydrogena 75.1 3 0.0001 39.9 5.0 36 327-374 19-56 (266)
220 2z2v_A Hypothetical protein PH 74.7 1.6 5.3E-05 45.4 3.1 120 329-477 15-137 (365)
221 4ezb_A Uncharacterized conserv 74.6 3.5 0.00012 41.6 5.6 33 331-374 25-57 (317)
222 2ph5_A Homospermidine synthase 74.5 7.7 0.00026 42.4 8.5 98 330-446 13-115 (480)
223 2pzm_A Putative nucleotide sug 73.9 6.2 0.00021 38.9 7.1 103 326-445 16-136 (330)
224 3kb6_A D-lactate dehydrogenase 73.8 24 0.00083 36.2 11.7 111 325-469 136-252 (334)
225 3pdi_B Nitrogenase MOFE cofact 73.5 1.9 6.6E-05 46.3 3.5 182 158-419 177-384 (458)
226 3dhn_A NAD-dependent epimerase 73.3 4.2 0.00014 37.5 5.3 96 331-444 5-111 (227)
227 1vpd_A Tartronate semialdehyde 73.2 2.4 8.2E-05 41.4 3.8 32 331-374 6-37 (299)
228 1y8q_B Anthracycline-, ubiquit 73.2 2.4 8.2E-05 47.8 4.3 37 327-374 14-50 (640)
229 4hb9_A Similarities with proba 73.1 3 0.0001 41.5 4.6 32 331-374 2-33 (412)
230 3ip1_A Alcohol dehydrogenase, 72.8 14 0.00047 38.1 9.6 45 318-373 201-246 (404)
231 2g5c_A Prephenate dehydrogenas 72.5 8 0.00027 37.5 7.3 97 331-448 2-99 (281)
232 3d1c_A Flavin-containing putat 72.3 3.2 0.00011 40.9 4.6 35 330-375 4-38 (369)
233 2bka_A CC3, TAT-interacting pr 72.2 10 0.00035 35.2 7.8 102 328-445 16-132 (242)
234 2q1w_A Putative nucleotide sug 71.8 11 0.00037 37.1 8.3 104 327-445 18-137 (333)
235 3s2u_A UDP-N-acetylglucosamine 71.5 4.7 0.00016 41.0 5.7 41 402-446 84-124 (365)
236 4id9_A Short-chain dehydrogena 71.5 8.7 0.0003 37.7 7.5 97 326-445 15-126 (347)
237 2z1m_A GDP-D-mannose dehydrata 71.4 7.1 0.00024 38.0 6.7 101 329-445 2-127 (345)
238 1bg6_A N-(1-D-carboxylethyl)-L 71.3 9.7 0.00033 37.9 7.8 93 331-446 5-110 (359)
239 3vtz_A Glucose 1-dehydrogenase 71.1 8.5 0.00029 37.3 7.2 79 325-421 9-92 (269)
240 4a9w_A Monooxygenase; baeyer-v 69.8 3.5 0.00012 40.0 4.1 34 330-375 3-36 (357)
241 3m2p_A UDP-N-acetylglucosamine 69.7 12 0.0004 36.3 7.9 93 331-445 3-109 (311)
242 3hhp_A Malate dehydrogenase; M 69.4 4.6 0.00016 41.3 5.1 103 332-448 2-121 (312)
243 3fbs_A Oxidoreductase; structu 68.6 4.4 0.00015 38.4 4.4 32 331-374 3-34 (297)
244 3slg_A PBGP3 protein; structur 68.5 19 0.00066 35.7 9.3 101 327-445 21-141 (372)
245 3klj_A NAD(FAD)-dependent dehy 67.7 5.2 0.00018 41.2 5.1 37 329-377 8-44 (385)
246 1i36_A Conserved hypothetical 67.7 8.8 0.0003 36.7 6.4 20 332-351 2-21 (264)
247 2pv7_A T-protein [includes: ch 67.5 13 0.00046 36.8 7.9 32 331-374 22-54 (298)
248 2cvz_A Dehydrogenase, 3-hydrox 67.4 4.4 0.00015 39.2 4.2 30 332-374 3-32 (289)
249 3fg2_P Putative rubredoxin red 67.3 4.8 0.00016 41.2 4.7 37 331-377 2-38 (404)
250 2x5o_A UDP-N-acetylmuramoylala 67.2 13 0.00045 39.0 8.1 111 327-472 2-112 (439)
251 3f8d_A Thioredoxin reductase ( 67.0 5 0.00017 38.4 4.5 33 330-374 15-47 (323)
252 3hyw_A Sulfide-quinone reducta 66.9 3.9 0.00013 42.5 4.0 34 331-374 3-36 (430)
253 4b4u_A Bifunctional protein fo 66.9 16 0.00054 37.7 8.3 84 309-430 158-242 (303)
254 4b8w_A GDP-L-fucose synthase; 66.8 7.9 0.00027 36.8 5.8 93 327-445 3-113 (319)
255 3ef6_A Toluene 1,2-dioxygenase 66.7 8.8 0.0003 39.5 6.6 38 331-378 3-40 (410)
256 3oz2_A Digeranylgeranylglycero 66.6 4.8 0.00016 39.5 4.4 31 332-374 6-36 (397)
257 3ic5_A Putative saccharopine d 66.5 5.8 0.0002 32.4 4.3 85 329-435 4-92 (118)
258 3alj_A 2-methyl-3-hydroxypyrid 66.5 5.2 0.00018 40.2 4.7 38 327-376 8-45 (379)
259 1n2s_A DTDP-4-, DTDP-glucose o 66.4 5.9 0.0002 38.0 4.9 86 332-445 2-104 (299)
260 2zbw_A Thioredoxin reductase; 66.4 5.1 0.00017 39.0 4.5 34 330-375 5-38 (335)
261 3lzw_A Ferredoxin--NADP reduct 66.3 5.3 0.00018 38.5 4.5 33 330-374 7-39 (332)
262 3e48_A Putative nucleoside-dip 66.1 8.7 0.0003 36.8 6.0 97 332-445 2-106 (289)
263 2ahr_A Putative pyrroline carb 65.9 4.1 0.00014 39.0 3.7 90 331-448 4-93 (259)
264 3nrc_A Enoyl-[acyl-carrier-pro 65.9 8.5 0.00029 37.3 6.0 79 327-422 23-115 (280)
265 3ehe_A UDP-glucose 4-epimerase 65.9 19 0.00066 34.8 8.5 95 332-445 3-114 (313)
266 3llv_A Exopolyphosphatase-rela 65.7 6 0.0002 34.2 4.4 34 329-374 5-38 (141)
267 1uzm_A 3-oxoacyl-[acyl-carrier 65.6 14 0.00049 35.0 7.4 78 325-421 10-92 (247)
268 3lxd_A FAD-dependent pyridine 65.3 5.4 0.00019 40.9 4.6 39 329-377 8-46 (415)
269 1ygy_A PGDH, D-3-phosphoglycer 65.1 23 0.00078 38.5 9.7 120 297-445 88-232 (529)
270 2ywl_A Thioredoxin reductase r 65.0 6.2 0.00021 35.2 4.5 32 331-374 2-33 (180)
271 2jae_A L-amino acid oxidase; o 64.7 5.4 0.00018 41.5 4.6 42 323-376 4-45 (489)
272 2yjz_A Metalloreductase steap4 68.4 1.4 4.7E-05 41.9 0.0 92 328-448 17-108 (201)
273 2q7v_A Thioredoxin reductase; 64.5 5.3 0.00018 38.9 4.2 33 330-374 8-40 (325)
274 3dme_A Conserved exported prot 64.2 6.3 0.00022 38.4 4.7 33 330-374 4-36 (369)
275 1tt5_A APPBP1, amyloid protein 64.0 3.7 0.00013 45.0 3.3 38 326-374 28-65 (531)
276 1e6u_A GDP-fucose synthetase; 63.9 7.9 0.00027 37.5 5.3 87 330-445 3-107 (321)
277 3nix_A Flavoprotein/dehydrogen 63.9 8.2 0.00028 39.0 5.6 35 330-376 5-39 (421)
278 3h8l_A NADH oxidase; membrane 63.8 5.6 0.00019 40.6 4.4 36 331-375 2-37 (409)
279 3itj_A Thioredoxin reductase 1 63.6 4.9 0.00017 38.8 3.7 33 330-374 22-54 (338)
280 1ryi_A Glycine oxidase; flavop 63.5 6.4 0.00022 39.1 4.7 35 330-376 17-51 (382)
281 3enk_A UDP-glucose 4-epimerase 63.3 18 0.00062 35.3 7.8 97 330-445 5-129 (341)
282 3cgv_A Geranylgeranyl reductas 62.7 5.7 0.00019 39.5 4.1 34 330-375 4-37 (397)
283 2x3n_A Probable FAD-dependent 62.7 6.3 0.00022 39.7 4.5 34 330-375 6-39 (399)
284 1y56_B Sarcosine oxidase; dehy 62.6 6.5 0.00022 39.1 4.5 34 330-375 5-38 (382)
285 3axb_A Putative oxidoreductase 62.5 7.3 0.00025 40.0 5.0 38 325-373 18-55 (448)
286 2vou_A 2,6-dihydroxypyridine h 62.2 7.7 0.00026 39.3 5.1 34 329-374 4-37 (397)
287 2c20_A UDP-glucose 4-epimerase 62.2 14 0.00047 35.9 6.7 99 331-445 2-118 (330)
288 3cty_A Thioredoxin reductase; 62.1 6.7 0.00023 38.1 4.4 33 330-374 16-48 (319)
289 3c96_A Flavin-containing monoo 62.0 7.3 0.00025 39.7 4.8 35 330-375 4-38 (410)
290 2gf3_A MSOX, monomeric sarcosi 61.9 6.9 0.00024 38.9 4.5 35 331-377 4-38 (389)
291 2xdo_A TETX2 protein; tetracyc 61.8 6.6 0.00022 39.9 4.5 36 328-375 24-59 (398)
292 3rp8_A Flavoprotein monooxygen 61.8 7.1 0.00024 39.6 4.7 36 328-375 21-56 (407)
293 1pqw_A Polyketide synthase; ro 61.7 18 0.0006 32.9 7.0 50 313-374 22-72 (198)
294 4a7p_A UDP-glucose dehydrogena 61.6 23 0.00077 38.0 8.7 33 330-374 8-40 (446)
295 2x4g_A Nucleoside-diphosphate- 61.5 17 0.00057 35.5 7.2 96 332-445 15-126 (342)
296 1id1_A Putative potassium chan 61.4 8.6 0.00029 33.9 4.6 34 329-374 2-35 (153)
297 2q0l_A TRXR, thioredoxin reduc 61.4 7.4 0.00025 37.5 4.5 33 331-374 2-34 (311)
298 3ek2_A Enoyl-(acyl-carrier-pro 61.3 7.3 0.00025 36.9 4.4 38 325-374 9-49 (271)
299 3r9u_A Thioredoxin reductase; 61.2 7.4 0.00025 37.1 4.5 33 330-374 4-37 (315)
300 1yvv_A Amine oxidase, flavin-c 61.2 7 0.00024 38.0 4.4 33 331-375 3-35 (336)
301 3ab1_A Ferredoxin--NADP reduct 61.1 7.6 0.00026 38.5 4.7 35 329-375 13-47 (360)
302 3l4b_C TRKA K+ channel protien 61.0 5.2 0.00018 37.5 3.3 92 332-446 2-100 (218)
303 3ew7_A LMO0794 protein; Q8Y8U8 61.0 25 0.00084 31.8 7.8 91 332-445 2-103 (221)
304 2gag_B Heterotetrameric sarcos 60.9 8.6 0.00029 38.4 5.1 36 330-375 21-56 (405)
305 3k7m_X 6-hydroxy-L-nicotine ox 60.7 7.7 0.00026 39.4 4.7 32 332-375 3-34 (431)
306 2dq4_A L-threonine 3-dehydroge 60.6 8.9 0.0003 38.4 5.1 87 313-419 149-240 (343)
307 2nvu_B Maltose binding protein 60.4 4.5 0.00015 45.9 3.2 35 329-374 410-444 (805)
308 2c5a_A GDP-mannose-3', 5'-epim 60.2 28 0.00097 35.0 8.8 99 329-445 28-145 (379)
309 2vdc_G Glutamate synthase [NAD 60.1 8.6 0.00029 40.8 5.1 34 329-374 121-154 (456)
310 2yy7_A L-threonine dehydrogena 60.1 8.9 0.0003 36.9 4.9 99 331-445 3-118 (312)
311 2dkn_A 3-alpha-hydroxysteroid 60.0 10 0.00034 35.3 5.1 69 332-422 3-74 (255)
312 3qvo_A NMRA family protein; st 59.9 10 0.00036 35.5 5.2 101 328-445 21-125 (236)
313 1trb_A Thioredoxin reductase; 59.6 5.4 0.00018 38.5 3.2 34 329-374 4-37 (320)
314 4eqs_A Coenzyme A disulfide re 59.6 7.7 0.00026 40.6 4.6 34 332-375 2-35 (437)
315 4hv4_A UDP-N-acetylmuramate--L 59.4 10 0.00036 40.6 5.7 107 330-472 22-130 (494)
316 3dje_A Fructosyl amine: oxygen 59.3 8.2 0.00028 39.4 4.7 37 330-377 6-42 (438)
317 3cmm_A Ubiquitin-activating en 59.2 8.1 0.00028 45.8 5.1 37 327-374 24-60 (1015)
318 2uzz_A N-methyl-L-tryptophan o 59.1 7.5 0.00026 38.4 4.2 35 331-377 3-37 (372)
319 1zk7_A HGII, reductase, mercur 59.0 8.3 0.00029 40.2 4.8 33 330-374 4-36 (467)
320 1k0i_A P-hydroxybenzoate hydro 58.7 9.5 0.00033 38.3 5.0 33 331-375 3-35 (394)
321 2d8a_A PH0655, probable L-thre 58.5 8.3 0.00029 38.7 4.5 49 313-374 153-201 (348)
322 1c0p_A D-amino acid oxidase; a 58.5 9.7 0.00033 37.8 4.9 34 330-375 6-39 (363)
323 3dfz_A SIRC, precorrin-2 dehyd 58.5 7.7 0.00026 38.0 4.1 36 327-374 28-63 (223)
324 2gqw_A Ferredoxin reductase; f 58.3 13 0.00043 38.3 5.9 39 330-378 7-45 (408)
325 2oln_A NIKD protein; flavoprot 58.2 8.7 0.0003 38.6 4.6 36 330-377 4-39 (397)
326 3i1j_A Oxidoreductase, short c 58.2 20 0.00067 33.6 6.8 38 326-374 10-47 (247)
327 2o7s_A DHQ-SDH PR, bifunctiona 58.1 12 0.0004 40.6 5.8 36 327-374 361-396 (523)
328 3dqp_A Oxidoreductase YLBE; al 58.0 17 0.0006 33.3 6.3 94 332-445 2-106 (219)
329 3gg2_A Sugar dehydrogenase, UD 57.9 8.1 0.00028 41.2 4.5 32 331-374 3-34 (450)
330 3i3l_A Alkylhalidase CMLS; fla 57.8 13 0.00043 41.0 6.1 38 328-377 21-58 (591)
331 2q1s_A Putative nucleotide sug 57.7 16 0.00054 36.8 6.4 103 327-445 29-151 (377)
332 3tzq_B Short-chain type dehydr 57.4 9.5 0.00033 36.9 4.6 78 326-421 7-96 (271)
333 3un1_A Probable oxidoreductase 57.2 26 0.0009 33.6 7.7 76 328-421 26-107 (260)
334 2gv8_A Monooxygenase; FMO, FAD 57.0 8.9 0.0003 39.8 4.5 36 329-374 5-40 (447)
335 2dtx_A Glucose 1-dehydrogenase 56.8 42 0.0014 32.2 9.0 76 327-421 5-85 (264)
336 2p5y_A UDP-glucose 4-epimerase 56.8 16 0.00055 35.3 6.1 98 332-445 2-117 (311)
337 1o5i_A 3-oxoacyl-(acyl carrier 56.7 34 0.0012 32.5 8.3 77 326-421 15-92 (249)
338 3p19_A BFPVVD8, putative blue 56.7 11 0.00037 36.6 4.8 82 325-421 11-98 (266)
339 1hdc_A 3-alpha, 20 beta-hydrox 56.7 11 0.00038 35.9 4.9 37 327-374 2-38 (254)
340 4ej6_A Putative zinc-binding d 56.5 22 0.00077 36.1 7.4 104 305-433 159-275 (370)
341 3sx6_A Sulfide-quinone reducta 56.5 9.9 0.00034 39.4 4.8 36 331-375 5-40 (437)
342 3urh_A Dihydrolipoyl dehydroge 56.4 9.3 0.00032 40.2 4.6 34 330-375 25-58 (491)
343 3uox_A Otemo; baeyer-villiger 56.4 11 0.00037 41.0 5.2 35 329-375 8-42 (545)
344 1vdc_A NTR, NADPH dependent th 56.3 7.9 0.00027 37.6 3.8 33 329-373 7-39 (333)
345 1hxh_A 3BETA/17BETA-hydroxyste 56.3 6.7 0.00023 37.4 3.2 37 327-374 3-39 (253)
346 2r9z_A Glutathione amide reduc 56.2 9.5 0.00033 40.0 4.6 33 330-374 4-36 (463)
347 2eq6_A Pyruvate dehydrogenase 56.2 8.6 0.00029 40.3 4.3 35 329-375 5-39 (464)
348 1dxl_A Dihydrolipoamide dehydr 56.1 11 0.00038 39.2 5.1 33 330-374 6-38 (470)
349 3s5w_A L-ornithine 5-monooxyge 56.1 7.9 0.00027 40.0 3.9 40 330-376 30-69 (463)
350 2xve_A Flavin-containing monoo 56.0 9.6 0.00033 40.2 4.6 38 331-374 3-40 (464)
351 3sc6_A DTDP-4-dehydrorhamnose 55.9 7 0.00024 37.3 3.3 83 332-445 7-106 (287)
352 3tpc_A Short chain alcohol deh 55.7 27 0.00092 33.2 7.4 77 327-421 4-92 (257)
353 3pid_A UDP-glucose 6-dehydroge 55.6 24 0.00082 37.8 7.7 44 411-460 146-189 (432)
354 2cul_A Glucose-inhibited divis 55.6 11 0.00036 35.7 4.5 33 330-374 3-35 (232)
355 2zcu_A Uncharacterized oxidore 55.5 9 0.00031 36.3 4.0 98 332-445 1-104 (286)
356 3ec7_A Putative dehydrogenase; 55.5 5.7 0.00019 40.5 2.7 96 328-442 21-116 (357)
357 4ap3_A Steroid monooxygenase; 55.0 9.7 0.00033 41.4 4.6 35 329-375 20-54 (549)
358 1vl0_A DTDP-4-dehydrorhamnose 55.0 11 0.00037 36.1 4.5 87 328-445 10-113 (292)
359 3ka7_A Oxidoreductase; structu 55.0 11 0.00038 38.1 4.7 32 332-375 2-33 (425)
360 3nrn_A Uncharacterized protein 54.9 11 0.00039 38.3 4.8 33 332-376 2-34 (421)
361 2hqm_A GR, grase, glutathione 54.9 9.5 0.00033 40.1 4.4 35 329-375 10-44 (479)
362 3v76_A Flavoprotein; structura 54.8 9.7 0.00033 39.9 4.4 35 330-376 27-61 (417)
363 2qcu_A Aerobic glycerol-3-phos 54.8 10 0.00035 40.2 4.7 34 330-375 3-36 (501)
364 2wm3_A NMRA-like family domain 54.5 5.3 0.00018 38.6 2.2 99 330-446 5-115 (299)
365 3sxp_A ADP-L-glycero-D-mannohe 54.5 22 0.00074 35.4 6.7 108 326-445 6-138 (362)
366 3e03_A Short chain dehydrogena 54.1 37 0.0013 32.7 8.2 38 326-374 2-39 (274)
367 1sb8_A WBPP; epimerase, 4-epim 54.1 12 0.00041 37.0 4.7 101 328-445 25-153 (352)
368 1rsg_A FMS1 protein; FAD bindi 53.9 3.9 0.00013 43.4 1.2 25 328-352 6-30 (516)
369 3h28_A Sulfide-quinone reducta 53.8 11 0.00038 38.8 4.6 35 331-375 3-37 (430)
370 2qae_A Lipoamide, dihydrolipoy 53.7 11 0.00038 39.3 4.6 34 330-375 2-35 (468)
371 1mo9_A ORF3; nucleotide bindin 53.6 11 0.00036 40.4 4.5 35 329-375 42-76 (523)
372 2d1y_A Hypothetical protein TT 53.6 19 0.00066 34.2 6.0 79 327-421 3-88 (256)
373 3uko_A Alcohol dehydrogenase c 53.4 24 0.00083 35.8 7.0 45 318-373 182-226 (378)
374 2q2v_A Beta-D-hydroxybutyrate 53.4 10 0.00034 36.1 3.9 37 327-374 1-37 (255)
375 3gaf_A 7-alpha-hydroxysteroid 53.3 21 0.00071 34.2 6.2 38 326-374 8-45 (256)
376 2wpf_A Trypanothione reductase 53.2 14 0.00048 39.2 5.4 32 330-372 7-38 (495)
377 4g6h_A Rotenone-insensitive NA 53.2 5.8 0.0002 42.6 2.4 32 331-374 43-74 (502)
378 1zk4_A R-specific alcohol dehy 53.2 8.2 0.00028 36.1 3.2 38 326-374 2-39 (251)
379 3ruf_A WBGU; rossmann fold, UD 53.1 8.6 0.0003 37.8 3.5 101 328-445 23-151 (351)
380 3r1i_A Short-chain type dehydr 53.0 31 0.0011 33.5 7.5 78 326-421 28-120 (276)
381 3ktd_A Prephenate dehydrogenas 52.9 14 0.00048 38.1 5.2 91 331-445 9-101 (341)
382 1fl2_A Alkyl hydroperoxide red 52.8 11 0.00037 36.2 4.1 32 331-374 2-33 (310)
383 4gcm_A TRXR, thioredoxin reduc 52.7 12 0.0004 36.3 4.3 32 331-374 7-38 (312)
384 2yqu_A 2-oxoglutarate dehydrog 52.7 12 0.00039 39.0 4.5 33 331-375 2-34 (455)
385 1dlj_A UDP-glucose dehydrogena 52.5 11 0.00039 39.2 4.5 30 332-374 2-31 (402)
386 3grf_A Ornithine carbamoyltran 52.4 42 0.0014 34.7 8.7 131 268-416 96-240 (328)
387 3k31_A Enoyl-(acyl-carrier-pro 52.3 16 0.00056 35.8 5.4 81 325-421 25-119 (296)
388 1rkx_A CDP-glucose-4,6-dehydra 52.3 23 0.00077 35.0 6.4 102 328-445 7-132 (357)
389 1w4x_A Phenylacetone monooxyge 52.2 13 0.00045 39.9 5.0 36 328-375 14-49 (542)
390 1xq6_A Unknown protein; struct 52.1 15 0.00051 33.8 4.8 101 328-445 2-133 (253)
391 2nu8_A Succinyl-COA ligase [AD 52.0 25 0.00085 35.2 6.7 86 330-441 7-93 (288)
392 2ydy_A Methionine adenosyltran 52.0 26 0.00089 33.8 6.7 92 330-445 2-110 (315)
393 3k30_A Histamine dehydrogenase 52.0 14 0.00048 41.0 5.3 34 330-375 391-424 (690)
394 1xg5_A ARPG836; short chain de 51.9 27 0.00094 33.5 6.8 37 327-374 29-65 (279)
395 3m6i_A L-arabinitol 4-dehydrog 51.9 14 0.00049 37.1 5.0 56 307-374 158-213 (363)
396 2aqj_A Tryptophan halogenase, 51.9 12 0.0004 40.0 4.5 38 330-376 5-42 (538)
397 1zmd_A Dihydrolipoyl dehydroge 51.8 12 0.0004 39.2 4.5 34 330-375 6-39 (474)
398 1ek6_A UDP-galactose 4-epimera 51.8 15 0.00053 35.9 5.1 101 331-445 3-132 (348)
399 2a8x_A Dihydrolipoyl dehydroge 51.7 11 0.00039 39.1 4.4 33 330-374 3-35 (464)
400 3n74_A 3-ketoacyl-(acyl-carrie 51.7 11 0.00036 35.8 3.8 78 326-421 5-94 (261)
401 1ges_A Glutathione reductase; 51.7 10 0.00034 39.6 3.9 33 330-374 4-36 (450)
402 2e4g_A Tryptophan halogenase; 51.6 12 0.00042 40.2 4.7 38 330-376 25-62 (550)
403 1q1r_A Putidaredoxin reductase 51.6 14 0.00047 38.4 4.9 37 330-376 4-40 (431)
404 1yqd_A Sinapyl alcohol dehydro 51.5 29 0.00098 35.2 7.2 49 313-373 171-219 (366)
405 1ebd_A E3BD, dihydrolipoamide 51.5 11 0.00038 39.1 4.2 32 331-374 4-35 (455)
406 3ntd_A FAD-dependent pyridine 51.5 15 0.00052 39.0 5.3 37 331-377 2-38 (565)
407 4gde_A UDP-galactopyranose mut 51.4 14 0.00048 38.2 5.0 23 330-352 10-32 (513)
408 2weu_A Tryptophan 5-halogenase 51.4 9.2 0.00031 40.2 3.6 37 331-376 3-39 (511)
409 4ep1_A Otcase, ornithine carba 51.2 72 0.0025 33.2 10.2 131 268-420 121-257 (340)
410 1m6i_A Programmed cell death p 51.1 15 0.0005 39.1 5.1 38 329-376 10-47 (493)
411 2fwm_X 2,3-dihydro-2,3-dihydro 51.0 48 0.0017 31.3 8.3 77 327-421 4-85 (250)
412 3cgb_A Pyridine nucleotide-dis 51.0 11 0.00036 39.8 4.0 63 305-377 8-73 (480)
413 2a87_A TRXR, TR, thioredoxin r 50.9 10 0.00035 37.2 3.6 34 329-374 13-46 (335)
414 2v3a_A Rubredoxin reductase; a 50.9 12 0.00041 37.9 4.2 35 330-374 4-38 (384)
415 3ko8_A NAD-dependent epimerase 50.7 45 0.0015 32.0 8.1 94 332-445 2-113 (312)
416 2qa2_A CABE, polyketide oxygen 50.7 13 0.00044 39.6 4.7 34 329-374 11-44 (499)
417 4a2c_A Galactitol-1-phosphate 50.7 34 0.0012 33.9 7.5 55 307-373 139-193 (346)
418 1onf_A GR, grase, glutathione 50.4 12 0.00042 39.6 4.4 33 331-375 3-35 (500)
419 1lvl_A Dihydrolipoamide dehydr 50.4 13 0.00044 38.9 4.5 33 330-374 5-37 (458)
420 4b63_A L-ornithine N5 monooxyg 50.4 9.1 0.00031 40.9 3.4 23 331-353 40-62 (501)
421 3h7a_A Short chain dehydrogena 50.2 29 0.001 33.1 6.7 77 327-421 4-94 (252)
422 3o0h_A Glutathione reductase; 50.2 14 0.00049 38.8 4.8 33 330-374 26-58 (484)
423 4eez_A Alcohol dehydrogenase 1 50.1 36 0.0012 33.8 7.5 47 315-373 150-196 (348)
424 2ehd_A Oxidoreductase, oxidore 50.0 23 0.00078 32.8 5.7 34 330-374 5-38 (234)
425 1nff_A Putative oxidoreductase 50.0 19 0.00067 34.4 5.4 38 326-374 3-40 (260)
426 2nm0_A Probable 3-oxacyl-(acyl 50.0 35 0.0012 32.7 7.2 77 326-421 17-98 (253)
427 3ihm_A Styrene monooxygenase A 50.0 12 0.0004 38.8 4.1 32 331-374 23-54 (430)
428 3l8k_A Dihydrolipoyl dehydroge 49.8 14 0.00049 38.5 4.8 35 330-376 4-38 (466)
429 4gqa_A NAD binding oxidoreduct 49.8 10 0.00035 39.1 3.5 104 318-433 13-118 (412)
430 3lad_A Dihydrolipoamide dehydr 49.7 15 0.00053 38.2 5.0 33 330-374 3-35 (476)
431 2bry_A NEDD9 interacting prote 49.6 14 0.00048 39.4 4.7 37 329-377 91-127 (497)
432 2bc0_A NADH oxidase; flavoprot 49.6 15 0.00053 38.6 5.0 37 330-375 35-71 (490)
433 3gwf_A Cyclohexanone monooxyge 49.5 11 0.00037 40.9 3.8 36 329-375 7-42 (540)
434 2qa1_A PGAE, polyketide oxygen 49.4 13 0.00045 39.6 4.5 25 327-351 8-32 (500)
435 1yb1_A 17-beta-hydroxysteroid 49.4 34 0.0011 32.8 7.0 38 326-374 27-64 (272)
436 3f1l_A Uncharacterized oxidore 49.4 27 0.00092 33.2 6.2 38 326-374 8-45 (252)
437 2zb4_A Prostaglandin reductase 49.2 25 0.00086 35.2 6.3 56 308-374 137-195 (357)
438 3euw_A MYO-inositol dehydrogen 49.2 8.3 0.00028 38.7 2.7 90 331-442 5-94 (344)
439 1kyq_A Met8P, siroheme biosynt 49.1 9.7 0.00033 38.4 3.2 36 327-374 10-45 (274)
440 4imr_A 3-oxoacyl-(acyl-carrier 49.1 57 0.002 31.6 8.7 76 327-420 30-119 (275)
441 4hkt_A Inositol 2-dehydrogenas 48.9 10 0.00036 37.7 3.4 89 331-442 4-92 (331)
442 4gbj_A 6-phosphogluconate dehy 48.9 28 0.00097 34.7 6.5 31 331-373 6-36 (297)
443 3oig_A Enoyl-[acyl-carrier-pro 48.8 25 0.00086 33.4 5.9 80 326-421 3-98 (266)
444 1pl8_A Human sorbitol dehydrog 48.7 19 0.00064 36.3 5.2 49 313-373 156-204 (356)
445 7mdh_A Protein (malate dehydro 48.7 13 0.00045 39.2 4.2 105 330-448 32-161 (375)
446 4dry_A 3-oxoacyl-[acyl-carrier 48.5 18 0.00063 35.2 5.0 79 325-421 28-122 (281)
447 3st7_A Capsular polysaccharide 48.5 38 0.0013 33.7 7.5 79 332-445 2-94 (369)
448 3qj4_A Renalase; FAD/NAD(P)-bi 48.5 10 0.00035 37.4 3.2 35 331-374 2-36 (342)
449 1rpn_A GDP-mannose 4,6-dehydra 48.4 31 0.0011 33.5 6.6 104 328-445 12-138 (335)
450 4a5l_A Thioredoxin reductase; 48.4 13 0.00043 35.8 3.8 32 331-374 5-36 (314)
451 1v59_A Dihydrolipoamide dehydr 48.2 16 0.00054 38.2 4.8 34 330-375 5-38 (478)
452 2fzw_A Alcohol dehydrogenase c 48.2 35 0.0012 34.4 7.2 45 318-373 179-223 (373)
453 3ihg_A RDME; flavoenzyme, anth 48.2 13 0.00045 39.4 4.2 34 330-375 5-38 (535)
454 3rwb_A TPLDH, pyridoxal 4-dehy 48.0 16 0.00055 34.8 4.4 38 326-374 2-39 (247)
455 1p0f_A NADP-dependent alcohol 48.0 36 0.0012 34.4 7.2 44 319-373 181-224 (373)
456 3uog_A Alcohol dehydrogenase; 48.0 15 0.00051 37.2 4.4 44 318-373 178-221 (363)
457 1fjh_A 3alpha-hydroxysteroid d 47.8 28 0.00095 32.7 6.0 70 331-421 2-73 (257)
458 1iy8_A Levodione reductase; ox 47.8 26 0.00088 33.5 5.8 38 326-374 9-46 (267)
459 3op4_A 3-oxoacyl-[acyl-carrier 47.7 11 0.00038 35.9 3.3 77 327-421 6-94 (248)
460 3ak4_A NADH-dependent quinucli 47.7 17 0.0006 34.5 4.6 37 327-374 9-45 (263)
461 2rgh_A Alpha-glycerophosphate 47.5 16 0.00055 39.8 4.8 34 330-375 32-65 (571)
462 2hcy_A Alcohol dehydrogenase 1 47.3 27 0.00092 34.9 6.1 44 317-373 158-202 (347)
463 3nyc_A D-arginine dehydrogenas 47.3 12 0.0004 36.9 3.4 34 329-375 8-41 (381)
464 3v8b_A Putative dehydrogenase, 47.1 27 0.00092 34.1 6.0 77 327-421 25-116 (283)
465 1xhc_A NADH oxidase /nitrite r 47.1 12 0.00039 38.2 3.4 35 330-377 8-42 (367)
466 3c4n_A Uncharacterized protein 47.1 18 0.00061 36.9 4.9 35 331-375 37-71 (405)
467 2pnf_A 3-oxoacyl-[acyl-carrier 47.0 26 0.00089 32.5 5.6 37 327-374 4-40 (248)
468 2gqf_A Hypothetical protein HI 47.0 13 0.00045 38.5 3.9 35 330-376 4-38 (401)
469 1kol_A Formaldehyde dehydrogen 47.0 33 0.0011 35.0 6.8 48 314-373 171-218 (398)
470 3e1t_A Halogenase; flavoprotei 46.9 12 0.00042 39.6 3.8 35 329-375 6-40 (512)
471 1t2a_A GDP-mannose 4,6 dehydra 46.9 34 0.0012 34.0 6.8 101 331-445 25-156 (375)
472 1ojt_A Surface protein; redox- 46.9 16 0.00056 38.3 4.6 34 330-375 6-39 (482)
473 1s3e_A Amine oxidase [flavin-c 46.9 17 0.00057 38.3 4.7 22 330-351 4-25 (520)
474 3rih_A Short chain dehydrogena 46.8 32 0.0011 33.9 6.5 38 326-374 37-74 (293)
475 3moi_A Probable dehydrogenase; 46.7 7.8 0.00027 39.8 2.1 89 331-441 3-92 (387)
476 3dk9_A Grase, GR, glutathione 46.7 15 0.0005 38.5 4.2 34 329-374 19-52 (478)
477 3rkr_A Short chain oxidoreduct 46.7 34 0.0012 32.6 6.6 36 327-374 26-62 (262)
478 2bi7_A UDP-galactopyranose mut 46.6 16 0.00056 37.4 4.5 34 330-375 3-36 (384)
479 1y1p_A ARII, aldehyde reductas 46.6 52 0.0018 31.7 7.9 101 327-445 8-132 (342)
480 3tox_A Short chain dehydrogena 46.5 24 0.00081 34.5 5.4 37 327-374 5-41 (280)
481 3fpz_A Thiazole biosynthetic e 46.5 18 0.00062 35.6 4.7 37 328-374 63-99 (326)
482 3oqb_A Oxidoreductase; structu 46.2 13 0.00044 37.9 3.6 96 328-442 4-112 (383)
483 2cdc_A Glucose dehydrogenase g 46.2 47 0.0016 33.5 7.8 33 330-374 181-213 (366)
484 2e1m_A L-glutamate oxidase; L- 46.1 18 0.00061 37.8 4.7 35 328-374 42-76 (376)
485 3tpf_A Otcase, ornithine carba 46.0 1.3E+02 0.0043 30.9 10.9 129 268-418 87-222 (307)
486 1f8f_A Benzyl alcohol dehydrog 45.9 40 0.0014 34.0 7.2 50 313-373 174-223 (371)
487 1qsg_A Enoyl-[acyl-carrier-pro 45.8 19 0.00067 34.3 4.6 35 328-374 7-44 (265)
488 1piw_A Hypothetical zinc-type 45.8 52 0.0018 33.1 8.0 46 315-373 166-211 (360)
489 1wly_A CAAR, 2-haloacrylate re 45.8 31 0.0011 34.2 6.3 50 313-374 129-179 (333)
490 3da1_A Glycerol-3-phosphate de 45.7 14 0.00048 40.1 4.0 33 330-374 18-50 (561)
491 1fmc_A 7 alpha-hydroxysteroid 45.7 19 0.00066 33.6 4.5 37 327-374 8-44 (255)
492 2zat_A Dehydrogenase/reductase 45.7 42 0.0014 31.8 7.0 39 325-374 9-47 (260)
493 2x6t_A ADP-L-glycero-D-manno-h 45.5 29 0.00099 34.3 6.0 102 328-445 44-163 (357)
494 1o94_A Tmadh, trimethylamine d 45.5 17 0.00059 40.7 4.8 35 329-375 388-422 (729)
495 3pxx_A Carveol dehydrogenase; 45.5 38 0.0013 32.3 6.7 38 327-375 7-44 (287)
496 3db2_A Putative NADPH-dependen 45.4 13 0.00044 37.5 3.4 91 330-442 5-95 (354)
497 3g3e_A D-amino-acid oxidase; F 45.3 20 0.00068 35.4 4.7 37 332-375 2-39 (351)
498 3g17_A Similar to 2-dehydropan 45.3 17 0.00059 35.8 4.3 98 331-453 3-104 (294)
499 2vvm_A Monoamine oxidase N; FA 45.2 18 0.00062 37.6 4.6 32 331-374 40-71 (495)
500 1fec_A Trypanothione reductase 45.1 22 0.00075 37.6 5.3 32 330-372 3-34 (490)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=3.1e-207 Score=1664.85 Aligned_cols=539 Identities=52% Similarity=0.928 Sum_probs=531.3
Q ss_pred ccccccccCcCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhh-cccccchhhhccc
Q 007782 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMEL-ERNERLFYKLLID 128 (590)
Q Consensus 50 ~~G~~ll~~p~~NKGtaFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L-~~Ne~LFy~ll~~ 128 (590)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|++|++++++|+||+||++| ++||+|||||+++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 379999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007782 129 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 208 (590)
Q Consensus 129 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 208 (590)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH
Q 007782 209 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 288 (590)
Q Consensus 209 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A 288 (590)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007782 289 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 368 (590)
Q Consensus 289 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i 368 (590)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 369 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 369 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007782 449 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 449 ~~aEctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~v~ 527 (590)
+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||||+++++|++|||+|+++||+|||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007782 528 EENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 590 (590)
Q Consensus 528 ~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~dl~~~i~~~m~~P~Y~~~~ 590 (590)
++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~P~Y~~~~ 541 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCFV 541 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHTTSCCCSCCCCS
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999988788899999999999999999874
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=2.5e-206 Score=1662.02 Aligned_cols=540 Identities=50% Similarity=0.908 Sum_probs=531.6
Q ss_pred ccccccccCcCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhh-cccccchhhhccc
Q 007782 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMEL-ERNERLFYKLLID 128 (590)
Q Consensus 50 ~~G~~ll~~p~~NKGtaFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L-~~Ne~LFy~ll~~ 128 (590)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+||++++++|+||+||++| ++||+|||||+++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 589999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCcccchhh
Q 007782 129 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 208 (590)
Q Consensus 129 ~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 208 (590)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+|+++|+|||.++|+|||||||||||||||||++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH
Q 007782 209 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 288 (590)
Q Consensus 209 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A 288 (590)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007782 289 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 368 (590)
Q Consensus 289 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i 368 (590)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 369 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 369 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcc
Q 007782 447 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQ 525 (590)
Q Consensus 447 Pt~~aEctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~ 525 (590)
||+++||+||||++||+|+|||||||||+||+| +||+|+||||||+|+|||||||+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007782 526 VTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 590 (590)
Q Consensus 526 v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~dl~~~i~~~m~~P~Y~~~~ 590 (590)
++++++..+.|||+++++|+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|.|++|+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa~~A~~~GvA~~~~~~~d~~~~i~~~~~~p~Y~~~~ 546 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVKERTWRSEYDSLL 546 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHHHHHHHTTCCCCSSCCSSHHHHHHHTCCCCSCCCCC
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHhhCCCCCCcc
Confidence 99999999999999999999999999999999999999988788899999999999999999874
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=1.7e-206 Score=1667.65 Aligned_cols=543 Identities=47% Similarity=0.848 Sum_probs=534.1
Q ss_pred ccccccccccccCcCCccCCCCCHHHHhhcccCCCCCCcccCHHHHHHHHHHHHhcCCCchhHHHHhhhh-cccccchhh
Q 007782 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMEL-ERNERLFYK 124 (590)
Q Consensus 46 ~~~~~~G~~ll~~p~~NKGtaFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~Ky~~L~~L-~~Ne~LFy~ 124 (590)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|++|++++++|+||+||++| ++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 4456799999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred hcccCccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceeecCCCCCCCc
Q 007782 125 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 202 (590)
Q Consensus 125 ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 202 (590)
|+++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+++++|+|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeec
Q 007782 203 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 282 (590)
Q Consensus 203 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfED 282 (590)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChh
Q 007782 283 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 362 (590)
Q Consensus 283 f~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~e 362 (590)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999974 99999
Q ss_pred hhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 363 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 363 eA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||||||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877778999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007782 443 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEAL 522 (590)
Q Consensus 443 aLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aL 522 (590)
||||||+++|||||||++||+|+|||||||||+||+|+||+++|||+||+|+|||||||+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCcccCCCCCC
Q 007782 523 AKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 590 (590)
Q Consensus 523 A~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~dl~~~i~~~m~~P~Y~~~~ 590 (590)
|++++++++..+.|||++++||+||.+||.||+++|+++|+|+..++|+|+.+|++++||+|+|++|+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa~~A~~~GvA~~~~~~~d~~~~i~~~~w~P~Y~~~~ 578 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQVYNTEYEELI 578 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHHHHHHHTTCBCSSSCCSCHHHHHHHHSCCCSCCCCS
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHhccCCCCCccc
Confidence 99999999999999999999999999999999999999999988788899999999999999999874
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=2.7e-122 Score=985.33 Aligned_cols=385 Identities=31% Similarity=0.414 Sum_probs=346.9
Q ss_pred hcccCccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCC-Ccc
Q 007782 125 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGM 203 (590)
Q Consensus 125 ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~Gm 203 (590)
+-+++-++ |||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +||
T Consensus 53 ~~~~~~~d-LslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agm 114 (487)
T 3nv9_A 53 CTLAGFNW-FNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGL 114 (487)
T ss_dssp SCCSSGGG-HHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGH
T ss_pred CCCCCHHH-CeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCC
Confidence 44556665 99999999999999986 4678888777666 48999999999999999999 599
Q ss_pred cchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecC
Q 007782 204 GIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDF 283 (590)
Q Consensus 204 gI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf 283 (590)
|||+||++|||+||||| |||||||+||+| +++|| |+|+ |||+++.++||. ||||||
T Consensus 115 pImeGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf 170 (487)
T 3nv9_A 115 GVMEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDI 170 (487)
T ss_dssp HHHHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSC
T ss_pred chhhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhc
Confidence 99999999999999999 999999999765 45664 3333 456666666655 999999
Q ss_pred CCchHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCCh
Q 007782 284 ANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPV 361 (590)
Q Consensus 284 ~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~ 361 (590)
+++|||+||+|||+ +||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+. .|+++
T Consensus 171 ~ap~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~ 245 (487)
T 3nv9_A 171 SQPNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP 245 (487)
T ss_dssp CTTHHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG
T ss_pred CCchHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc
Confidence 99999999999998 799999999999999999999999999999999999999999999999999975 49986
Q ss_pred hhhcCcEEEEcCCCcccCCCcCCCc-----hhchhhccccC--CCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHH
Q 007782 362 EETRKKICLVDSKGLIVSSRKDSLQ-----HFKKPWAHEHE--PVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMA 433 (590)
Q Consensus 362 eeA~~~i~lvD~~GLv~~~R~~~l~-----~~k~~fA~~~~--~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma 433 (590)
++|||||++|||+++|.+ |. ++|.+||++.. ...+|+|||+. +|||||+|++ +|+||+|+|++|+
T Consensus 246 ----~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma 318 (487)
T 3nv9_A 246 ----KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG 318 (487)
T ss_dssp ----GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC
T ss_pred ----ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc
Confidence 899999999999999954 63 46678888652 46799999998 7999999976 7999999999996
Q ss_pred cCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHH
Q 007782 434 SFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDD 513 (590)
Q Consensus 434 ~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~ 513 (590)
+||||||||||| +||+||||++ +|+||||||| +++|||+||+|+|||||||+++++|++|||+
T Consensus 319 ---~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~ 381 (487)
T 3nv9_A 319 ---EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDN 381 (487)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHH
T ss_pred ---CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHH
Confidence 899999999999 7999999998 5999999995 6789999999999999999999999999999
Q ss_pred HHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCC-CCchhHHHHHHhCC
Q 007782 514 MLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRL-PRPQNLVKCAESCM 581 (590)
Q Consensus 514 M~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~-~~~~dl~~~i~~~m 581 (590)
|+++||++||++++++++.++.|||++++ ++||.+||.||+++|+++|+|+.. ++++++.+++++.+
T Consensus 382 M~~AAA~ALA~~v~~~~l~~~~i~P~~~d-~~Vs~~VA~AVa~aA~~~GvA~~~~~~~~~~~~~~~~~~ 449 (487)
T 3nv9_A 382 MAIAASRALAEFAEKRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVARVTDLTWQQVYDIAEHDI 449 (487)
T ss_dssp HHHHHHHHHHHHHHHTCCBTTBCSCCTTC-TTHHHHHHHHHHHHHHHHTCCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcccCCCCceeCCccc-cchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 689999999999999999999976 57889999988765
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=5.4e-114 Score=911.30 Aligned_cols=361 Identities=29% Similarity=0.420 Sum_probs=335.3
Q ss_pred cchhhhcccCccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007782 120 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 199 (590)
Q Consensus 120 ~LFy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 199 (590)
.+++++.+++.|. |||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~i~---~~p----------~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTKHD-LSIAYTPGVASVSSAIA---KDK----------TLAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSHHH-HHHHSTTTTHHHHHHHH---HCG----------GGHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCHHH-CeEEECchHHHHHHHHH---hCH----------HHHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 5778888888764 89999999999999987 344 5554 7999999999999999999999999
Q ss_pred CC-cccchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 007782 200 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 277 (590)
Q Consensus 200 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 277 (590)
++ ||+||+||++||++||||| |+|||||+|| +||||++|+..| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999999 88 89
Q ss_pred eeeecCCCchHHHHHHHHcCC--CceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 278 IQFEDFANHNAFELLAKYGTT--HLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 278 IqfEDf~~~~Af~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
||||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 999999999999999999974 999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 432 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M 432 (590)
|. ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 74 899999999999999933599999999997543 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCH
Q 007782 433 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 512 (590)
Q Consensus 433 a~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd 512 (590)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 7 899999999999 89999999999 99999999 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHc
Q 007782 513 DMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYEL 561 (590)
Q Consensus 513 ~M~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~ 561 (590)
+|+++||++||++++++++.++.|||++++ |+||.+||.||+++|++.
T Consensus 343 ~m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa~~A~~~ 390 (398)
T 2a9f_A 343 EMQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVRSVVLKS 390 (398)
T ss_dssp HHHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTCCCCC--
T ss_pred HHHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999764
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=2e-108 Score=867.48 Aligned_cols=354 Identities=31% Similarity=0.445 Sum_probs=332.9
Q ss_pred cchhhhcccCccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007782 120 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 199 (590)
Q Consensus 120 ~LFy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 199 (590)
..++++.++|.|+ |||+||||||++|++|+ ++|.++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 6789999999987 89999999999999987 5554444 7999999999999999999999999
Q ss_pred CC-cccchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 007782 200 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 277 (590)
Q Consensus 200 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 277 (590)
++ ||+||+||+.||++||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999999 87 88
Q ss_pred eeeecCCCchHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 278 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 278 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
||||||+++|||++|+|||+ ++|||||||||||+|++||+++|+|++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCC-CchhchhhccccCC---CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 431 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~-l~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~ 431 (590)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999543 99999999987543 4689999998 899999999 79999999999
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccC
Q 007782 432 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 511 (590)
Q Consensus 432 Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~It 511 (590)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 99999999999 99999999 589999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHH
Q 007782 512 DDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKA 558 (590)
Q Consensus 512 d~M~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A 558 (590)
|+|+++||++||+++ ++.++.|||++++ |+||.+||.||+++|
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa~~A 388 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVKGSA 388 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHHhhC
Confidence 999999999999999 6788999999999 999999999999875
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=3.1e-87 Score=717.22 Aligned_cols=385 Identities=30% Similarity=0.439 Sum_probs=351.3
Q ss_pred cchhhhcccCccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeecCCCCC
Q 007782 120 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 199 (590)
Q Consensus 120 ~LFy~ll~~~~ee~lPivYTPtVG~ac~~~s~i~r~p~Glyis~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 199 (590)
..++++.+++.+. |||+||||||++|++|+ +|++++++ ||.++++|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~~-l~~~YtP~v~~~c~~~~-------------~~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESREE-LTLAYTPGVAEPCKEIA-------------RDPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHHH-HHHHSTTTTHHHHHHHH-------------HCGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHHH-CeeEECchhHHHHHHHH-------------HCHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 4678888888875 89999999999999998 36677774 888999999999999999999999
Q ss_pred CC-cccchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 007782 200 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 277 (590)
Q Consensus 200 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~-~l 277 (590)
.+ ++|+++||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcE
Confidence 97 8999999999999999999 999999992 1 588888888766 55 56
Q ss_pred eeeecCCCchHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 278 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 278 IqfEDf~~~~Af~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
||||||+.||||++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|...
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999986 6999999999999999999999999999999999999999999999999999863
Q ss_pred hcCCChhhhcCcEEEEc----CCCcccCCCcCC---CchhchhhccccC---CCCCHHHHhcccCCcEEEeccCCC-CCC
Q 007782 356 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 424 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD----~~GLv~~~R~~~---l~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~F 424 (590)
|+++ ++||++| ++||++++ .. |.++|++|++... ...+|.|+++. +|+|||+|+.+ |+|
T Consensus 209 --G~~~----~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVKP----ENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCCG----GGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCCc----CeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 8753 7999999 99999887 24 7788888987533 24689999986 89999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHH
Q 007782 425 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 504 (590)
Q Consensus 425 t~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~ 504 (590)
++++++.|+ ++||||+||||+ +||++++|.+| |++++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999885 899999999999 89999999998 89999999 58999999999999999999999
Q ss_pred hCCcccCHHHHHHHHHHHHcccCccccCCCcccCCCCCchhhHHHHHHHHHHHHHHcCCCCCCCCchhHHHHHHhCCccc
Q 007782 505 SGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRKISANIAANVAAKAYELGVATRLPRPQNLVKCAESCMYTP 584 (590)
Q Consensus 505 s~a~~Itd~M~~aAA~aLA~~v~~~~~~~g~l~P~~~~ir~vs~~VA~aVa~~A~~~G~a~~~~~~~dl~~~i~~~m~~P 584 (590)
++|++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.+|+++|+++|+|+..++|+|+.+|+++.||.+
T Consensus 342 ~~a~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~~~a~~~g~a~~~~~~~~~~~~~~~~~~~~ 418 (439)
T 2dvm_A 342 VRARTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVAEEAMKEGVARTKVKGEWVEEHTIRLIEFY 418 (439)
T ss_dssp TTCSCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHHHHHHHHTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhhhh
Confidence 9999999999999999999999876 78999999999 99999999999999999999987777889999999999987
Q ss_pred CC
Q 007782 585 VY 586 (590)
Q Consensus 585 ~Y 586 (590)
.|
T Consensus 419 ~~ 420 (439)
T 2dvm_A 419 EN 420 (439)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.89 E-value=1.7e-08 Score=108.62 Aligned_cols=168 Identities=11% Similarity=0.188 Sum_probs=125.7
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHH---------------------HHHc-------CCCcee-
Q 007782 252 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF- 302 (590)
Q Consensus 252 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL---------------------~ryr-------~~~~~F- 302 (590)
-+-|||...++..+.. ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 112 ~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~ 186 (435)
T 3gvp_A 112 ESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMN 186 (435)
T ss_dssp CCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEE
T ss_pred CCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEE
Confidence 3567888878776642 346787776 55543333222 3443 269999
Q ss_pred ---------ccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 303 ---------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 303 ---------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
.|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++++|+
T Consensus 187 vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D~ 251 (435)
T 3gvp_A 187 VNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTEI 251 (435)
T ss_dssp CTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECS
T ss_pred ecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeC
Confidence 899999999999999754 79999999999999999999999988643 64 5888876
Q ss_pred CCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 007782 374 KGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSE 452 (590)
Q Consensus 374 ~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aE 452 (590)
+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .|
T Consensus 252 dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~E 312 (435)
T 3gvp_A 252 DPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--TE 312 (435)
T ss_dssp CHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--TT
T ss_pred Chh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--cc
Confidence 421 111121 11123579999986 99999999888999999999996 788999999997 88
Q ss_pred CCHHHH
Q 007782 453 CTAEEA 458 (590)
Q Consensus 453 ctpedA 458 (590)
+..+..
T Consensus 313 Id~~~L 318 (435)
T 3gvp_A 313 IDVASL 318 (435)
T ss_dssp BTGGGG
T ss_pred CCHHHH
Confidence 887665
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.84 E-value=9.1e-09 Score=110.69 Aligned_cols=130 Identities=17% Similarity=0.198 Sum_probs=105.5
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007782 297 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 366 (590)
Q Consensus 297 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~ 366 (590)
..+|+| .|++.||+.+++.|++ |.++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 579999 8999999999999996 4579999999999999999999999998653 63
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007782 367 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 367 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+++++|++. .+...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111121 11123589999986 99999988888999999999996 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 007782 446 NPTSQSECTAEEAYT 460 (590)
Q Consensus 446 NPt~~aEctpedA~~ 460 (590)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 998 8999987765
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.23 E-value=1.3e-06 Score=92.46 Aligned_cols=219 Identities=18% Similarity=0.238 Sum_probs=128.6
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--cccchhhhHHHHHHhcCCCCCceeeEEeecCCCchhcccCc
Q 007782 165 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 242 (590)
Q Consensus 165 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 242 (590)
++..++++.++ +.+|+|.++++..+|++|.+.. |+.|..+ ..+|. | +++|.+.+-.
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~p~------- 83 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNAPL------- 83 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSCCC-------
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCCCC-------
Confidence 34556666553 4689999999999999999865 8888887 66665 2 4677654311
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCC-CchHHHHHHHHcCCCceec-cCCC----------chH
Q 007782 243 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDIQ----------GTA 310 (590)
Q Consensus 243 ~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~-~~~Af~lL~ryr~~~~~FN-DDiQ----------GTa 310 (590)
.+.++.+++ ...+|.|=..+ ++..++-|.+ ..+.+|+ +.+. .+.
T Consensus 84 -------------------~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 84 -------------------DDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp -------------------HHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred -------------------HHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHH
Confidence 233333322 11222222221 2333333333 4677773 2222 355
Q ss_pred HHHHHHHHHHHHH----hCC----------CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 311 SVVLAGVVAALKL----IGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 311 aV~LAgll~A~r~----~g~----------~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
...+|| .+|++. .++ .+.+.+|+|+|+|.+|.++++.+... |. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCHH
Confidence 555555 333333 222 26689999999999999999887542 62 5888988643
Q ss_pred ccCCCcCCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEeccCCC-----CCCCHHHHHHHH
Q 007782 377 IVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMA 433 (590)
Q Consensus 377 v~~~R~~~l~~------------~k~~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma 433 (590)
..... ..+.. .+..|++.... ..+|.+.++. .|++|++...+ .+++++.++.|.
T Consensus 207 ~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 21100 00100 00011111000 0147788875 89999996443 679999999996
Q ss_pred cCCCCcEEEecCCCC
Q 007782 434 SFNEKPLILALSNPT 448 (590)
Q Consensus 434 ~~~erPIIFaLSNPt 448 (590)
+..+|+-+|+|.
T Consensus 284 ---~g~vIVdva~~~ 295 (401)
T 1x13_A 284 ---AGSVIVDLAAQN 295 (401)
T ss_dssp ---TTCEEEETTGGG
T ss_pred ---CCcEEEEEcCCC
Confidence 778999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.87 E-value=6.4e-05 Score=81.46 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=97.8
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007782 297 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 366 (590)
Q Consensus 297 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~ 366 (590)
-.+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 479999 5677999999888885 6779999999999999999999999988642 63
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007782 367 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 367 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+++++|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 5777775321 111111 11123579999986 99999998888899999999996 788888888
Q ss_pred CCCCCCCCCHHHH
Q 007782 446 NPTSQSECTAEEA 458 (590)
Q Consensus 446 NPt~~aEctpedA 458 (590)
... .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 876 66665444
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.79 E-value=5.8e-05 Score=82.36 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=100.9
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcC
Q 007782 297 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 366 (590)
Q Consensus 297 ~~~~~F----------NDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~ 366 (590)
-.+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.++|+.+... |.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----GA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----CC-------
Confidence 479999 6889999999999886 7899999999999999998888888877643 63
Q ss_pred cEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 367 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 367 ~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
+++++|++.. + .... +...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888877421 0 1111 1111123467777765 89999999888899999999885 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 007782 447 PTSQSECTAEEAYTW 461 (590)
Q Consensus 447 Pt~~aEctpedA~~w 461 (590)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888776555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.21 E-value=0.0034 Score=65.57 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=119.8
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeecCCCCCCC--cccchhhhHHHHHHhcCCCCCceeeEEeecCCC-----chhc
Q 007782 166 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 238 (590)
Q Consensus 166 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----Ne~L 238 (590)
+..+.++.+ .+.+|+|.++++.-.|+.|.... |..|..++-.++ ++.| |+|.+.+- +++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 345555554 35789999999999999998754 777877766665 3444 66666532 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceeccCCCchHHHHH
Q 007782 239 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 314 (590)
Q Consensus 239 ---L-~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGTaaV~L 314 (590)
| ..-.+++.-+.- ++. +.++++.+ -|- .++.+|-.....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112223332221 111 11222222 111 1222222211000 00111221 11122
Q ss_pred H---HHHHHHHHhCC----------CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCC
Q 007782 315 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 381 (590)
Q Consensus 315 A---gll~A~r~~g~----------~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 381 (590)
| +++.+.+..++ .+.+.|++|+|+|.+|.+++..+.. .|. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 45556665553 6789999999999999999887754 262 3888987632 1
Q ss_pred cCCCchhch-----------------hhccccC------CCCCHHHHhcccCCcEEEecc---C--CCCCCCHHHHHHHH
Q 007782 382 KDSLQHFKK-----------------PWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAMA 433 (590)
Q Consensus 382 ~~~l~~~k~-----------------~fA~~~~------~~~~L~e~V~~vkPtvLIG~S---~--~~g~Ft~evv~~Ma 433 (590)
.+.+..+.. .|++... ....|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 100000000 1111100 00127777775 99999988 3 23478999999995
Q ss_pred cCCCCcEEEecCCC
Q 007782 434 SFNEKPLILALSNP 447 (590)
Q Consensus 434 ~~~erPIIFaLSNP 447 (590)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67789988864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.00 E-value=0.00069 Score=72.42 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=71.6
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc--------------hhchhh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 392 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~--------------~~k~~f 392 (590)
.+.+.|++|+|+|.+|.++|+.+... |. +++++|++.-......+ +- .-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988643 62 68899987532111000 00 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCC
Q 007782 393 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 454 (590)
Q Consensus 393 A~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct 454 (590)
++...+ ..+|.|+++. .|++|++... +.+||+++++.|. +..||+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2378999987 9999998533 3579999999996 8899999995 33345554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.86 E-value=0.0014 Score=69.60 Aligned_cols=100 Identities=22% Similarity=0.232 Sum_probs=67.4
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-------------chhhcc
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-------------KKPWAH 394 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-------------k~~fA~ 394 (590)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-.. +.+... ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l----~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVA----EQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGH----HHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHH----HHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988653 63 588999874211 001100 011221
Q ss_pred c------cCCCCCHHHHhcccCCcEEEeccCC-----CCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 395 E------HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 395 ~------~~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
. .....+|.++++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 1 0012368899986 9999997533 3579999999996 788999998654
No 16
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.67 E-value=0.029 Score=60.36 Aligned_cols=178 Identities=19% Similarity=0.186 Sum_probs=125.7
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH-HH-HHHHHc---CC--Ccee----------ccCCCchHHHHH
Q 007782 252 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-FE-LLAKYG---TT--HLVF----------NDDIQGTASVVL 314 (590)
Q Consensus 252 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A-f~-lL~ryr---~~--~~~F----------NDDiQGTaaV~L 314 (590)
.+..|-..|...|++++.+.-||+.-|-=+|++..-. .. +.+.|+ .. -.++ .+--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 3456667788999999999999988888899986322 22 445663 21 1222 233445888888
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc-hhhc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 393 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k-~~fA 393 (590)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+.+.|++|-|++.. .|+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~--GlD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPD--GLDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTT--CCCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHH
Confidence 88899999999999999999999999999999998764 53 4467999999999764 343321 1121
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 394 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 394 ~~~~-------~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
.... ..-+-.+ +-.++.||||=+..+ +..|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 345789999987775 79999988876 5788888888 65
No 17
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.28 E-value=0.024 Score=56.82 Aligned_cols=122 Identities=15% Similarity=0.174 Sum_probs=80.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 387 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 387 (590)
.+-+|+=.++..++...|..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 344555555555666778899999999999999999999987542 52 688888752 11 111
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC-CCCCCCCCCHHHH
Q 007782 388 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQSECTAEEA 458 (590)
Q Consensus 388 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~aEctpedA 458 (590)
.+..-++. -...+|.+.++. .|++|-... .+.++++.++.|. +..+++=+| +|. ++..+.+
T Consensus 194 ~~~~g~~~-~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IAEMGMEP-FHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HHHTTSEE-EEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HHHCCCee-cChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 11000010 012368888875 999997664 5799999999885 567888888 443 3455444
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.27 E-value=0.067 Score=57.44 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=126.1
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHc---CC--Ccee----------ccCCCchHHHHH
Q 007782 252 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVF----------NDDIQGTASVVL 314 (590)
Q Consensus 252 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~--~~~F----------NDDiQGTaaV~L 314 (590)
.+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+ .. -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 34556777899999999999999999999999875321 2455663 11 1222 222334766667
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCchhch-hh
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFKK-PW 392 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~~~k~-~f 392 (590)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+. | -+++ +.|++|-|++... |+..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 77888899999999999999999999999999988652 5 3455 9999999987643 432211 11
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007782 393 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 460 (590)
Q Consensus 393 A~~~~~~~----~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEctpedA~~ 460 (590)
........ +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 0112 34578999998775 679999988877 5679999998 653 33 344443
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.23 E-value=0.25 Score=53.60 Aligned_cols=183 Identities=16% Similarity=0.110 Sum_probs=124.9
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH-----HHHHHHHcCC-Ccee----------ccCCCchHHHHH
Q 007782 251 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVL 314 (590)
Q Consensus 251 R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A-----f~lL~ryr~~-~~~F----------NDDiQGTaaV~L 314 (590)
..+..|-..|...||..+.+..||+.=|--.|++..-. +...++++.. -.|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 34667788899999999999999999999999975432 3333444432 2333 123334777777
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+-|++|-|++.. .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88889999999999999999999999999999998753 63 4566778999888653 34433221111
Q ss_pred c--cCCCCCHHH-------------HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 395 E--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 395 ~--~~~~~~L~e-------------~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
+ ......+.+ -+-.++.|||+=+..+ +.+|++-++.+.+. .-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0 000011111 1334689999988774 69999999998542 2357777777 55
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.01 E-value=0.014 Score=60.25 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=77.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 386 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 386 (590)
+-.-+|-.|++-.++..+.+++..++||+|+| ..|.-+|.++... | ..+.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44457788899999999999999999999999 5799999888652 4 357888643
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 387 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 387 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999975 45566666654
No 21
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.90 E-value=0.43 Score=51.81 Aligned_cols=190 Identities=16% Similarity=0.176 Sum_probs=127.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH--HHHHHc---CCCc-ee----------ccCCCchHHHHHH
Q 007782 252 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE--LLAKYG---TTHL-VF----------NDDIQGTASVVLA 315 (590)
Q Consensus 252 ~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~--lL~ryr---~~~~-~F----------NDDiQGTaaV~LA 315 (590)
.+..|...|-..||..+.+.+||..=|-=+|++..-... +.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 345677788888999998888999999999998643221 445554 2221 11 1122346766777
Q ss_pred HHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----
Q 007782 316 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 391 (590)
Q Consensus 316 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~---- 391 (590)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|++.. .|+..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7888888899999999999999999999999998764 53 3345889999888754 34332211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCCCCHHH
Q 007782 392 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 457 (590)
Q Consensus 392 -----------fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEctped 457 (590)
|+...+... +- +-+-.++.||||=+.. ++.+|++-++.+.+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111001100 11 1133568999998777 67999999999843 25689999998 664 44 556
Q ss_pred Hhc
Q 007782 458 AYT 460 (590)
Q Consensus 458 A~~ 460 (590)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 22
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.86 E-value=0.016 Score=58.56 Aligned_cols=88 Identities=15% Similarity=0.199 Sum_probs=59.7
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 393 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 393 (590)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999777777766654 364 679988775 222 122222222
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 394 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 394 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
.. .-+..+|.++++. +|++|-++..|
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888886 89999887754
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.85 E-value=0.02 Score=58.63 Aligned_cols=83 Identities=19% Similarity=0.265 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh
Q 007782 310 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 388 (590)
Q Consensus 310 aaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~ 388 (590)
.-++-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567778899999999999999999999976 899999988652 53 46777542
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007782 389 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 430 (590)
Q Consensus 389 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 430 (590)
..+|.+.++. +|++|...+.++.++.|+|+
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk 224 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK 224 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC
Confidence 1368899987 99999999999999998874
No 24
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.52 E-value=0.032 Score=57.11 Aligned_cols=92 Identities=16% Similarity=0.260 Sum_probs=73.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 007782 309 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 387 (590)
Q Consensus 309 TaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 387 (590)
-.-++-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34577888999999999999999999999876 899999998753 52 47777652
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEec
Q 007782 388 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 444 (590)
Q Consensus 388 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 444 (590)
..+|.+.++. +|++|...+.++.++.++|+ +.-+|+=+
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDV 231 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDV 231 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEe
Confidence 1368899987 99999999999999998884 44455555
No 25
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.45 E-value=0.031 Score=57.04 Aligned_cols=82 Identities=11% Similarity=0.213 Sum_probs=67.1
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 386 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 386 (590)
+-.-+|-.|++..++..+ |++.++|++|+|. .|..+|.++... |. .+++++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 334577789999999998 9999999999984 899999998753 52 47777652
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHH
Q 007782 387 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVI 429 (590)
Q Consensus 387 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv 429 (590)
..+|.+.++. +|++|...+.++.++++++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~v 212 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMV 212 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhc
Confidence 1468899988 9999999999999998886
No 26
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.41 E-value=0.22 Score=53.74 Aligned_cols=178 Identities=17% Similarity=0.152 Sum_probs=120.7
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHc---CC--Ccee----------ccCCCchHHHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVF----------NDDIQGTASVVL 314 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~--~~~F----------NDDiQGTaaV~L 314 (590)
+..|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+ .. -.++ .+.-.-||-=+.
T Consensus 141 s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 141 SPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 4456678899999999999999999999999874 222 455663 11 1222 223334666666
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC---Cchhchh
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS---LQHFKKP 391 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~---l~~~k~~ 391 (590)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++...=+ |..++..
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~~~ 288 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHVQE 288 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHHHh
Confidence 77788889999999999999999999999999988653 53 2344999999998765311 2222222
Q ss_pred hcc--ccC--CCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 392 WAH--EHE--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 392 fA~--~~~--~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
+-. +-. ..-+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |+
T Consensus 289 ~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 289 FGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp TSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred cCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 110 000 0012334 44578999997766 568888888777 5678888888 65
No 27
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.34 E-value=0.029 Score=57.50 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=75.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 386 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 386 (590)
+-.-+|-.|++-.++..+.++++.++||+|+|. .|.-+|.++... | ..+++++++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 445677888999999999999999999999995 699998887642 4 357777632
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 387 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 387 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
..+|.+.++. +|++|+..+.++.+|+++|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999998873 34455555543
No 28
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.32 E-value=0.28 Score=52.69 Aligned_cols=178 Identities=14% Similarity=0.182 Sum_probs=110.5
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHc---CCC---ceec----------cCCCchHHHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TTH---LVFN----------DDIQGTASVVL 314 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~~---~~FN----------DDiQGTaaV~L 314 (590)
+..|-..|...|++++.+.-||..-|-=+|++..-.. -+.+.|+ ... .++. +.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 4456677899999999999999999999999975221 2455664 221 2222 22234666666
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC-----CcccCCCcCCCchhc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK-----GLIVSSRKDSLQHFK 389 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~-----GLv~~~R~~~l~~~k 389 (590)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++ |-|++... |+..+
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~~ 263 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG------KVCAIAEWDRNEGNYALYNENG--IDFKE 263 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC------CEEECCBCCSSSCSBCCBCSSC--CCHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC------EEEEEEecCCCccceEEECCCC--CCHHH
Confidence 67788889999999999999999999999999988653 63 334489999 99997643 43221
Q ss_pred h-hhccccCCCCC------H-HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 390 K-PWAHEHEPVNN------L-LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 390 ~-~fA~~~~~~~~------L-~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
. .+......+.. + .+.+-.++.||||=++. ++.+|++-.+.+ .-.+|.-=+| |+
T Consensus 264 l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 264 LLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1 11111111100 0 01223456777776654 557777777666 4566666666 54
No 29
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.25 E-value=0.041 Score=56.37 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh
Q 007782 310 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 388 (590)
Q Consensus 310 aaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~ 388 (590)
.-++-.|++..++..+.++++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3467788899999999999999999999875 899999998652 42 46666542
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEec-CCCC
Q 007782 389 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL-SNPT 448 (590)
Q Consensus 389 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL-SNPt 448 (590)
..+|.+.++. +|++|+..+.++.++.|+|+ +.-+|+=+ +||.
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899987 99999999999999998884 44455554 3554
No 30
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.23 E-value=0.069 Score=53.22 Aligned_cols=121 Identities=17% Similarity=0.255 Sum_probs=75.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
..||.|+|+|..|.++|..+... |.. ..+++++|++ . +.+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~---~~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----L---DKLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----S---HHHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----H---HHHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988753 642 2478888874 1 1132222222 11112578899985
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCCCCCCCCCHHHHhcccCC--cEEEecCCCCCccee
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTSQSECTAEEAYTWSKG--RAIFASGSPFDPFEY 479 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~~aEctpedA~~wt~G--~aifAsGSPF~pv~~ 479 (590)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|+.|...
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 78877 34344 4568888888764 56668888888774 3444444432 33322 35555543
No 31
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.19 E-value=0.03 Score=58.09 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHH---------hCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCC
Q 007782 312 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 381 (590)
Q Consensus 312 V~LAgll~A~r~---------~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 381 (590)
++-.|.+-.++. .|.++++.++||+|+|. .|.-+|.++... | .+++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 334455666666 68899999999999996 598888888642 4 3589999886655555
Q ss_pred cCCCchhchhhccccCC---C--CCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 382 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 382 ~~~l~~~k~~fA~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
...+... ++.... . .+|.++++. .|++|+..+.++. +|.++|+ +.-+|+-++-|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434311 121100 1 469999998 9999999999887 8998873 334555555553
No 32
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.13 E-value=0.022 Score=57.55 Aligned_cols=86 Identities=22% Similarity=0.246 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 393 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 393 (590)
-.|++.+++..+.++++.+++|+|||.+|.+|+..|.. .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 45677888888999999999999999888888777754 364 578888875 222222321 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 394 HEHEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 394 ~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
. ....++.++++. +|++|-++..|
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G 186 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG 186 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC
Confidence 0 112346666665 89999776654
No 33
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.99 E-value=0.046 Score=56.37 Aligned_cols=95 Identities=24% Similarity=0.326 Sum_probs=73.8
Q ss_pred CchHHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCC
Q 007782 307 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL 385 (590)
Q Consensus 307 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l 385 (590)
.|-.-++-.|++..++..+.+|++.++|++|+|. .|..+|.+|... |. .+++++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3444677788999999999999999999999876 899999998753 52 47788762 1
Q ss_pred chhchhhccccCCCCCHH--HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007782 386 QHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 386 ~~~k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.+|. +.++. .|++|...+.++.++.++|+ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1354 88887 99999999999999998873 445665543
No 34
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.99 E-value=0.54 Score=51.22 Aligned_cols=179 Identities=15% Similarity=0.165 Sum_probs=119.4
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHc---CC-Ccee----------ccCCCchHHHHHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT-HLVF----------NDDIQGTASVVLAG 316 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~-~~~F----------NDDiQGTaaV~LAg 316 (590)
+..|-..|-..||..+.+..||..=|-=+|++..-.. -+.+.|+ .. ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 3456667788899999988899988999999874221 1445554 21 1111 11223466666667
Q ss_pred HHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCchh-------
Q 007782 317 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 388 (590)
Q Consensus 317 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~~~------- 388 (590)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|++.. .|+..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999998653 53 444 788888887653 24222
Q ss_pred -c-------hhhccccCCCC--CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 389 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 389 -k-------~~fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
| ..|+...+... +-.+.. .++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 12221000000 001222 568999998775 67999999999854 45679998898 65
No 35
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.93 E-value=0.012 Score=52.18 Aligned_cols=88 Identities=16% Similarity=0.228 Sum_probs=50.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 387 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 387 (590)
|..+|+.+++-.+-+.. +.|++|+|+|..|..++..+.. .|. + ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555443333322 7899999999999888776643 242 4 8888864 111 222
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 388 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 388 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
..+.|.-+.....++.++++. .|++|=+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 222221111234578888875 88888666543
No 36
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.85 E-value=0.29 Score=52.58 Aligned_cols=177 Identities=19% Similarity=0.192 Sum_probs=116.5
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHc---CC--CceeccCC----------CchHHHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TT--HLVFNDDI----------QGTASVVL 314 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~--~~~FNDDi----------QGTaaV~L 314 (590)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ .. ..++.-+- .-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678899999999999999999999999973 222 335552 21 12332221 12555555
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEcCCCcccCCCcCCCc---hhch
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQ---HFKK 390 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~-lvD~~GLv~~~R~~~l~---~~k~ 390 (590)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +++ +.|++|-|++...=+++ .++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 5677788889999999999999999999999988754 253 444 89999999876421121 2221
Q ss_pred h--------hcccc--CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 391 P--------WAHEH--EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 391 ~--------fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
. |.... ....+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1 11000 11101123 34568899997664 668888877766 5678888888 65
No 37
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.77 E-value=0.054 Score=53.74 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=57.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-------hccc--------
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE-------- 395 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-------fA~~-------- 395 (590)
.||.|+|+|..|.+||..++.. |. +++++|++- + .++..+.. +...
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~~~~~~~~g~~~~~~~ 65 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDINT----D---ALDAAKKRFEGLAAVYEKEVAGAADGA 65 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSH----H---HHHHHHHHHHHHHHHHHHHSTTCTTTH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCH----H---HHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 6899999999999999988753 63 688888751 1 12211111 1000
Q ss_pred -------cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007782 396 -------HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 450 (590)
Q Consensus 396 -------~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 450 (590)
.....++.|+++. .|++|=.-...-...+++.+.+.+....-.|+ .||-++.
T Consensus 66 ~~~~~~~i~~~~~~~~~~~~--aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il-~s~tS~~ 124 (283)
T 4e12_A 66 AQKALGGIRYSDDLAQAVKD--ADLVIEAVPESLDLKRDIYTKLGELAPAKTIF-ATNSSTL 124 (283)
T ss_dssp HHHHHHHCEEESCHHHHTTT--CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEE-EECCSSS
T ss_pred HHHHHcCeEEeCCHHHHhcc--CCEEEEeccCcHHHHHHHHHHHHhhCCCCcEE-EECCCCC
Confidence 0123578888876 89888432211014566677776655444444 3454443
No 38
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.75 E-value=0.17 Score=53.23 Aligned_cols=102 Identities=16% Similarity=0.307 Sum_probs=63.0
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57899999999999999998887643 64 578888864 111 1111112211111124677877
Q ss_pred cccCCcEEEeccCCC-CCCCHHHHHH--HH-cCCCCcEEEecCCCC
Q 007782 407 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 448 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 448 (590)
+. .|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 64 89999877654 3567888887 43 222334555566553
No 39
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=94.66 E-value=0.14 Score=53.78 Aligned_cols=166 Identities=18% Similarity=0.210 Sum_probs=106.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHcC---CCcee---ccCCCchHHHHHHHHHHHHHHhC
Q 007782 255 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIG 325 (590)
Q Consensus 255 ~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr~---~~~~F---NDDiQGTaaV~LAgll~A~r~~g 325 (590)
.+-++++..|.+++.+..|+ -|-=+|++.. ..+ +.+.|+. +-..+ .|--.-||-=+.-++-.+++..|
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~-~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G 169 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTN-SADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRG 169 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCC-HHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCC-HHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 45567788888888887765 4788899763 332 5566652 11111 11111255555667778888889
Q ss_pred C-CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 326 G-TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 326 ~-~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
. +|++.+++|.|.|..|..+|+.+.. .|. ++++.|++ ..| ..+.+.|- . ..-++.|
T Consensus 170 ~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~----~~~a~~~g--a-~~v~~~e 226 (355)
T 1c1d_A 170 LGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER----VAHAVALG--H-TAVALED 226 (355)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH----HHHHHHTT--C-EECCGGG
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH----HHHHHhcC--C-EEeChHH
Confidence 8 8999999999999999999988754 363 57788864 111 11222221 0 1124445
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CCCCCC
Q 007782 405 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSE 452 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aE 452 (590)
..+ ++.|+|+=+ +.++.++++-++.| .-.+|.--+| |+..+|
T Consensus 227 ll~-~~~DIliP~-A~~~~I~~~~~~~l----k~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 227 VLS-TPCDVFAPC-AMGGVITTEVARTL----DCSVVAGAANNVIADEA 269 (355)
T ss_dssp GGG-CCCSEEEEC-SCSCCBCHHHHHHC----CCSEECCSCTTCBCSHH
T ss_pred hhc-CccceecHh-HHHhhcCHHHHhhC----CCCEEEECCCCCCCCHH
Confidence 443 578999954 45779999999999 3568888887 653334
No 40
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.65 E-value=0.047 Score=56.21 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999887777777654 364 689988874 2211111111122211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEeccCCC
Q 007782 395 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 395 ~------~~~~~~L---~e~V~~vkPtvLIG~S~~~ 421 (590)
. ..+..++ .+.++. .|++|-++..|
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566665 89999877755
No 41
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.60 E-value=0.86 Score=48.82 Aligned_cols=178 Identities=17% Similarity=0.174 Sum_probs=117.8
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchH--HHHHHHHc---CC--CceeccC----------CCchHHHHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TT--HLVFNDD----------IQGTASVVLA 315 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~A--f~lL~ryr---~~--~~~FNDD----------iQGTaaV~LA 315 (590)
+.+|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ .. ..++.-+ -.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 445667788999999999889998899999987521 11345552 21 1233222 2236655666
Q ss_pred HHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc-hhhcc
Q 007782 316 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWAH 394 (590)
Q Consensus 316 gll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k-~~fA~ 394 (590)
++-.+++..|.++++.||+|.|.|..|...|++|.+ +.|. +=+-+.|++|-+++... |+..+ +.+..
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~~ 262 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYKK 262 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHHH
Confidence 777888889999999999999999999999988865 0253 33448999999887642 33311 11111
Q ss_pred ccCCC--------CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 395 EHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 395 ~~~~~--------~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
....+ -+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 263 EHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred hhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11110 02233 45678999997766 568888888776 5568887777 55
No 42
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.60 E-value=0.13 Score=55.96 Aligned_cols=123 Identities=15% Similarity=0.207 Sum_probs=87.3
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC
Q 007782 305 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 384 (590)
Q Consensus 305 DiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~ 384 (590)
.+.|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+... |. +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3444545555662 25688899999999999999999999998653 63 6888887521 00
Q ss_pred CchhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007782 385 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 460 (590)
Q Consensus 385 l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~ 460 (590)
+. .+...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.|.-. .|+.-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 01 01111112479999986 99999998878899999999985 567888787754 6677776665
No 43
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.54 E-value=0.034 Score=56.22 Aligned_cols=87 Identities=23% Similarity=0.257 Sum_probs=56.8
Q ss_pred HHHHHHHHHhC-CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc
Q 007782 315 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 393 (590)
Q Consensus 315 Agll~A~r~~g-~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA 393 (590)
.|++.+++..| .++++.+++|+|||.+|.++|..|.. .|. ++++++|+. .++ .......+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 578888874 111 122222221
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 394 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 394 ~---~~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
. ......++.++++. .|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011245666665 89999887755
No 44
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.30 E-value=0.085 Score=52.85 Aligned_cols=110 Identities=21% Similarity=0.203 Sum_probs=72.4
Q ss_pred HHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCC
Q 007782 321 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 400 (590)
Q Consensus 321 ~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~ 400 (590)
++..+..+.+.+++|+|+|..|..+|+.+... |. +++.+|+.- .+ +...+..-++. ....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~~-~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLVP-FHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCEE-EEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCeE-Echh
Confidence 44568899999999999999999999987642 53 688888751 11 11111100110 0124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHH
Q 007782 401 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEA 458 (590)
Q Consensus 401 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA 458 (590)
+|.|.++. .|++|-.... +.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p~-~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIPS-MILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCSS-CCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCCh-hhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 9999977664 799999888774 567888888632 34445443
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.09 E-value=1.4 Score=47.66 Aligned_cols=178 Identities=17% Similarity=0.188 Sum_probs=116.8
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHH--HHHHHHc---CC--Cceecc----------CCCchHHHHHHH
Q 007782 254 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVFND----------DIQGTASVVLAG 316 (590)
Q Consensus 254 g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af--~lL~ryr---~~--~~~FND----------DiQGTaaV~LAg 316 (590)
..|-..|-..||..+.+..||..-|-=+|++..-.. -+.+.|+ +. .-++-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 356677778899999888999999999999876221 1333443 22 122221 113366556667
Q ss_pred HHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCC-chh-------
Q 007782 317 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 388 (590)
Q Consensus 317 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l-~~~------- 388 (590)
+-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|++.. .| ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999888664 53 3344788888888753 24 211
Q ss_pred -c-------hhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 389 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 389 -k-------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
| ..|+.. .+.. +-.+. -.++.|+|+=+.. ++..|++-++.+.+ |.-.+|.-=+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e~-~~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEKP-WGQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCCG-GGSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEe-Cchhh-hcCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 0000 00112 2568999997764 67999999999864 23578888888 65
No 46
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.05 E-value=0.07 Score=53.04 Aligned_cols=124 Identities=21% Similarity=0.319 Sum_probs=73.8
Q ss_pred HHHHHHHHHHhcC--------CCeeeeeecCCCchHHHHHHHHcCCC---ceeccCCCchHHHHHHHHHHHHHHhCCCCc
Q 007782 261 LDEFMSAVKQNYG--------EKVLIQFEDFANHNAFELLAKYGTTH---LVFNDDIQGTASVVLAGVVAALKLIGGTLA 329 (590)
Q Consensus 261 idefv~av~~~fG--------p~~lIqfEDf~~~~Af~lL~ryr~~~---~~FNDDiQGTaaV~LAgll~A~r~~g~~l~ 329 (590)
+++|++.++..|. -..++.+=|- ++.|..+=. =+.+ .=+|-|- .|++.+++.. .++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGA--vNTi~~~~G~NTD~--------~G~~~~l~~~--~~~ 108 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKA--VNCVFRGKGYNTDW--------VGVVKSLEGV--EVK 108 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTC--CCEEETTEEECCHH--------HHHHHHTTTC--CCC
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCc--ceEeecCEEEcchH--------HHHHHHHHhc--CCC
Confidence 5777777664442 2245566666 666665410 0111 3334442 3677777654 578
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
+ +++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 109 ~-~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~- 166 (253)
T 3u62_A 109 E-PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK- 166 (253)
T ss_dssp S-SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT-
T ss_pred C-eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC-
Confidence 8 99999999999998887765 364 679999885 222122221 1211 123467788875
Q ss_pred CCcEEEeccCC
Q 007782 410 KPTILIGSSGV 420 (590)
Q Consensus 410 kPtvLIG~S~~ 420 (590)
+|++|-++..
T Consensus 167 -aDiVInatp~ 176 (253)
T 3u62_A 167 -AKSLFNTTSV 176 (253)
T ss_dssp -CSEEEECSST
T ss_pred -CCEEEECCCC
Confidence 8999976654
No 47
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.00 E-value=0.11 Score=53.18 Aligned_cols=98 Identities=14% Similarity=0.292 Sum_probs=74.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCccceEEEeCcCh-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc
Q 007782 308 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 386 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~ 386 (590)
+-.-+|-.|++-.++..|.++++.++|++|+|. .|.-+|.++.. .|. -..+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 444567778889999999999999999999996 58888877743 210 1457777432
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 387 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 387 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999984 34577766655
No 48
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.79 E-value=0.11 Score=53.67 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=63.4
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHH
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 403 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~----~~~~~L~ 403 (590)
++..+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667999999999999999888754 26 2 68888874 121 222222333210 0112466
Q ss_pred HHhcccCCcEEEeccCCCCC-----CCHHHHHHHHcCCCCcEEEecCCC
Q 007782 404 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
+.++ +.|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~--~~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVA--EADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHH--TCSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHc--CCCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 7776 48999998877652 5888888885 45577777754
No 49
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.77 E-value=0.12 Score=54.22 Aligned_cols=159 Identities=15% Similarity=0.117 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHcCCC-ceeccC------C---CchHHHHHHHHHHHHHHh-CC
Q 007782 258 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD------I---QGTASVVLAGVVAALKLI-GG 326 (590)
Q Consensus 258 ~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~-~~FNDD------i---QGTaaV~LAgll~A~r~~-g~ 326 (590)
++++..|.+++.+..|+ -|-=+|++..- . .+...-+++ ++---- + .-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~-~-~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV-D-DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH-H-HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH-H-HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677777788887775 46778887533 2 333333333 211111 0 134444444556666664 76
Q ss_pred -CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 327 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 327 -~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ + +.+..+...|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999988653 63 47788853 1 11333333331 111133333
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
. ..+.|++|=+ +..+.++++.++.| .-.+|.--+| |+
T Consensus 227 l-~~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 3 2578999955 45669999988888 3467776666 54
No 50
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.58 E-value=0.19 Score=51.57 Aligned_cols=123 Identities=15% Similarity=0.180 Sum_probs=69.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-------hccc-------
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------WAHE------- 395 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-------fA~~------- 395 (590)
-.||.|+|+|..|.+||..++.+ |. +++++|.+- + .++..+.. ++..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~~----~---~~~~~~~~i~~~l~~l~~~G~~~g~~ 66 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIEP----R---QITGALENIRKEMKSLQQSGSLKGSL 66 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSCH----H---HHHHHHHHHHHHHHHHHHTTCCCSSS
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHHHHHHHHHHHHHcCcccccc
Confidence 36899999999999999998753 64 588888751 1 11111100 0000
Q ss_pred --------cCCCCCHHHHhcccCCcEEEeccCCCC-CCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcE
Q 007782 396 --------HEPVNNLLDAVKVIKPTILIGSSGVGR-TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRA 466 (590)
Q Consensus 396 --------~~~~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~a 466 (590)
.....++.|+++. .|++| .+.... .+.+++.+.+.++...-.|++ ||=++ ..+.+..+......
T Consensus 67 ~~~~~~~~i~~~~~~~eav~~--aDlVi-eavpe~~~~k~~v~~~l~~~~~~~~Ii~-s~tS~---i~~~~la~~~~~~~ 139 (319)
T 2dpo_A 67 SAEEQLSLISSCTNLAEAVEG--VVHIQ-ECVPENLDLKRKIFAQLDSIVDDRVVLS-SSSSC---LLPSKLFTGLAHVK 139 (319)
T ss_dssp CHHHHHHTEEEECCHHHHTTT--EEEEE-ECCCSCHHHHHHHHHHHHTTCCSSSEEE-ECCSS---CCHHHHHTTCTTGG
T ss_pred chHHHhhceEEeCCHHHHHhc--CCEEE-EeccCCHHHHHHHHHHHHhhCCCCeEEE-EeCCC---hHHHHHHHhcCCCC
Confidence 0123589999986 78877 333222 245677777777665444554 44222 44555555443322
Q ss_pred EEecCCCCCcce
Q 007782 467 IFASGSPFDPFE 478 (590)
Q Consensus 467 ifAsGSPF~pv~ 478 (590)
=|.-+-||.|+.
T Consensus 140 r~ig~Hp~~P~~ 151 (319)
T 2dpo_A 140 QCIVAHPVNPPY 151 (319)
T ss_dssp GEEEEEECSSTT
T ss_pred CeEEeecCCchh
Confidence 233445777764
No 51
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.29 E-value=0.22 Score=50.78 Aligned_cols=101 Identities=24% Similarity=0.317 Sum_probs=65.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC---CCCHHHHhc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 407 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~---~~~L~e~V~ 407 (590)
||+|+|| |..|..++.+|+. .|+ ...++++|.+-. .+...+|.+...+ .+ ... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~~-l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-AT-VKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-CE-EEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-ce-EEEecCCCCHHHHhC
Confidence 7999998 9999998877652 354 357999998741 1100012211100 00 001 135888998
Q ss_pred ccCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 408 VIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
. .|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 899885554442 24567888888899998888899998
No 52
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.27 E-value=0.1 Score=52.41 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=62.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch---hchhhcc-ccCC-CCCHHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 405 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~---~k~~fA~-~~~~-~~~L~e~ 405 (590)
.||.|+|||+.|..+|..|+.. |+ ...++++|++- ++.+.+.. +...+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11111110 0001110 0000 1356 67
Q ss_pred hcccCCcEEEeccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 406 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++. .|++|=+...+ |.. -+++++.|.++++..+|+-+|||-.
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 765 89888554432 211 1588888988888888888999984
No 53
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.18 E-value=0.14 Score=55.42 Aligned_cols=44 Identities=23% Similarity=0.321 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 007782 426 KEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 472 (590)
Q Consensus 426 ~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGS 472 (590)
.++++.|.++|+.-+++=.|||. +-+|- -+.++++=++|=-+-|
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~ 183 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHG 183 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCG
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEECCC
Confidence 68999999999999999999998 43332 2334444444433333
No 54
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.09 E-value=0.13 Score=52.13 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|++.+++..|.++++.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt 155 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN 155 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 7889999988999999999999999888888877764 364 689988774
No 55
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=93.03 E-value=0.15 Score=52.49 Aligned_cols=50 Identities=32% Similarity=0.403 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.|++.+++..|.++++.+++|+|||.+|.+||..+.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 364 689999885
No 56
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.02 E-value=0.22 Score=49.39 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=56.9
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
.|++.+++..|.++++.+++|+|+|.+|..+|..+... |. +++++|+. .++ .......|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998888653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 395 EHEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 395 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0112267787775 99999776644
No 57
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.99 E-value=0.14 Score=51.77 Aligned_cols=50 Identities=22% Similarity=0.289 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.|++.+++..|.++++.+++|+|||.+|.+|+..|.. .|. ++|+++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999887777766654 364 679988874
No 58
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.93 E-value=0.14 Score=51.75 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=64.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc------hhhccccCC---CCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK------KPWAHEHEP---VNN 401 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k------~~fA~~~~~---~~~ 401 (590)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++ +.... ..+...... ..+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~~i~~t~d 66 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GI---PQGKALDITHSMVMFGSTSKVIGTDD 66 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SH---HHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hH---HHHHHHHHHhhhhhcCCCcEEEECCC
Confidence 5899999999999999998754 64 1499999852 21 11110 011110111 145
Q ss_pred HHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
+ ++++. .|++|=+.+.+.. +.+++++.+.++++.-+|+-.|||..
T Consensus 67 ~-~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 67 Y-ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp G-GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred H-HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 6 77775 8988865544421 24677888888888899999999973
No 59
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.92 E-value=0.31 Score=53.35 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=73.3
Q ss_pred HHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCC
Q 007782 322 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN 401 (590)
Q Consensus 322 r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~ 401 (590)
+.+|..+.+.+++|+|.|..|.++|+.+... |. +++.+|++.. + .+... ...-...+
T Consensus 269 ~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----~--~~~a~-----~~G~~~~~ 325 (494)
T 3d64_A 269 RATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----C--ALQAA-----MEGYRVVT 325 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----H--HHHHH-----TTTCEECC
T ss_pred hccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----h--HHHHH-----HcCCEeCC
Confidence 6789999999999999999999999988532 53 5888877521 0 00100 11111247
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
|.|+++. .|+++......++++++.++.|. +.-||.=.|...
T Consensus 326 l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 326 MEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp HHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred HHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 9999986 99999998778899999999995 567888777754
No 60
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.87 E-value=0.16 Score=52.18 Aligned_cols=101 Identities=19% Similarity=0.326 Sum_probs=66.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhccccCCC---CCHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLL 403 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~----~l~~~k~~fA~~~~~~---~~L~ 403 (590)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+- ++-+ ++.+.. .+....... .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999862 2111 011111 111111112 5788
Q ss_pred HHhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 404 DAVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD 136 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH
Confidence 88886 89988655433 32 14678888999998888888899984
No 61
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=92.71 E-value=0.74 Score=48.63 Aligned_cols=185 Identities=12% Similarity=0.077 Sum_probs=111.1
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 298 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 298 ~~~~FNDDiQ---GTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+.+.|.--- .+|=-+++.+++..|..|..|.+.+|.|+|.|..|-.+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 5666664332 234458999999999999999999999999999999999988643 64 57777753
Q ss_pred CcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc---C-----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 375 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 375 GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
.- . .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~----------~--~~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ----------A--RE---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH----------H--HS---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh----------h--hc---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 10 0 00 01123579999986 89887542 1 34689999998885 5668776775
Q ss_pred CCCCCCCCHHHHhcccCCcEEEec-----CCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHH
Q 007782 447 PTSQSECTAEEAYTWSKGRAIFAS-----GSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEA 521 (590)
Q Consensus 447 Pt~~aEctpedA~~wt~G~aifAs-----GSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~a 521 (590)
-.---|-.-.+|+ .+|+..-|. .=|.+ +.. .. + +|..+-|=++--... --..|...+++.
T Consensus 209 G~vvd~~aL~~aL--~~g~i~~A~LDV~~~EP~~----~~~-l~--~-~nvi~TPHiag~t~e-----~~~~~~~~~~~n 273 (380)
T 2o4c_A 209 GAVVDNQALRRLL--EGGADLEVALDVWEGEPQA----DPE-LA--A-RCLIATPHIAGYSLE-----GKLRGTAQIYQA 273 (380)
T ss_dssp GGGBCHHHHHHHH--HTTCCEEEEESCCTTTTSC----CHH-HH--T-TCSEECSSCTTCCHH-----HHHHHHHHHHHH
T ss_pred CcccCHHHHHHHH--HhCCCceEEeeeeccCCCC----chh-hc--c-CCEEEccccCcCCHH-----HHHHHHHHHHHH
Confidence 2211121122333 345533331 11211 111 11 1 478888877632111 123455556666
Q ss_pred HHcccCcc
Q 007782 522 LAKQVTEE 529 (590)
Q Consensus 522 LA~~v~~~ 529 (590)
+......+
T Consensus 274 l~~~l~g~ 281 (380)
T 2o4c_A 274 YCAWRGIA 281 (380)
T ss_dssp HHHHHTCC
T ss_pred HHHHHcCC
Confidence 66665533
No 62
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.62 E-value=0.15 Score=51.28 Aligned_cols=98 Identities=18% Similarity=0.234 Sum_probs=59.9
Q ss_pred HHHHHHHHHH-hcCCCeeeeeecCCCchHHHHHHHHc---------CCCceeccC-CCchHHHHHHHHHHH-HHHhCCCC
Q 007782 261 LDEFMSAVKQ-NYGEKVLIQFEDFANHNAFELLAKYG---------TTHLVFNDD-IQGTASVVLAGVVAA-LKLIGGTL 328 (590)
Q Consensus 261 idefv~av~~-~fGp~~lIqfEDf~~~~Af~lL~ryr---------~~~~~FNDD-iQGTaaV~LAgll~A-~r~~g~~l 328 (590)
+.++++.++. .|+. ++.--=-...+++++|+.. +.+ ++.|+ ..|.-.= -.|++.+ ++..|.++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv-~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l 118 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANAL-KFEDGRIVAENFD-GIGLLRDIEENLGEPL 118 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEE-EEETTEEEEECCH-HHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceE-EccCCeEEEecCC-HHHHHHHHHHHcCCCc
Confidence 5677776653 4533 3332222334555555432 122 33333 3442222 3578888 88888899
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++.+++|+|||.+|.+++..|.+ .|. ++|+++++.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 99999999999777777766654 364 678888774
No 63
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.47 E-value=0.75 Score=50.48 Aligned_cols=179 Identities=19% Similarity=0.234 Sum_probs=117.1
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCCchHH--HHHHHHcC---CC------ceeccCC---------Cch
Q 007782 252 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNAF--ELLAKYGT---TH------LVFNDDI---------QGT 309 (590)
Q Consensus 252 ~~g~~Y~~~idefv~av~~--~fGp~~lIqfEDf~~~~Af--~lL~ryr~---~~------~~FNDDi---------QGT 309 (590)
.+..|-..|.-.||+.+.+ ..||..-|-=+|++..-.. -+.+.|+. .. |+--.-+ .-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 3566778889999999985 7889999999999875321 26677742 11 1111111 224
Q ss_pred HHHHHHHHHH------HHHHhCC--CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCC
Q 007782 310 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 381 (590)
Q Consensus 310 aaV~LAgll~------A~r~~g~--~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R 381 (590)
|-=+.-++-. +++..|. +|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|++..
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4444444433 3456775 58999999999999999999998753 63 4466899999999764
Q ss_pred cCCCch-----hchhhccc--cCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC-CC
Q 007782 382 KDSLQH-----FKKPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 448 (590)
Q Consensus 382 ~~~l~~-----~k~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 448 (590)
.++. ++.....- -+....+.+.+-.++.||||=+..+ +..|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433 22221110 0000011113456789999988775 79999988877 5789999998 54
No 64
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.36 E-value=0.21 Score=50.26 Aligned_cols=49 Identities=33% Similarity=0.389 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|++.+++..|.++++.|+|++|||-|+-+|+-.|.+ .|. ++|+++++.
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nRt 158 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDPS 158 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCCC
Confidence 4677889989999999999999999999988877654 364 689998863
No 65
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.04 E-value=0.056 Score=54.71 Aligned_cols=104 Identities=17% Similarity=0.283 Sum_probs=60.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccC-CCCCHHHHhcccC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLDAVKVIK 410 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~-~~~~L~e~V~~vk 410 (590)
||.|+|||+.|.++|..++. .|+ ...++++|.+---......++.+.. +|..... ...+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 89999999999999987754 254 2479999986210000000011100 1111100 0023 356765
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 411 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 411 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||..
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD 120 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH
Confidence 8988865544422 12788888988888888878999983
No 66
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.02 E-value=0.14 Score=49.62 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=61.6
Q ss_pred hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc--cCCCcCCCc-hhchhhccc--cCC
Q 007782 324 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHE--HEP 398 (590)
Q Consensus 324 ~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv--~~~R~~~l~-~~k~~fA~~--~~~ 398 (590)
...++...||.|+|+|..|.++|..+... | .+++++|++-=- .+.....+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999988753 5 368888875211 000000000 001222221 112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHH-HcCCCCcEEEecCCCC
Q 007782 399 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 448 (590)
Q Consensus 399 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 448 (590)
..++.|+++. +|++| ++-.+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578899987 88887 333332 345666666 4333677999999974
No 67
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.99 E-value=1.2 Score=47.62 Aligned_cols=114 Identities=22% Similarity=0.256 Sum_probs=80.6
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHH---HHHHHc---CCC----ceeccC----------CCchHHH
Q 007782 253 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH----LVFNDD----------IQGTASV 312 (590)
Q Consensus 253 ~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~---lL~ryr---~~~----~~FNDD----------iQGTaaV 312 (590)
+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.|+ ... .++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456677889999999998899999999999873 222 334542 221 233322 1236666
Q ss_pred HHHHHHHHHHHhCCC-CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEE-cCCCccc
Q 007782 313 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIV 378 (590)
Q Consensus 313 ~LAgll~A~r~~g~~-l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lv-D~~GLv~ 378 (590)
+.-++-.+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++.+ |+.|-++
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 666778888999999 9999999999999999999988651 254 34444 8876544
No 68
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.94 E-value=0.27 Score=50.88 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=60.5
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc----cCCCCCH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 402 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~----~~~~~~L 402 (590)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+... .....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3788999999999999999888754 262 688888641 11 21111111110 0112357
Q ss_pred HHHhcccCCcEEEeccCCCC-----CCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 403 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 899999877553 46899999985 34566666643
No 69
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.80 E-value=0.31 Score=49.59 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=64.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhccc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~v 409 (590)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111101221 2111 0111466 67776
Q ss_pred CCcEEEeccCCC--CC-----------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 410 KPTILIGSSGVG--RT-----------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 410 kPtvLIG~S~~~--g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
.|++|=+.+.+ |- .-+++++.|.++++.-+|+-.|||..
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 89998655443 10 13578888889999999888999983
No 70
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=91.78 E-value=0.28 Score=47.95 Aligned_cols=81 Identities=25% Similarity=0.343 Sum_probs=54.8
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
.|++.+++..|.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .......|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887754 252 58888864 111 1122222211
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC
Q 007782 395 EHEPVNNLLDAVKVIKPTILIGSSGVG 421 (590)
Q Consensus 395 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 421 (590)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3467776 5 489999766644
No 71
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.73 E-value=0.22 Score=53.87 Aligned_cols=106 Identities=16% Similarity=0.280 Sum_probs=66.7
Q ss_pred CccceEEEeCcChH--HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc---ccCCCCCH
Q 007782 328 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 402 (590)
Q Consensus 328 l~d~riv~~GAGsA--g~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~---~~~~~~~L 402 (590)
.+..||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- ++-+.+....+.+.+ .-.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888742 122 2 3899999862 110000000001111 00112589
Q ss_pred HHHhcccCCcEEEeccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEecCC
Q 007782 403 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
.||++. +|.+|=.-.+| |. .-.++++.|.++++.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999987 89888433322 22 13577888889999999999999
Q ss_pred CC
Q 007782 447 PT 448 (590)
Q Consensus 447 Pt 448 (590)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 72
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=91.68 E-value=0.21 Score=50.46 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=63.8
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCcccCCCcCCCchhchhhccccCC-CCCHHHHhc
Q 007782 332 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVK 407 (590)
Q Consensus 332 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~R~~~l~~~k~~fA~~~~~-~~~L~e~V~ 407 (590)
||+|.| +|..|..++..|+. .|+ ...++|+|. +-=-.++-..+|.+... +.++..- ..+ .++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~-~~a~~ 69 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGG-YEDTA 69 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECC-GGGGT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCC-HHHhC
Confidence 899999 99999998887754 254 256999997 31000000001222111 1111000 023 56777
Q ss_pred ccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 408 VIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 408 ~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
. .|++|=+.+.+ |. .+++++++|.+++.+.+|+--|||.
T Consensus 70 ~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 70 G--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred C--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 6 89998666544 32 4677889999999999999999997
No 73
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=91.62 E-value=1 Score=47.68 Aligned_cols=120 Identities=10% Similarity=0.097 Sum_probs=86.6
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 297 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 297 ~~~~~FNDDi---QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|-.+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 4566666543 2345557999999999999999999999999999999999998643 65 5777776
Q ss_pred CCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----C----CCCCCCHHHHHHHHcCCCCcEEEecC
Q 007782 374 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----G----VGRTFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 374 ~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~----~~g~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.. . . .. ......+|.|+++. .|+++=.- . .-++|+++.++.|. +..|+.=.|
T Consensus 151 ~~----~--~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR----A--A-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH----H--H-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch----H--H-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 21 0 0 00 11234689999987 89887432 1 45689999999995 677888777
Q ss_pred CCC
Q 007782 446 NPT 448 (590)
Q Consensus 446 NPt 448 (590)
.-.
T Consensus 211 RG~ 213 (381)
T 3oet_A 211 RGP 213 (381)
T ss_dssp CGG
T ss_pred CCc
Confidence 633
No 74
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.59 E-value=0.27 Score=51.06 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=69.2
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
+|.+++..+. +....++.|+|+|..|..++..+... .++ ++++++|+. .++ ...+.+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 3455665553 24568999999999999988776543 233 678888874 121 3333333321
Q ss_pred c----cCCCCCHHHHhcccCCcEEEeccCCC---CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHH
Q 007782 395 E----HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAE 456 (590)
Q Consensus 395 ~----~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEctpe 456 (590)
. .....++.|+++. .|++|=++..+ .+|..+.+ .+.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l------~~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDML------EPGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGC------CTTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHc------CCCCEEEECCCCCCC-ceeeCHH
Confidence 0 1224689999986 89998666543 23443322 23447777775 55 6777664
No 75
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=91.52 E-value=1.8 Score=44.06 Aligned_cols=121 Identities=15% Similarity=0.100 Sum_probs=81.4
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH----------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhc
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 357 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~ 357 (590)
..+.+.|----. +|=-+++.+|+..|- .+..+.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 456677654323 333478888888775 36789999999999999999999988642
Q ss_pred CCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHH
Q 007782 358 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 433 (590)
Q Consensus 358 G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma 433 (590)
|+ +++.+|+.. + . . ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 578887641 1 0 0 011 11 0111378899886 898885432 34678899999885
Q ss_pred cCCCCcEEEecCC
Q 007782 434 SFNEKPLILALSN 446 (590)
Q Consensus 434 ~~~erPIIFaLSN 446 (590)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887777
No 76
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.41 E-value=1.3 Score=48.32 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=75.7
Q ss_pred HHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCC
Q 007782 322 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 400 (590)
Q Consensus 322 r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~ 400 (590)
|.++..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 456778999999999999999999988754 262 688887641 11111211 11124
Q ss_pred CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007782 401 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 460 (590)
Q Consensus 401 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~ 460 (590)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 89999998888899999999985 566777777755 3666555443
No 77
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.25 E-value=0.24 Score=50.59 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=66.7
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC--Ccc--cCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~--GLv--~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.||+|.|| |..|..++..|+. .|+-...-...++++|.+ .-- ..+...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 9999998887754 244111112479999975 100 0000000211101222221222578899
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
++. .|++|=+.+.+.. .++++++.+.+++ .+.+|+=.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 987 8988855554421 3567888999986 787777789997
No 78
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.19 E-value=0.27 Score=53.47 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=73.7
Q ss_pred cceEEEeCcChHH--HHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-c--ccCC---CCC
Q 007782 330 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 401 (590)
Q Consensus 330 d~riv~~GAGsAg--~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~--~~~~---~~~ 401 (590)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++-+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999965 4446666531 122 236799999863 21110111111111 1 0011 247
Q ss_pred HHHHhcccCCcEEEeccCCC---------------CCCC-------------------------HHHHHHHHcCCCCcEE
Q 007782 402 LLDAVKVIKPTILIGSSGVG---------------RTFT-------------------------KEVIEAMASFNEKPLI 441 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~---------------g~Ft-------------------------~evv~~Ma~~~erPII 441 (590)
+.++++. .|++|=+.+++ |.|. +++++.|.++|+.-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8889987 89888555321 3333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhcccCCcEEEecC
Q 007782 442 LALSNPTSQSECTAEEAYTWSKGRAIFASG 471 (590)
Q Consensus 442 FaLSNPt~~aEctpedA~~wt~G~aifAsG 471 (590)
+-.|||. . +..+-+.++..-| +|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCSE-EEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCCCCc-EEecC
Confidence 9999998 2 3333444454444 55543
No 79
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.15 E-value=0.37 Score=48.93 Aligned_cols=98 Identities=16% Similarity=0.354 Sum_probs=61.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch------hhcccc-CCCCCHHH
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK------PWAHEH-EPVNNLLD 404 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~------~fA~~~-~~~~~L~e 404 (590)
||.|+|||+.|.++|..++.. |. .+.++++|.+- ++ +..... ++.... -...+ .+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~---~~~~~~~l~~~~~~~~~~~i~~~d-~~ 63 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KR---AEGDALDLIHGTPFTRRANIYAGD-YA 63 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HH---HHHHHHHHHHHGGGSCCCEEEECC-GG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HH---HHHHHHHHHhhhhhcCCcEEEeCC-HH
Confidence 799999999999999887653 54 24799999851 11 111111 111000 00123 35
Q ss_pred HhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 405 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
+++. .|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 64 ~~~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 64 DLKG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp GGTT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HhCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 5654 8888855444431 12688888988888878888999984
No 80
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.03 E-value=0.35 Score=47.79 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.|++.+++..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888777776542 5 368888774
No 81
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.01 E-value=0.23 Score=48.98 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=32.4
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46788999999999999999988764 76 789999987
No 82
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.93 E-value=0.38 Score=43.00 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=53.0
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc-hhchhhcc-ccCCCCCHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 403 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 403 (590)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 34567899999999999999988854 25 3688898752 1111121 11111111 100111233
Q ss_pred HH-hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 404 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 404 e~-V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
++ ++ ++|++|-+.+.. ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 33 489998776643 233344443333355555555554
No 83
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.84 E-value=0.11 Score=52.74 Aligned_cols=105 Identities=17% Similarity=0.272 Sum_probs=63.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC-CCHHHHhccc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~-~~L~e~V~~v 409 (590)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+....++.+. .++....... .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5999999999999999766542 54 257999998621111000012111 1111100000 133567776
Q ss_pred CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 410 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 410 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+.. .-+++++.|.++++.-++|=.|||-
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 8998855544431 2357788888888888888899997
No 84
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.79 E-value=0.18 Score=51.73 Aligned_cols=128 Identities=16% Similarity=0.238 Sum_probs=71.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 408 (590)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=..+....++.+...++.... ....++ ++++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 5899999999999999877642 64 1399999862100000001111111111110 011456 77876
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 007782 409 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 472 (590)
Q Consensus 409 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt--~G~aifAsGS 472 (590)
.|++|=+.+.+ |. .-+++.+.+.++++.-+|+=-|||.+- . .+-+.+.+ .-.-+|++|+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~--~-t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA--M-VYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH--H-HHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH--H-HHHHHHhcCCChhhEEEeCc
Confidence 89888554333 21 245778888888888787667999842 2 33333322 1233566665
Q ss_pred CCC
Q 007782 473 PFD 475 (590)
Q Consensus 473 PF~ 475 (590)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 85
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.71 E-value=2 Score=43.81 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=85.4
Q ss_pred eeeecCCCchHHHHHHHHcCCCceeccCCCch---HHHHHHHHHHHHHHh---------------------CCCCccceE
Q 007782 278 IQFEDFANHNAFELLAKYGTTHLVFNDDIQGT---ASVVLAGVVAALKLI---------------------GGTLAEHRF 333 (590)
Q Consensus 278 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGT---aaV~LAgll~A~r~~---------------------g~~l~d~ri 333 (590)
|+.-..+..|- ++-.--+..+.+.|----.+ |=-+++.+|+..|-. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 55555555442 22111235677877643333 344788888887622 356889999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 007782 334 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 413 (590)
Q Consensus 334 v~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 413 (590)
.|+|.|..|..+|+.+.. .|. +++.+|+.. .+ ....+ .+ .... .++.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCE
Confidence 999999999999998753 263 588888641 11 11111 11 0011 278888876 898
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 414 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 414 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
+|=.-. ..++++++.++.|. +..++.-.|.
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874421 24578888888884 4567765555
No 86
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=90.59 E-value=0.21 Score=51.31 Aligned_cols=105 Identities=15% Similarity=0.270 Sum_probs=64.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|||+.|..++-+|+.. ++ -..++|+|.+-=-.++...+|.+. .+|.++..-..+-.++++.
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~-- 76 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD-- 76 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6899999999999988877442 44 268999998410000000012211 1232211000134677877
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 411 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 411 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 8999866555432 1245677778889999999999998
No 87
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.57 E-value=0.29 Score=48.54 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.|++.+++..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888888777542 4 468888874
No 88
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.55 E-value=0.97 Score=46.17 Aligned_cols=111 Identities=16% Similarity=0.170 Sum_probs=70.8
Q ss_pred HHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc--
Q 007782 317 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-- 394 (590)
Q Consensus 317 ll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-- 394 (590)
.+++-.+..+ ...+++|+|+|..|-.+++.+... .++ ++|+++|+. + ...+...+..
T Consensus 110 ~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~---a~~la~~l~~~~ 168 (313)
T 3hdj_A 110 VLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------A---SPEILERIGRRC 168 (313)
T ss_dssp HHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------C---CHHHHHHHHHHH
T ss_pred HHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------H---HHHHHHHHHHhc
Confidence 3444444433 457999999999998888877543 233 789999987 2 1222222221
Q ss_pred --ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCHHHH
Q 007782 395 --EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 458 (590)
Q Consensus 395 --~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEctpedA 458 (590)
+.... ++.|+++. .|++|-++... .+|..+.+ .+..+|..++. |. +-|+.++-.
T Consensus 169 g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 169 GVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp TSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 11223 89999987 99999765433 35554433 36778888875 44 588888754
No 89
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.54 E-value=0.24 Score=50.68 Aligned_cols=102 Identities=17% Similarity=0.234 Sum_probs=64.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhcccc--CCCCCHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 404 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~----~l~~~k~~fA~~~--~~~~~L~e 404 (590)
.||.|+|||+.|.++|.+++.. |+- +++|+|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~~------~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NLG------DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TCC------EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCC------eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888753 651 29999975 22110 1111111111110 011466 7
Q ss_pred HhcccCCcEEEeccCCC---CC----------------CCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007782 405 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQ 450 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~ 450 (590)
+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||...
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV 131 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH
Confidence 7876 89988554333 31 356788888888988887777999843
No 90
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=90.33 E-value=0.26 Score=50.46 Aligned_cols=105 Identities=12% Similarity=0.226 Sum_probs=63.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++-..+|.+.. +|.++..-..+..++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 6999999999999988876543 44 2689999984100000000122211 232211000134677776
Q ss_pred CcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 411 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 411 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+.. .-+++++.|.++++.-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8999855554421 2245777788899999999999998
No 91
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.26 E-value=3.4 Score=42.29 Aligned_cols=121 Identities=14% Similarity=0.144 Sum_probs=77.0
Q ss_pred CCCceeccCCCch---HHHHHHHHHHHHHH-------------------------hCCCCccceEEEeCcChHHHHHHHH
Q 007782 297 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------------IGGTLAEHRFLFLGAGEAGTGIAEL 348 (590)
Q Consensus 297 ~~~~~FNDDiQGT---aaV~LAgll~A~r~-------------------------~g~~l~d~riv~~GAGsAg~GIA~l 348 (590)
..+.+.|----.+ |=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 4566666543333 33367777777662 1457889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc-C---CCCCC
Q 007782 349 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS-G---VGRTF 424 (590)
Q Consensus 349 i~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S-~---~~g~F 424 (590)
+... |. +++.+|+.. +. ... ..+ .-...+|.++++. .|+++=.- . ..+++
T Consensus 169 l~~~-----G~-------~V~~~d~~~----~~----~~~-~~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKGF-----NM-------RILYYSRTR----KE----EVE-REL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHHT-----TC-------EEEEECSSC----CH----HHH-HHH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHhC-----CC-------EEEEECCCc----ch----hhH-hhc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 8642 63 688888642 10 100 111 0112478898886 88887432 2 23578
Q ss_pred CHHHHHHHHcCCCCcEEEecCC
Q 007782 425 TKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 425 t~evv~~Ma~~~erPIIFaLSN 446 (590)
+++.++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888884 5667776664
No 92
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.79 E-value=1.3 Score=43.65 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=55.9
Q ss_pred eeecCCCchHHHHHHHHcC------CCceeccCCCchHHHHHHHHHHHHHHh-CCCCccceEEEeC-cChHHHHHHHHHH
Q 007782 279 QFEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIA 350 (590)
Q Consensus 279 qfEDf~~~~Af~lL~ryr~------~~~~FNDDiQGTaaV~LAgll~A~r~~-g~~l~d~riv~~G-AGsAg~GIA~li~ 350 (590)
.++-+.-..+.+++++-+. ...+| .|..|.- .--.|++.+++.. +.++++.+++|.| +|.+|.+++..++
T Consensus 63 ~~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~ 140 (287)
T 1lu9_A 63 FVGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLA 140 (287)
T ss_dssp EEECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHH
T ss_pred EEccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 3454555577777777652 23344 4455532 2456777788777 7889999999999 8988888888876
Q ss_pred HHHHHhcCCChhhhcCcEEEEcCC
Q 007782 351 LEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 351 ~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+ .|. +++++|++
T Consensus 141 ~-----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 141 G-----EGA-------EVVLCGRK 152 (287)
T ss_dssp H-----TTC-------EEEEEESS
T ss_pred H-----CcC-------EEEEEECC
Confidence 4 263 38888875
No 93
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.72 E-value=0.37 Score=49.14 Aligned_cols=100 Identities=23% Similarity=0.381 Sum_probs=61.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhccccC-CCCCHHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHE-PVNNLLDA 405 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~----~l~~~k~~fA~~~~-~~~~L~e~ 405 (590)
.||.|+|||..|..+|-+++. .|+ -..++++|.+ .++-+ +|.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887654 254 2589999986 22211 011111 1211100 0123 566
Q ss_pred hcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++. .|++|=+.+.+..- -+++++.|.++++.-+|+=.|||-
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 776 89988555544211 168889999999999999999997
No 94
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.68 E-value=1.7 Score=41.59 Aligned_cols=92 Identities=11% Similarity=0.207 Sum_probs=60.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ + ...-..++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988653 420 01468888864 111 0 00112467788875
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
+|++| ++..+ -..+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 78776 33333 457888888876556668888888774
No 95
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=89.48 E-value=0.23 Score=42.48 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=52.6
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH-
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 405 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~- 405 (590)
++..+|+|+|+|..|..+++.+.. .| .+++++|++- ++.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999888754 25 2577888752 111111111001111 11111123332
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489998665532011233444444455556776666665
No 96
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.46 E-value=0.71 Score=46.64 Aligned_cols=100 Identities=21% Similarity=0.330 Sum_probs=60.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC----Cchhchhhcccc--CCCCCHHHH
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEH--EPVNNLLDA 405 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~----l~~~k~~fA~~~--~~~~~L~e~ 405 (590)
||.|+|||..|.++|..+... ++ -.+++++|.+- ++-+. +.+....+.... ....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887542 22 25799999862 21110 111000010010 01135655
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++. .|++|=+.+.+ |- .-+++++.|+++++.-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 665 88887554332 22 1157778888888888888899997
No 97
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.41 E-value=0.35 Score=49.98 Aligned_cols=107 Identities=15% Similarity=0.252 Sum_probs=66.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
...||.|+|||..|..+|..|+.. |+ .+.+.++|.+-=..++-.-+|.+. .+|.....-..+..++++.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~ 76 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD 76 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC
Confidence 346999999999999999888753 55 258999998411000000012222 1232211001233566776
Q ss_pred cCCcEEEeccCCC---C-----CC------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 409 IKPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+ | +| -+++++.|.++++.-+|+-.|||.
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv 128 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch
Confidence 88887454433 1 23 358888999999999999999998
No 98
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.41 E-value=0.4 Score=48.85 Aligned_cols=107 Identities=13% Similarity=0.250 Sum_probs=66.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-cccCCCCCHHHHhc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 407 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~~~~~~~~L~e~V~ 407 (590)
...||.|+|||..|..+|-.|+.. |+ -..++|+|.+-=..++...+|.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 446999999999999988876542 54 268999997520000100012222 2333 11000013467787
Q ss_pred ccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 408 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
. .|++|=+.+.+.. .=+++++.|.++++.-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 8999855555432 1246777788899999999999997
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.18 E-value=0.34 Score=46.91 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=61.0
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.++...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 2477787631 1122221111 00112467777
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
++. +|++|=+.. ... .+++++.+.... +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 888884333 323 388888887644 567888888854
No 100
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.08 E-value=0.22 Score=53.69 Aligned_cols=127 Identities=13% Similarity=0.193 Sum_probs=75.4
Q ss_pred ceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc--ccC-C---CCCHH
Q 007782 331 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--EHE-P---VNNLL 403 (590)
Q Consensus 331 ~riv~~GAGsA-g~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~--~~~-~---~~~L~ 403 (590)
.||.|+|||+. |.+++..|+.. ..++. -..++|+|.+-- +++.+.+......+.. ..+ . ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 367999998630 0111111111122211 001 1 24788
Q ss_pred HHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 404 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++++. .|++|=+.++++. .-+++++.|.++|+.-+|+-.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999866665431 13588899999999999999999982
Q ss_pred CCCCCHHHHhcccCCcEEEecC
Q 007782 450 QSECTAEEAYTWSKGRAIFASG 471 (590)
Q Consensus 450 ~aEctpedA~~wt~G~aifAsG 471 (590)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2333444555332466554
No 101
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.99 E-value=1.1 Score=46.47 Aligned_cols=38 Identities=24% Similarity=0.482 Sum_probs=33.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 457789999999999999999999876 76 789999986
No 102
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.76 E-value=0.42 Score=49.79 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=61.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc----cCCCCCH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 402 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~----~~~~~~L 402 (590)
.+.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999988764 262 588888741 11 22111112110 0012357
Q ss_pred HHHhcccCCcEEEeccCCC-----CCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 403 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
.+.++. .|++|.+.+.+ .+++++.++.|. +.-+|.=+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 788875 89999877554 357899998885 4456666663
No 103
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=88.46 E-value=2.5 Score=43.58 Aligned_cols=119 Identities=16% Similarity=0.231 Sum_probs=77.0
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH-------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 298 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 298 ~~~~FNDDiQ---GTaaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
.+.+.|---- .+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 110 gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~---- 185 (333)
T 3ba1_A 110 GVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA---- 185 (333)
T ss_dssp TCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT----
T ss_pred CcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH----
Confidence 4555554322 2333457777776553 2467899999999999999999998854
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 431 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 431 (590)
.|+ +++.+|+.. .. .. .+ ....+|.|+++. .|+++=.- ...++++++.++.
T Consensus 186 -~G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 186 -FDC-------PISYFSRSK----KP---NT----NY----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp -TTC-------CEEEECSSC----CT---TC----CS----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred -CCC-------EEEEECCCc----hh---cc----Cc----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhc
Confidence 263 588888652 11 11 01 112478898886 89887442 1246888899998
Q ss_pred HHcCCCCcEEEecCCCC
Q 007782 432 MASFNEKPLILALSNPT 448 (590)
Q Consensus 432 Ma~~~erPIIFaLSNPt 448 (590)
|. +..+|.-.|.-.
T Consensus 241 mk---~gailIn~srG~ 254 (333)
T 3ba1_A 241 LG---PKGVLINIGRGP 254 (333)
T ss_dssp HC---TTCEEEECSCGG
T ss_pred CC---CCCEEEECCCCc
Confidence 85 566777666643
No 104
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=88.29 E-value=1.5 Score=44.75 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=67.5
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
++.+++..+.. ....++.|+|+|..|-.+++.+... .++ ++++++|+. .++ ...+.+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3568999999999998888877653 233 678888874 222 2333333321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEeccCCC-CCCCHHHHHHHHcCCCCcEEEecC--CCCCCCCCCHH
Q 007782 395 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 456 (590)
Q Consensus 395 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~aEctpe 456 (590)
... ..++.|++ . .|++|=++..+ ..|..+.+ .+.-.|+.++ +|. +.|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46898988 4 89998665532 23443322 3556888883 455 6777764
No 105
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.29 E-value=3 Score=43.35 Aligned_cols=190 Identities=16% Similarity=0.137 Sum_probs=111.4
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH---------------------hCCCCccceEEEeCcChHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQ---GTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 297 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~ 352 (590)
..+++.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 45666665322 3455578888887763 25678999999999999999999998642
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHH
Q 007782 353 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 428 (590)
Q Consensus 353 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~ev 428 (590)
|+ +++.+|+... . ... +.......+|.|+++. .|+++=.-- .-++|+++.
T Consensus 196 -----G~-------~V~~~dr~~~------~-~~~-----~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL------S-HAL-----EEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC------C-HHH-----HTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc------c-hhh-----hcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 64 6788887521 0 110 1111123589999986 898884432 237899999
Q ss_pred HHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCC-C--CcceeCCeeeCcCCCcccccchhhhHHHHHh
Q 007782 429 IEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-F--DPFEYNGKVFVPGQANNAYIFPGFGLGLVIS 505 (590)
Q Consensus 429 v~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSP-F--~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s 505 (590)
++.|. +..++.=.|.-..--|-.-.+|+ .+|+.-.| |-. | +| .. ...--+..|+.+-|=+|-...
T Consensus 250 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~gA-~LDVf~~EP-~~---~~pL~~~~nvilTPHia~~t~-- 317 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRGDLINDDALIEAL--RSKHLFAA-GLDVFANEP-AI---DPRYRSLDNIFLTPHIGSATH-- 317 (345)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEE-EESCCTTTT-SC---CTTGGGCTTEEECCSCTTCBH--
T ss_pred HhhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCceEE-EecCCCCCC-CC---CchHHhCCCEEEcCccCcCCH--
Confidence 99995 67788877763322222223333 34654322 211 1 11 00 011124568888887653211
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 007782 506 GAIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 506 ~a~~Itd~M~~aAA~aLA~~v~ 527 (590)
.-...|...+++-|.....
T Consensus 318 ---e~~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 318 ---ETRDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp ---HHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHc
Confidence 1224556666666665554
No 106
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.21 E-value=0.32 Score=52.74 Aligned_cols=126 Identities=17% Similarity=0.268 Sum_probs=75.6
Q ss_pred cceEEEeCcChH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-c-ccC-C---CCCH
Q 007782 330 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H-EHE-P---VNNL 402 (590)
Q Consensus 330 d~riv~~GAGsA-g~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~-~~~-~---~~~L 402 (590)
..||.|+|||+. +.++|..|+.. ..++. -..++|+|.+- ++.+.+......+. . ..+ . ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01442 36799999863 22111111111221 1 011 1 2478
Q ss_pred HHHhcccCCcEEEeccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 403 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.++++. .|++|=+.+.++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899987 9999866655321 1358889999999999999999998
Q ss_pred CCCCCCHHHHhcccCCcEEEecC
Q 007782 449 SQSECTAEEAYTWSKGRAIFASG 471 (590)
Q Consensus 449 ~~aEctpedA~~wt~G~aifAsG 471 (590)
. +..+-+++.+.-.-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 2333444544332456554
No 107
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.19 E-value=3.1 Score=43.25 Aligned_cols=174 Identities=15% Similarity=0.077 Sum_probs=102.1
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH--------------------hCCCCccceEEEeCcChHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 353 (590)
Q Consensus 297 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~ 353 (590)
..+.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 45666664322 2344567788877752 25679999999999999999999988642
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007782 354 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 429 (590)
Q Consensus 354 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 429 (590)
|+ +++.+|+... .....+.. ......+|.|+++. .|+++=.- ..-++|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~-------~~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM-------APELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC-------CHHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc-------CHHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 64 4777776421 01111110 11123589999987 89988331 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHH
Q 007782 430 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLG 501 (590)
Q Consensus 430 ~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGiglG 501 (590)
+.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.--=|++--. .... --+..|+.+-|=++-.
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~ 309 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGT 309 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGG
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCC
Confidence 9995 677888887743223333334443 46644333222211100 0000 1134578888876543
No 108
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.10 E-value=0.39 Score=48.83 Aligned_cols=104 Identities=20% Similarity=0.246 Sum_probs=64.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhccc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~v 409 (590)
||.|+|||..|.++|..|+.. |+ .+.+.++|.+-=..++-.-+|.+...+|-... ....+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999752111100001222211121110 00134 778887
Q ss_pred CCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 410 KPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 410 kPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+ |- | -+++++.|.++++.-+|+-.|||.
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv 121 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence 89887444443 32 1 246778888999999999999998
No 109
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=88.00 E-value=4.3 Score=43.40 Aligned_cols=193 Identities=13% Similarity=0.186 Sum_probs=117.5
Q ss_pred cCCCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHH
Q 007782 296 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 354 (590)
Q Consensus 296 r~~~~~FNDDiQ---GTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 354 (590)
+..+++||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 467888886433 3455578888888763 25678999999999999999999987543
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007782 355 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 430 (590)
Q Consensus 355 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 430 (590)
|+ +++.+|+.. + .... -+ ....+|.|+++. .|+++=.- ..-+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~-----~---~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSD-----K---LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTC-----C---CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcc-----h---hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 64 688888741 1 1100 01 124689999987 89887432 123689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCC-CC--cceeCCeeeCc-CCCcccccchhhhHHHHHhC
Q 007782 431 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSP-FD--PFEYNGKVFVP-GQANNAYIFPGFGLGLVISG 506 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSP-F~--pv~~~G~~~~p-~Q~NN~yiFPGiglG~l~s~ 506 (590)
.|. +..++.=.|.-..--|---.+|++ +|+.- +.|.. |+ |..-+.....| -+..|+.+-|=+|-...-+
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL~--~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea- 305 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVLQ--EGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEA- 305 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHHH--TTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHH-
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHHH--cCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHH-
Confidence 995 677888888754323333334443 56643 22222 21 11100000011 2457899999876432222
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007782 507 AIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 507 a~~Itd~M~~aAA~aLA~~v~ 527 (590)
-+.|...+++.|.+.+.
T Consensus 306 ----~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 306 ----QERIGTEVTRKLVEYSD 322 (416)
T ss_dssp ----HHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHh
Confidence 24566667777777664
No 110
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.98 E-value=0.56 Score=47.28 Aligned_cols=95 Identities=21% Similarity=0.317 Sum_probs=56.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----hcc----ccCCCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH----EHEPVNN 401 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~----fA~----~~~~~~~ 401 (590)
..||.|+|+|+.|..+|..|..+ | .+++++|+..= + .+..++. |-. ...-..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~---~~~l~~~g~~~~~~~~~~~~~~~~~ 74 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----I---VDLINVSHTSPYVEESKITVRATND 74 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----H---HHHHHHHSCBTTBTTCCCCSEEESC
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----H---HHHHHHhCCcccCCCCeeeEEEeCC
Confidence 47999999999999999998753 5 46888877411 0 1111110 000 0001135
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 450 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 450 (590)
+.| ++. .|++| ++-.+ ...+++++.++. +..+|..++|..+.
T Consensus 75 ~~~-~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 75 LEE-IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp GGG-CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred HHH-hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 556 553 67665 22222 567788777654 55678889987654
No 111
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.96 E-value=1.4 Score=44.42 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=57.7
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
.|++.+++..| +.|++|+|||.+|.+|+..|... | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 88999999999999988887653 4 478888775 23221122 1210
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCC----CCCCHHHHH-HHHcCCCCcEEEecC-CC
Q 007782 395 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 447 (590)
Q Consensus 395 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS-NP 447 (590)
......+| . ++|++|-++..+ -.+.++.+. .+. +..+++=++ ||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 11111222 1 689999776654 146777555 343 455776554 44
No 112
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=87.93 E-value=1.3 Score=44.70 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=64.3
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 394 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~ 394 (590)
++.+++..+. +....+|.|+|+|..|..++..+... .|+ ++++++|+. .+ ......+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~---~~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KE---NAEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HH---HHHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HH---HHHHHHHHhhC
Confidence 3445553332 44668999999999999998887653 243 578888763 11 12222222210
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCC-CCCCCHHHHHHHHcCCCCcEEEecCC--CCCCCCCCH
Q 007782 395 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 455 (590)
Q Consensus 395 ~~~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEctp 455 (590)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854332 2233331 1235568888743 53 355543
No 113
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.90 E-value=0.35 Score=48.20 Aligned_cols=102 Identities=14% Similarity=0.281 Sum_probs=61.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc-hhchhhcccc--CCCCCHHHHhc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAVK 407 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA~~~--~~~~~L~e~V~ 407 (590)
.||.|+|||+.|..+|..|... |. ..+++++|++---.+. ..++ .+..++..+. ....+. ++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 74 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EICR 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHhC
Confidence 5899999999999999887542 53 1479999986310000 0010 0111121110 000133 4555
Q ss_pred ccCCcEEEeccCCCCCCCH----------------HHHHHHHcCCCCcEEEecCCCCC
Q 007782 408 VIKPTILIGSSGVGRTFTK----------------EVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~Ft~----------------evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
. .|++|=+.+.+. ++ ++++.|+++++..+|+.++||..
T Consensus 75 ~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 75 D--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 4 888875554332 23 78888888888889999999984
No 114
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.88 E-value=0.61 Score=47.63 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=64.7
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh-hccccCCCCCHHHHhcc
Q 007782 331 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-WAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~-fA~~~~~~~~L~e~V~~ 408 (590)
.||+|.| +|..|..++..|+. .|+ ...++++|.+.- .+...+|.+...+ -.+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998887643 253 256999996421 0000001110000 00000011257788887
Q ss_pred cCCcEEEeccCCCC--------------CCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 409 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886655442 24677888888889889999999998
No 115
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.76 E-value=0.55 Score=47.92 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=34.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468999999999999999999999876 76 799999987
No 116
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=87.62 E-value=0.26 Score=50.16 Aligned_cols=104 Identities=18% Similarity=0.300 Sum_probs=62.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKP 411 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkP 411 (590)
||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.++...+|.+. .+|.++..-..+-.++++. .
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~--a 68 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG--A 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--E
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--C
Confidence 899999999999988876542 43 258999998620000000012211 1222110000122567776 8
Q ss_pred cEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 412 TILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 412 tvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
|++|=+.+.+ |. .-+++++.|.++++.-+|+-.|||.
T Consensus 69 D~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 69 RAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp EEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred CEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 9888554444 32 1246777788889999999999998
No 117
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=87.57 E-value=3 Score=42.25 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE
Q 007782 309 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 370 (590)
Q Consensus 309 TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~l 370 (590)
+|=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 344467777777662 34679999999999999999999988642 64 5888
Q ss_pred EcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 371 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 371 vD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
+|+.. +. ...+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.|.
T Consensus 171 ~d~~~-------~~-~~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 171 YDPYP-------NE-ERAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp ECSSC-------CH-HHHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred ECCCC-------Ch-hhHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 87641 10 1111 11 0112378898886 898885421 34688899999885 5668777776
No 118
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.40 E-value=1.1 Score=48.22 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=63.1
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 405 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 405 (590)
.++..+|.|+|+|..|..+|..|... |. +++++|+. . +..+...+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~---~~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----R---EKTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----H---HHHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----H---HHHHHHHhhCCCCCeEEeCCHHHH
Confidence 35667999999999999999998643 53 57777763 1 112222111100 01123578888
Q ss_pred hccc-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 406 VKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 406 V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
++.. +||++| ++-..+..++++++.+...- +.-||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 44444456788888887544 456888888865
No 119
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=87.28 E-value=0.76 Score=47.33 Aligned_cols=106 Identities=17% Similarity=0.326 Sum_probs=64.4
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC---CCHHH
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 404 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~---~~L~e 404 (590)
++..||.|+|||..|.++|.+|+.. |+ + .+.++|.+-=..++-..+|.+. ..|....... .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 4567999999999999999887653 65 2 5999998521110000012221 1122111111 244 7
Q ss_pred HhcccCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 405 AVKVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
+++. .|++|=+.+. +|. | -+++++.|.++++.-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 8876 8988755443 332 1 156777888899999999999997
No 120
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=87.24 E-value=4.4 Score=41.46 Aligned_cols=137 Identities=10% Similarity=0.092 Sum_probs=88.0
Q ss_pred eeeecCCCchHHHHHHHHcCCCceeccCCCch---HHHHHHHHHHHHHH-------------------hCCCCccceEEE
Q 007782 278 IQFEDFANHNAFELLAKYGTTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLF 335 (590)
Q Consensus 278 IqfEDf~~~~Af~lL~ryr~~~~~FNDDiQGT---aaV~LAgll~A~r~-------------------~g~~l~d~riv~ 335 (590)
|+.--.+..|- ++-.--+..+.+.|---..+ |=-+++.+|+..|- .|..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 55555554442 22111235677777543333 44478888887761 234688999999
Q ss_pred eCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEE
Q 007782 336 LGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILI 415 (590)
Q Consensus 336 ~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLI 415 (590)
+|.|..|..+|+.+... |+ +++.+|+.. .. . +. .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~~-----G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGM-----GA-------TVIGEDVFE----IK-G-IE----DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CC-S-CT----TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHHC-----CC-------EEEEECCCc----cH-H-HH----hccc----cCCHHHHHhh--CCEEE
Confidence 99999999999988642 64 588888752 11 1 11 1111 2378999986 89988
Q ss_pred ec----cCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 416 GS----SGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 416 G~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
=. ....++|+++.++.|. +..++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 63 1234689999999885 5678887874
No 121
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.24 E-value=0.5 Score=47.04 Aligned_cols=49 Identities=22% Similarity=0.261 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...|++.+++..+.++++.+++|+|||.+|.++|..+.. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666665532 12 68888874
No 122
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=87.21 E-value=0.71 Score=49.23 Aligned_cols=124 Identities=12% Similarity=0.169 Sum_probs=75.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHH-hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc---CCCCCHHHHh
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 406 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~-~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~---~~~~~L~e~V 406 (590)
.||.|+|||+. ++..++..+.+ ..++. -+.++|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 66655444443 23442 36799999752 22110011111111110 1125788999
Q ss_pred cccCCcEEEeccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEecCCCCCCCC
Q 007782 407 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 452 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~aE 452 (590)
+. .|++|=+.++++ ++ =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 87 999997777753 22 258999999999 99999999998 2
Q ss_pred CCHHHHhcccCCcEEEecC
Q 007782 453 CTAEEAYTWSKGRAIFASG 471 (590)
Q Consensus 453 ctpedA~~wt~G~aifAsG 471 (590)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2333444555332466554
No 123
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.19 E-value=0.69 Score=46.85 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=61.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 408 (590)
.||.|+|||..|.++|-.++. .|+ . + ++++|.+-=-.++...+|.+...+..... ....++ ++++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 489999999999999997754 254 1 3 99999751000000001211111111110 001456 77776
Q ss_pred cCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 409 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+.. .-+++.+.+.++++.-+|+--|||.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 8998865544421 1246788888888888888789998
No 124
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.16 E-value=0.85 Score=45.80 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=58.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC--------cccCCCcCCCchhchhhccccCCCCCH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 402 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G--------Lv~~~R~~~l~~~k~~fA~~~~~~~~L 402 (590)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ ....++ + +...-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 5 4688888753 111110 000000 0 000111355
Q ss_pred HHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007782 403 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 449 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 449 (590)
.++.+ .+|++| ++... ..++++++.++..- +..+|+.+.|--.
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 55543 378777 44444 34678999987543 4568888999764
No 125
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.00 E-value=2.6 Score=43.86 Aligned_cols=144 Identities=13% Similarity=0.160 Sum_probs=89.7
Q ss_pred eeeecCCCchH-HHHHHHHcCCCceeccCCC---chHHHHHHHHHHHHHH--------------------hCCCCccceE
Q 007782 278 IQFEDFANHNA-FELLAKYGTTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRF 333 (590)
Q Consensus 278 IqfEDf~~~~A-f~lL~ryr~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~ri 333 (590)
|+.-..+..|- .+.+.+.+..+.+.|---- .+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 66665555553 2333333335777764322 2344468888887762 3678999999
Q ss_pred EEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcE
Q 007782 334 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 413 (590)
Q Consensus 334 v~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtv 413 (590)
.|+|.|..|..+|+.+.. .|+ ++++.+|+... .....+ .+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CCE
Confidence 999999999999998853 264 23787876421 111111 11 00112478898885 899
Q ss_pred EEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 414 LIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 414 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
++=.-- ..++|+++.+..|. +.-+|.-.|.-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 885432 22688998888885 56788878773
No 126
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.99 E-value=1.9 Score=44.73 Aligned_cols=95 Identities=11% Similarity=0.220 Sum_probs=60.7
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHh
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 406 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V 406 (590)
++..||.|+|.|..|..+|..|... | -+++++|+. . +.+. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~---~~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----V---NAVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----H---HHHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----H---HHHH----HHHHCCCEEeCCHHHHH
Confidence 3567999999999999999988753 5 357777763 1 1111 12211 12346788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCC
Q 007782 407 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNP 447 (590)
Q Consensus 407 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNP 447 (590)
+.. +||++| ++-..+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 764 568877 333333 678888887654 356688877773
No 127
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.94 E-value=0.44 Score=49.82 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 57889999999999999999999875 76 7999999873
No 128
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.87 E-value=0.68 Score=44.09 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=57.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~l-vD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+-- ....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g~--~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFGA--SVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHTT--TEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhCC--CcccChHHHHhc-
Confidence 5899999999999999988653 53 3554 5543 1223322222211 111244566765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
+|++| ++. +....+++++.++. .+..+|+.+|||..
T Consensus 82 -aDvVi-lav-p~~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAV-PYDSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EES-CGGGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeC-ChHHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 78877 333 23456778877765 45669999999874
No 129
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.82 E-value=1.2 Score=42.90 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=59.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988753 531 12478888774 1 1122222221 11223578899886
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 449 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 449 (590)
+|++| ++..+ --.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 88887 33333 45678888776543 4568877777664
No 130
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.74 E-value=7.7 Score=41.05 Aligned_cols=191 Identities=16% Similarity=0.139 Sum_probs=109.1
Q ss_pred cCCCceeccCCCc---hHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHH
Q 007782 296 GTTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 354 (590)
Q Consensus 296 r~~~~~FNDDiQG---TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 354 (590)
+..+++||----. +|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~-- 167 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL-- 167 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC--
Confidence 3568888865433 444578888888763 25679999999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007782 355 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 430 (590)
Q Consensus 355 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 430 (590)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ..-++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 168 ---GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp ---TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred ---CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 64 5788887421 1010 01 123478898887 88887432 233688999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEE------EecCCCCCcceeCCeeeCcCCCcccccchhhhHHHHH
Q 007782 431 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 504 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~ai------fAsGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~ 504 (590)
.|. +.-++.=.|.=.---|---.+|++ +|+.- |.. -|.++=+.-. ..--+..|+.+-|=+|-...-
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDVf~~-EP~~~~~~~~--~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADALA--SKHLAGAAIDVFPT-EPATNSDPFT--SPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHHH--TTSEEEEEEEC----------CTTT--GGGTTCTTEEEECCCSCCSHH
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHHH--cCCccEEEEeecCC-CCCCcccccc--chhhcCCCEEECCCCCCCcHH
Confidence 885 566887777532111211223333 45432 222 2221000000 001134688888877632222
Q ss_pred hCCcccCHHHHHHHHHHHHcccC
Q 007782 505 SGAIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 505 s~a~~Itd~M~~aAA~aLA~~v~ 527 (590)
+ -+.|...+++.|.+...
T Consensus 294 a-----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 A-----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp H-----HHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHc
Confidence 1 23455566666666654
No 131
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.66 E-value=0.61 Score=41.14 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|+|+|||.||+-.|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 499999999999999988753 75 47778864
No 132
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=86.57 E-value=7.2 Score=39.47 Aligned_cols=117 Identities=18% Similarity=0.194 Sum_probs=78.5
Q ss_pred CCCceeccCCCchHH---HHHHHHHHHHHHh-----------------CCCCccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007782 297 TTHLVFNDDIQGTAS---VVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 356 (590)
Q Consensus 297 ~~~~~FNDDiQGTaa---V~LAgll~A~r~~-----------------g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~ 356 (590)
..+++.|----.+.+ -+++.+|+..|-. +..|.+.++.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 457777743222334 4788888876631 2368899999999999999999988642
Q ss_pred cCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 007782 357 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 432 (590)
Q Consensus 357 ~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~M 432 (590)
|+ +++.+|+..- +. . .....+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 147 -G~-------~V~~~dr~~~---------~~---~----~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK---------EG---P----WRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp -TC-------EEEEECSSCC---------CS---S----SCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCcc---------cc---C----cccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 64 5788886532 00 0 1123478888876 88887542 23457888888887
Q ss_pred HcCCCCcEEEecCC
Q 007782 433 ASFNEKPLILALSN 446 (590)
Q Consensus 433 a~~~erPIIFaLSN 446 (590)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678887776
No 133
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.52 E-value=0.91 Score=45.45 Aligned_cols=48 Identities=8% Similarity=0.155 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666777766654 56899999999999999888754 364 679988774
No 134
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.50 E-value=1.1 Score=44.48 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=56.6
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CCcccCCCcCCCchhchhhc--------cccCCCC-
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWA--------HEHEPVN- 400 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~--~GLv~~~R~~~l~~~k~~fA--------~~~~~~~- 400 (590)
||.|+|+|..|..+|..+... | .+++++|+ +.= .++..++... ....-..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988653 5 36888887 311 0111111000 0000112
Q ss_pred -CHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 401 -NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 401 -~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++.|+++. +|++|= +... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 57777764 787763 3322 26788888876533456888888865
No 135
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=86.45 E-value=0.43 Score=48.97 Aligned_cols=104 Identities=20% Similarity=0.290 Sum_probs=63.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHhccc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V~~v 409 (590)
||.|+|||..|.++|..++.. |+ .+.+.++|.+-=..++-.-+|.+. ..+....... .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988754 54 258999998531111000012221 1121100011 245677876
Q ss_pred CCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 410 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 410 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+ |- .-+++++.+.++++..+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88887444433 31 1256777888999999999999997
No 136
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=86.35 E-value=5 Score=40.76 Aligned_cols=117 Identities=18% Similarity=0.166 Sum_probs=79.7
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHHh---------------------CCCCccceEEEeCcChHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~~---------------------g~~l~d~riv~~GAGsAg~GIA~li~~~ 352 (590)
..+.+.|----. +|=-+++.+|+..|-. |..+.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 456777654323 3334678888776531 4578899999999999999999988642
Q ss_pred HHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHH
Q 007782 353 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 428 (590)
Q Consensus 353 ~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 428 (590)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 64 588888642 11 11 1 13578898886 89888552 2346788888
Q ss_pred HHHHHcCCCCcEEEecCCC
Q 007782 429 IEAMASFNEKPLILALSNP 447 (590)
Q Consensus 429 v~~Ma~~~erPIIFaLSNP 447 (590)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88774 67788888873
No 137
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.35 E-value=0.68 Score=47.03 Aligned_cols=99 Identities=17% Similarity=0.392 Sum_probs=62.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC----CCchhchhhcccc--CCCCCHHHH
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLDA 405 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~----~l~~~k~~fA~~~--~~~~~L~e~ 405 (590)
||.|+|||+.|.++|-.++.. |+ +.++|+|.+ .++-+ +|.+...++.... ....+. ++
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a 64 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAAAELGVDIRISGSNSY-ED 64 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GG
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HH
Confidence 689999999999999777542 54 379999986 22210 1211110111110 001355 67
Q ss_pred hcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 406 VKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++. .|++|=+.+.+.. .-+++++.|.++++.-+|+=.|||.
T Consensus 65 ~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 65 MRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 776 9999866555431 1357888888888888777789998
No 138
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.16 E-value=0.46 Score=48.82 Aligned_cols=106 Identities=19% Similarity=0.273 Sum_probs=64.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCC--CCHHHHh
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 406 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~--~~L~e~V 406 (590)
+..||.|+|||..|.++|..|+. .|+ + .+.++|.+-=..++-..+|.+.. .+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~~~~~g~a~dL~~~~-~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQGMPNGKALDLLQTC-PIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHTTH-HHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCChHHHHHHHHHHHhhh-hhcCCCcEEEEcCCHHHH
Confidence 45799999999999999988765 265 2 69999986210000000122111 111111111 1224778
Q ss_pred cccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 407 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
+. .|++|=+.+.+ |. .-+++++.+.++++.-+|+-.|||.
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 76 89887554443 32 1256778888899888999999997
No 139
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.97 E-value=4.3 Score=41.55 Aligned_cols=91 Identities=15% Similarity=0.163 Sum_probs=60.5
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
..|.+.+|.|+|.|..|..+|+.+.. .|. +++.+|+.. .. ...+..-+. ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~----~~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV----NVEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH----HHHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch----hhhhhcCce----ecCHHHH
Confidence 68999999999999999999998753 253 688888641 10 111110011 1378888
Q ss_pred hcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 406 VKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 406 V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
++. .|+++=.-. ..++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 898874322 23578888888884 45 7766664
No 140
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.91 E-value=4.8 Score=41.76 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 007782 309 TASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 368 (590)
Q Consensus 309 TaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i 368 (590)
+|=-+++-+|+..|- .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 444567777777652 2467899999999999999999998853 264 57
Q ss_pred EEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEec
Q 007782 369 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILAL 444 (590)
Q Consensus 369 ~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaL 444 (590)
+.+|+.. .. . . .+ ....+|.|+++. .|+++=.- ..-++++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~-~-~-----~~----~~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS-G-V-----DW----IAHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT-T-S-----CC----EECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc-c-c-----Cc----eecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8788642 11 0 1 11 113589999986 89988432 224678899999885 56788878
Q ss_pred CCCCCCCCCCHHHHhc
Q 007782 445 SNPTSQSECTAEEAYT 460 (590)
Q Consensus 445 SNPt~~aEctpedA~~ 460 (590)
|.-..--|-.-.+|++
T Consensus 258 aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK 273 (340)
T ss_dssp SCC-------------
T ss_pred CCCcccCHHHHHHHHH
Confidence 7754334444444543
No 141
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.75 E-value=0.94 Score=46.73 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.||.|+|||..|.|||..++.+ |+ ++.++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 36899999999999999888764 75 57778753
No 142
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.73 E-value=0.67 Score=52.04 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.8
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|++.||+|+|||..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67789999999999999999999875 76 7999999873
No 143
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=85.66 E-value=2.8 Score=44.00 Aligned_cols=177 Identities=14% Similarity=0.063 Sum_probs=100.3
Q ss_pred hHHHHHHHHHHHHHH---------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCc
Q 007782 309 TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKK 367 (590)
Q Consensus 309 TaaV~LAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~ 367 (590)
+|=-+++-+|+..|- .+..|.+.++.|+|.|..|-.+|+.+.. .|+ +
T Consensus 134 vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~ 201 (365)
T 4hy3_A 134 VAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------R 201 (365)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------E
T ss_pred HHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------E
Confidence 444567777776652 2356889999999999999999998743 254 5
Q ss_pred EEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEe----ccCCCCCCCHHHHHHHHcCCCCcEEEe
Q 007782 368 ICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIG----SSGVGRTFTKEVIEAMASFNEKPLILA 443 (590)
Q Consensus 368 i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG----~S~~~g~Ft~evv~~Ma~~~erPIIFa 443 (590)
++.+|+.. . ....+. ..-...+|.|+++. .|+++= .....++|+++.++.|. +.-++.=
T Consensus 202 V~~~d~~~----~----~~~~~~----~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN 264 (365)
T 4hy3_A 202 IRVFDPWL----P----RSMLEE----NGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFIL 264 (365)
T ss_dssp EEEECSSS----C----HHHHHH----TTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEE
T ss_pred EEEECCCC----C----HHHHhh----cCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEE
Confidence 77777641 0 011111 11112479999986 899983 23345789999999995 6678887
Q ss_pred cCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeee----CcCCCcccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007782 444 LSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVF----VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAAS 519 (590)
Q Consensus 444 LSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~----~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA 519 (590)
.|.-..--|---.+|++ +|+.- | |- +|.- .... .--+..|+.+-|=+|-... .-...|...++
T Consensus 265 ~aRG~~vde~aL~~aL~--~g~i~-a-aL---DV~~-~EPl~~~~pL~~~~nvilTPHia~~t~-----e~~~~~~~~~~ 331 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVS--SGHIV-A-AS---DVYP-EEPLPLDHPVRSLKGFIRSAHRAGALD-----SAFKKMGDMVL 331 (365)
T ss_dssp CSCGGGSCHHHHHHHHH--TTSSE-E-EE---SCCS-SSSCCTTCGGGTCTTEEECCSCSSCCH-----HHHHHHHHHHH
T ss_pred CcCCchhCHHHHHHHHH--cCCce-E-Ee---eCCC-CCCCCCCChhhcCCCEEECCccccCHH-----HHHHHHHHHHH
Confidence 77643222322333433 56543 3 31 1110 0000 0124567888887653221 22345555666
Q ss_pred HHHHcccC
Q 007782 520 EALAKQVT 527 (590)
Q Consensus 520 ~aLA~~v~ 527 (590)
+-|.....
T Consensus 332 ~ni~~~~~ 339 (365)
T 4hy3_A 332 EDMDLMDR 339 (365)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 66666554
No 144
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.66 E-value=0.58 Score=48.01 Aligned_cols=107 Identities=17% Similarity=0.270 Sum_probs=66.6
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC--cccCCCcCCCchhchhhccccCCC--CCHH
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 403 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G--Lv~~~R~~~l~~~k~~fA~~~~~~--~~L~ 403 (590)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- =..++...+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 3457999999999999999988752 54 3789999861 1111111112221 2333211111 1224
Q ss_pred HHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 404 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++++. .|++|=+.+.+ |- .-+++++.++++++.-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 66766 89887554433 31 2257788888999999999999997
No 145
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.57 E-value=1.3 Score=48.01 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=58.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 408 (590)
.+|.|+|+|..|.++|..|+.. |. +++++|+.- +.++.... ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~-------~~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ-------SKVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS-------HHHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH-------HHHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 63 577777641 11111111 000 011123577787765
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 409 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 409 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
. +||++| ++-..+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 377766 34334345677777776543 345777787743
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.48 E-value=0.65 Score=45.60 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.6
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|++.||+|+|+|..|.-+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 45678999999999999999999865 75 7899999973
No 147
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=85.45 E-value=1.9 Score=40.82 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=49.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
..+...||.|+|+|..|..+|..+... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 346678999999999999999988653 5 368887753 11 2
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++ +.|++|= +.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 3566552 222 2345677777654333678888999653
No 148
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.93 E-value=2.3 Score=38.21 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=55.0
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 407 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 407 (590)
..+|+|.|| |-.|..+++.|++ .| .++++++++.- +...+...+..+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8788777777754 25 36888877521 10111011111111 2122235778887
Q ss_pred ccCCcEEEeccCCCCC---------CCHHHHHHHHcCCCCcEEEecC
Q 007782 408 VIKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
. +|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 5 8999987765431 1456666666544455665433
No 149
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.91 E-value=0.51 Score=48.66 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=65.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 408 (590)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.. ...-..+-.++++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 46899999999999999988753 54 258999997410000000013322 33321 10001122456765
Q ss_pred cCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 409 IKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+. +|- | -+++++.+.++++.-+|+-.|||.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv 125 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV 125 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH
Confidence 8887744443 332 1 257778888999999999999998
No 150
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=84.42 E-value=1.1 Score=45.43 Aligned_cols=102 Identities=19% Similarity=0.297 Sum_probs=64.2
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC--CC-cccCCCcCCCchhchhhcc-ccC--C-CCCHH
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KG-LIVSSRKDSLQHFKKPWAH-EHE--P-VNNLL 403 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~--~G-Lv~~~R~~~l~~~k~~fA~-~~~--~-~~~L~ 403 (590)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+ +.-..+|.+.. ++.. +.. . ..++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~-~~~~~dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKL-EGLREDIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHH-HHHHHHHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhh-HHHHHHHHHhH-HhcCCCeEEEeCCcchH
Confidence 8999999 9999998887753 254 256999997 31 00 00000122211 2221 100 0 01378
Q ss_pred HHhcccCCcEEEeccCCCC---C-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 404 DAVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g---~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
++++. .|++|=+.+.+. . .+++++++|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 88887 898886666542 2 3568888999999 99999999997
No 151
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=84.32 E-value=11 Score=39.21 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=81.6
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH----------h----------CCCCccceEEEeCcChHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 353 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~----------~----------g~~l~d~riv~~GAGsAg~GIA~li~~~~ 353 (590)
..+.+.|----. +|=-+++-+|+..|- . |..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367888764333 444568888877651 2 3467899999999999999999988643
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHH
Q 007782 354 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 429 (590)
Q Consensus 354 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv 429 (590)
|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.-- .-++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888752 1 0011 111 11389999987 899885432 3478999999
Q ss_pred HHHHcCCCCcEEEecCCCC
Q 007782 430 EAMASFNEKPLILALSNPT 448 (590)
Q Consensus 430 ~~Ma~~~erPIIFaLSNPt 448 (590)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9995 677888777633
No 152
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.16 E-value=1.5 Score=42.23 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=56.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc---hhhccccCCCCCHHHHhcc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k---~~fA~~~~~~~~L~e~V~~ 408 (590)
||.|+|+|..|..+|..+... | .+++++|+.- ++.+.+.... ..+ .......+ .++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~-~~~~~~~~-~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIF-NESLTAND-PDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEE-EEEEEESC-HHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCcee-eeeeeecC-ccccCC
Confidence 799999999999999988653 5 3688888752 1111111100 000 00001122 466664
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 409 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
.|++|= +.... ..+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888773 33232 3689999887643 456777789965
No 153
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.12 E-value=0.79 Score=51.33 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.7
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|++.||+|+|||..|..||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999999864 76 799999987
No 154
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.09 E-value=1.3 Score=48.07 Aligned_cols=36 Identities=6% Similarity=-0.145 Sum_probs=25.6
Q ss_pred CcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007782 485 VPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASE 520 (590)
Q Consensus 485 ~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~ 520 (590)
.||+.-|-.++|.+.=++.+....-++.+.+..|.+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 588888888889888777777333367776666643
No 155
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.99 E-value=0.91 Score=45.04 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|.+||..++.. |. +++++|++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 53 68888874
No 156
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.91 E-value=1.1 Score=47.56 Aligned_cols=121 Identities=23% Similarity=0.268 Sum_probs=67.6
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
.++++||+|+|.|.+|+++|+++.+ .| -++...|.+-.-.....+.|.....++-..+. -.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~----~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH----PLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCC----CGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCC----hHHhh
Confidence 5678999999999999999888765 36 46888887521000000011111111111111 11122
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeC
Q 007782 407 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFV 485 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~ 485 (590)
+. .+|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|-.||| ||||-+
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTTT 126 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTTT 126 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHHH
Confidence 21 168888666665 34677776654 345665 22 333445567788889997 676543
No 157
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.88 E-value=2.8 Score=43.42 Aligned_cols=102 Identities=21% Similarity=0.181 Sum_probs=58.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccc----CCCc--CCCchhchhhccccCCCCCHH
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRK--DSLQHFKKPWAHEHEPVNNLL 403 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~----~~R~--~~l~~~k~~fA~~~~~~~~L~ 403 (590)
..||.|+|+|+-|..+|..+... | .+++++|++--.. +.+. ..++..+ +.....-..++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 36899999999999999988653 5 3577787741100 0000 0011110 000000124688
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007782 404 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 449 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 449 (590)
|+++. +|++| ++. +-.+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88875 77766 332 2236777888777544 4567777888553
No 158
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=83.75 E-value=12 Score=38.16 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=82.6
Q ss_pred cCCCceeccCCCch---HHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHH
Q 007782 296 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 354 (590)
Q Consensus 296 r~~~~~FNDDiQGT---aaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 354 (590)
+..+.+.|----.+ |=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35678887543333 33478888888762 23568899999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007782 355 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 430 (590)
Q Consensus 355 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 430 (590)
|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 588888642 1 1 1 1 11221 12378898886 888885422 23678899999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007782 431 AMASFNEKPLILALSNPT 448 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSNPt 448 (590)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 885 567888777743
No 159
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=83.67 E-value=8.7 Score=39.53 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=63.4
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- .....+. + ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~-------~~~~~~~-~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA-------DAETEKA-L--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC-------CHHHHHH-H--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc-------chhhHhh-c--CcEEeCCHHH
Confidence 5679999999999999999999988522 263 6888886421 1111110 1 0011247888
Q ss_pred HhcccCCcEEEeccC----CCCCCCHHHHHHHHcCCCCcEEEecCCC
Q 007782 405 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 447 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 447 (590)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 898874421 23688888988884 55677766653
No 160
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=83.59 E-value=1.2 Score=46.62 Aligned_cols=96 Identities=20% Similarity=0.322 Sum_probs=53.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-----------ccCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 399 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-----------~~~~~ 399 (590)
.||+|+|||-.|..+|+.|++ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998666666665543 231 01368888874 111 2222222211 11122
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 400 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 400 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
.++.++++..++|++|=+++. .+..+++++..+.. .++| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888988899999977653 24566776654433 3444 2544
No 161
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=83.39 E-value=2.6 Score=43.42 Aligned_cols=187 Identities=15% Similarity=0.098 Sum_probs=108.1
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH----------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcC
Q 007782 298 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 358 (590)
Q Consensus 298 ~~~~FNDDiQ---GTaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G 358 (590)
.+.+.|---- .+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4666664322 2344467777777663 35689999999999999999999998643 6
Q ss_pred CChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEec----cCCCCCCCHHHHHHHHc
Q 007782 359 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS----SGVGRTFTKEVIEAMAS 434 (590)
Q Consensus 359 ~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~ 434 (590)
+ +++.+|+.. +. ..... . .....+|.|+++. .|+++=. ...-++|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~---~~----~~~~~----~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG---RE----RAGFD----Q-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC---CC----CTTCS----E-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh---HH----hhhhh----c-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888764 11 11111 1 1123578888876 8888743 1224678888887774
Q ss_pred CCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhCCcc
Q 007782 435 FNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIR 509 (590)
Q Consensus 435 ~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifA-----sGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~ 509 (590)
+..++.=.|.-..--|---.+|++ +|+.-.| ..-|.++- . .--+..|+.+-|=++- .+.
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t~ 285 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTALR--TGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YSF 285 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHHH--TTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CCC
T ss_pred --CCcEEEECCCchhhCHHHHHHHHH--cCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------ccH
Confidence 667887777633222222233332 3442111 11122110 0 0113567888887652 222
Q ss_pred cCHHHHHHHHHHHHcccCc
Q 007782 510 VHDDMLLAASEALAKQVTE 528 (590)
Q Consensus 510 Itd~M~~aAA~aLA~~v~~ 528 (590)
...|...+++-|.....-
T Consensus 286 -~~~~~~~~~~nl~~~~~G 303 (324)
T 3hg7_A 286 -PDDVAQIFVRNYIRFIDG 303 (324)
T ss_dssp -HHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHHHHcC
Confidence 256777777777776653
No 162
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=83.15 E-value=0.73 Score=46.54 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=65.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc---ccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL---v~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
.||+|.|| |..|.-++..|+. .|.--..-...++++|...- ...... ++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999888754 24310000137999997420 000000 12111112322222224688888
Q ss_pred cccCCcEEEeccCCCCC--------------CCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 407 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977665532 3556788888876 666888899996
No 163
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=82.64 E-value=3.9 Score=42.07 Aligned_cols=189 Identities=15% Similarity=0.241 Sum_probs=111.4
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 297 ~~~~~FNDDi---QGTaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|-.+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 5677777643 22344467777777642 26679999999999999999999988643
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 431 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 431 (590)
|+ +++.+|+..- . .+.....+ ...+|.|+++. .|+++=.- ..-++|+++.+..
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6788887521 1 11111111 12468888886 88888431 2246899999998
Q ss_pred HHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCcceeCCeeeCcCCCcccccchhhhHHHHHhC
Q 007782 432 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISG 506 (590)
Q Consensus 432 Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifA-----sGSPF~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~ 506 (590)
|. +..++.=.|.-..--|-.-.+|++ +|+.-.| ..-|.++ +. .-=+..|+.+-|=+|- .
T Consensus 217 mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~-----~ 280 (324)
T 3evt_A 217 TK---QQPMLINIGRGPAVDTTALMTALD--HHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISG-----Q 280 (324)
T ss_dssp CC---SCCEEEECSCGGGBCHHHHHHHHH--TTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTT-----C
T ss_pred CC---CCCEEEEcCCChhhhHHHHHHHHH--hCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCcccc-----C
Confidence 85 667888777633223333334443 4543221 1112211 00 0123567888887652 1
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007782 507 AIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 507 a~~Itd~M~~aAA~aLA~~v~ 527 (590)
...-.+.|...+++-|...+.
T Consensus 281 t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 222346666677777766653
No 164
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=82.64 E-value=7.7 Score=39.93 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=88.2
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH-------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 354 (590)
Q Consensus 297 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 354 (590)
..+.+.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 86 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~-- 163 (334)
T 2pi1_A 86 KGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF-- 163 (334)
T ss_dssp HTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC--
Confidence 35566664222 2444567777777652 35679999999999999999999988643
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007782 355 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 430 (590)
Q Consensus 355 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 430 (590)
|+ +++.+|+..- . . .. ...-...+|.|+++. .|+++=.- ...++|+++.++
T Consensus 164 ---G~-------~V~~~d~~~~------~-~--~~----~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 218 (334)
T 2pi1_A 164 ---GM-------KVLCYDVVKR------E-D--LK----EKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERIS 218 (334)
T ss_dssp ---TC-------EEEEECSSCC------H-H--HH----HTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHH
T ss_pred ---cC-------EEEEECCCcc------h-h--hH----hcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHh
Confidence 64 6787876421 0 1 00 111112359999986 89887431 334689999999
Q ss_pred HHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEE
Q 007782 431 AMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIF 468 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aif 468 (590)
.|. +..|+.=.|.-..--|-.-.+|+ .+|+.-.
T Consensus 219 ~mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~g 251 (334)
T 2pi1_A 219 LMK---DGVYLINTARGKVVDTDALYRAY--QRGKFSG 251 (334)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHH--HTTCEEE
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHH--HhCCceE
Confidence 995 66788877764422333333444 3455443
No 165
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=82.43 E-value=12 Score=38.20 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=81.7
Q ss_pred CCCceeccCCCch---HHHHHHHHHHHHHH-------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 354 (590)
Q Consensus 297 ~~~~~FNDDiQGT---aaV~LAgll~A~r~-------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~ 354 (590)
..+.+.|---..+ |=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 5677777543343 33468888877651 34679999999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHHHHH
Q 007782 355 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 430 (590)
Q Consensus 355 ~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 430 (590)
|+ +++.+|+.. .. . .. .++. ..+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~~-~-~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----MK-G-DH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----CS-S-CC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----ch-h-hH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 64 588888752 11 1 11 1121 2378898886 898885421 23689999999
Q ss_pred HHHcCCCCcEEEecCCCC
Q 007782 431 AMASFNEKPLILALSNPT 448 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSNPt 448 (590)
.|. +.-++.=.|.-.
T Consensus 222 ~mk---~ga~lIn~srg~ 236 (333)
T 1dxy_A 222 LMK---PGAIVINTARPN 236 (333)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCc
Confidence 995 566777777633
No 166
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=82.35 E-value=1.5 Score=47.23 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=59.2
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-----cccCCCCCHHHHh
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 406 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-----~~~~~~~~L~e~V 406 (590)
||.|+|+|..|..+|..|... |. +++++|+.. ++ +....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999988653 63 578887641 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007782 407 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 448 (590)
Q Consensus 407 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 448 (590)
+.. ++|++| ++...+...+++++.+... .+.-||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 753 488877 4443434567788777643 3456788888854
No 167
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=82.20 E-value=2.5 Score=42.41 Aligned_cols=109 Identities=13% Similarity=0.173 Sum_probs=63.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-----hhccc------cCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEP 398 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-----~fA~~------~~~ 398 (590)
..||.|+|+|..|..+|..+...-... . ....+++++|+..-.. .+. .....++ .|-.. ..-
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIG-GKK-LTEIINTQHENVKYLPGHKLPPNVVA 80 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSS-SSB-HHHHHHHHSCCTTTSTTCCCCTTEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhh-hhH-HHHHHHhcCcccccCCcccCccCeEE
Confidence 368999999999999999997652110 0 0014688888753211 000 0111110 01000 001
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCCC
Q 007782 399 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 449 (590)
Q Consensus 399 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 449 (590)
..++.|+++. .|++| ++... ...+++++.++.+. +..+|..++|-.+
T Consensus 81 ~~~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 81 VPDVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp ESSHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred EcCHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 1468888875 88777 33333 46789999887653 4678889999654
No 168
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=82.10 E-value=0.62 Score=45.41 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=55.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc---------cCCCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---------HEPVNN 401 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~---------~~~~~~ 401 (590)
-||.|+|+|..|..+|..+... | .+++++|++.= + ++..++.-... .-...+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 64 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----H---IEAIRKNGLIADFNGEEVVANLPIFS 64 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----H---HHHHHHHCEEEEETTEEEEECCCEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----H---HHHHHhCCEEEEeCCCeeEecceeec
Confidence 3899999999999999888643 5 36888887521 0 11111100000 000012
Q ss_pred HHHHhccc-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 007782 402 LLDAVKVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 449 (590)
Q Consensus 402 L~e~V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 449 (590)
..|+.+.+ +.|++|= +... -..+++++.++.+ .+..+|..++|...
T Consensus 65 ~~~~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 65 PEEIDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp GGGCCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred chhhcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 22333211 3787773 3323 2468888888764 34678888998663
No 169
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=81.94 E-value=1.2 Score=42.25 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=55.5
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
+|-...||.|+|+|..|..+|..+... |. +++++|++- ++ +.. ++...-...++.++
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~~----~~~~g~~~~~~~~~ 80 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TAR----LFPSAAQVTFQEEA 80 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HHH----HSBTTSEEEEHHHH
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHH----HHHcCCceecHHHH
Confidence 333457899999999999999988642 53 588887641 11 111 11111011267888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++. +|++|=+.. +. ..+++++ ++...+.-+|.-+||+..
T Consensus 81 ~~~--~DvVi~av~-~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 81 VSS--PEVIFVAVF-RE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp TTS--CSEEEECSC-GG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred HhC--CCEEEECCC-hH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 875 898884333 32 3455554 433235668889999873
No 170
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=81.91 E-value=8.6 Score=38.93 Aligned_cols=160 Identities=12% Similarity=0.084 Sum_probs=96.5
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ... +. ...+|.|+
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~----~~---~~~-----~~---~~~~l~el 170 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS----VD---QNV-----DV---ISESPADL 170 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC----CC---TTC-----SE---ECSSHHHH
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc----cc---ccc-----cc---ccCChHHH
Confidence 468899999999999999999998753 64 688888752 11 111 11 23579999
Q ss_pred hcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCC--Cccee
Q 007782 406 VKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPF--DPFEY 479 (590)
Q Consensus 406 V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF--~pv~~ 479 (590)
++. .|+++=.- ..-++|+++.++.|. +..+|.=.|.-..--|---.+|++ +|+.-.|.=--| +|.
T Consensus 171 l~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~~vd~~aL~~aL~--~g~i~ga~lDV~~~EP~-- 241 (290)
T 3gvx_A 171 FRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARADVVSKPDMIGFLK--ERSDVWYLSDVWWNEPE-- 241 (290)
T ss_dssp HHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGGGBCHHHHHHHHH--HCTTCEEEESCCTTTTS--
T ss_pred hhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhcccCCcchhhhhh--hccceEEeeccccCCcc--
Confidence 987 88887432 224678899888885 677888777633222222233333 343322211111 111
Q ss_pred CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCcc
Q 007782 480 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEE 529 (590)
Q Consensus 480 ~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~v~~~ 529 (590)
..-=+..|+.+-|=++=| ....-.+.|...+++-|.....-|
T Consensus 242 ----~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~~~~ 283 (290)
T 3gvx_A 242 ----ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFFEGE 283 (290)
T ss_dssp ----CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHTC--
T ss_pred ----cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhhcCC
Confidence 111245688888876511 234456778888888887776543
No 171
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=81.86 E-value=5.9 Score=41.90 Aligned_cols=165 Identities=12% Similarity=0.021 Sum_probs=90.3
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. . ..... +.+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~----~---~~~~~-~~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRHR----L---PESVE-KEL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC----C---CHHHH-HHH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCCc----c---chhhH-hhc--CceecCCHHH
Confidence 5679999999999999999999987532 53 577777641 1 01111 111 0011247889
Q ss_pred HhcccCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCC--cce
Q 007782 405 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFD--PFE 478 (590)
Q Consensus 405 ~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~--pv~ 478 (590)
+++. .|+++=.- ...++|+++.++.|. +.-+|.=.|.-.---|-.-.+|++ +|+.--|.--=|. |..
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTARGKLCDRDAVARALE--SGRLAGYAGDVWFPQPAP 316 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSCGGGBCHHHHHHHHH--TTSEEEEEESCCSSSSCC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCCchHhhHHHHHHHHH--cCCeeEEEEEecCCCCCC
Confidence 8886 89888542 224688999888885 567888777532112212223333 4653322211111 110
Q ss_pred eCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007782 479 YNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 526 (590)
Q Consensus 479 ~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~v 526 (590)
.+.. -=+..|+.+-|=++-...-+ ...|...+++-|....
T Consensus 317 -~~~p--L~~~~nvilTPHia~~T~e~-----~~~~~~~~~~nl~~~~ 356 (393)
T 2nac_A 317 -KDHP--WRTMPYNGMTPHISGTTLTA-----QARYAAGTREILECFF 356 (393)
T ss_dssp -TTCG--GGTSTTBCCCCSCTTCSHHH-----HHHHHHHHHHHHHHHH
T ss_pred -CCCh--hHcCCCEEECCCCCcCcHHH-----HHHHHHHHHHHHHHHH
Confidence 0000 11356888888776422211 2334445555555554
No 172
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.81 E-value=2.2 Score=41.62 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=57.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-..+ ....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIVD-EATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSCS-EEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCcc-cccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 1111111100000 012356667765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC--CCCcEEEecCCC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 447 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 447 (590)
+|++| ++..+... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78877 44434333 8888888764 456677767763
No 173
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=81.51 E-value=1.2 Score=45.96 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=33.1
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56789999999999999999999876 76 799999976
No 174
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=81.18 E-value=2.2 Score=45.68 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=61.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 408 (590)
..||.|+|+|..|..+|..|... |. +++++|+. . +.+...++.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 36899999999999999988653 53 57777763 1 112222221100 01123578888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 409 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 409 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 44444445677887776543 456788888854
No 175
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=81.15 E-value=4 Score=41.78 Aligned_cols=191 Identities=13% Similarity=0.079 Sum_probs=109.6
Q ss_pred CCCceeccCC----CchHHHHHHHHHHHHHH----------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHHh
Q 007782 297 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 356 (590)
Q Consensus 297 ~~~~~FNDDi----QGTaaV~LAgll~A~r~----------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~ 356 (590)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4566665321 34455678888887763 25678999999999999999999988542
Q ss_pred cCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHHH
Q 007782 357 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 432 (590)
Q Consensus 357 ~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~M 432 (590)
|+ +++.+|+..- ....... + ....+|.|+++. .|+++=.- ..-++|+++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~~-~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVES-Y----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCEE-E----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhhh-h----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 64 5777876421 1111111 1 011468888876 88887431 23468899988888
Q ss_pred HcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCeeeCcCCCcccccchhhhHHHHHhCCcccC
Q 007782 433 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 511 (590)
Q Consensus 433 a~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~-~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~It 511 (590)
. +..++.=.|.-..--|---.+|++ +|+.-.|.=-=|++--. .+. .-=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL~--~g~i~gA~lDV~~~EPl~~~~--pL~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAALD--SGKLKGAMLDVFSQEPLPQES--PLWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCCTTC--GGGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHHH--hCCccEEEcCCCCCCCCCCCC--hhhcCCCEEECCCCCc------ccH-H
Confidence 5 667887777644223333334443 45543332111111000 000 0114467888887652 222 2
Q ss_pred HHHHHHHHHHHHcccC
Q 007782 512 DDMLLAASEALAKQVT 527 (590)
Q Consensus 512 d~M~~aAA~aLA~~v~ 527 (590)
+.|...+++-|.....
T Consensus 286 ~~~~~~~~~ni~~~~~ 301 (315)
T 3pp8_A 286 AEAIDYISRTITQLEK 301 (315)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5677777777766654
No 176
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.80 E-value=0.73 Score=42.81 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=58.9
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc---c--ccCCCCCHHHH
Q 007782 332 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 405 (590)
Q Consensus 332 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA---~--~~~~~~~L~e~ 405 (590)
||+|+| +|..|..+|..+.. .| .+++++|++- ++ .+..++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988864 25 3688888641 11 211111110 0 011 2468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 449 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 449 (590)
++. .|++|=+.. + -..+++++.+....+..+|.-+||+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 876 898884433 3 235677777654334678999999774
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.80 E-value=1.3 Score=47.57 Aligned_cols=100 Identities=14% Similarity=0.130 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHhcCCCeeeeeecCCCchHHHHHHHHc-CCCcee--ccCCCchHHHHHHHHHHHHHHhC--------CCC
Q 007782 260 LLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIG--------GTL 328 (590)
Q Consensus 260 ~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL~ryr-~~~~~F--NDDiQGTaaV~LAgll~A~r~~g--------~~l 328 (590)
.+..+++.+...+ |+ |.|+-+....-.++-++|. ..+|++ |+..-+.+.....-|+..+.... ..-
T Consensus 134 ~~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~ 210 (521)
T 1hyu_A 134 DVVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKR 210 (521)
T ss_dssp HHHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTS
T ss_pred HHHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhccccccccccccc
Confidence 3566666666677 54 4555444445567888886 456644 66566666666666666543321 012
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|||.||+..|..+.. .|+ ++.++|++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~~ 244 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGER 244 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 34679999999999999988764 263 56777753
No 178
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=80.57 E-value=0.92 Score=46.49 Aligned_cols=88 Identities=22% Similarity=0.317 Sum_probs=53.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc----ccCCCCCHHHHhc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAVK 407 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----~~~~~~~L~e~V~ 407 (590)
||+++|||-.|--+|+.|.+ ..++.++|... ++++..+ +++. +..+..+|.+.++
T Consensus 18 kilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHHh
Confidence 79999999988777766531 13577777641 1122211 2222 2222346888888
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 408 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
+ .|++|-+ .|+-+...++++-.+... . +|-+|-
T Consensus 77 ~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 77 E--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp T--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred C--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 5 7998854 455688888888665443 2 455664
No 179
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.46 E-value=2 Score=43.96 Aligned_cols=108 Identities=8% Similarity=0.147 Sum_probs=60.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-----hhccc------cCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-----PWAHE------HEPV 399 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-----~fA~~------~~~~ 399 (590)
.||.|+|+|..|..+|..+...-... . .-..+++++|+..-+. .++ .....++ .|-.. ..-.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~-~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~ 94 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVN-GER-MVDIINNKHENTKYLKGVPLPHNIVAH 94 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC----CC-HHHHHHHHCBCTTTSTTCBCCTTEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhh-hHH-HHHHHHhcCcccccCCcccCcCCeEEE
Confidence 48999999999999999997652110 0 0014688888753210 000 0111100 00000 0012
Q ss_pred CCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHc----C-CCCcEEEecCCCCC
Q 007782 400 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----F-NEKPLILALSNPTS 449 (590)
Q Consensus 400 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 449 (590)
.++.|+++. .|++|= +... -..+++++.++. . .+..+|..++|-.+
T Consensus 95 ~~~~ea~~~--aDvVil-av~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 95 SDLASVIND--ADLLIF-IVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp SSTHHHHTT--CSEEEE-CCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CCHHHHHcC--CCEEEE-cCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 467788875 787763 3222 467888888875 3 34568888998654
No 180
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.28 E-value=3.3 Score=38.67 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=56.1
Q ss_pred CCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhc---h-hhcc-ccCCC
Q 007782 326 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---K-PWAH-EHEPV 399 (590)
Q Consensus 326 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k---~-~fA~-~~~~~ 399 (590)
.+|++.+|+|.|| |-.|..+++.|++ .| -++++++++. + .+...+ . .+.. |..
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~---~~~~~~~~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----E---QGPELRERGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----G---GHHHHHHTTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----H---HHHHHHhCCCceEEEcccH--
Confidence 4578899999998 8888888887764 25 3688887651 1 121111 1 1111 111
Q ss_pred CCHHHHhcccCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 400 NNLLDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 400 ~~L~e~V~~vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.++.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|
T Consensus 76 ~~~~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp SCCGGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 56777777 49999977765421 0345666666555555666544
No 181
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=80.06 E-value=2.3 Score=42.18 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999988642 53 57888764
No 182
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=79.85 E-value=6.8 Score=40.71 Aligned_cols=161 Identities=14% Similarity=0.107 Sum_probs=97.1
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. . ....+. .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~------~~~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--S------KERARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--H------HHHHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--C------HHHHHh---cCceEeCCHHH
Confidence 5678999999999999999999988542 64 677787641 0 000000 01112358999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEE------EecCCCC
Q 007782 405 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAI------FASGSPF 474 (590)
Q Consensus 405 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~ai------fAsGSPF 474 (590)
+++. .|+++=. ....++|+++.++.|. +..++.=.|.-..--|---.+|++ +|+.- |.. -|.
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl 283 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPI 283 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCC
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCC
Confidence 9987 8988843 2234689999999885 677888888744334444455554 35432 221 122
Q ss_pred CcceeCCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007782 475 DPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 475 ~pv~~~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~v~ 527 (590)
++ .. .-=+..|+.+-|=+|-. ...-.+.|...+++-|.....
T Consensus 284 ~~----~~--pL~~~~nvilTPHia~~-----t~e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 284 LQ----GH--TLLRMENCICTPHIGYV-----ERESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp CS----CC--GGGGCTTEEECCSCTTC-----BHHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CC--hhhcCCCEEECCCCCCC-----CHHHHHHHHHHHHHHHHHHHc
Confidence 11 00 01235688888877421 111224566667777766654
No 183
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=79.85 E-value=2.3 Score=43.36 Aligned_cols=104 Identities=22% Similarity=0.285 Sum_probs=64.3
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CCCHHHHhccc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~--~~~L~e~V~~v 409 (590)
||.|+|||..|..+|-+|+.. |+ -..+.|+|.+-=...+-.-+|.+- .+|...... ..+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999998887642 54 256999997521111111123321 122211111 1122356665
Q ss_pred CCcEEEeccCCCCC--CC------------HHHHHHHHcCCCCcEEEecCCCC
Q 007782 410 KPTILIGSSGVGRT--FT------------KEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 410 kPtvLIG~S~~~g~--Ft------------~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.|.+.. -| +++++.++++++..||+-.|||-
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8999866654421 12 46788888999999999999997
No 184
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=79.79 E-value=2.3 Score=44.19 Aligned_cols=107 Identities=17% Similarity=0.339 Sum_probs=64.1
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHH
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 405 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~ 405 (590)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865543 365 246999997410000000013322 22110 0011478888
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007782 406 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 448 (590)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 89888444433 21 23466777888898885 88899997
No 185
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=79.75 E-value=2 Score=43.57 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 56999999999999999988653 32 1368888875
No 186
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=79.74 E-value=1.6 Score=41.98 Aligned_cols=96 Identities=13% Similarity=0.190 Sum_probs=56.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 407 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~ 407 (590)
+..||+|.|||-.|..+++.|++. | .+++.++++- +.+.+. ..+.. +..+..++.++++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~-~~~~~~Dl~d~~~~~~~~~ 61 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAG-VQTLIADVTRPDTLASIVH 61 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTT-CCEEECCTTCGGGCTTGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccC-CceEEccCCChHHHHHhhc
Confidence 346899999998888888877652 5 3677777641 112211 11111 2222234556666
Q ss_pred ccCCcEEEeccCCCC-----------CCCHHHHHHHHcCCCCcEEEecC
Q 007782 408 VIKPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
. ++|++|=+.+... ..|..+++++.+..-+.+||.=|
T Consensus 62 ~-~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 62 L-RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp G-CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred C-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 4 6999996654321 12567888887666567887544
No 187
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=79.71 E-value=1.5 Score=44.25 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999998753 53 57777764
No 188
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=79.57 E-value=11 Score=38.39 Aligned_cols=122 Identities=15% Similarity=0.173 Sum_probs=77.4
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH---------------------hCCCCccceEEEeCcChHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~---------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~ 352 (590)
..+.+.|----. +|=-+++-+|+..|- .|..|.+.+|.|+|.|..|-.+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 456666654333 333467777877653 2356889999999999999999998853
Q ss_pred HHHhcCCChhhhcCcEEEEcC-CCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEeccC----CCCCCCHH
Q 007782 353 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 427 (590)
Q Consensus 353 ~~~~~G~s~eeA~~~i~lvD~-~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~e 427 (590)
.| -+++.+|+ .. +. ...+ .+ ......+|.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G-------~~V~~~d~~~~-------~~-~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FD-------MDIDYFDTHRA-------SS-SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TT-------CEEEEECSSCC-------CH-HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CC-------CEEEEECCCCc-------Ch-hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 25 36888886 41 10 0111 01 00112378898876 888874321 23578888
Q ss_pred HHHHHHcCCCCcEEEecCC
Q 007782 428 VIEAMASFNEKPLILALSN 446 (590)
Q Consensus 428 vv~~Ma~~~erPIIFaLSN 446 (590)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888774 5667777776
No 189
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=79.51 E-value=1.6 Score=42.98 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 53 67877764
No 190
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=79.45 E-value=2 Score=45.56 Aligned_cols=22 Identities=32% Similarity=0.560 Sum_probs=20.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~ 352 (590)
.||.|+|||+=|+.+|..+.+.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHc
Confidence 4999999999999999999875
No 191
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=79.32 E-value=11 Score=40.73 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-.||.|+|+|..|.|||..++.+ |. +++++|++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-----GH-------QVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEECC
Confidence 46899999999999999998753 64 58888864
No 192
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=79.28 E-value=3.5 Score=44.20 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=59.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch-hhc-cccCCCCCHHHHhcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~-~fA-~~~~~~~~L~e~V~~ 408 (590)
.||.|+|+|..|..+|..|... |. +++++|+.. + .+...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988653 63 577887641 1 1111111 000 001123578888863
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcCC-CCcEEEecCCCC
Q 007782 409 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 448 (590)
Q Consensus 409 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 448 (590)
+ ++|++| ++...+...+++++.+..+- +.-||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488777 44434345777887776543 456888888854
No 193
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=79.22 E-value=5.2 Score=39.34 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=62.7
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh----chhhcc-ccCCCCC
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 401 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~----k~~fA~-~~~~~~~ 401 (590)
++..||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... +..+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999999 88888888888753 52 2367777765321 111111111 111111 1122246
Q ss_pred HHHHhcccCCcEEEeccCCCCCC----------------CHHHHHHHHcCCCCcEEEecC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 445 (590)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999877754321 356888888776666888644
No 194
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.09 E-value=3.7 Score=44.57 Aligned_cols=98 Identities=14% Similarity=0.200 Sum_probs=61.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHhcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V~~ 408 (590)
.+|.|+|+|..|..+|..+... |. +++++|+. . +..+...+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----V---SKVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----T---HHHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----H---HHHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5899999999999999988753 63 57777764 1 11222211111110 113678888875
Q ss_pred c-CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007782 409 I-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 448 (590)
Q Consensus 409 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 448 (590)
+ +||++| ++-..+..++++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 3 478776 4443444567788877654 4667888888844
No 195
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=79.08 E-value=3.2 Score=40.65 Aligned_cols=91 Identities=13% Similarity=0.201 Sum_probs=57.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
.||.|+|+ |..|..+|..+.. .|. +++++|++- +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~-------~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP-------EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH-------HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH-------HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998864 252 688887641 11111111 1 1111356677765
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 448 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 448 (590)
+|++|= +..+.. .+++++.+... .+..+|.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 888883 333333 68888888754 3456777788854
No 196
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.06 E-value=4.8 Score=42.89 Aligned_cols=71 Identities=25% Similarity=0.374 Sum_probs=47.4
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
--|++|+|+ |-+|.|-++.+... |.. ..++...|.+= ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 468999999 99999998887643 641 12566666541 01100 01 23443
Q ss_pred cCCcEEEeccCC----CCCCCHHHHHHH
Q 007782 409 IKPTILIGSSGV----GRTFTKEVIEAM 432 (590)
Q Consensus 409 vkPtvLIG~S~~----~g~Ft~evv~~M 432 (590)
.|++||+--. |.++|+|+|+.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998764 568999999988
No 197
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.02 E-value=2.1 Score=42.01 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988753 5 367777764
No 198
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.98 E-value=0.99 Score=46.71 Aligned_cols=108 Identities=18% Similarity=0.250 Sum_probs=66.0
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 404 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e 404 (590)
+....||.|+|||..|.++|-.++.. |+ ...+.|+|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888642 54 257999997510000000012221 1232211 1123453
Q ss_pred HhcccCCcEEEeccCCC---CC-----C------CHHHHHHHHcCCCCcEEEecCCCC
Q 007782 405 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 448 (590)
+++. .|++|=+.+.+ |- | -+++++.|+++++.-+|+-.|||.
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 139 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV 139 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH
Confidence 5665 88887444433 31 2 247788888999999999999997
No 199
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=78.97 E-value=10 Score=39.01 Aligned_cols=120 Identities=12% Similarity=0.057 Sum_probs=79.1
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
..+++.|----. +|=-+++.+|+..|- .|..|.+.+|.|+|.|..|..+|+.+..
T Consensus 111 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~---- 186 (335)
T 2g76_A 111 KGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS---- 186 (335)
T ss_dssp HTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH----
Confidence 356777753222 344467788877664 2567999999999999999999998753
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 430 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 430 (590)
.|+ +++.+|+.. .+. .+.. .-...+|.|+++. .|+++=.- ...++|+++.++
T Consensus 187 -~G~-------~V~~~d~~~----------~~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 243 (335)
T 2g76_A 187 -FGM-------KTIGYDPII----------SPE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFA 243 (335)
T ss_dssp -TTC-------EEEEECSSS----------CHH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHT
T ss_pred -CCC-------EEEEECCCc----------chh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHh
Confidence 253 578787641 110 1111 0012479898886 89888542 123578888888
Q ss_pred HHHcCCCCcEEEecCC
Q 007782 431 AMASFNEKPLILALSN 446 (590)
Q Consensus 431 ~Ma~~~erPIIFaLSN 446 (590)
.|. +..++.=.|.
T Consensus 244 ~mk---~gailIN~ar 256 (335)
T 2g76_A 244 QCK---KGVRVVNCAR 256 (335)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 5678887776
No 200
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.63 E-value=1.2 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=28.5
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999988542 14 368888874
No 201
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=78.52 E-value=3.6 Score=41.40 Aligned_cols=100 Identities=10% Similarity=0.155 Sum_probs=59.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
..||.|+|+|..|..+|..|... |.. ...+++++|+. .++ +.+...++ + ...-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l~~-~--G~~~~~~~~e~~~~- 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSALRK-M--GVKLTPHNKETVQH- 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHHHH-H--TCEEESCHHHHHHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHHHH-c--CCEEeCChHHHhcc-
Confidence 45899999999999999988653 531 11468888764 110 01111110 0 00112367777775
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 449 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 449 (590)
.|++| ++..+ -..+++++.++.. .+..+|.-+||..+
T Consensus 85 -aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 -SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77666 33323 4567788777653 34567888888774
No 202
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.24 E-value=2.4 Score=42.36 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=28.2
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+...||.|+|+|..|.++|..+... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999998753 53 57777764
No 203
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.90 E-value=2.7 Score=41.22 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357777764
No 204
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=77.63 E-value=3.3 Score=40.31 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=18.7
Q ss_pred ceEEEeCcChHHHHHHHHHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIAL 351 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~ 351 (590)
.||.|+|+|..|..+|..+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~ 24 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR 24 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHh
Confidence 389999999999999998864
No 205
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=77.36 E-value=12 Score=38.85 Aligned_cols=209 Identities=14% Similarity=0.110 Sum_probs=118.8
Q ss_pred eeeeecCCCchHHHHHHHHcCCCceeccCCCc---hHHHHHHHHHHHHHHh------------------------C-CCC
Q 007782 277 LIQFEDFANHNAFELLAKYGTTHLVFNDDIQG---TASVVLAGVVAALKLI------------------------G-GTL 328 (590)
Q Consensus 277 lIqfEDf~~~~Af~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~A~r~~------------------------g-~~l 328 (590)
+|+.--.+..| .++-.--+..+.+.|----. +|=-+++.+|+..|-. | ..|
T Consensus 88 ~I~~~~~G~d~-id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDN-IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTT-BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCc-ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 36665555554 22222223567777754323 4444788888887621 2 468
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
.+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. . . .+.+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~-~---~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD-G-V---ERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT-T-H---HHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h-h---Hhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998854 264 578787541 11 0 1 1111 01123478898886
Q ss_pred cCCcEEEecc----CCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCccee
Q 007782 409 IKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEY 479 (590)
Q Consensus 409 vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifA-----sGSPF~pv~~ 479 (590)
.|+++=.- ...++++++.++.|. +..++.=.|.=..--|..-.+|++ +|+.-.| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---
Confidence 88887432 234678888888884 566888787744223333334443 4544322 2333321
Q ss_pred CCeeeCcCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007782 480 NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQV 526 (590)
Q Consensus 480 ~G~~~~p~Q~NN~yiFPGiglG~l~s~a~~Itd~M~~aAA~aLA~~v 526 (590)
.+.. --..+|+.+-|=++- -+....+.|...+++-+....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~-----~t~~~~~~~~~~~~~ni~~~~ 333 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAW-----YSEQASIEMREEAAREIRRAI 333 (347)
T ss_dssp TSST--TTTCSSEEECSSCTT-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 1111 124789999998763 222223455555666665554
No 206
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.27 E-value=2.2 Score=36.21 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=25.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888754 24 368888874
No 207
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.22 E-value=1.1 Score=46.55 Aligned_cols=117 Identities=12% Similarity=0.112 Sum_probs=69.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc--CCCCCHHHHh
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAV 406 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~--~~~~~L~e~V 406 (590)
...||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....++.+ +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~ 87 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-S 87 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-C
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-h
Confidence 347999999999999999988753 65 257999997410000000012221 2333211 01134544 6
Q ss_pred cccCCcEEEeccCC---CCC-----C------CHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhccc
Q 007782 407 KVIKPTILIGSSGV---GRT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS 462 (590)
Q Consensus 407 ~~vkPtvLIG~S~~---~g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt 462 (590)
+. .|++|=+.+. +|- | -+++++.+.++++.-+|+-.|||.. ....-+++.+
T Consensus 88 ~d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s 152 (330)
T 3ldh_A 88 AG--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS 152 (330)
T ss_dssp SS--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh
Confidence 55 8988833333 331 1 2467778889999999999999972 3334444443
No 208
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=76.99 E-value=3.2 Score=41.51 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.3
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+-.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34447899999999999999998753 53 67778774
No 209
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=76.96 E-value=8.5 Score=39.47 Aligned_cols=195 Identities=14% Similarity=0.104 Sum_probs=108.7
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH--------------------hCCCCccceEEEeCcChHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 353 (590)
Q Consensus 297 ~~~~~FNDDiQ---GTaaV~LAgll~A~r~--------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~ 353 (590)
..+.+.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 45666664322 2344567777776652 2456899999999999999999998753
Q ss_pred HHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHH
Q 007782 354 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 429 (590)
Q Consensus 354 ~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 429 (590)
.|+ +++.+|+... .....+..-+ ...+|.|+++. .|+++=.- ...++|+++.+
T Consensus 167 ---~G~-------~V~~~d~~~~-------~~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL-------DTQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC-------CHHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC-------cHhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 264 5788887531 0111111111 12379999987 88887542 23468999999
Q ss_pred HHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCeeeCc-------CCCcccccchhhhHHH
Q 007782 430 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-------GQANNAYIFPGFGLGL 502 (590)
Q Consensus 430 ~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv~~~G~~~~p-------~Q~NN~yiFPGiglG~ 502 (590)
+.|. +..+|.=.|+-..--|---.+|+ .+|+.-.|-=-=|++-.+ .....| =+..|+.+-|=+|-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 8885 67788888774322232233444 345544332111111100 000011 1345777777765321
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccC
Q 007782 503 VISGAIRVHDDMLLAASEALAKQVT 527 (590)
Q Consensus 503 l~s~a~~Itd~M~~aAA~aLA~~v~ 527 (590)
..-.+.|...+++-|.....
T Consensus 298 -----~e~~~~~~~~~~~ni~~~~~ 317 (330)
T 4e5n_A 298 -----RAVRLEIERCAAQNILQALA 317 (330)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHHHHc
Confidence 12234566666666666554
No 210
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=76.83 E-value=1.2 Score=44.40 Aligned_cols=101 Identities=14% Similarity=0.112 Sum_probs=59.5
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc---hh---chhhcc-ccCC
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HF---KKPWAH-EHEP 398 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~---~~---k~~fA~-~~~~ 398 (590)
+++..+|+|.|| |-.|-.|++.|++. | .+++.++++.- ...+.+. .. ...+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-----g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-----H-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 345679999999 98888888877642 5 35888877520 0000010 00 001111 1122
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 007782 399 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 442 (590)
Q Consensus 399 ~~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 442 (590)
..+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 2468888886679999988775432 3678999988766 455554
No 211
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=76.65 E-value=2.1 Score=41.95 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=25.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999888642 53 57777764
No 212
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=76.46 E-value=1.6 Score=46.74 Aligned_cols=37 Identities=27% Similarity=0.460 Sum_probs=32.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45789999999999999999999875 76 799999987
No 213
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=76.43 E-value=6.4 Score=39.81 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=54.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH-Hhccc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKVI 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e-~V~~v 409 (590)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...++.-+.+ ....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~~-~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSCS-EEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCcc-hhcCCHHHHhhcc-
Confidence 7999999999999999988753 64 14788888741 1111111000000 01245666 6665
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecC
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 445 (590)
+|++| ++.... -.+++++.+... .+.-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 444343 356777776653 3455665544
No 214
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.80 E-value=1.3 Score=39.00 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----D-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 5799999999999999988652 5 368888875
No 215
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=75.71 E-value=3.7 Score=40.77 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=25.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|.++|..+... |. +++++|++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988642 53 57778764
No 216
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=75.66 E-value=1.1 Score=46.28 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=67.2
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCC-hhhhcCcEEEEcCCC---cccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 331 HRFLFLG-AGEAGTGIAELIALEISKQTKAP-VEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 331 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s-~eeA~~~i~lvD~~G---Lv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.||+|.| ||..|.-+|-+|+. .|+- +++- -.+.|+|.+. .+.-... +|.+...+|.++.....++.++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~-~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQP-IILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCC-EEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCC-CEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHH
Confidence 5899999 79999998888764 2441 1111 1289999852 1111111 1433222343322223568888
Q ss_pred hcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcE-EEecCCCC
Q 007782 406 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPL-ILALSNPT 448 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 448 (590)
++. .|++|=+.+.+ |- ..+++++++.+++.+-+ |+-.|||.
T Consensus 77 ~~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 77 FKD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp TTT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 887 89888555433 21 24678888888888874 99999996
No 217
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=75.16 E-value=12 Score=37.56 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999999764 53 478888874
No 218
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=75.14 E-value=1.8 Score=40.06 Aligned_cols=94 Identities=14% Similarity=0.133 Sum_probs=54.5
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-----chhhcc-ccCCCCCHH
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 403 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-----k~~fA~-~~~~~~~L~ 403 (590)
++|+|.|| |-.|..+++.|++. .| -++++++++. + ..++.. +..+.. +..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 45999996 77788888777621 35 3678777651 1 012211 001111 212224577
Q ss_pred HHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEe
Q 007782 404 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILA 443 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFa 443 (590)
++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~i 106 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGV 106 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEE
Confidence 78874 899997776543227778888876554556654
No 219
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=75.07 E-value=3 Score=39.91 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=27.1
Q ss_pred CCccceEEEeCc-Ch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGA-GE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GA-Gs-Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++++++||.|| |+ .|..+|+.+++ .| -+++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCC
Confidence 478899999999 74 77778777764 26 358888764
No 220
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=74.70 E-value=1.6 Score=45.43 Aligned_cols=120 Identities=21% Similarity=0.205 Sum_probs=65.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-c--ccCCCCCHHHH
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEPVNNLLDA 405 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-~--~~~~~~~L~e~ 405 (590)
.+.||+|+|+|.+|-.+|+.|++. .++.++|++ .++ ++.....+. . +.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999998887531 357777764 111 222211121 0 11122468888
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcc
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 477 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGSPF~pv 477 (590)
++. +|++|-+.. . .+..+++++-.+. .=.++-+|.-....+.--++|-+ .|. .+..|+=|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~~--G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIKS--KVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHHT--TCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHHh--CCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 885 899997632 2 3566776654332 22356677622112122334433 353 33455556664
No 221
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=74.61 E-value=3.5 Score=41.58 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 51 367888875
No 222
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=74.49 E-value=7.7 Score=42.39 Aligned_cols=98 Identities=14% Similarity=0.233 Sum_probs=56.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch-hchhhcc-c--cCCCCC-HHH
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-E--HEPVNN-LLD 404 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-~k~~fA~-~--~~~~~~-L~e 404 (590)
+.||||+|||+.|-++|.+|++. .++. ..+|.+.|++- .+. ++.+ ....+.. + ...... |..
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~-~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKV-DVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSC-CHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhh-hHHhhcCCceeEEeccchhHHHHHHH
Confidence 47899999999999999999764 3442 24788888752 111 1211 1112221 1 111112 334
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 405 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
.|+. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 5654 59999654 335788888876532 223455665
No 223
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.88 E-value=6.2 Score=38.87 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=60.8
Q ss_pred CCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCc---CCCchhchhhcc-ccCCCC
Q 007782 326 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 400 (590)
Q Consensus 326 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~---~~l~~~k~~fA~-~~~~~~ 400 (590)
.++++.+|+|.|| |-.|..+++.|++ .| -+++++|+.. .... ..+. +..+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4678889999998 7777777776653 25 3688887741 1100 1110 111111 212223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC-C------------CHHHHHHHHcCCCCcEEEecC
Q 007782 401 NLLDAVKVIKPTILIGSSGVGRT-F------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 401 ~L~e~V~~vkPtvLIG~S~~~g~-F------------t~evv~~Ma~~~erPIIFaLS 445 (590)
++.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57777876679999988775532 0 345677776655567888644
No 224
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=73.76 E-value=24 Score=36.18 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=71.4
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999888543 64 56677753 11 1 111111 12357999
Q ss_pred HhcccCCcEEEec----cCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcc--cCCcEEEe
Q 007782 405 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTW--SKGRAIFA 469 (590)
Q Consensus 405 ~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~w--t~G~aifA 469 (590)
.++. .|+++=. ...-++|+++.++.|. +..++.=.|. -++-=|+|+-. ..|+.--|
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCceEE
Confidence 9987 8888742 2334799999999995 5666665544 45555544421 35664433
No 225
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=73.47 E-value=1.9 Score=46.26 Aligned_cols=182 Identities=17% Similarity=0.206 Sum_probs=96.4
Q ss_pred cccccccCcchHHHHHhcCCCCCeeEEEEec--------------------CceeecCCCCCCCcccchhhhHHHHHH--
Q 007782 158 GLYISLKEKGKILEVLKNWPERSIQVIVVTD--------------------GERILGLGDLGCQGMGIPVGKLALYTA-- 215 (590)
Q Consensus 158 Glyis~~d~g~i~~~l~nwp~~~v~viVVTD--------------------G~rILGLGDlG~~GmgI~iGKl~LYta-- 215 (590)
|.|++..|-..+.++|+. -+++++++.| |+++=-+-++|-.-.-|.++....++|
T Consensus 177 G~~~~~~D~~eik~lL~~---~Gi~v~~~~d~s~~ld~~~~~~~~~~~~~gg~~~~ei~~~~~A~~ni~~~~~~~~~A~~ 253 (458)
T 3pdi_B 177 SANLTPGDLEYIAESIES---FGLRPLLIPDLSGSLDGHLDENRFNALTTGGLSVAELATAGQSVATLVVGQSLAGAADA 253 (458)
T ss_dssp CTTCCHHHHHHHHHHHHT---TTCEEEEESCHHHHSSSCCCSSCCTTCCSCSBCHHHHGGGSSCSCEEEESGGGHHHHHH
T ss_pred CCCCChHHHHHHHHHHHH---cCCEEEEecCccccccCccccccccccCCCCCCHHHHHhhhhCcEEEEecHHHHHHHHH
Confidence 777777777788888885 4789998854 333333333443333444444443322
Q ss_pred ---hcCCCCCceeeEEeecCCCchhcccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCchHHHHH
Q 007782 216 ---LGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL 292 (590)
Q Consensus 216 ---~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlG~r~~R~~g~~Y~~~idefv~av~~~fGp~~lIqfEDf~~~~Af~lL 292 (590)
=-|+. .+-+ |..+|+ +=.++|++++.+.+|- ..| +.+
T Consensus 254 Le~~~GiP---~~~~--------------~~p~G~-----------~~T~~~l~~la~~~g~----~~~--------~~i 293 (458)
T 3pdi_B 254 LAERTGVP---DRRF--------------GMLYGL-----------DAVDAWLMALAEISGN----PVP--------DRY 293 (458)
T ss_dssp HHHHSCCC---EEEE--------------CCSCHH-----------HHHHHHHHHHHHHHSS----CCC--------HHH
T ss_pred HHHHHCCC---EEec--------------CCCcCH-----------HHHHHHHHHHHHHHCC----chH--------HHH
Confidence 12443 2111 011121 1268888888888863 122 233
Q ss_pred HHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007782 293 AKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 372 (590)
Q Consensus 293 ~ryr~~~~~FNDDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD 372 (590)
++.|.+ ++.++.-....|.+.|++|+|.+.-..++++.|.+ .|+.. +.++
T Consensus 294 ~~er~r------------------~~~~~~d~~~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~- 343 (458)
T 3pdi_B 294 KRQRAQ------------------LQDAMLDTHFMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAV- 343 (458)
T ss_dssp HHHHHH------------------HHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEE-
T ss_pred HHHHHH------------------HHHHHHHHHHhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEE-
Confidence 443321 12222222345778999999999999999998843 48632 2222
Q ss_pred CCCcccCCCcCCCchhchhhccc-cCCCCCHHHHhcccCCcEEEeccC
Q 007782 373 SKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG 419 (590)
Q Consensus 373 ~~GLv~~~R~~~l~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~ 419 (590)
+....+.+... +...- ..+...|++.++..+||.+||-|-
T Consensus 344 -----~~~~~~~~~~~--~~~~v~~~D~~~le~~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 344 -----VPARAAALVDS--PLPSVRVGDLEDLEHAARAGQAQLVIGNSH 384 (458)
T ss_dssp -----ESSCCSCCTTT--TSSCEEESHHHHHHHHHHHHTCSEEEECTT
T ss_pred -----ECCCChhhhhC--ccCcEEeCCHHHHHHHHHhcCCCEEEEChh
Confidence 11111111110 00000 011224778888999999999654
No 226
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.30 E-value=4.2 Score=37.48 Aligned_cols=96 Identities=10% Similarity=0.139 Sum_probs=53.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
.||+|.|| |-.|-.+++.|++ .| .++++++++. ++.+.+...-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6667666666653 25 4788888762 11111211111111122222457788875
Q ss_pred CCcEEEeccCCCC----------CCCHHHHHHHHcCCCCcEEEec
Q 007782 410 KPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILAL 444 (590)
Q Consensus 410 kPtvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaL 444 (590)
+|++|=+.+... ..+..++++|.+..-+.+||.=
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 111 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 899997765431 0245577777765555566643
No 227
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=73.22 E-value=2.4 Score=41.43 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=25.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999888642 52 57888764
No 228
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=73.18 E-value=2.4 Score=47.81 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.2
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|++.||+++|+|..|+-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46789999999999999999999875 76 799999987
No 229
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=73.07 E-value=3 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=24.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-||+|+|||.||+-.|-.|.. .|+ ++.++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 389999999999999988865 375 46667653
No 230
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=72.82 E-value=14 Score=38.14 Aligned_cols=45 Identities=22% Similarity=0.384 Sum_probs=27.9
Q ss_pred HHHHHHhC-CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 318 VAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 318 l~A~r~~g-~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+.|+...+ ..-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 201 ~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 246 (404)
T 3ip1_A 201 YNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEP 246 (404)
T ss_dssp HHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 44443333 44567999999998777655444432 364 57887765
No 231
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=72.47 E-value=8 Score=37.48 Aligned_cols=97 Identities=14% Similarity=0.165 Sum_probs=56.8
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|+|..|..+|..+... |.. .+++++|++. +.+...++.-... ....++.++++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 3799999999999999988642 531 3688888641 1111111000000 012467777762 3
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEecCCCC
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSNPT 448 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNPt 448 (590)
+|++| ++..+ -.+.++++.+.. ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 33333 256677777654 34556777777744
No 232
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=72.33 E-value=3.2 Score=40.95 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=28.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998854 253 2799999874
No 233
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=72.20 E-value=10 Score=35.18 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=54.8
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 405 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 405 (590)
+++.+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+...+..+.. |..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44678999996 66777777776643 52 13788888752 111111111111111 21222456667
Q ss_pred hcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 406 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 76 58999988775310 1345666666554455666433
No 234
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=71.77 E-value=11 Score=37.15 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=59.2
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-chhhcc-ccCCCCCHH
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 403 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-k~~fA~-~~~~~~~L~ 403 (590)
.++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355679999996 7777777777654 25 3688887752 1111112110 111111 212223577
Q ss_pred HHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 404 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 78887789999987775432 0345777777665567888544
No 235
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=71.51 E-value=4.7 Score=40.96 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=26.6
Q ss_pred HHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
+...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568889999999987643 111222345568899975555
No 236
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=71.45 E-value=8.7 Score=37.73 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=57.9
Q ss_pred CCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 326 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 326 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+... .-+.....++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~~----~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEEV----VGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSEE----ESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccEE----ecCcCCHHHHHH
Confidence 4677899999998 8888888887764 25 3577777652 11 111111 112222245778
Q ss_pred HhcccCCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007782 405 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 445 (590)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999877654211 345788888777778998655
No 237
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=71.42 E-value=7.1 Score=37.98 Aligned_cols=101 Identities=15% Similarity=0.240 Sum_probs=57.1
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcC--CCchh----chhhcc-ccCCCC
Q 007782 329 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD--SLQHF----KKPWAH-EHEPVN 400 (590)
Q Consensus 329 ~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~--~l~~~----k~~fA~-~~~~~~ 400 (590)
++.+|+|.|| |-.|..+++.|++ .| .+++.+|++. +..+ .+... +..+.. +..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4678999998 7778777777754 25 3688887642 1100 01000 011111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC------C----------CHHHHHHHHcCCC-CcEEEecC
Q 007782 401 NLLDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 445 (590)
Q Consensus 401 ~L~e~V~~vkPtvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 445 (590)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888889999988875421 0 3345555554443 67887644
No 238
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=71.29 E-value=9.7 Score=37.85 Aligned_cols=93 Identities=19% Similarity=0.278 Sum_probs=53.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc---cc-------c--CC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HE-------H--EP 398 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA---~~-------~--~~ 398 (590)
.||.|+|+|..|..+|..+... | .+++++|++.= .++..++... .. . ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ-------RIKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH-------HHHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH-------HHHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999887642 5 35788877410 0111111100 00 0 01
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCC
Q 007782 399 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 446 (590)
Q Consensus 399 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 446 (590)
..++.++++. +|++|=+.. . -..+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2467777764 787763332 2 2357888887654 33456666644
No 239
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=71.10 E-value=8.5 Score=37.32 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=43.5
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
..+++++++||.||++ ||...|+..+.+ .|. +++++|++.- .+......+.-|.....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 444445555544 363 5888876421 111111112112222234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007782 405 AVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 405 ~V~~v-----kPtvLIG~S~~~ 421 (590)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66555 799999776653
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=69.80 E-value=3.5 Score=39.97 Aligned_cols=34 Identities=12% Similarity=0.341 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+|+|+|||.||+..|..+.. .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999988864 353 688999864
No 241
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=69.74 E-value=12 Score=36.33 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=58.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 408 (590)
.||+|.|| |-.|..+++.|++. | .+++.+++. .+... +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 88888888877652 5 368888876 22211 22 111111 222 345777777
Q ss_pred cCCcEEEeccCCCCC------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++|++|=+.+..+. -|..+++++.+.+-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988775432 1467888888776667888544
No 242
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=69.35 E-value=4.6 Score=41.26 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=64.6
Q ss_pred eEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCC--CCCHHHHhcc
Q 007782 332 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 408 (590)
Q Consensus 332 riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~--~~~L~e~V~~ 408 (590)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. ..+..-+|.+. ++-..... ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 799999998777542 243 267999999741 11110012221 11000000 0246778887
Q ss_pred cCCcEEEeccCCC---CC-----------CCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 409 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 409 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
.|++|=+.+.+ |- .-+++++.+.++++.-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99888665544 31 1246777888899999999999997
No 243
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.62 E-value=4.4 Score=38.37 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=26.5
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+..|..|... | .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----R-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CCEEEEeCC
Confidence 5899999999999999888652 5 368899974
No 244
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=68.49 E-value=19 Score=35.70 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=61.2
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch-hchhhcc-ccC-CCCCH
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 402 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-~k~~fA~-~~~-~~~~L 402 (590)
.++..||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. .+..+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999996 88888888877653 23 4688888742 11111111 1111211 212 22357
Q ss_pred HHHhcccCCcEEEeccCCCC----------------CCCHHHHHHHHcCCCCcEEEecC
Q 007782 403 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 403 ~e~V~~vkPtvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778875 999997665432 23567899888777 78888665
No 245
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=67.70 E-value=5.2 Score=41.25 Aligned_cols=37 Identities=27% Similarity=0.434 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
+.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 3468999999999999999881 123 579999887543
No 246
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=67.66 E-value=8.8 Score=36.73 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.2
Q ss_pred eEEEeCcChHHHHHHHHHHH
Q 007782 332 RFLFLGAGEAGTGIAELIAL 351 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~ 351 (590)
||.|+|+|..|..+|..+..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999998865
No 247
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=67.51 E-value=13 Score=36.77 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=25.6
Q ss_pred ceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999998864 253 58888754
No 248
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=67.45 E-value=4.4 Score=39.18 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=23.5
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
||.|+|+|..|..+|..+. + |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~-----~-g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA-----R-RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH-----T-TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHh-----C-CC-------eEEEEeCC
Confidence 7999999999999998874 2 42 47777764
No 249
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.32 E-value=4.8 Score=41.20 Aligned_cols=37 Identities=30% Similarity=0.488 Sum_probs=29.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..-.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCCCC
Confidence 589999999999999998865 3642 379999987633
No 250
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=67.17 E-value=13 Score=39.01 Aligned_cols=111 Identities=11% Similarity=0.102 Sum_probs=60.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
.++++||+|+|.|-+|++.|+.+.+ .|. ++...|++-..... ..|. ...++-.. . . -.+.+
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g-~--~-~~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTG-S--L-NDEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEES-S--C-CHHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEEC-C--C-cHHHh
Confidence 3567899999999999999866643 363 57788886432100 1121 11111000 0 1 25666
Q ss_pred cccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 007782 407 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 472 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G~aifAsGS 472 (590)
+ .++.+|=.++.+. -.+++..+.. ...|++ + . .|-++...+.+.|-.|||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~---~----~----~~~~~~~~~~~vI~VTGT 112 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV---G----D----IELFCREAQAPIVAITGS 112 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE---C----H----HHHHHHHCCSCEEEEECS
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE---E----H----HHHHHHhcCCCEEEEECC
Confidence 6 4788775555542 3566665443 234443 1 1 223333345678888887
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=67.04 E-value=5 Score=38.41 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..+|+|+|||.||+..|..+... |. ++.++|++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46999999999999999888652 53 58999997
No 252
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=66.90 E-value=3.9 Score=42.50 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+||||+|+|.||+..|..|... +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4899999999999999988653 21 1368888875
No 253
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=66.89 E-value=16 Score=37.75 Aligned_cols=84 Identities=24% Similarity=0.351 Sum_probs=65.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch
Q 007782 309 TASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 387 (590)
Q Consensus 309 TaaV~LAgll~A~r~~g~~l~d~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~ 387 (590)
-.-+|-.|++--++..+.+|++.++|++|.+ -.|.-+|-||.. .|. .+.++.++
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 3456778999999999999999999999976 468888877754 243 34444332
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEeccCCCCCCCHHHHH
Q 007782 388 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIE 430 (590)
Q Consensus 388 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~ 430 (590)
.++|.+.+++ +|+||...|.++.++.++|+
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk 242 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK 242 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc
Confidence 1357888886 99999999999999999986
No 254
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=66.82 E-value=7.9 Score=36.82 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=55.8
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.++..||+|.|| |-.|..+++.|++ .|... ....- .+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~~---~~~~~--------------~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGLP---GEDWV--------------FVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCCT---TCEEE--------------ECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCcc---ccccc--------------ccCcee----cccCCHHHHHHH
Confidence 367789999997 8888888877764 25300 00000 010000 011112357888
Q ss_pred hcccCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 406 VKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 888899999988776431 1235788887776667888544
No 255
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=66.67 E-value=8.8 Score=39.45 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=29.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 378 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~ 378 (590)
.+|||+|||.||+..|..|.+. |. ..+|.++|+..-..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~-----~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GF-----EGRISLIGDEPHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEEECSSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----Cc-----CCeEEEEECCCCCC
Confidence 4899999999999999988653 54 24699998865443
No 256
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=66.59 E-value=4.8 Score=39.53 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=24.1
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999888765 375 46677764
No 257
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=66.54 E-value=5.8 Score=32.44 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=50.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch---hhcc-ccCCCCCHHH
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK---PWAH-EHEPVNNLLD 404 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~---~fA~-~~~~~~~L~e 404 (590)
...+|+|+|+|..|..+++.+.. .|. .+++++|++. ++ +...+. .+.. +.....++.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~---~~~~~~~~~~~~~~d~~~~~~~~~ 65 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AA---LAVLNRMGVATKQVDAKDEAGLAK 65 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HH---HHHHHTTTCEEEECCTTCHHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HH---HHHHHhCCCcEEEecCCCHHHHHH
Confidence 35789999999999999888764 252 3688888741 11 211110 1100 1111134666
Q ss_pred HhcccCCcEEEeccCCCCCCCHHHHHHHHcC
Q 007782 405 AVKVIKPTILIGSSGVGRTFTKEVIEAMASF 435 (590)
Q Consensus 405 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~ 435 (590)
+++ ++|++|=+.+ ..++..+++.+.+.
T Consensus 66 ~~~--~~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 66 ALG--GFDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp HTT--TCSEEEECSC--GGGHHHHHHHHHHT
T ss_pred HHc--CCCEEEECCC--chhhHHHHHHHHHh
Confidence 666 4899886653 34677777776543
No 258
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=66.48 E-value=5.2 Score=40.24 Aligned_cols=38 Identities=18% Similarity=0.080 Sum_probs=27.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+.+..+|+|+|||.||+..|..|.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999988765 263 6888887543
No 259
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=66.43 E-value=5.9 Score=38.00 Aligned_cols=86 Identities=10% Similarity=0.231 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
||+|.|| |-.|..+++.|+ . | .+++.+|++.-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 7899998 888877777664 2 4 3688887653111 001111235778888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 411 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 411 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|=+.+.... .|..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14567777765544 5887654
No 260
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.35 E-value=5.1 Score=39.03 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988754 25 3688999864
No 261
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=66.33 E-value=5.3 Score=38.49 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..+|||+|||.||+..|..+.. .|. ++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQA-------SVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEEcC
Confidence 3689999999999999988764 253 68899886
No 262
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=66.05 E-value=8.7 Score=36.77 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=57.6
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 409 (590)
||+|.|| |-.|..+++.|.+. .| .++..++++. ++...+......+.. +-.+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899997 88888888875431 13 4677776642 111111111111211 21222468888885
Q ss_pred CCcEEEeccCCCCC------CCHHHHHHHHcCCCCcEEEecC
Q 007782 410 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.|++|=+++.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999987765421 2467888888777677888544
No 263
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.94 E-value=4.1 Score=39.02 Aligned_cols=90 Identities=11% Similarity=0.150 Sum_probs=52.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|+|..|..+|..+.. .| .+++++|++ . +.+....+.+ ......++.|+++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~----~---~~~~~~~~~~--g~~~~~~~~~~~~~-- 60 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS----L---ERSKEIAEQL--ALPYAMSHQDLIDQ-- 60 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS----H---HHHHHHHHHH--TCCBCSSHHHHHHT--
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC----H---HHHHHHHHHc--CCEeeCCHHHHHhc--
Confidence 389999999999999887753 24 467777764 1 1122222111 11123578888874
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
+|++|=+.. + ...+++++.+. +..+|.-+++-.
T Consensus 61 ~D~Vi~~v~-~-~~~~~v~~~l~---~~~~vv~~~~~~ 93 (259)
T 2ahr_A 61 VDLVILGIK-P-QLFETVLKPLH---FKQPIISMAAGI 93 (259)
T ss_dssp CSEEEECSC-G-GGHHHHHTTSC---CCSCEEECCTTC
T ss_pred CCEEEEEeC-c-HhHHHHHHHhc---cCCEEEEeCCCC
Confidence 888774332 3 35567776653 334666665533
No 264
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.93 E-value=8.5 Score=37.34 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=43.7
Q ss_pred CCccceEEEeCcC-h--HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc------ccC
Q 007782 327 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHE 397 (590)
Q Consensus 327 ~l~d~riv~~GAG-s--Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~------~~~ 397 (590)
.+++.++||.||+ . .|..||+.+++ .| -+++++|++-+ . +.+...+..+.+ |..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 45556665543 36 35888887640 0 112222111111 111
Q ss_pred CCCCHHHHhccc-----CCcEEEeccCCCC
Q 007782 398 PVNNLLDAVKVI-----KPTILIGSSGVGR 422 (590)
Q Consensus 398 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 422 (590)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455555554 7999998777653
No 265
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=65.86 E-value=19 Score=34.76 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=53.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
+|+|.|| |-.|..+++.|++ .| .++.+++.. .++.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7999997 7777777776643 23 344444321 11111111111111113333 67888887 5
Q ss_pred CcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 007782 411 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 411 PtvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234778887777778998655
No 266
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=65.74 E-value=6 Score=34.17 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=26.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+..+|+|+|+|..|..+|+.+... | .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----G-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEECC
Confidence 346899999999999999888652 5 368888874
No 267
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=65.59 E-value=14 Score=35.02 Aligned_cols=78 Identities=13% Similarity=0.204 Sum_probs=42.9
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 404 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e 404 (590)
..++++.++||.||+. ||...++..+.+ .| -+++++|++- ++ +.... .+.-|..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHHH
Confidence 3468889999999753 444455555544 36 3588887741 11 22111 11112122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007782 405 AVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 405 ~V~~v-----kPtvLIG~S~~~ 421 (590)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999777654
No 268
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=65.25 E-value=5.4 Score=40.88 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=30.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCCC
Confidence 357899999999999999998653 642 469999886433
No 269
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=65.08 E-value=23 Score=38.49 Aligned_cols=120 Identities=19% Similarity=0.123 Sum_probs=76.7
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH------------------hCCCCccceEEEeCcChHHHHHHHHHHHHHHH
Q 007782 297 TTHLVFNDDIQG---TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 355 (590)
Q Consensus 297 ~~~~~FNDDiQG---TaaV~LAgll~A~r~------------------~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~ 355 (590)
..+.+.|----. +|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~---- 163 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA---- 163 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh----
Confidence 456666653322 344468888877653 2567899999999999999999998854
Q ss_pred hcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccCCcEEEecc----CCCCCCCHHHHHH
Q 007782 356 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 431 (590)
Q Consensus 356 ~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 431 (590)
.|+ +++.+|+.- . ....+ .+ .-...++.|+++. .|+++=.. ...++++++.+..
T Consensus 164 -~G~-------~V~~~d~~~----~----~~~a~-~~---g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 164 -FGA-------YVVAYDPYV----S----PARAA-QL---GIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp -TTC-------EEEEECTTS----C----HHHHH-HH---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCC----C----hhHHH-hc---CcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 253 588887641 1 11111 00 1011278899886 88887442 2345777777766
Q ss_pred HHcCCCCcEEEecC
Q 007782 432 MASFNEKPLILALS 445 (590)
Q Consensus 432 Ma~~~erPIIFaLS 445 (590)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 64 567887777
No 270
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=65.00 E-value=6.2 Score=35.17 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888652 5 478889876
No 271
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=64.71 E-value=5.4 Score=41.52 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=31.1
Q ss_pred HhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 323 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 323 ~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 344445568999999999999999888642 5 36777877644
No 272
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=68.36 E-value=1.4 Score=41.89 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=53.2
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhc
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 407 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 407 (590)
+.+.||.|+|+|..|..+|..+... | .+++++|+.-- . +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888653 4 24666665421 1 111 111111125666666
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCC
Q 007782 408 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 448 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 448 (590)
. +|++| ++..+. .++++++ ++...+..+|.-+||..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 3455552 33233456888888876
No 273
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=64.54 E-value=5.3 Score=38.94 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----Q-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----C-------CcEEEEeCC
Confidence 46899999999999999887642 5 368999987
No 274
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=64.19 E-value=6.3 Score=38.45 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GGH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCC
Confidence 4589999999999999988865 363 68899987
No 275
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=64.02 E-value=3.7 Score=45.04 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.1
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 356789999999999999999999864 76 799999987
No 276
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=63.95 E-value=7.9 Score=37.50 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=55.0
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
..||+|.|| |-.|..+++.|++ .|. +++++++. ... ++. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~-D~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DEL-NLL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTC-CTT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccC-Ccc-----------CHHHHHHHHHh
Confidence 468999996 8888888777753 252 46666543 111 121 11357777876
Q ss_pred cCCcEEEeccCCCCC-----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+++|++|=+.+..+. .|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988876531 1345677776666567888654
No 277
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=63.92 E-value=8.2 Score=38.97 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=28.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|++-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 4689999999999999987754 364 6889998743
No 278
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.77 E-value=5.6 Score=40.55 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 13 4678887664
No 279
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=63.57 E-value=4.9 Score=38.82 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..+|||+|||.||+..|..|... |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 47899999999999999888653 53 58888884
No 280
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=63.49 E-value=6.4 Score=39.08 Aligned_cols=35 Identities=26% Similarity=0.390 Sum_probs=28.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4689999999999999998875 26 36899998644
No 281
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=63.35 E-value=18 Score=35.28 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=58.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhh----------cc-ccC
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW----------AH-EHE 397 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f----------A~-~~~ 397 (590)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. . ........+ .. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6677777766654 25 3688887641 1 111111111 11 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 398 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 398 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22357778887789999987775421 1446788888777678988654
No 282
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=62.74 E-value=5.7 Score=39.53 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4679999999999999988865 264 577787765
No 283
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=62.66 E-value=6.3 Score=39.74 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988865 364 577888754
No 284
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=62.64 E-value=6.5 Score=39.14 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+..|+|+|||.+|+.+|..|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999998865 263 599999874
No 285
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=62.52 E-value=7.3 Score=40.05 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=28.9
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+..+++..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 18 ~~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 18 GSHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred cccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 3345677999999999999999988764 3 147899998
No 286
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.22 E-value=7.7 Score=39.32 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=26.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|||.||+..|..|.. .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45789999999999999988865 364 56777765
No 287
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=62.21 E-value=14 Score=35.94 Aligned_cols=99 Identities=13% Similarity=0.170 Sum_probs=56.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 408 (590)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. +..+.. +.....++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37999986 7778777777754 25 3678777631 110011211 111111 11122357777775
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 579999988775421 1345677777665567888544
No 288
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=62.06 E-value=6.7 Score=38.07 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|+|.||+..|..+.+ .|. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SGF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCC
Confidence 4689999999999999988764 253 68899985
No 289
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=61.96 E-value=7.3 Score=39.71 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|+|+|||.||+..|..|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988865 365 2377777653
No 290
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=61.87 E-value=6.9 Score=38.87 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
..|+|+|||.+|+.+|-.|.+. | .++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G-------~~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----G-------VKTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCCCC
Confidence 5799999999999999988652 6 368999987543
No 291
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=61.84 E-value=6.6 Score=39.87 Aligned_cols=36 Identities=17% Similarity=0.431 Sum_probs=28.5
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345789999999999999988764 364 688888764
No 292
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=61.79 E-value=7.1 Score=39.58 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.2
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.-+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888653 64 577777753
No 293
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=61.66 E-value=18 Score=32.94 Aligned_cols=50 Identities=16% Similarity=0.183 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++..+.+++....--.+++++|.|| |..|..+++++... | -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----G-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----C-------CEEEEEeCC
Confidence 34444455544444446789999994 87787777766432 5 257777753
No 294
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=61.64 E-value=23 Score=37.96 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..||.|+|+|.-|+.+|..+++. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999998763 5 367778765
No 295
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=61.50 E-value=17 Score=35.46 Aligned_cols=96 Identities=20% Similarity=0.145 Sum_probs=53.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 409 (590)
||+|.|| |-.|..+++.|++ .| .+++.+|++. +..+.+...+..+.. +..+..++.++++.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG- 77 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC-
Confidence 8999996 8888888887764 25 3688887742 111112211111211 11122357777774
Q ss_pred CCcEEEeccCCCCCC--------------CHHHHHHHHcCCCCcEEEecC
Q 007782 410 KPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|=+.+..+.. |..+++++.+..-+.+||.=|
T Consensus 78 -~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 -LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777665567887544
No 296
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=61.40 E-value=8.6 Score=33.88 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=27.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 357899999999999999988642 5 468888875
No 297
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=61.39 E-value=7.4 Score=37.45 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 479999999999999988764 253 278999985
No 298
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=61.28 E-value=7.3 Score=36.95 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=26.3
Q ss_pred CCCCccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 325 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 325 g~~l~d~riv~~GAG---sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..++++.++||.||+ -.|.++|+.+++ .| -+++++|++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecc
Confidence 356889999999984 345556665543 36 368888875
No 299
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.21 E-value=7.4 Score=37.11 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~l-vD~~ 374 (590)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 300
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=61.16 E-value=7 Score=37.97 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+|+|+|||.+|+..|..|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 578888763
No 301
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=61.13 E-value=7.6 Score=38.47 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=27.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
...+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 35789999999999999887754 25 3688998863
No 302
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=61.02 E-value=5.2 Score=37.45 Aligned_cols=92 Identities=15% Similarity=0.173 Sum_probs=51.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh----hcc-ccCCCCCHHHH-
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH-EHEPVNNLLDA- 405 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~----fA~-~~~~~~~L~e~- 405 (590)
||+|+|+|..|..+|+.|... | .++.++|++ .+ .+...... +-. +......|.++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~---~~~~l~~~~~~~~i~gd~~~~~~l~~a~ 62 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RE---LCEEFAKKLKATIIHGDGSHKEILRDAE 62 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HH---HHHHHHHHSSSEEEESCTTSHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HH---HHHHHHHHcCCeEEEcCCCCHHHHHhcC
Confidence 799999999999999988652 5 468888864 11 12111111 111 11111235554
Q ss_pred hcccCCcEEEeccCCCCCCCHHHHHHHHc-CCCCcEEEecCC
Q 007782 406 VKVIKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 446 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSN 446 (590)
++ +++++|-++... ..-..+..+++ .+..+-|++..|
T Consensus 63 i~--~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 63 VS--KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CC--TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred cc--cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 44 589998666533 22233444443 356666666655
No 303
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=61.00 E-value=25 Score=31.79 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=52.5
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh--chhhcc-ccCCCCCHHHHhc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 407 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~--k~~fA~-~~~~~~~L~e~V~ 407 (590)
||+|.|| |-.|..+++.|++ .| .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 8788888877764 25 3688877641 111111 011111 1111112 6676
Q ss_pred ccCCcEEEeccCCCCCC-------CHHHHHHHHcCCCCcEEEecC
Q 007782 408 VIKPTILIGSSGVGRTF-------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~F-------t~evv~~Ma~~~erPIIFaLS 445 (590)
. +|++|=+.+..... ++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 89999877764321 367888887665566776544
No 304
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=60.88 E-value=8.6 Score=38.41 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=28.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+..|+|+|||.+|+.+|-.|.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 56899999999999999988761 151 3689999876
No 305
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=60.70 E-value=7.7 Score=39.38 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=25.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 6 3677787643
No 306
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=60.63 E-value=8.9 Score=38.44 Aligned_cols=87 Identities=23% Similarity=0.260 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhh
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 392 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f 392 (590)
.++.-+.+++-.... .+++++|.|||..|...+.+... .|. ++++.+|+. ..| ++..++.
T Consensus 149 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l- 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY- 208 (343)
T ss_dssp HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT-
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh-
Confidence 344445666623333 88999999998777766654432 363 478888753 111 1111111
Q ss_pred cccc--CCCCCHHHHhcc---cCCcEEEeccC
Q 007782 393 AHEH--EPVNNLLDAVKV---IKPTILIGSSG 419 (590)
Q Consensus 393 A~~~--~~~~~L~e~V~~---vkPtvLIG~S~ 419 (590)
|... ....++.+.++. -+.|++|=+++
T Consensus 209 a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 209 ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 2210 111356665553 25788887766
No 307
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=60.45 E-value=4.5 Score=45.93 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=31.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 788999999999999999988764 76 799999987
No 308
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=60.19 E-value=28 Score=34.96 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=57.1
Q ss_pred ccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 007782 329 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 406 (590)
Q Consensus 329 ~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 406 (590)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+...+..+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 8788778777764 25 3688887752 111111111111211 111223577777
Q ss_pred cccCCcEEEeccCCCCC--C---------------CHHHHHHHHcCCCCcEEEecC
Q 007782 407 KVIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 445 (590)
+ ++|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988775432 1 235667776665567887544
No 309
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=60.14 E-value=8.6 Score=40.80 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.1
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999998653 53 58899875
No 310
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=60.13 E-value=8.9 Score=36.89 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=57.8
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhcc
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 408 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~ 408 (590)
.+|+|.|| |-.|..+++.|++.- .| .+++.+|++. .. ..+.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~-~~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LN-TDVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CS-CHHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cc-ccccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888888776520 12 3688887641 11 00110 111111 21222357788887
Q ss_pred cCCcEEEeccCCCCC---------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 118 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSS 118 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 789999988775421 1345677776655567887533
No 311
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=60.04 E-value=10 Score=35.25 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=39.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc-
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 409 (590)
++||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899998 5556556665543 25 3688888741 1 1211 1111111113466666655
Q ss_pred -CCcEEEeccCCCC
Q 007782 410 -KPTILIGSSGVGR 422 (590)
Q Consensus 410 -kPtvLIG~S~~~g 422 (590)
++|+||=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 7999998877543
No 312
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.94 E-value=10 Score=35.50 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=55.2
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 405 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 405 (590)
..-.+|+|.|| |-.|..+++.|++ .|- -++.+++++. ++...+...+..+.. |..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 33468999995 7777777776653 241 3677777652 111111111111111 22222457778
Q ss_pred hcccCCcEEEeccCCCCC--CCHHHHHHHHcCCCCcEEEecC
Q 007782 406 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++. .|++|=..+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 875 7999966554322 2566788887655555666444
No 313
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=59.64 E-value=5.4 Score=38.50 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=26.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45789999999999999988864 253 56788854
No 314
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=59.57 E-value=7.7 Score=40.55 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.7
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
||||+|+|.||+-.|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999887543 53 23688998764
No 315
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=59.36 E-value=10 Score=40.63 Aligned_cols=107 Identities=22% Similarity=0.285 Sum_probs=58.3
Q ss_pred cceEEEeCcChHHH-HHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGAGEAGT-GIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GAGsAg~-GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
-+||.|+|.|-+|+ |+|+++.+ .| -++...|.+= ....+.|.....++--. .+ .+-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~~---~~~~~~l~~~gi~~~~g----~~-~~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLAP---NSVTQHLTALGAQIYFH----HR-PENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSSC---CHHHHHHHHTTCEEESS----CC-GGGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECCC---CHHHHHHHHCCCEEECC----CC-HHHcC-
Confidence 37999999999999 58888865 36 3678888641 00000111111111100 11 12233
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhcccCC-cEEEecCC
Q 007782 409 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG-RAIFASGS 472 (590)
Q Consensus 409 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~wt~G-~aifAsGS 472 (590)
.+|.+|=.++.+ .=++++.++.. ..-|||= . +|-++.+.++ +.|-.|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~--~gi~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAARE--ARIPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHH--TTCCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHH--CCCCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 378888555555 45778877665 2446652 1 2333444444 46777887
No 316
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=59.28 E-value=8.2 Score=39.43 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=29.4
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
+..|||+|||.+|+..|-.|.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999888653 64 378999987653
No 317
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=59.24 E-value=8.1 Score=45.79 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.6
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.|+..||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57889999999999999999999876 86 799999987
No 318
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=59.11 E-value=7.5 Score=38.43 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999888652 63 68999987543
No 319
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=59.00 E-value=8.3 Score=40.22 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999977754 25 379999987
No 320
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=58.71 E-value=9.5 Score=38.28 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+|+|+|||.||+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999888653 64 577787654
No 321
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=58.54 E-value=8.3 Score=38.72 Aligned_cols=49 Identities=16% Similarity=0.126 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++..+.|++..+ - .+++|+|.|||..|..++.+... .|. ++++.+|+.
T Consensus 153 ~~~ta~~~l~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~ 201 (348)
T 2d8a_A 153 PLGNAVDTVLAGP-I-SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS 201 (348)
T ss_dssp HHHHHHHHHTTSC-C-TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC
T ss_pred HHHHHHHHHHhcC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC
Confidence 3344455664333 3 88999999999888777665542 363 468877753
No 322
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=58.49 E-value=9.7 Score=37.84 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 26 4689999864
No 323
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=58.48 E-value=7.7 Score=37.96 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|++.++||+|+|..|..-+++|+.+ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999888754 5 368888864
No 324
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=58.26 E-value=13 Score=38.33 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=30.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV 378 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~ 378 (590)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAERP 45 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSCC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCCc
Confidence 46899999999999999988753 53 13699999876443
No 325
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=58.20 E-value=8.7 Score=38.60 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
+..|||+|||.+|+.+|-.|.+ .|. ++.++|+....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 3579999999999999988865 363 68899987654
No 326
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=58.19 E-value=20 Score=33.58 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=24.8
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..++++++||.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 344445555544 36 358888875
No 327
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=58.12 E-value=12 Score=40.62 Aligned_cols=36 Identities=28% Similarity=0.400 Sum_probs=20.6
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+++++++||.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5788899999998655555555543 262 57887764
No 328
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=57.99 E-value=17 Score=33.28 Aligned_cols=94 Identities=16% Similarity=0.206 Sum_probs=52.3
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCC-CCCHHHHhcc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 408 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~-~~~L~e~V~~ 408 (590)
||+|.|| |-.|-.+++.|++ .| -++++++++. ++...+ .+..+.. +..+ ..++.++++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 7899995 6666666666643 25 4688888752 111111 1111111 2222 2356677774
Q ss_pred cCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987775421 1456777776555455666443
No 329
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=57.87 E-value=8.1 Score=41.24 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988753 5 367788865
No 330
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=57.84 E-value=13 Score=41.02 Aligned_cols=38 Identities=11% Similarity=0.256 Sum_probs=30.4
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
+++.+|||+|||.||+..|-.|.. .|+ ++.++|+.-..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~~ 58 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAFP 58 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCCC
Confidence 567899999999999999987764 263 68999998443
No 331
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=57.72 E-value=16 Score=36.76 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=58.1
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCc-hhchhhcc-ccCCCCCHH
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 403 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~-~~k~~fA~-~~~~~~~L~ 403 (590)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+..- .....+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466679999997 8888888777764 251 46888876421 1001121 00111111 111112466
Q ss_pred HHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcC-CCCcEEEecC
Q 007782 404 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 445 (590)
Q Consensus 404 e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 445 (590)
++++ ++|++|=+.+.... -|..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6666 69999988775431 145567777665 4567887544
No 332
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=57.41 E-value=9.5 Score=36.88 Aligned_cols=78 Identities=12% Similarity=0.120 Sum_probs=43.3
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-------cccCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 398 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-------~~~~~ 398 (590)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+......+. -|..+
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLP----E---TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECT----T---SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHhCCCeEEEECCCCC
Confidence 368889999999853 344444444444 36 368888875 1 12333222221 01112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007782 399 VNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 399 ~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566554 799999777654
No 333
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=57.25 E-value=26 Score=33.63 Aligned_cols=76 Identities=11% Similarity=0.038 Sum_probs=41.3
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHh
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 406 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V 406 (590)
++++++||.||++ ||...++..+.+ .| -+++++|++- .. +...+..+.. |..+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHHH
Confidence 5678999999853 344444444444 36 3688888751 11 1111111211 222223455556
Q ss_pred ccc-----CCcEEEeccCCC
Q 007782 407 KVI-----KPTILIGSSGVG 421 (590)
Q Consensus 407 ~~v-----kPtvLIG~S~~~ 421 (590)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 554 799999776653
No 334
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=57.03 E-value=8.9 Score=39.78 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.3
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|||.||+..|..|.+ .|.. .++.++|++
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988864 3641 368889876
No 335
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=56.83 E-value=42 Score=32.24 Aligned_cols=76 Identities=16% Similarity=0.271 Sum_probs=40.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
+|++.++||.||++ ||...++..+.+ .| -+++++|++. .+...... +.-|..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~~----~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYDH----IECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSEE----EECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceEE----EEecCCCHHHHHHHH
Confidence 46778999999853 444455555544 36 3688887752 11111111 111211223455555
Q ss_pred ccc-----CCcEEEeccCCC
Q 007782 407 KVI-----KPTILIGSSGVG 421 (590)
Q Consensus 407 ~~v-----kPtvLIG~S~~~ 421 (590)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 699999776653
No 336
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=56.81 E-value=16 Score=35.32 Aligned_cols=98 Identities=16% Similarity=0.294 Sum_probs=54.8
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 409 (590)
||+|.|| |-.|..+++.|++ .| .+++++|+.- ......+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 7677777776653 25 3577777621 111111111 111111 111223567778766
Q ss_pred CCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 410 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345677776655567887644
No 337
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=56.74 E-value=34 Score=32.46 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=41.8
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.++++.++||.||++ ||...++..+.+ .| -+++++|++- ...+.+. +..+.-|. ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468889999999853 344444444444 36 3588888753 0000010 00111111 2356666
Q ss_pred hccc-CCcEEEeccCCC
Q 007782 406 VKVI-KPTILIGSSGVG 421 (590)
Q Consensus 406 V~~v-kPtvLIG~S~~~ 421 (590)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6655 799999777643
No 338
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=56.73 E-value=11 Score=36.60 Aligned_cols=82 Identities=18% Similarity=0.217 Sum_probs=40.3
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHH
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLL 403 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~ 403 (590)
+.++.++++||.||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. |..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 444455555544 363 688887641 110111111111111 211223455
Q ss_pred HHhccc-----CCcEEEeccCCC
Q 007782 404 DAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 404 e~V~~v-----kPtvLIG~S~~~ 421 (590)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 555544 789999766643
No 339
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=56.72 E-value=11 Score=35.93 Aligned_cols=37 Identities=16% Similarity=0.289 Sum_probs=23.3
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|++.++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 47788999999843 334444444444 36 358888764
No 340
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=56.52 E-value=22 Score=36.14 Aligned_cols=104 Identities=21% Similarity=0.285 Sum_probs=57.0
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCC
Q 007782 305 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 384 (590)
Q Consensus 305 DiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~ 384 (590)
+.++.....++..+.|++..+.. .+++++|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554444566666777655543 57899999998777655444332 364 578777653
Q ss_pred Cchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEeccCCCCCCCHHHHHHHH
Q 007782 385 LQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSGVGRTFTKEVIEAMA 433 (590)
Q Consensus 385 l~~~k~~fA~~-------~~~~~~L~e~V~~---v---kPtvLIG~S~~~g~Ft~evv~~Ma 433 (590)
+.+..+++. .....++.+.++. . +.|++|=+++.+ ..-++.++.++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~ 275 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAK 275 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhc
Confidence 122233321 0112356666654 1 578888877633 12234444443
No 341
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=56.49 E-value=9.9 Score=39.36 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=27.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+|||+|||.||+..|..|...+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999876431 13 4677887754
No 342
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=56.38 E-value=9.3 Score=40.20 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988865 25 4689999764
No 343
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=56.36 E-value=11 Score=41.00 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998864 364 589999874
No 344
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=56.33 E-value=7.9 Score=37.63 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
...+|+|+|||.||+..|..+.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 456899999999999999988652 53 5788887
No 345
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=56.31 E-value=6.7 Score=37.40 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=23.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|+++++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 444445555444 36 258887764
No 346
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=56.17 E-value=9.5 Score=40.02 Aligned_cols=33 Identities=30% Similarity=0.549 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999988865 25 468999986
No 347
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=56.17 E-value=8.6 Score=40.30 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=28.4
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35789999999999999988854 25 3799999874
No 348
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.10 E-value=11 Score=39.20 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 46799999999999999887653 5 368999987
No 349
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=56.07 E-value=7.9 Score=39.95 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
..+|||+|||.||+..|..|.+.-... + .-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 357999999999999999987642110 0 047889988753
No 350
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=55.99 E-value=9.6 Score=40.16 Aligned_cols=38 Identities=18% Similarity=0.324 Sum_probs=27.9
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+..|..+.+.. ..|++. .++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~~----~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAEI----PELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCCC----CEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCCC----CcEEEEEcC
Confidence 48999999999999999987632 136420 138888876
No 351
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=55.95 E-value=7 Score=37.33 Aligned_cols=83 Identities=22% Similarity=0.330 Sum_probs=54.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
||+|.|| |-.|..+++.|++ .| .+++.+|+. .. ++. +..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~-D~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LL-DIT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TS-CTT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------cc-CCC-----------CHHHHHHHHHhcC
Confidence 8999997 8888877777653 24 368888771 11 122 1135777888778
Q ss_pred CcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 411 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 411 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988775531 034577777765554 887654
No 352
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=55.72 E-value=27 Score=33.16 Aligned_cols=77 Identities=13% Similarity=0.185 Sum_probs=40.3
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchh------hcc-ccCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAH-EHEPV 399 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~------fA~-~~~~~ 399 (590)
+++++++||.||++ ||...++..+.+ .| -+++++|++- .+ +...... +.. |....
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCCH
Confidence 57888999999853 344445555544 36 3588887642 11 2111111 111 11122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007782 400 NNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 400 ~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566554 799999766643
No 353
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=55.60 E-value=24 Score=37.77 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=32.6
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecCCCCCCCCCCHHHHhc
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 460 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEctpedA~~ 460 (590)
-+++|=.|+++--.|+++.+... ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 45777788888778888887765 445655 999988888876554
No 354
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=55.59 E-value=11 Score=35.66 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=26.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|+|.||+-.|..+.+. | .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----G-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 46799999999999999888652 5 368888875
No 355
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=55.55 E-value=9 Score=36.33 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=54.4
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 409 (590)
||+|.|| |-.|..+++.|++. ..| -+++.+|++. ++...+......+.. +..+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5899998 87887777776531 002 3678787641 110001111111111 11122357778875
Q ss_pred CCcEEEeccCCCC----CCCHHHHHHHHcCCCCcEEEecC
Q 007782 410 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998776421 23678899988766667887544
No 356
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=55.46 E-value=5.7 Score=40.48 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=52.6
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhc
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 407 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~ 407 (590)
.+..||.|+|+|..|...++.+.. +..|. +-+.++|++ . +......+.|--......++.|+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~---~~~~~~a~~~g~~~~~~~~~~~ll~ 84 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----A---GRAQAALDKYAIEAKDYNDYHDLIN 84 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----T---THHHHHHHHHTCCCEEESSHHHHHH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----H---HHHHHHHHHhCCCCeeeCCHHHHhc
Confidence 345799999999988766655532 11121 223466653 1 1122333333211122478999999
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 408 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
.-++|+++ +++.. .+..++++...+. .++|+.
T Consensus 85 ~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 85 DKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 87899988 55544 4555655554432 255554
No 357
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=55.02 E-value=9.7 Score=41.37 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.7
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 353 689999864
No 358
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=54.98 E-value=11 Score=36.08 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=54.7
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
-...||+|.|| |-.|..+++.|++ .| .+++.+|++ ..| +.+ ..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~d-----------~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-ITN-----------VLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TTC-----------HHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CCC-----------HHHHHHHH
Confidence 44678999987 7777777777653 24 357877764 111 221 12467777
Q ss_pred cccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 407 KVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 407 ~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76689999988875431 03566777766544 7888655
No 359
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=54.96 E-value=11 Score=38.05 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=26.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|+|+|||.+|+..|-.|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999888653 5 4678887763
No 360
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=54.87 E-value=11 Score=38.26 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=26.4
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+|+|+|||.+|+..|-.|.+. | .++.++|+..-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCCC
Confidence 799999999999999888652 5 36888887643
No 361
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=54.86 E-value=9.5 Score=40.14 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----G-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----S-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 457899999999999999888652 5 4699999863
No 362
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.78 E-value=9.7 Score=39.89 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=27.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+.+|+|+|||.||+..|..+.+ .|. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RGR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCCC
Confidence 4689999999999999987764 263 6889998654
No 363
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=54.75 E-value=10 Score=40.17 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=27.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
...|+|+|||.+|+++|..+.. .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999998865 264 588999864
No 364
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=54.54 E-value=5.3 Score=38.59 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=57.8
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCc--CCCchhchhhcc-ccCCCCCHHHH
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 405 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~--~~l~~~k~~fA~-~~~~~~~L~e~ 405 (590)
..+|+|.|| |-.|..+++.|++. | ..++..++++. ++. ..+......+.+ +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888887653 4 13677777641 110 001110111111 11222467788
Q ss_pred hcccCCcEEEeccCCCCC--------CCHHHHHHHHcCCCCcEEEecCC
Q 007782 406 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 446 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 446 (590)
++. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2556788887666667888 664
No 365
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=54.52 E-value=22 Score=35.35 Aligned_cols=108 Identities=23% Similarity=0.241 Sum_probs=57.2
Q ss_pred CCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc---cCCCcCCCchhc------hhhcc-
Q 007782 326 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI---VSSRKDSLQHFK------KPWAH- 394 (590)
Q Consensus 326 ~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv---~~~R~~~l~~~k------~~fA~- 394 (590)
.++++.+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+.... ..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999986 77777777777641 014 478888874210 000001111111 11111
Q ss_pred ccCCCCCHHHHhcccCCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 395 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 395 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+.....++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999977764431 134577777666555 888665
No 366
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=54.09 E-value=37 Score=32.73 Aligned_cols=38 Identities=24% Similarity=0.378 Sum_probs=26.3
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 2 LTLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 357889999999864 455555555555 36 368888876
No 367
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=54.06 E-value=12 Score=37.02 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=58.1
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch----------hhcc-c
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 395 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~----------~fA~-~ 395 (590)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+...+. .+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 55679999998 8788777777764 25 3688887742 110011211111 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 396 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 396 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+-|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 111235677777 59999988876431 1345677776655566887544
No 368
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=53.87 E-value=3.9 Score=43.37 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.3
Q ss_pred CccceEEEeCcChHHHHHHHHHHHH
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~ 352 (590)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998753
No 369
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.76 E-value=11 Score=38.82 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
++|||+|||.||+..|..|.+. . .| -++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999988762 0 12 4788888764
No 370
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=53.70 E-value=11 Score=39.28 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 3579999999999999977754 25 3689999873
No 371
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=53.57 E-value=11 Score=40.43 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 357899999999999999888653 5 3689999875
No 372
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=53.57 E-value=19 Score=34.23 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=40.8
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch-hchhhcc-ccCCCCCHHH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHEPVNNLLD 404 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-~k~~fA~-~~~~~~~L~e 404 (590)
++++.+++|.||+. ||...++..+.+ .|. +++++|++- ++ +.+.. .+..+.. |..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EGA-------LVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46788999999853 444445555544 363 588887651 11 10100 0001111 2122234555
Q ss_pred Hhccc-----CCcEEEeccCCC
Q 007782 405 AVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 405 ~V~~v-----kPtvLIG~S~~~ 421 (590)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 56554 799999776643
No 373
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=53.36 E-value=24 Score=35.78 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=28.8
Q ss_pred HHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 318 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 318 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+.|+......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 182 ~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 182 LGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333444467999999999877666554432 264 57888875
No 374
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=53.36 E-value=10 Score=36.13 Aligned_cols=37 Identities=30% Similarity=0.282 Sum_probs=22.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|+++++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36778999999843 333444444444 363 57777764
No 375
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.31 E-value=21 Score=34.16 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=25.2
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+++++||.||++ ||...++..+.++ | -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~~-G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAKA-G-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHHH-T-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHHC-C-------CEEEEEeCC
Confidence 458889999999864 4444455555443 6 358888774
No 376
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=53.20 E-value=14 Score=39.24 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 372 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD 372 (590)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 15 4689999
No 377
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=53.17 E-value=5.8 Score=42.61 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.||||+|+|.||+-.|+.|.. .+ -+|.|||++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 589999999999988876631 12 369999985
No 378
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=53.17 E-value=8.2 Score=36.14 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=25.0
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999843 444555555554 36 358888764
No 379
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=53.14 E-value=8.6 Score=37.83 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=60.3
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhch----------hhcc-c
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK----------PWAH-E 395 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~----------~fA~-~ 395 (590)
++..||+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+...+. .+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999997 8888888887764 25 36888877421 11011111110 1111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 396 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 396 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 112235777777 59999988875421 1344788888777778998643
No 380
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=52.95 E-value=31 Score=33.47 Aligned_cols=78 Identities=21% Similarity=0.286 Sum_probs=44.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc----------c
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------E 395 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----------~ 395 (590)
.+|++.++||.||++ ||...++..+.+ .| -+++++|++ . +.++..+..+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 368889999999864 444445555554 36 368888874 1 123333222211 1
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007782 396 HEPVNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 396 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
..+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 11122455666655 799999776654
No 381
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=52.91 E-value=14 Score=38.11 Aligned_cols=91 Identities=7% Similarity=0.077 Sum_probs=52.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc-
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 409 (590)
.||.|+|+|..|..+|..+... | .+++++|++- +.+...+.. ......++.|+++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~~---G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVDE---GFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHHT---TCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHHc---CCeeeCCHHHHHHhcc
Confidence 5899999999999999888653 5 3688887641 111111100 011124677766542
Q ss_pred -CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEEecC
Q 007782 410 -KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 -kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 445 (590)
.+|++| ++.... -++++++.++...+.-||.=.|
T Consensus 67 ~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 467666 443332 4667777766554444554443
No 382
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=52.76 E-value=11 Score=36.24 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=24.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+..|..+.+ .|. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987754 253 56777653
No 383
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=52.75 E-value=12 Score=36.34 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=24.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
--|+|+|||.||+-.|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 458999999999998877654 36 368888864
No 384
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=52.69 E-value=12 Score=39.02 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
-+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999877542 5 3689999873
No 385
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=52.53 E-value=11 Score=39.20 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.0
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
||.|+|+|..|..+|..+.+ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 358888874
No 386
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=52.45 E-value=42 Score=34.73 Aligned_cols=131 Identities=6% Similarity=-0.004 Sum_probs=84.4
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhC------CCCccceEEEeCcC
Q 007782 268 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHRFLFLGAG 339 (590)
Q Consensus 268 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g------~~l~d~riv~~GAG 339 (590)
+-.+| .++ |-+-.++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| +++++.||.++|-|
T Consensus 96 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 44567 554 3444453 45566667764 689998 55 3434556777777777766 37999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc---c---CCCCCHHHHhcccCCcE
Q 007782 340 EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAVKVIKPTI 413 (590)
Q Consensus 340 sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~---~---~~~~~L~e~V~~vkPtv 413 (590)
.- .+|+-++.++.+ .|+ +|.++-.+|+..+-. +.+...-+.+|.. + ....++.|+|+. .||
T Consensus 171 ~~--~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~-~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 MN--NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPI-KEVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp SS--HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCC-HHHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred Cc--chHHHHHHHHHH-cCC-------EEEEECChHhhhCCC-HHHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 52 578888887776 374 689999988853111 1122222233322 1 123689999997 999
Q ss_pred EEe
Q 007782 414 LIG 416 (590)
Q Consensus 414 LIG 416 (590)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 387
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=52.34 E-value=16 Score=35.80 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=44.6
Q ss_pred CCCCccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhh-----c-cc
Q 007782 325 GGTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-----A-HE 395 (590)
Q Consensus 325 g~~l~d~riv~~GAGs---Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f-----A-~~ 395 (590)
..+|+++++||.||++ .|..||+.+++ .| -+++++|++. ...+.+......+ . -|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QG-------AEVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CC-------CEEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468899999999963 44446666654 36 3588888751 1101111111111 0 11
Q ss_pred cCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007782 396 HEPVNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 396 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
.....++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 11223455666655 799999777654
No 388
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=52.33 E-value=23 Score=34.98 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=58.8
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh-----chhhcc-ccCCCC
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVN 400 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~-----k~~fA~-~~~~~~ 400 (590)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+...+... +..+.. +.....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 8888888777764 25 3688887742 111111100 111111 111223
Q ss_pred CHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007782 401 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 445 (590)
Q Consensus 401 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 445 (590)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57778887789999988875321 0234566665544 467888655
No 389
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=52.22 E-value=13 Score=39.86 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=28.9
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
-.+.+|||+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888753 64 688998864
No 390
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=52.09 E-value=15 Score=33.82 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=55.6
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHH
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 405 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~ 405 (590)
.+..+|+|.|| |-.|..+++.+++. |- ..++++++++. ++.+.+. .+..+.. +..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~-----~~-----g~~V~~~~r~~----~~~~~~~-~~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEG-----SD-----KFVAKGLVRSA----QGKEKIG-GEADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHT-----TT-----TCEEEEEESCH----HHHHHTT-CCTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhc-----CC-----CcEEEEEEcCC----CchhhcC-CCeeEEEecCCCHHHHHHH
Confidence 34578999996 77777777776542 20 14678777641 1000010 0011111 11122357777
Q ss_pred hcccCCcEEEeccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEecC
Q 007782 406 VKVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 406 V~~vkPtvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 445 (590)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 774 8999977664321 1 467778887665566777543
No 391
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=51.98 E-value=25 Score=35.18 Aligned_cols=86 Identities=19% Similarity=0.079 Sum_probs=54.5
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
..||+++|+ |..|--+++.+.+. |. +-++.+|.+.- +. + .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g~-~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---GT-T-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---TC-E-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---cc-e-------eC--CeeccCCHHHHhhc
Confidence 478999999 99887776665432 53 35677877411 00 1 01 11123578898875
Q ss_pred cCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 007782 409 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 441 (590)
Q Consensus 409 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 441 (590)
.+||+.|=+ +.+ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI~-tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIY-VPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEEC-CCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEe-cCH-HHHHHHHHHHHHCCCCEEE
Confidence 569988833 323 5889999988877666533
No 392
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=51.98 E-value=26 Score=33.78 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=49.1
Q ss_pred cceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcc
Q 007782 330 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 408 (590)
Q Consensus 330 d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~ 408 (590)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 368999998 8788878777754 25 367777753 111 0 1 111122223567788887
Q ss_pred cCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 409 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 409 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999987765421 03456777665443 6777544
No 393
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.95 E-value=14 Score=41.02 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999988753 5 3689999863
No 394
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=51.92 E-value=27 Score=33.46 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=23.4
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 29 ~l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 29 RWRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GGTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 36788999999743 444445555444 363 58888764
No 395
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=51.92 E-value=14 Score=37.11 Aligned_cols=56 Identities=21% Similarity=0.172 Sum_probs=34.1
Q ss_pred CchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 307 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 307 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++.....++..+.|++..+. -.+++|+|.|||..|...+.+.. . .|. ++++.+|+.
T Consensus 158 ~aa~~~~~~ta~~~l~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~ 213 (363)
T 3m6i_A 158 NGAMLEPLSVALAGLQRAGV-RLGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDID 213 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-CTTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEESC
T ss_pred HHHhhhHHHHHHHHHHHcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC
Confidence 34333344555666655543 35689999999877766554443 2 364 568877753
No 396
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=51.87 E-value=12 Score=40.01 Aligned_cols=38 Identities=21% Similarity=0.398 Sum_probs=28.5
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
..+|||+|||.||+..|-.|..... .| -++.++|+.-+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCCC
Confidence 4689999999999999988865310 25 36889998543
No 397
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.76 E-value=12 Score=39.15 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 46799999999999999888642 5 3689999874
No 398
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=51.75 E-value=15 Score=35.86 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=57.4
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCc-CCCchhch----------hhcc-ccC
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK-DSLQHFKK----------PWAH-EHE 397 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~-~~l~~~k~----------~fA~-~~~ 397 (590)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.-- ..|. ....+... .+.. +..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 68 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHN--AFRGGGSLPESLRRVQELTGRSVEFEEMDIL 68 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSS--SCBCSSSSBHHHHHHHHHHTCCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCc--ccccccccHHHHHHHHhccCCceEEEECCCC
Confidence 58999986 7788878777764 25 35888876411 0010 00111111 1111 111
Q ss_pred CCCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 398 PVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 398 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
...++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 69 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 69 DQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 12356777776679999988775421 1345777777666567888544
No 399
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.71 E-value=11 Score=39.13 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4579999999999999987754 25 368999986
No 400
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=51.71 E-value=11 Score=35.83 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=43.3
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-------cccCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHEP 398 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA-------~~~~~ 398 (590)
.++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+...+..+. -|..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 333444444444 36 3588888641 11222222211 11112
Q ss_pred CCCHHHHhccc-----CCcEEEeccCCC
Q 007782 399 VNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 399 ~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23455666655 799999777654
No 401
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=51.66 E-value=10 Score=39.63 Aligned_cols=33 Identities=21% Similarity=0.434 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4689999999999999988764 25 479999986
No 402
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=51.60 E-value=12 Score=40.18 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
..+|||+|||.||.-.|-.|..... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999998876420 24 36889998644
No 403
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=51.57 E-value=14 Score=38.40 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=29.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
..+|||+|||.||+..|..+.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 3689999999999999998865 364 237999987643
No 404
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=51.52 E-value=29 Score=35.24 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+....+.|++..+....+++++|.|||..|..++.+... .| | +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FG-----S--KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CC-----C--EEEEEeC
Confidence 334445667766655478999999999877776655532 36 2 5777765
No 405
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.50 E-value=11 Score=39.13 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----G-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 5799999999999999877642 5 378999986
No 406
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=51.45 E-value=15 Score=39.04 Aligned_cols=37 Identities=14% Similarity=0.247 Sum_probs=28.6
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCCc
Confidence 4899999999999999888653 21 2478999987543
No 407
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=51.43 E-value=14 Score=38.19 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHH
Q 007782 330 EHRFLFLGAGEAGTGIAELIALE 352 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~ 352 (590)
+--|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 45699999999999999988653
No 408
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=51.41 E-value=9.2 Score=40.25 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=26.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
.+|||+|||.||+..|-.|..... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999998876431 24 36888887643
No 409
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=51.24 E-value=72 Score=33.25 Aligned_cols=131 Identities=19% Similarity=0.235 Sum_probs=82.0
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHH
Q 007782 268 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGI 345 (590)
Q Consensus 268 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GI 345 (590)
+-.+| .++++ +--++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+..| +|++.||+++|-| . -+
T Consensus 121 vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HH
T ss_pred HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hh
Confidence 34456 55444 44443 45566666764 689998 44 2233456777776666665 5999999999998 2 37
Q ss_pred HHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccc-c---CCCCCHHHHhcccCCcEEEeccCC
Q 007782 346 AELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-H---EPVNNLLDAVKVIKPTILIGSSGV 420 (590)
Q Consensus 346 A~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S~~ 420 (590)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. + ....++.|+|+. .||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888777766 374 68888888874321 111112223332 1 123689999997 9999876543
No 410
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=51.11 E-value=15 Score=39.08 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 357899999999999999988653 21 257999998753
No 411
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=51.00 E-value=48 Score=31.29 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=40.8
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
+|++.++||.||+. ||...++..+.+ .| -+++++|++--+ .... -..+.-|..+..++.+++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~~ 65 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQVC 65 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHHH
Confidence 47788999999753 444445555544 36 358888775211 0010 001111212223455556
Q ss_pred ccc-----CCcEEEeccCCC
Q 007782 407 KVI-----KPTILIGSSGVG 421 (590)
Q Consensus 407 ~~v-----kPtvLIG~S~~~ 421 (590)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 66 QRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCcC
Confidence 544 799999776643
No 412
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=50.98 E-value=11 Score=39.80 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=28.8
Q ss_pred CCCchHHHHHHHHHHHHHH---hCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 305 DIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 305 DiQGTaaV~LAgll~A~r~---~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
..||-|+++.---++--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+...+
T Consensus 8 ~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 8 HHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -----------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 4466666655444432211 111112258999999999999999886531 13 479999987543
No 413
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=50.88 E-value=10 Score=37.22 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
...+|+|+|||.||+..|..+... |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 457899999999999999888652 53 57788854
No 414
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=50.85 E-value=12 Score=37.91 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=26.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..++||+|||.||+..|..+.+ .|. .-++.++|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 3689999999999999988754 353 2367888764
No 415
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=50.75 E-value=45 Score=31.95 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=53.0
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-ccCCCCCHHHHhccc
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 409 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-~~~~~~~L~e~V~~v 409 (590)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ......+ .....+.. +..+.. +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFV-NPSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhc-CCCceEEECccccHH-HHhhcCC-
Confidence 7999998 8888888887764 25 3678887641 1111101 11111111 212222 5555553
Q ss_pred CCcEEEeccCCCCC-C---------------CHHHHHHHHcCCCCcEEEecC
Q 007782 410 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 410 kPtvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 445 (590)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999987774321 1 235777777666678888655
No 416
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=50.67 E-value=13 Score=39.64 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=26.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988865 365 46666654
No 417
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=50.65 E-value=34 Score=33.89 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=31.1
Q ss_pred CchHHHHHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 307 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 307 QGTaaV~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
++...-.++..+.+.+..+ .-.+++++|.|||..|...+.++ .+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 4433333333444444443 44678999999998775544333 32 364 56666665
No 418
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.43 E-value=12 Score=39.58 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.3
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999888652 5 4689999874
No 419
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.37 E-value=13 Score=38.92 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=26.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999877653 5 479999984
No 420
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=50.36 E-value=9.1 Score=40.86 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=19.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHH
Q 007782 331 HRFLFLGAGEAGTGIAELIALEI 353 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~ 353 (590)
+-||++|||.+|+++|-.|.+..
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEEcccHHHHHHHHHHHhcC
Confidence 34999999999999998887653
No 421
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=50.24 E-value=29 Score=33.08 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=42.7
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc----------cc
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------EH 396 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----------~~ 396 (590)
++++.++||.||++ ||...++..+.+ .|. +++++|++. +.+...+..+.. |.
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EGF-------TVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TTC-------EEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999864 444555555554 363 688888741 123332222211 11
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCCC
Q 007782 397 EPVNNLLDAVKVI----KPTILIGSSGVG 421 (590)
Q Consensus 397 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 421 (590)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 1122455555554 789999766643
No 422
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=50.22 E-value=14 Score=38.78 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+..++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 46899999999999999888653 6 468899984
No 423
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=50.14 E-value=36 Score=33.77 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
...+.+++..+. -.+++++|+|||+.|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344566776654 4578999999998886554444322 23 46887776
No 424
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=50.00 E-value=23 Score=32.83 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=20.7
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+.+++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 5 ~k~vlVtGasg---giG~~~a~~l~~-~G~-------~V~~~~r~ 38 (234)
T 2ehd_A 5 KGAVLITGASR---GIGEATARLLHA-KGY-------RVGLMARD 38 (234)
T ss_dssp CCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 46799998743 444445555444 363 58888764
No 425
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=50.00 E-value=19 Score=34.43 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=24.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 40 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDIL 40 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999754 444445555544 36 358888764
No 426
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=49.98 E-value=35 Score=32.69 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=39.5
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHH
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 405 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~ 405 (590)
.++++.++||.||+. ||...++..+.+ .| -+++++|++. +.+... ..+.-|..+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 356778999999853 444455555554 36 3688887742 112220 0111121122344455
Q ss_pred hccc-----CCcEEEeccCCC
Q 007782 406 VKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 406 V~~v-----kPtvLIG~S~~~ 421 (590)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5543 589999766643
No 427
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=49.96 E-value=12 Score=38.85 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+-.|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5899999999999999887653 64 67888865
No 428
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.82 E-value=14 Score=38.54 Aligned_cols=35 Identities=31% Similarity=0.363 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+..++|+|||.||+..|..+.+ .| .++.++|+++-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCCC
Confidence 3579999999999999988864 26 37899996653
No 429
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=49.77 E-value=10 Score=39.09 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=47.1
Q ss_pred HHHHHHhCCCCcc-ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc
Q 007782 318 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 396 (590)
Q Consensus 318 l~A~r~~g~~l~d-~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~ 396 (590)
|+.-.+....+++ -||-|+|+|..|-.-++.+...-.....+. +-.+=+-++|++ . +......+.|--.
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~--~~~elvav~d~~----~---~~a~~~a~~~~~~- 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLP--KRPHLYALADQD----Q---AMAERHAAKLGAE- 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSS--SEEEEEEEECSS----H---HHHHHHHHHHTCS-
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhccccccccC--CCeEEEEEEcCC----H---HHHHHHHHHcCCC-
Confidence 3444455555665 699999999888665555544311100010 001123355542 1 1122222333110
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCCCCHHHH-HHHH
Q 007782 397 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVI-EAMA 433 (590)
Q Consensus 397 ~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv-~~Ma 433 (590)
.-..++.|.++.-++|+++ +++.. .+-.+++ ++|.
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1236899999988899877 56644 3444444 4454
No 430
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=49.69 E-value=15 Score=38.21 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 45799999999999999888653 5 468899986
No 431
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=49.59 E-value=14 Score=39.35 Aligned_cols=37 Identities=30% Similarity=0.434 Sum_probs=28.9
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35789999999999999988765 363 68889876443
No 432
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=49.59 E-value=15 Score=38.65 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=28.9
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999998764 20 125799999864
No 433
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=49.55 E-value=11 Score=40.95 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1363 688999864
No 434
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=49.43 E-value=13 Score=39.58 Aligned_cols=25 Identities=28% Similarity=0.434 Sum_probs=21.1
Q ss_pred CCccceEEEeCcChHHHHHHHHHHH
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIAL 351 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~ 351 (590)
.-++..|+|+|||.+|+..|-.|..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~ 32 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL 32 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH
Confidence 3456789999999999999988865
No 435
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=49.36 E-value=34 Score=32.83 Aligned_cols=38 Identities=37% Similarity=0.519 Sum_probs=24.8
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 458889999999753 444445555544 36 358888764
No 436
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=49.35 E-value=27 Score=33.19 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=24.6
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458889999999854 333444444444 36 368888764
No 437
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=49.24 E-value=25 Score=35.25 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=35.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCcc--ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 308 GTASVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 308 GTaaV~LAgll~A~r~~g~~l~d--~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++-...++..+.|+...+..-.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 137 a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 137 GAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp TTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 33334455556666433444456 89999998 8888777666543 363 478888763
No 438
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=49.18 E-value=8.3 Score=38.68 Aligned_cols=90 Identities=16% Similarity=0.143 Sum_probs=49.7
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- ..-..++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----I---EGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----H---HHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665543 1121 223356653 1 11222222221 122368999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
+|+++ +++.. ....++++...+.. ++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~g-k~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVERG-IPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHcC-CcEEE
Confidence 89887 44434 45555555544333 45553
No 439
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=49.14 E-value=9.7 Score=38.41 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=29.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999988754 5 358888864
No 440
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=49.10 E-value=57 Score=31.57 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=41.8
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc----------ccc
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA----------HEH 396 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA----------~~~ 396 (590)
+|+++++||.||++ ||...++..+.+ .|. +++++|++ . +.+........ -|.
T Consensus 30 ~l~gk~~lVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 30 GLRGRTALVTGSSR---GIGAAIAEGLAG-AGA-------HVILHGVK----P---GSTAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TTC-------EEEEEESS----T---TTTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEcCC----H---HHHHHHHHHHHhcCCeEEEEEecC
Confidence 57788999999853 444445555544 363 68888874 1 12333222221 122
Q ss_pred CCCCCHHHHhccc----CCcEEEeccCC
Q 007782 397 EPVNNLLDAVKVI----KPTILIGSSGV 420 (590)
Q Consensus 397 ~~~~~L~e~V~~v----kPtvLIG~S~~ 420 (590)
.+..++.++++.+ +.|+||=..+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 92 SEAGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TSTTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2223445555443 79999976664
No 441
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=48.93 E-value=10 Score=37.71 Aligned_cols=89 Identities=18% Similarity=0.229 Sum_probs=50.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG----NADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhh----CCCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 589999999988776665543 1121 223356653 1 11222222221 12 678999999777
Q ss_pred CcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 411 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 411 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
+|+++ +++.+ ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44434 4555555554333 355553
No 442
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=48.87 E-value=28 Score=34.73 Aligned_cols=31 Identities=29% Similarity=0.502 Sum_probs=24.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+||-|+|-|..|.++|..|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 6899999999999999998763 63 5777775
No 443
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=48.75 E-value=25 Score=33.37 Aligned_cols=80 Identities=10% Similarity=0.083 Sum_probs=43.3
Q ss_pred CCCccceEEEeCcCh---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhh-------c-c
Q 007782 326 GTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-------A-H 394 (590)
Q Consensus 326 ~~l~d~riv~~GAGs---Ag~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~f-------A-~ 394 (590)
.++++.++||.||+. .|..+|+.+++ .|. +++++|+.. ...+.+......+ . -
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 45556666653 363 588887752 1001111111111 0 1
Q ss_pred ccCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007782 395 EHEPVNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 395 ~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
|..+..++.++++.+ ++|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222223456666655 789999777654
No 444
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=48.71 E-value=19 Score=36.33 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
.++..+.|++..+. -.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444556654443 356899999999777666554432 363 57888875
No 445
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=48.66 E-value=13 Score=39.21 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=61.4
Q ss_pred cceEEEeC-cChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc--CC-------CcccCCCcCCCchhchhhccccCCC
Q 007782 330 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SK-------GLIVSSRKDSLQHFKKPWAHEHEPV 399 (590)
Q Consensus 330 d~riv~~G-AGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD--~~-------GLv~~~R~~~l~~~k~~fA~~~~~~ 399 (590)
-.||.|+| ||..|..+|-+|+.. ++--| ...+.|+| .+ |... | |.+-..+|.+...-.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~e--~~~l~L~d~d~~~~~~~~~G~am----D-L~h~~~p~~~~v~i~ 99 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFGQ--DQPIALKLLGSERSFQALEGVAM----E-LEDSLYPLLREVSIG 99 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTCT--TCCEEEEEECCGGGHHHHHHHHH----H-HHTTTCTTEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCCC--CceeEEEecCccchhhhhHHHHH----h-HHhhhhhhcCCcEEe
Confidence 36999999 699999988877642 44110 11255544 32 2211 1 333333443322122
Q ss_pred CCHHHHhcccCCcEEEeccCCC---CC-----------CCHHHHHHHHcC-CCCcEEEecCCCC
Q 007782 400 NNLLDAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPT 448 (590)
Q Consensus 400 ~~L~e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt 448 (590)
.+..++++. .|++|=+.+.+ |- .=+++++.++++ +..-||+-.|||.
T Consensus 100 ~~~y~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 100 IDPYEVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp SCHHHHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cCCHHHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 456788887 88877454433 31 113455566776 7889999999997
No 446
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=48.52 E-value=18 Score=35.23 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=39.3
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhc-----------
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA----------- 393 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA----------- 393 (590)
..+++++++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3568899999999854 444444444444 36 3588887741 11222111110
Q ss_pred cccCCCCCHHHHhccc-----CCcEEEeccCCC
Q 007782 394 HEHEPVNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 394 ~~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
-|..+..++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1111223455566655 799999777654
No 447
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=48.50 E-value=38 Score=33.71 Aligned_cols=79 Identities=19% Similarity=0.331 Sum_probs=51.1
Q ss_pred eEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhcccC
Q 007782 332 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 410 (590)
Q Consensus 332 riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~vk 410 (590)
||+|.|| |-.|-.+++.|++. |. -+++.+|+. .+..+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888887653 42 256666654 011346677765
Q ss_pred CcEEEeccCCCCC------------CCHHHHHHHHcCCCC-cEEEecC
Q 007782 411 PTILIGSSGVGRT------------FTKEVIEAMASFNEK-PLILALS 445 (590)
Q Consensus 411 PtvLIG~S~~~g~------------Ft~evv~~Ma~~~er-PIIFaLS 445 (590)
+|++|=+.+..+. .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 8999866554321 246788888766555 6777544
No 448
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=48.50 E-value=10 Score=37.39 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.+|+..|..|.+.. ..| -++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999998886410 024 368888876
No 449
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=48.40 E-value=31 Score=33.49 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=56.9
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch----hchhhcc-ccCCCCC
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH----FKKPWAH-EHEPVNN 401 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~----~k~~fA~-~~~~~~~ 401 (590)
-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+.. ....+.. +..+..+
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 77 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACS 77 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHH
Confidence 45678999997 7777777776654 25 36888877421 000000100 0111111 1112235
Q ss_pred HHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCC-CCcEEEecC
Q 007782 402 LLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 445 (590)
Q Consensus 402 L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 445 (590)
+.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7788888899999988775431 1235667776655 367887544
No 450
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=48.39 E-value=13 Score=35.75 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=24.2
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..|+|+|||.||+-.|..+.+ .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999988866643 364 57788864
No 451
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=48.22 E-value=16 Score=38.15 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=27.6
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----G-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 45799999999999999888652 5 3799999853
No 452
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=48.21 E-value=35 Score=34.38 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=28.5
Q ss_pred HHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 318 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 318 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+.++......-.+++|+|.|||..|...+.+... .|. ++++.+|+
T Consensus 179 ~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~-----~Ga------~~Vi~~~~ 223 (373)
T 2fzw_A 179 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV-----AGA------SRIIGVDI 223 (373)
T ss_dssp HHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 3344333344467899999999877766655433 263 46888875
No 453
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=48.18 E-value=13 Score=39.43 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+..|+|+|||.||+..|-.|.+ .|+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~-----~G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLAR-----QGV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 5689999999999999988864 364 578888763
No 454
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=48.03 E-value=16 Score=34.76 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=24.3
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 357889999999853 344444444444 363 58887764
No 455
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=48.01 E-value=36 Score=34.42 Aligned_cols=44 Identities=16% Similarity=0.058 Sum_probs=27.9
Q ss_pred HHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 319 AALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 319 ~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
.++......-.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 181 ~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 224 (373)
T 1p0f_A 181 GAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA-----AGA------SRIIGVGT 224 (373)
T ss_dssp HHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHH-----HTC------SEEEEECS
T ss_pred HHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 334333344457899999999877766655432 263 46888875
No 456
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=47.96 E-value=15 Score=37.25 Aligned_cols=44 Identities=23% Similarity=0.144 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 318 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 318 l~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+.|+...+.--.+++++|.|+|..|...+.+... .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 3444333444467999999999777666544432 362 5777765
No 457
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=47.81 E-value=28 Score=32.66 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=38.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc-
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 409 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v- 409 (590)
.++||.||+. ||...++..+.+ .| -+++++|++- . .+.. .+.-|.....++.++++.+
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~ 60 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhC
Confidence 3688998753 444455555544 36 3588887641 1 1211 1111111123466677665
Q ss_pred -CCcEEEeccCCC
Q 007782 410 -KPTILIGSSGVG 421 (590)
Q Consensus 410 -kPtvLIG~S~~~ 421 (590)
++|+||=..+..
T Consensus 61 ~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 61 KGMDGLVLCAGLG 73 (257)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 789999777654
No 458
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=47.78 E-value=26 Score=33.50 Aligned_cols=38 Identities=24% Similarity=0.462 Sum_probs=24.4
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 46 (267)
T 1iy8_A 9 TRFTDRVVLITGGGS---GLGRATAVRLAA-EG-------AKLSLVDVS 46 (267)
T ss_dssp -CCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 457889999999753 444445555544 36 358888764
No 459
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=47.73 E-value=11 Score=35.86 Aligned_cols=77 Identities=21% Similarity=0.254 Sum_probs=41.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc-------ccCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-------EHEPV 399 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~-------~~~~~ 399 (590)
+++++++||.||++ ||...++..+.+ .|. +++++|++- +.+......+.. |..+.
T Consensus 6 ~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 67 (248)
T 3op4_A 6 NLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTNP 67 (248)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCCH
Confidence 57889999999864 444445555544 363 577777641 112222211111 11122
Q ss_pred CCHHHHhccc-----CCcEEEeccCCC
Q 007782 400 NNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 400 ~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
.++.++++.+ ++|+||=..+..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 68 ESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556544 799999777654
No 460
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=47.72 E-value=17 Score=34.52 Aligned_cols=37 Identities=24% Similarity=0.432 Sum_probs=23.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++++.++||.||+. ||...++..+.+ .|. +++++|++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AGA-------TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 47788999999753 444445555544 363 58888764
No 461
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=47.45 E-value=16 Score=39.77 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
...|||+|+|.+|+++|-.+.. .|+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~-----rG~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAA-----SGI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCCC
Confidence 4679999999999999988865 364 588998764
No 462
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=47.31 E-value=27 Score=34.93 Aligned_cols=44 Identities=25% Similarity=0.263 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 317 VVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 317 ll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
.+.|++.. ..-.+++++|.|| |..|..++.++.. .| -+++.+|+
T Consensus 158 a~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 35566544 2335789999999 7778777766543 35 26887775
No 463
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=47.26 E-value=12 Score=36.87 Aligned_cols=34 Identities=21% Similarity=0.492 Sum_probs=27.5
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
....|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 3578999999999999998875 1 5 3688999874
No 464
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=47.15 E-value=27 Score=34.08 Aligned_cols=77 Identities=16% Similarity=0.256 Sum_probs=41.1
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcc----------cc
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----------EH 396 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~----------~~ 396 (590)
++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+......+.. |.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46778999999864 444445555544 36 3688887641 112222222111 11
Q ss_pred CCCCCHHHHhccc-----CCcEEEeccCCC
Q 007782 397 EPVNNLLDAVKVI-----KPTILIGSSGVG 421 (590)
Q Consensus 397 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 421 (590)
.+..++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1112455666655 799999776653
No 465
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.14 E-value=12 Score=38.18 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 377 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv 377 (590)
..++||+|+|.||+..|..+.+ .| ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-----~g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-----TY--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-----TS--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh-----cC--------CEEEEECCCCC
Confidence 4689999999999999988842 12 79999987543
No 466
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=47.07 E-value=18 Score=36.94 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=27.4
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCCC
Confidence 68999999999999998886520 14 3688999863
No 467
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=47.02 E-value=26 Score=32.52 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=23.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 4 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 4 KLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred ccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 57788999999843 444445555544 36 358888764
No 468
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=47.02 E-value=13 Score=38.48 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=27.8
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 376 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GL 376 (590)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~-----~G-------~~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAK-----LG-------KSVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHh-----CC-------CCEEEEeCCCC
Confidence 4579999999999999887764 36 36889998653
No 469
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=46.97 E-value=33 Score=35.00 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 314 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 314 LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
++..+.|++. ...-.+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 171 ~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk-~----~Ga------~~Vi~~~~ 218 (398)
T 1kol_A 171 LPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASAR-L----LGA------AVVIVGDL 218 (398)
T ss_dssp HHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred HHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHH-H----CCC------CeEEEEcC
Confidence 4445566663 33346789999999987766655443 2 363 56887775
No 470
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=46.95 E-value=12 Score=39.62 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=27.8
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999887753 364 688888875
No 471
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=46.93 E-value=34 Score=33.98 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=56.3
Q ss_pred ceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchh----------chhhcc-ccCC
Q 007782 331 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----------KKPWAH-EHEP 398 (590)
Q Consensus 331 ~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~----------k~~fA~-~~~~ 398 (590)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ....+... +..+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777777754 25 3688887752100 00112211 111111 1112
Q ss_pred CCCHHHHhcccCCcEEEeccCCCCC----------------CCHHHHHHHHcCCC---CcEEEecC
Q 007782 399 VNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE---KPLILALS 445 (590)
Q Consensus 399 ~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e---rPIIFaLS 445 (590)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888899999988775421 12345666655443 56787544
No 472
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=46.92 E-value=16 Score=38.33 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=27.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|||+|||.||+..|..+.+ .|. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~-----~G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAAD-----EGL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CCC-------eEEEEeCCC
Confidence 4589999999999999977754 253 589999853
No 473
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=46.86 E-value=17 Score=38.34 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=19.5
Q ss_pred cceEEEeCcChHHHHHHHHHHH
Q 007782 330 EHRFLFLGAGEAGTGIAELIAL 351 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~ 351 (590)
..+|+|+|||.||+..|..|.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~ 25 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHD 25 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHH
Confidence 4579999999999999998875
No 474
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=46.75 E-value=32 Score=33.89 Aligned_cols=38 Identities=18% Similarity=0.269 Sum_probs=25.0
Q ss_pred CCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 326 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 326 ~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|++.++||.||+. ||...|+..+.+ .| -+++++|++
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 74 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARS 74 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECC
Confidence 457889999999854 344445555444 36 368888875
No 475
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=46.75 E-value=7.8 Score=39.83 Aligned_cols=89 Identities=16% Similarity=0.198 Sum_probs=50.3
Q ss_pred ceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 331 HRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 331 ~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
.||.|+|+| .+|...+..+... .++ +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~~------~l~av~d~~-------~~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH----PDA------QIVAACDPN-------EDVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC----TTE------EEEEEECSC-------HHHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC----CCe------EEEEEEeCC-------HHHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 8887777666431 121 234456653 11122222233 122347899999988
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEE
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 441 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 441 (590)
++|+++ +++.+ .+..++++...+. -++|+
T Consensus 64 ~vD~V~-i~tp~-~~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPH-QFHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCG-GGHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCc-HHHHHHHHHHHHC-CCcee
Confidence 899998 55544 3455555543332 34554
No 476
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=46.72 E-value=15 Score=38.50 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=27.6
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+.+++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 356899999999999999888653 5 468899965
No 477
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=46.70 E-value=34 Score=32.56 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=23.0
Q ss_pred CCccceEEEeCcC-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAG-sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+++.++||.||+ ..|..+|+.+ .+ .|. +++++|++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l----~~-~G~-------~V~~~~r~ 62 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKL----GS-LGA-------RVVLTARD 62 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHH----HH-TTC-------EEEEEESC
T ss_pred ccCCCEEEEECCCChHHHHHHHHH----HH-CCC-------EEEEEECC
Confidence 4678899999974 3344444444 43 363 58888774
No 478
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=46.63 E-value=16 Score=37.41 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=27.2
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+.+|+|+|||.+|+..|..|.+ .| .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-----~g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-----KG-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-----TT-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEEecC
Confidence 4689999999999999988864 24 4788888753
No 479
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=46.62 E-value=52 Score=31.72 Aligned_cols=101 Identities=18% Similarity=0.063 Sum_probs=56.7
Q ss_pred CCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCch-------hchhhc--ccc
Q 007782 327 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-------FKKPWA--HEH 396 (590)
Q Consensus 327 ~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~-------~k~~fA--~~~ 396 (590)
.+++.+|+|.|| |-.|..+++.|++ .| .+++.+|++- ++.+.+.. .+..+. -+.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~D~ 71 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLE-----HG-------YKVRGTARSA----SKLANLQKRWDAKYPGRFETAVVEDM 71 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSH----HHHHHHHHHHHHHSTTTEEEEECSCT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCCc----ccHHHHHHHhhccCCCceEEEEecCC
Confidence 356789999998 8888888877764 25 3577777641 00000100 011111 122
Q ss_pred CCCCCHHHHhcccCCcEEEeccCCCCC-------------CCHHHHHHHHc-CCCCcEEEecC
Q 007782 397 EPVNNLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMAS-FNEKPLILALS 445 (590)
Q Consensus 397 ~~~~~L~e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~-~~erPIIFaLS 445 (590)
....++.++++ ++|++|=+.+.... -|..+++++.+ ..-+.|||.=|
T Consensus 72 ~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 72 LKQGAYDEVIK--GAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp TSTTTTTTTTT--TCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred cChHHHHHHHc--CCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 22245666666 59999988775431 13456666653 34467888655
No 480
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.49 E-value=24 Score=34.50 Aligned_cols=37 Identities=24% Similarity=0.340 Sum_probs=23.9
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EGA-------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECCSC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 57889999999854 344444454444 363 58877764
No 481
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=46.49 E-value=18 Score=35.64 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.2
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..+.-|+|+|||.||+-.|-.+.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3467799999999999999888653 2353 67888875
No 482
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=46.23 E-value=13 Score=37.86 Aligned_cols=96 Identities=13% Similarity=0.100 Sum_probs=52.1
Q ss_pred CccceEEEeC-cChHHHH-HH----HHHHHHHHHhcCCChhhhcCc----EEEEcCCCcccCCCcCCCchhchhhccc--
Q 007782 328 LAEHRFLFLG-AGEAGTG-IA----ELIALEISKQTKAPVEETRKK----ICLVDSKGLIVSSRKDSLQHFKKPWAHE-- 395 (590)
Q Consensus 328 l~d~riv~~G-AGsAg~G-IA----~li~~~~~~~~G~s~eeA~~~----i~lvD~~GLv~~~R~~~l~~~k~~fA~~-- 395 (590)
.+..||.|+| +|..|.+ .+ +.+.. ..++.... ... +.++|++ .+ ..+.+|+.
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~-~~~~~~~~av~~~~-------~~----~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKN-GDRIMPDPILVGRS-------AE----KVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTT-SCEEEEEEEEECSS-------SH----HHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecC-CcccceeeEEEcCC-------HH----HHHHHHHHhC
Confidence 3456899999 9999987 66 44432 22221100 011 1244432 11 12233332
Q ss_pred cCC-CCCHHHHhcccCCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 396 HEP-VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 396 ~~~-~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
.+. ..++.|.++.-++|+++ +.+.. .+..+++++..+. .++|+.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 112 37899999988899887 55544 5666666554433 356554
No 483
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=46.17 E-value=47 Score=33.48 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=24.0
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+++++|.|||..|..++.++.. .| | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-----~G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-----YG-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-----HT-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC
Confidence 8999999998777766665543 25 2 68888764
No 484
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=46.06 E-value=18 Score=37.80 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.3
Q ss_pred CccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 328 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 328 l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
-...+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 3467999999999999999888653 5 368888876
No 485
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=45.98 E-value=1.3e+02 Score=30.90 Aligned_cols=129 Identities=14% Similarity=0.145 Sum_probs=80.8
Q ss_pred HHHhcCCCeeeeeecCCCchHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCCc-cceEEEeCcChHHHH
Q 007782 268 VKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLGAGEAGTG 344 (590)
Q Consensus 268 v~~~fGp~~lIqfEDf~~~~Af~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~A~r~~g~~l~-d~riv~~GAGsAg~G 344 (590)
+-.+| .++ |-+-.++ +.+.+.|.+|- ++||.| || .-=-.=+||=++.-.+.. ++++ +.||.++|-|. -
T Consensus 87 vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD~~---~ 157 (307)
T 3tpf_A 87 VIGAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGDSN---N 157 (307)
T ss_dssp HHHHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESCSS---H
T ss_pred HHHHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC---c
Confidence 34456 544 3344444 45666677765 689998 54 333345666666655544 4799 99999999974 4
Q ss_pred HHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhcccc----CCCCCHHHHhcccCCcEEEecc
Q 007782 345 IAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGSS 418 (590)
Q Consensus 345 IA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLIG~S 418 (590)
+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|+. .||+.-..
T Consensus 158 va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvyt~~ 222 (307)
T 3tpf_A 158 MCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVVITDT 222 (307)
T ss_dssp HHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEEECC
T ss_pred cHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEEecC
Confidence 88888887766 374 68888888874321 1111122333321 123689999997 99998654
No 486
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=45.93 E-value=40 Score=34.04 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
.++..+.|+......-.+++|+|+|+|..|...+.+... .|. ++++.+|+
T Consensus 174 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-----~Ga------~~Vi~~~~ 223 (371)
T 1f8f_A 174 GIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKV-----CGA------SIIIAVDI 223 (371)
T ss_dssp HHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHH-----HTC------SEEEEEES
T ss_pred hHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEECC
Confidence 333344455333334457899999999877766655432 263 46887775
No 487
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=45.82 E-value=19 Score=34.31 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=24.2
Q ss_pred CccceEEEeCcC---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 328 LAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 328 l~d~riv~~GAG---sAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++++++||.||+ -.|..+|+.+++ .|. +++++|++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCc
Confidence 678899999985 455556665543 363 58888875
No 488
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=45.79 E-value=52 Score=33.11 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcC
Q 007782 315 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 373 (590)
Q Consensus 315 Agll~A~r~~g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~ 373 (590)
+..+.+++.. .--.+++++|.|||..|...+.+... .|. +++.+|+
T Consensus 166 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~qlak~-----~Ga-------~Vi~~~~ 211 (360)
T 1piw_A 166 LTVYSPLVRN-GCGPGKKVGIVGLGGIGSMGTLISKA-----MGA-------ETYVISR 211 (360)
T ss_dssp HHHHHHHHHT-TCSTTCEEEEECCSHHHHHHHHHHHH-----HTC-------EEEEEES
T ss_pred HHHHHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcC
Confidence 3345566553 33357899999999888776655543 262 4888875
No 489
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=45.76 E-value=31 Score=34.18 Aligned_cols=50 Identities=12% Similarity=-0.073 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhCCCCccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 313 VLAGVVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 313 ~LAgll~A~r~~g~~l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.++..+.+++..+..-.+++++|.|| |..|..++.++.. .| -+++.+|+.
T Consensus 129 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------~~Vi~~~~~ 179 (333)
T 1wly_A 129 KGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARH-----LG-------ATVIGTVST 179 (333)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 34444555654444456789999996 8888888776653 25 258877764
No 490
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=45.75 E-value=14 Score=40.12 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=27.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
+--|||+|||.+|+++|..+.. .|+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~-----~G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQV-----RGI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CCC-------cEEEEECC
Confidence 4679999999999999988764 374 58888886
No 491
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=45.72 E-value=19 Score=33.56 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=23.2
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 8 ~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 8 RLDGKCAIITGAGA---GIGKEIAITFAT-AG-------ASVVVSDIN 44 (255)
T ss_dssp CCTTCEEEETTTTS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCcc---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 57788999999742 333444444444 35 358888764
No 492
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=45.67 E-value=42 Score=31.75 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCCCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 325 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 325 g~~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
..++++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999853 444445555544 36 368888764
No 493
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=45.50 E-value=29 Score=34.27 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=53.4
Q ss_pred CccceEEEeCc-ChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHh
Q 007782 328 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 406 (590)
Q Consensus 328 l~d~riv~~GA-GsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V 406 (590)
++..+|+|.|| |-.|..+++.|++. |. .+++++|+..--. ....+.... +.-+......+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~------~~V~~~~r~~~~~--~~~~~~~~~--~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDK-----GI------TDILVVDNLKDGT--KFVNLVDLN--IADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT-----TC------CCEEEEECCSSGG--GGGGTTTSC--CSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-----CC------cEEEEEecCCCcc--hhhcccCce--EeeecCcHHHHHHHH
Confidence 55678999998 88888887777642 51 4677777642100 000111100 111111112355555
Q ss_pred ccc---CCcEEEeccCCCCC--------------CCHHHHHHHHcCCCCcEEEecC
Q 007782 407 KVI---KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 445 (590)
Q Consensus 407 ~~v---kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 445 (590)
+.. ++|++|=+.+.... -|..+++++.+..- .+||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 69999988775532 03457777765544 7887544
No 494
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.49 E-value=17 Score=40.72 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=28.2
Q ss_pred ccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 329 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 329 ~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
...+|||+|||.||+..|..+.. .| .++.++|+..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~-----~G-------~~Vtlie~~~ 422 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME-----SG-------YTVHLTDTAE 422 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 34789999999999999998865 25 3589999863
No 495
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=45.46 E-value=38 Score=32.34 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.8
Q ss_pred CCccceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCC
Q 007782 327 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 375 (590)
Q Consensus 327 ~l~d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~G 375 (590)
+|+++++||.||++ ||...++..+.+ .| -+++++|+..
T Consensus 7 ~l~gk~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~~~~ 44 (287)
T 3pxx_A 7 RVQDKVVLVTGGAR---GQGRSHAVKLAE-EG-------ADIILFDICH 44 (287)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECCS
T ss_pred ccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CeEEEEcccc
Confidence 57889999999864 444455555544 36 3688888763
No 496
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=45.37 E-value=13 Score=37.52 Aligned_cols=91 Identities=18% Similarity=0.141 Sum_probs=50.1
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCCCcccCCCcCCCchhchhhccccCCCCCHHHHhccc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 409 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V~~v 409 (590)
..||.|+|+|..|...++.+. +..|. +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~----~~~~~------~lvav~d~~-------~~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT----KSEKL------KLVTCYSRT-------EDKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT----TCSSE------EEEEEECSS-------HHHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHH----hCCCc------EEEEEECCC-------HHHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 368999999997765554442 21121 223456653 11122222222 123357899999877
Q ss_pred CCcEEEeccCCCCCCCHHHHHHHHcCCCCcEEE
Q 007782 410 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 442 (590)
Q Consensus 410 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 442 (590)
++|+++ +++.. ....++++...+. .++|+.
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 95 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCARS-GKHIYV 95 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHHc-CCEEEE
Confidence 899888 44434 4556665554433 355554
No 497
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=45.27 E-value=20 Score=35.38 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=26.8
Q ss_pred eEEEeCcChHHHHHHHHHHHHHHHhcCCChhhh-cCcEEEEcCCC
Q 007782 332 RFLFLGAGEAGTGIAELIALEISKQTKAPVEET-RKKICLVDSKG 375 (590)
Q Consensus 332 riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA-~~~i~lvD~~G 375 (590)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECCC
Confidence 589999999999999888653 3100 0 14788999873
No 498
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=45.26 E-value=17 Score=35.76 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=57.1
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC--CcccCCCcCCCchhchhhccccCCCCCHHHHh-c
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV-K 407 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~--GLv~~~R~~~l~~~k~~fA~~~~~~~~L~e~V-~ 407 (590)
.||.|+|+|+-|..+|..|... | .+++++|+. ++-.... +. .+... -..+..+++ +
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~-~g------~~~~~--~~~~~~~~~~~ 61 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS-----L-------PHTTLIGRHAKTITYYTV-PH------APAQD--IVVKGYEDVTN 61 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-----C-------TTCEEEESSCEEEEEESS-TT------SCCEE--EEEEEGGGCCS
T ss_pred cEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEEeccCcEEEEec-CC------eeccc--eecCchHhcCC
Confidence 4899999999999999988754 5 357777764 1110000 00 00000 001223333 2
Q ss_pred ccCCcEEEeccCCCCCCCHHHHHHHHcC-CCCcEEEecCCCCCCCCC
Q 007782 408 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTSQSEC 453 (590)
Q Consensus 408 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~~aEc 453 (590)
.+|++| ++..+ ..++++++.++.+ .+..+|..+.|--...|.
T Consensus 62 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~ 104 (294)
T 3g17_A 62 --TFDVII-IAVKT-HQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH 104 (294)
T ss_dssp --CEEEEE-ECSCG-GGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG
T ss_pred --CCCEEE-EeCCc-cCHHHHHHHHHHhhCCCCEEEEeccCcccHhh
Confidence 367766 44433 3578888888753 345688899998765543
No 499
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=45.21 E-value=18 Score=37.59 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=25.0
Q ss_pred ceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEcCC
Q 007782 331 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 374 (590)
Q Consensus 331 ~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD~~ 374 (590)
.+|+|+|||.||+..|..|.+. |. ++.++++.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~-----g~-------~v~v~E~~ 71 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA-----GF-------KTLLLEAR 71 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 5899999999999999888653 53 46666664
No 500
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=45.12 E-value=22 Score=37.62 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.3
Q ss_pred cceEEEeCcChHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEc
Q 007782 330 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 372 (590)
Q Consensus 330 d~riv~~GAGsAg~GIA~li~~~~~~~~G~s~eeA~~~i~lvD 372 (590)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 46899999999999999988761 15 4689999
Done!