BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007788
(589 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 162/298 (54%), Gaps = 18/298 (6%)
Query: 293 HLNSF-RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA 351
HL R +L E++ A+ FS N+LG+G F VYKG L DGTLVA++ + + E
Sbjct: 21 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGEL 80
Query: 352 EFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDW 411
+F + +++ H N++RLRGFC + E L+Y + G ++ L + S LDW
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDW 138
Query: 412 STRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 471
R I +G A+G+ YLH P I+HR++ +L+D++F ++ D GL KL+
Sbjct: 139 PKRQRIALGSARGLAYLHDH--CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 196
Query: 472 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG-------------SLVL 518
+G++APEY++TG+ +E++D+F +GV++L+++TG ++L
Sbjct: 197 XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 519 TSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + E +D +L+G + + E +L ++AL+CT P RP M V+ L
Sbjct: 257 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 18/298 (6%)
Query: 293 HLNSF-RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA 351
HL R +L E++ A+ F N+LG+G F VYKG L DG LVA++ + + E
Sbjct: 13 HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGEL 72
Query: 352 EFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDW 411
+F + +++ H N++RLRGFC + E L+Y + G ++ L + S LDW
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLDW 130
Query: 412 STRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 471
R I +G A+G+ YLH P I+HR++ +L+D++F ++ D GL KL+
Sbjct: 131 PKRQRIALGSARGLAYLHDH--CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 472 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS-------------LVL 518
+G++APEY++TG+ +E++D+F +GV++L+++TG ++L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 519 TSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + E +D +L+G + + E +L ++AL+CT P RP M V+ L
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 294 LNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEF 353
S+R+ L ++E AT F L+G G F VYKG LRDG VA++ S + E
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 354 VKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWST 413
+ + L+ RH +++ L GFC R E LIY + G L ++L + + + W
Sbjct: 84 TE-IETLSFCRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQ 140
Query: 414 RVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADD 470
R+ I IG A+G+ YLH+ AI+HR++ +L+D+ F P I D G+ K L
Sbjct: 141 RLEICIGAARGLHYLHTR-----AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
Query: 471 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSM-------- 522
+ V+K +GY+ PEY GR TE+SD+++FGV++ ++L + S+
Sbjct: 196 HLXXVVK--GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 523 RLAAES---ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
A ES E +D NL K K G A+ C E+RP+M V+ +L A
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 145/296 (48%), Gaps = 20/296 (6%)
Query: 296 SFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVK 355
S+R+ L ++E AT F L+G G F VYKG LRDG VA++ S + E +
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV 415
L+ RH +++ L GFC R E LIY + G L ++L + + + W R+
Sbjct: 86 IE-TLSFCRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
I IG A+G+ YLH+ AI+HR++ +L+D+ F P I D G+ K + D
Sbjct: 143 EICIGAARGLHYLHTR-----AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSM--------RLAA 526
+GY+ PEY GR TE+SD+++FGV++ ++L + S+ A
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 527 ES---ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
ES E +D NL K K G A+ C E+RP+M V+ +L A
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 149/301 (49%), Gaps = 36/301 (11%)
Query: 303 EVESATQCFSEV------NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE--AEFV 354
E+++ T F E N +G+G F VYKG + + T+ + + +EE +F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
+ + ++ +HEN++ L GF S G C L+Y + P G L L +G+ L W R
Sbjct: 79 QEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LSWHMR 135
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDI 471
I G A GI +LH + +HR++ +L+D+ F I+D GL + A +
Sbjct: 136 CKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 472 VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG----------SLVLTSS 521
+ S + + A Y+APE + G T +SDI++FGV++L+I+TG L+L
Sbjct: 191 MXSRIVGTTA--YMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 522 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV---IEELTV 578
+ E T E++ID+ + S S A + +A C HE RP ++ V ++E+T
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
Query: 579 A 579
+
Sbjct: 307 S 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 148/300 (49%), Gaps = 34/300 (11%)
Query: 303 EVESATQCFSEV------NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE--AEFV 354
E+++ T F E N +G+G F VYKG + + T+ + + +EE +F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 78
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
+ + ++ +HEN++ L GF S G C L+Y + P G L L +G+ L W R
Sbjct: 79 QEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LSWHMR 135
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
I G A GI +LH + +HR++ +L+D+ F I+D GL + ++ +
Sbjct: 136 CKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARA-SEKFAQT 189
Query: 475 VL--KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG----------SLVLTSSM 522
V+ + Y+APE + G T +SDI++FGV++L+I+TG L+L
Sbjct: 190 VMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 523 RLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV---IEELTVA 579
+ E T E++ID+ + S S A + +A C HE RP ++ V ++E+T +
Sbjct: 249 EIEDEEKTIEDYIDKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 38/302 (12%)
Query: 303 EVESATQCFSEV------NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE--AEFV 354
E+++ T F E N +G+G F VYKG + + T+ + + +EE +F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 72
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
+ + ++ +HEN++ L GF S G C L+Y + P G L L +G+ L W R
Sbjct: 73 QEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LSWHMR 129
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL----HKLLADD 470
I G A GI +LH + +HR++ +L+D+ F I+D GL K
Sbjct: 130 CKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 471 IVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG----------SLVLTS 520
+ ++ T+A Y+APE + G T +SDI++FGV++L+I+TG L+L
Sbjct: 185 MXXRIVGTTA---YMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 521 SMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV---IEELT 577
+ E T E++ID+ + S S A + +A C HE RP ++ V ++E+T
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTSVEA-MYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
Query: 578 VA 579
+
Sbjct: 300 AS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 137/291 (47%), Gaps = 33/291 (11%)
Query: 303 EVESATQCFSEV------NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE--AEFV 354
E+++ T F E N G+G F VYKG + + T+ + + +EE +F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD 69
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
+ + + +HEN++ L GF S G C L+Y + P G L L +G+ L W R
Sbjct: 70 QEIKVXAKCQHENLVELLGFS-SDGDDLC-LVYVYXPNGSLLDRLSCLDGTP-PLSWHXR 126
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
I G A GI +LH + +HR++ +L+D+ F I+D GL + A +
Sbjct: 127 CKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQ 179
Query: 475 VLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTG----------SLVLTSS 521
+ S +G Y APE + G T +SDI++FGV++L+I+TG L+L
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 238
Query: 522 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
+ E T E++ID+ S S A +A C HE RP ++ V
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDADSTSVEAXYS-VASQCLHEKKNKRPDIKKV 288
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 134
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HRNL+ +L++ + I D GL K+L D + +K + + + APE
Sbjct: 135 RY-----IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 43/310 (13%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSIN 342
+ G+ F + L + N E+E Q +GKG F V+KG L +D ++VAI+S+
Sbjct: 3 MGGSEFPKSRLPTLADN--EIEYEKQ-------IGKGGFGLVHKGRLVKDKSVVAIKSLI 53
Query: 343 VTSCKSEEA------EFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL- 395
+ + E EF + ++++++L H NI++L G + R ++ +F P G L
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLY 109
Query: 396 SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQ 453
+ LD+ ++ + WS ++ +++ IA GI Y+ + P IVHR+L + + +
Sbjct: 110 HRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDE 162
Query: 454 FNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVII 508
P+ +AD GL + V SV ++APE + +TE++D ++F +I+
Sbjct: 163 NAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 509 LQILTGSLVLTSSMRLAAESATFENFI-DRNLKGKFSESEAAKLGKMALVCTHEDPENRP 567
ILTG + F N I + L+ E +L + +C DP+ RP
Sbjct: 219 YTILTGEGPFDE---YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
Query: 568 TMEAVIEELT 577
+++EL+
Sbjct: 276 HFSYIVKELS 285
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 293 HLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTLV--AI 338
H++ LN E V++ F+EV +G+G+F VY GTL DG + A+
Sbjct: 24 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAV 81
Query: 339 RSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKY 398
+S+N + E ++F+ ++ H N++ L G C R G ++ + G L +
Sbjct: 82 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNF 140
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ E + V D + + +AKG+ YL S + VHR+L+ ++D++F +
Sbjct: 141 IRNETHNPTVKD---LIGFGLQVAKGMKYLASKK-----FVHRDLAARNCMLDEKFTVKV 192
Query: 459 ADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
AD GL + + D +SV + A + ++A E + T +FT +SD+++FGV++ ++
Sbjct: 193 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL---- 248
Query: 516 LVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAV 572
+T + TF+ + L+G+ E L ++ L C H E RP+ +
Sbjct: 249 --MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 305
Query: 573 IEELTVAAPVMATFL 587
+ ++ + +TF+
Sbjct: 306 VSRISA---IFSTFI 317
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D F +K + + + APE
Sbjct: 134 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 293 HLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTLV--AI 338
H++ LN E V++ F+EV +G+G+F VY GTL DG + A+
Sbjct: 25 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAV 82
Query: 339 RSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKY 398
+S+N + E ++F+ ++ H N++ L G C R G ++ + G L +
Sbjct: 83 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNF 141
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ E + V D + + +AKG+ YL S + VHR+L+ ++D++F +
Sbjct: 142 IRNETHNPTVKD---LIGFGLQVAKGMKYLASKK-----FVHRDLAARNCMLDEKFTVKV 193
Query: 459 ADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
AD GL + + D +SV + A + ++A E + T +FT +SD+++FGV++ ++
Sbjct: 194 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL---- 249
Query: 516 LVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAV 572
+T + TF+ + L+G+ E L ++ L C H E RP+ +
Sbjct: 250 --MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 306
Query: 573 IEELTVAAPVMATFL 587
+ ++ + +TF+
Sbjct: 307 VSRISA---IFSTFI 318
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 26 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 84 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 139
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 140 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 247
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 248 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 92 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 147
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 148 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 255
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 299
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 32 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 90 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 145
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 146 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 253
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 254 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 92 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 147
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 148 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 255
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 256 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 29 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 87 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 142
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 143 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 250
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 33 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 91 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 146
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D +SV + A +
Sbjct: 147 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 254
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 255 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 298
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 41/315 (13%)
Query: 293 HLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTLV--AI 338
H++ LN E V++ F+EV +G+G+F VY GTL DG + A+
Sbjct: 3 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAV 60
Query: 339 RSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKY 398
+S+N + E ++F+ ++ H N++ L G C R G ++ + G L +
Sbjct: 61 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNF 119
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ E + V D + + +AKG+ YL S + VHR+L+ ++D++F +
Sbjct: 120 IRNETHNPTVKD---LIGFGLQVAKGMKYLASKK-----FVHRDLAARNCMLDEKFTVKV 171
Query: 459 ADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
AD GL + + D +SV + A + ++A E + T +FT +SD+++FGV++ ++
Sbjct: 172 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL---- 227
Query: 516 LVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAV 572
+T + TF+ + L+G+ E L ++ L C H E RP+ +
Sbjct: 228 --MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284
Query: 573 IEELTVAAPVMATFL 587
+ ++ + +TF+
Sbjct: 285 VSRISA---IFSTFI 296
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI +F P G L +YL + + +D + I KG+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 136
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 137 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 37/307 (12%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSIN 342
+ G+ F + L + N E+E Q +GKG F V+KG L +D ++VAI+S+
Sbjct: 3 MGGSEFPKSRLPTLADN--EIEYEKQ-------IGKGGFGLVHKGRLVKDKSVVAIKSLI 53
Query: 343 VTSCKSEEA------EFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL- 395
+ + E EF + ++++++L H NI++L G + R ++ +F P G L
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLY 109
Query: 396 SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQ 453
+ LD+ ++ + WS ++ +++ IA GI Y+ + P IVHR+L + + +
Sbjct: 110 HRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDE 162
Query: 454 FNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQI 511
P+ A L + V SV ++APE + +TE++D ++F +I+ I
Sbjct: 163 NAPVCAKVADFSL-SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 512 LTGSLVLTSSMRLAAESATFENFI-DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTME 570
LTG + F N I + L+ E +L + +C DP+ RP
Sbjct: 222 LTGEGPFDE---YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFS 278
Query: 571 AVIEELT 577
+++EL+
Sbjct: 279 YIVKELS 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 137 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 43/310 (13%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSIN 342
+ G+ F + L + N E+E Q +GKG F V+KG L +D ++VAI+S+
Sbjct: 3 MGGSEFPKSRLPTLADN--EIEYEKQ-------IGKGGFGLVHKGRLVKDKSVVAIKSLI 53
Query: 343 VTSCKSEEA------EFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL- 395
+ + E EF + ++++++L H NI++L G + R ++ +F P G L
Sbjct: 54 LGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR----MVMEFVPCGDLY 109
Query: 396 SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQ 453
+ LD+ ++ + WS ++ +++ IA GI Y+ + P IVHR+L + + +
Sbjct: 110 HRLLDK----AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDE 162
Query: 454 FNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVII 508
P+ +AD G + V SV ++APE + +TE++D ++F +I+
Sbjct: 163 NAPVCAKVADFGT----SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 509 LQILTGSLVLTSSMRLAAESATFENFI-DRNLKGKFSESEAAKLGKMALVCTHEDPENRP 567
ILTG + F N I + L+ E +L + +C DP+ RP
Sbjct: 219 YTILTGEGPFDE---YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
Query: 568 TMEAVIEELT 577
+++EL+
Sbjct: 276 HFSYIVKELS 285
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 310 CFSEVNLLGKGNFSSVYKGTLRDGT-----LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
C + ++G G F VYKG L+ + VAI+++ + + +F+ ++
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NIIRL G +I ++ G L K+L +++G +VL V ++ GIA G
Sbjct: 105 HHNIIRLEGVISKYK--PMMIITEYMENGALDKFLREKDGEFSVLQ---LVGMLRGIAAG 159
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAM 482
+ YL + VHR+L+ +L++ ++D GL ++L DD ++ +
Sbjct: 160 MKYLANMNY-----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 483 GYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ APE ++ +FT SD+++FG+++ +++T
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 164
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 165 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 137
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 138 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 33 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 91 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 146
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
YL S + VHR+L+ ++D++F +AD GL + + D SV + A +
Sbjct: 147 YLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 254
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 255 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 298
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 139
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 140 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 132
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 133 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 138
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 139 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 151
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 152 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 136
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 137 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 140
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 141 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 151
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 152 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 134 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 131
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 132 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 16/204 (7%)
Query: 317 LGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LGKGNF SV L+D G +VA++ + S + +F + + +L SL+H+NI++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C S GR LI ++ P G L YL + + +D + I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK 133
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+HR+L+ +L++ + I D GL K+L D +K + + + APE
Sbjct: 134 RY-----IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+T +F+ SD+++FGV++ ++ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L+ +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 73 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 122
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 238
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 239 QCWRKDPEERPTFE 252
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVCEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 75 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 124
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 240
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 241 QCWRKDPEERPTFE 254
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 20/259 (7%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
+ LG G F V+ GT T VAI+++ + E F++ ++ L+H+ +++L
Sbjct: 14 IKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES--FLEEAQIMKKLKHDKLVQLYA 71
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+++ ++ KG L +L EG + L V + +A G+ Y +
Sbjct: 72 VVSEE---PIYIVTEYMNKGSLLDFLKDGEGRA--LKLPNLVDMAAQVAAGMAY-----I 121
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+ +HR+L +L+ IAD GL +L+ D+ + + + APE G
Sbjct: 122 ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSM--RLAAESATFENFIDRNLKGKFSESEAAKL 551
RFT +SD+++FG+++ +++T V M R E ++R + + L
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ------VERGYRMPCPQDCPISL 235
Query: 552 GKMALVCTHEDPENRPTME 570
++ + C +DPE RPT E
Sbjct: 236 HELMIHCWKKDPEERPTFE 254
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 251 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 300
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 416
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 417 QCWRKDPEERPTFE 430
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVMEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ +RHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 41/315 (13%)
Query: 293 HLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTLV--AI 338
H++ LN E V++ F+EV +G+G+F VY GTL DG + A+
Sbjct: 6 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 339 RSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKY 398
+S+N + E ++F+ ++ H N++ L G C R G ++ + G L +
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHGDLRNF 122
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ E + V D + + +AKG+ +L S + VHR+L+ ++D++F +
Sbjct: 123 IRNETHNPTVKD---LIGFGLQVAKGMKFLASKK-----FVHRDLAARNCMLDEKFTVKV 174
Query: 459 ADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
AD GL + + D SV + A + ++A E + T +FT +SD+++FGV++ ++
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL---- 230
Query: 516 LVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAV 572
+T + TF+ + L+G+ E L ++ L C H E RP+ +
Sbjct: 231 --MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287
Query: 573 IEELTVAAPVMATFL 587
+ ++ + +TF+
Sbjct: 288 VSRISA---IFSTFI 299
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 41/320 (12%)
Query: 288 GFSREHLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTL 335
G + H++ LN E V++ F+EV +G+G+F VY GTL DG
Sbjct: 60 GANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKK 117
Query: 336 V--AIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 393
+ A++S+N + E ++F+ ++ H N++ L G C R G ++ + G
Sbjct: 118 IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHG 176
Query: 394 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 453
L ++ E + V D + + +AKG+ +L S + VHR+L+ ++D++
Sbjct: 177 DLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASKK-----FVHRDLAARNCMLDEK 228
Query: 454 FNPLIADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQ 510
F +AD GL + + D SV + A + ++A E + T +FT +SD+++FGV++ +
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
Query: 511 ILTGSLVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRP 567
+ +T + TF+ + L+G+ E L ++ L C H E RP
Sbjct: 289 L------MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 341
Query: 568 TMEAVIEELTVAAPVMATFL 587
+ ++ ++ + +TF+
Sbjct: 342 SFSELVSRISA---IFSTFI 358
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 84 EE---PIYIVTEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAY-----VERM 133
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 557 VCTHEDPENRPTME 570
C +DPE RPT E
Sbjct: 250 QCWRKDPEERPTFE 263
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 41/320 (12%)
Query: 288 GFSREHLNSFRLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTL--RDGTL 335
G + H++ LN E V++ F+EV +G+G+F VY GTL DG
Sbjct: 1 GANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKK 58
Query: 336 V--AIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKG 393
+ A++S+N + E ++F+ ++ H N++ L G C R G ++ + G
Sbjct: 59 IHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-RSEGSPLVVLPYMKHG 117
Query: 394 KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 453
L ++ E + V D + + +AKG+ +L S + VHR+L+ ++D++
Sbjct: 118 DLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASKK-----FVHRDLAARNCMLDEK 169
Query: 454 FNPLIADCGLHKLLADDIVFSVLKTSAA---MGYLAPEYVTTGRFTERSDIFAFGVIILQ 510
F +AD GL + + D SV + A + ++A E + T +FT +SD+++FGV++ +
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 511 ILTGSLVLTSSMRLAAESATFENFIDRNLKGKF---SESEAAKLGKMALVCTHEDPENRP 567
+ +T + TF+ + L+G+ E L ++ L C H E RP
Sbjct: 230 L------MTRGAPPYPDVNTFDITV-YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 282
Query: 568 TMEAVIEELTVAAPVMATFL 587
+ ++ ++ + +TF+
Sbjct: 283 SFSELVSRISA---IFSTFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 32 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 90 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 145
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
+L S + VHR+L+ ++D++F +AD GL + + D SV + A +
Sbjct: 146 FLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 253
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 254 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 15/201 (7%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA-EFVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +V++ G+ VA++ + +E EF++ + ++ LRH NI+ G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
++ ++ +G L + L + G+ LD R+S+ +AKG+ YLH+
Sbjct: 104 TQPP--NLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHN---RN 157
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
P IVHRNL +L+D+++ + D GL +L A + L + +A G ++APE +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS----TFLSSKSAAGTPEWMAPEVLRD 213
Query: 493 GRFTERSDIFAFGVIILQILT 513
E+SD+++FGVI+ ++ T
Sbjct: 214 EPSNEKSDVYSFGVILWELAT 234
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 39 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 97 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 152
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
+L S + VHR+L+ ++D++F +AD GL + + D SV + A +
Sbjct: 153 FLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 260
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 261 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 304
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 35 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 93 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 148
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
+L S + VHR+L+ ++D++F +AD GL + + D SV + A +
Sbjct: 149 FLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 256
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 257 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 300
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 333 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 382
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 498
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 499 QCWRKEPEERPTFE 512
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 31/287 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL--RDGTLV--AIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+EV +G+G+F VY GTL DG + A++S+N + E ++F+ ++ H
Sbjct: 35 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ L G C R G ++ + G L ++ E + V D + + +AKG+
Sbjct: 93 NVLSLLGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMK 148
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MG 483
+L S + VHR+L+ ++D++F +AD GL + + D SV + A +
Sbjct: 149 FLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + T +FT +SD+++FGV++ ++ +T + TF+ + L+G+
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWEL------MTRGAPPYPDVNTFDITV-YLLQGRR 256
Query: 544 ---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMATFL 587
E L ++ L C H E RP+ ++ ++ + +TF+
Sbjct: 257 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA---IFSTFI 300
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 77 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 126
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 242
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 243 QCWRKEPEERPTFE 256
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 250 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 299
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 416 QCWRKEPEERPTFE 429
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 250 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 299
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 416 QCWRKEPEERPTFE 429
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V+ T T VA++++ S E F+ ++ +L+H+ +++L
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 80
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ ++I +F KG L +L +EGS L + IA+G+ ++
Sbjct: 81 ---KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 132
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L +L+ IAD GL +++ D+ + + + APE + G FT
Sbjct: 133 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++++I+T + M + ++R + E+ +L + +
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGM----SNPEVIRALERGYRMPRPENCPEELYNIMM 246
Query: 557 VCTHEDPENRPTMEAV 572
C PE RPT E +
Sbjct: 247 RCWKNRPEERPTFEYI 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 250 EE---PIYIVGEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 299
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 415
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 416 QCWRKEPEERPTFE 429
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 81 EE---PIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAY-----VERM 130
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 247 QCWRKEPEERPTFE 260
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 81 EE---PIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAY-----VERM 130
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 247 QCWRKEPEERPTFE 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 317 LGKGNFSSV----YKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LG+G+F V Y + G VA++S+ S + A+ K + +L +L HENI++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C G LI +F P G L +YL + + N ++ ++ + I KG+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+ VHR+L+ VL++ + I D GL K + D +K + + + APE
Sbjct: 146 QY-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 490 VTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
+ +F SD+++FGV + ++LT +S M L
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 317 LGKGNFSSV----YKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LG+G+F V Y + G VA++S+ S + A+ K + +L +L HENI++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+G C G LI +F P G L +YL + + N ++ ++ + I KG+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPEY 489
+ VHR+L+ VL++ + I D GL K + D +K + + + APE
Sbjct: 134 QY-----VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 490 VTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
+ +F SD+++FGV + ++LT +S M L
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 223
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 16/256 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V+ T T VA++++ S E F+ ++ +L+H+ +++L
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 253
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ ++I +F KG L +L +EGS L + IA+G+ ++
Sbjct: 254 ---KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 305
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L +L+ IAD GL +++ D+ + + + APE + G FT
Sbjct: 306 --IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++++I+T + M + ++R + E+ +L + +
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGM----SNPEVIRALERGYRMPRPENCPEELYNIMM 419
Query: 557 VCTHEDPENRPTMEAV 572
C PE RPT E +
Sbjct: 420 RCWKNRPEERPTFEYI 435
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G F V+ GT T VAI+++ + E F++ ++ LRHE +++L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
++ ++ KG L +L E G L V + IA G+ Y V +
Sbjct: 74 EE---PIXIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAY-----VERM 123
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L +L+ + +AD GL +L+ D+ + + + APE GRFT
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++ ++ T V M + + ++R + L +
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMV----NREVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 557 VCTHEDPENRPTME 570
C ++PE RPT E
Sbjct: 240 QCWRKEPEERPTFE 253
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 285
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 286 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 334
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HRNL+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 335 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 449
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 450 ELMRACWQWNPSDRPSFAEI 469
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 19/280 (6%)
Query: 303 EVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS 362
E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 60
Query: 363 LRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
L+H+ ++RL ++I ++ G L +L G ++ + + IA
Sbjct: 61 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIA 115
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+G+ ++ +HRNL +L+ + IAD GL +L+ D+ + +
Sbjct: 116 EGMAFIEERNY-----IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 483 GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542
+ APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRMV 226
Query: 543 FSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 227 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA-EFVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +V++ G+ VA++ + +E EF++ + ++ LRH NI+ G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
++ ++ +G L + L + G+ LD R+S+ +AKG+ YLH+
Sbjct: 104 TQPP--NLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHN---RN 157
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG-YLAPEYVTTGR 494
P IVHR+L +L+D+++ + D GL +L A + S K +A ++APE +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVLRDEP 215
Query: 495 FTERSDIFAFGVIILQILT 513
E+SD+++FGVI+ ++ T
Sbjct: 216 SNEKSDVYSFGVILWELAT 234
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 71
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 72 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 126
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 127 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 237
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 238 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 278
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 69
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 70 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 124
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 125 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 235
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 236 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 72
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 73 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 127
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 128 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 238
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 239 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 279
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 73
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 74 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 128
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 129 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 184 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 239
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 240 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 280
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 65
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 66 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 120
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 121 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 231
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 232 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 63
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 118
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 119 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 229
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 69
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 70 QLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 124
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 125 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 235
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 236 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 324
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 325 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 373
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HRNL+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 374 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 432
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 488
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 489 ELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 282
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 283 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 331
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HRNL+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 332 -EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 390
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 446
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 447 ELMRACWQWNPSDRPSFAEI 466
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 64
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 65 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 119
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 120 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 230
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 231 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 68
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 69 QLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 123
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 124 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 234
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 235 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 63
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 118
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 119 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 229
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 26/282 (9%)
Query: 314 VNLLGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
++ LGKGNF SV L D G LVA++ + S ++ +F + + +L +L + I
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFI 73
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++ RG GR L+ ++ P G L +L + LD S + I KG+ YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 130
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLA 486
S VHR+L+ +L++ + + IAD GL KLL D + V++ + + + A
Sbjct: 131 GSRRC-----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 185
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS----------LVLTSSMRLAAESATFENFID 536
PE ++ F+ +SD+++FGV++ ++ T L + S R + ++
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLE 245
Query: 537 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578
+ + A++ ++ +C P++RP+ A+ +L +
Sbjct: 246 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 287
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 63
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 64 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 118
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 119 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 229
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 19/281 (6%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+E E + V LG G F V+ G T VA++S+ S + F+ L+
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMK 58
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
L+H+ ++RL ++I ++ G L +L G ++ + + I
Sbjct: 59 QLQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQI 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
A+G+ ++ +HR+L +L+ + IAD GL +L+ D+ +
Sbjct: 114 AEGMAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRM 224
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 225 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLV----AIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
V +LG G F +VYKG + +G V AI+ +N T+ EF+ ++ S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
+++RL G C S L+ P G L +Y+ + + GS +L+W + IA
Sbjct: 100 PHLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIA 150
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL +LL D+ ++
Sbjct: 151 KGMMYLEERR-----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 205
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +FT +SD++++GV I +++T
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
++ LGKGNF SV L D G LVA++ + S ++ +F + + +L +L + I
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFI 70
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++ RG GR E L+ ++ P G L +L + LD S + I KG+ YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 127
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLA 486
S VHR+L+ +L++ + + IAD GL KLL D V++ + + + A
Sbjct: 128 GSRRC-----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILT 513
PE ++ F+ +SD+++FGV++ ++ T
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 79 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLV----AIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
V +LG G F +VYKG + +G V AI+ +N T+ EF+ ++ S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
+++RL G C S L+ P G L +Y+ + + GS +L+W + IA
Sbjct: 77 PHLVRLLGVCLS---PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL +LL D+ ++
Sbjct: 128 KGMMYLEERR-----LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +FT +SD++++GV I +++T
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 84 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 132
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 247
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 248 ELMRACWQWNPSDRPS 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 79 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
++ LGKGNF SV L D G LVA++ + S ++ +F + + +L +L + I
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFI 86
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++ RG GR L+ ++ P G L +L + LD S + I KG+ YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 143
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLA 486
S VHR+L+ +L++ + + IAD GL KLL D + V++ + + + A
Sbjct: 144 GSRRC-----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILT 513
PE ++ F+ +SD+++FGV++ ++ T
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 125/256 (48%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G F VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 77 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 125
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + S + + ++++ + + E K+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGM----SPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 241 ELMRACWQWNPSDRPS 256
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSV---YKGTLRD--GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
++ LGKGNF SV L D G LVA++ + S ++ +F + + +L +L + I
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQREIQILKALHSDFI 74
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++ RG GR L+ ++ P G L +L + LD S + I KG+ YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL 131
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLA 486
S VHR+L+ +L++ + + IAD GL KLL D + V++ + + + A
Sbjct: 132 GSRRC-----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILT 513
PE ++ F+ +SD+++FGV++ ++ T
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 81 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 129
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 188
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 244
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 245 ELMRACWQWNPSDRPS 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 80 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 128
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 129 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 187
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 243
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 244 ELMRACWQWNPSDRPS 259
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 84 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 132
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 247
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 82
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 83 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 132 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 246
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 247 ELMRACWQWNPSDRPS 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 84 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 132
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 247
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 91
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 92 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 140
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 141 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 199
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 255
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 256 ELMRACWQWNPSDRPSFAEI 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 80 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 128
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 129 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 243
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 244 ELMRACWQWNPSDRPS 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 126/260 (48%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 77 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 125
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + S + + ++++ + + E K+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGM----SPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 84 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 132
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 247
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 248 ELMRACWQWNPSDRPS 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 317 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+GNF V+ G LR D TLVA++S T +A+F++ +L H NI+RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ +++ + G +L E V T + ++ A G+ YL S
Sbjct: 182 TQ--KQPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESK---- 232
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI-VFSVLKTSAAMGYLAPEYVTTGR 494
+HR+L+ L+ ++ I+D G+ + AD + S + + APE + GR
Sbjct: 233 -CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKM 554
++ SD+++FG+++ + + L +S + F+++ + E + ++
Sbjct: 292 YSSESDVWSFGILLWETFS----LGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRL 347
Query: 555 ALVCTHEDPENRPTMEAVIEEL 576
C +P RP+ + +EL
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQEL 369
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 16/262 (6%)
Query: 317 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+GNF V+ G LR D TLVA++S T +A+F++ +L H NI+RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ +++ + G +L E V T + ++ A G+ YL S
Sbjct: 182 TQ--KQPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESK---- 232
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI-VFSVLKTSAAMGYLAPEYVTTGR 494
+HR+L+ L+ ++ I+D G+ + AD + S + + APE + GR
Sbjct: 233 -CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKM 554
++ SD+++FG+++ + + L +S + F+++ + E + ++
Sbjct: 292 YSSESDVWSFGILLWETFS----LGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRL 347
Query: 555 ALVCTHEDPENRPTMEAVIEEL 576
C +P RP+ + +EL
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQEL 369
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 81 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 129
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 244
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 245 ELMRACWQWNPSDRPS 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 81 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 129
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 130 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 244
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 245 ELMRACWQWNPSDRPS 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 128 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 242
Query: 553 KMALVCTHEDPENRPTMEAV 572
++ C +P +RP+ +
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E ++ VL + + I+ + YL
Sbjct: 84 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYL---- 132
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 133 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + + L S +E ++++ + + E K+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYE-LLEKDYRMERPEGCPEKVY 247
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 248 ELMRACWQWNPSDRPS 263
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 125/256 (48%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY+G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
++I +F G L YL +++E S+ VL + + I+ + YL
Sbjct: 77 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYL---- 125
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 126 -EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAY 184
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
+F+ +SD++AFGV++ +I T + S + + ++++ + + E K+
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGM----SPYPGIDPSQVYELLEKDYRMERPEGCPEKVY 240
Query: 553 KMALVCTHEDPENRPT 568
++ C +P +RP+
Sbjct: 241 ELMRACWQWNPSDRPS 256
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V LG G F V+ G + T VA++++ + + F++ L+ +L+H+ ++RL
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA--FLEEANLMKTLQHDKLVRL-- 72
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ ++I +F KG L +L +EG +L + IA+G+ Y +
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAY-----I 125
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+ +HR+L VL+ + IAD GL +++ D+ + + + APE + G
Sbjct: 126 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 494 RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
FT +S++++FG+++ +I+T G + SA + + R + + E +
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY--RMPRMENCPDELYDIM 243
Query: 553 KMALVCTHEDPENRPT---MEAVIEELTVA 579
KM C E E RPT +++V+++ A
Sbjct: 244 KM---CWKEKAEERPTFDYLQSVLDDFYTA 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 135/305 (44%), Gaps = 49/305 (16%)
Query: 286 GTGFSREHLNSFRLNLEEV----ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSI 341
G F+RE + + R+++E++ +S C+ + + G+ + VAI+++
Sbjct: 39 GRSFTRE-IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP------------VAIKAL 85
Query: 342 NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ 401
+ + +F+ ++ H NIIRL G +RGR ++ ++ G L +L
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEG-VVTRGR-LAMIVTEYMENGSLDTFLRT 143
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461
+G ++ V ++ G+ G+ YL + VHR+L+ VL+D ++D
Sbjct: 144 HDGQFTIMQL---VGMLRGVGAGMRYL-----SDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 462 GLHKLLAD--DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLT 519
GL ++L D D ++ + + APE + F+ SD+++FGV++ ++
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV-------- 247
Query: 520 SSMRLAAESATFENFIDRNLKGKFSESE--AAKLG------KMALVCTHEDPENRPTMEA 571
LA + N +R++ E A +G ++ L C H+D RP
Sbjct: 248 ----LAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303
Query: 572 VIEEL 576
++ L
Sbjct: 304 IVSVL 308
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V LG G F V+ G + T VA++++ + + F++ L+ +L+H+ ++RL
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA--FLEEANLMKTLQHDKLVRL-- 73
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ ++I ++ KG L +L +EG +L + IA+G+ Y +
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAY-----I 126
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+ +HR+L VL+ + IAD GL +++ D+ + + + APE + G
Sbjct: 127 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 494 RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
FT +SD+++FG+++ +I+T G + +A + + R + + E +
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGY--RMPRVENCPDELYDIM 244
Query: 553 KMALVCTHEDPENRPT---MEAVIEELTVA 579
KM C E E RPT +++V+++ A
Sbjct: 245 KM---CWKEKAEERPTFDYLQSVLDDFYTA 271
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 30/288 (10%)
Query: 301 LEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK--SEEAEFVKG-L 357
L E++ A E+ +G G F VY+ G VA+++ + S+ E V+
Sbjct: 1 LLEIDFAELTLEEI--IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEA 57
Query: 358 YLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSI 417
L L+H NII LRG C L+ +FA G L++ L + ++L V+
Sbjct: 58 KLFAMLKHPNIIALRGVCLKEP--NLCLVMEFARGGPLNRVLSGKRIPPDIL-----VNW 110
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF------NPL--IADCGLHKLLAD 469
+ IA+G+ YLH + I+HR+L +LI Q+ N + I D GL +
Sbjct: 111 AVQIARGMNYLHDEAIV--PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
S + A ++APE + F++ SD++++GV++ ++LTG + LA
Sbjct: 169 TTKMS---AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG 225
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577
N + + E K+ C + DP +RP+ ++++LT
Sbjct: 226 VAMNKLALPIPSTCPEP----FAKLMEDCWNPDPHSRPSFTNILDQLT 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 49/305 (16%)
Query: 286 GTGFSREHLNSFRLNLEEV----ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSI 341
G F+RE + + R+++E++ +S C+ + + G+ + VAI+++
Sbjct: 39 GRSFTRE-IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP------------VAIKAL 85
Query: 342 NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ 401
+ + +F+ ++ H NIIRL G +RGR ++ ++ G L +L
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEG-VVTRGR-LAMIVTEYMENGSLDTFLRT 143
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461
+G ++ V ++ G+ G+ YL + VHR+L+ VL+D ++D
Sbjct: 144 HDGQFTIMQL---VGMLRGVGAGMRYL-----SDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 462 GLHKLLADDIVFSVLKTSAAMG--YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLT 519
GL ++L DD + T + + APE + F+ SD+++FGV++ ++
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV-------- 247
Query: 520 SSMRLAAESATFENFIDRNLKGKFSESE--AAKLG------KMALVCTHEDPENRPTMEA 571
LA + N +R++ E A +G ++ L C H+D RP
Sbjct: 248 ----LAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303
Query: 572 VIEEL 576
++ L
Sbjct: 304 IVSVL 308
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 127/273 (46%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I + E+ F++ ++ L H +++L G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYG 69
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+++F G LS YL + G + T + + + + +G+ YL +
Sbjct: 70 VCLEQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 122
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 123 ---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 180 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 233 VYQIMNH---CWKERPEDRPAFSRLLRQLAAIA 262
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V+ T T VA++++ S E F+ ++ +L+H+ +++L
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 247
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ ++I +F KG L +L +EGS L + IA+G+ ++
Sbjct: 248 ---KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY--- 299
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L +L+ IAD GL ++ A + + APE + G FT
Sbjct: 300 --IHRDLRAANILVSASLVCKIADFGLARVGA----------KFPIKWTAPEAINFGSFT 347
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SD+++FG+++++I+T + M + ++R + E+ +L + +
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGM----SNPEVIRALERGYRMPRPENCPEELYNIMM 403
Query: 557 VCTHEDPENRPTMEAV 572
C PE RPT E +
Sbjct: 404 RCWKNRPEERPTFEYI 419
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 22/256 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G + VY G + +L VA++++ + + EE F+K ++ ++H N+++L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 97
Query: 376 CSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
+++ ++ P G L YL ++EE ++ VL + + I+ + YL
Sbjct: 98 TLEP--PFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYL---- 146
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
K +HR+L+ L+ + +AD GL +L+ D + + + APE +
Sbjct: 147 -EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLG 552
F+ +SD++AFGV++ +I T + + L + + +++ + + E K+
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----SQVYDLLEKGYRMEQPEGCPPKVY 261
Query: 553 KMALVCTHEDPENRPT 568
++ C P +RP+
Sbjct: 262 ELMRACWKWSPADRPS 277
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I S E +F++ ++ L H +++L G
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS--EDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+++F G LS YL + G + T + + + + +G+ YL +
Sbjct: 90 VCLEQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 142
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 143 ---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 200 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 252
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 253 VYQIMNH---CWKERPEDRPAFSRLLRQLAEIA 282
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I + E+ F++ ++ L H +++L G
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYG 72
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+++F G LS YL + G + T + + + + +G+ YL +
Sbjct: 73 VCLEQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 125
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 126 ---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 183 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 235
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 236 VYQIMNH---CWRERPEDRPAFSRLLRQLAEIA 265
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I + E+ F++ ++ L H +++L G
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYG 67
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+++F G LS YL + G + T + + + + +G+ YL +
Sbjct: 68 VCLEQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 120
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 121 ---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 178 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 230
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 231 VYQIMNH---CWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I + E+ F++ ++ L H +++L G
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYG 69
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+++F G LS YL + G + T + + + + +G+ YL +
Sbjct: 70 VCLEQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 122
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 123 ---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 180 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 232
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 233 VYQIMNH---CWKERPEDRPAFSRLLRQLAEIA 262
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 22/275 (8%)
Query: 310 CFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
C ++G G F V G L+ VAI+++ + + +F+ ++ H
Sbjct: 34 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 93
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
N+I L G +I +F G L +L Q +G V+ V ++ GIA G+
Sbjct: 94 PNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVI---QLVGMLRGIAAGM 148
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI----VFSVLKTSAA 481
YL +++N VHR+L+ +L++ ++D GL + L DD S L
Sbjct: 149 KYL--ADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + +FT SD++++G+++ ++++ M + N I+++ +
Sbjct: 204 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM----TNQDVINAIEQDYRL 259
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ L ++ L C +D +RP ++ L
Sbjct: 260 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 19/278 (6%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
E + V LG G V+ G T VA++S+ S + F+ L+ L+
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQ 66
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H+ ++RL ++I ++ G L +L G ++ + + IA+G
Sbjct: 67 HQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEG 121
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ ++ +HR+L +L+ + IAD GL +L+ D + + +
Sbjct: 122 MAFIEERNY-----IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
APE + G FT +SD+++FG+++ +I+T + M +N ++R +
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM---TNPEVIQN-LERGYRMVRP 232
Query: 545 ESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTVA 579
++ +L ++ +C E PE+RPT + +V+E+ A
Sbjct: 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 315 NLLGKGNFSSVYKGTLRDGTL----VAIRSIN-VTSCKSEEAEFVKGLYLLTSLRHENII 369
++GKG+F VY G D AI+S++ +T + EA +GL L+ L H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGL-LMRGLNHPNVL 85
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L G G ++ + G L +++ + + V D +S + +A+G+ YL
Sbjct: 86 ALIGIMLP-PEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYLA 141
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA---MGYLA 486
+ VHR+L+ ++D+ F +AD GL + + D +SV + A + + A
Sbjct: 142 EQK-----FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
E + T RFT +SD+++FGV++ ++LT + + +F+ + + E
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----DPFDLTHFLAQGRRLPQPEY 252
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
L ++ C DP RPT ++ E+
Sbjct: 253 CPDSLYQVMQQCWEADPAVRPTFRVLVGEV 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 99 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 153
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 154 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 262
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 109 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 163
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 164 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 272
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 118/267 (44%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ ++ G L +L + + V+ V ++ GIA G+ YL
Sbjct: 82 LEGVVTKSK--PVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 137 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 245
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
E C ++G G F V G L+ VAI+++ V + + +F+ ++
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 361 TSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG 420
H N++ L G +RG+ ++ +F G L +L + +G V+ V ++ G
Sbjct: 99 GQFDHPNVVHLEG-VVTRGK-PVMIVIEFMENGALDAFLRKHDGQFTVI---QLVGMLRG 153
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKT 478
IA G+ YL VHR+L+ +L++ ++D GL +++ DD V++
Sbjct: 154 IAAGMRYLADM-----GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +FT SD++++G+++ ++++
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 78 PHVCRLLGICLT---STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 129 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLF 101
+ L + N L+G IP +IGS+ L +L L HN ++G IPD +G+L L LDLS N L
Sbjct: 631 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 690
Query: 102 GTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNGGFQ------FQNNPGLCG 149
G IP++++ L +D+ NN LSG +P G F+ F NNPGLCG
Sbjct: 691 GRIPQAMSALTMLTEIDLSNNNLSGPIPEM-----GQFETFPPAKFLNNPGLCG 739
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLF 101
V L L N L+G IP+ +GSL L L L N L G IP L + L+ L L FN L
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 476
Query: 102 GTIPESLANNAELLFLDVQNNTLSGIVPSALKRL 135
G IP L+N L ++ + NN L+G +P + RL
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 50 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109
N LTG IP+ + + +L+ ++L +NRL G IP +G L L L LS NS G IP L
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 532
Query: 110 NNAELLFLDVQNNTLSGIVPSALKRLNG 137
+ L++LD+ N +G +P+A+ + +G
Sbjct: 533 DCRSLIWLDLNTNLFNGTIPAAMFKQSG 560
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L+L N L G IP ++ +K+L L L N L G IP L N L + LS N L G I
Sbjct: 444 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 503
Query: 105 PESLANNAELLFLDVQNNTLSGIVPSAL 132
P+ + L L + NN+ SG +P+ L
Sbjct: 504 PKWIGRLENLAILKLSNNSFSGNIPAEL 531
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L L N TG IP + + L L L N L+G IP SLG+L KL+ L L N L G I
Sbjct: 396 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 455
Query: 105 PESL--ANNAELLFLDVQNNTLSGIVPSAL 132
P+ L E L LD N L+G +PS L
Sbjct: 456 PQELMYVKTLETLILDF--NDLTGEIPSGL 483
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
+ L N+LTG IP IG L++L++L L +N +G IP LG+ L LDL+ N GTI
Sbjct: 492 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 551
Query: 105 PESL 108
P ++
Sbjct: 552 PAAM 555
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIP-DSLGNLGKLKRLDLSFNSLFGT 103
L L N G +P GS L L L N +G +P D+L + LK LDLSFN G
Sbjct: 296 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 355
Query: 104 IPESLAN-NAELLFLDVQNNTLSG-IVPSALKRLNGGFQ---FQNNPGLCGDGIASLRAC 158
+PESL N +A LL LD+ +N SG I+P+ + Q QNN G G +L C
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN-GFTGKIPPTLSNC 414
Query: 159 T 159
+
Sbjct: 415 S 415
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 1 MEGFYFLDECGIHGKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQI 60
M G LD + F EFS ++ + + ++ L L N +G I +
Sbjct: 339 MRGLKVLD--------LSFNEFSGELPESLTNLSASLL-----TLDLSSNNFSGPILPNL 385
Query: 61 --GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118
+L L LQ+N G IP +L N +L L LSFN L GTIP SL + ++L L
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 119 VQNNTLSGIVPSAL 132
+ N L G +P L
Sbjct: 446 LWLNMLEGEIPQEL 459
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 44 VLQLCCNQLTGNIPAQIGSLK-SLSVLTLQHNRLNGGIPDSLGNLGK--LKRLDLSFNSL 100
VL L N+ +G +P + +L SL L L N +G I +L K L+ L L N
Sbjct: 344 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 403
Query: 101 FGTIPESLANNAELLFLDVQNNTLSGIVPSALKRL 135
G IP +L+N +EL+ L + N LSG +PS+L L
Sbjct: 404 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 46/140 (32%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSL----------------- 84
+L+L N +GNIPA++G +SL L L N NG IP ++
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 572
Query: 85 ---------------GNL--------GKLKRL------DLSFNSLFGTIPESLANNAELL 115
GNL +L RL +++ G + NN ++
Sbjct: 573 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 632
Query: 116 FLDVQNNTLSGIVPSALKRL 135
FLD+ N LSG +P + +
Sbjct: 633 FLDMSYNMLSGYIPKEIGSM 652
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 86 NLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
N G + LD+S+N L G IP+ + + L L++ +N +SG +P + L G
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 678
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L + N+++G++ + +L L + N + GIP LG+ L+ LD+S N L G
Sbjct: 180 LAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDF 236
Query: 105 PESLANNAELLFLDVQNNTLSGIVP 129
+++ EL L++ +N G +P
Sbjct: 237 SRAISTCTELKLLNISSNQFVGPIP 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 125/273 (45%), Gaps = 28/273 (10%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
V +G G F V+ G + VAI++I + E+ F++ ++ L H +++L G
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYG 70
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+ +F G LS YL + G + T + + + + +G+ YL +
Sbjct: 71 VCLEQA--PICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA-- 123
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
++HR+L+ L+ + ++D G+ + + DD S T + + +PE +
Sbjct: 124 ---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------RNLKGKFSESE 547
R++ +SD+++FGV++ ++ S ++ E+ + ++ R K + + +
Sbjct: 181 RYSSKSDVWSFGVLMWEVF-------SEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH 233
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
++ C E PE+RP ++ +L A
Sbjct: 234 VYQIMNH---CWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 11/114 (9%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLF 101
+ L + N L+G IP +IGS+ L +L L HN ++G IPD +G+L L LDLS N L
Sbjct: 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693
Query: 102 GTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNGGFQ------FQNNPGLCG 149
G IP++++ L +D+ NN LSG +P G F+ F NNPGLCG
Sbjct: 694 GRIPQAMSALTMLTEIDLSNNNLSGPIPEM-----GQFETFPPAKFLNNPGLCG 742
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLF 101
V L L N L+G IP+ +GSL L L L N L G IP L + L+ L L FN L
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 102 GTIPESLANNAELLFLDVQNNTLSGIVPSALKRL 135
G IP L+N L ++ + NN L+G +P + RL
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 50 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109
N LTG IP+ + + +L+ ++L +NRL G IP +G L L L LS NS G IP L
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535
Query: 110 NNAELLFLDVQNNTLSGIVPSALKRLNG 137
+ L++LD+ N +G +P+A+ + +G
Sbjct: 536 DCRSLIWLDLNTNLFNGTIPAAMFKQSG 563
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L+L N L G IP ++ +K+L L L N L G IP L N L + LS N L G I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 105 PESLANNAELLFLDVQNNTLSGIVPSAL 132
P+ + L L + NN+ SG +P+ L
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAEL 534
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L L N TG IP + + L L L N L+G IP SLG+L KL+ L L N L G I
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 105 PESL--ANNAELLFLDVQNNTLSGIVPSAL 132
P+ L E L LD N L+G +PS L
Sbjct: 459 PQELMYVKTLETLILDF--NDLTGEIPSGL 486
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
+ L N+LTG IP IG L++L++L L +N +G IP LG+ L LDL+ N GTI
Sbjct: 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTI 554
Query: 105 PESL 108
P ++
Sbjct: 555 PAAM 558
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIP-DSLGNLGKLKRLDLSFNSLFGT 103
L L N G +P GS L L L N +G +P D+L + LK LDLSFN G
Sbjct: 299 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358
Query: 104 IPESLAN-NAELLFLDVQNNTLSG-IVPSALKRLNGGFQ---FQNNPGLCGDGIASLRAC 158
+PESL N +A LL LD+ +N SG I+P+ + Q QNN G G +L C
Sbjct: 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN-GFTGKIPPTLSNC 417
Query: 159 T 159
+
Sbjct: 418 S 418
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 1 MEGFYFLDECGIHGKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQI 60
M G LD + F EFS ++ + + ++ L L N +G I +
Sbjct: 342 MRGLKVLD--------LSFNEFSGELPESLTNLSASLL-----TLDLSSNNFSGPILPNL 388
Query: 61 --GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118
+L L LQ+N G IP +L N +L L LSFN L GTIP SL + ++L L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 119 VQNNTLSGIVPSAL 132
+ N L G +P L
Sbjct: 449 LWLNMLEGEIPQEL 462
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 44 VLQLCCNQLTGNIPAQIGSLK-SLSVLTLQHNRLNGGIPDSLGNLGK--LKRLDLSFNSL 100
VL L N+ +G +P + +L SL L L N +G I +L K L+ L L N
Sbjct: 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406
Query: 101 FGTIPESLANNAELLFLDVQNNTLSGIVPSALKRL 135
G IP +L+N +EL+ L + N LSG +PS+L L
Sbjct: 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 46/140 (32%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSL----------------- 84
+L+L N +GNIPA++G +SL L L N NG IP ++
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 85 ---------------GNL--------GKLKRL------DLSFNSLFGTIPESLANNAELL 115
GNL +L RL +++ G + NN ++
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 116 FLDVQNNTLSGIVPSALKRL 135
FLD+ N LSG +P + +
Sbjct: 636 FLDMSYNMLSGYIPKEIGSM 655
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L + N+++G++ + +L L + N + GIP LG+ L+ LD+S N L G
Sbjct: 183 LAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDF 239
Query: 105 PESLANNAELLFLDVQNNTLSGIVP 129
+++ EL L++ +N G +P
Sbjct: 240 SRAISTCTELKLLNISSNQFVGPIP 264
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 86 NLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
N G + LD+S+N L G IP+ + + L L++ +N +SG +P + L G
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRG 681
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 22/275 (8%)
Query: 310 CFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
C ++G G F V G L+ VAI+++ + + +F+ ++ H
Sbjct: 8 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 67
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
N+I L G +I +F G L +L Q +G V+ V ++ GIA G+
Sbjct: 68 PNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAAGM 122
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI----VFSVLKTSAA 481
YL +++N VHR L+ +L++ ++D GL + L DD S L
Sbjct: 123 KYL--ADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541
+ + APE + +FT SD++++G+++ ++++ M + N I+++ +
Sbjct: 178 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM----TNQDVINAIEQDYRL 233
Query: 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ L ++ L C +D +RP ++ L
Sbjct: 234 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 311 FSEVNLLGKGNFSSV----YKGTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
++ LG+G+F V Y T DGT +VA++++ + + + + +L +L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE-GSSNVLDWSTRVSIIIGIAK 423
HE+II+ +G C +G L+ ++ P G L YL + G + +L ++ + I +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ------ICE 128
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAA 481
G+ YLHS +HRNL+ VL+D I D GL K + + + ++ +
Sbjct: 129 GMAYLHSQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +F SD+++FGV + ++LT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIR-SINVTSCKSEEAEF---VKGLYLLTSLRH 365
++ +LG G F +V+KG + +G + I I V KS F + + SL H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSN---VLDWSTRVSIIIGIA 422
+I+RL G C L+ + P G L ++ Q G+ +L+W + IA
Sbjct: 75 AHIVRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IA 125
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD---IVFSVLKTS 479
KG+ YL +VHRNL+ VL+ +AD G+ LL D +++S KT
Sbjct: 126 KGMYYLEEH-----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 480 AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
+ ++A E + G++T +SD++++GV + +++T + +RLA E
Sbjct: 181 --IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE------- 231
Query: 540 KG-KFSESEAAKLG-KMALV-CTHEDPENRPTMEAVIEELTVAA 580
KG + ++ + + M +V C D RPT + + E T A
Sbjct: 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIR-SINVTSCKSEEAEF---VKGLYLLTSLRH 365
++ +LG G F +V+KG + +G + I I V KS F + + SL H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSN---VLDWSTRVSIIIGIA 422
+I+RL G C L+ + P G L ++ Q G+ +L+W + IA
Sbjct: 93 AHIVRLLGLCPG---SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IA 143
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD---IVFSVLKTS 479
KG+ YL +VHRNL+ VL+ +AD G+ LL D +++S KT
Sbjct: 144 KGMYYLEEH-----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 480 AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA 525
+ ++A E + G++T +SD++++GV + +++T + +RLA
Sbjct: 199 --IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 90 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 140
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 200 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 255
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 256 SCWHEKADERPTFKILL 272
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 55/308 (17%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFV--KGLYLLTSLRHENIIRL 371
+ L+G+G + +VYKG+L D VA++ + + ++ F+ K +Y + + H+NI R
Sbjct: 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN----FINEKNIYRVPLMEHDNIARF 72
Query: 372 ---RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
+ GR E L+ ++ P G L KYL S + DW + + + +G+ YL
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 429 HSS----EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH-KLLADDIVFSVLKTSAAMG 483
H+ + KPAI HR+L+ VL+ +I+D GL +L + +V + +AA+
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 484 ------YLAPEYVTTGRFTERS--------DIFAFGVIILQILT-------GSLVLTSSM 522
Y+APE V G R D++A G+I +I G V M
Sbjct: 188 EVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246
Query: 523 RLAAESATFENFIDRNL-----KGKFSESEAAKLGKMALV--------CTHEDPENRPTM 569
E F D + K + EA K +A+ C +D E R T
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306
Query: 570 EAVIEELT 577
+ E +
Sbjct: 307 QXAEERMA 314
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 74 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 124
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 184 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 239
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 240 SCWHEKADERPTFKILL 256
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 75 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 125
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 185 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 240
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 241 SCWHEKADERPTFKILL 257
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ + G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 80 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 131 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 81 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 132 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 78 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 128
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 129 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 130 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 81 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 131
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 191 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 246
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 247 SCWHEKADERPTFKILL 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 70 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 120
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 180 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 235
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 236 SCWHEKADERPTFKILL 252
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 311 FSEVNLLGKGNFSSV----YKGTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
++ LG+G+F V Y T DGT +VA++++ + + + + +L +L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY 74
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE-GSSNVLDWSTRVSIIIGIAK 423
HE+II+ +G C +G L+ ++ P G L YL + G + +L ++ + I +
Sbjct: 75 HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ------ICE 128
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAA 481
G+ YLH+ +HRNL+ VL+D I D GL K + + + ++ +
Sbjct: 129 GMAYLHAQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +F SD+++FGV + ++LT
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + + YL S +
Sbjct: 90 KQR--PIFIITEYMANGCLLNYLRE---MRHRFQTQQLLEMCKDVCEAMEYLESKQ---- 140
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + + PE + +F+
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 200 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 255
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 256 SCWHEKADERPTFKILL 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ + G L +L + + V+ V ++ GIA G+ YL
Sbjct: 111 LEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 166 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 274
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 83 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 133
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 134 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 87 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 137
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 138 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 131 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 32/241 (13%)
Query: 283 YLNGTGFSREHLNSFRLN-LEEVESATQCFSEVNLLGKGNFSSVYKGTL-----RDGTLV 336
Y G+G E N L L+E E F ++ +LG G F +VYKG + V
Sbjct: 21 YFQGSG---EAPNQALLRILKETE-----FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 72
Query: 337 AIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLS 396
AI+ + + E + Y++ S+ + ++ RL G C + LI P G L
Sbjct: 73 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLL 129
Query: 397 KYLDQEE---GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 453
Y+ + + GS +L+W + IAKG+ YL +VHR+L+ VL+
Sbjct: 130 DYVREHKDNIGSQYLLNWC------VQIAKGMNYLEDRR-----LVHRDLAARNVLVKTP 178
Query: 454 FNPLIADCGLHKLL-ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ I D GL KLL A++ + + ++A E + +T +SD++++GV + +++
Sbjct: 179 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 238
Query: 513 T 513
T
Sbjct: 239 T 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 131 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 79 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 130 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 315 NLLGKGNFSSVYKGTLR--DGT--LVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENII 369
+LG+G F SV +G L+ DGT VA++++ + S + E EF+ + H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 370 RLRGFC---CSRGRGECFLIYDFAPKGKLSKYL--DQEEGSSNVLDWSTRVSIIIGIAKG 424
RL G C S+G + +I F G L YL + E + T + ++ IA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL-HKLLADDIVFSVLKTSAAMG 483
+ YL + +HR+L+ ++ +AD GL K+ + D +
Sbjct: 160 MEYLSNRN-----FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++A E + +T +SD++AFGV + +I T + ++ +++ + K
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP----GVQNHEMYDYLLHGHRLKQ 270
Query: 544 SESEAAKLGKMALVCTHEDPENRPTMEAV---IEELTVAAP 581
E +L ++ C DP +RPT + +E+L + P
Sbjct: 271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 24/267 (8%)
Query: 315 NLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
++G G F V G L+ VAI+++ V + + +F+ ++ H NIIR
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++ + G L +L + + V+ V ++ GIA G+ YL
Sbjct: 82 LEGVVTKSK--PVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVLKTSAAMGYLAPE 488
VHR+L+ +LI+ ++D GL ++L DD ++ + + +PE
Sbjct: 137 M-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--NFIDRNLKGKFSES 546
+ +FT SD++++G+++ + V++ R E + + +D +
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWE------VMSYGERPYWEMSNQDVIKAVDEGYRLPPPMD 245
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVI 573
A L ++ L C +D NRP E ++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 135 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 130
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 131 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 71 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 121
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 122 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G R VAI+ I S E EF++ ++ +L HE +++L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ F+I ++ G L YL + + + + + + YL S +
Sbjct: 75 KQR--PIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---- 125
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L++ Q ++D GL + + DD S + + + PE + +F+
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMAL 556
+SDI+AFGV++ +I SL R S T E+ I + L+ + K+ +
Sbjct: 185 SKSDIWAFGVLMWEIY--SLGKMPYERF-TNSETAEH-IAQGLRLYRPHLASEKVYTIMY 240
Query: 557 VCTHEDPENRPTMEAVI 573
C HE + RPT + ++
Sbjct: 241 SCWHEKADERPTFKILL 257
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI + + E + Y++ S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 111 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 161
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 162 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSE-----EAEFVKGLYLLTSLRHENII 369
+LG+G F VY+G + I ++ V +CK + + +F+ ++ +L H +I+
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKI-NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L G ++I + P G+L YL++ + S VL T V + I K + YL
Sbjct: 89 KLIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLE 142
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEY 489
S +N VHR+++V +L+ + D GL + + D+ + T + +++PE
Sbjct: 143 S--IN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 490 VTTGRFTERSDIFAFGVIILQILT 513
+ RFT SD++ F V + +IL+
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILS 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 41/284 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F E+ L+G G F V+K R DG I+ + + K+E + + L L H NI+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNIV 67
Query: 370 RLRGFC--------------CSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
G C SR + +C F+ +F KG L +++++ G LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLA 124
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
+ + I KG+ Y+HS + +++R+L + + I D GL L +D
Sbjct: 125 LELFEQITKGVDYIHSKK-----LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--GK 177
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
++ + Y++PE +++ + + D++A G+I+ ++L V ++ S F +
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFET---SKFFTDL 231
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578
D + F + E L K+ + PE+RP ++ LTV
Sbjct: 232 RDGIISDIFDKKEKTLLQKLL----SKKPEDRPNTSEILRTLTV 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGL 357
+E+E++ C + ++G G F V G L+ VAI+++ V + + +F+
Sbjct: 17 KEIEAS--CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEA 74
Query: 358 YLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSI 417
++ H NII L G ++ ++ G L +L + +G V+ V +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSK--PVMIVTEYMENGSLDTFLKKNDGQFTVIQ---LVGM 129
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSV 475
+ GI+ G+ YL VHR+L+ +LI+ ++D GL ++L DD ++
Sbjct: 130 LRGISAGMKYLSDM-----GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 476 LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +FT SD++++G+++ ++++
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 81 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 131
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 132 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 316 LLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSE-----EAEFVKGLYLLTSLRHENIIR 370
+LG+G F VY+G + I ++ V +CK + + +F+ ++ +L H +I++
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKI-NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++I + P G+L YL++ + S VL T V + I K + YL S
Sbjct: 74 LIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES 127
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
+N VHR+++V +L+ + D GL + + D+ + T + +++PE +
Sbjct: 128 --IN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 491 TTGRFTERSDIFAFGVIILQILT 513
RFT SD++ F V + +IL+
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILS 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 74 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 124
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
+G+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 125 EGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 130 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 130 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 316 LLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSE-----EAEFVKGLYLLTSLRHENIIR 370
+LG+G F VY+G + I ++ V +CK + + +F+ ++ +L H +I++
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKI-NVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G ++I + P G+L YL++ + S VL T V + I K + YL S
Sbjct: 78 LIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES 131
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
+N VHR+++V +L+ + D GL + + D+ + T + +++PE +
Sbjct: 132 --IN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 491 TTGRFTERSDIFAFGVIILQILT 513
RFT SD++ F V + +IL+
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILS 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +L G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 84 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 135 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 22/269 (8%)
Query: 316 LLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
++G G F V +G L+ + VAI+++ + + EF+ ++ H NIIRL
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G + ++ +F G L +L +G V+ V ++ GIA G+ YL
Sbjct: 81 EGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYLAEM 135
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL----ADDIVFSVLKTSAAMGYLAP 487
+ VHR+L+ +L++ ++D GL + L +D S L + + AP
Sbjct: 136 -----SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 488 EYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547
E + +FT SD +++G+++ ++++ M + N I+++ +
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM----SNQDVINAIEQDYRLPPPPDC 246
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEEL 576
L ++ L C +D RP V+ L
Sbjct: 247 PTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGF 374
++G+G F V K R VAI+ I +SE F+ L L+ + H NI++L G
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEG-----SSNVLDWSTRVSIIIGIAKGIGYLH 429
C + L+ ++A G L L E +++ + W + S +G+ YLH
Sbjct: 71 CLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS------QGVAYLH 120
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
S + A++HR+L +L+ L I D G A DI + + ++APE
Sbjct: 121 SMQPK--ALIHRDLKPPNLLLVAGGTVLKICDFGT----ACDIQTHMTNNKGSAAWMAPE 174
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 548
++E+ D+F++G+I+ +++T + + + + ++
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDE---IGGPAFRIMWAVHNGTRPPLIKNLP 231
Query: 549 AKLGKMALVCTHEDPENRPTMEAVIEELT 577
+ + C +DP RP+ME +++ +T
Sbjct: 232 KPIESLMTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 79 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 130 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F E+ L+G G F V+K R DG IR + + K+E + + L L H NI+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-----REVKALAKLDHVNIV 68
Query: 370 RLRGFC---------------------------CSRGRGEC-FLIYDFAPKGKLSKYLDQ 401
G C SR + +C F+ +F KG L +++++
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461
G LD + + I KG+ Y+HS + ++HR+L + + I D
Sbjct: 128 RRGEK--LDKVLALELFEQITKGVDYIHSKK-----LIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521
GL L +D ++ + Y++PE +++ + + D++A G+I+ ++L V ++
Sbjct: 181 GLVTSLKND--GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTA 235
Query: 522 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578
S F + D + F + E L K+ + PE+RP ++ LTV
Sbjct: 236 FET---SKFFTDLRDGIISDIFDKKEKTLLQKLL----SKKPEDRPNTSEILRTLTV 285
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 135 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +L G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +L G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 134
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL KLL A++ +
Sbjct: 135 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
F ++ +LG G F +VYKG + VAI+ + + E + Y++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE---GSSNVLDWSTRVSIIIGIA 422
++ RL G C + LI P G L Y+ + + GS +L+W + IA
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQIA 127
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D G KLL A++ +
Sbjct: 128 KGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T +SD++++GV + +++T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGF 374
++G+G F V K R VAI+ I +SE F+ L L+ + H NI++L G
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEG-----SSNVLDWSTRVSIIIGIAKGIGYLH 429
C + L+ ++A G L L E +++ + W + S +G+ YLH
Sbjct: 70 CLN----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS------QGVAYLH 119
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
S + A++HR+L +L+ L I D G A DI + + ++APE
Sbjct: 120 SMQPK--ALIHRDLKPPNLLLVAGGTVLKICDFGT----ACDIQTHMTNNKGSAAWMAPE 173
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEA 548
++E+ D+F++G+I+ +++T + + + + ++
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDE---IGGPAFRIMWAVHNGTRPPLIKNLP 230
Query: 549 AKLGKMALVCTHEDPENRPTMEAVIEELT 577
+ + C +DP RP+ME +++ +T
Sbjct: 231 KPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDG----TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH 365
+V +LG G F +VYKG + DG VAI+ + + E + Y++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG---SSNVLDWSTRVSIIIGIA 422
+ RL G C + L+ P G L ++ + G S ++L+W + IA
Sbjct: 79 PYVSRLLGICLT---STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IA 129
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVLKTSAA 481
KG+ YL +VHR+L+ VL+ + I D GL +LL D+ +
Sbjct: 130 KGMSYLEDVR-----LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP 184
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + RFT +SD++++GV + +++T
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 22/269 (8%)
Query: 316 LLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
++G G F V +G L+ + VAI+++ + + EF+ ++ H NIIRL
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G + ++ +F G L +L +G V+ V ++ GIA G+ YL
Sbjct: 83 EGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYLAEM 137
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL----ADDIVFSVLKTSAAMGYLAP 487
+ VHR+L+ +L++ ++D GL + L +D S L + + AP
Sbjct: 138 -----SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 488 EYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547
E + +FT SD +++G+++ ++++ M + N I+++ +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM----SNQDVINAIEQDYRLPPPPDC 248
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEEL 576
L ++ L C +D RP V+ L
Sbjct: 249 PTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 71 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 128
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+ + IA G+ YL N VHRNL+ ++ F I D G+ + +
Sbjct: 129 TLQEMIQMAAEIADGMAYL-----NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 236
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P RPT ++
Sbjct: 237 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 70 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+ + IA G+ YL N VHRNL+ ++ F I D G+ + +
Sbjct: 128 TLQEMIQMAAEIADGMAYL-----NAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 235
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P RPT ++
Sbjct: 236 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 311 FSEVNLLGKGNFSSV----YKGTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
++ LG+G+F V Y T DGT +VA++++ + + + + + +L +L
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY 91
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE-GSSNVLDWSTRVSIIIGIAK 423
HE+II+ +G C G L+ ++ P G L YL + G + +L ++ + I +
Sbjct: 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ------ICE 145
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAA 481
G+ YLH+ +HR+L+ VL+D I D GL K + + ++ +
Sbjct: 146 GMAYLHAQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +F SD+++FGV + ++LT
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 25/305 (8%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR--DGTLV--AIR 339
L+ G S E + LE+V Q F+ +LGKG F SV + L+ DG+ V A++
Sbjct: 2 LDSLGISDE----LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVK 57
Query: 340 SINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGFCC-SRGRGEC---FLIYDFAPKGK 394
+ S + EF++ + H ++ +L G SR +G +I F G
Sbjct: 58 MLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117
Query: 395 LSKYLDQEEGSSNV--LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
L +L N L T V ++ IA G+ YL S +HR+L+ ++ +
Sbjct: 118 LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-----FIHRDLAARNCMLAE 172
Query: 453 QFNPLIADCGL-HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 511
+AD GL K+ + D + + +LA E + +T SD++AFGV + +I
Sbjct: 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
Query: 512 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEA 571
+T + + E+A N++ + K ++ + C DP+ RP+
Sbjct: 233 MTRGQTPYAGI----ENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTC 288
Query: 572 VIEEL 576
+ EL
Sbjct: 289 LRMEL 293
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 37/283 (13%)
Query: 316 LLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+LGKG F K T R+ V + + + + F+K + ++ L H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
R I ++ G L + + WS RVS IA G+ YLHS
Sbjct: 77 YKDKRLN--FITEYIKGGTLRGIIKSMDSQ---YPWSQRVSFAKDIASGMAYLHSMN--- 128
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI-----VFSVLKTSAAMGY------ 484
I+HR+L+ L+ + N ++AD GL +L+ D+ + S+ K Y
Sbjct: 129 --IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 485 --LAPEYVTTGRFTERSDIFAFGVIILQIL----TGSLVLTSSMRLAAESATFENFIDRN 538
+APE + + E+ D+F+FG+++ +I+ L +M F+DR
Sbjct: 187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG---LNVRGFLDRY 243
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPT---MEAVIEELTV 578
S + + C DPE RP+ +E +E L +
Sbjct: 244 CPPNCPPS----FFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 72 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 470 -DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 63 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + + +
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 470 -DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 71 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 70 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+ + IA G+ YL N VHR+L+ ++ F I D G+ + + +
Sbjct: 128 TLQEMIQMAAEIADGMAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 470 -DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 235
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P+ RPT ++
Sbjct: 236 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 69 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 100 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 78 EASVMKEFNCHHVVRLLG-VVSQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 72 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 67 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+ + IA G+ YL N VHR+L+ ++ F I D G+ + + +
Sbjct: 125 TLQEMIQMAAEIADGMAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 470 -DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 232
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P+ RPT ++
Sbjct: 233 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 70 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+ + IA G+ YL N VHR+L+ ++ F I D G+ + +
Sbjct: 128 TLQEMIQMAAEIADGMAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 235
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P+ RPT ++
Sbjct: 236 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 65 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 70 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+ + IA G+ YL N VHR+L+ ++ F I D G+ +
Sbjct: 128 TLQEMIQMAAEIADGMAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 470 DIVFSVLKTSAAMG-----YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
DI + G ++APE + G FT SD+++FGV++ +I TS
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQ 231
Query: 525 AAESATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ + E + + G + + ++ + +C +P+ RPT ++
Sbjct: 232 PYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 317 LGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
LG GNF SV +G R VAI+ + + K++ E ++ ++ L + I+RL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
C + L+ + A G L K+L G + S ++ ++ G+ YL
Sbjct: 404 VCQAEA---LMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEKN- 456
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYVT 491
VHRNL+ VL+ + I+D GL K L D + +++ + + APE +
Sbjct: 457 ----FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 492 TGRFTERSDIFAFGVIILQILT 513
+F+ RSD++++GV + + L+
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALS 534
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 71 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 30/288 (10%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVK 355
+E E + + + + LG+G+F VY+G RD T VA++++N ++ E EF+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----L 409
++ +++RL G S+G+ ++ + G L YL + E +N
Sbjct: 70 EASVMKGFTCHHVVRLLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD 469
+ + IA G+ YL N VHR+L+ ++ F I D G+ + + +
Sbjct: 128 TLQEMIQMAAEIADGMAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 470 -DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
D K + ++APE + G FT SD+++FGV++ +I TS +
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQG 235
Query: 529 ATFENFIDRNLKGKFSESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ E + + G + + ++ + +C +P RPT ++
Sbjct: 236 LSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 336 VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGK- 394
VAI+ IN+ C++ E +K + ++ H NI+ + + E +L+ G
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YTSFVVKDELWLVMKLLSGGSV 95
Query: 395 ---LSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 451
+ + + E S VLD ST +I+ + +G+ YLH K +HR++ +L+
Sbjct: 96 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH-----KNGQIHRDVKAGNILLG 150
Query: 452 QQFNPLIADCGLHKLLAD--DIVFSVLKTS--AAMGYLAPEYVTTGR-FTERSDIFAFGV 506
+ + IAD G+ LA DI + ++ + ++APE + R + ++DI++FG+
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 507 IILQILTGSLVLTSSMRLAAESATFEN--------FIDRNLKGKFSESEAAKLGKMALVC 558
+++ TG+ + T +N D+ + K+ +S KM +C
Sbjct: 211 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS----FRKMISLC 266
Query: 559 THEDPENRPT 568
+DPE RPT
Sbjct: 267 LQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 336 VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGK- 394
VAI+ IN+ C++ E +K + ++ H NI+ + + E +L+ G
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YTSFVVKDELWLVMKLLSGGSV 100
Query: 395 ---LSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 451
+ + + E S VLD ST +I+ + +G+ YLH K +HR++ +L+
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH-----KNGQIHRDVKAGNILLG 155
Query: 452 QQFNPLIADCGLHKLLAD--DIVFSVLKTS--AAMGYLAPEYVTTGR-FTERSDIFAFGV 506
+ + IAD G+ LA DI + ++ + ++APE + R + ++DI++FG+
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 507 IILQILTGSLVLTSSMRLAAESATFEN--------FIDRNLKGKFSESEAAKLGKMALVC 558
+++ TG+ + T +N D+ + K+ +S KM +C
Sbjct: 216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS----FRKMISLC 271
Query: 559 THEDPENRPT 568
+DPE RPT
Sbjct: 272 LQKDPEKRPT 281
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 64
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 63
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 102
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 157
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 69
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 66
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 30/213 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG F V++G R G VA++ + S + E + F + +Y LRHENI+ GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENIL---GFI 89
Query: 376 CSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + + +L+ D+ G L YL++ + + + + + A G+ +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 144
Query: 431 SEVN---KPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
V KPAI HR+L + +L+ + IAD GL H D I + Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 485 LAPEY----VTTGRFT--ERSDIFAFGVIILQI 511
+APE + F +R+DI+A G++ +I
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 116/260 (44%), Gaps = 22/260 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V G + VA++ I S E EF + + L H +++ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+++ ++ G L YL L+ S + + + +G+ +L S +
Sbjct: 74 KEY--PIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---- 124
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
+HR+L+ L+D+ ++D G+ + + DD S + T + + APE +++
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 497 ERSDIFAFGVIILQILT-GSLV--LTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
+SD++AFG+++ ++ + G + L ++ + + + +L + + +
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLA-------SDTIYQ 236
Query: 554 MALVCTHEDPENRPTMEAVI 573
+ C HE PE RPT + ++
Sbjct: 237 IMYSCWHELPEKRPTFQQLL 256
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQE-----EGSSNV-------LDWSTRV 415
II L G C G ++I ++A KG L +YL E S ++ + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D +
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IIHLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 311 FSEVNLLGKGNFSSV----YKGTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
++ LG+G+F V Y T DGT +VA++++ + + + + +L +L
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 68
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQE-EGSSNVLDWSTRVSIIIGIAK 423
HE+I++ +G C +G L+ ++ P G L YL + G + +L ++ + I +
Sbjct: 69 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ------ICE 122
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAA 481
G+ YLH+ +HR L+ VL+D I D GL K + + + ++ +
Sbjct: 123 GMAYLHAQH-----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +F SD+++FGV + ++LT
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 311 FSEVNLLGKGNFSSV----YKGTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
++ LG+G+F V Y T DGT +VA++++ + + + + +L +L
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY 69
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQE-EGSSNVLDWSTRVSIIIGIAK 423
HE+I++ +G C +G L+ ++ P G L YL + G + +L ++ + I +
Sbjct: 70 HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ------ICE 123
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAA 481
G+ YLH+ +HR L+ VL+D I D GL K + + + ++ +
Sbjct: 124 GMAYLHAQH-----YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +F SD+++FGV + ++LT
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + E +N +
Sbjct: 65 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ + + F I D G+ + +
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
E C ++G G F V G L+ VAI+++ + +F+ ++
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 361 TSLRHENIIRLRGFC--CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
H NII L G C +I ++ G L +L + +G V+ V ++
Sbjct: 85 GQFDHPNIIHLEGVVTKCK----PVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGML 137
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVL 476
GI G+ YL + VHR+L+ +L++ ++D G+ ++L DD ++
Sbjct: 138 RGIGSGMKYLSDM-----SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +FT SD++++G+++ ++++
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + ++N +
Sbjct: 78 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 30/273 (10%)
Query: 317 LGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G+F VY+G RD T VA++++N ++ E EF+ ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNV----LDWSTRVSIIIGIAKG 424
L G S+G+ ++ + G L YL + E +N + + IA G
Sbjct: 84 LLG-VVSKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLADDIVFSVLKTSAAMG 483
+ YL N VHR+L+ ++ F I D G+ + + D K +
Sbjct: 142 MAYL-----NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++APE + G FT SD+++FGV++ +I TS + + E + + G +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEI-------TSLAEQPYQGLSNEQVLKFVMDGGY 249
Query: 544 SESE---AAKLGKMALVCTHEDPENRPTMEAVI 573
+ ++ + +C +P+ RPT ++
Sbjct: 250 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
E C ++G G F V G L+ VAI+++ + +F+ ++
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 361 TSLRHENIIRLRGFC--CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
H NII L G C +I ++ G L +L + +G V+ V ++
Sbjct: 70 GQFDHPNIIHLEGVVTKCK----PVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGML 122
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVL 476
GI G+ YL + VHR+L+ +L++ ++D G+ ++L DD ++
Sbjct: 123 RGIGSGMKYLSDM-----SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +FT SD++++G+++ ++++
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS--------SNVLDWSTRVSIIIGI 421
L G C G G +I +F G LS YL + + L + +
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA- 480
AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 154 AKGMEFLASRKX-----IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY-VRKGDAR 207
Query: 481 -AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FXRRLKEGT 264
Query: 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
E C ++G G F V G L+ VAI+++ + +F+ ++
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 361 TSLRHENIIRLRGFC--CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
H NII L G C +I ++ G L +L + +G V+ V ++
Sbjct: 64 GQFDHPNIIHLEGVVTKCK----PVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGML 116
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD--IVFSVL 476
GI G+ YL + VHR+L+ +L++ ++D G+ ++L DD ++
Sbjct: 117 RGIGSGMKYLSDM-----SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ + APE + +FT SD++++G+++ ++++
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 90 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 148 SCTYQLARGMEYLASQKC-----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 258
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 259 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVY----KGTLRDG--TLVAIRSINVTSCKSEEAEFVK 355
+E E A + + LG+G+F VY KG ++D T VAI+++N + E EF+
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD--QEEGSSNVLDWST 413
++ +++RL G S+G+ +I + +G L YL + ++N +
Sbjct: 68 EASVMKEFNCHHVVRLLG-VVSQGQ-PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 414 RVSIIIG----IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-LLA 468
+S +I IA G+ YL++++ VHR+L+ ++ + F I D G+ + +
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D K + +++PE + G FT SD+++FGV++ +I T
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 103 IITLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 315 NLLGKGNFSSVYKGTLRDGTL---VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIR 370
+++G+GNF V K ++ L AI+ + + K + +F L +L L H NII
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRVSII 418
L G C RG +L ++AP G L +L + +++ L +
Sbjct: 88 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
+A+G+ YL + +HRNL+ +L+ + + IAD GL + ++
Sbjct: 146 ADVARGMDYLSQKQ-----FIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 198
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T SD++++GV++ +I++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 318 GKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS 377
+G F V+K L + VA++ + +S + E+ +Y L ++HENI++ F +
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQ---FIGA 86
Query: 378 RGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS- 431
RG + +LI F KG LS +L +NV+ W+ I +A+G+ YLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 432 ----EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
+ +KPAI HR++ + VL+ IAD GL L + S T +G Y
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL--ALKFEAGKSAGDTHGQVGTRRY 199
Query: 485 LAPEYVTTGRFTERS-----DIFAFGVIILQI 511
+APE + +R D++A G+++ ++
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 92 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 150 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 260
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 261 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 317 LGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
LG GNF SV +G R VAI+ + + K++ E ++ ++ L + I+RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYL---DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
C + L+ + A G L K+L +E SNV + +VS+ G+ YL
Sbjct: 78 VCQAEA---LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM------GMKYLEE 128
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPE 488
VHR+L+ VL+ + I+D GL K L D + +++ + + APE
Sbjct: 129 KN-----FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 489 YVTTGRFTERSDIFAFGVIILQILT 513
+ +F+ RSD++++GV + + L+
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 149 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 207 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 317
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 318 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL D + + V
Sbjct: 95 IINLLGACTQDG--PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 153 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 263
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 264 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 119/282 (42%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRV 415
II L G C G ++I ++A KG L +YL E L V
Sbjct: 96 IINLLGACTQDG--PLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + D
Sbjct: 154 SCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKL 264
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 265 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I +A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 307 ATQCFSEVNLLGKGNF-SSVYKGTLRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLR 364
+ + + + +G+G+F ++ + DG I+ IN++ S+E E + + +L +++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG----SSNVLDWSTRVSIIIG 420
H NI++ R G +++ D+ G L K ++ ++G +LDW +
Sbjct: 82 HPNIVQYRE--SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQ 133
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I + ++H + I+HR++ + + + + + D G+ ++L + + A
Sbjct: 134 ICLALKHVHDRK-----ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA----RA 184
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
+G YL+PE + +SDI+A G ++ ++ T ++ A E+ + +N + +
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT--------LKHAFEAGSMKNLVLK 236
Query: 538 NLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582
+ G F S + L + +P +RP++ +++E+ +A +
Sbjct: 237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 137 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL- 193
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 194 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 300
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 301 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 33/282 (11%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K ++ VA++ + + + + ++ V + ++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRV 415
II L G C G ++I +A KG L +YL D + + V
Sbjct: 103 IINLLGACTQDG--PLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFS 474
S +A+G+ YL S + +HR+L+ VL+ + IAD GL + + + D
Sbjct: 161 SCTYQLARGMEYLASQKC-----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 475 VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
+ ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKL 271
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS--------SNVLDWSTRVSIIIGI 421
L G C G G +I +F G LS YL + + L + +
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA- 480
AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 154 AKGMEFLASRKX-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDAR 207
Query: 481 -AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEGT 264
Query: 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 265 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 317 LGKGNFSSVYKG------TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G F V+ +D LVA++++ + + + +F + LLT+L+HE+I++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK-DFQREAELLTNLQHEHIVK 81
Query: 371 LRGFCCSRGRGE-CFLIYDFAPKGKLSKYLD------------QEEGSSNVLDWSTRVSI 417
G C G G+ +++++ G L+K+L Q + L S + I
Sbjct: 82 FYGVC---GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL- 476
IA G+ YL S VHR+L+ L+ I D G+ + + + V
Sbjct: 139 ASQIASGMVYLASQH-----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
T + ++ PE + +FT SD+++FGVI+ +I T
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 81 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL- 137
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 138 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 244
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 245 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 79 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA--MGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 132 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 239
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 240 PREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 96 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL- 152
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 153 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 259
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 85 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL- 141
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 142 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 248
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 249 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 315 NLLGKGNFSSVYKGTLRDGTL---VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIR 370
+++G+GNF V K ++ L AI+ + + K + +F L +L L H NII
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRVSII 418
L G C RG +L ++AP G L +L + +++ L +
Sbjct: 81 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
+A+G+ YL + +HR+L+ +L+ + + IAD GL + ++
Sbjct: 139 ADVARGMDYLSQKQ-----FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 191
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T SD++++GV++ +I++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 315 NLLGKGNFSSVYKGTLRDGTL---VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIR 370
+++G+GNF V K ++ L AI+ + + K + +F L +L L H NII
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRVSII 418
L G C RG +L ++AP G L +L + +++ L +
Sbjct: 91 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
+A+G+ YL + +HR+L+ +L+ + + IAD GL + ++
Sbjct: 149 ADVARGMDYLSQKQ-----FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 201
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++A E + +T SD++++GV++ +I++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 437 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 489
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 490 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 597
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 598 PREMYDLMNLCWTYDVENRPGFAAV 622
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 73 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 125
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA--MGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 126 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 233
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 234 PREMYDLMNLCWTYDVENRPGFAAV 258
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 438 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 490
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 491 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 598
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 599 PREMYDLMNLCWTYDVENRPGFAAV 623
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 88 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL- 144
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 145 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 251
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 252 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 96 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL- 152
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 153 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 259
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 93 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 145
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 146 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 253
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 254 PREMYDLMNLCWTYDVENRPGFAAV 278
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 96 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL- 152
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 153 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 259
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 43/287 (14%)
Query: 317 LGKGNFSSVY--------KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
LG+G F V K T VA++ + + + + ++ + + ++ + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-----------------QEEGSSNVLD 410
II L G C G ++I ++A KG L +YL +E+ SS L
Sbjct: 89 IINLLGACTQDG--PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL- 145
Query: 411 WSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD- 469
VS +A+G+ YL S + +HR+L+ VL+ + IAD GL + +
Sbjct: 146 ----VSCAYQVARGMEYLASKKC-----IHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
D + ++APE + +T +SD+++FGV++ +I T L S
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVE 252
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + +L M C H P RPT + ++E+L
Sbjct: 253 ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 85 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 137
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA--MGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 138 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 245
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 246 PREMYDLMNLCWTYDVENRPGFAAV 270
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 75 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 127
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA--MGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 128 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 235
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAV 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K
Sbjct: 154 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRK 207
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 264
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+ F VYKG L VAI+++ + EF L L+H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRVSII 418
L G +I+ + G L ++L D + + L+ V ++
Sbjct: 94 LLGVVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
IA G+ YL S V VH++L+ VL+ + N I+D GL + + + +L
Sbjct: 152 AQIAAGMEYLSSHHV-----VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 479 SA-AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
S + ++APE + G+F+ SDI+++GV++ ++ + L
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 95 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 148 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 255
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 256 PREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 95 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 147
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D + +T + + APE +
Sbjct: 148 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 255
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 256 PREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 37/280 (13%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHEN 367
F V LGKG F +VY + + A++ + + + E E + + + + + LRH N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+R+ + R R +L+ +FAP+G+L K L Q+ G D + + +A + Y
Sbjct: 76 ILRMYNYFHDRKR--IYLMLEFAPRGELYKEL-QKHGR---FDEQRSATFMEELADALHY 129
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-------A 480
H +V +HR++ E +L+ + IAD G +SV S
Sbjct: 130 CHERKV-----IHRDIKPENLLMGYKGELKIADFG----------WSVHAPSLRRRXMCG 174
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ YL PE + E+ D++ GV+ + L G S + + T ++ +LK
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS----PSHTETHRRIVNVDLK 230
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
S+ +K L+ H P R ++ V+E V A
Sbjct: 231 FPPFLSDGSKDLISKLLRYH--PPQRLPLKGVMEHPWVKA 268
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 132 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K
Sbjct: 191 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRK 244
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 301
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 302 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 29/279 (10%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYL----------DQEEGSSNVLDWSTRVSIII 419
L G C G G +I +F G LS YL E+ + L +
Sbjct: 97 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 479
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 156 QVAKGMEFLASRKX-----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKGD 209
Query: 480 A--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKE 266
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+ F VYKG L VAI+++ + EF L L+H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYL------------DQEEGSSNVLDWSTRVSII 418
L G +I+ + G L ++L D + + L+ V ++
Sbjct: 77 LLGVVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
IA G+ YL S V VH++L+ VL+ + N I+D GL + + + +L
Sbjct: 135 AQIAAGMEYLSSHHV-----VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 479 SA-AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
S + ++APE + G+F+ SDI+++GV++ ++ + L
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 86 NLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K
Sbjct: 145 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRK 198
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 255
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 97 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K
Sbjct: 156 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRK 209
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 266
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G F V+ +D LVA++++ S +S +F + LLT L+H++I+R
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVR 107
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ-----------EEGSSNVLDWSTRVSIII 419
G C+ GR +++++ G L+++L E+ + L +++
Sbjct: 108 FFG-VCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KT 478
+A G+ YL VHR+L+ L+ Q I D G+ + + + V +T
Sbjct: 166 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++ PE + +FT SD+++FGV++ +I T
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 124/281 (44%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 86 NLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K
Sbjct: 145 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRK 198
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 255
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G F V+ +D LVA++++ S +S +F + LLT L+H++I+R
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVR 84
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ-----------EEGSSNVLDWSTRVSIII 419
G C+ GR +++++ G L+++L E+ + L +++
Sbjct: 85 FFG-VCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KT 478
+A G+ YL VHR+L+ L+ Q I D G+ + + + V +T
Sbjct: 143 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++ PE + +FT SD+++FGV++ +I T
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP+G++ K L + + D + I +A + Y HS V
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELANALSYCHSKRV 134
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 135 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRXXLXGTLDYLP 179
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 231
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 30/280 (10%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ-----------EEGSSNVLDWSTRVSII 418
L G C G G +I +F G LS YL E+ + L +
Sbjct: 96 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT 478
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 155 FQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRKG 208
Query: 479 SA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLK 265
Query: 537 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP+G++ K L + + D + I +A + Y HS V
Sbjct: 81 YFHDATR--VYLILEYAPRGEVYKELQK----LSKFDEQRTATYITELANALSYCHSKRV 134
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 135 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 179
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 231
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G F V+ +D LVA++++ S +S +F + LLT L+H++I+R
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVR 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ-----------EEGSSNVLDWSTRVSIII 419
G C+ GR +++++ G L+++L E+ + L +++
Sbjct: 79 FFG-VCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KT 478
+A G+ YL VHR+L+ L+ Q I D G+ + + + V +T
Sbjct: 137 QVAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++ PE + +FT SD+++FGV++ +I T
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG + V++G+ + G VA++ + S + E++ F + LY LRHENI+ GF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENIL---GFI 97
Query: 376 CS-----RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
S + +LI + G L YL LD + + I++ IA G+ +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 431 S---EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
KPAI HR+L + +L+ + IAD GL H + + Y
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 212
Query: 485 LAPEY------VTTGRFTERSDIFAFGVIILQI----LTGSLVLTSS---MRLAAESATF 531
+APE V +R DI+AFG+++ ++ ++ +V + +F
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 272
Query: 532 ENF-----IDR---NLKGK-FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577
E+ +D+ N+ + FS+ L K+ C +++P R T + + LT
Sbjct: 273 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 327
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG + V++G+ + G VA++ + S + E++ F + LY LRHENI+ GF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENIL---GFI 68
Query: 376 CS-----RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
S + +LI + G L YL LD + + I++ IA G+ +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 431 S---EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
KPAI HR+L + +L+ + IAD GL H + + Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 485 LAPEY------VTTGRFTERSDIFAFGVIILQI----LTGSLVLTSS---MRLAAESATF 531
+APE V +R DI+AFG+++ ++ ++ +V + +F
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243
Query: 532 ENF-----IDR---NLKGK-FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577
E+ +D+ N+ + FS+ L K+ C +++P R T + + LT
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 154 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRK 207
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 264
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLRGFC 375
+GKG + V++G+ + G VA++ + S + E++ F + LY LRHENI+ GF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENIL---GFI 68
Query: 376 CS-----RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
S + +LI + G L YL LD + + I++ IA G+ +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 431 S---EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGY 484
KPAI HR+L + +L+ + IAD GL H + + Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 485 LAPEY------VTTGRFTERSDIFAFGVIILQI----LTGSLVLTSS---MRLAAESATF 531
+APE V +R DI+AFG+++ ++ ++ +V + +F
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243
Query: 532 ENF-----IDR---NLKGK-FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577
E+ +D+ N+ + FS+ L K+ C +++P R T + + LT
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 86 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 145 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRK 198
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 255
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEA----EFVKGLYLLTSLRHENIIRLR 372
LG GNF +V KG + +V ++ + ++ + E + ++ L + I+R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G C + L+ + A G L+KYL Q + +V D + ++ ++ G+ YL S
Sbjct: 79 GICEAES---WMLVMEMAELGPLNKYLQQ---NRHVKD-KNIIELVHQVSMGMKYLEESN 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA--MGYLAPEYV 490
VHR+L+ VL+ Q I+D GL K L D +T + + APE +
Sbjct: 132 -----FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 491 TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA- 549
+F+ +SD+++FGV++ + + M+ + +A E KG+ A
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-------KGERMGCPAGC 239
Query: 550 --KLGKMALVCTHEDPENRPTMEAV 572
++ + +C D ENRP AV
Sbjct: 240 PREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 95 NLLGACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 154 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-XVRK 207
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 264
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 37/274 (13%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + + E E + + + + + LRH NI+R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R R +L+ +FAP+G+L K L Q+ G D + + +A + Y H +V
Sbjct: 83 YFHDRKR--IYLMLEFAPRGELYKEL-QKHGR---FDEQRSATFMEELADALHYCHERKV 136
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-------AAMGYLA 486
+HR++ E +L+ + IAD G +SV S + YL
Sbjct: 137 -----IHRDIKPENLLMGYKGELKIADFG----------WSVHAPSLRRRXMCGTLDYLP 181
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D++ GV+ + L G S + + T ++ +LK S
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS----PSHTETHRRIVNVDLKFPPFLS 237
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
+ +K L+ H P R ++ V+E V A
Sbjct: 238 DGSKDLISKLLRYH--PPQRLPLKGVMEHPWVKA 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------------EEGSSNVLDWSTRVSI 417
L G C G G +I +F G LS YL E+ + L +
Sbjct: 86 NLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D V K
Sbjct: 145 SFQVAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD-XVRK 198
Query: 478 TSA--AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
A + ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRL 255
Query: 536 DRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 37/274 (13%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + + E E + + + + + LRH NI+R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R R +L+ +FAP+G+L K L Q+ G D + + +A + Y H +V
Sbjct: 82 YFHDRKR--IYLMLEFAPRGELYKEL-QKHGR---FDEQRSATFMEELADALHYCHERKV 135
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-------AAMGYLA 486
+HR++ E +L+ + IAD G +SV S + YL
Sbjct: 136 -----IHRDIKPENLLMGYKGELKIADFG----------WSVHAPSLRRRXMCGTLDYLP 180
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D++ GV+ + L G S + + T ++ +LK S
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS----PSHTETHRRIVNVDLKFPPFLS 236
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
+ +K L+ H P R ++ V+E V A
Sbjct: 237 DGSKDLISKLLRYH--PPQRLPLKGVMEHPWVKA 268
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 48/290 (16%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG--LYLLTSLRHENIIRL 371
V +GKG + V+ G R G VA++ T EEA + + +Y +RHENI+
Sbjct: 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENIL-- 94
Query: 372 RGFCCSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
GF + +G + +LI D+ G L YL S LD + + + G+
Sbjct: 95 -GFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLC 148
Query: 427 YLHS---SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG 483
+LH+ S KPAI HR+L + +L+ + IAD GL D + + +G
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 484 ---YLAPEY----VTTGRFTE--RSDIFAFGVIILQI----LTGSLVLTSSM---RLAAE 527
Y+ PE + F +D+++FG+I+ ++ ++G +V + L
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268
Query: 528 SATFENFID----RNLKGKFSESEAA-----KLGKMALVCTHEDPENRPT 568
++E+ + + L+ F ++ ++GK+ C +P +R T
Sbjct: 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT 318
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 80 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 134 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581
+ + + C PE+RPT A+ + L A P
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 278
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 26/263 (9%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
+GKG F V G R G VA++ I + F+ ++T LRH N+++L G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+G +++ ++ KG L YL + G S VL + + + + + YL +
Sbjct: 257 EE-KGGLYIVTEYMAKGSLVDYL-RSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---- 309
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L+ VL+ + ++D GL K + L + APE + +F+
Sbjct: 310 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFS 364
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG-KFSESEAAKLGKMA 555
+SD+++FG+++ +I S R+ ++ + R KG K +
Sbjct: 365 TKSDVWSFGILLWEIY-------SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYD 417
Query: 556 LV--CTHEDPENRPTMEAVIEEL 576
++ C H D RPT + E+L
Sbjct: 418 VMKNCWHLDAATRPTFLQLREQL 440
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 21/227 (9%)
Query: 317 LGKGNFSSVYKGTLRDGT-LVAIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + +VA++ + + + E E + + + + L H NI+RL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R R +LI ++AP+G+L K L + S D +I+ +A + Y H +V
Sbjct: 91 YFYDRRR--IYLILEYAPRGELYKELQK----SCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ + IAD G + A + + + YL PE +
Sbjct: 145 -----IHRDIKPENLLLGLKGELKIADFGW-SVHAPSLRRKTM--CGTLDYLPPEMIEGR 196
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
E+ D++ GV+ ++L G+ S A+ + T+ + +LK
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFES----ASHNETYRRIVKVDLK 239
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 317 LGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG+G F V+ +D LVA++++ S + + +F + LLT+L+HE+I++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK-DFHREAELLTNLQHEHIVK 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ---------EEGSSNVLDWSTRVSIIIGI 421
G C +++++ G L+K+L E L S + I I
Sbjct: 80 FYGVCVEGD--PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSA 480
A G+ YL S VHR+L+ L+ + I D G+ + + + V T
Sbjct: 138 AAGMVYLASQH-----FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
+ ++ PE + +FT SD+++ GV++ +I T
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 76 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 129
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 130 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581
+ + + C PE+RPT A+ + L A P
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY ++ + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS +V
Sbjct: 76 YFHDSTR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKKV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRAALCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T+++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQDTYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 24/275 (8%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 86 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 139
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT--SAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L + V++ + APE
Sbjct: 140 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582
+ + + C PE+RPT A+ + L A P
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEA-EFVKGLYLLTSLRHE 366
F ++N L K N + ++KG + G + ++ + V + ++ +F + L H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ + G C S LI + P G L L EG++ V+D S V + +A+G+
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL--HEGTNFVVDQSQAVKFALDMARGMA 125
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGY 484
+LH+ E P I L+ V+ID+ I+ D+ FS A +
Sbjct: 126 FLHTLE---PLIPRHALNSRSVMIDEDMTARISMA--------DVKFSFQSPGRMYAPAW 174
Query: 485 LAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLT--SSMRLAAESATFENFIDR 537
+APE + T R + +D+++F V++ +++T + S+M + + A
Sbjct: 175 VAPEALQKKPEDTNRRS--ADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL------E 226
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVI 573
L+ + + K+ +C +EDP RP + ++
Sbjct: 227 GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIV 262
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 24/275 (8%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 86 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 139
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 140 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582
+ + + C PE+RPT A+ + L A P
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 76 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 129
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 130 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581
+ + + C PE+RPT A+ + L A P
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 35/223 (15%)
Query: 306 SATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGL-----YL 359
+ + + + L+G+G++ V K +D G +VAI+ +S++ + VK + L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF----LESDDDKMVKKIAMREIKL 77
Query: 360 LTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
L LRHEN++ L C + R +L+++F LD E N LD+ +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKR--WYLVFEFVD----HTILDDLELFPNGLDYQVVQKYLF 131
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA------DDIVF 473
I GIG+ HS I+HR++ E +L+ Q + D G + LA DD V
Sbjct: 132 QIINGIGFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV- 185
Query: 474 SVLKTSAAMGYLAPE-YVTTGRFTERSDIFAFGVIILQILTGS 515
A Y APE V ++ + D++A G ++ ++ G
Sbjct: 186 ------ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 130
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ IAD G A + L S + YL PE +
Sbjct: 131 -----IHRDIKPENLLLGSAGELKIADFGW-SCHAPSSRRTTL--SGTLDYLPPEMIEGR 182
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
E+ D+++ GV+ + L G + E+ T++ R + +F+ + G
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFVTEGA 234
Query: 554 MALVCT--HEDPENRPTMEAVIEELTVAA 580
L+ +P RP + V+E + A
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 132 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE----- 547
RFT SD++ FGV + +IL + F+ + ++ G+ E
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGV------------KPFQGVKNNDVIGRIENGERLPMP 234
Query: 548 ---AAKLGKMALVCTHEDPENRPTMEAVIEELT 577
L + C DP RP + +L+
Sbjct: 235 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 106 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 159
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 160 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE----- 547
RFT SD++ FGV + +IL + F+ + ++ G+ E
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGV------------KPFQGVKNNDVIGRIENGERLPMP 262
Query: 548 ---AAKLGKMALVCTHEDPENRPTMEAVIEELT 577
L + C DP RP + +L+
Sbjct: 263 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 295
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 155
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCG--LHKLLA--DDIVFSVLKTSAAMGYLAPEY 489
+HR++ E +L+ IAD G +H + DD+ + YL PE
Sbjct: 156 -----IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-------GTLDYLPPEM 203
Query: 490 VTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 549
+ E+ D+++ GV+ + L G + E+ T++ R + +F+ +
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 550 KLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
G L+ +P RP + V+E + A
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 83 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 136
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 137 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE----- 547
RFT SD++ FGV + +IL + F+ + ++ G+ E
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGV------------KPFQGVKNNDVIGRIENGERLPMP 239
Query: 548 ---AAKLGKMALVCTHEDPENRPTMEAVIEELT 577
L + C DP RP + +L+
Sbjct: 240 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 132 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE----- 547
RFT SD++ FGV + +IL + F+ + ++ G+ E
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGV------------KPFQGVKNNDVIGRIENGERLPMP 234
Query: 548 ---AAKLGKMALVCTHEDPENRPTMEAVIEELT 577
L + C DP RP + +L+
Sbjct: 235 PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 102 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 155
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ IAD G + A + L + YL PE +
Sbjct: 156 -----IHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTL--CGTLDYLPPEMIEGR 207
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
E+ D+++ GV+ + L G + E+ T++ R + +F+ + G
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFVTEGA 259
Query: 554 MALVCT--HEDPENRPTMEAVIEELTVAA 580
L+ +P RP + V+E + A
Sbjct: 260 RDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 306 SATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR 364
S++ F ++ LG G +++VYKG + G VA++ + + S + + ++ + L+ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEE--GSSNVLDWSTRVSIIIGIA 422
HENI+RL + + L+++F L KY+D + L+ + +
Sbjct: 62 HENIVRLYDVIHTENK--LTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI-VFSVLKTSAA 481
+G+ + H ++ I+HR+L + +LI+++ + D GL + + FS
Sbjct: 119 QGLAFCHENK-----ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVVT 171
Query: 482 MGYLAPEYVTTGR-FTERSDIFAFGVIILQILTG 514
+ Y AP+ + R ++ DI++ G I+ +++TG
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 458 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 511
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 512 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 80 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 133
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 134 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 81 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 134
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 135 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 75 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 128
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 129 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 134
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ IAD G + A + L + YL PE +
Sbjct: 135 -----IHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTL--CGTLDYLPPEXIEGR 186
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
E+ D+++ GV+ + L G + E+ T++ R + +F+ + G
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFVTEGA 238
Query: 554 MALVCT--HEDPENRPTMEAVIEELTVAA 580
L+ +P RP + V+E + A
Sbjct: 239 RDLISRLLKHNPSQRPXLREVLEHPWITA 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 134
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 135 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTDLCGTLDYLP 179
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 231
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCG--LHKLLA--DDIVFSVLKTSAAMGYLAPEY 489
+HR++ E +L+ IAD G +H + DD+ + YL PE
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-------GTLDYLPPEM 180
Query: 490 VTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 549
+ E+ D+++ GV+ + L G + E+ T++ R + +F+ +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 550 KLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
G L+ +P RP + V+E + A
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 40/223 (17%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
+ + +G F V+K L + VA++ + +S ++E + ++ ++HEN+++
Sbjct: 20 LEIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQ--- 73
Query: 374 FCCSRGRG-----ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
F + RG E +LI F KG L+ YL N++ W+ + +++G+ YL
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYL 128
Query: 429 HSS------EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK----T 478
H E +KP+I HR+ + VL+ ++AD GL + F K T
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL------AVRFEPGKPPGDT 182
Query: 479 SAAMG---YLAPEYVTTGRFTERS-----DIFAFGVIILQILT 513
+G Y+APE + +R D++A G+++ ++++
Sbjct: 183 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTELCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 132 -----FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 80 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 133
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 134 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 178
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 230
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 231 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTDLCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 458 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 511
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D + K + ++APE +
Sbjct: 512 -----FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 28/264 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
+GKG F V G R G VA++ I + F+ ++T LRH N+++L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+G +++ ++ KG L YL + G S VL + + + + + YL +
Sbjct: 70 EE-KGGLYIVTEYMAKGSLVDYL-RSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---- 122
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-AMGYLAPEYVTTGRF 495
VHR+L+ VL+ + ++D GL K + S T + + APE + +F
Sbjct: 123 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALREKKF 176
Query: 496 TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG-KFSESEAAKLGKM 554
+ +SD+++FG+++ +I S R+ ++ + R KG K +
Sbjct: 177 STKSDVWSFGILLWEIY-------SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY 229
Query: 555 ALV--CTHEDPENRPTMEAVIEEL 576
++ C H D RP+ + E+L
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQL 253
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 131
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 132 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRXXLCGTLDYLP 176
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 228
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 229 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 177
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 229
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 27/269 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ IAD G ++ T + YL PE +
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGT---LDYLPPEMIEGR 184
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
E+ D+++ GV+ + L G + E+ T++ R + +F+ + G
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 554 MALVCT--HEDPENRPTMEAVIEELTVAA 580
L+ +P RP + V+E + A
Sbjct: 237 RDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 26/263 (9%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
+GKG F V G R G VA++ I + F+ ++T LRH N+++L G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+G +++ ++ KG L YL + G S VL + + + + + YL +
Sbjct: 85 EE-KGGLYIVTEYMAKGSLVDYL-RSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---- 137
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L+ VL+ + ++D GL K + L + APE + +F+
Sbjct: 138 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFS 192
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG-KFSESEAAKLGKMA 555
+SD+++FG+++ +I S R+ ++ + R KG K +
Sbjct: 193 TKSDVWSFGILLWEIY-------SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYE 245
Query: 556 LV--CTHEDPENRPTMEAVIEEL 576
++ C H D RP+ + E+L
Sbjct: 246 VMKNCWHLDAAMRPSFLQLREQL 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 130
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 131 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRDTLCGTLDYLP 175
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 227
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 77 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 130
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 131 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTDLCGTLDYLP 175
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 227
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRXXLCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTDLCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 81 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 134
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 135 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 179
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 231
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 232 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTXLCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 93 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 146
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 147 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 191
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 243
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 244 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 75 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 128
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 129 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 173
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 225
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 226 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
+GKG F V G R G VA++ I + F+ ++T LRH N+++L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+G +++ ++ KG L YL + G S VL + + + + + YL +
Sbjct: 76 EE-KGGLYIVTEYMAKGSLVDYL-RSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---- 128
Query: 437 AIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT 496
VHR+L+ VL+ + ++D GL K + L + APE + F+
Sbjct: 129 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREAAFS 183
Query: 497 ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG-KFSESEAAKLGKMA 555
+SD+++FG+++ +I S R+ ++ + R KG K +
Sbjct: 184 TKSDVWSFGILLWEIY-------SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYE 236
Query: 556 LV--CTHEDPENRPTMEAVIEEL 576
++ C H D RP+ + E+L
Sbjct: 237 VMKNCWHLDAAMRPSFLQLREQL 259
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 304 VESATQCFSEVNL-----LGKGNFSSVYKGTL-----RDG-TLVAIRSINVTSCKSEEAE 352
+E F NL LG+G F V K T R G T VA++ + + SE +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 353 FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ----------- 401
+ +L + H ++I+L G C G LI ++A G L +L +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 402 ---------EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
+ L +S I++G+ YL ++VHR+L+ +L+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-----SLVHRDLAARNILVAE 185
Query: 453 QFNPLIADCGLHK-LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 511
I+D GL + + +D + + ++A E + +T +SD+++FGV++ +I
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 512 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEA 571
+T L + N + + + ++ + ++ ++ L C ++P+ RP
Sbjct: 246 VT----LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 572 VIEEL 576
+ ++L
Sbjct: 302 ISKDL 306
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 76 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 129
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 130 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRAALCGTLDYLP 174
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 226
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 227 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 304 VESATQCFSEVNL-----LGKGNFSSVYKGTL-----RDG-TLVAIRSINVTSCKSEEAE 352
+E F NL LG+G F V K T R G T VA++ + + SE +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 353 FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ----------- 401
+ +L + H ++I+L G C G LI ++A G L +L +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 402 ---------EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
+ L +S I++G+ YL + +VHR+L+ +L+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-----LVHRDLAARNILVAE 185
Query: 453 QFNPLIADCGLHK-LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 511
I+D GL + + +D + + ++A E + +T +SD+++FGV++ +I
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 512 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEA 571
+T L + N + + + ++ + ++ ++ L C ++P+ RP
Sbjct: 246 VT----LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 572 VIEEL 576
+ ++L
Sbjct: 302 ISKDL 306
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 304 VESATQCFSEVNL-----LGKGNFSSVYKGTL-----RDG-TLVAIRSINVTSCKSEEAE 352
+E F NL LG+G F V K T R G T VA++ + + SE +
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 353 FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ----------- 401
+ +L + H ++I+L G C G LI ++A G L +L +
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQ--DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 402 ---------EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
+ L +S I++G+ YL + +VHR+L+ +L+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-----LVHRDLAARNILVAE 185
Query: 453 QFNPLIADCGLHK-LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI 511
I+D GL + + +D + + ++A E + +T +SD+++FGV++ +I
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 512 LTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEA 571
+T L + N + + + ++ + ++ ++ L C ++P+ RP
Sbjct: 246 VT----LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 572 VIEEL 576
+ ++L
Sbjct: 302 ISKDL 306
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 177
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 229
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRXXLCGTLDYLP 177
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 229
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 73 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 126
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 127 -----IHRDIKPENLLLGSAGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 171
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 223
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 224 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 76 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 129
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 130 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 548 AAKLGKMALVCTHEDPENRPTMEAV 572
+ + + C PE+RPT A+
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY R + A++ + T + E + + + + + LRH NI+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 80 YFHDATR--VYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSYCHSKRV 133
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 134 -----IHRDIKPENLLLGSNGELKIADFG----------WSVHAPSSRRDTLCGTLDYLP 178
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG------SLVLTSSMRLAAESATFENFID---R 537
PE + E+ D+++ GV+ + L G + R++ TF +F+ R
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGAR 238
Query: 538 NLKGKFSESEAAKLGKMALVCTH 560
+L + + A++ +A V H
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEH 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 24/265 (9%)
Query: 317 LGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIR 370
LG G+F V +G + VA++ + EA +F++ + + SL H N+IR
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L G + ++ + AP G L L + +G + T + +A+G+GYL S
Sbjct: 80 LYGVVLT---PPMKMVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLES 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA--DDIVFSVLKTSAAMGYLAPE 488
+HR+L+ +L+ + I D GL + L DD + APE
Sbjct: 134 KR-----FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSESE 547
+ T F+ SD + FGV + ++ T + + + ID+ + E
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMFT----YGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 548 AAKLGKMALVCTHEDPENRPTMEAV 572
+ + + C PE+RPT A+
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 317 LGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G+G F V++G VAI++ + S +F++ + H +I++L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
G ++I + G+L +L + S LD ++ + ++ + YL S
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 131
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VHR+++ VL+ + D GL + + D K + ++APE +
Sbjct: 132 -----FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINF 186
Query: 493 GRFTERSDIFAFGVIILQIL 512
RFT SD++ FGV + +IL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY R + A++ + T + E + + + + + LRH NI+RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 80 YFHDATR--VYLILEYAPLGTVYRELQK----LSRFDEQRTATYITELANALSYCHSKRV 133
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IAD G +SV S+ + YL
Sbjct: 134 -----IHRDIKPENLLLGSNGELKIADFG----------WSVHAPSSRRTTLCGTLDYLP 178
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG------SLVLTSSMRLAAESATFENFID---R 537
PE + E+ D+++ GV+ + L G + R++ TF +F+ R
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGAR 238
Query: 538 NLKGKFSESEAAKLGKMALVCTH 560
+L + + A++ +A V H
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEH 261
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 27/268 (10%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIRLRG 373
+G+G FS VY+ L DG VA++ + + +A + +K + LL L H N+I+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY-- 97
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ E ++ + A G LS+ + + ++ T + + + ++HS V
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV 157
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG------YLAP 487
+HR++ V I + D GL + + KT+AA Y++P
Sbjct: 158 -----MHRDIKPANVFITATGVVKLGDLGLGRFFSS-------KTTAAHSLVGTPYYMSP 205
Query: 488 EYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
E + + +SDI++ G ++ ++ S M L + E L S+
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLP---SDH 262
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIE 574
+ +L ++ +C + DPE RP + V +
Sbjct: 263 YSEELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 38/282 (13%)
Query: 314 VNLLGKGNFSSVYKG------TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
V +G+G F V++ T+VA++ + + +A+F + L+ + N
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG------SSNVLDWSTRVS----- 416
I++L G C + G+ C L++++ G L+++L S + L RVS
Sbjct: 112 IVKLLGVC-AVGKPMC-LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 417 ---------IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK-L 466
I +A G+ YL + VHR+L+ L+ + IAD GL + +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA 526
+ D + + + ++ PE + R+T SD++A+GV++ +I + L M A
Sbjct: 225 YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM---A 281
Query: 527 ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPT 568
D N+ E+ +L + +C + P +RP+
Sbjct: 282 HEEVIYYVRDGNILA-CPENCPLELYNLMRLCWSKLPADRPS 322
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L S + + I A+G+ YLH+
Sbjct: 78 T---KPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAK---- 127
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 128 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 184
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
+ ++ +SD++AFG+++ +++TG L
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQL 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 79 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 132
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA-------AMGYLA 486
+HR++ E +L+ IA+ G +SV S+ + YL
Sbjct: 133 -----IHRDIKPENLLLGSAGELKIANFG----------WSVHAPSSRRTTLCGTLDYLP 177
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546
PE + E+ D+++ GV+ + L G + E+ T++ R + +F+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFP 229
Query: 547 EAAKLGKMALVCT--HEDPENRPTMEAVIEELTVAA 580
+ G L+ +P RP + V+E + A
Sbjct: 230 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 315 NLLGKGNFSSVYKGTL----RDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHEN 367
+LG G F V T + G VA++ + + SE + L ++T L HEN
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLD-------------------QEEGSSNV 408
I+ L G C G +LI+++ G L YL +EE NV
Sbjct: 111 IVNLLGACTLSG--PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 409 LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 468
L + + +AKG+ +L + VHR+L+ VL+ I D GL + +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFK-----SCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 469 DDIVFSVLKTSA-AMGYLAPEYVTTGRFTERSDIFAFGVIILQILT 513
D + V + + ++APE + G +T +SD++++G+++ +I +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L S + + I A+G+ YLH+
Sbjct: 90 T---KPQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAK---- 139
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + F L S ++ ++APE +
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRM 196
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
+ ++ +SD++AFG+++ +++TG L
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 27/269 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLV-AIRSINVTSCKSE--EAEFVKGLYLLTSLRHENIIRLRG 373
LGKG F +VY + + A++ + + E + + + + + LRH NI+RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ R +LI ++AP G + + L + + D + I +A + Y HS V
Sbjct: 78 YFHDATR--VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRV 131
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG 493
+HR++ E +L+ IA+ G + A + L + YL PE +
Sbjct: 132 -----IHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRRTTL--CGTLDYLPPEMIEGR 183
Query: 494 RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGK 553
E+ D+++ GV+ + L G + E+ T++ R + +F+ + G
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVG--------KPPFEANTYQETYKRISRVEFTFPDFVTEGA 235
Query: 554 MALVCT--HEDPENRPTMEAVIEELTVAA 580
L+ +P RP + V+E + A
Sbjct: 236 RDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 120/282 (42%), Gaps = 30/282 (10%)
Query: 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSL 363
S + + + +G G++ K + DG ++ + ++ S ++E+ V + LL L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK 423
+H NI+R R +++ ++ G L+ + + LD + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG 483
+ H ++HR+L V +D + N + D GL ++L D F+ A +G
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA----KAFVG 178
Query: 484 ---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
Y++PE + + E+SDI++ G ++ + L A F F + L
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE-------------LCALMPPFTAFSQKELA 225
Query: 541 GKFSESE--------AAKLGKMALVCTHEDPENRPTMEAVIE 574
GK E + + +L ++ + +RP++E ++E
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 119/280 (42%), Gaps = 26/280 (9%)
Query: 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSL 363
S + + + +G G++ K + DG ++ + ++ S ++E+ V + LL L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK 423
+H NI+R R +++ ++ G L+ + + LD + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG 483
+ H ++HR+L V +D + N + D GL ++L D F+ KT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KTFVGTP 180
Query: 484 -YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542
Y++PE + + E+SDI++ G ++ + L A F F + L GK
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYE-------------LCALMPPFTAFSQKELAGK 227
Query: 543 FSESE--------AAKLGKMALVCTHEDPENRPTMEAVIE 574
E + + +L ++ + +RP++E ++E
Sbjct: 228 IREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L S + + I A+G+ YLH+
Sbjct: 90 TA---PQLAIVTQWCEGSSLYHHL---HASETKFEMKKLIDIARQTARGMDYLHAK---- 139
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + F L S ++ ++APE +
Sbjct: 140 -SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRM 196
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
+ ++ +SD++AFG+++ +++TG L
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 30/222 (13%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKG-LYLLTSLRHENIIRLR 372
V +GKG + V++G L G VA++ + S + E++ F + +Y LRH+NI+
Sbjct: 13 VECVGKGRYGEVWRG-LWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNIL--- 65
Query: 373 GFCCS-----RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
GF S + +LI + G L +L ++ L+ + + + A G+ +
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQ-----TLEPHLALRLAVSAACGLAH 120
Query: 428 LHSS---EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG- 483
LH KPAI HR+ VL+ IAD GL + + + + + +G
Sbjct: 121 LHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 484 --YLAPEYVTTGRFTE------RSDIFAFGVIILQILTGSLV 517
Y+APE + T+ +DI+AFG+++ +I ++V
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIV 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK 347
+RE+ S ++ E + F LG G FS V + G L A++ I + K
Sbjct: 2 MARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALK 61
Query: 348 SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ--EEGS 405
+E+ + +L ++HENI+ L S +L+ G+L D+ E+G
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNH--LYLVMQLVSGGEL---FDRIVEKGF 116
Query: 406 SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCG 462
D ST +I + + YLH + IVHR+L E +L D++ +I+D G
Sbjct: 117 YTEKDAST---LIRQVLDAVYYLH-----RMGIVHRDLKPENLLYYSQDEESKIMISDFG 168
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
L K+ V S GY+APE + +++ D ++ GVI +L G
Sbjct: 169 LSKMEGKGDVMST--ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 74 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 123
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 180
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 56/286 (19%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYL--------DQEEGSS----NVLDWSTRVSI 417
L G C+ G G +I ++ G L +L D+E+G ++L +S++V
Sbjct: 106 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV-- 161
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
A+G+ +L S +HR+++ VL+ I D GL + + +D + ++K
Sbjct: 162 ----AQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVK 211
Query: 478 TSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILT-------GSLVLTSSMRLAAES 528
+A + ++APE + +T +SD++++G+++ +I + G LV + +L +
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 271
Query: 529 ATFEN--FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
F +N+ +S +A C +P +RPT + +
Sbjct: 272 YQMAQPAFAPKNI---YSIMQA---------CWALEPTHRPTFQQI 305
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 67/298 (22%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 370 RLRG-------------FCCS-------RGRGECFLIYDFAPKGKLSKYLDQEEGSS--- 406
L G +CC R + E L AP G+ + LD+E+G
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP-GQDPEGLDKEDGRPLEL 157
Query: 407 -NVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465
++L +S++V A+G+ +L S +HR+++ VL+ I D GL +
Sbjct: 158 RDLLHFSSQV------AQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 466 LLADDIVFSVLKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILT-------GSL 516
+ +D + ++K +A + ++APE + +T +SD++++G+++ +I + G L
Sbjct: 207 DIMNDSNY-IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 265
Query: 517 VLTSSMRLAAESATFEN--FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
V + +L + F +N+ +S +A C +P +RPT + +
Sbjct: 266 VNSKFYKLVKDGYQMAQPAFAPKNI---YSIMQA---------CWALEPTHRPTFQQI 311
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 79 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 128
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 185
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 79 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 128
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 129 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 185
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 76 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 125
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 126 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 182
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQL 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 74 TA---PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 123
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 180
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 101 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 150
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 151 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 207
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMTGQL 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 74 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 123
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + F L S ++ ++APE +
Sbjct: 124 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRM 180
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 134/286 (46%), Gaps = 56/286 (19%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYL--------DQEEGSS----NVLDWSTRVSI 417
L G C+ G G +I ++ G L +L D+E+G ++L +S++V
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV-- 169
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
A+G+ +L S +HR+++ VL+ I D GL + + +D + ++K
Sbjct: 170 ----AQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVK 219
Query: 478 TSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILT-------GSLVLTSSMRLAAES 528
+A + ++APE + +T +SD++++G+++ +I + G LV + +L +
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 279
Query: 529 ATFEN--FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
F +N+ +S +A C +P +RPT + +
Sbjct: 280 YQMAQPAFAPKNI---YSIMQA---------CWALEPTHRPTFQQI 313
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 102 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 151
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKL---LADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + + F L S ++ ++APE +
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRM 208
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 315 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEA--EFVKGLYLLTSLRHENIIRL 371
+ LG G F V G G VA++ +N +S + + + + L RH +II+L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+ + F++ ++ G+L Y+ + LD + I G+ Y H
Sbjct: 82 YQVISTPS--DIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCH-- 133
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGYLAPEYV 490
+ +VHR+L E VL+D N IAD GL +++D L+ S + Y APE V
Sbjct: 134 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRXSCGSPNYAAPE-V 186
Query: 491 TTGRFT--ERSDIFAFGVIILQILTGSL 516
+GR DI++ GVI+ +L G+L
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTL 214
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEA-EFVKGLYLLTSLRHE 366
F ++N L K N + ++KG + G + ++ + V + ++ +F + L H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
N++ + G C S LI + P G L L EG++ V+D S V + A+G
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL--HEGTNFVVDQSQAVKFALDXARGXA 125
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA--AMGY 484
+LH+ E P I L+ V ID+ I+ D+ FS A +
Sbjct: 126 FLHTLE---PLIPRHALNSRSVXIDEDXTARISXA--------DVKFSFQSPGRXYAPAW 174
Query: 485 LAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLT--SSMRLAAESATFENFIDR 537
+APE + T R + +D ++F V++ +++T + S+ + + A
Sbjct: 175 VAPEALQKKPEDTNRRS--ADXWSFAVLLWELVTREVPFADLSNXEIGXKVAL------E 226
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVI 573
L+ + + K+ +C +EDP RP + ++
Sbjct: 227 GLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIV 262
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 94 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 143
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + F L S ++ ++APE +
Sbjct: 144 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRM 200
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQL 227
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSIN---VTSCKSEEAEFVKGLYLLTSLR 364
Q F + LG G+F V+ R +G A++ + V K E + L +L+ +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-MLSIVT 64
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H IIR+ G + + F+I D+ G+L L + + N + + + +
Sbjct: 65 HPFIIRMWG--TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE-- 120
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
YLHS + I++R+L E +L+D+ + I D G K + D + + + T Y
Sbjct: 121 --YLHSKD-----IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-VTYXLCGTP---DY 169
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTG------SLVLTSSMRLAAESATFENFIDRN 538
+APE V+T + + D ++FG++I ++L G S + + ++ F F + +
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 229
Query: 539 LKGKFSESEAAKLGKMA--LVCTHEDPENRPTMEAVIEE 575
+K S L + L ED +N P + V+ E
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE 268
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 118/279 (42%), Gaps = 24/279 (8%)
Query: 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSL 363
S + + + +G G++ K + DG ++ + ++ S ++E+ V + LL L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK 423
+H NI+R R +++ ++ G L+ + + LD + ++ +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 424 GIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG 483
+ H ++HR+L V +D + N + D GL ++L D F+ +
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK-EFVGTPY 181
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
Y++PE + + E+SDI++ G ++ + L A F F + L GK
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYE-------------LCALMPPFTAFSQKELAGKI 228
Query: 544 SESE--------AAKLGKMALVCTHEDPENRPTMEAVIE 574
E + + +L ++ + +RP++E ++E
Sbjct: 229 REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFC 375
+G G+F +VYKG VA++ +NVT+ ++ + F + +L RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ + ++ + L +L E ++ + I A+G+ YLH+
Sbjct: 102 T---KPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAK---- 151
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGL---HKLLADDIVFSVLKTSAAMGYLAPEYVT- 491
+I+HR+L + + + I D GL + F L S ++ ++APE +
Sbjct: 152 -SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRM 208
Query: 492 --TGRFTERSDIFAFGVIILQILTGSL 516
++ +SD++AFG+++ +++TG L
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMTGQL 235
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVY-KGTLRDGTLVAIRSINVTSCKSEEA--EFVKGLYLLT 361
+ + FS++ +G G+F +VY +R+ +VAI+ ++ + +S E + +K + L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
LRH N I+ RG C +L+ ++ L D E L ++ G
Sbjct: 110 KLRHPNTIQYRG--CYLREHTAWLVMEYC----LGSASDLLEVHKKPLQEVEIAAVTHGA 163
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
+G+ YLHS ++HR++ +L+ + + D G ++A F
Sbjct: 164 LQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGT 213
Query: 482 MGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
++APE + G++ + D+++ G+ +++ L + ++A +N
Sbjct: 214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 273
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +SE C + P++RPT E +++
Sbjct: 274 QSGHWSEY----FRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 26/276 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVY-KGTLRDGTLVAIRSINVTSCKSEEA--EFVKGLYLLT 361
+ + FS++ +G G+F +VY +R+ +VAI+ ++ + +S E + +K + L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
LRH N I+ RG C +L+ ++ L D E L ++ G
Sbjct: 71 KLRHPNTIQYRG--CYLREHTAWLVMEYC----LGSASDLLEVHKKPLQEVEIAAVTHGA 124
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
+G+ YLHS ++HR++ +L+ + + D G ++A F
Sbjct: 125 LQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF-----VGT 174
Query: 482 MGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
++APE + G++ + D+++ G+ +++ L + ++A +N
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 234
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +SE C + P++RPT E +++
Sbjct: 235 QSGHWSEY----FRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 130/291 (44%), Gaps = 34/291 (11%)
Query: 288 GFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC 346
GF+ +H R++ EE+ F++++ +GKG+F VYKG +VAI+ I++
Sbjct: 7 GFANQHS---RVDPEEL------FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEA 57
Query: 347 KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS 406
+ E + + + +L+ I R G + ++I ++ G L
Sbjct: 58 EDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTK--LWIIMEYLGGGSALDLL-----KP 110
Query: 407 NVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466
L+ + +I+ I KG+ YLHS +HR++ VL+ +Q + +AD G+
Sbjct: 111 GPLEETYIATILREILKGLDYLHSERK-----IHRDIKAANVLLSEQGDVKLADFGVAGQ 165
Query: 467 LADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
L D + +K + +G ++APE + + ++DI++ G+ +++ G +
Sbjct: 166 LTD----TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE---PPNSD 218
Query: 524 LAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
L F I +N + + C ++DP RPT + +++
Sbjct: 219 LHPMRVLF--LIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
++ E + ++LG G FS V R LVAI+ I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 361 TSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG 420
++H NI+ L S G +LI G+L + E+G D S +I
Sbjct: 71 HKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERDAS---RLIFQ 124
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVL---IDQQFNPLIADCGLHKLLADDIVFSVLK 477
+ + YLH IVHR+L E +L +D+ +I+D GL K+ + SVL
Sbjct: 125 VLDAVKYLHDL-----GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLS 176
Query: 478 TSAAM-GYLAPEYVTTGRFTERSDIFAFGVIILQILTG--SLVLTSSMRLAAESATFENF 534
T+ GY+APE + +++ D ++ GVI +L G + +L + E
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
D S+S + + +DPE R T E ++ +A
Sbjct: 237 FDSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQHPWIA 277
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSV-YKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
++ E + ++LG G FS V R LVAI+ I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 361 TSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG 420
++H NI+ L S G +LI G+L + E+G D S +I
Sbjct: 71 HKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERDAS---RLIFQ 124
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVL---IDQQFNPLIADCGLHKLLADDIVFSVLK 477
+ + YLH IVHR+L E +L +D+ +I+D GL K+ + SVL
Sbjct: 125 VLDAVKYLHDL-----GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLS 176
Query: 478 TSAAM-GYLAPEYVTTGRFTERSDIFAFGVIILQILTG--SLVLTSSMRLAAESATFENF 534
T+ GY+APE + +++ D ++ GVI +L G + +L + E
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
D S+S + + +DPE R T E ++ +A
Sbjct: 237 FDSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQHPWIA 277
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 311 FSEVNLLGKGNFSSVY---KGTLRD-GTLVAIRSINVTSCKSEEAEFVK-GLYLLTSLRH 365
F + +LG+G+F V+ K T D G L A++ + + K + K +L + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKG 424
+++L + G+ +LI DF G L L +E V+ V + +A G
Sbjct: 90 PFVVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALG 142
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ +LHS I++R+L E +L+D++ + + D GL K A D + Y
Sbjct: 143 LDHLHSL-----GIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSFCGTVEY 196
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
+APE V + +D +++GV++ ++LTGSL R
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDR 235
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 29/285 (10%)
Query: 314 VNLLGKGNFSSV-YKGTLRDGTLVAIRSINVTSCKS-EEAEFVKGLYLLTSLRHENIIRL 371
+ LG+G FS V L DG A++ I + EEA+ ++ L H NI+RL
Sbjct: 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRL 91
Query: 372 RGFCCSRGRG---ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
+C R RG E +L+ F +G L +++ + N L + +++GI +G+ +
Sbjct: 92 VAYCL-RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS----VLKTSAA--- 481
H+ HR+L +L+ + P++ D G + S L+ AA
Sbjct: 151 HAK-----GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 482 -MGYLAPEYVTTGR---FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA-TFENFID 536
+ Y APE + ER+D+++ G ++ ++ G + A +N +
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 537 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581
+ S + L M V DP RP + ++ +L P
Sbjct: 266 IPQSPRHSSALWQLLNSMMTV----DPHQRPHIPLLLSQLEALQP 306
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
++ E + ++LG G FS V R LVAI+ I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 361 TSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG 420
++H NI+ L S G +LI G+L + E+G D S +I
Sbjct: 71 HKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERDAS---RLIFQ 124
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVL---IDQQFNPLIADCGLHKLLADDIVFSVLK 477
+ + YLH IVHR+L E +L +D+ +I+D GL K+ + SVL
Sbjct: 125 VLDAVKYLHDL-----GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLS 176
Query: 478 TSAAM-GYLAPEYVTTGRFTERSDIFAFGVIILQILTG--SLVLTSSMRLAAESATFENF 534
T+ GY+APE + +++ D ++ GVI +L G + +L + E
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
D S+S + + +DPE R T E ++ +A
Sbjct: 237 FDSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQHPWIA 277
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 317 LGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
LG+G F+ ++KG R+ T V ++ ++ E+ F + +++ L H+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-FFEAASMMSKLSHKHL 74
Query: 369 IRLRGFC-CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ G C C E L+ +F G L YL + + N+L W V+ + A
Sbjct: 75 VLNYGVCFCG---DENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAWA----- 125
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS---AAMGY 484
+H E N ++H N+ + +L+ ++ + + KL I +VL + +
Sbjct: 126 MHFLEEN--TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 485 LAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
+ PE + + +D ++FG + +I +G S++ + +E+ + +
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQL 237
Query: 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+AA+L + C +P++RP+ A+I +L
Sbjct: 238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 302 EEVESATQCFSEVNLLGKGNFSSV-YKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLL 360
++ E + ++LG G FS V R LVAI+ I + + +E + +L
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 361 TSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG 420
++H NI+ L S G +LI G+L + E+G D S +I
Sbjct: 71 HKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERDAS---RLIFQ 124
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVL---IDQQFNPLIADCGLHKLLADDIVFSVLK 477
+ + YLH IVHR+L E +L +D+ +I+D GL K+ + SVL
Sbjct: 125 VLDAVKYLHDL-----GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLS 176
Query: 478 TSAAM-GYLAPEYVTTGRFTERSDIFAFGVIILQILTG--SLVLTSSMRLAAESATFENF 534
T+ GY+APE + +++ D ++ GVI +L G + +L + E
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579
D S+S + + +DPE R T E ++ +A
Sbjct: 237 FDSPYWDDISDSAKDFIRHL----MEKDPEKRFTCEQALQHPWIA 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 314 VNLLGKGNFSSVYKGTLRDGTL----VAIRSINVTSCKSEEA--EFVKGLYLLTSLRHEN 367
V+ LG G S+VY L + T+ VAI++I + + EE F + ++ + L H+N
Sbjct: 16 VDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 368 IIRLRGFCCSRGRGECF-LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
I+ + +C+ L+ ++ LS+Y++ S L T ++ I GI
Sbjct: 73 IVSM---IDVDEEDDCYYLVMEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIK 125
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG--- 483
+ H IVHR++ + +LID I D G+ K L++ S+ +T+ +G
Sbjct: 126 HAHDMR-----IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE---TSLTQTNHVLGTVQ 177
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y +PE E +DI++ G+++ ++L G
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 317 LGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI 368
LG+G F+ ++KG R+ T V ++ ++ E+ F + +++ L H+++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-FFEAASMMSKLSHKHL 74
Query: 369 IRLRGFC-CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ G C C E L+ +F G L YL + + N+L W V+ + A
Sbjct: 75 VLNYGVCVCG---DENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAAA----- 125
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS---AAMGY 484
+H E N ++H N+ + +L+ ++ + + KL I +VL + +
Sbjct: 126 MHFLEEN--TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 485 LAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
+ PE + + +D ++FG + +I +G S++ + +E+ + +
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQL 237
Query: 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+AA+L + C +P++RP+ A+I +L
Sbjct: 238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 130/282 (46%), Gaps = 44/282 (15%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L G C+ G G +I ++ G L +L ++ S VL+ +I A LH
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRK---SRVLETDPAFAIANSTASTRDLLH 168
Query: 430 -SSEVNK-------PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
SS+V + +HR+++ VL+ I D GL + + +D + ++K +A
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGNAR 227
Query: 482 M--GYLAPEYVTTGRFTERSDIFAFGVIILQILT-------GSLVLTSSMRLAAESATFE 532
+ ++APE + +T +SD++++G+++ +I + G LV + +L +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 287
Query: 533 N--FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
F +N+ +S +A C +P +RPT + +
Sbjct: 288 QPAFAPKNI---YSIMQA---------CWALEPTHRPTFQQI 317
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 312 SEVNL---LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHEN 367
SEV L +G G+F +VYKG VA++ + V E+ + F + +L RH N
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+ G+ + ++ + L K+L +E + + I A+G+ Y
Sbjct: 94 ILLFMGYMT---KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---LIDIARQTAQGMDY 147
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD-DIVFSVLKTSAAMGYLA 486
LH+ I+HR++ + + + I D GL + + V + + ++ ++A
Sbjct: 148 LHAKN-----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 487 PEYVT---TGRFTERSDIFAFGVIILQILTGSL 516
PE + F+ +SD++++G+++ +++TG L
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ + +++ LG+G +++VYKG + LVA++ I + + ++ + LL L+H N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+ L + L++++ K L +YLD N+++ + + +G+ Y
Sbjct: 62 IVTLHDIIHT--EKSLTLVFEYLDKD-LKQYLDD---CGNIINMHNVKLFLFQLLRGLAY 115
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAP 487
H +V +HR+L + +LI+++ +AD GL + A I + P
Sbjct: 116 CHRQKV-----LHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRP 168
Query: 488 EYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSS 521
+ G ++ + D++ G I ++ TG + S
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F+++ +GKG+F V+KG R +VAI+ I++ + E + + + +L+
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ + G + ++I ++ G L+ LD + +I+ I KG+ Y
Sbjct: 87 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDY 139
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LHS + +HR++ VL+ + +AD G+ L D + +K + +G +
Sbjct: 140 LHSEKK-----IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNTFVGTPFW 190
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN----LK 540
+APE + + ++DI++ G+ +++ G L F I +N L+
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGE---PPHSELHPMKVLF--LIPKNNPPTLE 245
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +S+ L + C +++P RPT + +++
Sbjct: 246 GNYSKP----LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA+R I+ T S + + + ++ L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKT-SAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + L T + Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIMKD 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA+R I+ T S + + + ++ L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF--SVLKTSAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + + + Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIMKD 264
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D + VA++ + ++ +E + L +L+ L H NI+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV-------------- 415
L G C+ G G +I ++ G L +L ++ S S +
Sbjct: 114 NLLG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
S +AKG+ +L S +HR+L+ +L+ I D GL + + +D + V
Sbjct: 172 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNY-V 225
Query: 476 LKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533
+K +A + ++APE + +T SD++++G+ + ++ + M + + F
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYK 282
Query: 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + E A++ + C DP RPT + +++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F+++ +GKG+F V+KG R +VAI+ I++ + E + + + +L+
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ + G + ++I ++ G L+ LD + +I+ I KG+ Y
Sbjct: 82 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDY 134
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LHS + +HR++ VL+ + +AD G+ L D + +K + +G +
Sbjct: 135 LHSEKK-----IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNXFVGTPFW 185
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN----LK 540
+APE + + ++DI++ G+ +++ G L F I +N L+
Sbjct: 186 MAPEVIKQSAYDSKADIWSLGITAIELARGE---PPHSELHPMKVLF--LIPKNNPPTLE 240
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +S+ L + C +++P RPT + +++
Sbjct: 241 GNYSKP----LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D + VA++ + ++ +E + L +L+ L H NI+
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV-------------- 415
L G C+ G G +I ++ G L +L ++ S S +
Sbjct: 91 NLLG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
S +AKG+ +L S +HR+L+ +L+ I D GL + + +D + V
Sbjct: 149 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-V 202
Query: 476 LKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533
+K +A + ++APE + +T SD++++G+ + ++ + M + ++ F
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---FYK 259
Query: 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + E A++ + C DP RPT + +++
Sbjct: 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F+++ +GKG+F V+KG R +VAI+ I++ + E + + + +L+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ + G + ++I ++ G L+ LD + +I+ I KG+ Y
Sbjct: 67 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDY 119
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LHS + +HR++ VL+ + +AD G+ L D + +K + +G +
Sbjct: 120 LHSEKK-----IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNTFVGTPFW 170
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN----LK 540
+APE + + ++DI++ G+ +++ G L F I +N L+
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGE---PPHSELHPMKVLF--LIPKNNPPTLE 225
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +S+ L + C +++P RPT + +++
Sbjct: 226 GNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F+++ +GKG+F V+KG R +VAI+ I++ + E + + + +L+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+ + G + ++I ++ G L+ LD + +I+ I KG+ Y
Sbjct: 67 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDY 119
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LHS + +HR++ VL+ + +AD G+ L D + +K + +G +
Sbjct: 120 LHSEKK-----IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNXFVGTPFW 170
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN----LK 540
+APE + + ++DI++ G+ +++ G L F I +N L+
Sbjct: 171 MAPEVIKQSAYDSKADIWSLGITAIELARGE---PPHSELHPMKVLF--LIPKNNPPTLE 225
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
G +S+ L + C +++P RPT + +++
Sbjct: 226 GNYSKP----LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D + VA++ + ++ +E + L +L+ L H NI+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV-------------- 415
L G C+ G G +I ++ G L +L ++ S S +
Sbjct: 114 NLLG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
S +AKG+ +L S +HR+L+ +L+ I D GL + + +D + V
Sbjct: 172 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-V 225
Query: 476 LKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533
+K +A + ++APE + +T SD++++G+ + ++ + M + ++ F
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---FYK 282
Query: 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + E A++ + C DP RPT + +++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D + VA++ + ++ +E + L +L+ L H NI+
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV-------------- 415
L G C+ G G +I ++ G L +L ++ S S +
Sbjct: 107 NLLG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
S +AKG+ +L S +HR+L+ +L+ I D GL + + +D + V
Sbjct: 165 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-V 218
Query: 476 LKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533
+K +A + ++APE + +T SD++++G+ + ++ + M + + F
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYK 275
Query: 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + E A++ + C DP RPT + +++
Sbjct: 276 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D + VA++ + ++ +E + L +L+ L H NI+
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV-------------- 415
L G C+ G G +I ++ G L +L ++ S S +
Sbjct: 109 NLLG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
S +AKG+ +L S +HR+L+ +L+ I D GL + + +D + V
Sbjct: 167 SFSYQVAKGMAFLASKNC-----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-V 220
Query: 476 LKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533
+K +A + ++APE + +T SD++++G+ + ++ + M + + F
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---DSKFYK 277
Query: 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + E A++ + C DP RPT + +++
Sbjct: 278 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 315 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE--AEFVKGLYLLTSLRHENIIRL 371
+ LG G F V G + G VA++ +N +S + + + + L RH +II+L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+ + F++ ++ G+L Y+ + V + R + I + Y H
Sbjct: 77 YQVISTPT--DFFMVMEYVSGGELFDYICKH---GRVEEMEAR-RLFQQILSAVDYCH-- 128
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGYLAPEYV 490
+ +VHR+L E VL+D N IAD GL +++D L+TS + Y APE V
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPE-V 181
Query: 491 TTGRFT--ERSDIFAFGVIILQILTGSL 516
+GR DI++ GVI+ +L G+L
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 128/283 (45%), Gaps = 44/283 (15%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYL------------------DQEEGSSNVLDW 411
L G C+ G G +I ++ G L +L +++ S ++L +
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 412 STRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI 471
S++V A+G+ +L S +HR+++ VL+ I D GL + + +D
Sbjct: 172 SSQV------AQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 472 VFSVLKTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
+ ++K +A + ++APE + +T +SD++++G+++ +I + L + + ++
Sbjct: 221 NY-IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV---NS 276
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
F + + + + C +P +RPT + +
Sbjct: 277 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 117/269 (43%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T S + + + ++ L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF--SVLKTSAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + A Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIMKD 264
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 54/287 (18%)
Query: 317 LGKGNFSSVYKGTL-----RDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369
LG G F V + T D L VA++ + T+ E+ + L +++ L +HENI+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLD-----------WSTR--VS 416
L G C+ G G +I ++ G L +L ++ S VL+ STR +
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRK---SRVLETDPAFAIANSTLSTRDLLH 168
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
+A+G+ +L S +HR+++ VL+ I D GL + + +D + ++
Sbjct: 169 FSSQVAQGMAFLASKNC-----IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IV 222
Query: 477 KTSAAM--GYLAPEYVTTGRFTERSDIFAFGVIILQILT-------GSLVLTSSMRLAAE 527
K +A + ++APE + +T +SD++++G+++ +I + G LV + +L +
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282
Query: 528 SATFEN--FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAV 572
F +N+ +S +A C +P +RPT + +
Sbjct: 283 GYQMAQPAFAPKNI---YSIMQA---------CWALEPTHRPTFQQI 317
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 294 LNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSIN---VTSCKSE 349
LN R +L+ ++ + F +LGKG+F V+ + AI+++ V
Sbjct: 4 LNKERPSLQ-IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 62
Query: 350 EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL 409
E V+ L + H + + FC + + F + ++ G L ++ S +
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKF 116
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LL 467
D S I G+ +LHS IV+R+L ++ +L+D+ + IAD G+ K +L
Sbjct: 117 DLSRATFYAAEIILGLQFLHSK-----GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 171
Query: 468 ADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
D KT+ G Y+APE + ++ D ++FGV++ ++L G S
Sbjct: 172 GD------AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ----SPFHG 221
Query: 525 AAESATFENF-IDRNLKGKFSESEAAKLGKMALVCTHEDPENR 566
E F + +D ++ E EA L V +PE R
Sbjct: 222 QDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV---REPEKR 261
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T S + + + ++ L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKT-SAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + L T + Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIMKD 264
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T S + + + ++ L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKT-SAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + L T + Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIMKD 264
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTS---CKSEEAEFVKGLYLLTSLRHENIIRLRG 373
+G+G+F +VYKG L T V + + KSE F + L L+H NI+R
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 374 FCCS--RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
S +G+ L+ + G L YL + V S I KG+ +LH+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKR----FKVXKIKVLRSWCRQILKGLQFLHT- 147
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
P I+HR+L + + I + I D GL L +V+ T + APE
Sbjct: 148 --RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPE---FXAPEXY 202
Query: 491 TTGRFTERSDIFAFGVIILQILT 513
++ E D++AFG L+ T
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXAT 224
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 50 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109
N L G IP I L L L + H ++G IPD L + L LD S+N+L GT+P S++
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 110 NNAELLFLDVQNNTLSGIVPSA 131
+ L+ + N +SG +P +
Sbjct: 147 SLPNLVGITFDGNRISGAIPDS 168
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 31 FQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKL 90
F Q+K + V L N L+G +P I SL +L +T NR++G IPDS G+ KL
Sbjct: 120 FLSQIKTL----VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKL 175
Query: 91 -KRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSG 126
+ +S N L G IP + A N L F+D+ N L G
Sbjct: 176 FTSMTISRNRLTGKIPPTFA-NLNLAFVDLSRNMLEG 211
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 51 QLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLAN 110
++G IP + +K+L L +N L+G +P S+ +L L + N + G IP+S +
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 111 NAELLF-LDVQNNTLSGIVPSALKRLNGGF 139
++L + + N L+G +P LN F
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAF 201
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 56 IPAQIGSLKSLSVLTLQH-NRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAEL 114
IP+ + +L L+ L + N L G IP ++ L +L L ++ ++ G IP+ L+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 115 LFLDVQNNTLSGIVPSALKRLNG--GFQFQNN 144
+ LD N LSG +P ++ L G F N
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 62/159 (38%), Gaps = 53/159 (33%)
Query: 50 NQLTGNIPAQIGSLKSL-SVLTLQHNRLNGGIPDSLGNL--------------------- 87
N+++G IP GS L + +T+ NRL G IP + NL
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFG 218
Query: 88 -------------------GK------LKRLDLSFNSLFGTIPESLANNAELLFLDVQNN 122
GK L LDL N ++GT+P+ L L L+V N
Sbjct: 219 SDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278
Query: 123 TLSGIVPSA--LKRLNGGFQFQNNPGLCGDGIASLRACT 159
L G +P L+R + + NN LCG + L ACT
Sbjct: 279 NLCGEIPQGGNLQRFDVS-AYANNKCLCG---SPLPACT 313
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 294 LNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSIN---VTSCKSE 349
LN R +L+ ++ + F +LGKG+F V+ + AI+++ V
Sbjct: 3 LNKERPSLQ-IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDV 61
Query: 350 EAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL 409
E V+ L + H + + FC + + F + ++ G L ++ S +
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHIQ----SCHKF 115
Query: 410 DWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LL 467
D S I G+ +LHS IV+R+L ++ +L+D+ + IAD G+ K +L
Sbjct: 116 DLSRATFYAAEIILGLQFLHSK-----GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170
Query: 468 ADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
D KT+ G Y+APE + ++ D ++FGV++ ++L G S
Sbjct: 171 GD------AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ----SPFHG 220
Query: 525 AAESATFENF-IDRNLKGKFSESEAAKLGKMALVCTHEDPENR 566
E F + +D ++ E EA L V +PE R
Sbjct: 221 QDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV---REPEKR 260
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 33/279 (11%)
Query: 304 VESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS 362
+ + F+++ +GKG+F V+KG R +VAI+ I++ + E + + + +L+
Sbjct: 18 IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ 77
Query: 363 LRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+ + G + ++I ++ G L + D +++ I
Sbjct: 78 CDSSYVTKYYGSYLKGSK--LWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEIL 130
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
KG+ YLHS + +HR++ VL+ +Q + +AD G+ L D + +K + +
Sbjct: 131 KGLDYLHSEKK-----IHRDIKAANVLLSEQGDVKLADFGVAGQLTD----TQIKRNTFV 181
Query: 483 G---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN- 538
G ++APE + + ++DI++ G+ +++ G + + F I +N
Sbjct: 182 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE---PPNSDMHPMRVLF--LIPKNN 236
Query: 539 ---LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
L G F++S + C ++DP RPT + +++
Sbjct: 237 PPTLVGDFTKS----FKEFIDACLNKDPSFRPTAKELLK 271
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKS----EEAEFVKGLYL 359
AT + V +G G + +VYK RD G VA++S+ V + + V L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 360 LTSLRHENIIRLRGFCC-SRGRGE--CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
L + H N++RL C SR E L+++ + L YLD+ L T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG--LPAETIKD 116
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDI-VFSV 475
++ +G+ +LH++ IVHR+L E +L+ +AD GL ++ + + +F V
Sbjct: 117 LMRQFLRGLDFLHAN-----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV 171
Query: 476 LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ T + Y APE + + D+++ G I ++
Sbjct: 172 VVT---LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 32/273 (11%)
Query: 311 FSEVNLLGKGNFSSV---YKGTLRDGTLVAIRSIN--VTSCKSEEAEFVKGLYLLTSLRH 365
+ V LG+G+F V Y T G VA++ IN V + + + + L LRH
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
+II+L + + + E ++ ++A +L Y+ Q + S I +
Sbjct: 68 PHIIKL--YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE----QEARRFFQQIISAV 120
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGY 484
Y H + IVHR+L E +L+D+ N IAD GL ++ D + LKTS + Y
Sbjct: 121 EYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNY 172
Query: 485 LAPEYVTTGRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK-GK 542
APE ++ + D+++ GVI+ +L L + F+N + K
Sbjct: 173 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE----SIPVLFKNISNGVYTLPK 228
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
F AA L K L+ +P NR ++ ++++
Sbjct: 229 FLSPGAAGLIKRMLIV---NPLNRISIHEIMQD 258
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 311 FSEVNLLGKGNFSSV---YKGTLRDGTLVAIRSIN--VTSCKSEEAEFVKGLYLLTSLRH 365
+ V LG+G+F V Y T G VA++ IN V + + + + L LRH
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
+II+L + + + E ++ ++A +L Y+ Q + S I +
Sbjct: 74 PHIIKL--YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE----QEARRFFQQIISAV 126
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGY 484
Y H + IVHR+L E +L+D+ N IAD GL ++ D + LKTS + Y
Sbjct: 127 EYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNY 178
Query: 485 LAPEYVTTGRFT-ERSDIFAFGVIILQILTGSL 516
APE ++ + D+++ GVI+ +L L
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T S + + + ++ L H NI++L F
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKL--F 72
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL + + + I + Y H
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYL----VAHGWMKEKEARAKFRQIVSAVQYCHQK--- 125
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKT-SAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + L T + Y APE
Sbjct: 126 --FIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDTFCGSPPYAAPELFQG 179
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMST 231
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E ++++
Sbjct: 232 DCENLLKKFLIL---NPSKRGTLEQIMKD 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 32/273 (11%)
Query: 311 FSEVNLLGKGNFSSV---YKGTLRDGTLVAIRSIN--VTSCKSEEAEFVKGLYLLTSLRH 365
+ V LG+G+F V Y T G VA++ IN V + + + + L LRH
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
+II+L + + + E ++ ++A +L Y+ Q + S I +
Sbjct: 64 PHIIKL--YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE----QEARRFFQQIISAV 116
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGY 484
Y H + IVHR+L E +L+D+ N IAD GL ++ D + LKTS + Y
Sbjct: 117 EYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNY 168
Query: 485 LAPEYVTTGRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK-GK 542
APE ++ + D+++ GVI+ +L L + F+N + K
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE----SIPVLFKNISNGVYTLPK 224
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
F AA L K L+ +P NR ++ ++++
Sbjct: 225 FLSPGAAGLIKRMLIV---NPLNRISIHEIMQD 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEAEFVKGLY-LLTSLRH 365
F + +LG+G+F V+ G+ L A++ + + K + K +L + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKG 424
I++L + G+ +LI DF G L L +E V+ V + +A
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALA 138
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD--DIVFSVLKTSAAM 482
+ +LHS I++R+L E +L+D++ + + D GL K D +S T +
Sbjct: 139 LDHLHSL-----GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---V 190
Query: 483 GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
Y+APE V T+ +D ++FGV++ ++LTG+L R
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 34/273 (12%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VAI+ I+ T + + + ++ L H NI++L F
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL--F 77
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+LI ++A G++ YL + + S I + Y H
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSAVQYCHQKR-- 131
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGYLAPEYVTTG 493
IVHR+L E +L+D N IAD G V L T + Y APE
Sbjct: 132 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFT---VGGKLDTFCGSPPYAAPELFQGK 185
Query: 494 RFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ESE 547
++ D+++ GVI+ +++GSL + + +R L+GK+ ++
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMSTD 237
Query: 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
L K LV +P R T+E ++++ + A
Sbjct: 238 CENLLKRFLVL---NPIKRGTLEQIMKDRWINA 267
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 32/272 (11%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VAI+ I+ T + + + ++ L H NI++L F
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL--F 80
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+LI ++A G++ YL + + S I + Y H
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSAVQYCHQKR-- 134
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR 494
IVHR+L E +L+D N IAD G + + A Y APE +
Sbjct: 135 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAFCGAPPYAAPELFQGKK 189
Query: 495 FT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ESEA 548
+ D+++ GVI+ +++GSL + + +R L+GK+ ++
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYMSTDC 241
Query: 549 AKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580
L K LV +P R T+E ++++ + A
Sbjct: 242 ENLLKRFLVL---NPIKRGTLEQIMKDRWINA 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 311 FSEVNLLGKGNFSSV---YKGTLRDGTLVAIRSIN--VTSCKSEEAEFVKGLYLLTSLRH 365
+ V LG+G+F V Y T G VA++ IN V + + + + L LRH
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGI 425
+II+L + + + E ++ ++A +L Y+ Q + S I +
Sbjct: 73 PHIIKL--YDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE----QEARRFFQQIISAV 125
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGY 484
Y H + IVHR+L E +L+D+ N IAD GL ++ D + LKTS + Y
Sbjct: 126 EYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNY 177
Query: 485 LAPEYVTTGRFT-ERSDIFAFGVIILQILTGSL 516
APE ++ + D+++ GVI+ +L L
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEAEFVKGLY-LLTSLRH 365
F + +LG+G+F V+ G+ L A++ + + K + K +L + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKG 424
I++L + G+ +LI DF G L L +E V+ V + +A
Sbjct: 87 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALA 139
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD--DIVFSVLKTSAAM 482
+ +LHS I++R+L E +L+D++ + + D GL K D +S T +
Sbjct: 140 LDHLHSL-----GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---V 191
Query: 483 GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
Y+APE V T+ +D ++FGV++ ++LTG+L R
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 232
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 311 FSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSC-KSEEAEFVKG-LYLLTSLRHEN 367
F NLLGKG+F+ VY+ ++ G VAI+ I+ + K+ + V+ + + L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+ L + +L+ + G++++YL + + + I G+ Y
Sbjct: 73 ILELYNYF--EDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLY 127
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LHS I+HR+L++ +L+ + N IAD G LA + K G Y
Sbjct: 128 LHSH-----GILHRDLTLSNLLLTRNMNIKIADFG----LATQLKMPHEKHYTLCGTPNY 178
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTG 514
++PE T SD+++ G + +L G
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 33/291 (11%)
Query: 299 LNLEEVESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGL 357
++L + F V L+G G + VYKG ++ G L AI+ ++VT EE E + +
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEI 71
Query: 358 YLLTSL-RHENIIRLRGFCCSRG----RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWS 412
+L H NI G + + +L+ +F G ++ + +G++ +W
Sbjct: 72 NMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI 131
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 472
I I +G+ +LH +V +HR++ + VL+ + + D G+ L
Sbjct: 132 --AYICREILRGLSHLHQHKV-----IHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--- 181
Query: 473 FSVLKTSAAMG---YLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524
+V + + +G ++APE + + +SD+++ G+ +++ G+ L +
Sbjct: 182 -TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD---M 237
Query: 525 AAESATFENFIDRNLKGKF-SESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
A F I RN + S+ + K C ++ RP E +++
Sbjct: 238 HPMRALF--LIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGT----LVAIRSINVTSCKSEEAEFVKGLY-LLTSLRH 365
F + +LG+G+F V+ G+ L A++ + + K + K +L + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 366 ENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKG 424
I++L + G+ +LI DF G L L +E V+ V + +A
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALA 138
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD--DIVFSVLKTSAAM 482
+ +LHS I++R+L E +L+D++ + + D GL K D +S T +
Sbjct: 139 LDHLHSL-----GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGT---V 190
Query: 483 GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
Y+APE V T+ +D ++FGV++ ++LTG+L R
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKS----EEAEFVKGLYL 359
AT + V +G G + +VYK RD G VA++S+ V + + V L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 360 LTSLRHENIIRLRGFCC-SRGRGE--CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
L + H N++RL C SR E L+++ + L YLD+ L T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG--LPAETIKD 116
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ +G+ +LH++ IVHR+L E +L+ +AD GL ++ + + + +
Sbjct: 117 LMRQFLRGLDFLHAN-----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV 171
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ + Y APE + + D+++ G I ++
Sbjct: 172 VVT--LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 19/262 (7%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG G F V+ R G I++IN + + + +L SL H NII++ F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI--FE 87
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+++ + G+L + + + L ++ + + Y HS V
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV-- 145
Query: 436 PAIVHRNLSVEKVLIDQQ--FNPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
VH++L E +L +P+ I D GL +L D S A+ Y+APE V
Sbjct: 146 ---VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTAL-YMAPE-VFK 199
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLT-SSMRLAAESATFENFIDRNLKGKFSESEAAKL 551
T + DI++ GV++ +LTG L T +S+ + AT++ + ++ + +A L
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE-PNYAVECRPLTPQAVDL 258
Query: 552 GKMALVCTHEDPENRPTMEAVI 573
K L +DPE RP+ V+
Sbjct: 259 LKQMLT---KDPERRPSAAQVL 277
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE---AEFVKGLYLLTSLRHENIIRLRG 373
+G+G + VYK G A++ I + K +E + ++ + +L L+H NI++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
++ R L+++ + L K LD EG L+ T S ++ + GI Y H V
Sbjct: 68 VIHTKKR--LVLVFEHLDQD-LKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-T 492
+HR+L + +LI+++ IAD GL + V + Y AP+ + +
Sbjct: 122 -----LHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYTHEVVTLWYRAPDVLMGS 175
Query: 493 GRFTERSDIFAFGVIILQILTGS 515
+++ DI++ G I +++ G+
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGA 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 315 NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE--AEFVKGLYLLTSLRHENIIRL 371
+ LG G F V G + G VA++ +N +S + + + + L RH +II+L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+ + F++ ++ G+L Y+ + V + R + I + Y H
Sbjct: 77 YQVISTPT--DFFMVMEYVSGGELFDYICKH---GRVEEMEAR-RLFQQILSAVDYCH-- 128
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGYLAPEYV 490
+ +VHR+L E VL+D N IAD GL +++D L+ S + Y APE V
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---EFLRDSCGSPNYAAPE-V 181
Query: 491 TTGRFT--ERSDIFAFGVIILQILTGSL 516
+GR DI++ GVI+ +L G+L
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTL 209
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE---AEFVKGLYLLTSLRHENIIRLRG 373
+G+G + VYK G A++ I + K +E + ++ + +L L+H NI++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
++ R L+++ + L K LD EG L+ T S ++ + GI Y H V
Sbjct: 68 VIHTKKR--LVLVFEHLDQD-LKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-T 492
+HR+L + +LI+++ IAD GL + V + Y AP+ + +
Sbjct: 122 -----LHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYTHEVVTLWYRAPDVLMGS 175
Query: 493 GRFTERSDIFAFGVIILQILTGS 515
+++ DI++ G I +++ G+
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 111/259 (42%), Gaps = 19/259 (7%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G G F+ V + G +VAI+ ++ + S+ + L +LRH++I +L +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL--YH 75
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
+ F++ ++ P G+L Y+ ++ S TRV + I + Y+HS
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-VFRQIVSAVAYVHSQ---- 127
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRF 495
HR+L E +L D+ + D GL + + + ++ Y APE + +
Sbjct: 128 -GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSY 186
Query: 496 T-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKM 554
+D+++ G+++ ++ G L +A D + S S L +M
Sbjct: 187 LGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYD--VPKWLSPSSILLLQQM 244
Query: 555 ALVCTHEDPENRPTMEAVI 573
V DP+ R +M+ ++
Sbjct: 245 LQV----DPKKRISMKNLL 259
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEE---AEFVKGLYLLTSLRHENIIRLRG 373
+G+G + VYK G A++ I + K +E + ++ + +L L+H NI++L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
++ R L+++ + L K LD EG L+ T S ++ + GI Y H V
Sbjct: 68 VIHTKKR--LVLVFEHLDQD-LKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-T 492
+HR+L + +LI+++ IAD GL + V + Y AP+ + +
Sbjct: 122 -----LHRDLKPQNLLINREGELKIADFGLARAFGIP-VRKYTHEIVTLWYRAPDVLMGS 175
Query: 493 GRFTERSDIFAFGVIILQILTGS 515
+++ DI++ G I +++ G+
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGT 198
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKS----EEAEFVKGLYL 359
AT + V +G G + +VYK RD G VA++S+ V + + V L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR 59
Query: 360 LTSLRHENIIRLRGFCC-SRGRGE--CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
L + H N++RL C SR E L+++ + L YLD+ L T
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG--LPAETIKD 116
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ +G+ +LH++ IVHR+L E +L+ +AD GL ++ + + +
Sbjct: 117 LMRQFLRGLDFLHAN-----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV 171
Query: 477 KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ + Y APE + + D+++ G I ++
Sbjct: 172 VVT--LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEF-------VKG 356
AT + V +G G + +VYK RD G VA++S+ V + V
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 357 LYLLTSLRHENIIRLRGFCC-SRGRGE--CFLIYDFAPKGKLSKYLDQEEGSSNVLDWST 413
L L + H N++RL C SR E L+++ + L YLD+ L T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG--LPAET 121
Query: 414 RVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF 473
++ +G+ +LH++ IVHR+L E +L+ +AD GL ++ + +
Sbjct: 122 IKDLMRQFLRGLDFLHAN-----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 176
Query: 474 SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ + + + Y APE + + D+++ G I ++
Sbjct: 177 TPVVVT--LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T S + + + + L H NI++L F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKL--F 79
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKFRQIVS---AVQYCHQK--- 132
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF--SVLKTSAAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD G +++ F + A Y APE
Sbjct: 133 --FIVHRDLKAENLLLDADXNIKIADFG----FSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 493 GRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-----ES 546
++ D+++ GVI+ +++GSL + + +R L+GK+ +
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKYRIPFYXST 238
Query: 547 EAAKLGKMALVCTHEDPENRPTMEAVIEE 575
+ L K L+ +P R T+E + ++
Sbjct: 239 DCENLLKKFLIL---NPSKRGTLEQIXKD 264
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 311 FSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLR-HEN 367
+ V LGKG + V+K R G +VA++ I S +A+ + + +LT L HEN
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+ L + + +L++D+ + L + +N+L+ + ++ + K I Y
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYM-ETDLHAVI-----RANILEPVHKQYVVYQLIKVIKY 124
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH------KLLADDIVFSVLKTS-- 479
LHS ++HR++ +L++ + + +AD GL + + ++I S+ + +
Sbjct: 125 LHSG-----GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 480 ------------AAMGYLAPEYVT-TGRFTERSDIFAFGVIILQILTGSLVLTSS 521
A Y APE + + ++T+ D+++ G I+ +IL G + S
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 50/288 (17%)
Query: 311 FSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F E+ +LG+G F V K D AI+ I T K + + + LL SL H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLNHQYVV 65
Query: 370 R-----------LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
R ++ + + F+ ++ G L + E + ++ +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW---RLF 122
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH----------KLLA 468
I + + Y+HS I+HR+L + ID+ N I D GL KL +
Sbjct: 123 RQILEALSYIHSQ-----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 469 DDIVFSVLKTSAAMG---YLAPEYVT-TGRFTERSDIFAFGVIILQIL----TGSLVLTS 520
++ S ++A+G Y+A E + TG + E+ D+++ G+I +++ TG +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
Query: 521 SMRLAAESATF-ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRP 567
+L + S F +F D +K + K+ + DP RP
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVE---------KKIIRLLIDHDPNKRP 276
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENII 369
+ ++ +G+G + VYK G +VA++ I + + + + ++ + LL L H NI+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 370 RLRGFCCSRGRGECF-LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L S C L+++F K L K LD E + + D ++ + + +G+ +
Sbjct: 83 SLIDVIHSE---RCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKI-YLYQLLRGVAHC 135
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
H I+HR+L + +LI+ +AD GL + V S + Y AP+
Sbjct: 136 HQHR-----ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVVTLWYRAPD 189
Query: 489 YVT-TGRFTERSDIFAFGVIILQILTGS 515
+ + +++ DI++ G I +++TG
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENII 369
+ ++ +G+G + VYK G +VA++ I + + + + ++ + LL L H NI+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 370 RLRGFCCSRGRGECF-LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L S C L+++F K L K LD E + + D ++ + + +G+ +
Sbjct: 83 SLIDVIHSE---RCLTLVFEFMEKD-LKKVLD--ENKTGLQDSQIKI-YLYQLLRGVAHC 135
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
H I+HR+L + +LI+ +AD GL + V S + Y AP+
Sbjct: 136 HQHR-----ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVVTLWYRAPD 189
Query: 489 YVT-TGRFTERSDIFAFGVIILQILTGS 515
+ + +++ DI++ G I +++TG
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ L H+NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 113 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 167
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 168 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 278
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 279 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 304 VESATQCFSE----VNLLGKGNFSSVY--KGTLRDGTLVAIRSINVTSCK--SEEAEFVK 355
V+ +T FS+ +LGKG+F V K + G A++ I+ K +++ ++
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV 415
+ LL L H NI++L F +G +L+ + G+L + + S V
Sbjct: 76 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAA 129
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLH------KL 466
II + GI Y+H K IVHR+L E +L++ + N I D GL K
Sbjct: 130 RIIRQVLSGITYMH-----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184
Query: 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ D I Y+APE V G + E+ D+++ GVI+ +L+G
Sbjct: 185 MKDKI--------GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 63 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 117
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L E +LI+ + +AD GL + V + + Y
Sbjct: 118 LAFCHSHRV-----LHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 171
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 112/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ L H+NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 99 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 153
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 154 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 264
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 265 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 115/288 (39%), Gaps = 55/288 (19%)
Query: 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRG 373
L+GKG F VY G R VAIR I++ ++ + F + + RHEN++ G
Sbjct: 39 ELIGKGRFGQVYHG--RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 374 FCCS-----------RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
C S +GR +Y K+ VLD + I I
Sbjct: 97 ACMSPPHLAIITSLCKGR----TLYSVVRDAKI------------VLDVNKTRQIAQEIV 140
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK----LLADDIVFSVLKT 478
KG+GYLH+ I+H++L + V D +I D GL L A +
Sbjct: 141 KGMGYLHAK-----GILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 479 SAAMGYLAPEYVTTGR---------FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
+ + +LAPE + F++ SD+FA G I ++ + AE+
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ---PAEAI 251
Query: 530 TFENFIDRNLKGKFSESEAAK-LGKMALVCTHEDPENRPTMEAVIEEL 576
++ + +K S+ K + + L C + E RPT +++ L
Sbjct: 252 IWQ--MGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 207 VAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDA 260
Query: 481 --AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEG 317
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 318 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 62 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 116
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L E +LI+ + +AD GL + V + + Y
Sbjct: 117 LAFCHSHRV-----LHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 170
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 202 VAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDA 255
Query: 481 --AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEG 312
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 313 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR--- 372
LG G F V + +D G VAI+ + + ++ L H N++ R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 373 -GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G L ++ G L KYL+Q E + + R +++ I+ + YLH +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN 141
Query: 432 EVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
I+HR+L E +++ Q+ I D G K L + + + + YLAPE
Sbjct: 142 R-----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQYLAPE 194
Query: 489 YVTTGRFTERSDIFAFGVIILQILTG 514
+ ++T D ++FG + + +TG
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR--- 372
LG G F V + +D G VAI+ + + ++ L H N++ R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 373 -GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G L ++ G L KYL+Q E + + R +++ I+ + YLH +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN 140
Query: 432 EVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
I+HR+L E +++ Q+ I D G K L + + + + YLAPE
Sbjct: 141 R-----IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQYLAPE 193
Query: 489 YVTTGRFTERSDIFAFGVIILQILTG 514
+ ++T D ++FG + + +TG
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 209 VAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDA 262
Query: 481 --AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEG 319
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 320 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 304 VESATQCFSE----VNLLGKGNFSSVY--KGTLRDGTLVAIRSINVTSCK--SEEAEFVK 355
V+ +T FS+ +LGKG+F V K + G A++ I+ K +++ ++
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 98
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV 415
+ LL L H NI++L F +G +L+ + G+L + + S V
Sbjct: 99 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAA 152
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLH------KL 466
II + GI Y+H K IVHR+L E +L++ + N I D GL K
Sbjct: 153 RIIRQVLSGITYMH-----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 207
Query: 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ D I Y+APE V G + E+ D+++ GVI+ +L+G
Sbjct: 208 MKDKI--------GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
+AKG+ +L S + +HR+L+ +L+ ++ I D GL + + D + V K A
Sbjct: 200 VAKGMEFLASRKC-----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDA 253
Query: 481 --AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538
+ ++APE + +T +SD+++FGV++ +I + +++ E F +
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---FCRRLKEG 310
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ + + ++ + L C H +P RPT ++E L
Sbjct: 311 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 38/228 (16%)
Query: 304 VESATQCFSE----VNLLGKGNFSSVY--KGTLRDGTLVAIRSINVTSCK--SEEAEFVK 355
V+ +T FS+ +LGKG+F V K + G A++ I+ K +++ ++
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 99
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV 415
+ LL L H NI++L F +G +L+ + G+L + + S V
Sbjct: 100 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAA 153
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLH------KL 466
II + GI Y+H K IVHR+L E +L++ + N I D GL K
Sbjct: 154 RIIRQVLSGITYMH-----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 208
Query: 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ D I Y+APE V G + E+ D+++ GVI+ +L+G
Sbjct: 209 MKDKI--------GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F L K++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L E +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F L K++D + L S + + +G
Sbjct: 62 HPNIVKLLDVIHTENK--LYLVFEFL-SMDLKKFMDASALTGIPLPLIK--SYLFQLLQG 116
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L E +LI+ + +AD GL + V + + Y
Sbjct: 117 LAFCHSHRV-----LHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 170
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
+S +A+G+ +L S + +HR+L+ +L+ + I D GL + + + +
Sbjct: 202 ISYSFQVARGMEFLSSRKC-----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDY- 255
Query: 475 VLK--TSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQI--LTGSLVLTSSMRLAAESAT 530
V K T + ++APE + ++ +SD++++GV++ +I L GS M
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQM-----DED 310
Query: 531 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
F + + ++ + E ++ ++ L C H DP+ RP ++E+L
Sbjct: 311 FCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 317 LGKGNFSSVYK----GTLRDGT--LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE-NII 369
LG+G F V + G + T VA++ + + SE + L +LT + H N++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYL 399
L G C +G G +I ++ G LS YL
Sbjct: 95 NLLGACTKQG-GPLMVIVEYCKYGNLSNYL 123
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 304 VESATQCFSE----VNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVK 355
V+ +T FS+ +LGKG+F V K T ++ + I V K+++ ++
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESLLR 81
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRV 415
+ LL L H NI++L F +G +L+ + G+L + + S V
Sbjct: 82 EVQLLKQLDHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEV----DAA 135
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCGLH------KL 466
II + GI Y+H K IVHR+L E +L++ + N I D GL K
Sbjct: 136 RIIRQVLSGITYMH-----KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 190
Query: 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ D I Y+APE V G + E+ D+++ GVI+ +L+G
Sbjct: 191 MKDKI--------GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHE 366
+ F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI++L + + +L+++F L K++D + L S + + +G+
Sbjct: 70 NIVKLLDVIHTENK--LYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 124
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ HS V +HR+L + +LI+ + +AD GL + V + + Y A
Sbjct: 125 FCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRA 178
Query: 487 PEYVTTGRFTERS-DIFAFGVIILQILT 513
PE + ++ + DI++ G I +++T
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRL 371
V +LGKG+F V K R A++ IN S K+++ + ++ + LL L H NI++L
Sbjct: 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
F +++ + G+L + + + S II + GI Y+H
Sbjct: 87 --FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----HDAARIIKQVFSGITYMH-- 138
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
K IVHR+L E +L++ + I D GL + +A Y+APE
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY--YIAPE 193
Query: 489 YVTTGRFTERSDIFAFGVIILQILTGS 515
V G + E+ D+++ GVI+ +L+G+
Sbjct: 194 -VLRGTYDEKCDVWSAGVILYILLSGT 219
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 90 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 144
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 145 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 255
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 256 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 65 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 120 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 173
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 174 ILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 295 NSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE-AE 352
+S R NL + + ++ V +LGKG+F V K R A++ IN S K+++ +
Sbjct: 8 SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 353 FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWS 412
++ + LL L H NI++L F +++ + G+L + + + S
Sbjct: 68 ILREVELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----H 121
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLAD 469
II + GI Y+H K IVHR+L E +L++ + I D GL
Sbjct: 122 DAARIIKQVFSGITYMH-----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
+ +A Y+APE V G + E+ D+++ GVI+ +L+G+
Sbjct: 177 NTKMKDRIGTAY--YIAPE-VLRGTYDEKCDVWSAGVILYILLSGT 219
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 295 NSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE-AE 352
+S R NL + + ++ V +LGKG+F V K R A++ IN S K+++ +
Sbjct: 8 SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 353 FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWS 412
++ + LL L H NI++L F +++ + G+L + + + S
Sbjct: 68 ILREVELLKKLDHPNIMKL--FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE----H 121
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLAD 469
II + GI Y+H K IVHR+L E +L++ + I D GL
Sbjct: 122 DAARIIKQVFSGITYMH-----KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
+ +A Y+APE V G + E+ D+++ GVI+ +L+G+
Sbjct: 177 NTKMKDRIGTAY--YIAPE-VLRGTYDEKCDVWSAGVILYILLSGT 219
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 113 CIGV--SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 167
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 168 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 278
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 279 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 98 CIGV--SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 152
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 153 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 263
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 98 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 152
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 153 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 263
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 264 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 63 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 117
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 118 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 171
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 61 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 115
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 116 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 169
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 61 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 115
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 116 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 169
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 99 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 153
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 154 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 264
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 265 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F L K++D + L S + + +G+ +
Sbjct: 72 VKLLDVIHTENK--LYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 127 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 180
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 66 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 121 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPE 174
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 62 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 116
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 117 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 170
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 61 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 115
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 116 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 169
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 65 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 119
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 120 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 173
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 174 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 63 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 117
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 118 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 171
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 61 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 115
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 116 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 169
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F L K++D + L S + + +G+ +
Sbjct: 69 VKLLDVIHTENK--LYLVFEFL-HQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 124 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 177
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 65 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 120 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 173
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 65 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 120 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 173
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L K++D + L S + + +G
Sbjct: 62 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 116
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 117 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWY 170
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 99 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 153
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 154 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 264
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 265 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 113 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 167
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 168 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 278
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 279 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHE 366
Q + ++ +G+G + +V+K R+ +VA++ + + + + ++ + LL L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL S + L+++F + L KY D G LD S + + KG+G
Sbjct: 62 NIVRLHDVLHSDKK--LTLVFEFCDQD-LKKYFDSCNGD---LDPEIVKSFLFQLLKGLG 115
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465
+ HS V +HR+L + +LI++ +AD GL +
Sbjct: 116 FCHSRNV-----LHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 115 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 169
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 170 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 280
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 281 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 105 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 159
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 160 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 270
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 271 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 65 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 120 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 173
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F + +LG G FS V+ R G L A++ I S ++ + +L ++HEN
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIK-KSPAFRDSSLENEIAVLKKIKHEN 67
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+ L S +L+ G+L + E G D S +I + + Y
Sbjct: 68 IVTLEDIYESTTH--YYLVMQLVSGGELFDRI-LERGVYTEKDASL---VIQQVLSAVKY 121
Query: 428 LHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
LH + IVHR+L E +L ++ +I D GL K+ + I+ + T GY
Sbjct: 122 LHEN-----GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP---GY 173
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+APE + +++ D ++ GVI +L G
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKS----EEAEFVKGLY 358
A Q + V +G+G + V+K RD G VA++ + V + + V L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 359 LLTSLRHENIIRLRGFC-CSRGRGECFLIYDFAPKGK-LSKYLDQ--EEGSSNVLDWSTR 414
L + H N++RL C SR E L F + L+ YLD+ E G T
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT----ETI 122
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
++ + +G+ +LHS V VHR+L + +L+ +AD GL ++ + F
Sbjct: 123 KDMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYS----FQ 173
Query: 475 VLKTS--AAMGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ TS + Y APE + + D+++ G I ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F + L ++D + L S + + +G
Sbjct: 61 HPNIVKLLDVIHTENK--LYLVFEFLHQD-LKDFMDASALTGIPLPLIK--SYLFQLLQG 115
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L E +LI+ + +AD GL + V + + Y
Sbjct: 116 LAFCHSHRV-----LHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 169
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 116/287 (40%), Gaps = 48/287 (16%)
Query: 311 FSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F E+ +LG+G F V K D AI+ I T K + + + LL SL H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVXLLASLNHQYVV 65
Query: 370 RL-------RGFC----CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
R R F + + F+ ++ L + E + ++ +
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY---WRLF 122
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH----------KLLA 468
I + + Y+HS I+HRNL + ID+ N I D GL KL +
Sbjct: 123 RQILEALSYIHSQ-----GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 469 DDIVFSVLKTSAAMG---YLAPEYVT-TGRFTERSDIFAFGVIILQIL----TGSLVLTS 520
++ S ++A+G Y+A E + TG + E+ D ++ G+I + + TG +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNI 237
Query: 521 SMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRP 567
+L + S F D N K K + K+ + DP RP
Sbjct: 238 LKKLRSVSIEFPPDFDDN-KXKVEK-------KIIRLLIDHDPNKRP 276
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 111/276 (40%), Gaps = 30/276 (10%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 125 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 179
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA---- 480
YL + +HR+++ L+ +A G + D S +
Sbjct: 180 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540
+ ++ PE G FT ++D ++FGV++ +I + + S + F+ +
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGGR 290
Query: 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
++ + ++ C PE+RP ++E +
Sbjct: 291 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 26/231 (11%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
+GKGNF+ V + G VA++ I+ T + + + ++ L H NI++L F
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL--F 80
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+L+ ++A G++ YL G + + I+ + Y H
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS---AVQYCHQK--- 133
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGYLAPEYVTTG 493
IVHR+L E +L+D N IAD G V + L T + Y APE
Sbjct: 134 --YIVHRDLKAENLLLDGDMNIKIADFGFSNEFT---VGNKLDTFCGSPPYAAPELFQGK 188
Query: 494 RFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++ D+++ GVI+ +++GSL + + +R L+GK+
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPF--------DGQNLKELRERVLRGKY 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKS----EEAEFVKGLY 358
A Q + V +G+G + V+K RD G VA++ + V + + V L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 359 LLTSLRHENIIRLRGFC-CSRGRGECFLIYDFAPKGK-LSKYLDQ--EEGSSNVLDWSTR 414
L + H N++RL C SR E L F + L+ YLD+ E G T
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT----ETI 122
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
++ + +G+ +LHS V VHR+L + +L+ +AD GL ++ + F
Sbjct: 123 KDMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYS----FQ 173
Query: 475 VLKTSAA--MGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ TS + Y APE + + D+++ G I ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 32/277 (11%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 116 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 170
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS--VLKTSAAM 482
YL + +HR+++ L+ +A G + A DI + K AM
Sbjct: 171 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRAGYYRKGGCAM 224
Query: 483 ---GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
++ PE G FT ++D ++FGV++ +I + + S + F+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGG 280
Query: 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ ++ + ++ C PE+RP ++E +
Sbjct: 281 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKS----EEAEFVKGLY 358
A Q + V +G+G + V+K RD G VA++ + V + + V L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 359 LLTSLRHENIIRLRGFC-CSRGRGECFLIYDFAPKGK-LSKYLDQ--EEGSSNVLDWSTR 414
L + H N++RL C SR E L F + L+ YLD+ E G T
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPT----ETI 122
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
++ + +G+ +LHS V VHR+L + +L+ +AD GL ++ + F
Sbjct: 123 KDMMFQLLRGLDFLHSHRV-----VHRDLKPQNILVTSSGQIKLADFGLARIYS----FQ 173
Query: 475 VLKTSAA--MGYLAPEYVTTGRFTERSDIFAFGVIILQIL 512
+ TS + Y APE + + D+++ G I ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 50/288 (17%)
Query: 311 FSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F E+ +LG+G F V K D AI+ I T K + + + LL SL H+ ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLNHQYVV 65
Query: 370 R-----------LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII 418
R ++ + + F+ ++ L + E + ++ +
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY---WRLF 122
Query: 419 IGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH----------KLLA 468
I + + Y+HS I+HR+L + ID+ N I D GL KL +
Sbjct: 123 RQILEALSYIHSQ-----GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 469 DDIVFSVLKTSAAMG---YLAPEYVT-TGRFTERSDIFAFGVIILQIL----TGSLVLTS 520
++ S ++A+G Y+A E + TG + E+ D+++ G+I +++ TG +
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNI 237
Query: 521 SMRLAAESATF-ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRP 567
+L + S F +F D +K + K+ + DP RP
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVE---------KKIIRLLIDHDPNKRP 276
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA+ I + T + + ++ + LL L H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 65 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 120 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 173
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA+ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++F + L K++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 114/277 (41%), Gaps = 32/277 (11%)
Query: 317 LGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F VY+G + VA++++ + +E +F+ +++ H+NI+R
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ------EEGSSNVLDWSTRVSIIIGIAKG 424
G S F++ + G L +L + + S +LD + + IA G
Sbjct: 139 CIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACG 193
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS--VLKTSAAM 482
YL + +HR+++ L+ +A G + A DI + K AM
Sbjct: 194 CQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGM-ARDIYRAGYYRKGGCAM 247
Query: 483 ---GYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
++ PE G FT ++D ++FGV++ +I + + S + F+
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS----KSNQEVLEFVTSGG 303
Query: 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEEL 576
+ ++ + ++ C PE+RP ++E +
Sbjct: 304 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 34/243 (13%)
Query: 286 GTGFSREHLNSFRLNLEEVESATQCFSE----VNLLGKGNFSSVY--KGTLRDGTLVAIR 339
G G +HL++ V+ +T FS+ +LGKG+F V K + G A++
Sbjct: 1 GPGSXXDHLHATPGXF--VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVK 57
Query: 340 SINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSK 397
I+ K +++ ++ + LL L H NI +L F +G +L+ + G+L
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFF--EDKGYFYLVGEVYTGGELFD 115
Query: 398 YLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQF 454
+ + S V II + GI Y H K IVHR+L E +L++ +
Sbjct: 116 EIISRKRFSEV----DAARIIRQVLSGITYXH-----KNKIVHRDLKPENLLLESKSKDA 166
Query: 455 NPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQI 511
N I D GL + K +G Y+APE V G + E+ D+++ GVI+ +
Sbjct: 167 NIRIIDFGLSTHFE-----ASKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYIL 220
Query: 512 LTG 514
L+G
Sbjct: 221 LSG 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 24/213 (11%)
Query: 311 FSEVNLLGKGNF---SSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++++ +G+G + SS Y + T VAI+ I+ ++ ++ + +L RHEN
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
+I +R + + +++ D + L K L ++ S++ + + + I +G
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICY-----FLYQILRG 156
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLAD---DIVFSVLKTSAA 481
+ Y+HS+ V +HR+L +LI+ + I D GL + +AD D + + A
Sbjct: 157 LKYIHSANV-----LHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVAT 210
Query: 482 MGYLAPEYVTTGR-FTERSDIFAFGVIILQILT 513
Y APE + + +T+ DI++ G I+ ++L+
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++ + L K++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEHVDQD-LKKFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F L ++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEFL-HQDLKTFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F L ++D + L S + + +G
Sbjct: 64 HPNIVKLLDVIHTENK--LYLVFEFL-SMDLKDFMDASALTGIPLPLIK--SYLFQLLQG 118
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 119 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 172
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLR 364
+ + F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H NI++L + + +L+++F L ++D + L S + + +G
Sbjct: 63 HPNIVKLLDVIHTENK--LYLVFEFL-SMDLKDFMDASALTGIPLPLIK--SYLFQLLQG 117
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ + HS V +HR+L + +LI+ + +AD GL + V + + Y
Sbjct: 118 LAFCHSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVVTLWY 171
Query: 485 LAPEYVTTGRFTERS-DIFAFGVIILQILT 513
APE + ++ + DI++ G I +++T
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
LGKG FS V + + G A + IN + + + + + L+H NI+RL
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ +L++D G+L + + E S + I I + I Y HS+
Sbjct: 97 I--QEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIAYCHSN--- 147
Query: 435 KPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT 491
IVHRNL E +L+ + +AD GL + D + + GYL+PE +
Sbjct: 148 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK 203
Query: 492 TGRFTERSDIFAFGVIILQILTG 514
+++ DI+A GVI+ +L G
Sbjct: 204 KDPYSKPVDIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
LGKG FS V + + G A + IN + + + + + L+H NI+RL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD- 72
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ +L++D G+L + + E S + I I + I Y HS+
Sbjct: 73 -SIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIAYCHSN--- 124
Query: 435 KPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT 491
IVHRNL E +L+ + +AD GL + D + + GYL+PE +
Sbjct: 125 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK 180
Query: 492 TGRFTERSDIFAFGVIILQILTG 514
+++ DI+A GVI+ +L G
Sbjct: 181 KDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
LGKG FS V + + G A + IN + + + + + L+H NI+RL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD- 71
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ +L++D G+L + + E S + I I + I Y HS+
Sbjct: 72 -SIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIAYCHSN--- 123
Query: 435 KPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT 491
IVHRNL E +L+ + +AD GL + D + + GYL+PE +
Sbjct: 124 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK 179
Query: 492 TGRFTERSDIFAFGVIILQILTG 514
+++ DI+A GVI+ +L G
Sbjct: 180 KDPYSKPVDIWACGVILYILLVG 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRDG-TLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHE 366
Q + ++ +G+G + +V+K R+ +VA++ + + + + ++ + LL L+H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL S + L+++F + L KY D G LD S + + KG+G
Sbjct: 62 NIVRLHDVLHSDKK--LTLVFEFCDQD-LKKYFDSCNGD---LDPEIVKSFLFQLLKGLG 115
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465
+ HS V +HR+L + +LI++ +A+ GL +
Sbjct: 116 FCHSRNV-----LHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-AEFVKGLYLLTSLRHENIIRLRGF 374
LGKG FS V + + G A + IN + + + + + L+H NI+RL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD- 72
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ +L++D G+L + + E S + I I + I Y HS+
Sbjct: 73 -SIQEESFHYLVFDLVTGGELFEDIVAREFYSE----ADASHCIQQILESIAYCHSN--- 124
Query: 435 KPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT 491
IVHRNL E +L+ + +AD GL + D + + GYL+PE +
Sbjct: 125 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF--AGTPGYLSPEVLK 180
Query: 492 TGRFTERSDIFAFGVIILQILTG 514
+++ DI+A GVI+ +L G
Sbjct: 181 KDPYSKPVDIWACGVILYILLVG 203
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 28/222 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKG-----LYLL 360
Q + +++G+G S V + R G A++ + VT+ + E+ E V+ ++L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 361 TSLR-HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
+ H +II L FL++D KG+L YL ++ S TR SI+
Sbjct: 154 RQVAGHPHIITL--IDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK---ETR-SIMR 207
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 479
+ + + +LH++ IVHR+L E +L+D ++D G L L
Sbjct: 208 SLLEAVSFLHANN-----IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL--C 260
Query: 480 AAMGYLAPEYV------TTGRFTERSDIFAFGVIILQILTGS 515
GYLAPE + T + + D++A GVI+ +L GS
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGS 302
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENI 368
F + +LGKG+F V +++ G L A++ + + ++ E + SL +
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
+ FCC + F + +F G L ++ + S D + I + +L
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFL 140
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
H I++R+L ++ VL+D + + +AD G+ K + + + + T+ G Y+
Sbjct: 141 HDK-----GIIYRDLKLDNVLLDHEGHCKLADFGMCK----EGICNGVTTATFCGTPDYI 191
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTG 514
APE + + D +A GV++ ++L G
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 303 EVESATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-----KG 356
+V+S + + +++ LG+G F++VYK ++ +VAI+ I + +SE + + +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGH-RSEAKDGINRTALRE 62
Query: 357 LYLLTSLRHENIIRLRGFCCSRG-RGECFLIYDFAPKGKLSKYLDQE---EGSSNVLDWS 412
+ LL L H NII G + G + L++DF D E + +S VL S
Sbjct: 63 IKLLQELSHPNII---GLLDAFGHKSNISLVFDFMET-------DLEVIIKDNSLVLTPS 112
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 472
+ ++ +G+ YLH I+HR+L +L+D+ +AD GL K
Sbjct: 113 HIKAYMLMTLQGLEYLHQH-----WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 167
Query: 473 FSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531
+ Y APE + R + D++A G I+ ++L L L + F
Sbjct: 168 -AYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 226
Query: 532 ENF 534
E
Sbjct: 227 ETL 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 33/223 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLT-----SL 363
+ +LG+G SSV + + T A++ I+VT S AE V+ L T L
Sbjct: 19 YEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 364 R----HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
R H NII+L+ FL++D KG+L YL ++ S + TR I+
Sbjct: 78 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLS---EKETR-KIMR 131
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH-KLLADDIVFSVLKT 478
+ + I LH K IVHR+L E +L+D N + D G +L + + SV T
Sbjct: 132 ALLEVICALH-----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGT 186
Query: 479 SAAMGYLAPEYVTTGR------FTERSDIFAFGVIILQILTGS 515
+ YLAPE + + + D+++ GVI+ +L GS
Sbjct: 187 PS---YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 66 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGYL 485
YLHS +V V+R++ +E +++D+ + I D GL K D + +KT YL
Sbjct: 120 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEYL 172
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGSL 516
APE + + D + GV++ +++ G L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 66 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGYL 485
YLHS +V V+R++ +E +++D+ + I D GL K D + +KT YL
Sbjct: 120 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYL 172
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGSL 516
APE + + D + GV++ +++ G L
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 69 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 122
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGYL 485
YLHS +V V+R++ +E +++D+ + I D GL K D + +KT YL
Sbjct: 123 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYL 175
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGSL 516
APE + + D + GV++ +++ G L
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYK-------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+CF + +LGKG + V++ T + + ++ + + A +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
++H I+ L + G+ +LI ++ G+L L++E + T + I
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEI 130
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL-LADDIVFSVLKTSA 480
+ +G+LH I++R+L E ++++ Q + + D GL K + D V
Sbjct: 131 SMALGHLHQK-----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF--CG 183
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
+ Y+APE + D ++ G ++ +LTG+ T R
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 111/252 (44%), Gaps = 34/252 (13%)
Query: 291 REHLNSFRLNLEEV-ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKS 348
R+ L +F ++V E F +++ LG GN V+K + + LV R I++ +
Sbjct: 6 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 65
Query: 349 EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS-- 406
+ ++ L +L I+ G F G++S ++ +G S
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYG--------------AFYSDGEISICMEHMDGGSLD 111
Query: 407 NVLDWSTRV------SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460
VL + R+ + I + KG+ YL K I+HR++ +L++ + + D
Sbjct: 112 QVLKKAGRIPEQILGKVSIAVIKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCD 167
Query: 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTS 520
G+ L D + S + T + Y++PE + ++ +SDI++ G+ ++++ G + S
Sbjct: 168 FGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
Query: 521 SMRLAAESATFE 532
+ A FE
Sbjct: 225 G---SGSMAIFE 233
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ F + LG+G++ SVYK ++ G +VAI+ + V +S+ E +K + ++ +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV---ESDLQEIIKEISIMQQCDSPH 85
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
+++ G + +++ ++ G +S + + L +I+ KG+ Y
Sbjct: 86 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEY 140
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---Y 484
LH +HR++ +L++ + + +AD G+ L D + K + +G +
Sbjct: 141 LHFMRK-----IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA----KRNXVIGTPFW 191
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
+APE + + +DI++ G+ +++ G
Sbjct: 192 MAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 31/234 (13%)
Query: 291 REHLNSFRLNLEEV-ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKS 348
R+ L +F ++V E F +++ LG GN V+K + + LV R I++ +
Sbjct: 49 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 108
Query: 349 EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS-- 406
+ ++ L +L I+ G F G++S ++ +G S
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGA--------------FYSDGEISICMEHMDGGSLD 154
Query: 407 NVLDWSTRV------SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460
VL + R+ + I + KG+ YL K I+HR++ +L++ + + D
Sbjct: 155 QVLKKAGRIPEQILGKVSIAVIKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCD 210
Query: 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
G+ L D + S + T + Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 211 FGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLT-----SL 363
+ +LG+G SSV + + T A++ I+VT S AE V+ L T L
Sbjct: 6 YEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 364 R----HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
R H NII+L+ FL++D KG+L YL ++ S + TR I+
Sbjct: 65 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLS---EKETR-KIMR 118
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 479
+ + I LH K IVHR+L E +L+D N + D G L D + +
Sbjct: 119 ALLEVICALH-----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVC 171
Query: 480 AAMGYLAPEYVTTGR------FTERSDIFAFGVIILQILTGS 515
YLAPE + + + D+++ GVI+ +L GS
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYK-------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLT 361
+CF + +LGKG + V++ T + + ++ + + A +L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 362 SLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGI 421
++H I+ L + G+ +LI ++ G+L L++E + T + I
Sbjct: 77 EVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEI 130
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL-LADDIVFSVLKTSA 480
+ +G+LH I++R+L E ++++ Q + + D GL K + D V
Sbjct: 131 SMALGHLHQK-----GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF--CG 183
Query: 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMR 523
+ Y+APE + D ++ G ++ +LTG+ T R
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 100
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + C + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 101 KL--YFCFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 154
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 155 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 31/235 (13%)
Query: 290 SREHLNSFRLNLEEV-ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCK 347
R+ L +F ++V E F +++ LG GN V+K + + LV R I++
Sbjct: 13 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP 72
Query: 348 SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS- 406
+ + ++ L +L I+ G F G++S ++ +G S
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGA--------------FYSDGEISICMEHMDGGSL 118
Query: 407 -NVLDWSTRV------SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 459
VL + R+ + I + KG+ YL K I+HR++ +L++ + +
Sbjct: 119 DQVLKKAGRIPEQILGKVSIAVIKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLC 174
Query: 460 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
D G+ L D + S + T + Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 175 DFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTL--VAIRSINVTSCKSEEAEFVKGLYLLT-----SL 363
+ +LG+G SSV + + T A++ I+VT S AE V+ L T L
Sbjct: 19 YEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 364 R----HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
R H NII+L+ FL++D KG+L YL ++ S + TR I+
Sbjct: 78 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLS---EKETR-KIMR 131
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 479
+ + I LH K IVHR+L E +L+D N + D G L D + +
Sbjct: 132 ALLEVICALH-----KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVC 184
Query: 480 AAMGYLAPEYVTTGR------FTERSDIFAFGVIILQILTGS 515
YLAPE + + + D+++ GVI+ +L GS
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFV--KGLYLLTSLRHENIIRLRG 373
LG+G+F V T + VA++ I+ K + + + L LRH +II+L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 374 FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV 433
+ + ++ ++A G+L Y+ +++ + D R I I Y H +
Sbjct: 77 VITTPT--DIVMVIEYA-GGELFDYIVEKKRMTE--DEGRR--FFQQIICAIEYCHRHK- 128
Query: 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS-AAMGYLAPEYVTT 492
IVHR+L E +L+D N IAD GL ++ D + LKTS + Y APE +
Sbjct: 129 ----IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVING 181
Query: 493 GRFT-ERSDIFAFGVIILQILTGSL 516
+ D+++ G+++ +L G L
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRL 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 14/206 (6%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINV-TSCKSEEAEFVKGLYLLTSLRHENI 368
F +V +G+G + VYK + G +VA++ I + T + + ++ + LL L H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
++L + + +L+++ + L ++D + L S + + +G+ +
Sbjct: 64 VKLLDVIHTENK--LYLVFEHVHQD-LKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
HS V +HR+L + +LI+ + +AD GL + V + + Y APE
Sbjct: 119 HSHRV-----LHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVVTLWYRAPE 172
Query: 489 YVTTGRFTERS-DIFAFGVIILQILT 513
+ ++ + DI++ G I +++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 294 LNSFRLNLEEVESATQCFSEVNLLGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKS- 348
+++FR E+VE + E LG G F+ V KGT ++ I+ ++S +
Sbjct: 2 MSTFRQ--EDVEDHYEMGEE---LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG 56
Query: 349 -EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSN 407
E + + +L +RH NII L + + LI + G+L +L ++E +
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTE 114
Query: 408 VLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKV-LIDQQF-NPLIA--DCGL 463
D +T+ + I G+ YLHS I H +L E + L+D+ NP I D G+
Sbjct: 115 --DEATQ--FLKQILDGVHYLHSKR-----IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 464 -HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGS 515
HK+ A + ++ T ++APE V +D+++ GVI +L+G+
Sbjct: 166 AHKIEAGNEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 66 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS +V V+R++ +E +++D+ + I D GL K D ++ YLA
Sbjct: 120 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSL 516
PE + + D + GV++ +++ G L
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 66 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS +V V+R++ +E +++D+ + I D GL K D ++ YLA
Sbjct: 120 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSL 516
PE + + D + GV++ +++ G L
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 66 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS +V V+R++ +E +++D+ + I D GL K D ++ YLA
Sbjct: 120 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 173
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSL 516
PE + + D + GV++ +++ G L
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 70 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 122
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 123 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + +R V K E A V +L + RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 71 FLTALKYAFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 124
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS +V V+R++ +E +++D+ + I D GL K D ++ YLA
Sbjct: 125 YLHSRDV-----VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLA 178
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSL 516
PE + + D + GV++ +++ G L
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 GH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 GH---RREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 72 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 124
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 125 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 103
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 160
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 161 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 212
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 166
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 167 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 218
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ +LI + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADS-GNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLA-AESATFENFIDRNLKGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T ++ A E+ I + + E +A L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR---HEGLSADLDA 252
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 253 VVLKALAKNPENR 265
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G + V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 166
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 167 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 218
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 45/232 (19%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEF----VKGLYLLTSLRH 365
+ ++ +G+G F V+K R G VA++ + + ++E+ F ++ + +L L+H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKH 76
Query: 366 ENIIRLRGFC------CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL---DWSTRVS 416
EN++ L C +R +G +L++DF + L+ L SNVL S
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL------SNVLVKFTLSEIKR 129
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ + G+ Y+H ++ I+HR++ VLI + +AD GL + FS+
Sbjct: 130 VMQMLLNGLYYIHRNK-----ILHRDMKAANVLITRDGVLKLADFGLAR------AFSLA 178
Query: 477 KTS---------AAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVL 518
K S + Y PE + R + D++ G I+ ++ T S ++
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ ++I + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL-KGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T + +S +++ + + E +A L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGD---SPDSVAYQHVREDPIPPSARHEGLSADLDA 252
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 253 VVLKALAKNPENR 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 80
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 137
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 138 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 189
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 111
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 168
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 169 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 220
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 144
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 145 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 196
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 154
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 211
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 212 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 263
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + ++ V K E A + +L + RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII-IGIAKGI 425
+ L+ + R CF++ ++A G+L +L +E S R I +
Sbjct: 212 FLTALKYSFQTHDRL-CFVM-EYANGGELFFHLSRERVFS-----EDRARFYGAEIVSAL 264
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGY 484
YLHS + +V+R+L +E +++D+ + I D GL K D + +KT Y
Sbjct: 265 DYLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEY 318
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
LAPE + + D + GV++ +++ G L
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 350
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 144
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 145 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 196
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + ++ V K E A + +L + RH
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSII-IGIAKGI 425
+ L+ + R CF++ ++A G+L +L +E S R I +
Sbjct: 209 FLTALKYSFQTHDRL-CFVM-EYANGGELFFHLSRERVFS-----EDRARFYGAEIVSAL 261
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-SAAMGY 484
YLHS + +V+R+L +E +++D+ + I D GL K D + +KT Y
Sbjct: 262 DYLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEY 315
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
LAPE + + D + GV++ +++ G L
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 83
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 140
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 141 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 192
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 94
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 151
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 152 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 203
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 184
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 113
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 170
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 171 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 222
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 88
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 145
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 146 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 197
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 15 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 127
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 128 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + AD++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 178 LARHTADEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 184
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 37/231 (16%)
Query: 299 LNLEEVESATQC--FSEVNLLGKGNFSSVYKG--TLRDGTLVAIRSINVTSCKSEEAEFV 354
+++ SAT + + LG+G + VYK T+ + T VAI+ I + E E V
Sbjct: 22 MSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIRL----EHEEEGV 76
Query: 355 KG-----LYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL 409
G + LL L+H NII L+ R LI+++A + L KY+D+
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKSVIHHNHR--LHLIFEYA-ENDLKKYMDKNP------ 127
Query: 410 DWSTRV--SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPL--IADCG 462
D S RV S + + G+ + HS +HR+L + +L+ D P+ I D G
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCHSRRC-----LHRDLKPQNLLLSVSDASETPVLKIGDFG 182
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQIL 512
L + I + Y PE + R ++ DI++ I ++L
Sbjct: 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 76
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 133
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 134 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 185
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 15 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 127
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 128 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + AD++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 178 LARHTADEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+ + Y+HS I HR++ + +L+D D + KL +++ +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLD-------PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 483 GYL------APEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
Y+ APE + +T D+++ G ++ ++L G +
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 15 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 127
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 128 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + AD++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 178 LARHTADEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 29/258 (11%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
+G+G + VYK +DG ++ + + LL L+H N+I L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 377 SRGRGECFLIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRV--SIIIGIAKGIGYLHSSE 432
S + +L++D+A + K+ + + + + S++ I GI YLH++
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 433 VNKPAIVHRNLSVEKVLI----DQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG----- 483
V +HR+L +L+ ++ IAD G +L S LK A +
Sbjct: 149 V-----LHRDLKPANILVMGEGPERGRVKIADMGFARLFN-----SPLKPLADLDPVVVT 198
Query: 484 --YLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMR-LAAESATFENFIDR-- 537
Y APE + R +T+ DI+A G I ++LT + + + + +DR
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 258
Query: 538 NLKGKFSESEAAKLGKMA 555
N+ G ++ + + KM
Sbjct: 259 NVMGFPADKDWEDIKKMP 276
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 79
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 136
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 137 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 188
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 45/232 (19%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEF----VKGLYLLTSLRH 365
+ ++ +G+G F V+K R G VA++ + + ++E+ F ++ + +L L+H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKH 76
Query: 366 ENIIRLRGFC------CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL---DWSTRVS 416
EN++ L C +R +G +L++DF + L+ L SNVL S
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL------SNVLVKFTLSEIKR 129
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ + G+ Y+H ++ I+HR++ VLI + +AD GL + FS+
Sbjct: 130 VMQMLLNGLYYIHRNK-----ILHRDMKAANVLITRDGVLKLADFGLAR------AFSLA 178
Query: 477 KTS---------AAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVL 518
K S + Y PE + R + D++ G I+ ++ T S ++
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSI-NVTSCKSEEAEFVKGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + + K+ E L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+ + Y+HS I HR++ + +L+D D + KL +++ +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLD-------PDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 483 GYL------APEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
Y+ APE + +T D+++ G ++ ++L G +
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSI-NVTSCKSEEAEFVKGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + + K+ E L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI---C 184
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 45/232 (19%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEF----VKGLYLLTSLRH 365
+ ++ +G+G F V+K R G VA++ + + ++E+ F ++ + +L L+H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKH 75
Query: 366 ENIIRLRGFC------CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL---DWSTRVS 416
EN++ L C +R +G +L++DF + L+ L SNVL S
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFC-EHDLAGLL------SNVLVKFTLSEIKR 128
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ + G+ Y+H ++ I+HR++ VLI + +AD GL + FS+
Sbjct: 129 VMQMLLNGLYYIHRNK-----ILHRDMKAANVLITRDGVLKLADFGLAR------AFSLA 177
Query: 477 KTS---------AAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVL 518
K S + Y PE + R + D++ G I+ ++ T S ++
Sbjct: 178 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 68 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 114 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 169 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 68 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 114 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 169 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 68 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 114 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 169 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 68 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 114 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 169 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 317 LGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKS--EEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V KGT ++ I+ ++S + E + + +L +RH NII
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E + D +T+ + I G+ YLHS
Sbjct: 73 LHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTE--DEATQ--FLKQILDGVHYLHS 126
Query: 431 SEVNKPAIVHRNLSVEKV-LIDQQF-NPLIA--DCGL-HKLLADDIVFSVLKTSAAMGYL 485
I H +L E + L+D+ NP I D G+ HK+ A + ++ T ++
Sbjct: 127 KR-----IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE---FV 178
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE V +D+++ GVI +L+G+
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGA 208
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 93
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 94 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + +A +G Y++
Sbjct: 148 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANAFVGTAQYVS 200
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSI-NVTSCKSEEAEFVKGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + + K+ E L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + E + L+ D+ P +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 184
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ ++I + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLA-AESATFENFIDRNLKGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T ++ A E+ I + + E +A L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR---HEGLSADLDA 252
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 253 VVLKALAKNPENR 265
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ ++I + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLA-AESATFENFIDRNLKGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T ++ A E+ I + + E +A L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR---HEGLSADLDA 252
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 253 VVLKALAKNPENR 265
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 68 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 113
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 114 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 168
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 169 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ ++I + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLA-AESATFENFIDRNLKGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T ++ A E+ I + + E +A L
Sbjct: 196 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR---HEGLSADLDA 252
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 253 VVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 438 IVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGR 494
I+HR++ ++I + D G+ + +AD SV +T+A +G YL+PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDS 212
Query: 495 FTERSDIFAFGVIILQILTGSLVLTSSMRLA-AESATFENFIDRNLKGKFSESEAAKLGK 553
RSD+++ G ++ ++LTG T ++ A E+ I + + E +A L
Sbjct: 213 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR---HEGLSADLDA 269
Query: 554 MALVCTHEDPENR 566
+ L ++PENR
Sbjct: 270 VVLKALAKNPENR 282
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 52/252 (20%)
Query: 348 SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL------SKYLDQ 401
SEE E LL +H NII L+ G+ +L+ + G+L K+ +
Sbjct: 68 SEEIEI-----LLRYGQHPNIITLKD-VYDDGK-HVYLVTELMRGGELLDKILRQKFFSE 120
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL-IDQQFNP---L 457
E S ++ I K + YLHS +VHR+L +L +D+ NP
Sbjct: 121 REASF----------VLHTIGKTVEYLHSQ-----GVVHRDLKPSNILYVDESGNPECLR 165
Query: 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLV 517
I D G K L + ++ ++APE + + E DI++ G+++ +L G
Sbjct: 166 ICDFGFAKQLRAENGL-LMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 518 LTSSMRLAAESATFENFIDRNLKGKF--------SESEAAK--LGKMALVCTHEDPENRP 567
+ S T E + R GKF + SE AK + KM H DP R
Sbjct: 225 FAN-----GPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML----HVDPHQRL 275
Query: 568 TMEAVIEELTVA 579
T + V++ V
Sbjct: 276 TAKQVLQHPWVT 287
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 52/252 (20%)
Query: 348 SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL------SKYLDQ 401
SEE E LL +H NII L+ G+ +L+ + G+L K+ +
Sbjct: 68 SEEIEI-----LLRYGQHPNIITLKD-VYDDGK-HVYLVTELMRGGELLDKILRQKFFSE 120
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL-IDQQFNP---L 457
E S ++ I K + YLHS +VHR+L +L +D+ NP
Sbjct: 121 REASF----------VLHTIGKTVEYLHSQ-----GVVHRDLKPSNILYVDESGNPECLR 165
Query: 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLV 517
I D G K L + ++ ++APE + + E DI++ G+++ +L G
Sbjct: 166 ICDFGFAKQLRAENGL-LMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 518 LTSSMRLAAESATFENFIDRNLKGKF--------SESEAAK--LGKMALVCTHEDPENRP 567
+ S T E + R GKF + SE AK + KM H DP R
Sbjct: 225 FAN-----GPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML----HVDPHQRL 275
Query: 568 TMEAVIEELTVA 579
T + V++ V
Sbjct: 276 TAKQVLQHPWVT 287
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + ++ V K E A + +L + RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 70 FLTALKYSFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 123
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG--- 483
YLHS + +V+R+L +E +++D+ + I D GL K +K A M
Sbjct: 124 YLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATMKXFC 171
Query: 484 ----YLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
YLAPE + + D + GV++ +++ G L
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + ++ V K E A + +L + RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 71 FLTALKYSFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 124
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG--- 483
YLHS + +V+R+L +E +++D+ + I D GL K +K A M
Sbjct: 125 YLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATMKXFC 172
Query: 484 ----YLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
YLAPE + + D + GV++ +++ G L
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F + LLGKG F V K T R + ++ V K E A + +L + RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
+ L+ + R CF++ ++A G+L +L +E V I +
Sbjct: 69 FLTALKYSFQTHDRL-CFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 122
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG--- 483
YLHS + +V+R+L +E +++D+ + I D GL K +K A M
Sbjct: 123 YLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATMKXFC 170
Query: 484 ----YLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516
YLAPE + + D + GV++ +++ G L
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYK------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V K G + R + E + + +L + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F +++ LG GN V+K + + LV R I++ + + ++ L +L I+
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 71 GFYG--------------AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 116
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
KG+ YL K I+HR++ +L++ + + D G+ L D++ + T +
Sbjct: 117 IKGLTYLR----EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS- 171
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y++PE + ++ +SDI++ G+ ++++ G
Sbjct: 172 --YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYK------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V K G + R + E + + +L + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYK------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V K G + R + E + + +L + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 28/245 (11%)
Query: 287 TGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTS 345
+GF R+ + + V + ++ +G G + +V R G VAI+ +
Sbjct: 9 SGFYRQEVTKTAWEVRAV------YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-YRP 61
Query: 346 CKSE--EAEFVKGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIYDFAP--KGKLSKYLD 400
+SE + L LL +RHEN+I L F + Y P L K +
Sbjct: 62 FQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK 121
Query: 401 QEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460
E+ + + + ++ + KG+ Y+H++ I+HR+L + +++ I D
Sbjct: 122 HEKLGEDRIQF-----LVYQMLKGLRYIHAA-----GIIHRDLKPGNLAVNEDCELKILD 171
Query: 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLT 519
GL + ++ V+ Y APE + R+T+ DI++ G I+ +++TG +
Sbjct: 172 FGLARQADSEMXGXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
Query: 520 SSMRL 524
S L
Sbjct: 228 GSDHL 232
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRS-INVTSCKSEEAEFVKGLYLLTSLRHENII 369
F ++ LG GN V K R L+ R I++ + + ++ L +L I+
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSS--NVLDWSTRV------SIIIGI 421
G F G++S ++ +G S VL + R+ + I +
Sbjct: 78 GFYGA--------------FYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
+G+ YL K I+HR++ +L++ + + D G+ L D + S + T +
Sbjct: 124 LRGLAYLR----EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS- 178
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y+APE + ++ +SDI++ G+ ++++ G
Sbjct: 179 --YMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 317 LGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKS--EEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V KGT ++ I+ + S + E + + +L +RH NII
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E + D +T+ + I G+ YLHS
Sbjct: 94 LHDIF--ENKTDVVLILELVSGGELFDFLAEKESLTE--DEATQ--FLKQILDGVHYLHS 147
Query: 431 SEVNKPAIVHRNLSVEKV-LIDQQF-NPLIA--DCGL-HKLLADDIVFSVLKTSAAMGYL 485
I H +L E + L+D+ NP I D G+ HK+ A + ++ T ++
Sbjct: 148 KR-----IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE---FV 199
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE V +D+++ GVI +L+G+
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGA 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENI 368
+++ ++G G+F VY+ L D G LVAI+ + ++ F + L ++ L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 369 IRLRGFCCSRGRGECF----LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
+RLR F S G + L+ D+ P+ +++++ + + + V+ + +
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL---YMYQLF 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSVLKTSA 480
+ + Y+HS I HR++ + +L+D L + D G K L+ + S +
Sbjct: 133 RSLAYIHSF-----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI---C 184
Query: 481 AMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVL 518
+ Y APE + +T D+++ G ++ ++L G +
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 24/246 (9%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSIN---VTSCKSEEAEFVKGLYLLTSLRHE 366
F + ++GKG+F V + + A++ + + K E+ + LL +++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
++ L + + + + D+ G+L +L +E L+ R IA +G
Sbjct: 100 FLVGLH--FSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARF-YAAEIASALG 153
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAMGY 484
YLHS IV+R+L E +L+D Q + ++ D GL K ++I + ++ Y
Sbjct: 154 YLHSLN-----IVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEY 205
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
LAPE + + D + G ++ ++L G S R AE ++N +++ L+ K +
Sbjct: 206 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--RNTAE--MYDNILNKPLQLKPN 261
Query: 545 ESEAAK 550
+ +A+
Sbjct: 262 ITNSAR 267
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYK------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V K G + R + E + + +L + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 16/207 (7%)
Query: 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
V LG+G V R VA++ +++ K + + L HEN+++
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 373 GFCCSRGRGEC-FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
G R G +L ++ G+L ++ + G + G+ YLH
Sbjct: 71 G---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPE----PDAQRFFHQLMAGVVYLHGI 123
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL-KTSAAMGYLAPEYV 490
I HR++ E +L+D++ N I+D GL + + +L K + Y+APE +
Sbjct: 124 -----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 491 TTGRF-TERSDIFAFGVIILQILTGSL 516
F E D+++ G+++ +L G L
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDAG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYK------GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
LG G F+ V K G + R + E + + +L + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 288 GFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTS 345
G S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 346 CKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLD 400
A+ + L LL ++HEN+I L F +R E +L+ L+ +
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK 129
Query: 401 QEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460
++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D
Sbjct: 130 CQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILD 179
Query: 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 180 FGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS 405
A+ + L LL ++HEN+I L F +R E +Y + L+ S
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKS 119
Query: 406 SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465
+ D + +I I +G+ Y+HS++ I+HR+L + +++ I D GL +
Sbjct: 120 QKLTDDHVQF-LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFGLCR 173
Query: 466 LLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 174 HTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGXV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 13 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 125
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 126 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELKILDFG 175
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 176 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 96
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 97 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 150
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + ++ +G Y++
Sbjct: 151 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVS 203
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 30 IFQIQLKVILLCFVV-LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLG 88
IF I + F+ L L N LT +PA+I +L +L VL L HNRL +P LG+
Sbjct: 236 IFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293
Query: 89 KLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTL 124
+LK F+++ T+P N L FL V+ N L
Sbjct: 294 QLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEGNPL 328
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 286 GTGFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINV 343
G+ S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 17 GSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR 76
Query: 344 TSCKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKY 398
A+ + L LL ++HEN+I L F +R E +L+ L+
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNI 135
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ ++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I
Sbjct: 136 VKCQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKI 185
Query: 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 186 LDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 286 GTGFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINV 343
G+ S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR 77
Query: 344 TSCKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKY 398
A+ + L LL ++HEN+I L F +R E +L+ L+
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNI 136
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ ++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I
Sbjct: 137 VKCQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKI 186
Query: 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 187 LDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 286 GTGFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINV 343
G+ S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR 77
Query: 344 TSCKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKY 398
A+ + L LL ++HEN+I L F +R E +L+ L+
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNI 136
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ ++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I
Sbjct: 137 VKCQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKI 186
Query: 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 187 LDFGLARHTDDEMXGXV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ + V LG G F VYK ++ G L A + I T + E +++ + +L + H
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPY 69
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSK-YLDQEEGSSNVLDWSTRVSIII-GIAKGI 425
I++L G G+ +++ +F P G + L+ + G + ++ ++ + + +
Sbjct: 70 IVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTE-----PQIQVVCRQMLEAL 122
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG-- 483
+LHS I+HR+L VL+ + + +AD G ++ + ++ K + +G
Sbjct: 123 NFLHSKR-----IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDSFIGTP 173
Query: 484 -YLAPEYVTTGRFTE-----RSDIFAFGVIILQI 511
++APE V + ++DI++ G+ ++++
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 286 GTGFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINV 343
G+ S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 18 GSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR 77
Query: 344 TSCKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKY 398
A+ + L LL ++HEN+I L F +R E +L+ L+
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNI 136
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ ++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I
Sbjct: 137 VKCQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKI 186
Query: 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 187 LDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 286 GTGFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINV 343
G+ S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 17 GSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR 76
Query: 344 TSCKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKY 398
A+ + L LL ++HEN+I L F +R E +L+ L+
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNI 135
Query: 399 LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLI 458
+ ++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I
Sbjct: 136 VKCQKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKI 185
Query: 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 186 LDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 92
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 93 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 146
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + ++ +G Y++
Sbjct: 147 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVS 199
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 107/234 (45%), Gaps = 21/234 (8%)
Query: 288 GFSREHLNSFRLNLEE-VESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTS 345
G S+E +R L + + + + ++ +G G + SV + G VA++ ++
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 346 CKSEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIY--DFAPKGKLSKYLDQ 401
A+ + L LL ++HEN+I L F +R E +Y L+ +
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 402 EEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461
++ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D
Sbjct: 131 QKLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDF 180
Query: 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 181 GLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 4 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 57
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 116
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 117 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 166
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 167 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 150 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 202
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 45/232 (19%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEF----VKGLYLLTSLRH 365
+ ++ +G+G F V+K R G VA++ + + ++E+ F ++ + +L L+H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKH 76
Query: 366 ENIIRLRGFC------CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVL---DWSTRVS 416
EN++ L C +R + +L++DF + L+ L SNVL S
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLL------SNVLVKFTLSEIKR 129
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
++ + G+ Y+H ++ I+HR++ VLI + +AD GL + FS+
Sbjct: 130 VMQMLLNGLYYIHRNK-----ILHRDMKAANVLITRDGVLKLADFGLAR------AFSLA 178
Query: 477 KTS---------AAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVL 518
K S + Y PE + R + D++ G I+ ++ T S ++
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG+G+FS K + I ++ + + L L H NI++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVF- 75
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII-GIAKGIGYLHSSEVNK 435
+ FL+ + G+L + + +++ S T S I+ + + ++H
Sbjct: 76 -HDQLHTFLVMELLNGGELFERIKKKKHFS-----ETEASYIMRKLVSAVSHMHDV---- 125
Query: 436 PAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSA-AMGYLAPEYVT 491
+VHR+L E +L + + L I D G +L D LKT + Y APE +
Sbjct: 126 -GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLN 182
Query: 492 TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS-ESEAAK 550
+ E D+++ GVI+ +L+G + S R ++ E + + KG FS E EA K
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDFSFEGEAWK 241
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 4 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 116
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 117 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 166
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 167 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDYG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 13 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 125
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 126 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 175
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 176 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 32/226 (14%)
Query: 311 FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F + LG+G F V++ + D AI+ I + + + + ++ + L L H I+
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDW------------STRVSI 417
R + E + +PK L + Q N+ DW S + I
Sbjct: 67 RYFNAWLEKNTTE--KLQPSSPKVYLYIQM-QLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL-ADDIVFSVL 476
+ IA+ + +LHS ++HR+L + + D GL + D+ +VL
Sbjct: 124 FLQIAEAVEFLHSK-----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 477 KTSAAMG----------YLAPEYVTTGRFTERSDIFAFGVIILQIL 512
A Y++PE + ++ + DIF+ G+I+ ++L
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 10 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 122
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 123 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFG 172
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 173 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 10 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 122
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 123 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 173 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 6 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 59
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 60 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 118
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 119 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 168
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 169 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 10 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 122
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 123 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 173 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ + V LG G F VYK ++ G L A + I T + E +++ + +L + H
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE-TKSEEELEDYIVEIEILATCDHPY 77
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSK-YLDQEEGSSNVLDWSTRVSIII-GIAKGI 425
I++L G G+ +++ +F P G + L+ + G + ++ ++ + + +
Sbjct: 78 IVKLLGAYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTE-----PQIQVVCRQMLEAL 130
Query: 426 GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG-- 483
+LHS I+HR+L VL+ + + +AD G ++ + ++ K + +G
Sbjct: 131 NFLHSKR-----IIHRDLKAGNVLMTLEGDIRLADFG----VSAKNLKTLQKRDSFIGTP 181
Query: 484 -YLAPEYVTTGRFTE-----RSDIFAFGVIILQI 511
++APE V + ++DI++ G+ ++++
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTS 362
+S Q F E LGKG FS V + + G A + IN + + + + +
Sbjct: 21 QSMYQLFEE---LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL 77
Query: 363 LRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIA 422
L+H NI+RL G +LI+D G+L + + E S D S + I+
Sbjct: 78 LKHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEA-DASHCIQQILE-- 132
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTS 479
LH ++ +VHR+L E +L+ + +AD GL + + + +
Sbjct: 133 ---AVLHCHQM---GVVHRDLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFA 185
Query: 480 AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
GYL+PE + + + D++A GVI+ +L G
Sbjct: 186 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 38/238 (15%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S + G G + SV + G VA++ ++
Sbjct: 13 FYRQELNK---TIWEVPERYQNLSPI---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIY--------DFAPKGKLSK 397
A+ + L LL ++HEN+I L F +R E +Y D K K
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 398 YLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457
D +I I +G+ Y+HS++ I+HR+L + +++
Sbjct: 127 LTDDHVQF-----------LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDXELK 170
Query: 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
I D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 ILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 5 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 58
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 59 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 117
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 118 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 167
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 168 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 15 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 127
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 128 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 177
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 178 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKGIGYLHSSEVNKPAIVHRNL 443
LI D+ G+L +L Q E + V I +G I + +LH K I++R++
Sbjct: 136 LILDYINGGELFTHLSQRERFTE-----HEVQIYVGEIVLALEHLH-----KLGIIYRDI 185
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDI 501
+E +L+D + ++ D GL K D + Y+AP+ V G + D
Sbjct: 186 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 245
Query: 502 FAFGVIILQILTGS 515
++ GV++ ++LTG+
Sbjct: 246 WSLGVLMYELLTGA 259
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 14 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 67
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 68 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 126
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 127 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 177 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHEN 367
F + +GKG+F V D + A++ +N C ++E K L ++ L H
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII-GIAKGIG 426
++ L + + + F++ D G L +L Q NV V + I + +
Sbjct: 77 LVNL--WYSFQDEEDMFMVVDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALD 129
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YL + I+HR++ + +L+D+ + I D + +L + + + + Y+A
Sbjct: 130 YLQNQR-----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM--AGTKPYMA 182
Query: 487 PEYVTTGR---FTERSDIFAFGVIILQILTG 514
PE ++ + ++ D ++ GV ++L G
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 5 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 58
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 59 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 117
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 118 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 167
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 168 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 73
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 74 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 127
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 128 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 180
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 20 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSKPFQS 73
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 132
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 133 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 183 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 14 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 67
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 68 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 126
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 127 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDSELKILDFG 176
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 177 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 150 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 202
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 31 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 84
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 85 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 143
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 144 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 193
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 194 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 13 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 125
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 126 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 175
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 176 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 7 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 60
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 61 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 119
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 120 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 169
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 170 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 20 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 73
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 132
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 133 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 183 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 96
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 97 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 150
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 151 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 203
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 20 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 73
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 132
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 133 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 182
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 183 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 72
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 73 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 126
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 127 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 179
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 10 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 122
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 123 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 172
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 173 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAIR I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 77
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 78 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 131
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 132 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 184
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDGG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 71
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 72 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 125
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 126 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 178
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 70
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 71 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 124
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 125 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 177
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 150 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 202
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 93
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 94 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 148 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 200
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 98
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 99 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 152
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 153 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 205
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 93
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 94 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 147
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 148 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 200
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 14 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 67
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 68 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 126
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 127 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 177 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 150 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 202
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 95
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 150 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 202
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDRG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 14 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 67
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 68 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 126
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 127 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 176
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 177 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I + YLH I+HR+L E +L+++ + I D G K+L+ + + ++
Sbjct: 141 IVSALEYLHGK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANS 193
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+G Y++PE +T ++ SD++A G II Q++ G
Sbjct: 194 FVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 23/208 (11%)
Query: 315 NLLGKGNFSSVYKG----TLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSLRHENII 369
+LG+G+FS+V T R+ + + ++ K + +V + +++ L H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFV 92
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
+L + + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 93 KL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLH 146
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++
Sbjct: 147 GK-----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVS 199
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE +T + SD++A G II Q++ G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 31 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 84
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIY--DFAPKGKLSKYLDQEE 403
A+ + L LL ++HEN+I L F +R E +Y L+ + ++
Sbjct: 85 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 144
Query: 404 GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463
+ + + + +I I +G+ Y+HS++ I+HR+L + +++ I D GL
Sbjct: 145 LTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGL 194
Query: 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
+ D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 195 ARHTDDEMXGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRDGTL-VAIRSINVTSCKSEEAE-FVKGLYLLTSLRHE 366
Q F E LGKG FS V + + T A + IN + + + + + L+H
Sbjct: 34 QLFEE---LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL G +L++D G+L + + E S + I I + +
Sbjct: 91 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSE----ADASHCIHQILESVN 144
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMG 483
++H + IVHR+L E +L+ + +AD GL + + + G
Sbjct: 145 HIHQHD-----IVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQAWFGFAGTPG 198
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
YL+PE + + + DI+A GVI+ +L G
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 317 LGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G + SV K + G ++A++ I T + E+ + + L ++ +R + + F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFY 87
Query: 376 CSRGR-GECFLIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE 432
+ R G+C++ + K KY+ +V+ I + K + +L +
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYV--YSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492
I+HR++ +L+D+ N + D G+ L D I + + + Y+APE +
Sbjct: 146 ----KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT--RDAGCRPYMAPERIDP 199
Query: 493 GR----FTERSDIFAFGVIILQILTG 514
+ RSD+++ G+ + ++ TG
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATG 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 24/245 (9%)
Query: 311 FSEVNLLGKGNFSSVY----KGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366
F+ + +LGKG+F V KGT + ++ V E V+ L +
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ--EEGSSNVLDWSTRVSIIIGIAKG 424
+ +L C + + + ++ G L ++ Q + + ++ +SI G
Sbjct: 81 FLTQLHS--CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------G 132
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGY 484
+ +LH K I++R+L ++ V++D + + IAD G+ K D V + + Y
Sbjct: 133 LFFLH-----KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGTPDY 186
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
+APE + + + D +A+GV++ ++L G E F++ ++ N+ S
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE----DEDELFQSIMEHNVSYPKS 242
Query: 545 ESEAA 549
S+ A
Sbjct: 243 LSKEA 247
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 4 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 116
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 117 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 166
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 167 LARHTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
++++ IV+R+L E +L+D + I+D GL + + ++ +GY+APE V
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVV 357
Query: 491 TTGRFTERSDIFAFGVIILQILTGS 515
R+T D +A G ++ +++ G
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
++++ IV+R+L E +L+D + I+D GL + + ++ +GY+APE V
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVV 357
Query: 491 TTGRFTERSDIFAFGVIILQILTGS 515
R+T D +A G ++ +++ G
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 136
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 137 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L + RHEN
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 138
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 139 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L + RHEN
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 138
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 139 LKYIHSANV-----LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I ++ E + + +L + H NII
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L R + LI + G+L +L Q+E S S I I G+ YLH+
Sbjct: 80 LHD--VYENRTDVVLILELVSGGELFDFLAQKESLSE----EEATSFIKQILDGVNYLHT 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADDIVFSVLKTSAAMGYLA 486
+ I H +L E +++ + P+ + D GL + D + F + + ++A
Sbjct: 134 KK-----IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVA 186
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGS 515
PE V +D+++ GVI +L+G+
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGA 215
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 136
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 137 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 315 NLLGKGNFSS-VYKGTLRDGTLVAIRSINVTSC-KSEEAEFV-KGLYLLTSLRHENIIRL 371
+LG+G+FS+ V L AI+ + K + +V + +++ L H ++L
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+ + + + +A G+L KY+ ++ GS D + I + YLH
Sbjct: 96 --YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGS---FDETCTRFYTAEIVSALEYLHGK 149
Query: 432 EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPE 488
I+HR+L E +L+++ + I D G K+L+ + + + +G Y++PE
Sbjct: 150 -----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPE 202
Query: 489 YVTTGRFTERSDIFAFGVIILQILTG 514
+T + SD++A G II Q++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 28/206 (13%)
Query: 317 LGKGNFSSVY----KGTLRDGTL-VAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL 371
LG+G S VY KGT + L V ++++ ++E + +L L H NII+L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTE-------IGVLLRLSHPNIIKL 113
Query: 372 RGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS 431
+ E L+ + G+L + E+G + D + V I+ + + YLH +
Sbjct: 114 KEIF--ETPTEISLVLELVTGGELFDRI-VEKGYYSERDAADAVKQIL---EAVAYLHEN 167
Query: 432 EVNKPAIVHRNLSVEKVLIDQQF--NPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAPE 488
IVHR+L E +L PL IAD GL K++ ++ + GY APE
Sbjct: 168 -----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV--CGTPGYCAPE 220
Query: 489 YVTTGRFTERSDIFAFGVIILQILTG 514
+ + D+++ G+I +L G
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 136
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 137 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
IA G+ +L S I++R+L ++ V++D + + IAD G+ K + ++ + T
Sbjct: 451 IAIGLFFLQSK-----GIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKX 501
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE + + + D +AFGV++ ++L G E F++ ++
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE----DEDELFQSIMEH 557
Query: 538 NLKGKFSESEAA 549
N+ S S+ A
Sbjct: 558 NVAYPKSMSKEA 569
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q + V G G + SV + G VA++ ++
Sbjct: 18 FYRQELNK---TIWEVPERYQNLAPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 71
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 72 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 130
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D G
Sbjct: 131 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFG 180
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 181 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
IA G+ +L S I++R+L ++ V++D + + IAD G+ K + ++ + T
Sbjct: 130 IAIGLFFLQSK-----GIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKX 180
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE + + + D +AFGV++ ++L G E F++ ++
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE----DEDELFQSIMEH 236
Query: 538 NLKGKFSESEAA 549
N+ S S+ A
Sbjct: 237 NVAYPKSMSKEA 248
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 136
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 137 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHE 366
Q F E LGKG FS V + + G A IN + + + + + L+H
Sbjct: 14 QLFEE---LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL G +LI+D G+L + + E S D S + I+
Sbjct: 71 NIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEA-DASHCIQQILE-----A 122
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMG 483
LH ++ +VHRNL E +L+ + +AD GL + + + + G
Sbjct: 123 VLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGTPG 178
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
YL+PE + + + D++A GVI+ +L G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 138
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 139 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 156
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 157 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
++ +G+G +VY + G VAIR +N+ +E + + ++ ++ NI+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIV 81
Query: 370 R-LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L + E +++ ++ G L+ + + +D ++ + + +L
Sbjct: 82 NYLDSYLVG---DELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFL 133
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
HS++V +HRN+ + +L+ + + D G I K S +G ++
Sbjct: 134 HSNQV-----IHRNIKSDNILLGMDGSVKLTDFGF----CAQITPEQSKRSTMVGTPYWM 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE VT + + DI++ G++ ++++ G
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 144
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 145 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 136
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 137 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSV 475
+ + I K + YL K ++HR++ +L+D++ + D G+ L DD
Sbjct: 128 KMTVAIVKALYYLK----EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD- 182
Query: 476 LKTSAAMGYLAPEYV-----TTGRFTERSDIFAFGVIILQILTGSL 516
+++ Y+APE + T + R+D+++ G+ ++++ TG
Sbjct: 183 -RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 141
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 142 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 142
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 143 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 133
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 134 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS--VLKTSAAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + + + A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 141
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS--VLKTSAAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + + + A
Sbjct: 142 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 134
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 135 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICY-----FLYQILRG 134
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 135 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG+G + V K + G ++A++ I T E+ + L + S+R + F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 72
Query: 376 CSRGR-GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ R G+ ++ + L K+ Q + I + I K + +LHS
Sbjct: 73 GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---- 127
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-- 492
K +++HR++ VLI+ + D G+ L DD+ + + Y+APE +
Sbjct: 128 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI--DAGCKPYMAPERINPEL 185
Query: 493 --GRFTERSDIFAFGVIILQI 511
++ +SDI++ G+ ++++
Sbjct: 186 NQKGYSVKSDIWSLGITMIEL 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSIN 342
+ GF ++ +N L + + +G G + SV R G VAI+ ++
Sbjct: 23 IRKKGFYKQDVNKTAWEL------PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS 76
Query: 343 VTSCKSE--EAEFVKGLYLLTSLRHENIIRLRGFCCS----RGRGECFLIYDFAPKGKLS 396
+SE + L LL ++HEN+I L R + +L+ F + L
Sbjct: 77 -RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQ 134
Query: 397 KYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
K + E + ++ + KG+ Y+HS+ +VHR+L + +++
Sbjct: 135 KIMGMEFSEEKI------QYLVYQMLKGLKYIHSA-----GVVHRDLKPGNLAVNEDCEL 183
Query: 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGS 515
I D GL + ++ V+ Y APE + + + + DI++ G I+ ++LTG
Sbjct: 184 KILDFGLARHADAEMTGYVV----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYK-GTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHE 366
Q F E LGKG FS V + + G A + IN + + + + + L+H
Sbjct: 7 QLFEE---LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL G +L++D G+L + + E S + I I + +
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSE----ADASHCIQQILESVN 117
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMG 483
+ H + IVHR+L E +L+ + +AD GL + D + + G
Sbjct: 118 HCHLN-----GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPG 171
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
YL+PE + + + D++A GVI+ +L G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYK-GTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHE 366
Q F E LGKG FS V + + G A + IN + + + + + L+H
Sbjct: 7 QLFEE---LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG 426
NI+RL G +L++D G+L + + E S + I I + +
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSE----ADASHCIQQILESVN 117
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMG 483
+ H + IVHR+L E +L+ + +AD GL + D + + G
Sbjct: 118 HCHLN-----GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPG 171
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
YL+PE + + + D++A GVI+ +L G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + ++ +HEN++ + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 88
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 139
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 140 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 194
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAK 550
+ DI++ G+++++++ G + L A +N R NL K S S
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH-KVSPSLKGF 253
Query: 551 LGKMALVCTHEDPENRPT 568
L ++ + DP R T
Sbjct: 254 LDRLLV----RDPAQRAT 267
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + ++ +HEN++ + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 84
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 135
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 136 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 190
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAK 550
+ DI++ G+++++++ G + L A +N R NL K S S
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH-KVSPSLKGF 249
Query: 551 LGKMALVCTHEDPENRPT 568
L ++ + DP R T
Sbjct: 250 LDRLLV----RDPAQRAT 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + ++ +HEN++ + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 95
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 146
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 147 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 201
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAK 550
+ DI++ G+++++++ G + L A +N R NL K S S
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH-KVSPSLKGF 260
Query: 551 LGKMALVCTHEDPENRPT 568
L ++ + DP R T
Sbjct: 261 LDRLLV----RDPAQRAT 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + ++ +HEN++ + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--YN 93
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 144
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 145 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 199
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--NLKGKFSESEAAK 550
+ DI++ G+++++++ G + L A +N R NL K S S
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH-KVSPSLKGF 258
Query: 551 LGKMALVCTHEDPENRPT 568
L ++ + DP R T
Sbjct: 259 LDRLLV----RDPAQRAT 272
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/225 (16%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + + ++ +HEN++ + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE-VVIMRDYQHENVVEM--YN 138
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 189
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 190 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 244
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
+ DI++ G+++++++ G + L A +N R
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 289
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 101/223 (45%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +++ D + L K L + S++ + + + I +G
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICY-----FLYQILRG 140
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 141 LKYIHSANV-----LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 38/238 (15%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ L + EV Q S V G G + SV + G VA++ ++
Sbjct: 4 FYRQELAK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGECFLIY--------DFAPKGKLSK 397
A+ + L LL ++HEN+I L F +R E +Y D K +K
Sbjct: 58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 398 YLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457
D +I I +G+ Y+HS++ I+HR+L + +++
Sbjct: 118 LTDDHVQF-----------LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELK 161
Query: 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
I D GL + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 162 ILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/225 (16%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
+G+G+ V T+R G LVA++ +++ + E F + + ++ +HEN++ + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE-VVIMRDYQHENVVEM--YN 215
Query: 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435
E +++ +F G L+ + + + ++ + + + + LH+
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---- 266
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
++HR++ + +L+ ++D G ++ + V + +G ++APE ++
Sbjct: 267 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE----VPRRKXLVGTPYWMAPELISR 321
Query: 493 GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
+ DI++ G+++++++ G + L A +N R
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR 366
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
++ +G+G +VY + G VAIR +N+ +E + + ++ ++ NI+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIV 80
Query: 370 R-LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L + E +++ ++ G L+ + + +D ++ + + +L
Sbjct: 81 NYLDSYLVG---DELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFL 132
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
HS++V +HR++ + +L+ + + D G I K S +G ++
Sbjct: 133 HSNQV-----IHRDIKSDNILLGMDGSVKLTDFGF----CAQITPEQSKRSTMVGTPYWM 183
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE VT + + DI++ G++ ++++ G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
++ +G+G +VY + G VAIR +N+ +E + + ++ ++ NI+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIV 80
Query: 370 R-LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L + E +++ ++ G L+ + + +D ++ + + +L
Sbjct: 81 NYLDSYLVG---DELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFL 132
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
HS++V +HR++ + +L+ + + D G I K S +G ++
Sbjct: 133 HSNQV-----IHRDIKSDNILLGMDGSVKLTDFGF----CAQITPEQSKRSXMVGTPYWM 183
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE VT + + DI++ G++ ++++ G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 118 YMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 168
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E +LIDQQ +AD G K + YLAPE + + + + D +A
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS 348
F R+ LN + EV Q S V G+ S Y ++ G +A++ ++
Sbjct: 37 FYRQELNK---TIWEVPERYQTLSPVGSGAYGSVCSSYD--VKSGLKIAVKKLSRPFQSI 91
Query: 349 EEAEFV-KGLYLLTSLRHENIIRLRGFCCSRGRGECF---LIYDFAPKGKLSKYLDQEEG 404
A+ + L LL ++HEN+I L E F + L+ + ++
Sbjct: 92 IHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKL 151
Query: 405 SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464
+ + + + +I I +G+ Y+HS++ I+HR+L + +++ I D GL
Sbjct: 152 TDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFGLA 201
Query: 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
+ D++ V A Y APE + + DI++ G I+ ++LTG
Sbjct: 202 RHTDDEMTGYV----ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 311 FSEVNLLGKGNFS---SVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
++ ++ +G+G + S Y + VAI+ I+ ++ ++ + +L RHEN
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 368 IIRLRGFCCS---RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
II + + + +L+ L K L + S++ + + + I +G
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQHLSNDHICY-----FLYQILRG 156
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS--AAM 482
+ Y+HS+ V +HR+L +L++ + I D GL ++ D + T A
Sbjct: 157 LKYIHSANV-----LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 483 GYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRL 524
Y APE + + +T+ DI++ G I+ ++L+ + L
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
++ +G+G +VY + G VAIR +N+ +E + + ++ ++ NI+
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIV 81
Query: 370 R-LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L + E +++ ++ G L+ + + +D ++ + + +L
Sbjct: 82 NYLDSYLVG---DELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFL 133
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
HS++V +HR++ + +L+ + + D G I K S +G ++
Sbjct: 134 HSNQV-----IHRDIKSDNILLGMDGSVKLTDFGF----CAQITPEQSKRSXMVGTPYWM 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE VT + + DI++ G++ ++++ G
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 30/276 (10%)
Query: 311 FSEVNLLGKGNFSS-VYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
F ++LG G + VY+G D VA++ I + C S V+ L S H N+I
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRI-LPECFSFADREVQ--LLRESDEHPNVI 81
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
R FC + R ++ + L +Y++Q++ + L+ ++++ G+ +LH
Sbjct: 82 RY--FCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLE---PITLLQQTTSGLAHLH 135
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQ-----QFNPLIADCGLHKLLA-DDIVFSVLK-TSAAM 482
S IVHR+L +LI + +I+D GL K LA FS
Sbjct: 136 SLN-----IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 483 GYLAPEYVTTG---RFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRN 538
G++APE ++ T DIF+ G + +++ GS S++ A +D
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL 250
Query: 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
K + A +L + + DP+ RP+ + V++
Sbjct: 251 HPEKHEDVIARELIEKMIAM---DPQKRPSAKHVLK 283
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 311 FSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
++ +G+G +VY + G VAIR +N+ +E + + ++ ++ NI+
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIV 80
Query: 370 R-LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428
L + E +++ ++ G L+ + + +D ++ + + +L
Sbjct: 81 NYLDSYLVG---DELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFL 132
Query: 429 HSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YL 485
HS++V +HR++ + +L+ + + D G I K S +G ++
Sbjct: 133 HSNQV-----IHRDIKSDNILLGMDGSVKLTDFGF----CAQITPEQSKRSEMVGTPYWM 183
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE VT + + DI++ G++ ++++ G
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I G
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILGFG 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 28/233 (12%)
Query: 289 FSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSINVTSCK 347
F R+ LN + EV Q S V G G + SV + G VA++ ++
Sbjct: 8 FYRQELNK---TIWEVPERYQNLSPV---GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 348 SEEAEFV-KGLYLLTSLRHENIIRLRG-FCCSRGRGE---CFLIYDFAPKGKLSKYLDQE 402
A+ + L LL ++HEN+I L F +R E +L+ L+ + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ 120
Query: 403 EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462
+ + + + + +I I +G+ Y+HS++ I+HR+L + +++ I D
Sbjct: 121 KLTDDHVQF-----LIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDFY 170
Query: 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
L + D++ V A Y APE + + + DI++ G I+ ++LTG
Sbjct: 171 LARHTDDEMTGYV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ +AD G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ +AD G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ +AD G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYL-----LTSLR 364
+ ++ +G+G++ V+K RD G +VAI+ +SE+ +K + L L L+
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQLK 60
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H N++ L R + L++++ L + + G L SI +
Sbjct: 61 HPNLVNL--LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL----VKSITWQTLQA 114
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA------DDIVFSVLKT 478
+ + H K +HR++ E +LI + + D G +LL DD V
Sbjct: 115 VNFCH-----KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV------ 163
Query: 479 SAAMGYLAPE-YVTTGRFTERSDIFAFGVIILQILTG 514
A Y +PE V ++ D++A G + ++L+G
Sbjct: 164 -ATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 47/237 (19%)
Query: 359 LLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL------SKYLDQEEGSSNVLDWS 412
LL +H NII L+ G+ +++ + G+L K+ + E S+
Sbjct: 69 LLRYGQHPNIITLKD-VYDDGK-YVYVVTELMKGGELLDKILRQKFFSEREASA------ 120
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL-IDQQFNP---LIADCGLHKLLA 468
++ I K + YLH+ +VHR+L +L +D+ NP I D G K L
Sbjct: 121 ----VLFTITKTVEYLHAQ-----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528
+ ++ ++APE + + DI++ GV++ +LTG +
Sbjct: 172 AENGL-LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN-----GPD 225
Query: 529 ATFENFIDRNLKGKF--------SESEAAK--LGKMALVCTHEDPENRPTMEAVIEE 575
T E + R GKF S S+ AK + KM H DP R T V+
Sbjct: 226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKM----LHVDPHQRLTAALVLRH 278
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I Q+ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGF 374
+GKG FS V + L G A + IN + + + + + L+H NI+RL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
G +L++D G+L + + E S D S + I+ LH ++
Sbjct: 72 ISEEGFH--YLVFDLVTGGELFEDIVAREYYSEA-DASHCIQQILE-----AVLHCHQM- 122
Query: 435 KPAIVHRNLSVEKVLIDQQFNPL---IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT 491
+VHR+L E +L+ + +AD GL + D + + GYL+PE +
Sbjct: 123 --GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLR 179
Query: 492 TGRFTERSDIFAFGVIILQILTG 514
+ + DI+A GVI+ +L G
Sbjct: 180 KEAYGKPVDIWACGVILYILLVG 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 317 LGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375
LG+G + V K + G ++A++ I T E+ + L + S+R + F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 116
Query: 376 CSRGR-GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVN 434
+ R G+ ++ + L K+ Q + I + I K + +LHS
Sbjct: 117 GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---- 171
Query: 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-- 492
K +++HR++ VLI+ + D G+ L D + ++ + Y+APE +
Sbjct: 172 KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI--DAGCKPYMAPERINPEL 229
Query: 493 --GRFTERSDIFAFGVIILQI 511
++ +SDI++ G+ ++++
Sbjct: 230 NQKGYSVKSDIWSLGITMIEL 250
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLAGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 167
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D GL K + YLAPE + + + + D +A
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 167
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D GL K + YLAPE + + + + D +A
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
FS ++G+G F VY D G + A++ ++ K ++ E T +E I+
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE--------TLALNERIM 242
Query: 370 RLRGFCCSRGRGECFLI----YDFAPKGKLSKYLDQEEG--------SSNVLDWSTRVSI 417
G+C I Y F KLS LD G V +
Sbjct: 243 -----LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
I G+ ++H+ +V+R+L +L+D+ + I+D G LA D FS K
Sbjct: 298 AAEIILGLEHMHNR-----FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKK 346
Query: 478 TSAAM---GYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
A++ GY+APE + G + +D F+ G ++ ++L G
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
FS ++G+G F VY D G + A++ ++ K ++ E + +L ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL-------ALNERIML 243
Query: 370 RLRGFCCSRGRGECFLI----YDFAPKGKLSKYLDQEEG--------SSNVLDWSTRVSI 417
L G+C I Y F KLS LD G V +
Sbjct: 244 SLVS------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
I G+ ++H+ +V+R+L +L+D+ + I+D G LA D FS K
Sbjct: 298 AAEIILGLEHMHNR-----FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKK 346
Query: 478 TSAAM---GYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
A++ GY+APE + G + +D F+ G ++ ++L G
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
FS ++G+G F VY D G + A++ ++ K ++ E + +L ++
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETL-------ALNERIML 243
Query: 370 RLRGFCCSRGRGECFLI----YDFAPKGKLSKYLDQEEG--------SSNVLDWSTRVSI 417
L G+C I Y F KLS LD G V +
Sbjct: 244 SLVS------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 297
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
I G+ ++H+ +V+R+L +L+D+ + I+D G LA D FS K
Sbjct: 298 AAEIILGLEHMHNR-----FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKK 346
Query: 478 TSAAM---GYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
A++ GY+APE + G + +D F+ G ++ ++L G
Sbjct: 347 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 315 NLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRG 373
+L +G F+ VY+ + G A++ + + A + ++ H NI++
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ--- 90
Query: 374 FCCS---------RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
FC + G+ E L+ + KG+L ++L + E S L T + I +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKME-SRGPLSCDTVLKIFYQTCRA 148
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS---------- 474
+ ++H KP I+HR+L VE +L+ Q + D G ++ +S
Sbjct: 149 VQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 475 --VLKTSAAMGYLAPEYV---TTGRFTERSDIFAFGVII 508
+ + + M Y PE + + E+ DI+A G I+
Sbjct: 206 EEITRNTTPM-YRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENII 369
FS ++G+G F VY D G + A++ ++ K ++ E T +E I+
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE--------TLALNERIM 241
Query: 370 RLRGFCCSRGRGECFLI----YDFAPKGKLSKYLDQEEG--------SSNVLDWSTRVSI 417
G+C I Y F KLS LD G V +
Sbjct: 242 -----LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY 296
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLK 477
I G+ ++H+ +V+R+L +L+D+ + I+D G LA D FS K
Sbjct: 297 AAEIILGLEHMHNR-----FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKK 345
Query: 478 TSAAM---GYLAPEYVTTG-RFTERSDIFAFGVIILQILTG 514
A++ GY+APE + G + +D F+ G ++ ++L G
Sbjct: 346 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + + YLA
Sbjct: 177 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLA 227
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 23/235 (9%)
Query: 314 VNLLGKGNFSSVYKGTLRDG---TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
V +G GNF +RD LVA++ I + E + + + SLRH NI+R
Sbjct: 25 VKDIGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENVQ--REIINHRSLRHPNIVR 80
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + +I ++A G+L + + ++ + G+ Y HS
Sbjct: 81 FKEVILTPT--HLAIIMEYASGGELYERI----CNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
+ I HR+L +E L+D P + C + + T Y+APE +
Sbjct: 135 MQ-----ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 491 TTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
+ + +D+++ GV + +L G+ E + I R L K+S
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFED----PEEPRDYRKTIQRILSVKYS 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 31/240 (12%)
Query: 284 LNGTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKG-TLRDGTLVAIRSIN 342
+ GF ++ +N L + + +G G + SV R G VAI+ ++
Sbjct: 5 IRKKGFYKQDVNKTAWEL------PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS 58
Query: 343 VTSCKSE--EAEFVKGLYLLTSLRHENIIRLRGFCCS----RGRGECFLIYDFAPKGKLS 396
+SE + L LL ++HEN+I L R + +L+ F + L
Sbjct: 59 -RPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQ 116
Query: 397 KYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
K + + + ++ + KG+ Y+HS+ +VHR+L + +++
Sbjct: 117 KIMGLKFSEEKI------QYLVYQMLKGLKYIHSA-----GVVHRDLKPGNLAVNEDCEL 165
Query: 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGS 515
I D GL + ++ V+ Y APE + + + + DI++ G I+ ++LTG
Sbjct: 166 KILDFGLARHADAEMTGYVV----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 305 ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFV-KGLYLLTSL 363
E ++ ++G G+F V++ L + VAI+ + ++ F + L ++ +
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV------LQDKRFKNRELQIMRIV 89
Query: 364 RHENIIRLRGFCCSRG--RGECF--LIYDFAPKG--KLSKYLDQEEGSSNVLDWSTRVSI 417
+H N++ L+ F S G + E F L+ ++ P+ + S++ + + + +L
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL---Y 146
Query: 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-IADCGLHK-LLADDIVFSV 475
+ + + + Y+HS I HR++ + +L+D L + D G K L+A + S
Sbjct: 147 MYQLLRSLAYIHSI-----GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 476 LKTSAAMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGS 515
+ + Y APE + +T DI++ G ++ +++ G
Sbjct: 202 I---CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 177 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 227
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 177 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 227
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 149 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 199
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + +++ T YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-TWTLCGTPE---YLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 149 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 199
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 151 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 201
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 312 SEVNLLGKGNFSSVYK-GTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
S+ +LG G F V+K G +A + I K +E E + ++ L H N+I+
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE-EVKNEISVMNQLDHANLIQ 150
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKL-SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L + + + L+ ++ G+L + +D+ S N+ + T + + I +GI ++H
Sbjct: 151 L--YDAFESKNDIVLVMEYVDGGELFDRIIDE---SYNLTELDT-ILFMKQICEGIRHMH 204
Query: 430 SSEVNKPAIVHRNLSVEKVL-IDQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGYLAP 487
+ I+H +L E +L +++ + I D GL + V +LAP
Sbjct: 205 -----QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV--NFGTPEFLAP 257
Query: 488 EYVTTGRFTERSDIFAFGVIILQILTG 514
E V + +D+++ GVI +L+G
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 45/236 (19%)
Query: 359 LLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKL------SKYLDQEEGSSNVLDWS 412
LL +H NII L+ G+ +++ + G+L K+ + E S+
Sbjct: 69 LLRYGQHPNIITLKD-VYDDGK-YVYVVTELXKGGELLDKILRQKFFSEREASA------ 120
Query: 413 TRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL-IDQQFNP---LIADCGLHKLLA 468
++ I K + YLH+ +VHR+L +L +D+ NP I D G K L
Sbjct: 121 ----VLFTITKTVEYLHAQ-----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 469 DDIVFSVLKTSA-AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE 527
+ +L T ++APE + + DI++ GV++ LTG +
Sbjct: 172 AE--NGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN-----GP 224
Query: 528 SATFENFIDRNLKGKF--------SESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
T E + R GKF S S+ AK + H DP R T V+
Sbjct: 225 DDTPEEILARIGSGKFSLSGGYWNSVSDTAK--DLVSKXLHVDPHQRLTAALVLRH 278
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 168
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D G K + YLAPE + + + + D +A
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T A ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 167
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D G K + YLAPE + + + + D +A
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 168
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D G K + YLAPE + + + + D +A
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 167
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D G K + YLAPE + + + + D +A
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 224 LGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443
+++ ++AP G++ +L + S I++ YLHS + +++R+L
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE----YLHSLD-----LIYRDL 168
Query: 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFA 503
E ++IDQQ + D G K + YLAPE + + + + D +A
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 504 FGVIILQILTG 514
GV+I ++ G
Sbjct: 225 LGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 142 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLA 192
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 31/241 (12%)
Query: 315 NLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTS----LRHENII 369
++GKG FS V + R+ G A++ ++V S + L S L+H +I+
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L S G +++++F L + + + V + + I + + Y H
Sbjct: 90 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFN--PL-IADCGLHKLLADDIVFSVLKTSAAMG--- 483
+ I+HR++ E VL+ + N P+ + D G+ L + S L +G
Sbjct: 148 DNN-----IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE----SGLVAGGRVGTPH 198
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
++APE V + + D++ GVI+ +L+G L T E + +KGK+
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY---------GTKERLFEGIIKGKY 249
Query: 544 S 544
Sbjct: 250 K 250
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 32/178 (17%)
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSK----YLDQEEGSSNV-- 408
+ L LL + H+NII L F P+ L + YL E +N+
Sbjct: 70 RELVLLKCVNHKNIISLLNV--------------FTPQKTLEEFQDVYLVMELMDANLCQ 115
Query: 409 -----LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463
LD ++ + GI +LHS+ I+HR+L +++ I D GL
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPSNIVVKSDCTLKILDFGL 170
Query: 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521
+ + + F + Y APE + + E DI++ G I+ +++ GS++ +
Sbjct: 171 ARTASTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHEN 367
Q ++ N +G+G++ V K ++ GT + + + E+ + F + + ++ SL H N
Sbjct: 26 QYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
IIRL + + +L+ + G+L + + + V S I+ + + Y
Sbjct: 85 IIRL--YETFEDNTDIYLVMELCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAY 138
Query: 428 LHSSEVNKPAIVHRNLSVEKVLI--DQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGY 484
H K + HR+L E L D +PL + D GL +++T Y
Sbjct: 139 CH-----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKVGTPY 190
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTG 514
V G + D ++ GV++ +L G
Sbjct: 191 YVSPQVLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR++ E +L+ + D G+ D+ + + T + Y APE + T R+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 500 DIFAFGVIILQILTGS 515
DI+A ++ + LTGS
Sbjct: 217 DIYALTCVLYECLTGS 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E ++IDQQ + D G K + YLA
Sbjct: 157 YLHSLD-----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLA 207
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E ++IDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E ++IDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/187 (17%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 333 GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRL-RGFCCSRGRGECFLIYDFAP 391
G VA++ +++ + E F + ++ +H N++ + + + E +++ +F
Sbjct: 70 GRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSYLVGE---ELWVLMEFLQ 125
Query: 392 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 451
G L+ + Q L+ ++ + + + YLH+ ++HR++ + +L+
Sbjct: 126 GGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHAQ-----GVIHRDIKSDSILLT 175
Query: 452 QQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVII 508
++D G ++ D V K +G ++APE ++ + DI++ G+++
Sbjct: 176 LDGRVKLSDFGFCAQISKD----VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 509 LQILTGS 515
++++ G
Sbjct: 232 IEMVDGE 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHEN 367
Q ++ N +G+G++ V K ++ GT + + + E+ + F + + ++ SL H N
Sbjct: 9 QYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
IIRL + + +L+ + G+L + + + V S I+ + + Y
Sbjct: 68 IIRL--YETFEDNTDIYLVMELCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAY 121
Query: 428 LHSSEVNKPAIVHRNLSVEKVLI--DQQFNPL-IADCGLHKLLADDIVFSVLKTSAAMGY 484
H K + HR+L E L D +PL + D GL +++T Y
Sbjct: 122 CH-----KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG---KMMRTKVGTPY 173
Query: 485 LAPEYVTTGRFTERSDIFAFGVIILQILTG 514
V G + D ++ GV++ +L G
Sbjct: 174 YVSPQVLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 89/221 (40%), Gaps = 15/221 (6%)
Query: 297 FRLNLEEVESATQCFSEVNLLGKGNFSSVYKGT-LRDGTLVAIRSINVTSCKSEEAEFVK 355
F+ E E + LG+G + V K + G + A++ I T E+ +
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLX 81
Query: 356 GLYLLTSLRHENIIRLRGFCCSRGR-GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR 414
L + S R + F + R G+ ++ + L K+ Q +
Sbjct: 82 DLDI--SXRTVDCPFTVTFYGALFREGDVWICXELX-DTSLDKFYKQVIDKGQTIPEDIL 138
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFS 474
I + I K + +LHS K +++HR++ VLI+ D G+ L DD+
Sbjct: 139 GKIAVSIVKALEHLHS----KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 475 VLKTSAAMGYLAPEYVTT----GRFTERSDIFAFGVIILQI 511
+ + Y APE + ++ +SDI++ G+ +++
Sbjct: 195 I--DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 286 GTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVT 344
GT F +E+++ + EE LG G F+ V K + G A + I
Sbjct: 1 GTVFRQENVDDYYDTGEE-------------LGSGQFAVVKKCREKSTGLQYAAKFIKKR 47
Query: 345 SCKSEE-----AEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL 399
KS + + + +L ++H N+I L + + LI + G+L +L
Sbjct: 48 RTKSSRRGVSREDIEREVSILKEIQHPNVITLHE--VYENKTDVILILELVAGGELFDFL 105
Query: 400 DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-- 457
++E L + I G+ YLHS + I H +L E +++ + P
Sbjct: 106 AEKES----LTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLDRNVPKPR 156
Query: 458 --IADCGL-HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
I D GL HK+ + ++ T ++APE V +D+++ GVI +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 515 S---LVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTME 570
+ L T LA SA F D + + A + LV +DP+ R T++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSN--TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 46/299 (15%)
Query: 286 GTGFSREHLNSFRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVT 344
GT F +E+++ + EE LG G F+ V K + G A + I
Sbjct: 1 GTVFRQENVDDYYDTGEE-------------LGSGQFAVVKKCREKSTGLQYAAKFIKKR 47
Query: 345 SCKSEE-----AEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYL 399
KS + + + +L ++H N+I L + + LI + G+L +L
Sbjct: 48 RTKSSRRGVSREDIEREVSILKEIQHPNVITLHE--VYENKTDVILILELVAGGELFDFL 105
Query: 400 DQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL-- 457
++E L + I G+ YLHS + I H +L E +++ + P
Sbjct: 106 AEKES----LTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLDRNVPKPR 156
Query: 458 --IADCGL-HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
I D GL HK+ + ++ T ++APE V +D+++ GVI +L+G
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 515 S---LVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTME 570
+ L T LA SA F D + + A + LV +DP+ R T++
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSN--TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ GV
Sbjct: 156 NIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 507 IILQILTGSLVLTSS 521
I+ +++ G ++ +
Sbjct: 214 IMGEMIKGGVLFPGT 228
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ GV
Sbjct: 156 NIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGV 213
Query: 507 IILQILTGSLVLTSS 521
I+ +++ G ++ +
Sbjct: 214 IMGEMIKGGVLFPGT 228
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LID+Q + D G K + YLA
Sbjct: 143 YLHSLD-----LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 193
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 78 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 131
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 132 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 183
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 242
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 243 -TSALAKDFIRRLLV---KDPKKRMTIQ 266
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + + + T A LA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-TWXLCGTPEA---LA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
PE + + + + D +A GV+I ++ G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 78 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 131
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 132 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 183
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 242
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 243 -TSALAKDFIRRLLV---KDPKKRMTIQ 266
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/185 (15%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 333 GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 392
G VA++ +++ + E F + ++ H+N++ + + E +++ +F
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDM--YSSYLVGDELWVVMEFLEG 126
Query: 393 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
G L+ + + + ++ + + + + YLH+ ++HR++ + +L+
Sbjct: 127 GALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQ-----GVIHRDIKSDSILLTS 176
Query: 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIIL 509
++D G ++ + V K +G ++APE ++ + DI++ G++++
Sbjct: 177 DGRIKLSDFGFCAQVSKE----VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 232
Query: 510 QILTG 514
+++ G
Sbjct: 233 EMIDG 237
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-- 478
I G+ +LH I++R+L E VL+D N I+D G LA ++ KT
Sbjct: 298 IVSGLEHLHQRN-----IIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKG 348
Query: 479 -SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ G++APE + + D FA GV + +++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-- 478
I G+ +LH I++R+L E VL+D N I+D G LA ++ KT
Sbjct: 298 IVSGLEHLHQRN-----IIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKG 348
Query: 479 -SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ G++APE + + D FA GV + +++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 415 VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGLHKLLADD 470
+ +I I +G+ YLH + IVH +L + +L+ + PL I D G+ + +
Sbjct: 134 IRLIKQILEGVYYLHQNN-----IVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIG-- 185
Query: 471 IVFSVLKTSAAMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE 527
+ MG YLAPE + T +D++ G+I +LT TS
Sbjct: 186 ---HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH----TSPFVGEDN 238
Query: 528 SATFENFIDRNLKGKFSESEAAKLGKMALVCTH----EDPENRPTME 570
T+ N N+ +SE + + ++A ++PE RPT E
Sbjct: 239 QETYLNISQVNV--DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-- 478
I G+ +LH I++R+L E VL+D N I+D G LA ++ KT
Sbjct: 298 IVSGLEHLHQRN-----IIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKG 348
Query: 479 -SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ G++APE + + D FA GV + +++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKT-- 478
I G+ +LH I++R+L E VL+D N I+D G LA ++ KT
Sbjct: 298 IVSGLEHLHQRN-----IIYRDLKPENVLLDDDGNVRISDLG----LAVELKAGQTKTKG 348
Query: 479 -SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
+ G++APE + + D FA GV + +++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 28/131 (21%)
Query: 405 SSNVLDWSTR------------VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452
N+ DW R + I I IA+ + +LHS ++HR+L +
Sbjct: 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-----GLMHRDLKPSNIFFTM 199
Query: 453 QFNPLIADCGLHKLLADD----IVFSVLKTSAAMG-------YLAPEYVTTGRFTERSDI 501
+ D GL + D V + + A Y++PE + ++ + DI
Sbjct: 200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDI 259
Query: 502 FAFGVIILQIL 512
F+ G+I+ ++L
Sbjct: 260 FSLGLILFELL 270
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE V +D+++ GVI +L+G+
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGA 214
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F VYK ++ +++A + T + E +++ + +L S H NI++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL--LDA 102
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKGIGYLHSSEVNK 435
+++ +F G + + + E +++ ++ + YLH ++
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNK--- 155
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
I+HR+L +L + +AD G ++ ++ + + +G ++APE V
Sbjct: 156 --IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 493 GRFTER-----SDIFAFGVIILQI 511
+R +D+++ G+ ++++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS 515
APE V +D+++ GVI +L+G+
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGA 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 427 YLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLA 486
YLHS + +++R+L E +LIDQQ + D G K + YLA
Sbjct: 156 YLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLA 206
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTG 514
P + + + + D +A GV+I ++ G
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/201 (18%), Positives = 90/201 (44%), Gaps = 23/201 (11%)
Query: 320 GNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG 379
G+F VYK ++ +++A + T + E +++ + +L S H NI++L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL--LDAFYY 78
Query: 380 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKGIGYLHSSEVNKPAI 438
+++ +F G + + + E +++ ++ + YLH ++ I
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNK-----I 129
Query: 439 VHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTTGRF 495
+HR+L +L + +AD G+ A + + + + +G ++APE V
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 496 TER-----SDIFAFGVIILQI 511
+R +D+++ G+ ++++
Sbjct: 187 KDRPYDYKADVWSLGITLIEM 207
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILIGELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F VYK ++ +++A + T + E +++ + +L S H NI++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL--LDA 102
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKGIGYLHSSEVNK 435
+++ +F G + + + E +++ ++ + YLH ++
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNK--- 155
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
I+HR+L +L + +AD G ++ + + + +G ++APE V
Sbjct: 156 --IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 493 GRFTER-----SDIFAFGVIILQI 511
+R +D+++ G+ ++++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+G+ YLH++ V +HR+L + + ++ + I D GL A I F +
Sbjct: 153 QGVQYLHNNRV-----IHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKTLC 203
Query: 483 G---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
G Y+APE + + DI++ G I+ +L G + E++ + R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG--------KPPFETSCLKETYIRIK 255
Query: 540 KGKFSESEAAKLGKMALV--CTHEDPENRPTMEAVIEE 575
K ++S AL+ H DP RP++ ++ +
Sbjct: 256 KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+G+ YLH++ V +HR+L + + ++ + I D GL A I F +
Sbjct: 153 QGVQYLHNNRV-----IHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKXLC 203
Query: 483 G---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
G Y+APE + + DI++ G I+ +L G + S E +I R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET-------SCLKETYI-RIK 255
Query: 540 KGKFSESEAAKLGKMALV--CTHEDPENRPTMEAVIEE 575
K ++S AL+ H DP RP++ ++ +
Sbjct: 256 KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSE------EAEFVKGLYLLTSLRHENI 368
+LLG+G++ V + + D + R++ + K EA K + LL LRH+N+
Sbjct: 11 DLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQ-EEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+L + + + +++ ++ G + + LD E V +I G+ Y
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLI---DGLEY 124
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG----LHKLLADDIVFSVLKTSAAMG 483
LHS IVH+++ +L+ I+ G LH ADD +TS
Sbjct: 125 LHSQ-----GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD----TCRTSQGSP 175
Query: 484 YLAPEYVTTGRFT---ERSDIFAFGVIILQILTG 514
P + G T + DI++ GV + I TG
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 317 LGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE-----AEFVKGLYLLTSLRHENIIR 370
LG G F+ V K + G A + I KS + + + +L ++H N+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
L + + LI + G+L +L ++E L + I G+ YLHS
Sbjct: 79 LHE--VYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHS 132
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPL----IADCGL-HKLLADDIVFSVLKTSAAMGYL 485
+ I H +L E +++ + P I D GL HK+ + ++ T ++
Sbjct: 133 LQ-----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE---FV 184
Query: 486 APEYVTTGRFTERSDIFAFGVIILQILTGS---LVLTSSMRLAAESATFENFIDRNLKGK 542
APE V +D+++ GVI +L+G+ L T LA SA F D
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN- 243
Query: 543 FSESEAAKLGKMALVCTHEDPENRPTME 570
+ + A + LV +DP+ R T++
Sbjct: 244 -TSALAKDFIRRLLV---KDPKKRMTIQ 267
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 23/238 (9%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ V +G GNF +RD LVA++ I E + + + SLRH N
Sbjct: 21 YELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 76
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+R + + ++ ++A G+L + + ++ + G+ Y
Sbjct: 77 IVRFKEVILTPTH--LAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSY 130
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAP 487
H+ +V HR+L +E L+D P + C + + T Y+AP
Sbjct: 131 CHAMQV-----CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
Query: 488 EYVTTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
E + + + +D+++ GV + +L G+ E F I R L +++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----PEEPKNFRKTIHRILNVQYA 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+G+ YLH++ V +HR+L + + ++ + I D GL A I F +
Sbjct: 137 QGVQYLHNNRV-----IHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKDLC 187
Query: 483 G---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
G Y+APE + + DI++ G I+ +L G + E++ + R
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG--------KPPFETSCLKETYIRIK 239
Query: 540 KGKFSESEAAKLGKMALV--CTHEDPENRPTMEAVIEE 575
K ++S AL+ H DP RP++ ++ +
Sbjct: 240 KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 23/235 (9%)
Query: 314 VNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR 370
V +G GNF +RD LVA++ I E + + + SLRH NI+R
Sbjct: 24 VKDIGSGNFGVAR--LMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPNIVR 79
Query: 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS 430
+ + ++ ++A G+L + + ++ + G+ Y H+
Sbjct: 80 FKEVILTPTH--LAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 431 SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV 490
+V HR+L +E L+D P + C + + T Y+APE +
Sbjct: 134 MQV-----CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 491 TTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
+ + +D+++ GV + +L G+ E F I R L +++
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFED----PEEPKNFRKTIHRILNVQYA 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAM 482
+G+ YLH++ V +HR+L + + ++ + I D GL A I F +
Sbjct: 153 QGVQYLHNNRV-----IHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKDLC 203
Query: 483 G---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539
G Y+APE + + DI++ G I+ +L G + S E +I R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET-------SCLKETYI-RIK 255
Query: 540 KGKFSESEAAKLGKMALV--CTHEDPENRPTMEAVIEE 575
K ++S AL+ H DP RP++ ++ +
Sbjct: 256 KNEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/204 (18%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F VYK ++ +++A + T + E +++ + +L S H NI++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL--LDA 102
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIG-IAKGIGYLHSSEVNK 435
+++ +F G + + + E +++ ++ + YLH ++
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLT----ESQIQVVCKQTLDALNYLHDNK--- 155
Query: 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEYVTT 492
I+HR+L +L + +AD G ++ + + +G ++APE V
Sbjct: 156 --IIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 493 GRFTER-----SDIFAFGVIILQI 511
+R +D+++ G+ ++++
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 359 LLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLS-----KYLDQEEGSSNVLDWST 413
+L L H N+++L +++++ +G + K L +++ D
Sbjct: 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD--- 145
Query: 414 RVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL-HKLLADDIV 472
+ KGI YLH + I+HR++ +L+ + + IAD G+ ++ D +
Sbjct: 146 -------LIKGIEYLHYQK-----IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 473 FSVLKTSAAMGYLAPEYVTTGR--FTERS-DIFAFGVII 508
S T ++APE ++ R F+ ++ D++A GV +
Sbjct: 194 LS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ--QFNPL-IADCGLH---KLLADD 470
++ +A + +LH+ I HR+L E +L + Q +P+ I D GL KL D
Sbjct: 116 VVQDVASALDFLHNK-----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC 170
Query: 471 IVFS---VLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTG 514
S +L + Y+APE V + +R D+++ GVI+ +L+G
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLVGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ G
Sbjct: 156 NIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 507 IILQILTGSLVLTSS 521
I+ +++ G ++ +
Sbjct: 214 IMGEMIKGGVLFPGT 228
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 23/238 (9%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ V +G GNF +RD LVA++ I E + + + SLRH N
Sbjct: 20 YELVKDIGSGNFGVA--RLMRDKQSNELVAVKYIERGEKIDENVK--REIINHRSLRHPN 75
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+R + + ++ ++A G+L + + ++ + G+ Y
Sbjct: 76 IVRFKEVILTPTH--LAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSY 129
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAP 487
H+ +V HR+L +E L+D P + C + + T Y+AP
Sbjct: 130 CHAMQV-----CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
Query: 488 EYVTTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
E + + + +D+++ GV + +L G+ E F I R L +++
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----PEEPKNFRKTIHRILNVQYA 238
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 309 QCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEE----AEFVKGLYLLTSL 363
Q F + ++G+G+++ V L+ + A+R + +E + K ++ S
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS- 110
Query: 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGI 421
H ++ L C + F + ++ G L ++ ++ + +S +S+
Sbjct: 111 NHPFLVGLH--SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL---- 164
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LLADDIVFSVLKTS 479
+ YLH I++R+L ++ VL+D + + + D G+ K L D + T
Sbjct: 165 --ALNYLHER-----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP 217
Query: 480 AAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y+APE + + D +A GV++ +++ G
Sbjct: 218 ---NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 83/215 (38%), Gaps = 41/215 (19%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNV--------------FT 95
Query: 391 PKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L ++ D E +N+ LD ++ + GI +LHS+ I+
Sbjct: 96 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 150
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F ++ Y APE + + E
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMVPFVVTRYYRAPEVILGMGYKENV 208
Query: 500 DIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
DI++ G I+ +++ G ++ + + + E
Sbjct: 209 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 93/238 (39%), Gaps = 23/238 (9%)
Query: 311 FSEVNLLGKGNFSSVYKGTLRD---GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN 367
+ V +G GNF +RD LVA++ I + A + + SLRH N
Sbjct: 21 YELVKDIGSGNFGVAR--LMRDKQSNELVAVKYIE--RGEKIAANVKREIINHRSLRHPN 76
Query: 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427
I+R + + ++ ++A G+L + + ++ + G+ Y
Sbjct: 77 IVRFKEVILTPTH--LAIVMEYASGGELFERI----CNAGRFSEDEARFFFQQLISGVSY 130
Query: 428 LHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAP 487
H+ +V HR+L +E L+D P + C + + T Y+AP
Sbjct: 131 CHAMQV-----CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
Query: 488 EYVTTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
E + + + +D+++ GV + +L G+ E F I R L +++
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED----PEEPKNFRKTIHRILNVQYA 239
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 41/202 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNV--------------FT 93
Query: 391 PKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L ++ D E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPEVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVLTSS 521
DI++ G I+ +++ G ++ +
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ G
Sbjct: 156 NIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 507 IILQILTGSLVLTSS 521
I+ +++ G ++ +
Sbjct: 214 IMGEMIKGGVLFPGT 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 41/215 (19%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNV--------------FT 93
Query: 391 PKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L ++ D E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
DI++ G I+ +++ G ++ + + + E
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 41/215 (19%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNV--------------FT 94
Query: 391 PKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L ++ D E +N+ LD ++ + GI +LHS+ I+
Sbjct: 95 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 149
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 500 DIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
DI++ G I+ +++ G ++ + + + E
Sbjct: 208 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 32/178 (17%)
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSK----YLDQEEGSSNV-- 408
+ L LL + H+NII L F P+ L + YL E +N+
Sbjct: 72 RELVLLKCVNHKNIISLLNV--------------FTPQKTLEEFQDVYLVMELMDANLCQ 117
Query: 409 -----LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463
LD ++ + GI +LHS+ I+HR+L +++ I D GL
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521
+ + F + Y APE + + DI++ G I+ +++ G ++ +
Sbjct: 173 ARTACTN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 27/195 (13%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ G
Sbjct: 156 NIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 507 IILQILTGSLVLTSS 521
I+ +++ G ++ +
Sbjct: 214 IMGEMIKGGVLFPGT 228
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCG-LHKLLADDIVFSVLKTSAAMG---YLAPE 488
V++ VHR++ + +L+D + +AD G KL+ D V ++S A+G Y++PE
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV----QSSVAVGTPDYISPE 246
Query: 489 YVTT-----GRFTERSDIFAFGVIILQILTGS 515
+ GR+ D ++ GV + ++L G
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 27/208 (12%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE----CFLI 386
VAI+ + N T K E V L+ + H+NII L + E +++
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107
Query: 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446
+ LS+ + E LD ++ + GI +LHS+ I+HR+L
Sbjct: 108 MELM-DANLSQVIQME------LDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPS 155
Query: 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGV 506
+++ I D GL + F + Y APE + + E DI++ G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 507 IILQILTGSLVLTSSMRLAAESATFENF 534
I+ +++ G ++ + + + E
Sbjct: 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 41/215 (19%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLLNV--------------FT 93
Query: 391 PKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L ++ D E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534
DI++ G I+ +++ G ++ + + + E
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 25/237 (10%)
Query: 315 NLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTS----LRHENII 369
++GKG FS V + R+ G A++ ++V S + L S L+H +I+
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L S G +++++F L + + + V + + I + + Y H
Sbjct: 92 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
+ I+HR++ VL+ + N G + A + S L +G ++A
Sbjct: 150 DNN-----IIHRDVKPHCVLLASKENSAPVKLGGFGV-AIQLGESGLVAGGRVGTPHFMA 203
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543
PE V + + D++ GVI+ +L+G L T E + +KGK+
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFY---------GTKERLFEGIIKGKY 251
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKXVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 97/238 (40%), Gaps = 25/238 (10%)
Query: 315 NLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTS----LRHENII 369
++GKG FS V + R+ G A++ ++V S + L S L+H +I+
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH 429
L S G +++++F L + + + V + + I + + Y H
Sbjct: 90 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 430 SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLA 486
+ I+HR++ VL+ + N G + A + S L +G ++A
Sbjct: 148 DNN-----IIHRDVKPHCVLLASKENSAPVKLGGFGV-AIQLGESGLVAGGRVGTPHFMA 201
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544
PE V + + D++ GVI+ +L+G L T E + +KGK+
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFY---------GTKERLFEGIIKGKYK 250
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 86
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA-----GII 141
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 200 DIWSVGCIMGEMVRHKILF 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LLADDIVFSVLKT 478
I+ + YLH I++R+L ++ VL+D + + + D G+ K L D T
Sbjct: 130 ISLALNYLHER-----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 184
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y+APE + + D +A GV++ +++ G
Sbjct: 185 P---NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LLADDIVFSVLKT 478
I+ + YLH I++R+L ++ VL+D + + + D G+ K L D T
Sbjct: 119 ISLALNYLHER-----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 173
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y+APE + + D +A GV++ +++ G
Sbjct: 174 P---NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK--LLADDIVFSVLKT 478
I+ + YLH I++R+L ++ VL+D + + + D G+ K L D T
Sbjct: 115 ISLALNYLHER-----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGT 169
Query: 479 SAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTG 514
Y+APE + + D +A GV++ +++ G
Sbjct: 170 P---NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKXVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKXVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 32/175 (18%)
Query: 355 KGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSK----YLDQEEGSSNV-- 408
+ L L+ + H+NII L F P+ L + YL E +N+
Sbjct: 110 RELVLMKCVNHKNIISLLNV--------------FTPQKTLEEFQDVYLVMELMDANLCQ 155
Query: 409 -----LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463
LD ++ + GI +LHS+ I+HR+L +++ I D GL
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSA-----GIIHRDLKPSNIVVKSDCTLKILDFGL 210
Query: 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518
+ F + Y APE + + E DI++ G I+ +++ ++
Sbjct: 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 131
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 186
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 245 DIWSVGCIMGEMVRHKILF 263
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 87
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 142
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 201 DIWSVGCIMGEMVRHKILF 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 86
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 141
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 200 DIWSVGCIMGEMVRHKILF 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEY 489
+++ VHR++ + VL+D + +AD G + DD +++S A+G Y++PE
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD---GTVQSSVAVGTPDYISPEI 263
Query: 490 VTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES--ATFENFIDRNLKGK 542
+ G++ D ++ GV + ++L G AES T+ ++ + +
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYG------ETPFYAESLVETYGKIMNHEERFQ 317
Query: 543 FSE-----SEAAKLGKMALVCTHE 561
F SE AK L+C+ E
Sbjct: 318 FPSHVTDVSEEAKDLIQRLICSRE 341
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 87
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 142
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 201 DIWSVGCIMGEMVRHKILF 219
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMG---YLAPEY 489
+++ VHR++ + VL+D + +AD G + DD +++S A+G Y++PE
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD---GTVQSSVAVGTPDYISPEI 247
Query: 490 VTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES--ATFENFIDRNLKGK 542
+ G++ D ++ GV + ++L G AES T+ ++ + +
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYG------ETPFYAESLVETYGKIMNHEERFQ 301
Query: 543 FSE-----SEAAKLGKMALVCTHE 561
F SE AK L+C+ E
Sbjct: 302 FPSHVTDVSEEAKDLIQRLICSRE 325
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 19/112 (16%)
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ--QFNPL-IADCGLH---KLLADD 470
++ +A + +LH+ I HR+L E +L + Q +P+ I D L KL D
Sbjct: 116 VVQDVASALDFLHNK-----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170
Query: 471 IVFS---VLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTG 514
S +L + Y+APE V + +R D+++ GVI+ +L+G
Sbjct: 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/266 (16%), Positives = 109/266 (40%), Gaps = 29/266 (10%)
Query: 304 VESATQCFSEVNLLGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYL 359
++ + + V ++G+G F V +K + + + + + +S+ A F + +
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIK-RSDSAFFWEERDI 128
Query: 360 LTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIII 419
+ +++L FC + +++ ++ P G L + + W+ + +
Sbjct: 129 MAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK---WAKFYTAEV 183
Query: 420 GIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTS 479
+A + +HS ++HR++ + +L+D+ + +AD G + + +
Sbjct: 184 VLA--LDAIHSM-----GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 480 AAMGYLAPEYVTT----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535
Y++PE + + G + D ++ GV + ++L G + + T+ +
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV----GTYSKIM 292
Query: 536 DRNLKGKFSESEAAKLGKMA--LVCT 559
D K E A++ K A L+C
Sbjct: 293 DH--KNSLCFPEDAEISKHAKNLICA 316
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 124 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKV 174
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 232
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 233 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 266
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 92
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 93 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 147
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 206 DIWSVGCIMGEMVRHKILF 224
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 126 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKT 176
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 234
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 235 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 268
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 94
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 149
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 208 DIWSVGCIMGEMVRHKILF 226
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 126 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKT 176
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 234
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 235 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 268
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 93
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 148
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 207 DIWSVGCIMGEMVRHKILF 225
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 41/199 (20%)
Query: 336 VAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390
VAI+ + N T K E V L+ + H+NII L F
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIISLLNV--------------FT 94
Query: 391 PKGKLSK----YLDQEEGSSNV-------LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIV 439
P+ L + YL E +N+ LD ++ + GI +LHS+ I+
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-----GII 149
Query: 440 HRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERS 499
HR+L +++ I D GL + F + Y APE + + E
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 500 DIFAFGVIILQILTGSLVL 518
DI++ G I+ +++ ++
Sbjct: 208 DIWSVGCIMGEMVRHKILF 226
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 148 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKV 198
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 256
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 257 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 130 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKT 180
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 238
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 239 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%), Gaps = 18/158 (11%)
Query: 421 IAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSA 480
I G YLH + V +HR+L + + +++ I D GL A + + +
Sbjct: 150 IVLGCQYLHRNRV-----IHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERKKV 200
Query: 481 AMG---YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537
G Y+APE ++ + D+++ G I+ +L G +S +N +
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EY 258
Query: 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575
++ + A+ + KM DP RPT+ ++ +
Sbjct: 259 SIPKHINPVAASLIQKM----LQTDPTARPTINELLND 292
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 19/147 (12%)
Query: 16 IIVFKEFSNKIFVIIFQIQLKVI-------LLCFVVLQLCCNQLTGNIPAQIGSLKSLSV 68
I KE +N ++I+ QL+ + L L L NQL L +L+
Sbjct: 78 ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 69 LTLQHNRLNG---GIPDSLGNLGKLKRLDLSFNSLFGTIPESLANN-AELLFLDVQNNTL 124
L L HN+L G+ D L NL +L DLS+N L ++PE + + +L L + N L
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTEL---DLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQL 193
Query: 125 SGIVPSALKRLNGGFQF---QNNPGLC 148
+ RL Q+ +NP C
Sbjct: 194 KSVPDGVFDRLT-SLQYIWLHDNPWDC 219
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 16 IIVFKEFSNKIFVIIFQIQLKVI-------LLCFVVLQLCCNQLTGNIPAQIGSLKSLSV 68
I KE +N ++I+ QL+ + L L L NQL L +L+
Sbjct: 78 ISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 69 LTLQHNRLNG---GIPDSLGNLGKLKRLDLSFNSLFGTIPESLANN-AELLFLDVQNNTL 124
L L HN+L G+ D L NL RLDL N L ++PE + + +L L + +N L
Sbjct: 138 LYLYHNQLQSLPKGVFDKLTNL---TRLDLDNNQL-QSLPEGVFDKLTQLKQLSLNDNQL 193
Query: 125 SGIVPSALKRLNG--GFQFQNNPGLCG 149
+ RL NNP C
Sbjct: 194 KSVPDGVFDRLTSLTHIWLLNNPWDCA 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 14/200 (7%)
Query: 317 LGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376
LG G F V++ + V + T ++ + ++ L H +I L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD--A 116
Query: 377 SRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKP 436
+ E LI +F G+L D+ + + ++ + +G+ ++H
Sbjct: 117 FEDKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH----- 168
Query: 437 AIVHRNLSVEKVLID--QQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR 494
+IVH ++ E ++ + + + I D GL L D + V T+A + APE V
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV--TTATAEFAAPEIVDREP 226
Query: 495 FTERSDIFAFGVIILQILTG 514
+D++A GV+ +L+G
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 53/285 (18%), Positives = 112/285 (39%), Gaps = 33/285 (11%)
Query: 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAI-RSINVTSCKSEEAEFVKGLYLLTSL-R 364
T F E+ +G G F SV+K R DG + AI RS + +E ++ +Y L +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H +++R F + ++ G L+ + + + + +++ + +G
Sbjct: 66 HSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA--DCGLHKLLADDIVFSVLKTSAAM 482
+ Y+HS ++VH ++ + I + P A + ++ ++F +
Sbjct: 124 LRYIHSM-----SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
Query: 483 GYLAPEY-----------VTTGRFTE--RSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529
+P+ V +T ++DIFA + ++ + + +
Sbjct: 179 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEIRQ 238
Query: 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIE 574
I + L +F+E + V H DPE RP+ A+++
Sbjct: 239 GRLPRIPQVLSQEFTE--------LLKVMIHPDPERRPSAMALVK 275
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLI------ADCGLHKLLADDIVFSVLKTSAAMGYLA 486
++K I+H +L E +L+ QQ I + C H+ V++ +++ Y A
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-----VYTXIQSRF---YRA 267
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518
PE + R+ D+++ G I+ ++LTG +L
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLI------ADCGLHKLLADDIVFSVLKTSAAMGYLA 486
++K I+H +L E +L+ QQ I + C H+ V++ +++ Y A
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-----VYTXIQSRF---YRA 267
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518
PE + R+ D+++ G I+ ++LTG +L
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 50 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109
NQ T +P ++ + K L+++ L +NR++ S N+ +L L LS+N L P +
Sbjct: 41 NQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFD 99
Query: 110 NNAELLFLDVQNNTLSGIVP 129
L L + N +S +VP
Sbjct: 100 GLKSLRLLSLHGNDIS-VVP 118
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAI-RSINVTSCKSEEAEFVKGLYLLTSL-R 364
T F E+ +G G F SV+K R DG + AI RS + +E ++ +Y L +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H +++R F + ++ G L+ + + + + +++ + +G
Sbjct: 68 HSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
+ Y+HS ++VH ++ + I + P
Sbjct: 126 LRYIHSM-----SLVHMDIKPSNIFISRTSIP 152
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAI-RSINVTSCKSEEAEFVKGLYLLTSL-R 364
T F E+ +G G F SV+K R DG + AI RS + +E ++ +Y L +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H +++R F + ++ G L+ + + + + +++ + +G
Sbjct: 68 HSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
+ Y+HS ++VH ++ + I + P
Sbjct: 126 LRYIHSM-----SLVHMDIKPSNIFISRTSIP 152
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 345 SCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG 404
S KS+ +F L ++T +++E + G E ++IY++ + K+ +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIIT--NYDEVYIIYEYMENDSILKF----DE 135
Query: 405 SSNVLDWSTRVSIIIGIAKGI--------GYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
VLD + I I + K I Y+H N+ I HR++ +L+D+
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH----NEKNICHRDVKPSNILMDKNGRV 191
Query: 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT--TGRFTERSDIFAFGV 506
++D G + + D + + ++ PE+ + + + DI++ G+
Sbjct: 192 KLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
Query: 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAI-RSINVTSCKSEEAEFVKGLYLLTSL-R 364
T F E+ +G G F SV+K R DG + AI RS + +E ++ +Y L +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 365 HENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKG 424
H +++R F + ++ G L+ + + + + +++ + +G
Sbjct: 70 HSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 425 IGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456
+ Y+HS ++VH ++ + I + P
Sbjct: 128 LRYIHSM-----SLVHMDIKPSNIFISRTSIP 154
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 62 SLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQN 121
+LK L VL L +N++N ++ L L+ L+LS+N L + ++ ++D+Q
Sbjct: 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347
Query: 122 NTLSGIVPSALKRL 135
N ++ I K L
Sbjct: 348 NHIAIIQDQTFKFL 361
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 82/217 (37%), Gaps = 43/217 (19%)
Query: 318 GKGNFSSVYKGTLRDGTLVAIRSI-----NVTSCKSEEAEFVKGLYLLTSLRHENIIRLR 372
+G + Y L VAI+ + N T K E V L+ + H+NII L
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELV----LMKCVNHKNIIGLL 89
Query: 373 GFCCSRGRGECFLIYDFAPKGKLSKYLD----QEEGSSNV-------LDWSTRVSIIIGI 421
F P+ L ++ D E +N+ LD ++ +
Sbjct: 90 NV--------------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 422 AKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAA 481
GI +LHS+ I+HR+L +++ I D GL + F +
Sbjct: 136 LCGIKHLHSA-----GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMEPEVVT 188
Query: 482 MGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518
Y APE + + E DI++ G I+ +++ ++
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 416 SIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL-IDQQFNPLI--ADCGLHKLLADDIV 472
I+ I + I YLHS +N I HR++ E +L ++ N ++ D G K
Sbjct: 119 EIMKSIGEAIQYLHS--IN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 171
Query: 473 FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA 525
S+ + Y+APE + ++ + D+++ GVI+ +L G S+ LA
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 61 GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQ 120
G SL+ L L N++ SL L L +L LSFNS+ SLAN L L +
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 121 NNTLSGIVPSAL 132
NN L VP L
Sbjct: 249 NNKLVK-VPGGL 259
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 433 VNKPAIVHRNLSVEKVLIDQQFNPLI------ADCGLHKLLADDIVFSVLKTSAAMGYLA 486
++K I+H +L E +L+ QQ I + C H+ V+ +++ Y A
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR-----VYXXIQSRF---YRA 267
Query: 487 PEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518
PE + R+ D+++ G I+ ++LTG +L
Sbjct: 268 PEVILGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 61 GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQ 120
G SL+ L L N++ SL L L +L LSFNS+ SLAN L L +
Sbjct: 189 GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248
Query: 121 NNTLSGIVPSAL 132
NN L VP L
Sbjct: 249 NNKLVK-VPGGL 259
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL--LNG 170
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL--LNG 170
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTEL-PAGL--LNG 170
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTEL-PAGL--LNG 170
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 59 QIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL--- 115
Q+ +L L L L HN G + +L+ LDL+F L P+S N L
Sbjct: 368 QLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVL 427
Query: 116 -----FLDVQNNTLSGIVPSALKRLN-GGFQFQN 143
FLD N L +P L+ LN G FQ+
Sbjct: 428 NLTYCFLDTSNQHLLAGLP-VLRHLNLKGNHFQD 460
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTEL-PAGL--LNG 170
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL--LNG 170
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 67 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 125
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL--LNG 170
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSL--GNLGKLKRLDLSFNS 99
F L N T ++ +LK L L LQ N L +L N+ L+ LD+S NS
Sbjct: 355 FTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414
Query: 100 LFGTIPESLANNAE-LLFLDVQNNTLSGIV 128
L + AE +L L++ +N L+G V
Sbjct: 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSV 444
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 30 IFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGK 89
+ ++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+
Sbjct: 68 LTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE 126
Query: 90 LKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L+ L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 127 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL-PAGL--LNG 171
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 48 CCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPES 107
C + +IP + S +++VL L HN+L P + +L LD FNS+ PE
Sbjct: 11 CSHLKLTHIPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPEL 68
Query: 108 LANNAELLFLDVQNNTLSGI 127
L L++Q+N LS I
Sbjct: 69 CQILPLLKVLNLQHNELSQI 88
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 NIPAQIGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
N P IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 117 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 32 QIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLK 91
++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 92 RLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTEL-PAGL--LNG 170
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 NIPAQIGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
N P IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 141 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 32 QIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLK 91
++Q+ L L L NQL ++P +L +L+VL + NRL +L LG+L+
Sbjct: 69 KLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 92 RLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG 137
L L N L P L +L L + NN L+ + P+ L LNG
Sbjct: 128 ELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTEL-PAGL--LNG 170
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 IGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 IGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 IGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 IGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 163
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 IGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 162
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 55 NIPAQIGSLKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSL 100
N P IG LK+L L + HN + +P+ NL L+ LDLS N +
Sbjct: 117 NFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 484 YLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTS 520
Y APE + + SD+++FG ++ ++ TGSL+ +
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 63 LKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNN 122
L SL L L NR+ P + +LG+L L L N+L E+LA L +L + +N
Sbjct: 175 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 63 LKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNN 122
L SL L L NR+ P + +LG+L L L N+L E+LA L +L + +N
Sbjct: 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104
L L N++T + + +L L L N +N DS +LG L+ LDLS+N L
Sbjct: 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116
Query: 105 PESLANNAELLFLDVQNN 122
+ L FL++ N
Sbjct: 117 SSWFKPLSSLTFLNLLGN 134
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/226 (16%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 301 LEEVESATQCFSEVNLLGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKSEEAEFVKG 356
+ ++ + + V ++G+G F V +K T + + + + +S+ A F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEE 124
Query: 357 LYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
++ +++L F + +++ ++ P G L + + W+ +
Sbjct: 125 RDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYT 179
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
+ +A + +HS +HR++ + +L+D+ + +AD G + + ++
Sbjct: 180 AEVVLA--LDAIHSM-----GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE---GMV 229
Query: 477 KTSAAMG---YLAPEYVTT----GRFTERSDIFAFGVIILQILTGS 515
+ A+G Y++PE + + G + D ++ GV + ++L G
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/226 (16%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 301 LEEVESATQCFSEVNLLGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKSEEAEFVKG 356
+ ++ + + V ++G+G F V +K T + + + + +S+ A F +
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEE 124
Query: 357 LYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
++ +++L F + +++ ++ P G L + + W+ +
Sbjct: 125 RDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYT 179
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
+ +A + +HS +HR++ + +L+D+ + +AD G + + ++
Sbjct: 180 AEVVLA--LDAIHSM-----GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE---GMV 229
Query: 477 KTSAAMG---YLAPEYVTT----GRFTERSDIFAFGVIILQILTGS 515
+ A+G Y++PE + + G + D ++ GV + ++L G
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/226 (16%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 301 LEEVESATQCFSEVNLLGKGNFSSV----YKGTLRDGTLVAIRSINVTSCKSEEAEFVKG 356
+ ++ + + V ++G+G F V +K T + + + + +S+ A F +
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEE 119
Query: 357 LYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVS 416
++ +++L F + +++ ++ P G L + + W+ +
Sbjct: 120 RDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYT 174
Query: 417 IIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVL 476
+ +A + +HS +HR++ + +L+D+ + +AD G + + ++
Sbjct: 175 AEVVLA--LDAIHSM-----GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE---GMV 224
Query: 477 KTSAAMG---YLAPEYVTT----GRFTERSDIFAFGVIILQILTGS 515
+ A+G Y++PE + + G + D ++ GV + ++L G
Sbjct: 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 45 LQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSL 100
L L N++T + + +L L L N +N DS +LG L+ LDLS+N L
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 86
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 46 QLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP 105
L Q+ ++P I +VL L HN+L + +L LD+ FN++ P
Sbjct: 18 HLKLTQVPDDLPTNI------TVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEP 71
Query: 106 ESLANNAELLFLDVQNNTLSGI 127
E L L++Q+N LS +
Sbjct: 72 ELCQKLPMLKVLNLQHNELSQL 93
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 46 QLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP 105
L Q+ ++P I +VL L HN+L + +L LD+ FN++ P
Sbjct: 13 HLKLTQVPDDLPTNI------TVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEP 66
Query: 106 ESLANNAELLFLDVQNNTLSGI 127
E L L++Q+N LS +
Sbjct: 67 ELCQKLPMLKVLNLQHNELSQL 88
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLF 101
+ L+L NQ+T P + +L ++ L L N L ++ L +K LDL+ +
Sbjct: 71 LIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQIT 126
Query: 102 GTIPESLANNAELLFLDVQNNTLSGIVPSA----LKRLNGGFQFQNN--PGLCGDGIASL 155
P + +N ++L+LD+ N ++ I P A L+ L+ G N+ P + +L
Sbjct: 127 DVTPLAGLSNLQVLYLDL--NQITNISPLAGLTNLQYLSIGNNQVNDLTPLANLSKLTTL 184
Query: 156 RACTVYDNTQINPVKPFGSHSNDTTPIDISEPSGFKEHCNQSQCSNSSKFPQIAVLAAVT 215
RA D+ +I+ + P S P+ + H +Q S+ S ++ L VT
Sbjct: 185 RA----DDNKISDISPLASL-----------PNLIEVHLKDNQISDVSPLANLSNLFIVT 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,769,141
Number of Sequences: 62578
Number of extensions: 699966
Number of successful extensions: 3530
Number of sequences better than 100.0: 992
Number of HSP's better than 100.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 693
Number of HSP's that attempted gapping in prelim test: 1983
Number of HSP's gapped (non-prelim): 1132
length of query: 589
length of database: 14,973,337
effective HSP length: 104
effective length of query: 485
effective length of database: 8,465,225
effective search space: 4105634125
effective search space used: 4105634125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)