Query 007788
Match_columns 589
No_of_seqs 451 out of 3715
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 10:31:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007788.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007788hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-56 5.2E-61 448.4 18.8 262 309-583 13-291 (299)
2 4aoj_A High affinity nerve gro 100.0 4.4E-56 1.5E-60 451.1 21.7 264 309-585 41-323 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 2.7E-56 9.2E-61 448.5 18.7 258 310-579 27-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5.2E-56 1.8E-60 444.6 19.2 261 308-582 35-301 (307)
5 4ase_A Vascular endothelial gr 100.0 1E-54 3.5E-59 444.6 16.2 275 298-582 53-348 (353)
6 3fpq_A Serine/threonine-protei 100.0 1.3E-52 4.4E-57 417.0 19.5 253 312-578 29-286 (290)
7 3hmm_A TGF-beta receptor type- 100.0 1E-52 3.6E-57 423.2 18.8 266 310-583 4-299 (303)
8 4b9d_A Serine/threonine-protei 100.0 4.8E-53 1.7E-57 429.0 16.4 256 309-579 24-281 (350)
9 4fih_A Serine/threonine-protei 100.0 6.9E-53 2.3E-57 427.2 17.4 255 309-581 74-330 (346)
10 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-52 6.4E-57 422.8 16.4 253 309-582 58-317 (336)
11 4fie_A Serine/threonine-protei 100.0 1.7E-51 5.9E-56 427.1 18.8 257 308-581 150-407 (423)
12 3hyh_A Carbon catabolite-derep 100.0 3.2E-51 1.1E-55 403.4 19.4 251 309-579 13-267 (275)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.3E-52 2.2E-56 414.0 12.9 249 309-574 32-284 (311)
14 4g31_A Eukaryotic translation 100.0 2.6E-50 8.8E-55 403.9 18.7 257 309-578 5-283 (299)
15 3ubd_A Ribosomal protein S6 ki 100.0 2.1E-51 7.3E-56 410.2 9.8 252 309-578 24-285 (304)
16 4b99_A Mitogen-activated prote 100.0 6.4E-47 2.2E-51 393.6 20.7 261 309-579 54-349 (398)
17 3uim_A Brassinosteroid insensi 100.0 7.8E-47 2.7E-51 385.8 18.8 281 298-582 19-312 (326)
18 2qkw_B Protein kinase; three-h 100.0 3E-46 1E-50 380.6 20.0 280 298-585 28-319 (321)
19 4f9c_A Cell division cycle 7-r 100.0 6E-46 2.1E-50 382.2 18.5 258 304-578 16-356 (361)
20 3v5w_A G-protein coupled recep 100.0 2.9E-45 1E-49 397.0 19.1 254 308-578 188-453 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.4E-45 8.3E-50 400.1 18.0 253 309-578 157-414 (573)
22 2psq_A Fibroblast growth facto 100.0 3.3E-44 1.1E-48 372.6 20.7 262 308-581 80-364 (370)
23 3cbl_A C-FES, proto-oncogene t 100.0 9.6E-45 3.3E-49 377.9 15.7 260 307-581 112-374 (377)
24 3kul_A Ephrin type-A receptor 100.0 3.2E-44 1.1E-48 366.2 18.9 261 308-583 48-315 (325)
25 3p86_A Serine/threonine-protei 100.0 2.3E-44 7.9E-49 364.6 17.6 269 302-582 30-299 (309)
26 2qol_A Ephrin receptor; recept 100.0 2.6E-44 8.8E-49 373.8 17.9 260 308-582 44-310 (373)
27 4hcu_A Tyrosine-protein kinase 100.0 3.5E-44 1.2E-48 355.8 17.7 257 309-582 10-267 (269)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 7.1E-44 2.4E-48 353.3 19.8 258 308-582 7-265 (268)
29 3ugc_A Tyrosine-protein kinase 100.0 3E-44 1E-48 361.3 17.1 266 309-583 10-293 (295)
30 3zgw_A Maternal embryonic leuc 100.0 3.9E-44 1.3E-48 367.9 18.1 256 308-580 9-266 (347)
31 3s95_A LIMK-1, LIM domain kina 100.0 5.6E-44 1.9E-48 362.0 18.7 260 309-583 10-284 (310)
32 3vhe_A Vascular endothelial gr 100.0 1.8E-44 6.1E-49 373.3 15.3 277 297-583 10-357 (359)
33 3soc_A Activin receptor type-2 100.0 6E-44 2.1E-48 363.8 17.7 262 308-582 23-319 (322)
34 3fxz_A Serine/threonine-protei 100.0 1.1E-43 3.6E-48 357.7 19.2 255 308-579 19-274 (297)
35 4euu_A Serine/threonine-protei 100.0 4.8E-43 1.7E-47 356.6 23.7 266 309-582 9-310 (319)
36 2c30_A Serine/threonine-protei 100.0 2E-43 6.9E-48 359.7 20.2 268 298-582 24-302 (321)
37 1qcf_A Haematopoetic cell kina 100.0 2.6E-44 8.8E-49 383.8 13.3 261 304-581 183-444 (454)
38 3gen_A Tyrosine-protein kinase 100.0 1.4E-43 4.9E-48 354.0 17.5 257 308-581 23-280 (283)
39 2nru_A Interleukin-1 receptor- 100.0 2.2E-42 7.6E-47 349.6 26.3 274 297-581 13-306 (307)
40 3poz_A Epidermal growth factor 100.0 9E-44 3.1E-48 363.3 15.8 258 309-582 15-279 (327)
41 3lb7_A RAF proto-oncogene seri 100.0 4.8E-43 1.7E-47 354.6 21.0 263 308-583 35-302 (307)
42 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-43 3.7E-48 368.5 16.5 264 308-583 70-347 (367)
43 1luf_A Muscle-specific tyrosin 100.0 1.5E-43 5.1E-48 364.0 17.4 270 302-583 40-337 (343)
44 1opk_A P150, C-ABL, proto-onco 100.0 1.7E-43 5.7E-48 381.2 18.5 259 307-581 218-478 (495)
45 1mp8_A Focal adhesion kinase 1 100.0 2.4E-43 8.1E-48 352.2 17.3 259 308-582 14-277 (281)
46 3q4u_A Activin receptor type-1 100.0 4.2E-43 1.4E-47 353.7 18.8 257 308-579 7-300 (301)
47 3tt0_A Basic fibroblast growth 100.0 4.7E-43 1.6E-47 365.8 19.9 264 307-582 67-353 (382)
48 4eqm_A Protein kinase; transfe 100.0 4.2E-43 1.4E-47 352.9 17.9 261 309-581 11-275 (294)
49 3fe3_A MAP/microtubule affinit 100.0 4.2E-43 1.4E-47 358.0 17.9 253 308-579 14-269 (328)
50 2ivs_A Proto-oncogene tyrosine 100.0 5.2E-43 1.8E-47 355.2 18.3 264 307-582 21-312 (314)
51 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-42 3.7E-47 353.9 20.6 263 311-583 33-312 (318)
52 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.5E-43 5E-48 377.6 14.4 260 306-582 181-441 (452)
53 4e5w_A Tyrosine-protein kinase 100.0 8E-43 2.7E-47 351.9 18.8 264 309-580 21-301 (302)
54 3kmu_A ILK, integrin-linked ki 100.0 1.1E-42 3.8E-47 344.9 18.9 257 309-581 10-270 (271)
55 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-42 3.8E-47 350.4 19.1 255 309-578 13-296 (298)
56 1rjb_A FL cytokine receptor; k 100.0 3.6E-43 1.2E-47 361.4 15.8 270 305-585 41-338 (344)
57 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-42 4.5E-47 370.0 20.7 255 307-582 191-446 (450)
58 3qd2_B Eukaryotic translation 100.0 1.4E-42 4.6E-47 354.8 19.8 257 308-577 5-328 (332)
59 3cc6_A Protein tyrosine kinase 100.0 1.1E-42 3.9E-47 347.2 18.4 260 308-583 11-275 (281)
60 1o6l_A RAC-beta serine/threoni 100.0 1.7E-42 5.8E-47 354.6 19.9 252 309-578 5-264 (337)
61 3t9t_A Tyrosine-protein kinase 100.0 6.9E-43 2.4E-47 345.8 16.4 256 309-581 8-264 (267)
62 3lxl_A Tyrosine-protein kinase 100.0 1.4E-42 4.8E-47 354.5 18.9 264 309-581 23-303 (327)
63 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-42 4.3E-47 352.3 18.3 265 307-582 21-308 (313)
64 3kfa_A Tyrosine-protein kinase 100.0 6.6E-43 2.3E-47 350.0 15.8 261 306-582 10-272 (288)
65 3tki_A Serine/threonine-protei 100.0 5.4E-43 1.8E-47 356.8 14.9 258 309-580 7-267 (323)
66 4f0f_A Serine/threonine-protei 100.0 5.3E-42 1.8E-46 343.4 21.8 255 309-579 19-287 (287)
67 1qpc_A LCK kinase; alpha beta 100.0 8E-43 2.7E-47 347.8 15.0 259 306-581 10-269 (279)
68 2w5a_A Serine/threonine-protei 100.0 5E-43 1.7E-47 349.3 13.0 270 308-583 5-276 (279)
69 2pvf_A Fibroblast growth facto 100.0 3.4E-42 1.2E-46 352.7 19.4 263 308-582 34-319 (334)
70 1mqb_A Ephrin type-A receptor 100.0 5.4E-42 1.9E-46 351.0 20.7 259 309-582 44-310 (333)
71 2yab_A Death-associated protei 100.0 1.9E-42 6.5E-47 357.5 17.3 253 308-579 11-277 (361)
72 2xir_A Vascular endothelial gr 100.0 1.4E-42 4.7E-47 352.4 16.0 275 298-582 16-311 (316)
73 3uc3_A Serine/threonine-protei 100.0 2.5E-42 8.7E-47 357.2 18.2 258 308-580 19-280 (361)
74 3dtc_A Mitogen-activated prote 100.0 2.4E-42 8.1E-47 342.8 17.3 255 308-579 6-271 (271)
75 1tki_A Titin; serine kinase, m 100.0 1.4E-42 4.7E-47 353.4 15.9 253 308-580 4-263 (321)
76 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-42 7.5E-47 346.7 17.2 261 308-581 23-288 (289)
77 3kex_A Receptor tyrosine-prote 100.0 5.9E-43 2E-47 357.0 13.2 259 309-583 13-278 (325)
78 3mdy_A Bone morphogenetic prot 100.0 1.1E-41 3.6E-46 349.2 22.4 269 306-584 34-334 (337)
79 3c1x_A Hepatocyte growth facto 100.0 1.6E-42 5.6E-47 359.9 16.4 259 310-582 90-356 (373)
80 3v8s_A RHO-associated protein 100.0 5.7E-43 1.9E-47 366.8 13.0 263 301-579 61-334 (410)
81 3niz_A Rhodanese family protei 100.0 5.6E-42 1.9E-46 347.5 19.8 259 308-578 20-304 (311)
82 3c0i_A Peripheral plasma membr 100.0 3.2E-42 1.1E-46 355.3 18.2 256 309-579 24-291 (351)
83 4aw2_A Serine/threonine-protei 100.0 6.5E-43 2.2E-47 369.1 13.1 270 299-579 64-343 (437)
84 3lzb_A Epidermal growth factor 100.0 2.2E-42 7.4E-47 353.0 16.6 260 309-584 15-281 (327)
85 3p1a_A MYT1 kinase, membrane-a 100.0 2.6E-42 8.9E-47 349.9 17.0 249 309-578 57-308 (311)
86 2h8h_A Proto-oncogene tyrosine 100.0 4.5E-43 1.5E-47 381.3 11.9 261 304-581 262-523 (535)
87 1p4o_A Insulin-like growth fac 100.0 3E-42 1E-46 351.1 17.2 269 302-582 18-300 (322)
88 1u59_A Tyrosine-protein kinase 100.0 4.6E-42 1.6E-46 343.9 18.2 257 309-581 9-272 (287)
89 3qup_A Tyrosine-protein kinase 100.0 2E-42 7E-47 352.6 15.7 271 302-582 16-299 (323)
90 2w1i_A JAK2; chromosomal rearr 100.0 4.8E-42 1.6E-46 350.4 18.3 267 308-583 40-324 (326)
91 2eva_A TAK1 kinase - TAB1 chim 100.0 6.6E-42 2.2E-46 346.3 19.0 256 309-582 8-264 (307)
92 2ozo_A Tyrosine-protein kinase 100.0 4.7E-42 1.6E-46 378.6 19.4 250 316-581 343-598 (613)
93 2pmi_A Negative RE, cyclin-dep 100.0 4.5E-42 1.5E-46 349.1 17.9 263 308-579 4-298 (317)
94 3op5_A Serine/threonine-protei 100.0 1.7E-42 5.7E-47 359.3 14.9 264 307-582 33-330 (364)
95 2y0a_A Death-associated protei 100.0 4E-42 1.4E-46 350.9 17.5 252 309-579 11-276 (326)
96 3f66_A Hepatocyte growth facto 100.0 8.1E-42 2.8E-46 344.0 19.1 260 309-582 25-292 (298)
97 3soa_A Calcium/calmodulin-depe 100.0 9.4E-42 3.2E-46 361.5 20.2 255 308-578 10-271 (444)
98 1fot_A TPK1 delta, CAMP-depend 100.0 7.9E-42 2.7E-46 347.0 18.7 249 309-578 6-262 (318)
99 2bdw_A Hypothetical protein K1 100.0 5.7E-42 2E-46 354.6 18.0 255 308-579 28-289 (362)
100 2buj_A Serine/threonine-protei 100.0 8.6E-42 2.9E-46 346.9 18.9 268 308-584 28-309 (317)
101 2i1m_A Macrophage colony-stimu 100.0 1.5E-42 5.2E-47 355.1 13.4 267 305-582 42-327 (333)
102 2vd5_A DMPK protein; serine/th 100.0 1.8E-42 6.2E-47 363.2 14.0 265 299-578 51-331 (412)
103 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-42 9.3E-47 355.4 15.0 253 308-578 22-284 (353)
104 4eut_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 359.5 17.5 266 309-582 9-310 (396)
105 1ob3_A PFPK5, cell division co 100.0 5.4E-42 1.8E-46 343.7 16.7 258 309-578 2-284 (288)
106 3brb_A Proto-oncogene tyrosine 100.0 8.1E-42 2.8E-46 346.5 18.1 273 301-583 26-310 (313)
107 1u5q_A Serine/threonine protei 100.0 8.9E-42 3E-46 351.2 18.1 256 308-583 53-314 (348)
108 3o0g_A Cell division protein k 100.0 1.1E-41 3.8E-46 342.0 18.3 259 309-579 2-287 (292)
109 4dc2_A Protein kinase C IOTA t 100.0 1.3E-41 4.5E-46 354.5 19.3 257 308-578 51-322 (396)
110 1kob_A Twitchin; kinase, intra 100.0 1.5E-41 5E-46 354.0 19.6 254 308-578 50-308 (387)
111 2x4f_A Myosin light chain kina 100.0 9.9E-42 3.4E-46 354.2 17.8 250 313-579 93-347 (373)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-41 3.6E-46 350.7 17.8 249 309-578 41-297 (350)
113 3dbq_A Dual specificity protei 100.0 7.8E-42 2.7E-46 351.4 16.8 256 308-579 8-278 (343)
114 3is5_A Calcium-dependent prote 100.0 1.1E-41 3.9E-46 340.8 17.5 257 309-578 22-282 (285)
115 2wqm_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46 342.3 20.1 265 309-583 32-299 (310)
116 1xjd_A Protein kinase C, theta 100.0 4.2E-42 1.4E-46 352.7 14.2 254 306-577 14-272 (345)
117 2izr_A Casein kinase I isoform 100.0 1.1E-41 3.7E-46 348.3 17.3 258 309-582 9-282 (330)
118 3pls_A Macrophage-stimulating 100.0 2.3E-41 7.8E-46 340.5 19.3 261 310-583 22-289 (298)
119 4fvq_A Tyrosine-protein kinase 100.0 4.1E-42 1.4E-46 344.4 13.7 254 308-583 7-277 (289)
120 3a62_A Ribosomal protein S6 ki 100.0 1.8E-41 6E-46 346.3 18.6 253 308-578 16-280 (327)
121 3fdn_A Serine/threonine-protei 100.0 2.2E-41 7.5E-46 337.5 18.7 254 307-580 7-263 (279)
122 3gxj_A TGF-beta receptor type- 100.0 4.5E-43 1.5E-47 353.7 6.5 260 309-583 3-299 (303)
123 1fvr_A Tyrosine-protein kinase 100.0 1.1E-41 3.8E-46 347.8 16.9 261 309-583 25-302 (327)
124 3a8x_A Protein kinase C IOTA t 100.0 2.3E-41 7.8E-46 347.7 19.0 256 309-578 9-279 (345)
125 2a19_B Interferon-induced, dou 100.0 1.4E-41 4.9E-46 339.4 17.1 252 308-583 10-276 (284)
126 2yfx_A Tyrosine-protein kinase 100.0 1.7E-41 5.7E-46 346.5 17.8 264 308-583 29-306 (327)
127 1csn_A Casein kinase-1; phosph 100.0 1.4E-41 4.7E-46 342.1 16.7 260 308-582 9-284 (298)
128 1xbb_A Tyrosine-protein kinase 100.0 1.1E-41 3.8E-46 341.9 15.9 259 306-581 13-279 (291)
129 2zmd_A Dual specificity protei 100.0 2.1E-41 7.2E-46 354.0 18.4 255 309-579 56-325 (390)
130 2h34_A Serine/threonine-protei 100.0 3.2E-41 1.1E-45 341.6 18.9 260 308-583 33-298 (309)
131 3hko_A Calcium/calmodulin-depe 100.0 1.6E-41 5.5E-46 349.2 17.0 266 304-580 21-336 (345)
132 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.7E-42 2E-46 350.4 13.5 251 309-579 9-263 (336)
133 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-41 5.4E-46 349.7 16.7 254 307-579 51-310 (349)
134 2v62_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 350.2 15.8 265 309-583 37-330 (345)
135 4fr4_A YANK1, serine/threonine 100.0 2.8E-41 9.6E-46 350.8 18.4 253 309-577 15-274 (384)
136 3a7i_A MST3 kinase, serine/thr 100.0 4E-41 1.4E-45 339.8 18.8 255 309-581 22-277 (303)
137 2i0e_A Protein kinase C-beta I 100.0 2.2E-41 7.5E-46 348.4 17.1 253 308-578 19-280 (353)
138 1b6c_B TGF-B superfamily recep 100.0 6E-41 2.1E-45 344.4 20.2 264 305-583 38-338 (342)
139 3kk8_A Calcium/calmodulin depe 100.0 6.4E-41 2.2E-45 334.9 19.8 256 308-580 5-267 (284)
140 3ork_A Serine/threonine protei 100.0 8.5E-42 2.9E-46 346.2 13.5 256 309-577 12-276 (311)
141 3g33_A Cell division protein k 100.0 5.3E-41 1.8E-45 339.8 19.1 263 308-580 8-302 (308)
142 4ejn_A RAC-alpha serine/threon 100.0 1E-41 3.6E-46 363.0 14.4 254 308-579 147-409 (446)
143 3gni_B Strad alpha; kinase fol 100.0 3.5E-41 1.2E-45 352.6 18.2 262 308-578 24-337 (389)
144 1byg_A CSK, protein (C-termina 100.0 1.7E-41 5.8E-46 338.2 14.9 254 308-582 20-274 (278)
145 2yex_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 335.3 17.1 259 308-580 6-267 (276)
146 3oz6_A Mitogen-activated prote 100.0 4.3E-41 1.5E-45 351.8 18.6 258 308-577 8-331 (388)
147 3eqc_A Dual specificity mitoge 100.0 2.4E-41 8.3E-46 350.1 16.5 259 308-580 32-330 (360)
148 2eue_A Carbon catabolite derep 100.0 4.6E-41 1.6E-45 334.5 17.8 252 309-580 13-268 (275)
149 4fl3_A Tyrosine-protein kinase 100.0 3.1E-41 1.1E-45 373.1 18.2 250 315-581 375-631 (635)
150 3g2f_A Bone morphogenetic prot 100.0 3.8E-41 1.3E-45 345.0 17.6 265 308-582 12-319 (336)
151 1nxk_A MAP kinase-activated pr 100.0 3.6E-41 1.2E-45 353.3 17.5 257 309-580 61-327 (400)
152 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-41 9.6E-46 364.3 16.6 261 308-578 184-452 (543)
153 3kn6_A Ribosomal protein S6 ki 100.0 3.1E-41 1.1E-45 344.1 15.9 250 314-579 16-275 (325)
154 3ll6_A Cyclin G-associated kin 100.0 6.6E-41 2.3E-45 343.0 17.8 261 308-582 27-309 (337)
155 3fme_A Dual specificity mitoge 100.0 3.7E-41 1.3E-45 337.6 15.5 259 308-579 6-271 (290)
156 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-40 3.7E-45 332.0 18.8 251 308-579 8-266 (277)
157 2r5t_A Serine/threonine-protei 100.0 3.5E-41 1.2E-45 349.4 15.7 244 309-570 38-285 (373)
158 1x8b_A WEE1HU, WEE1-like prote 100.0 4.3E-41 1.5E-45 336.4 15.9 252 308-579 10-284 (289)
159 2a2a_A Death-associated protei 100.0 4.5E-41 1.5E-45 342.4 16.2 252 308-578 11-276 (321)
160 3mtl_A Cell division protein k 100.0 2.2E-41 7.6E-46 345.1 13.8 260 309-580 2-287 (324)
161 3llt_A Serine/threonine kinase 100.0 8.6E-41 2.9E-45 345.9 18.1 262 299-577 25-358 (360)
162 3dls_A PAS domain-containing s 100.0 2.6E-41 8.9E-46 346.1 13.8 249 307-580 22-280 (335)
163 2y94_A 5'-AMP-activated protei 100.0 6.5E-41 2.2E-45 357.4 17.4 252 309-579 16-271 (476)
164 3ttj_A Mitogen-activated prote 100.0 2.8E-40 9.5E-45 352.8 22.3 258 308-579 61-360 (464)
165 1t4h_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 332.9 19.4 255 310-578 27-286 (290)
166 1vzo_A Ribosomal protein S6 ki 100.0 1.1E-41 3.7E-46 351.9 10.8 259 309-580 54-327 (355)
167 3an0_A Dual specificity mitoge 100.0 3.6E-41 1.2E-45 345.9 14.6 261 307-580 49-316 (340)
168 2acx_A G protein-coupled recep 100.0 3.8E-41 1.3E-45 364.2 15.4 260 307-579 182-449 (576)
169 2j0j_A Focal adhesion kinase 1 100.0 9.3E-41 3.2E-45 370.6 18.7 261 306-582 387-652 (656)
170 1u46_A ACK-1, activated CDC42 100.0 7.2E-41 2.5E-45 335.6 16.1 259 309-582 18-285 (291)
171 4agu_A Cyclin-dependent kinase 100.0 1.6E-40 5.5E-45 336.6 18.7 259 309-579 3-289 (311)
172 2rku_A Serine/threonine-protei 100.0 1.4E-40 5E-45 334.2 18.2 256 308-581 14-272 (294)
173 2vgo_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 332.4 17.9 251 309-579 14-267 (284)
174 3bhy_A Death-associated protei 100.0 1.1E-40 3.8E-45 333.0 16.5 251 309-578 5-269 (283)
175 3cok_A Serine/threonine-protei 100.0 5.9E-41 2E-45 334.2 14.4 255 308-579 10-267 (278)
176 4hgt_A Casein kinase I isoform 100.0 1E-40 3.5E-45 335.3 16.0 263 307-583 7-282 (296)
177 2jii_A Serine/threonine-protei 100.0 5.9E-41 2E-45 346.1 14.6 260 309-583 42-338 (352)
178 3byv_A Rhoptry kinase; malaria 100.0 6.8E-42 2.3E-46 356.4 7.6 250 307-577 71-362 (377)
179 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.4E-41 2.9E-45 341.6 15.4 260 307-579 32-323 (329)
180 3uzp_A CKI-delta, CKID, casein 100.0 1.4E-40 4.8E-45 334.4 16.7 262 308-583 8-282 (296)
181 2owb_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 340.3 17.5 255 308-580 40-297 (335)
182 2clq_A Mitogen-activated prote 100.0 3.5E-40 1.2E-44 331.3 19.5 256 310-578 23-282 (295)
183 2jam_A Calcium/calmodulin-depe 100.0 1.8E-40 6.1E-45 335.2 17.3 253 308-579 8-266 (304)
184 1cm8_A Phosphorylated MAP kina 100.0 2.8E-40 9.7E-45 342.6 19.1 256 308-578 24-311 (367)
185 3i6u_A CDS1, serine/threonine- 100.0 1.5E-40 5.3E-45 350.8 17.4 258 307-582 133-407 (419)
186 1ua2_A CAK, cell division prot 100.0 1.8E-40 6E-45 341.7 17.3 262 307-580 8-297 (346)
187 3mi9_A Cell division protein k 100.0 4.2E-40 1.4E-44 339.5 20.1 262 309-580 17-317 (351)
188 3eb0_A Putative uncharacterize 100.0 9.3E-41 3.2E-45 348.6 15.1 261 305-578 3-325 (383)
189 3pg1_A Mitogen-activated prote 100.0 1.1E-40 3.8E-45 345.3 15.4 271 298-579 11-321 (362)
190 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-40 1.1E-44 342.2 19.0 254 307-581 63-339 (365)
191 3q60_A ROP5B; pseudokinase, tr 100.0 3.5E-41 1.2E-45 350.3 11.4 257 308-578 61-356 (371)
192 2qr7_A Ribosomal protein S6 ki 100.0 7.5E-41 2.5E-45 343.4 13.6 254 308-579 21-282 (342)
193 2ac3_A MAP kinase-interacting 100.0 1.9E-40 6.6E-45 336.8 16.1 257 309-579 12-300 (316)
194 2x7f_A TRAF2 and NCK-interacti 100.0 1E-40 3.6E-45 340.3 14.1 264 302-579 17-291 (326)
195 2h6d_A 5'-AMP-activated protei 100.0 4.3E-40 1.5E-44 327.4 18.0 251 309-578 11-265 (276)
196 3nsz_A CK II alpha, casein kin 100.0 6.1E-40 2.1E-44 335.2 19.2 253 309-579 36-324 (330)
197 3rp9_A Mitogen-activated prote 100.0 8.3E-40 2.8E-44 349.7 21.1 261 309-579 53-401 (458)
198 4aaa_A Cyclin-dependent kinase 100.0 3.7E-40 1.3E-44 337.2 17.5 260 309-580 25-312 (331)
199 1zy4_A Serine/threonine-protei 100.0 6E-40 2.1E-44 330.5 18.5 258 308-579 5-288 (303)
200 2wtk_C Serine/threonine-protei 100.0 1.1E-39 3.6E-44 329.5 20.3 259 308-580 4-269 (305)
201 3com_A Serine/threonine-protei 100.0 8.3E-40 2.8E-44 331.8 19.5 257 307-580 27-284 (314)
202 3mwu_A Calmodulin-domain prote 100.0 4.2E-40 1.4E-44 354.5 18.4 254 308-579 21-281 (486)
203 3qyz_A Mitogen-activated prote 100.0 3.1E-40 1.1E-44 342.3 16.5 261 308-579 26-318 (364)
204 2y7j_A Phosphorylase B kinase 100.0 4.2E-40 1.4E-44 341.2 17.5 258 304-578 89-363 (365)
205 3lm5_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 338.1 14.9 261 305-578 24-291 (327)
206 2j7t_A Serine/threonine-protei 100.0 2.4E-40 8.2E-45 333.8 14.6 255 308-578 18-279 (302)
207 3e3p_A Protein kinase, putativ 100.0 1.4E-39 4.9E-44 336.6 20.2 269 302-580 16-320 (360)
208 3pfq_A PKC-B, PKC-beta, protei 100.0 6.3E-40 2.2E-44 365.0 18.8 253 307-577 339-600 (674)
209 2xrw_A Mitogen-activated prote 100.0 9.8E-40 3.4E-44 339.3 19.0 257 308-578 24-322 (371)
210 2vwi_A Serine/threonine-protei 100.0 6.7E-41 2.3E-45 337.8 9.9 265 306-578 12-291 (303)
211 3q5i_A Protein kinase; CDPK, m 100.0 6.1E-40 2.1E-44 354.8 18.0 254 308-579 35-306 (504)
212 3lij_A Calcium/calmodulin depe 100.0 6.9E-40 2.3E-44 353.5 18.3 254 308-579 36-296 (494)
213 3aln_A Dual specificity mitoge 100.0 2.5E-40 8.5E-45 337.8 13.9 262 309-580 22-291 (327)
214 3nyv_A Calmodulin-domain prote 100.0 2.5E-40 8.7E-45 356.2 14.3 254 308-579 25-286 (484)
215 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-39 3.8E-44 336.5 18.0 261 308-579 10-310 (353)
216 1j1b_A Glycogen synthase kinas 100.0 5.1E-40 1.7E-44 346.9 15.5 257 309-578 54-340 (420)
217 3kvw_A DYRK2, dual specificity 100.0 2E-39 6.9E-44 343.2 20.1 258 308-581 96-415 (429)
218 2pml_X PFPK7, Ser/Thr protein 100.0 4.9E-40 1.7E-44 338.5 14.8 257 308-580 30-328 (348)
219 2r3i_A Cell division protein k 100.0 1.2E-39 4.1E-44 328.2 17.3 260 309-579 3-288 (299)
220 1phk_A Phosphorylase kinase; g 100.0 1.6E-39 5.3E-44 327.2 17.7 255 308-579 16-288 (298)
221 3n9x_A Phosphotransferase; mal 100.0 1.9E-39 6.6E-44 343.9 19.2 262 308-579 25-366 (432)
222 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-40 5.5E-45 337.8 9.7 265 302-583 26-304 (319)
223 3cek_A Dual specificity protei 100.0 1.8E-39 6.1E-44 329.3 16.7 260 305-580 24-298 (313)
224 2fst_X Mitogen-activated prote 100.0 2.9E-39 1E-43 334.8 18.5 256 308-578 28-315 (367)
225 3sv0_A Casein kinase I-like; t 100.0 2.5E-39 8.4E-44 345.8 18.2 260 308-581 6-278 (483)
226 3rgf_A Cyclin-dependent kinase 100.0 2.5E-39 8.4E-44 340.4 17.7 264 309-581 20-340 (405)
227 1wak_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44 341.1 15.4 255 309-577 37-394 (397)
228 4e7w_A Glycogen synthase kinas 100.0 9.9E-40 3.4E-44 341.9 14.1 257 309-578 40-325 (394)
229 1blx_A Cyclin-dependent kinase 100.0 2.3E-39 7.8E-44 330.3 16.4 262 307-578 9-300 (326)
230 2i6l_A Mitogen-activated prote 100.0 1.7E-39 5.8E-44 330.1 15.2 259 309-579 11-310 (320)
231 2ycf_A Serine/threonine-protei 100.0 2.7E-39 9.4E-44 329.3 16.7 253 308-578 9-278 (322)
232 1z57_A Dual specificity protei 100.0 7.2E-39 2.5E-43 328.0 18.7 253 309-578 14-332 (339)
233 4exu_A Mitogen-activated prote 100.0 3.6E-39 1.2E-43 335.1 16.6 255 308-578 41-327 (371)
234 2wei_A Calmodulin-domain prote 100.0 3.7E-39 1.3E-43 322.8 15.5 255 307-579 20-281 (287)
235 2rio_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 341.1 16.5 254 311-578 17-299 (434)
236 3coi_A Mitogen-activated prote 100.0 1.2E-38 4E-43 329.0 19.1 254 309-578 24-309 (353)
237 3fhr_A MAP kinase-activated pr 100.0 5.2E-39 1.8E-43 329.3 15.8 258 308-580 27-293 (336)
238 1q8y_A SR protein kinase; tran 100.0 6.2E-39 2.1E-43 333.4 16.5 258 309-580 19-339 (373)
239 2vx3_A Dual specificity tyrosi 100.0 2.7E-38 9.2E-43 329.9 21.3 258 307-578 52-376 (382)
240 3a99_A Proto-oncogene serine/t 100.0 1.8E-39 6.1E-44 330.5 10.3 251 303-579 37-298 (320)
241 2iwi_A Serine/threonine-protei 100.0 6E-39 2.1E-43 325.2 13.4 250 305-580 27-289 (312)
242 2eu9_A Dual specificity protei 100.0 4.6E-38 1.6E-42 324.3 20.2 254 309-579 19-338 (355)
243 2dyl_A Dual specificity mitoge 100.0 1.7E-38 5.7E-43 322.7 16.5 255 308-578 24-287 (318)
244 3p23_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 332.9 15.3 250 308-577 23-286 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 5E-38 1.7E-42 343.1 16.1 257 309-573 14-296 (676)
246 3uqc_A Probable conserved tran 100.0 1.4E-37 4.9E-42 311.0 12.9 232 309-583 31-267 (286)
247 2pzi_A Probable serine/threoni 100.0 2.5E-37 8.7E-42 346.0 15.9 240 309-578 80-325 (681)
248 3m2w_A MAP kinase-activated pr 100.0 9.3E-37 3.2E-41 307.3 15.3 234 309-580 17-262 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 2.1E-37 7.2E-42 326.2 9.9 248 307-575 76-364 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.2E-35 3.9E-40 304.4 13.9 244 308-577 19-334 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.5E-29 5E-34 275.7 3.3 187 316-518 241-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.6E-26 5.4E-31 250.4 6.0 184 313-518 340-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.7E-23 5.8E-28 208.0 10.2 155 301-492 82-253 (282)
254 1zth_A RIO1 serine protein kin 99.8 3.9E-19 1.3E-23 174.3 10.7 146 302-467 40-219 (258)
255 3rgz_A Protein brassinosteroid 99.8 9.3E-19 3.2E-23 198.5 10.1 113 39-152 631-745 (768)
256 2v70_A SLIT-2, SLIT homolog 2 99.7 1.1E-17 3.7E-22 159.9 7.9 141 17-158 35-177 (220)
257 2v9t_B SLIT homolog 2 protein 99.7 2.3E-17 7.9E-22 157.6 8.4 142 15-158 33-176 (220)
258 2wfh_A SLIT homolog 2 protein 99.7 5.2E-17 1.8E-21 151.7 7.5 120 39-159 30-151 (193)
259 4gyi_A RIO2 kinase; protein ki 99.7 6E-17 2E-21 165.1 6.0 151 302-467 88-265 (397)
260 3e6j_A Variable lymphocyte rec 99.6 5.5E-16 1.9E-20 149.0 11.5 134 15-151 41-176 (229)
261 1w8a_A SLIT protein; signaling 99.6 1.6E-16 5.6E-21 148.3 6.9 117 40-156 29-148 (192)
262 3m19_A Variable lymphocyte rec 99.6 8.3E-16 2.9E-20 149.9 10.1 121 37-157 80-203 (251)
263 1ogq_A PGIP-2, polygalacturona 99.6 6.9E-16 2.3E-20 155.7 9.0 111 39-152 197-309 (313)
264 1p9a_G Platelet glycoprotein I 99.6 1E-15 3.5E-20 152.6 9.5 121 38-159 98-220 (290)
265 3rgz_A Protein brassinosteroid 99.6 1.6E-15 5.6E-20 171.8 11.7 83 62-144 630-714 (768)
266 2o6s_A Variable lymphocyte rec 99.6 4.6E-15 1.6E-19 140.2 11.1 135 15-151 29-165 (208)
267 3rfs_A Internalin B, repeat mo 99.6 6.1E-15 2.1E-19 145.6 12.1 114 38-151 107-222 (272)
268 1w8a_A SLIT protein; signaling 99.6 2.1E-15 7.2E-20 140.7 7.9 115 15-130 30-144 (192)
269 4g8a_A TOLL-like receptor 4; l 99.6 1.7E-15 5.7E-20 167.7 8.2 123 37-159 466-592 (635)
270 1ogq_A PGIP-2, polygalacturona 99.6 2.7E-15 9.2E-20 151.3 8.7 121 14-136 50-173 (313)
271 2o6q_A Variable lymphocyte rec 99.6 1.3E-14 4.5E-19 143.0 12.2 115 37-151 106-222 (270)
272 2o6r_A Variable lymphocyte rec 99.6 8.2E-15 2.8E-19 134.7 10.0 113 39-151 27-141 (177)
273 2xot_A Amphoterin-induced prot 99.6 6.8E-15 2.3E-19 151.5 10.4 117 37-154 85-209 (361)
274 1ozn_A Reticulon 4 receptor; N 99.5 1E-14 3.6E-19 144.8 10.0 118 37-154 126-245 (285)
275 3g39_A Variable lymphocyte rec 99.5 1.6E-14 5.4E-19 131.9 9.7 89 40-128 30-118 (170)
276 3zyj_A Leucine-rich repeat-con 99.5 1.3E-14 4.5E-19 153.5 10.0 121 37-159 182-304 (440)
277 4fcg_A Uncharacterized protein 99.5 2.7E-14 9.3E-19 144.9 11.3 98 39-137 205-302 (328)
278 2z66_A Variable lymphocyte rec 99.5 8.3E-15 2.8E-19 147.1 7.1 120 37-156 147-270 (306)
279 3vq2_A TLR4, TOLL-like recepto 99.5 1.2E-14 4E-19 160.4 8.7 122 37-159 445-570 (606)
280 3v47_A TOLL-like receptor 5B a 99.5 2.1E-14 7.1E-19 152.6 10.2 115 37-151 296-412 (455)
281 2r9u_A Variable lymphocyte rec 99.5 3.3E-14 1.1E-18 130.3 9.8 87 40-126 33-119 (174)
282 3j0a_A TOLL-like receptor 5; m 99.5 3.7E-15 1.3E-19 170.6 4.0 117 39-158 450-571 (844)
283 3g39_A Variable lymphocyte rec 99.5 4.6E-14 1.6E-18 128.7 9.3 112 42-156 11-125 (170)
284 2v70_A SLIT-2, SLIT homolog 2 99.5 5.4E-14 1.9E-18 134.1 10.1 123 5-129 37-170 (220)
285 3zyi_A Leucine-rich repeat-con 99.5 2.2E-14 7.6E-19 152.3 8.0 119 37-157 193-313 (452)
286 3m19_A Variable lymphocyte rec 99.5 6.1E-14 2.1E-18 136.6 10.4 97 39-135 58-154 (251)
287 2je0_A Acidic leucine-rich nuc 99.5 6.7E-14 2.3E-18 124.6 7.7 89 39-129 41-130 (149)
288 3t6q_A CD180 antigen; protein- 99.5 5.7E-14 1.9E-18 154.9 8.7 121 37-158 446-571 (606)
289 2ifg_A High affinity nerve gro 99.5 6.6E-14 2.3E-18 143.2 7.8 110 45-156 13-125 (347)
290 2wfh_A SLIT homolog 2 protein 99.4 2E-13 6.7E-18 127.3 9.9 110 15-127 32-141 (193)
291 2ell_A Acidic leucine-rich nuc 99.4 1.7E-13 5.9E-18 124.6 9.3 89 39-129 48-137 (168)
292 3e6j_A Variable lymphocyte rec 99.4 1.9E-13 6.6E-18 131.1 10.0 105 39-144 39-145 (229)
293 4eco_A Uncharacterized protein 99.4 5.5E-14 1.9E-18 155.7 7.0 84 51-135 194-298 (636)
294 2r9u_A Variable lymphocyte rec 99.4 1.9E-13 6.4E-18 125.2 9.2 112 42-156 14-128 (174)
295 2o6r_A Variable lymphocyte rec 99.4 2E-13 6.7E-18 125.4 9.1 113 15-129 29-141 (177)
296 4fcg_A Uncharacterized protein 99.4 1.7E-13 5.7E-18 139.0 9.2 96 39-136 149-253 (328)
297 2v9t_B SLIT homolog 2 protein 99.4 2.9E-13 1E-17 128.9 10.0 107 19-127 61-167 (220)
298 4b8c_D Glucose-repressible alc 99.4 9.7E-14 3.3E-18 155.6 7.2 102 25-135 238-339 (727)
299 2z62_A TOLL-like receptor 4, v 99.4 2.9E-13 9.8E-18 133.7 9.5 98 38-135 74-172 (276)
300 2z63_A TOLL-like receptor 4, v 99.4 2.2E-13 7.6E-18 148.9 9.6 118 37-154 418-538 (570)
301 4g8a_A TOLL-like receptor 4; l 99.4 2E-13 6.9E-18 150.9 9.3 123 12-136 50-173 (635)
302 2id5_A Lingo-1, leucine rich r 99.4 1.3E-13 4.5E-18 147.4 7.2 127 23-155 213-341 (477)
303 4ecn_A Leucine-rich repeat pro 99.4 8.3E-14 2.8E-18 157.9 5.7 81 56-136 440-541 (876)
304 1ziw_A TOLL-like receptor 3; i 99.4 4.9E-13 1.7E-17 149.5 11.9 121 37-158 501-634 (680)
305 3rfs_A Internalin B, repeat mo 99.4 7.6E-13 2.6E-17 130.5 11.6 94 39-132 84-177 (272)
306 1dce_A Protein (RAB geranylger 99.4 5E-13 1.7E-17 145.3 10.4 91 41-136 442-533 (567)
307 2je0_A Acidic leucine-rich nuc 99.4 6.1E-13 2.1E-17 118.3 8.8 96 39-136 16-113 (149)
308 2xot_A Amphoterin-induced prot 99.4 4E-13 1.4E-17 138.2 8.4 93 38-130 62-154 (361)
309 2o6s_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 123.4 10.8 94 37-130 73-166 (208)
310 2o6q_A Variable lymphocyte rec 99.4 1.2E-12 4.2E-17 128.8 11.2 100 37-136 58-157 (270)
311 4eco_A Uncharacterized protein 99.4 2.9E-13 9.9E-18 149.9 7.4 117 20-144 193-340 (636)
312 1p9a_G Platelet glycoprotein I 99.4 9.6E-13 3.3E-17 131.0 10.4 95 38-135 53-147 (290)
313 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 5.2E-13 1.8E-17 145.8 8.8 115 37-155 400-518 (562)
314 2z7x_B TOLL-like receptor 1, v 99.4 5.4E-13 1.8E-17 144.2 8.8 116 36-155 370-489 (520)
315 3oja_A Leucine-rich immune mol 99.4 3.5E-13 1.2E-17 144.2 7.2 107 39-149 143-252 (487)
316 1ozn_A Reticulon 4 receptor; N 99.4 1.5E-12 5.2E-17 129.1 10.4 98 39-136 79-177 (285)
317 2z62_A TOLL-like receptor 4, v 99.4 1.7E-12 5.7E-17 128.2 10.6 131 12-144 26-159 (276)
318 4ezg_A Putative uncharacterize 99.4 1.7E-12 5.7E-17 121.4 9.7 95 39-136 65-159 (197)
319 2ifg_A High affinity nerve gro 99.3 9.9E-13 3.4E-17 134.4 8.3 95 25-127 23-118 (347)
320 4ecn_A Leucine-rich repeat pro 99.3 5.5E-13 1.9E-17 151.1 6.6 117 20-144 435-583 (876)
321 2z81_A CD282 antigen, TOLL-lik 99.3 3.3E-12 1.1E-16 138.9 12.3 112 36-151 383-514 (549)
322 1dce_A Protein (RAB geranylger 99.3 2.4E-12 8.2E-17 139.9 11.0 92 36-130 459-551 (567)
323 2ell_A Acidic leucine-rich nuc 99.3 1.5E-12 5.1E-17 118.3 7.8 96 39-136 23-120 (168)
324 4b8c_D Glucose-repressible alc 99.3 1E-12 3.4E-17 147.4 8.0 106 37-146 221-328 (727)
325 2z66_A Variable lymphocyte rec 99.3 2.5E-12 8.5E-17 128.9 9.4 97 39-135 100-198 (306)
326 3vq2_A TLR4, TOLL-like recepto 99.3 2.2E-12 7.4E-17 142.2 9.6 121 14-136 32-153 (606)
327 3v47_A TOLL-like receptor 5B a 99.3 2.9E-12 9.8E-17 136.0 9.9 94 37-130 320-413 (455)
328 3oja_B Anopheles plasmodium-re 99.3 3.2E-12 1.1E-16 140.5 10.4 116 24-144 64-181 (597)
329 2ft3_A Biglycan; proteoglycan, 99.3 2.9E-12 1E-16 130.0 8.7 93 40-133 193-285 (332)
330 2id5_A Lingo-1, leucine rich r 99.3 2.7E-12 9.2E-17 137.1 7.9 120 15-136 33-152 (477)
331 1a9n_A U2A', U2A'; complex (nu 99.3 8.5E-12 2.9E-16 114.3 9.9 88 39-130 41-130 (176)
332 3o6n_A APL1; leucine-rich repe 99.3 7.3E-12 2.5E-16 130.1 10.3 115 25-144 59-175 (390)
333 1wwl_A Monocyte differentiatio 99.3 1.7E-12 6E-17 130.6 5.0 88 39-127 94-188 (312)
334 1wwl_A Monocyte differentiatio 99.3 2.1E-12 7E-17 130.0 5.5 86 39-125 120-214 (312)
335 3oja_B Anopheles plasmodium-re 99.3 8.5E-12 2.9E-16 137.2 10.8 116 18-135 79-194 (597)
336 1xku_A Decorin; proteoglycan, 99.3 8.8E-12 3E-16 126.4 9.9 92 39-134 170-261 (330)
337 4ezg_A Putative uncharacterize 99.2 1.7E-11 5.7E-16 114.5 10.0 103 39-145 43-147 (197)
338 1ziw_A TOLL-like receptor 3; i 99.2 7.6E-12 2.6E-16 139.8 8.9 96 38-133 47-142 (680)
339 3o53_A Protein LRIM1, AGAP0063 99.2 5.3E-12 1.8E-16 127.3 6.8 109 38-150 142-253 (317)
340 3t6q_A CD180 antigen; protein- 99.2 7.1E-12 2.4E-16 138.0 8.0 112 14-127 33-144 (606)
341 3tm0_A Aminoglycoside 3'-phosp 99.2 2.4E-11 8.1E-16 118.9 9.6 147 306-465 11-212 (263)
342 3j0a_A TOLL-like receptor 5; m 99.2 1.7E-11 5.7E-16 140.3 9.9 98 38-135 71-171 (844)
343 2z63_A TOLL-like receptor 4, v 99.2 1.5E-11 5.3E-16 134.2 9.1 95 37-131 442-537 (570)
344 3oja_A Leucine-rich immune mol 99.2 9.4E-12 3.2E-16 133.1 7.0 125 6-135 126-261 (487)
345 3zyi_A Leucine-rich repeat-con 99.2 1.7E-11 5.7E-16 130.1 8.6 98 40-137 75-172 (452)
346 3o6n_A APL1; leucine-rich repe 99.2 3.4E-11 1.2E-15 125.0 10.7 99 36-135 89-188 (390)
347 2z81_A CD282 antigen, TOLL-lik 99.2 2.3E-11 7.8E-16 132.3 8.6 96 40-135 26-122 (549)
348 2z80_A TOLL-like receptor 2, v 99.2 1.1E-11 3.8E-16 126.9 5.8 106 39-144 51-159 (353)
349 2xwt_C Thyrotropin receptor; s 99.2 1.2E-11 4E-16 119.3 5.5 86 41-126 32-119 (239)
350 1a9n_A U2A', U2A'; complex (nu 99.2 3.3E-11 1.1E-15 110.4 8.2 103 38-145 17-124 (176)
351 4glp_A Monocyte differentiatio 99.2 1.6E-11 5.5E-16 123.3 6.6 97 38-135 143-247 (310)
352 2z7x_B TOLL-like receptor 1, v 99.2 2.3E-11 8E-16 131.3 8.1 85 39-126 44-129 (520)
353 3zyj_A Leucine-rich repeat-con 99.2 3E-11 1E-15 127.6 8.6 97 40-136 64-160 (440)
354 1ds9_A Outer arm dynein; leuci 99.2 9.2E-13 3.1E-17 123.3 -2.9 103 38-145 46-151 (198)
355 2z80_A TOLL-like receptor 2, v 99.2 3.7E-11 1.3E-15 123.0 8.9 119 15-136 53-174 (353)
356 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 4.9E-11 1.7E-15 130.1 9.4 95 40-137 52-147 (562)
357 1xku_A Decorin; proteoglycan, 99.2 9.7E-11 3.3E-15 118.6 10.8 94 40-136 52-145 (330)
358 1ds9_A Outer arm dynein; leuci 99.1 1.7E-12 5.8E-17 121.5 -2.4 91 36-130 66-158 (198)
359 1h6t_A Internalin B; cell adhe 99.1 1.3E-10 4.4E-15 115.6 10.9 84 38-127 66-149 (291)
360 4glp_A Monocyte differentiatio 99.1 1.6E-11 5.6E-16 123.3 4.0 123 18-144 149-282 (310)
361 3cvr_A Invasion plasmid antige 99.1 4.7E-11 1.6E-15 129.3 7.7 88 39-135 159-253 (571)
362 3o53_A Protein LRIM1, AGAP0063 99.1 6.5E-11 2.2E-15 119.3 8.1 112 20-136 150-262 (317)
363 2ft3_A Biglycan; proteoglycan, 99.1 1.4E-10 4.8E-15 117.6 9.6 94 40-136 54-147 (332)
364 1nd4_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4E-15 113.5 8.0 130 318-465 29-213 (264)
365 1h6u_A Internalin H; cell adhe 99.1 1.5E-10 5E-15 116.2 8.3 87 37-129 104-190 (308)
366 2xwt_C Thyrotropin receptor; s 99.1 8.4E-11 2.9E-15 113.3 5.9 119 14-136 31-155 (239)
367 4fmz_A Internalin; leucine ric 99.1 4.6E-10 1.6E-14 114.4 11.5 103 38-146 219-323 (347)
368 1xeu_A Internalin C; cellular 99.1 2.5E-10 8.7E-15 111.6 9.2 99 38-145 61-161 (263)
369 3dxp_A Putative acyl-COA dehyd 99.1 3.7E-10 1.3E-14 115.8 10.6 147 313-466 42-248 (359)
370 3cvr_A Invasion plasmid antige 99.1 2.3E-10 7.9E-15 123.9 9.3 73 41-125 121-193 (571)
371 1h6t_A Internalin B; cell adhe 99.1 3.1E-10 1.1E-14 112.8 9.5 100 37-144 87-188 (291)
372 1h6u_A Internalin H; cell adhe 99.1 5.1E-10 1.7E-14 112.2 11.1 85 39-129 62-146 (308)
373 1m9s_A Internalin B; cell inva 99.1 4.8E-10 1.6E-14 122.6 11.8 86 38-129 85-170 (605)
374 3g06_A SSPH2 (leucine-rich rep 99.1 2.6E-10 8.9E-15 124.9 9.3 89 39-136 220-308 (622)
375 1xeu_A Internalin C; cellular 99.0 5.3E-10 1.8E-14 109.3 10.6 99 37-144 38-138 (263)
376 2ca6_A RAN GTPase-activating p 99.0 1.2E-10 4.2E-15 120.6 5.3 88 40-127 159-259 (386)
377 1m9s_A Internalin B; cell inva 99.0 5E-10 1.7E-14 122.5 9.9 101 36-144 105-207 (605)
378 2ast_B S-phase kinase-associat 99.0 8.8E-11 3E-15 119.1 2.9 99 37-135 115-221 (336)
379 1o6v_A Internalin A; bacterial 99.0 5E-10 1.7E-14 119.2 8.7 83 39-127 264-346 (466)
380 4fmz_A Internalin; leucine ric 99.0 2.2E-09 7.4E-14 109.4 12.2 82 39-126 198-279 (347)
381 2ast_B S-phase kinase-associat 99.0 1.7E-10 5.7E-15 117.1 2.9 124 20-145 124-258 (336)
382 3bz5_A Internalin-J, INLJ; leu 99.0 1.7E-09 5.7E-14 114.6 10.7 87 39-134 169-255 (457)
383 3goz_A Leucine-rich repeat-con 99.0 4.1E-10 1.4E-14 115.7 5.6 95 39-133 21-130 (362)
384 1jl5_A Outer protein YOPM; leu 98.9 6.6E-10 2.3E-14 117.6 6.7 80 41-133 298-380 (454)
385 2ca6_A RAN GTPase-activating p 98.9 3.6E-10 1.2E-14 117.1 4.6 133 14-146 159-315 (386)
386 1jl5_A Outer protein YOPM; leu 98.9 1.8E-09 6.3E-14 114.2 9.1 77 40-126 111-187 (454)
387 1o6v_A Internalin A; bacterial 98.9 3.6E-09 1.2E-13 112.4 11.4 101 37-145 240-342 (466)
388 3g06_A SSPH2 (leucine-rich rep 98.9 4E-09 1.4E-13 115.5 11.0 73 64-145 221-295 (622)
389 4ay9_X Follicle-stimulating ho 98.9 8.9E-10 3E-14 112.6 5.2 94 39-132 29-124 (350)
390 3bz5_A Internalin-J, INLJ; leu 98.9 3.4E-09 1.2E-13 112.2 9.2 86 38-129 189-281 (457)
391 3sg8_A APH(2'')-ID; antibiotic 98.8 1.6E-09 5.6E-14 108.3 3.7 192 314-520 25-289 (304)
392 3goz_A Leucine-rich repeat-con 98.8 3.1E-09 1.1E-13 109.0 5.2 129 4-132 2-158 (362)
393 3rw6_A Nuclear RNA export fact 98.7 6.8E-09 2.3E-13 100.7 5.7 83 45-129 148-237 (267)
394 4ay9_X Follicle-stimulating ho 98.7 6.7E-09 2.3E-13 106.0 5.3 119 14-134 30-151 (350)
395 3rw6_A Nuclear RNA export fact 98.7 3.7E-09 1.3E-13 102.5 1.7 80 37-118 167-257 (267)
396 3r70_A Aminoglycoside phosphot 98.7 1.2E-07 4E-12 95.5 12.1 138 310-466 38-237 (320)
397 1z7x_W Ribonuclease inhibitor; 98.7 8.9E-09 3E-13 109.1 3.9 88 39-126 55-156 (461)
398 1z7x_W Ribonuclease inhibitor; 98.6 4.1E-09 1.4E-13 111.7 0.8 94 39-132 255-361 (461)
399 3un9_A NLR family member X1; l 98.6 1.3E-08 4.5E-13 104.5 3.3 112 15-127 102-226 (372)
400 3d1u_A Putative fructosamine-3 98.5 2.8E-07 9.7E-12 91.0 10.3 144 313-465 19-215 (288)
401 3tdw_A Gentamicin resistance p 98.5 9.5E-07 3.2E-11 88.1 12.2 139 314-466 24-224 (306)
402 3un9_A NLR family member X1; l 98.5 4.7E-08 1.6E-12 100.4 2.6 116 18-134 130-261 (372)
403 4gkh_A Aminoglycoside 3'-phosp 98.4 1.7E-06 6E-11 84.4 12.3 136 316-465 31-222 (272)
404 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.1E-06 7.2E-11 87.7 10.2 147 312-467 44-244 (362)
405 3sb4_A Hypothetical leucine ri 98.2 2.2E-06 7.4E-11 86.4 8.7 95 38-134 224-319 (329)
406 3ogk_B Coronatine-insensitive 98.1 5.9E-07 2E-11 98.2 1.6 89 39-127 402-503 (592)
407 1io0_A Tropomodulin; LRR prote 98.1 1E-06 3.5E-11 80.8 2.5 93 35-127 31-138 (185)
408 3ats_A Putative uncharacterize 98.1 4.5E-06 1.6E-10 85.0 7.5 83 315-397 26-122 (357)
409 1io0_A Tropomodulin; LRR prote 98.1 1.2E-06 4E-11 80.5 2.7 87 39-125 64-164 (185)
410 3ogk_B Coronatine-insensitive 98.1 8.5E-07 2.9E-11 96.9 1.8 92 36-127 432-528 (592)
411 2ra8_A Uncharacterized protein 97.9 4.6E-06 1.6E-10 84.9 3.3 64 62-125 250-320 (362)
412 2olc_A MTR kinase, methylthior 97.8 5.1E-05 1.7E-09 78.4 9.8 76 314-393 35-120 (397)
413 2q83_A YTAA protein; 2635576, 97.8 0.00017 5.7E-09 72.6 13.3 144 315-465 38-251 (346)
414 2p1m_B Transport inhibitor res 97.8 3.7E-06 1.3E-10 91.8 0.0 92 37-129 394-498 (594)
415 3sb4_A Hypothetical leucine ri 97.8 3E-05 1E-09 77.9 6.7 88 25-119 240-328 (329)
416 3jr1_A Putative fructosamine-3 97.7 0.00018 6.2E-09 71.4 11.8 140 314-462 41-232 (312)
417 3f7w_A Putative fructosamine-3 97.7 0.00018 6.2E-09 70.7 10.5 78 311-395 17-97 (288)
418 2p1m_B Transport inhibitor res 97.6 1.7E-05 5.7E-10 86.6 2.0 86 38-123 103-195 (594)
419 2pyw_A Uncharacterized protein 97.5 0.00034 1.2E-08 72.8 10.2 78 436-514 232-312 (420)
420 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 58.3 6.1 36 89-124 32-67 (130)
421 3dxq_A Choline/ethanolamine ki 97.1 0.00067 2.3E-08 67.0 7.4 71 314-395 23-95 (301)
422 2ra8_A Uncharacterized protein 97.1 6.4E-05 2.2E-09 76.4 -0.1 83 39-123 251-341 (362)
423 3e4g_A ATP synthase subunit S, 97.1 0.00014 4.9E-09 65.2 2.1 84 40-123 61-150 (176)
424 2ppq_A HSK, HK, homoserine kin 97.1 0.0029 9.8E-08 63.0 11.8 163 299-465 7-216 (322)
425 1zyl_A Hypothetical protein YI 97.1 0.0077 2.6E-07 59.9 14.9 162 299-466 11-223 (328)
426 3rfe_A Platelet glycoprotein I 97.1 0.00089 3E-08 57.1 6.4 65 92-158 12-79 (130)
427 2yle_A Protein spire homolog 1 97.0 0.0032 1.1E-07 57.9 9.4 103 393-517 33-135 (229)
428 4fdw_A Leucine rich hypothetic 96.9 0.00094 3.2E-08 68.9 6.6 90 40-132 248-342 (401)
429 3csv_A Aminoglycoside phosphot 96.9 0.0073 2.5E-07 60.3 12.6 31 436-466 183-217 (333)
430 1nw1_A Choline kinase (49.2 KD 96.9 0.0027 9.4E-08 66.0 9.3 73 314-395 78-159 (429)
431 3feg_A Choline/ethanolamine ki 96.8 0.0033 1.1E-07 64.0 9.1 142 315-465 56-253 (379)
432 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00059 2E-08 62.4 2.7 87 38-124 39-138 (197)
433 3i1a_A Spectinomycin phosphotr 96.4 0.018 6.2E-07 57.7 11.1 32 435-466 205-236 (339)
434 3c5i_A Choline kinase; choline 96.3 0.0059 2E-07 62.0 7.0 73 315-395 39-121 (369)
435 4fdw_A Leucine rich hypothetic 96.2 0.0046 1.6E-07 63.6 5.7 95 37-134 268-367 (401)
436 2qg7_A Ethanolamine kinase PV0 96.1 0.025 8.6E-07 59.1 11.1 73 315-395 114-188 (458)
437 1pgv_A TMD-1, tropomodulin TMD 96.1 0.0016 5.6E-08 59.5 1.4 87 39-125 69-170 (197)
438 3f2s_A CK, chetk-alpha, cholin 95.2 0.07 2.4E-06 54.5 9.7 144 315-465 58-279 (401)
439 4fs7_A Uncharacterized protein 94.6 0.039 1.3E-06 56.4 6.2 79 39-120 296-374 (394)
440 3e4g_A ATP synthase subunit S, 93.9 0.027 9.2E-07 50.3 2.7 62 64-125 61-128 (176)
441 4gt6_A Cell surface protein; l 93.8 0.15 5.1E-06 52.0 8.6 79 39-120 264-342 (394)
442 3mes_A Choline kinase; malaria 93.4 0.18 6.2E-06 51.9 8.4 74 314-395 75-157 (424)
443 4h09_A Hypothetical leucine ri 93.1 0.14 4.8E-06 51.8 7.0 83 38-122 238-320 (379)
444 4gt6_A Cell surface protein; l 93.0 0.099 3.4E-06 53.4 5.6 86 37-125 285-370 (394)
445 2ks1_B Epidermal growth factor 91.3 0.35 1.2E-05 31.8 4.6 12 210-221 13-24 (44)
446 4fs7_A Uncharacterized protein 90.9 0.2 6.8E-06 51.1 5.1 78 36-117 316-393 (394)
447 4h09_A Hypothetical leucine ri 90.8 0.34 1.2E-05 48.9 6.7 93 39-134 216-308 (379)
448 2l2t_A Receptor tyrosine-prote 90.2 0.34 1.2E-05 31.8 3.7 12 210-221 12-23 (44)
449 2jwa_A Receptor tyrosine-prote 89.7 0.5 1.7E-05 31.0 4.2 7 229-235 33-39 (44)
450 3g15_A CK, chetk-alpha, cholin 89.5 0.089 3E-06 54.0 1.0 29 438-466 246-280 (401)
451 4ann_A ESSB; membrane protein, 85.8 4.1 0.00014 37.2 9.6 119 363-521 42-160 (215)
452 3cxl_A N-chimerin; SH2, RHO-GA 84.3 0.14 4.9E-06 53.5 -1.1 60 314-376 147-214 (463)
453 4ano_A ESSB; membrane protein, 80.1 4.9 0.00017 36.9 7.7 117 364-521 48-165 (219)
454 2k1k_A Ephrin type-A receptor 76.1 2.6 8.9E-05 26.7 3.2 6 210-215 12-17 (38)
455 1iij_A ERBB-2 receptor protein 61.5 3.6 0.00012 25.4 1.5 7 210-216 10-16 (35)
456 1cja_A Protein (actin-fragmin 50.4 1.4E+02 0.0048 29.1 11.4 138 315-466 75-237 (342)
457 2jwa_A Receptor tyrosine-prote 35.7 21 0.00071 23.3 2.0 12 228-239 29-40 (44)
458 3ls8_A Phosphatidylinositol 3- 34.6 3.6E+02 0.012 28.6 12.5 71 386-465 416-501 (614)
459 2lz0_A Uncharacterized protein 27.5 1.2E+02 0.0041 23.5 5.8 48 50-98 6-53 (100)
460 2knc_A Integrin alpha-IIB; tra 26.8 1.3E+02 0.0043 20.6 4.8 16 206-221 11-26 (54)
461 2l8s_A Integrin alpha-1; trans 23.6 1.2E+02 0.004 20.7 4.2 15 206-220 8-22 (54)
462 2l9u_A Receptor tyrosine-prote 22.7 88 0.003 18.9 3.0 8 227-234 27-34 (40)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.5e-56 Score=448.39 Aligned_cols=262 Identities=23% Similarity=0.396 Sum_probs=215.4
Q ss_pred ccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
++|...+.||+|+||+||+|++. +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+ .+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVE--GDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEee--CCE
Confidence 46777889999999999999864 47889999998654 4556789999999999999999999999954 478
Q ss_pred EEEEEEeCCCCChHHHhhhhc---------CCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC
Q 007788 383 CFLIYDFAPKGKLSKYLDQEE---------GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ 453 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~ 453 (589)
.++|||||++|+|.++|+... .....++|..+++|+.|||.||+|||+.+ |+||||||+|||++++
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-----iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-----FVHRDLATRNCLVGEN 164 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECGG
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCccCHhhEEECCC
Confidence 999999999999999997642 22346999999999999999999999987 9999999999999999
Q ss_pred CceEEccccccccccCCceeee-ecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhH
Q 007788 454 FNPLIADCGLHKLLADDIVFSV-LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATF 531 (589)
Q Consensus 454 ~~~kl~DfGla~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 531 (589)
+.+||+|||+|+.......... ....+|++|||||++.++.|+.++|||||||+||||+| |+.||........
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~----- 239 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV----- 239 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----
T ss_pred CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 9999999999987654433222 23357889999999999999999999999999999999 8999976433211
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
...+........+..++..+.+++..||+.||++||||+||++.|+.+.+..
T Consensus 240 ~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 240 IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1122222233445667788999999999999999999999999999876543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-56 Score=451.13 Aligned_cols=264 Identities=22% Similarity=0.382 Sum_probs=211.0
Q ss_pred ccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
++|...+.||+|+||+||+|+++ +++.||||+++... ....++|.+|+++|++++|||||+++|+|.+ .+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTE--GRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCE
Confidence 45666788999999999999874 47899999998654 4556789999999999999999999999954 478
Q ss_pred EEEEEEeCCCCChHHHhhhhcC-----------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEG-----------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 451 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~ 451 (589)
.++|||||++|+|.++++.... ...+++|.++++|+.|||+||+|||+.+ ||||||||+||||+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-----iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-----FVHRDLATRNCLVG 192 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEEE
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-----eecccccHhhEEEC
Confidence 9999999999999999976432 1246999999999999999999999987 99999999999999
Q ss_pred CCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 007788 452 QQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 529 (589)
Q Consensus 452 ~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~ 529 (589)
+++.+||+|||+++....... .......+|+.|||||++.+..|+.++|||||||+||||+| |+.||........
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~--- 269 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA--- 269 (329)
T ss_dssp TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---
T ss_pred CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---
Confidence 999999999999987654332 22334568899999999999999999999999999999999 8999976433211
Q ss_pred hHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccccc
Q 007788 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMAT 585 (589)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~~ 585 (589)
...+....+...+..++..+.+++.+||+.||++||||+||+++|+.+.+....
T Consensus 270 --~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~ 323 (329)
T 4aoj_A 270 --IDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV 323 (329)
T ss_dssp --HHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC-
T ss_pred --HHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCcc
Confidence 112222233345566778899999999999999999999999999998776543
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-56 Score=448.49 Aligned_cols=258 Identities=23% Similarity=0.388 Sum_probs=213.4
Q ss_pred cCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
+++..+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+ .+..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~ 104 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--DQPL 104 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSSC
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE--CCEE
Confidence 3455678999999999999973 4689999999876555566789999999999999999999999954 4678
Q ss_pred EEEEEeCCCCChHHHhhhhcCC------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGS------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID 451 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~ 451 (589)
++|||||++|+|.++|...... ...++|..+++|+.|||+||+|||+.+ ||||||||+||||+
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-----iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVY 179 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEC
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCCCccccceEEC
Confidence 9999999999999999754311 235999999999999999999999988 99999999999999
Q ss_pred CCCceEEccccccccccCCcee-eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhh
Q 007788 452 QQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESA 529 (589)
Q Consensus 452 ~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~ 529 (589)
+++.+||+|||+++........ ......+|++|||||++.++.|+.++|||||||+||||+| |+.||.+.....
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~---- 255 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD---- 255 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH----
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH----
Confidence 9999999999999876543322 2234568899999999999999999999999999999999 889997643321
Q ss_pred hHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+...+......+.+..++..+.+++..||+.||++||||+||+++|+..
T Consensus 256 -~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 -VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1222223333445667788899999999999999999999999999864
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-56 Score=444.57 Aligned_cols=261 Identities=19% Similarity=0.364 Sum_probs=206.1
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.+++...+.||+|+||+||+|++++ .||||+++.... ....+.|.+|++++++++|||||+++|+|.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---CeEEEE
Confidence 4566778899999999999999763 599999975442 3445789999999999999999999999843 468999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
||||++|+|.++|+.... .++|..+++|+.|||.||+|||+.+ ||||||||+||||++++.+||+|||+|+.
T Consensus 110 mEy~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~~~-----IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAKN-----IIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EECCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred EEcCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 999999999999986543 4999999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCc-eeeeecCCccccccCcccccC---CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHH-hhccccCC
Q 007788 467 LADDI-VFSVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN-FIDRNLKG 541 (589)
Q Consensus 467 ~~~~~-~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 541 (589)
..... ........||+.|||||++.+ +.|+.++|||||||+||||+||+.||............... ...+. ..
T Consensus 182 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~ 260 (307)
T 3omv_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LS 260 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-ST
T ss_pred cccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cc
Confidence 65422 222334568999999999864 46899999999999999999999999754321111111111 11111 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..+..++..+.+++.+||+.||++||||.||+++|+.+...
T Consensus 261 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 23455677899999999999999999999999999887644
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-54 Score=444.62 Aligned_cols=275 Identities=22% Similarity=0.375 Sum_probs=227.0
Q ss_pred ccCHHHHHHhhccCccccccccCCCccEEEEEecC------CcEEEEEEeccCCCchHHHHHHHHHHHHhccCC-CCccc
Q 007788 298 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH-ENIIR 370 (589)
Q Consensus 298 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H-~niv~ 370 (589)
..+..+|+...++|+..+.||+|+||+||+|.+.. ++.||||++.........++|.+|+++|.+++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 44556778888999999999999999999998642 468999999877656667789999999999965 89999
Q ss_pred eeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcC------------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCe
Q 007788 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAI 438 (589)
Q Consensus 371 l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~i 438 (589)
++|+|... .+..++|||||++|+|.++|+.... ....++|..++.|+.|||+||+|||+.+ |
T Consensus 133 l~g~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-----i 206 (353)
T 4ase_A 133 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-----C 206 (353)
T ss_dssp EEEEECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-----C
T ss_pred EEEEEEec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-----e
Confidence 99998543 3568999999999999999976432 1245899999999999999999999988 9
Q ss_pred EecCCCCCCeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCC
Q 007788 439 VHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSL 516 (589)
Q Consensus 439 vH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~ 516 (589)
|||||||+|||+++++.+||+|||+|+.+..+.. .......+|+.|||||++.+..|+.++|||||||+||||+| |+.
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~ 286 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCC
Confidence 9999999999999999999999999997654332 23334557889999999999999999999999999999998 899
Q ss_pred CcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 517 VLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 517 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
||.+.... ..+...+....+...+..++.++.+++..||+.||++||||.|++++|+.+-+.
T Consensus 287 Pf~~~~~~----~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 287 PYPGVKID----EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SSTTCCCS----HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHH----HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 99754211 112233333344445566677899999999999999999999999999876543
No 6
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-52 Score=416.96 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=201.8
Q ss_pred ccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecC--CCCeEEEEE
Q 007788 312 SEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--GRGECFLIY 387 (589)
Q Consensus 312 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~~~lv~ 387 (589)
...+.||+|+||.||+|... ++..||||++..... ......|.+|++++++++|||||++++++.+. ..+..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 34467999999999999976 689999999975532 34456799999999999999999999988542 234689999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC-CCceEEcccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKL 466 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~-~~~~kl~DfGla~~ 466 (589)
|||++|+|.+++.... .+++..+..|+.||+.||+|||+++ ++|+||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~~---~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTRT---PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTSS---SCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---CCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999998654 4899999999999999999999875 56999999999999984 79999999999987
Q ss_pred ccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
...... ....||+.|||||++.+ +|+.++|||||||+||||+||+.||......... ...+.........+..
T Consensus 182 ~~~~~~---~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~---~~~i~~~~~~~~~~~~ 254 (290)
T 3fpq_A 182 KRASFA---KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI---YRRVTSGVKPASFDKV 254 (290)
T ss_dssp CCTTSB---EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH---HHHHTTTCCCGGGGGC
T ss_pred CCCCcc---CCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH---HHHHHcCCCCCCCCcc
Confidence 654432 23568999999998864 6999999999999999999999999653221111 1111111111111222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.+.++.+++.+||+.||++|||++|+++|-+.
T Consensus 255 ~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~ 286 (290)
T 3fpq_A 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence 34568899999999999999999999988664
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-52 Score=423.19 Aligned_cols=266 Identities=21% Similarity=0.294 Sum_probs=202.3
Q ss_pred cCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC--CeEEEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR--GECFLIY 387 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~--~~~~lv~ 387 (589)
+|...+.||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||+++|+|.+.+. ...++||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 466678999999999999998 58999999997542 222233456666778999999999999976432 3679999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC---CCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV---NKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~---~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
|||++|+|.++|+.. .++|..+++|+.|+|+||+|||+... ..++|+||||||+||||++++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999754 38999999999999999999998621 1346999999999999999999999999999
Q ss_pred ccccCCcee---eeecCCccccccCcccccCC------CCCCcchhhhHHHHHHHHHhCCCCcchhHHH----------H
Q 007788 465 KLLADDIVF---SVLKTSAAMGYLAPEYVTTG------RFTERSDIFAFGVIILQILTGSLVLTSSMRL----------A 525 (589)
Q Consensus 465 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~----------~ 525 (589)
+........ ......||+.|||||++.+. .++.++|||||||+||||+||+.|+...... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876543221 12234689999999998764 3678999999999999999998776422110 0
Q ss_pred -HhhhhHHHhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 526 -AESATFENFIDRNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 526 -~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
........+....+++..+ .+....+.+++.+||+.||++||||.||++.|+.+.+..
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 0001112222333333332 346678999999999999999999999999999887643
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.8e-53 Score=429.01 Aligned_cols=256 Identities=18% Similarity=0.362 Sum_probs=207.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ......|.+|++++++++|||||++++++.+ .+..|+|
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~--~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE--NGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEEEE
Confidence 57899999999999999999975 799999999976543 3445789999999999999999999999854 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++|+|.+++..... ..+++...+.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 102 mEy~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~-----IiHRDlKp~NILl~~~g~vKl~DFGla~~ 174 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDRK-----ILHRDIKSQNIFLTKDGTVQLGDFGIARV 174 (350)
T ss_dssp EECCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHTT-----CEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred EeCCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCCHHHEEECCCCCEEEccccccee
Confidence 999999999999976542 34789999999999999999999998 99999999999999999999999999997
Q ss_pred ccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
...... ......||+.|||||++.+..|+.++|||||||+||||+||+.||.+...... +..+..... ...+..
T Consensus 175 ~~~~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~~-~~~~~~ 248 (350)
T 4b9d_A 175 LNSTVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL----VLKIISGSF-PPVSLH 248 (350)
T ss_dssp CCHHHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTCC-CCCCTT
T ss_pred ecCCcc-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCC-CCCCcc
Confidence 754321 11234589999999999999999999999999999999999999976543222 122222221 123344
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.+..+.+++.+||+.||++|||++|++++-+..
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~ 281 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCHHhh
Confidence 567799999999999999999999999876543
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.9e-53 Score=427.22 Aligned_cols=255 Identities=16% Similarity=0.309 Sum_probs=211.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
+.|+..+.||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+++|++++|||||++++++.+ .+..||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEE
Confidence 56888899999999999999976 799999999976542 234568899999999999999999999954 47899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++|+|.+++... .+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+.+
T Consensus 151 Ey~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~-----IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 220 (346)
T 4fih_A 151 EFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQG-----VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220 (346)
T ss_dssp CCCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCCHHHEEECCCCCEEEecCcCceec
Confidence 999999999999753 3899999999999999999999998 999999999999999999999999999877
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc-cCCCCCHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN-LKGKFSES 546 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 546 (589)
..... ......||+.|||||++.+..|+.++|||||||++|||++|+.||.+....... ..+.+.. ........
T Consensus 221 ~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~----~~i~~~~~~~~~~~~~ 295 (346)
T 4fih_A 221 SKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM----KMIRDNLPPRLKNLHK 295 (346)
T ss_dssp CSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSSCCCCSCGGG
T ss_pred CCCCC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH----HHHHcCCCCCCCcccc
Confidence 54322 223456899999999999999999999999999999999999999765432221 1111111 11122334
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+..+.+++.+||+.||++|||++|++++-+....
T Consensus 296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 296 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 56788999999999999999999999998776543
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-52 Score=422.82 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=205.7
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
+.|...+.||+|+||.||+|+.+ +|+.||||+++.... +.+|+.++++++|||||++++++.+ .+..||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~--~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVRE--GPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEE
Confidence 45777889999999999999975 699999999976532 2469999999999999999999854 47899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC-ceEEcccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGLHKL 466 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfGla~~ 466 (589)
||+++|+|.+++.... .+++..+..|+.||+.||+|||+.+ ||||||||+|||++.++ .+||+|||+|+.
T Consensus 130 Ey~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~~-----IiHRDlKp~NILl~~~g~~vKl~DFGla~~ 200 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTRR-----ILHGDVKADNVLLSSDGSRAALCDFGHALC 200 (336)
T ss_dssp CCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTT-----EECSCCCGGGEEECTTSCCEEECCCTTCEE
T ss_pred eccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecccCHHHEEEeCCCCEEEEeeCCCCeE
Confidence 9999999999998654 3999999999999999999999998 99999999999999987 699999999987
Q ss_pred ccCCceee----eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc-CC
Q 007788 467 LADDIVFS----VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL-KG 541 (589)
Q Consensus 467 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 541 (589)
+..+.... .....||+.|||||++.+..|+.++|||||||++|||+||+.||........ ...+..... ..
T Consensus 201 ~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~----~~~i~~~~~~~~ 276 (336)
T 4g3f_A 201 LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL----CLKIASEPPPIR 276 (336)
T ss_dssp C------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC----HHHHHHSCCGGG
T ss_pred ccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHHcCCCCch
Confidence 75432211 1224589999999999999999999999999999999999999976432211 111111111 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..++..+..+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 23445567889999999999999999999999998876543
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=427.11 Aligned_cols=257 Identities=15% Similarity=0.306 Sum_probs=212.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.+.|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+ .+..|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEE--CCEEEEE
Confidence 356889999999999999999976 699999999976542 334568899999999999999999999955 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
||||++|+|.+++... .+++..+..|+.||+.||+|||+.+ ||||||||+||||+.++.+||+|||+|+.
T Consensus 227 mEy~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~~-----IiHRDiKp~NILl~~~g~vKl~DFGla~~ 296 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQG-----VIHRDIKSDSILLTHDGRVKLSDFGFCAQ 296 (423)
T ss_dssp EECCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSTTTEEECTTCCEEECCCTTCEE
T ss_pred EeCCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecccCCHHHEEEcCCCCEEEecCccceE
Confidence 9999999999999653 3899999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
+..... ......||+.|||||++.+..|+.++|||||||++|||++|+.||.+.......... .....+. ......
T Consensus 297 ~~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-~~~~~~~--~~~~~~ 372 (423)
T 4fie_A 297 VSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPR--LKNLHK 372 (423)
T ss_dssp CCSSCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCC--CSCTTS
T ss_pred CCCCCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-HcCCCCC--Cccccc
Confidence 754322 223456899999999999999999999999999999999999999765432221111 1111111 122234
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+..+.+++.+||+.||++|||+.|+++|-+....
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 56678999999999999999999999998765443
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.2e-51 Score=403.37 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=195.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||+||+|... +|+.||||++..... ......+.+|++++++++|||||++++++. +.+..++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--~~~~~~i 90 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK--SKDEIIM 90 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--ECCEEEE
Confidence 57899999999999999999975 799999999976532 233467999999999999999999999984 4578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+ +|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+
T Consensus 91 vmEy~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~~-----IiHRDiKP~NILl~~~~~vkl~DFGla~ 160 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp EEECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCTTTEEECTTCCEEECCSSCC-
T ss_pred EEeCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCChHHeEECCCCCEEEeecCCCe
Confidence 99999 689999997653 4999999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... .....||+.|||||++.+..+ +.++||||+||++|||+||+.||.+...... +..+..... ..+
T Consensus 161 ~~~~~~~--~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~----~~~i~~~~~--~~p 232 (275)
T 3hyh_A 161 IMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL----FKNISNGVY--TLP 232 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCC--CCC
T ss_pred ecCCCCc--cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCC--CCC
Confidence 7654322 223568999999999998876 5799999999999999999999976433211 112222111 233
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+..+.+++.+|++.||++|||++|++++-|.-
T Consensus 233 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k 267 (275)
T 3hyh_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHH
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccc
Confidence 44566789999999999999999999999998763
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.3e-52 Score=413.98 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=207.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ......+.+|++++++++|||||++++++. +.+..|+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~yi 109 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--DDEKLYF 109 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--eCCEEEE
Confidence 46899999999999999999975 799999999975421 233467899999999999999999999984 4578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++.....++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+
T Consensus 110 vmEy~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~~-----IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGKG-----IIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 999999999999998654 3999999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCc-eeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
.+.... ........||+.|||||++.+..|+.++||||+||++|||+||+.||.+...... +..+..... .++
T Consensus 181 ~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~--~~p 254 (311)
T 4aw0_A 181 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI----FAKIIKLEY--DFP 254 (311)
T ss_dssp ECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCC--CCC
T ss_pred ecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCC--CCC
Confidence 775432 1223345699999999999999999999999999999999999999976543222 222222221 233
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIE 574 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~ 574 (589)
...+.++.+++.+|++.||++|||++|++.
T Consensus 255 ~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 255 EKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp TTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred cccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 445667899999999999999999998643
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.6e-50 Score=403.89 Aligned_cols=257 Identities=19% Similarity=0.315 Sum_probs=195.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC-------
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR------- 380 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------- 380 (589)
++|+..+.||+|+||+||+|+.+ +|+.||||+++........+.+.+|++++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999975 7999999999876655556789999999999999999999998865432
Q ss_pred ---CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 381 ---GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 381 ---~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
...|+||||+++|+|.+++..... ....++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~~-----IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSKG-----LMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTCCEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHCc-----CccccCcHHHeEECCCCcEE
Confidence 246899999999999999986542 234677888999999999999999998 99999999999999999999
Q ss_pred EccccccccccCCcee-----------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH
Q 007788 458 IADCGLHKLLADDIVF-----------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA 526 (589)
Q Consensus 458 l~DfGla~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~ 526 (589)
|+|||+|+.+...... ......||+.|||||++.+..|+.++|||||||++|||++ ||........
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~ 235 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR 235 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH
Confidence 9999999877543211 1123458999999999999999999999999999999996 7754432211
Q ss_pred hhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 527 ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.+..+..... +...........+++.+||+.||++|||+.|++++-+.
T Consensus 236 ---~~~~~~~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~ 283 (299)
T 4g31_A 236 ---TLTDVRNLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF 283 (299)
T ss_dssp ---HHHHHHTTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred ---HHHHHhcCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence 1111111111 11112334456789999999999999999999987543
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.1e-51 Score=410.18 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=200.9
Q ss_pred ccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||+||+|+.. .++.||||+++.... ......+.+|++++++++|||||++++++.+ .+..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT--EGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE--TTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEE
Confidence 46889999999999999999863 478999999975432 2223468899999999999999999999854 4789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
|+||||+++|+|.+++.... .+++.....++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~~-----IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSLG-----IIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred EEEEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CcCCCCCHHHeEEcCCCCEEeccccc
Confidence 99999999999999998764 3999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
|+....... ......||+.|||||++.+..|+.++||||+||++|||+||+.||.+...... +..+.... ...
T Consensus 173 a~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~--~~~ 245 (304)
T 3ubd_A 173 SKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET----MTMILKAK--LGM 245 (304)
T ss_dssp EEC-----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCC--CCC
T ss_pred ceeccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH----HHHHHcCC--CCC
Confidence 986543221 22345689999999999999999999999999999999999999976543222 12222222 123
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPT-----MEAVIEELTV 578 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs-----~~evl~~L~~ 578 (589)
+...+.++.+++.+||+.||++||| ++|+++|-+.
T Consensus 246 p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f 285 (304)
T 3ubd_A 246 PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285 (304)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence 4445677899999999999999998 5788877554
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.4e-47 Score=393.59 Aligned_cols=261 Identities=17% Similarity=0.293 Sum_probs=204.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecC----CCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR----GRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~~~~ 382 (589)
++|+..+.||+|+||+||+|... +|+.||||+++.... ......+.+|+++|++++|||||++++++... +.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57889999999999999999975 799999999976543 33446788999999999999999999987432 3367
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~~-----iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSAQ-----VIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCc-----CcCCCcCccccccCCCCCEEEeecc
Confidence 899999995 78999997543 4999999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCce---eeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc-
Q 007788 463 LHKLLADDIV---FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR- 537 (589)
Q Consensus 463 la~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~- 537 (589)
+|+.+..... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+................+
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~ 283 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPS 283 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9987643321 122345689999999998875 46999999999999999999999997643322111111100000
Q ss_pred -----------------ccC--CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 538 -----------------NLK--GKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 538 -----------------~~~--~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.+. ...+ +.....+.+++.+|++.||++|||++|+++|-+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~ 349 (398)
T 4b99_A 284 PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 349 (398)
T ss_dssp GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence 000 0001 11245688999999999999999999999987654
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.8e-47 Score=385.77 Aligned_cols=281 Identities=33% Similarity=0.667 Sum_probs=234.0
Q ss_pred ccCHHHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeec
Q 007788 298 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS 377 (589)
Q Consensus 298 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 377 (589)
.+++.++..+.++|...+.||+|+||.||+|..++|+.||||++...........|.+|++++++++||||+++++++..
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 57889999999999999999999999999999888999999999865543334478999999999999999999999943
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
.+..++||||+++|+|.+++.........++|..+..|+.|++.||+|||+.. .++|+||||||+|||++.++.+|
T Consensus 99 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 99 --PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC--DPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp --SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS--SSCEECCCCSGGGEEECTTCCEE
T ss_pred --CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEeCCCchhhEEECCCCCEE
Confidence 46789999999999999999877655567999999999999999999999981 12399999999999999999999
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH-----------
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA----------- 526 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~----------- 526 (589)
|+|||+++..............+|+.|+|||.+.+..++.++||||||+++|||+||+.||........
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 999999987754443344445689999999999988999999999999999999999999964321111
Q ss_pred --hhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 527 --ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 527 --~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.........+..............+.+++..||+.||++|||++|++++|+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 01122334444555566788899999999999999999999999999999875443
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-46 Score=380.63 Aligned_cols=280 Identities=33% Similarity=0.588 Sum_probs=230.6
Q ss_pred ccCHHHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeec
Q 007788 298 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS 377 (589)
Q Consensus 298 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 377 (589)
.+++.++..++++|+..+.||+|+||.||+|.+++++.||||++.... ......|.+|++++++++||||+++++++.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~- 105 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCD- 105 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECC-
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-
Confidence 445556677889999999999999999999999889999999987654 345678999999999999999999999984
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
..+..++||||+++|+|.+++.........++|..++.++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 106 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~k 179 (321)
T 2qkw_B 106 -ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-----IIHRDVKSINILLDENFVPK 179 (321)
T ss_dssp -CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCSTTEEECTTCCEE
T ss_pred -CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-----eecCCCCHHHEEECCCCCEE
Confidence 457789999999999999999766544456999999999999999999999988 99999999999999999999
Q ss_pred EccccccccccCCc-eeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH-----------
Q 007788 458 IADCGLHKLLADDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA----------- 525 (589)
Q Consensus 458 l~DfGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~----------- 525 (589)
|+|||+++...... ........++..|+|||.+.+..++.++||||||+++|||+||+.||.......
T Consensus 180 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~ 259 (321)
T 2qkw_B 180 ITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259 (321)
T ss_dssp ECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHH
T ss_pred EeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhc
Confidence 99999997654321 111223346888999999998999999999999999999999999986432110
Q ss_pred HhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccccc
Q 007788 526 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMAT 585 (589)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~~ 585 (589)
.....+...+++.............+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~ 319 (321)
T 2qkw_B 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319 (321)
T ss_dssp HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence 011122333444455566788899999999999999999999999999999988765543
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6e-46 Score=382.19 Aligned_cols=258 Identities=19% Similarity=0.259 Sum_probs=198.6
Q ss_pred HHHhhccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecC
Q 007788 304 VESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR 378 (589)
Q Consensus 304 l~~~~~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 378 (589)
+....++|++.+.||+|+||+||+|+.+ .++.||||++.... ....+.+|++++.++ +|||||++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~- 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRK- 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-
Confidence 3445688999999999999999999853 47899999987543 234678999999998 69999999998854
Q ss_pred CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC-CceE
Q 007788 379 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPL 457 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~-~~~k 457 (589)
.+..++||||+++|+|.+++. .+++.....++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 92 -~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~g-----IiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 92 -NDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFG-----IVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp -TTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEETTTTEEE
T ss_pred -CCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCcCCHHHeEEeCCCCeEE
Confidence 578999999999999999984 2889999999999999999999998 9999999999999877 7999
Q ss_pred EccccccccccCCce---------------------------eeeecCCccccccCcccccCC-CCCCcchhhhHHHHHH
Q 007788 458 IADCGLHKLLADDIV---------------------------FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIIL 509 (589)
Q Consensus 458 l~DfGla~~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~ 509 (589)
|+|||+|+...+... .......||+.|+|||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 999999976543210 011234589999999999875 4899999999999999
Q ss_pred HHHhCCCCcchhHHHHHh-hh------------------------------hHHHhhc---------ccc---------C
Q 007788 510 QILTGSLVLTSSMRLAAE-SA------------------------------TFENFID---------RNL---------K 540 (589)
Q Consensus 510 elltg~~p~~~~~~~~~~-~~------------------------------~~~~~~~---------~~~---------~ 540 (589)
||+||+.||......... .. ....... +.. .
T Consensus 239 ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 318 (361)
T 4f9c_A 239 SLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATN 318 (361)
T ss_dssp HHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-------------------
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccc
Confidence 999999999543211000 00 0000000 000 0
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.......+.++.+++.+|++.||++|||++|+++|-+.
T Consensus 319 ~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f 356 (361)
T 4f9c_A 319 LEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356 (361)
T ss_dssp ---CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred ccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence 00011224567899999999999999999999988664
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.9e-45 Score=396.98 Aligned_cols=254 Identities=19% Similarity=0.233 Sum_probs=204.4
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHH---HHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEF---VKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+ ..++.+++.++|||||++++++. +.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~--~~~ 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH--TPD 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE--CSS
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE--ECC
Confidence 367999999999999999999976 699999999964321 1112223 34467778889999999999884 457
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..|+||||++||+|.++|.... .+++.....++.||+.||+|||+.+ ||||||||+||||+.+|.+||+||
T Consensus 266 ~lylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~g-----IiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNRF-----VVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCchHHeEEeCCCCEEeccc
Confidence 8999999999999999998764 3999999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
|+|+.+..... ....||+.|||||++.. ..|+.++||||+||+||||++|+.||.+...... ...........
T Consensus 337 GlA~~~~~~~~---~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i~~~~-- 410 (689)
T 3v5w_A 337 GLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMA-- 410 (689)
T ss_dssp TTCEECSSCCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHHHHCC--
T ss_pred ceeeecCCCCC---CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhhcCCC--
Confidence 99987765432 34569999999999975 5799999999999999999999999976432111 01111222211
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPT-----MEAVIEELTV 578 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs-----~~evl~~L~~ 578 (589)
...+...+..+.+++..|++.||++|++ ++|+++|-+.
T Consensus 411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF 453 (689)
T 3v5w_A 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453 (689)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence 2234455677899999999999999998 7899887654
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.4e-45 Score=400.11 Aligned_cols=253 Identities=19% Similarity=0.270 Sum_probs=210.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+++|++++|||||++++++. +.+..++||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFE--DDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--CSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE--ECCEEEEEE
Confidence 57899999999999999999976 79999999997654 344567889999999999999999999984 457899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC--CceEEccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ--FNPLIADCGLHK 465 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~--~~~kl~DfGla~ 465 (589)
|||++|+|.+++....+ .+++.....++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+|+
T Consensus 234 E~~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~~-----iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 234 EFMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHENN-----YVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp ECCCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred eecCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeccCChhhccccCCCCCCEEEeecccee
Confidence 99999999999965432 4899999999999999999999998 9999999999999854 899999999999
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc--CCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL--KGKF 543 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~ 543 (589)
.+...... ....||+.|||||++.+..|+.++||||+||++|||++|+.||.+...... +..+..... ....
T Consensus 306 ~~~~~~~~--~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~----~~~i~~~~~~~~~~~ 379 (573)
T 3uto_A 306 HLDPKQSV--KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET----LRNVKSCDWNMDDSA 379 (573)
T ss_dssp ECCTTSEE--EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTTCCCCCSGG
T ss_pred EccCCCce--eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHhCCCCCCccc
Confidence 87655432 234689999999999999999999999999999999999999976543221 111211111 1111
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
....+..+.+++.+||+.||++|||+.|+++|-+.
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~ 414 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence 12345678899999999999999999999998664
No 22
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.3e-44 Score=372.63 Aligned_cols=262 Identities=24% Similarity=0.404 Sum_probs=214.6
Q ss_pred hccCccccccccCCCccEEEEEec--------CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR 378 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 378 (589)
.++|...+.||+|+||.||+|... ++..||||+++..........+.+|+++++++ +||||++++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 467888899999999999999862 45689999998765555667899999999999 8999999999984
Q ss_pred CCCeEEEEEEeCCCCChHHHhhhhcC------------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCC
Q 007788 379 GRGECFLIYDFAPKGKLSKYLDQEEG------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~ 446 (589)
..+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~ 232 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-----CIHRDLAAR 232 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGG
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-----eeccccchh
Confidence 35678999999999999999986542 1235899999999999999999999988 999999999
Q ss_pred CeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHH
Q 007788 447 KVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRL 524 (589)
Q Consensus 447 Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~ 524 (589)
|||++.++.+||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~ 312 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 312 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred hEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999999999986643221 11223345678999999999999999999999999999999 99998653221
Q ss_pred HHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 525 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.....+........+..++..+.+++..||+.||++||++.|++++|+.+..
T Consensus 313 -----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 313 -----ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp -----GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1122222223334455567789999999999999999999999999998754
No 23
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=9.6e-45 Score=377.86 Aligned_cols=260 Identities=24% Similarity=0.430 Sum_probs=214.8
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..++|...+.||+|+||.||+|.+. +++.||||+++.........+|.+|++++++++||||++++++|.. .+..++
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l 189 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYI 189 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--SSSCEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--CCCcEE
Confidence 3457788899999999999999986 7899999999865544455679999999999999999999999943 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 190 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~-----ivHrDlkp~Nil~~~~~~~kl~DfG~s~ 261 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESKC-----CIHRDLAARNCLVTEKNVLKISDFGMSR 261 (377)
T ss_dssp EEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----cCCcccCHHHEEEcCCCcEEECcCCCce
Confidence 9999999999999986542 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeee-cCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 466 LLADDIVFSVL-KTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 466 ~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
........... ...+++.|+|||.+.++.++.++|||||||++|||+| |+.||...... ...+.+........
T Consensus 262 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 336 (377)
T 3cbl_A 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREFVEKGGRLPC 336 (377)
T ss_dssp ECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHHHHTTCCCCC
T ss_pred ecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCC
Confidence 75543322111 1224567999999998899999999999999999999 89998754322 11222333333344
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
+..++..+.+++..||+.||++|||++++++.|+.+..
T Consensus 337 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 45566789999999999999999999999999998764
No 24
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=366.23 Aligned_cols=261 Identities=22% Similarity=0.417 Sum_probs=213.2
Q ss_pred hccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|...+.||+|+||.||+|.+. .+..||||+++..........|.+|++++++++||||+++++++.. .+..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG--GGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCcc
Confidence 357888899999999999999974 4557999999876555666789999999999999999999999844 4678
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... .+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg~ 197 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDLG-----YVHRDLAARNVLVDSNLVCKVSDFGL 197 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCCSS
T ss_pred EEEeeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeCCCCCcceEEECCCCCEEECCCCc
Confidence 999999999999999975532 4999999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+.....
T Consensus 198 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-----~~~~~~~~~ 272 (325)
T 3kul_A 198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----ISSVEEGYR 272 (325)
T ss_dssp CEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-----HHHHHTTCC
T ss_pred ccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-----HHHHHcCCC
Confidence 987654321 12223345678999999998899999999999999999999 9999965432211 111222223
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
...+...+..+.+++..||+.||++|||+.|+++.|+.+....
T Consensus 273 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 3344556678999999999999999999999999999876543
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-44 Score=364.56 Aligned_cols=269 Identities=22% Similarity=0.388 Sum_probs=207.8
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
.++....++|+..+.||+|+||.||+|+. +|+.||||++..... .....+|.+|++++++++||||+++++++. ..
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~ 106 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVT--QP 106 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--ST
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--EC
Confidence 33444567888999999999999999987 588999999976543 334467999999999999999999999984 44
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---~~ivH~Dikp~NIll~~~~~~kL~D 182 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRN---PPIVHRNLKSPNLLVDKKYTVKVCD 182 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSS---SCCCCTTCCGGGEEECTTCCEEECC
T ss_pred CceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC---CCEECCCCChhhEEEeCCCcEEECC
Confidence 678999999999999999975421 123899999999999999999999875 5699999999999999999999999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
||+++....... ......+|+.|+|||.+.+..++.++||||||+++|||+||+.||........ ..........
T Consensus 183 fg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~----~~~~~~~~~~ 257 (309)
T 3p86_A 183 FGLSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV----VAAVGFKCKR 257 (309)
T ss_dssp CC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHHSCCC
T ss_pred CCCCcccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhcCCC
Confidence 999986543321 22344578899999999999999999999999999999999999975432211 1111111222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+...+..+.+++..||+.||++|||++++++.|+.+...
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 234455667899999999999999999999999999877654
No 26
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.6e-44 Score=373.77 Aligned_cols=260 Identities=23% Similarity=0.432 Sum_probs=203.6
Q ss_pred hccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|+..+.||+|+||.||+|+.. ++..||||+++.........+|.+|+.++++++||||+++++++.. .+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCce
Confidence 357888999999999999999875 5778999999876545566789999999999999999999999943 4678
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg~ 193 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDMG-----YVHRDLAARNILINSNLVCKVSDFGL 193 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTCCEEECCC--
T ss_pred EEEEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeCCCCCcceEEEcCCCCEEECcCcc
Confidence 99999999999999997653 24899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 194 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~~i~~~~~ 268 (373)
T 2qol_A 194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIKAVDEGYR 268 (373)
T ss_dssp --------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHHHHHTTEE
T ss_pred ccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCC
Confidence 987654321 11222334678999999999999999999999999999998 99999654321 11222223333
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+...+..+.+++..||+.||++||++.++++.|+.+...
T Consensus 269 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 333445667899999999999999999999999999987544
No 27
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.5e-44 Score=355.78 Aligned_cols=257 Identities=23% Similarity=0.461 Sum_probs=213.5
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 388 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~E 388 (589)
++|+..+.||+|+||.||+|...+++.||||++..... ..+++.+|++++++++||||+++++++.+ .+..++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 85 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVFE 85 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSEEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCceEEEEE
Confidence 56888899999999999999998899999999986542 34579999999999999999999999843 467899999
Q ss_pred eCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccccc
Q 007788 389 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 468 (589)
Q Consensus 389 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~ 468 (589)
|+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 157 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC-----VIHRDLAARNCLVGENQVIKVSDFGMTRFVL 157 (269)
T ss_dssp CCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred eCCCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhCC-----eecCCcchheEEEcCCCCEEecccccccccc
Confidence 9999999999976543 4899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHHH
Q 007788 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547 (589)
Q Consensus 469 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (589)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||........ ... +........+...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~----~~~-~~~~~~~~~~~~~ 232 (269)
T 4hcu_A 158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VED-ISTGFRLYKPRLA 232 (269)
T ss_dssp CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHH-HHTTCCCCCCTTS
T ss_pred ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH----HHH-HhcCccCCCCCcC
Confidence 443333334456678999999998999999999999999999999 8999865432211 111 1112222333445
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
+..+.+++..||+.||++||++.|++++|+.+.+.
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 67799999999999999999999999999988653
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=7.1e-44 Score=353.29 Aligned_cols=258 Identities=21% Similarity=0.405 Sum_probs=215.6
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
.++|+..+.||+|+||.||+|..+++..||||++..... ...++.+|++++.+++||||+++++++. ..+..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCS--KEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEc--cCCceEEEE
Confidence 467888899999999999999999888999999976542 3457999999999999999999999984 457789999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 83 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 154 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLESHQ-----FIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154 (268)
T ss_dssp ECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----EEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred EccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCcCcceEEECCCCCEEEccCccceec
Confidence 99999999999987542 3899999999999999999999988 999999999999999999999999999877
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
............++..|+|||.+.+..++.++||||||+++|||+| |+.||......... .. +........+..
T Consensus 155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~----~~-~~~~~~~~~~~~ 229 (268)
T 3sxs_A 155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV----LK-VSQGHRLYRPHL 229 (268)
T ss_dssp CTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH----HH-HHTTCCCCCCTT
T ss_pred chhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH----HH-HHcCCCCCCCCc
Confidence 6655444555566778999999998899999999999999999999 99998654322111 11 111112222333
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.+..+.+++..||+.||++|||+.|++++|+.+.+.
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 456799999999999999999999999999998764
No 29
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3e-44 Score=361.31 Aligned_cols=266 Identities=24% Similarity=0.412 Sum_probs=212.4
Q ss_pred ccCccccccccCCCccEEEEEe-----cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|++ .+++.||||++.... ....+.|.+|++++++++||||+++++++...+....
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 5788889999999999999984 268999999997654 4455789999999999999999999999865545568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTKR-----YIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred EEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcCC-----cccCCCCHhhEEEcCCCeEEEccCcc
Confidence 999999999999999976542 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh-----------hhh
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE-----------SAT 530 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~-----------~~~ 530 (589)
++....... .......++..|+|||.+.+..++.++||||||+++|||+||..|+......... ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654321 1122334566799999999999999999999999999999999988654321100 001
Q ss_pred HHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 531 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
....+........+...+..+.+++..||+.||++|||++|+++.|+.+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 22222233333445566778999999999999999999999999999987654
No 30
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=367.89 Aligned_cols=256 Identities=18% Similarity=0.338 Sum_probs=203.1
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++. ..+..++|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE--TANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEE--eCCEEEEE
Confidence 467888999999999999999964 799999999977654444567899999999999999999999984 45789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++..
T Consensus 87 ~E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQG-----YAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 99999999999997654 3899999999999999999999988 99999999999999999999999999887
Q ss_pred ccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
.............+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||......... ..+..... ..+.
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~----~~i~~~~~--~~p~ 231 (347)
T 3zgw_A 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALY----KKIMRGKY--DVPK 231 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCC--CCCT
T ss_pred ccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHcCCC--CCCC
Confidence 65443333344568899999999988775 89999999999999999999999765332221 12222111 2233
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
..+..+.+++.+||+.||++|||++|++++-+...
T Consensus 232 ~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 232 WLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred CCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 34567889999999999999999999999877543
No 31
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=362.00 Aligned_cols=260 Identities=23% Similarity=0.429 Sum_probs=211.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.|.+|++++++++||||+++++++.+ .+..++||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~ 86 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYK--DKRLNFIT 86 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEec--CCeeEEEE
Confidence 56788899999999999999975 68999999986543 4556789999999999999999999999965 47899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++|+|.+++..... .++|..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 87 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 158 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSMN-----IIHRDLNSHNCLVRENKNVVVADFGLARLM 158 (310)
T ss_dssp ECCTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCCcCeEEECCCCCEEEeecccceec
Confidence 99999999999986432 4999999999999999999999988 999999999999999999999999999876
Q ss_pred cCCceee-------------eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh-hhhHHH
Q 007788 468 ADDIVFS-------------VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE-SATFEN 533 (589)
Q Consensus 468 ~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~ 533 (589)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++|..|+......... ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 238 (310)
T 3s95_A 159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG 238 (310)
T ss_dssp C--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH
T ss_pred ccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc
Confidence 5432211 11345788999999999999999999999999999999999988653221110 111122
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..+... +...+..+.+++.+||+.||++|||+.++++.|+.+.+..
T Consensus 239 ~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 239 FLDRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cccccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 222221 2233456889999999999999999999999999887654
No 32
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-44 Score=373.33 Aligned_cols=277 Identities=22% Similarity=0.382 Sum_probs=223.7
Q ss_pred cccCHHHHHHhhccCccccccccCCCccEEEEEe------cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCcc
Q 007788 297 FRLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENII 369 (589)
Q Consensus 297 ~~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv 369 (589)
..+...+++...++|...+.||+|+||.||+|.+ .+++.||||++.........+.|.+|++++.++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 3456677888889999999999999999999984 246899999998765555667899999999999 799999
Q ss_pred ceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCC--------------------------------------------
Q 007788 370 RLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS-------------------------------------------- 405 (589)
Q Consensus 370 ~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~-------------------------------------------- 405 (589)
+++++|... ....++||||+++|+|.+++......
T Consensus 90 ~~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 90 NLLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CEEEEECST-TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeecC-CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 999998543 34589999999999999999865321
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 406 ------------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 406 ------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-----ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-----CIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 122889999999999999999999988 999999999999999999999999999866
Q ss_pred cCCc-eeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 468 ADDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 468 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
.... ........+|..|+|||++.+..++.++||||||+++|||+| |+.||....... .....+........+.
T Consensus 244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~ 319 (359)
T 3vhe_A 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRMRAPD 319 (359)
T ss_dssp TSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHHHHHTCCCCCCT
T ss_pred cccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHHHHcCCCCCCCC
Confidence 4332 222334456788999999999999999999999999999999 999996543211 1112222222233344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.....+.+++..||+.||++|||+.|++++|+.+.+..
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 45667999999999999999999999999999876543
No 33
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6e-44 Score=363.81 Aligned_cols=262 Identities=22% Similarity=0.365 Sum_probs=206.9
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCC--CCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG--RGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~~~l 385 (589)
.++|+..+.||+|+||.||+|+.. ++.||||++.... .....+..|+.++.+++||||+++++++.... ....++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 467888999999999999999986 7999999997542 33445677999999999999999999986543 235799
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC----------CCCCCCeEecCCCCCCeeecCCCc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS----------EVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----------~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
||||+++|+|.+++... .++|..++.++.|++.||+|||+. + |+||||||+|||++.++.
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-----ivH~Dlkp~Nill~~~~~ 169 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-----ISHRDIKSKNVLLKNNLT 169 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-----EECSCCSGGGEEECTTCC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-----EEeCCCChHhEEECCCCe
Confidence 99999999999999754 389999999999999999999987 6 999999999999999999
Q ss_pred eEEccccccccccCCcee-eeecCCccccccCcccccCC-----CCCCcchhhhHHHHHHHHHhCCCCcchhHHHH----
Q 007788 456 PLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTG-----RFTERSDIFAFGVIILQILTGSLVLTSSMRLA---- 525 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~---- 525 (589)
+||+|||+++........ ......+|+.|+|||++.+. .++.++|||||||++|||+||+.||.+.....
T Consensus 170 ~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~ 249 (322)
T 3soc_A 170 ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249 (322)
T ss_dssp EEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTT
T ss_pred EEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccch
Confidence 999999999876543221 12234578899999999863 45678899999999999999999986432100
Q ss_pred -H------hhhhHHH-hhccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 526 -A------ESATFEN-FIDRNLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 526 -~------~~~~~~~-~~~~~~~~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
. ....... .......... .......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0001111 1111112111 234567799999999999999999999999999988753
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-43 Score=357.74 Aligned_cols=255 Identities=16% Similarity=0.309 Sum_probs=210.2
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.. .+..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE--CCEEEEE
Confidence 46788999999999999999996 478999999997654 2335678999999999999999999999854 4689999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 96 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ-----VIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (297)
T ss_dssp EECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhCC-----ceeCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999999999999764 3899999999999999999999988 99999999999999999999999999887
Q ss_pred ccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
...... ......+|+.|+|||.+.+..++.++|||||||++|||+||+.||............. .........+..
T Consensus 166 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~ 241 (297)
T 3fxz_A 166 ITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEK 241 (297)
T ss_dssp CCSTTC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHCSCCCSCGGG
T ss_pred cCCccc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCCCCCCCCccc
Confidence 654332 2233468889999999999999999999999999999999999997543321111111 111111223345
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.+..+.+++.+||+.||++|||++|++++-+..
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~ 274 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhChhhc
Confidence 567789999999999999999999999886654
No 35
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-43 Score=356.61 Aligned_cols=266 Identities=21% Similarity=0.286 Sum_probs=215.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|... +++.||||++.........+.+.+|++++++++||||+++++++........++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57888899999999999999986 58999999998655444567788999999999999999999998766566889999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee----cCCCceEEccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI----DQQFNPLIADCGL 463 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfGl 463 (589)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG-----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 99999999999986543 234899999999999999999999988 9999999999999 8888899999999
Q ss_pred cccccCCceeeeecCCccccccCccccc--------CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVT--------TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 535 (589)
++....... .....+|..|+|||++. +..++.++|||||||++|||+||+.||............+..++
T Consensus 163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred ceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 987654432 22345788999999886 56789999999999999999999999964321111111111111
Q ss_pred ccc-----------------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 536 DRN-----------------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 536 ~~~-----------------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
... ............+.+++..|++.||++|||++|++++..+.+-.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 110 11134577888999999999999999999999999999876543
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-43 Score=359.69 Aligned_cols=268 Identities=16% Similarity=0.301 Sum_probs=217.4
Q ss_pred ccCHHHHHHhhcc----------CccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCC
Q 007788 298 RLNLEEVESATQC----------FSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE 366 (589)
Q Consensus 298 ~~~~~~l~~~~~~----------f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~ 366 (589)
.++.+++..+++. |+..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCCT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCC
Confidence 5677888877764 677789999999999999986 79999999997654 34456789999999999999
Q ss_pred CccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCC
Q 007788 367 NIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446 (589)
Q Consensus 367 niv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~ 446 (589)
||+++++++.. .+..++||||+++|+|.+++... .++|..+..++.|++.||+|||+.+ |+||||||+
T Consensus 103 niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~ 170 (321)
T 2c30_A 103 NVVEMYKSYLV--GEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQG-----VIHRDIKSD 170 (321)
T ss_dssp TBCCEEEEEEE--TTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGG
T ss_pred CcceEEEEEEE--CCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHH
Confidence 99999999865 46899999999999999998643 3899999999999999999999988 999999999
Q ss_pred CeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH
Q 007788 447 KVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA 526 (589)
Q Consensus 447 Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~ 526 (589)
||+++.++.+||+|||++........ ......+|+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 171 NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 171 SILLTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp GEEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred HEEECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999887654322 12344688899999999999999999999999999999999999975433211
Q ss_pred hhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 527 ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
. ..+.....+.. ......+..+.+++.+||+.||++|||+.|++++.+.....
T Consensus 250 ~-~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 250 M-KRLRDSPPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp H-HHHHHSSCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred H-HHHhcCCCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 1 11111111111 11223456789999999999999999999999987765443
No 37
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.6e-44 Score=383.80 Aligned_cols=261 Identities=23% Similarity=0.431 Sum_probs=216.0
Q ss_pred HHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 304 VESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 304 l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++...++|...+.||+|+||.||+|.++++..||||+++... ...+.|.+|++++++++|||||++++++. .+..
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~---~~~~ 257 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT---KEPI 257 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSC
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe---CCcc
Confidence 344556788889999999999999999889999999998653 34568999999999999999999999984 3568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~-----ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQRN-----YIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 999999999999999985432 13889999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
++..............+++.|+|||.+....++.++|||||||++|||+| |+.||........ ...+.......
T Consensus 331 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~-----~~~i~~~~~~~ 405 (454)
T 1qcf_A 331 ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-----IRALERGYRMP 405 (454)
T ss_dssp GGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-----HHHHHHTCCCC
T ss_pred ceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCCCCC
Confidence 98765433222233445678999999998999999999999999999999 9999975432211 11222223333
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+..++..+.+++..||+.||++|||++++++.|+.+..
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 455567789999999999999999999999999998754
No 38
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-43 Score=354.05 Aligned_cols=257 Identities=24% Similarity=0.426 Sum_probs=210.7
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
.++|+..+.||+|+||.||+|...++..||||++..... ..+++.+|++++.+++||||+++++++. +.+..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEe--cCCCeEEEE
Confidence 457888899999999999999999899999999986542 3467999999999999999999999984 457789999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 99 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 170 (283)
T 3gen_A 99 EYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQ-----FLHRDLAARNCLVNDQGVVKVSDFGLSRYV 170 (283)
T ss_dssp CCCTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred eccCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCCCccceEEEcCCCCEEEccccccccc
Confidence 99999999999976432 3899999999999999999999988 999999999999999999999999999876
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
............+++.|+|||.+.+..++.++||||||+++|||+| |+.||........ ...+........+..
T Consensus 171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~ 245 (283)
T 3gen_A 171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-----AEHIAQGLRLYRPHL 245 (283)
T ss_dssp CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-----HHHHHTTCCCCCCTT
T ss_pred cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH-----HHHHhcccCCCCCCc
Confidence 5443323334456678999999998899999999999999999998 9999975433211 111112222233344
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+..+.+++..||+.||++|||++|++++|+.+..
T Consensus 246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 246 ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 45679999999999999999999999999998754
No 39
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-42 Score=349.60 Aligned_cols=274 Identities=28% Similarity=0.530 Sum_probs=224.4
Q ss_pred cccCHHHHHHhhccCccc------cccccCCCccEEEEEecCCcEEEEEEeccCC---CchHHHHHHHHHHHHhccCCCC
Q 007788 297 FRLNLEEVESATQCFSEV------NLLGKGNFSSVYKGTLRDGTLVAIRSINVTS---CKSEEAEFVKGLYLLTSLRHEN 367 (589)
Q Consensus 297 ~~~~~~~l~~~~~~f~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~---~~~~~~~~~~e~~~l~~l~H~n 367 (589)
..|+++++..++++|... +.||+|+||.||+|.. +++.||||++.... .....+.|.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 368889999999999887 8899999999999997 58899999987542 2344578999999999999999
Q ss_pred ccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCC
Q 007788 368 IIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 447 (589)
Q Consensus 368 iv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~N 447 (589)
|+++++++.. .+..++||||+++|+|.+++..... ...++|..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 92 i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dlkp~N 163 (307)
T 2nru_A 92 LVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHENH-----HIHRDIKSAN 163 (307)
T ss_dssp BCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGG
T ss_pred eEEEEEEEec--CCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcCC-----eecCCCCHHH
Confidence 9999999844 4678999999999999999975432 245999999999999999999999988 9999999999
Q ss_pred eeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH-
Q 007788 448 VLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA- 525 (589)
Q Consensus 448 ill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~- 525 (589)
|++++++.+||+|||+++....... .......++..|+|||.+.+ .++.++||||||+++|||++|+.||.......
T Consensus 164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 242 (307)
T 2nru_A 164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242 (307)
T ss_dssp EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence 9999999999999999886654221 12223457889999998765 58999999999999999999999997532110
Q ss_pred ---------HhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 526 ---------AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 526 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.....+.+.++... ...+......+.+++..||+.||++|||+++++++|+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 243 LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 01112333444333 24567788899999999999999999999999999998753
No 40
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9e-44 Score=363.31 Aligned_cols=258 Identities=24% Similarity=0.430 Sum_probs=205.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCc----EEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|.+. +++ .||+|.+..........+|.+|+.++++++||||++++++|.. +..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STV 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---SSE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---CCe
Confidence 56888899999999999999964 344 4688888765544556789999999999999999999999964 347
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++|+||+++|+|.+++..... .+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~-----ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEEEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred EEEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhCC-----eeCCCCChheEEECCCCCEEEccCcc
Confidence 899999999999999987543 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 464 HKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 464 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
++....... .......+|..|+|||.+.+..++.++|||||||++|||+| |+.||...... .....+......
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~~~~~~~~~ 238 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGERL 238 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCC
T ss_pred eeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----HHHHHHHcCCCC
Confidence 987654322 22233456778999999999999999999999999999999 99999654321 222333333333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..+......+.+++.+||+.||++||+++|++++|+.+...
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 44555677899999999999999999999999999987654
No 41
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.8e-43 Score=354.58 Aligned_cols=263 Identities=19% Similarity=0.344 Sum_probs=204.7
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... ..+|||+++.... ....+.|.+|++++++++||||+++++++.. +..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---CcEEEE
Confidence 357888899999999999999875 3589998876443 3345789999999999999999999998732 457899
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++.... ..+++..++.|+.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~DFg~a~~ 181 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAKN-----IIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp EECCSSCBHHHHHHTSC---CCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred EecCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----EeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence 99999999999997543 24999999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCc-eeeeecCCccccccCccccc---CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 467 LADDI-VFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 467 ~~~~~-~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
..... ........+|+.|+|||.+. +..++.++||||||+++|||+||+.||........................
T Consensus 182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (307)
T 3lb7_A 182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK 261 (307)
T ss_dssp ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT
T ss_pred cccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhh
Confidence 54311 11223446888999999986 567899999999999999999999999754322111111111101111112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
....++..+.+++..||+.||++||++.|++++|+.+....
T Consensus 262 ~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 22345678999999999999999999999999999887654
No 42
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=368.47 Aligned_cols=264 Identities=19% Similarity=0.366 Sum_probs=213.3
Q ss_pred hccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
.++|...+.||+|+||.||+|.+. +++.||||++...........+.+|+.++++++||||+++++++.. .+
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--SL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec--CC
Confidence 357888899999999999999953 4678999999766555666789999999999999999999999843 46
Q ss_pred eEEEEEEeCCCCChHHHhhhhcC---CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC---c
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEG---SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF---N 455 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~---~ 455 (589)
..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~~~~~~ 222 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-----FIHRDIAARNCLLTCPGPGRV 222 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEESCSSTTCC
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCChhhEEEecCCCCce
Confidence 77999999999999999987642 2245999999999999999999999998 99999999999999554 5
Q ss_pred eEEccccccccccCCc-eeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHH
Q 007788 456 PLIADCGLHKLLADDI-VFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 533 (589)
+||+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....... ...
T Consensus 223 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~-----~~~ 297 (367)
T 3l9p_A 223 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----VLE 297 (367)
T ss_dssp EEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHH
T ss_pred EEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHH
Confidence 9999999997543211 111223346788999999999999999999999999999998 999997543221 112
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+........+...+..+.+++..||+.||++||++.+++++|+.+.+..
T Consensus 298 ~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 22222222334455677999999999999999999999999999887653
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-43 Score=363.95 Aligned_cols=270 Identities=21% Similarity=0.353 Sum_probs=217.8
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeee
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 375 (589)
.++....++|...+.||+|+||.||+|... +++.||||+++..........|.+|+.++++++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344556788999999999999999999975 34899999998765555567899999999999999999999998
Q ss_pred ecCCCCeEEEEEEeCCCCChHHHhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCC
Q 007788 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGS--------------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435 (589)
Q Consensus 376 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 435 (589)
.. .+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+.+
T Consensus 120 ~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--- 194 (343)
T 1luf_A 120 AV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--- 194 (343)
T ss_dssp CS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred cc--CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence 44 56789999999999999999864311 145999999999999999999999988
Q ss_pred CCeEecCCCCCCeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-
Q 007788 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT- 513 (589)
Q Consensus 436 ~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt- 513 (589)
|+||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||+|
T Consensus 195 --ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 272 (343)
T 1luf_A 195 --FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 272 (343)
T ss_dssp --CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred --eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc
Confidence 99999999999999999999999999976543321 12233456788999999998899999999999999999999
Q ss_pred CCCCcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 514 GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 514 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
|+.||........ ...+.+. .....+...+..+.+++..||+.||++||++.+++++|+.+.+..
T Consensus 273 g~~p~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 273 GLQPYYGMAHEEV----IYYVRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TCCTTTTSCHHHH----HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCcCCCCChHHH----HHHHhCC-CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 9999975432211 1111111 112234455678999999999999999999999999999987654
No 44
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.7e-43 Score=381.21 Aligned_cols=259 Identities=22% Similarity=0.420 Sum_probs=217.2
Q ss_pred hhccCccccccccCCCccEEEEEecC-CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..++|...+.||+|+||.||+|.++. +..||||+++... ....+|.+|+.++++++|||||+++++|.. .+..++
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 293 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYI 293 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSSCEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEec--CCcEEE
Confidence 34668888999999999999999874 8899999997653 245689999999999999999999999944 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++..... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 294 v~E~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKKN-----FIHRNLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp EEECCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred EEEccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCChhhEEECCCCcEEEeecccce
Confidence 9999999999999986432 34899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
..............+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... ...+.+........+
T Consensus 367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 441 (495)
T 1opk_A 367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMERP 441 (495)
T ss_dssp CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCCC
T ss_pred eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCC
Confidence 876544333334455678999999998899999999999999999999 88888654321 122333334444455
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
..++..+.+++..||+.||++|||+.++++.|+.+.+
T Consensus 442 ~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 5667789999999999999999999999999987643
No 45
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-43 Score=352.21 Aligned_cols=259 Identities=21% Similarity=0.383 Sum_probs=201.7
Q ss_pred hccCccccccccCCCccEEEEEecC----CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|+..+.||+|+||.||+|.... +..||+|++...........|.+|+.++++++||||+++++++. .+..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT---ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC---SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc---cCcc
Confidence 4678888999999999999998742 56799999887655555678999999999999999999999973 2567
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESKR-----FVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEEETTEEEECC---
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eecccccHHHEEECCCCCEEECcccc
Confidence 89999999999999997653 24899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
++..............+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+ .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~----~~~~i-~~~~~~~ 237 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND----VIGRI-ENGERLP 237 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHH-HTTCCCC
T ss_pred ccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH----HHHHH-HcCCCCC
Confidence 98776543333334456678999999998899999999999999999997 888986543211 11111 1112223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.+...+..+.+++..||+.||++|||+.|++++|+.+.+.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 238 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 3445567899999999999999999999999999987654
No 46
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.2e-43 Score=353.73 Aligned_cols=257 Identities=23% Similarity=0.374 Sum_probs=200.9
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhc--cCCCCccceeeeeecC--CCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS--LRHENIIRLRGFCCSR--GRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~--~~~~~ 383 (589)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++... .....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46788899999999999999998 6899999998643 34456667666665 7999999999987543 23468
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhc--------CCCCCCCCeEecCCCCCCeeecCCCc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH--------SSEVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
++||||+++|+|.++++.. .+++..+++++.|++.||+||| +.+ |+||||||+|||++.++.
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-----ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-----IAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-----EECSCCCGGGEEECTTSC
T ss_pred EEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-----eecCCCChHhEEEcCCCC
Confidence 9999999999999999543 4899999999999999999999 665 999999999999999999
Q ss_pred eEEccccccccccCCceee---eecCCccccccCcccccCC------CCCCcchhhhHHHHHHHHHhC----------CC
Q 007788 456 PLIADCGLHKLLADDIVFS---VLKTSAAMGYLAPEYVTTG------RFTERSDIFAFGVIILQILTG----------SL 516 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~s~Gvvl~elltg----------~~ 516 (589)
+||+|||+++......... .....+|+.|+|||.+.+. .++.++|||||||++|||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 9999999997665433221 1223688899999999876 455799999999999999999 77
Q ss_pred CcchhHHHHHhhhhHHHhh-ccccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 517 VLTSSMRLAAESATFENFI-DRNLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 517 p~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
||................. ........ .......+.+++..||+.||++|||+.|+++.|+.+
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 7754321111111111111 11111111 235678899999999999999999999999999875
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=365.80 Aligned_cols=264 Identities=24% Similarity=0.392 Sum_probs=216.4
Q ss_pred hhccCccccccccCCCccEEEEEec--------CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeec
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCS 377 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 377 (589)
..++|...+.||+|+||.||+|... .+..||||++...........+.+|+++++++ +||||+++++++.
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~- 145 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT- 145 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec-
Confidence 3467888999999999999999862 34689999998776556667899999999999 8999999999994
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCC------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCC
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGS------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSV 445 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~ 445 (589)
..+..++||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+.+ |+||||||
T Consensus 146 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp 219 (382)
T 3tt0_A 146 -QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-----CIHRDLAA 219 (382)
T ss_dssp -SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCG
T ss_pred -cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCc
Confidence 356789999999999999999875421 235999999999999999999999988 99999999
Q ss_pred CCeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHH
Q 007788 446 EKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMR 523 (589)
Q Consensus 446 ~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~ 523 (589)
+|||+++++.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred ceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654221 12233446778999999999999999999999999999999 9999865432
Q ss_pred HHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 524 LAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
. .....+........+......+.+++..||+.||++|||++|++++|+.+...
T Consensus 300 ~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 300 E-----ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp H-----HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 1 11222222223333445567899999999999999999999999999987644
No 48
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.2e-43 Score=352.86 Aligned_cols=261 Identities=21% Similarity=0.347 Sum_probs=205.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||.||+|... +++.||+|++..... ......|.+|+.++.+++||||+++++++. ..+..++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~--~~~~~~l 88 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE--EDDCYYL 88 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE--CSSEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee--eCCeEEE
Confidence 57888899999999999999975 689999999865432 333467999999999999999999999984 4578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 89 v~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 159 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDMR-----IVHRDIKPQNILIDSNKTLKIFDFGIAK 159 (294)
T ss_dssp EEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred EEeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence 999999999999998654 4899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
..............+|+.|+|||.+.+..++.++||||||+++|||+||+.||.................. ........
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (294)
T 4eqm_A 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRK 238 (294)
T ss_dssp TC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCT
T ss_pred ccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-Ccchhccc
Confidence 77554333333455888999999999999999999999999999999999999765432211111110000 00001122
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhc
Q 007788 546 SEAAKLGKMALVCTHEDPENRP-TMEAVIEELTVAAP 581 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RP-s~~evl~~L~~~~~ 581 (589)
..+..+.+++.+|++.||++|| +++++.+.|+.+..
T Consensus 239 ~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 239 DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 3456799999999999999998 99999999987643
No 49
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.2e-43 Score=358.02 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=209.4
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ......+.+|++++++++||||+++++++. ..+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE--TEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--ECCEEEE
Confidence 45788899999999999999997 4799999999976542 344567889999999999999999999984 3578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 92 v~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~~-----ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQKR-----IVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp EECCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred EEECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 999999999999997664 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCC-CcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
...... ......+|+.|+|||.+.+..+. .++|||||||++|||++|+.||.+....... ..+..... ..+
T Consensus 163 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~i~~~~~--~~p 234 (328)
T 3fe3_A 163 EFTVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR----ERVLRGKY--RIP 234 (328)
T ss_dssp GGSSSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCC--CCC
T ss_pred ecCCCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCC--CCC
Confidence 665432 12345688899999999988875 7999999999999999999999765332111 11222111 223
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+..+.+++.+|++.||.+|||++|++++-+..
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~ 269 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWIN 269 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTT
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhc
Confidence 34456788999999999999999999999986653
No 50
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.2e-43 Score=355.23 Aligned_cols=264 Identities=22% Similarity=0.394 Sum_probs=215.7
Q ss_pred hhccCccccccccCCCccEEEEEe------cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
..++|...+.||+|+||.||+|.. .+++.||||++.........+.+.+|++++++++||||+++++++.. .
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 98 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--D 98 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--S
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec--C
Confidence 356788889999999999999986 24589999999876555566789999999999999999999999843 5
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcC--------------------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEe
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEG--------------------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVH 440 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH 440 (589)
+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH 173 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-----LVH 173 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-----EEC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-----Ccc
Confidence 678999999999999999986542 1234889999999999999999999988 999
Q ss_pred cCCCCCCeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCc
Q 007788 441 RNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVL 518 (589)
Q Consensus 441 ~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~ 518 (589)
|||||+||+++.++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987654322 12233446678999999998889999999999999999999 99998
Q ss_pred chhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 519 TSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...... .....+........+...+..+.+++..||+.||++||++.|++++|+.+...
T Consensus 254 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 254 PGIPPE-----RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp TTCCGG-----GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCHH-----HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 654321 11222222223334445567899999999999999999999999999987643
No 51
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-42 Score=353.89 Aligned_cols=263 Identities=23% Similarity=0.400 Sum_probs=217.5
Q ss_pred CccccccccCCCccEEEEEec-----CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 311 FSEVNLLGKGNFSSVYKGTLR-----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 311 f~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
|+..+.||+|+||.||++.+. +++.||||++...........|.+|++++++++||||+++++++.+......++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 377899999999999998753 688999999987655556678999999999999999999999997766678899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... +++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~~-----ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQH-----YIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCchheEEEcCCCCEEECCccccc
Confidence 999999999999997542 899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCcee--eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH----------HhhhhHHH
Q 007788 466 LLADDIVF--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA----------AESATFEN 533 (589)
Q Consensus 466 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~----------~~~~~~~~ 533 (589)
........ ......++..|+|||.+.+..++.++||||||+++|||+||+.||....... .......+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 77543321 2233456778999999998899999999999999999999999997543211 11112333
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+........+...+..+.+++..||+.||++|||++|+++.|+.+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 34444444455566788999999999999999999999999999876543
No 52
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.5e-43 Score=377.61 Aligned_cols=260 Identities=24% Similarity=0.429 Sum_probs=209.2
Q ss_pred HhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
...++|...+.||+|+||.||+|.++++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~~i 255 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYI 255 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---CceEE
Confidence 3456788889999999999999999888899999998654 234679999999999999999999999843 56899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++....+ ..+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 256 v~e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~-----ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN-----YVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp EECCCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred EehhhcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCChhhEEECCCCCEEECCCccce
Confidence 9999999999999976432 24899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
..............+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... ....+....+...+
T Consensus 329 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~~~ 403 (452)
T 1fmk_A 329 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQVERGYRMPCP 403 (452)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCC
T ss_pred ecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCC
Confidence 765443323334456778999999999999999999999999999999 899986543211 11112222333445
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..++..+.+++..||+.||++|||++++++.|+.+...
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 56677899999999999999999999999999987543
No 53
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8e-43 Score=351.94 Aligned_cols=264 Identities=26% Similarity=0.426 Sum_probs=211.2
Q ss_pred ccCccccccccCCCccEEEEEe-----cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|++ .+++.||||++...........+.+|++++.+++||||+++++++.....+..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577789999999999999984 36899999999866545556789999999999999999999999976655778
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSRQ-----YVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcCC-----cccCCCchheEEEcCCCCEEECcccc
Confidence 999999999999999976543 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH----------hhhhH
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA----------ESATF 531 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~----------~~~~~ 531 (589)
+........ .......++..|+|||.+.+..++.++||||||+++|||+||+.|+........ .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987654432 122234567779999999998999999999999999999999998754322110 11112
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+........+...+..+.+++..||+.||++|||+.|+++.|+.+-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2222223333344556678999999999999999999999999998753
No 54
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-42 Score=344.87 Aligned_cols=257 Identities=20% Similarity=0.354 Sum_probs=211.5
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|+.+ ++.||||++..... ....+.|.+|+.++++++||||+++++++.....+..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888899999999999999985 88999999986543 34456799999999999999999999999665557889999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTLE---PLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTSS---SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcCC---CceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999999999986432 35899999999999999999999865 56999999999999999999999998887654
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCC---cchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTE---RSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
... ...+|+.|+|||.+.+..++. ++||||||+++|||+||+.||........ .............+
T Consensus 164 ~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~ 233 (271)
T 3kmu_A 164 QSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----GMKVALEGLRPTIP 233 (271)
T ss_dssp SCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----HHHHHHSCCCCCCC
T ss_pred ccc------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----HHHHHhcCCCCCCC
Confidence 322 235678899999998765544 79999999999999999999975433221 12222223333444
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
...+..+.+++..||+.||++|||++|+++.|+.+..
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 5566789999999999999999999999999998764
No 55
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=350.41 Aligned_cols=255 Identities=18% Similarity=0.272 Sum_probs=201.5
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-------------------------hHHHHHHHHHHHHhc
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-------------------------SEEAEFVKGLYLLTS 362 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-------------------------~~~~~~~~e~~~l~~ 362 (589)
++|...+.||+|+||.||+|... +++.||||++...... .....+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888899999999999999975 6899999999754311 112468899999999
Q ss_pred cCCCCccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecC
Q 007788 363 LRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRN 442 (589)
Q Consensus 363 l~H~niv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~d 442 (589)
++||||+++++++.....+..++||||+++++|.+++.. ..+++..++.++.|++.||+|||+.+ |+|||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~D 162 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQK-----IIHRD 162 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccC
Confidence 999999999999976556789999999999999887543 24999999999999999999999988 99999
Q ss_pred CCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCCC---CCCcchhhhHHHHHHHHHhCCCCcc
Q 007788 443 LSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR---FTERSDIFAFGVIILQILTGSLVLT 519 (589)
Q Consensus 443 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~s~Gvvl~elltg~~p~~ 519 (589)
|||+||+++.++.+||+|||+++....... ......+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||.
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 241 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 999999999999999999999987654322 223456889999999998765 3778999999999999999999997
Q ss_pred hhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 520 SSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
........ ..+.............+..+.+++.+||+.||++|||+.|++++-+.
T Consensus 242 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~ 296 (298)
T 2zv2_A 242 DERIMCLH----SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296 (298)
T ss_dssp CSSHHHHH----HHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred CccHHHHH----HHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence 54322111 11111111111122345678999999999999999999999987653
No 56
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-43 Score=361.39 Aligned_cols=270 Identities=24% Similarity=0.383 Sum_probs=212.4
Q ss_pred HHhhccCccccccccCCCccEEEEEe------cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeec
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCS 377 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 377 (589)
+...++|...+.||+|+||.||+|.. .++..||||++...........+.+|+.++.++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34557889999999999999999996 246789999998654444557899999999999 89999999999854
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCC-------------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCe
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGS-------------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAI 438 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~i 438 (589)
.+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+.+ |
T Consensus 121 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-----i 193 (344)
T 1rjb_A 121 --SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-----C 193 (344)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-----E
T ss_pred --CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-----c
Confidence 46789999999999999999765321 134899999999999999999999988 9
Q ss_pred EecCCCCCCeeecCCCceEEccccccccccCCcee-eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCC
Q 007788 439 VHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSL 516 (589)
Q Consensus 439 vH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~ 516 (589)
+||||||+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||+| |..
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999876543221 2223345778999999999999999999999999999998 999
Q ss_pred CcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccccc
Q 007788 517 VLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMAT 585 (589)
Q Consensus 517 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~~ 585 (589)
||...... ......+........+...+..+.+++..||+.||++|||+.|++++|+.+......
T Consensus 274 p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 274 PYPGIPVD----ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp SSTTCCCS----HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred CcccCCcH----HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 99654221 112222333333334445567899999999999999999999999999987665443
No 57
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-42 Score=370.04 Aligned_cols=255 Identities=23% Similarity=0.421 Sum_probs=211.1
Q ss_pred hhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
..++|...+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++... .+..++|
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~iv 265 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 265 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-TSCEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-CCceEEE
Confidence 4567888899999999999999986 7899999997653 346799999999999999999999998653 3468999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 266 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~-----ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 338 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN-----FVHRDLAARNVLVSEDNVAKVSDFGLTKE 338 (450)
T ss_dssp EECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence 999999999999987642 24789999999999999999999988 99999999999999999999999999985
Q ss_pred ccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||...... .....+....+...+.
T Consensus 339 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~p~ 409 (450)
T 1k9a_A 339 ASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPD 409 (450)
T ss_dssp CC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----THHHHHHTTCCCCCCT
T ss_pred ccccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCC
Confidence 43321 12345778999999999999999999999999999999 99999654221 1112222233334455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.++..+.+++..||+.||++|||+.++++.|+.+...
T Consensus 410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 6678899999999999999999999999999987643
No 58
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.4e-42 Score=354.80 Aligned_cols=257 Identities=18% Similarity=0.305 Sum_probs=205.4
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC------
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR------ 380 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~------ 380 (589)
.++|+..+.||+|+||.||+|+.. +|+.||||++.........+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357888999999999999999986 7999999999866555566789999999999999999999998865422
Q ss_pred -------------------------------------------------CeEEEEEEeCCCCChHHHhhhhcCCCCCCCH
Q 007788 381 -------------------------------------------------GECFLIYDFAPKGKLSKYLDQEEGSSNVLDW 411 (589)
Q Consensus 381 -------------------------------------------------~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~ 411 (589)
...++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 137999999999999999986543 234678
Q ss_pred HHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccccCCce-----------eeeecCCc
Q 007788 412 STRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-----------FSVLKTSA 480 (589)
Q Consensus 412 ~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~~ 480 (589)
..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... .......+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSKG-----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred HHHHHHHHHHHHHHHHHHhCC-----eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 889999999999999999988 99999999999999999999999999987754321 11223457
Q ss_pred cccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcc
Q 007788 481 AMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTH 560 (589)
Q Consensus 481 ~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~ 560 (589)
|+.|+|||.+.+..++.++||||||+++|||++|..|+........ ..... ............+.+++..||+
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~li~~~l~ 311 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIIT------DVRNL-KFPLLFTQKYPQEHMMVQDMLS 311 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHH------HHHTT-CCCHHHHHHCHHHHHHHHHHHC
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHH------Hhhcc-CCCcccccCChhHHHHHHHHcc
Confidence 8899999999999999999999999999999999877643322111 11111 1111123445677899999999
Q ss_pred cCCCCCCCHHHHHHHHH
Q 007788 561 EDPENRPTMEAVIEELT 577 (589)
Q Consensus 561 ~dp~~RPs~~evl~~L~ 577 (589)
.||++|||++|++++-+
T Consensus 312 ~~p~~Rps~~~~l~~~~ 328 (332)
T 3qd2_B 312 PSPTERPEATDIIENAI 328 (332)
T ss_dssp SSGGGSCCHHHHHHSTT
T ss_pred CCCCcCCCHHHHhhchh
Confidence 99999999999998644
No 59
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-42 Score=347.18 Aligned_cols=260 Identities=22% Similarity=0.386 Sum_probs=209.1
Q ss_pred hccCccccccccCCCccEEEEEecC----CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|...+.||+|+||.||+|...+ +..||||.+...........|.+|+.++++++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS---SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCC
Confidence 4678888999999999999998643 346999999876555566789999999999999999999999743 456
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESIN-----CVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred EEEEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCccceEEECCCCcEEeCccCC
Confidence 899999999999999976542 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
+...............++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-----~~~~~~~~~~~~ 234 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-----VIGVLEKGDRLP 234 (281)
T ss_dssp GGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-----HHHHHHHTCCCC
T ss_pred CcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-----HHHHHhcCCCCC
Confidence 98776544333344556778999999998899999999999999999998 999996432211 111111112222
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+...+..+.+++..||+.||++||++.|++++|+.+.+..
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 33445667999999999999999999999999999876543
No 60
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.7e-42 Score=354.58 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=207.6
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC--CchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||.||+|+.+ +|+.||+|+++... .......+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~l 82 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCF 82 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe--CCEEEE
Confidence 57888999999999999999976 68999999997542 12344678899999999999999999999854 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 83 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 83 VMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSRD-----VVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp EEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCcCCHHHEEECCCCCEEEeeccchh
Confidence 999999999999998654 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
....... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... ..+.
T Consensus 154 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~--~~p~ 226 (337)
T 1o6l_A 154 EGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILMEEI--RFPR 226 (337)
T ss_dssp CSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CCCT
T ss_pred hcccCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH----HHHHHcCCC--CCCC
Confidence 6432211 12234578899999999999999999999999999999999999976433211 112222221 2334
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHh
Q 007788 546 SEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTV 578 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~ 578 (589)
..+..+.+++..|++.||++|| +++|++++-+.
T Consensus 227 ~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 4566789999999999999999 99999987654
No 61
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.9e-43 Score=345.82 Aligned_cols=256 Identities=22% Similarity=0.451 Sum_probs=211.7
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 388 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~E 388 (589)
++|...+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.. .+..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 83 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVTE 83 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSCEEEEC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CCCeEEEEe
Confidence 56788899999999999999998899999999986542 34679999999999999999999999844 467899999
Q ss_pred eCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccccc
Q 007788 389 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLA 468 (589)
Q Consensus 389 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~ 468 (589)
|+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC-----VIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp CCTTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCCCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCchheEEECCCCCEEEcccccccccc
Confidence 9999999999976532 4899999999999999999999988 9999999999999999999999999998765
Q ss_pred CCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHHH
Q 007788 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547 (589)
Q Consensus 469 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (589)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+ ........+...
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~----~~~i-~~~~~~~~~~~~ 230 (267)
T 3t9t_A 156 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV----VEDI-STGFRLYKPRLA 230 (267)
T ss_dssp CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHHH-HTTCCCCCCTTS
T ss_pred cccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH----HHHH-hcCCcCCCCccC
Confidence 432222233445678999999998899999999999999999999 8999865432111 1111 111222233344
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
+..+.+++..||+.||++||++++++++|+.+.+
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 6678999999999999999999999999998865
No 62
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-42 Score=354.47 Aligned_cols=264 Identities=25% Similarity=0.422 Sum_probs=217.3
Q ss_pred ccCccccccccCCCccEEEEEe-----cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++...+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788889999999999999984 368899999997654 4455679999999999999999999999876666789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSRR-----CVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEEETTEEEECCGGG
T ss_pred EEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCChhhEEECCCCCEEEccccc
Confidence 999999999999999986543 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCcee--eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh----------hhhH
Q 007788 464 HKLLADDIVF--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE----------SATF 531 (589)
Q Consensus 464 a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~----------~~~~ 531 (589)
+......... ......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 9876543321 222344677799999999888999999999999999999999999754332110 1122
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
...+........+...+..+.+++..||+.||++|||++|++++|+.+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 23333334444555667889999999999999999999999999987643
No 63
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.3e-42 Score=352.26 Aligned_cols=265 Identities=23% Similarity=0.395 Sum_probs=216.0
Q ss_pred hhccCccccccccCCCccEEEEEe------cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 379 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 379 (589)
..++|...+.||+|+||.||+|.. .+++.||||++.........+.+.+|++++.++ +||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 446788899999999999999985 257899999998765455567899999999999 99999999999844
Q ss_pred CCeEEEEEEeCCCCChHHHhhhhcCC--------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCC
Q 007788 380 RGECFLIYDFAPKGKLSKYLDQEEGS--------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSV 445 (589)
Q Consensus 380 ~~~~~lv~Ey~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~ 445 (589)
.+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||||
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp 173 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-----CIHRDLAA 173 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCcc
Confidence 46789999999999999999865421 224899999999999999999999988 99999999
Q ss_pred CCeeecCCCceEEccccccccccCCceee-eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHH
Q 007788 446 EKVLIDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMR 523 (589)
Q Consensus 446 ~Nill~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~ 523 (589)
+||+++.++.+||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 99999999999999999998775443222 223345678999999999999999999999999999999 9999865422
Q ss_pred HHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 524 LAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.. .....+........+...+..+.+++..||+.||++|||+.|++++|+.+...
T Consensus 254 ~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 254 DS----KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp SH----HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hh----HHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 11222222233333445567899999999999999999999999999987654
No 64
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.6e-43 Score=350.03 Aligned_cols=261 Identities=21% Similarity=0.403 Sum_probs=217.6
Q ss_pred HhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
...++|+..+.||+|+||.||+|... ++..||||++... ....+.+.+|++++++++||||+++++++. ..+..+
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~ 85 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--REPPFY 85 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSSEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEc--cCCCEE
Confidence 34567888999999999999999986 4889999999764 345568999999999999999999999984 457789
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKKN-----FIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHHT-----CCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred EEEEcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHCC-----ccCCCCCcceEEEcCCCCEEEccCccc
Confidence 99999999999999976432 35899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
...............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 233 (288)
T 3kfa_A 159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYELLEKDYRMER 233 (288)
T ss_dssp GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHHHTTCCCCC
T ss_pred eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhccCCCCC
Confidence 8876554444444556778999999999999999999999999999999 88888654321 11222223333344
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
+...+..+.+++..|++.||++|||+.|+++.|+.+.+.
T Consensus 234 ~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 455567899999999999999999999999999876543
No 65
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.4e-43 Score=356.82 Aligned_cols=258 Identities=19% Similarity=0.306 Sum_probs=205.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|+..+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++.+ .+..++||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~ 84 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE--GNIQYLFL 84 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec--CCeEEEEE
Confidence 57888999999999999999976 7899999999765544445678899999999999999999999854 57889999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+
T Consensus 85 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~g-----ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 85 EYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATVF 155 (323)
T ss_dssp ECCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EcCCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccccchHHEEEeCCCCEEEEEeecccee
Confidence 9999999999997543 4899999999999999999999988 999999999999999999999999999866
Q ss_pred cCCce-eeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 468 ADDIV-FSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 468 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
..... .......+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ................
T Consensus 156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~ 232 (323)
T 3tki_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPWK 232 (323)
T ss_dssp EETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH---HHHHHHTTCTTSTTGG
T ss_pred ccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHHhcccccCCccc
Confidence 43321 12234568889999999987775 7799999999999999999999975432111 1111111111111123
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.....+.+++.+|++.||++|||+.|++++.+...
T Consensus 233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 267 (323)
T 3tki_A 233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (323)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence 44567889999999999999999999999877643
No 66
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=5.3e-42 Score=343.39 Aligned_cols=255 Identities=26% Similarity=0.489 Sum_probs=205.6
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHH------HHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEE------AEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~------~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
++|+..+.||+|+||.||+|... +++.||||++......... +.|.+|++++++++||||+++++++.. .
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--P- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT--T-
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC--C-
Confidence 56788899999999999999975 7899999998754432111 578999999999999999999999833 2
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc-----e
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN-----P 456 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~-----~ 456 (589)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++. +
T Consensus 96 -~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 96 -PRMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQN---PPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp -TEEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTSS---SCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred -CeEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhCC---CCeecCCCCcceEEEeccCCCCceeE
Confidence 279999999999999887543 24999999999999999999999875 46999999999999988776 9
Q ss_pred EEccccccccccCCceeeeecCCccccccCccccc--CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHh
Q 007788 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT--TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534 (589)
Q Consensus 457 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 534 (589)
||+|||+++..... .....++..|+|||.+. ...++.++||||||+++|||++|+.||........ ......
T Consensus 169 kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~ 242 (287)
T 4f0f_A 169 KVADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMI 242 (287)
T ss_dssp EECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHH
T ss_pred EeCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHH
Confidence 99999999865442 23456788999999984 45578999999999999999999999965322111 111222
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 535 IDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 535 ~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.........+...+..+.+++..||+.||++|||++|+++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 223333444556677899999999999999999999999999863
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8e-43 Score=347.85 Aligned_cols=259 Identities=24% Similarity=0.433 Sum_probs=213.2
Q ss_pred HhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
...++|+..+.||+|+||.||+|...++..||||++.... ...+.|.+|++++++++||||+++++++.. +..++
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 84 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPIYI 84 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEcC---CCcEE
Confidence 3456788899999999999999999888899999997653 235679999999999999999999998842 45899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.
T Consensus 85 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEERN-----YIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp EEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 9999999999999975431 13899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
..............++..|+|||.+.+..++.++||||||+++|||++ |+.||........ ...+........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 232 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV-----IQNLERGYRMVRP 232 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----HHHHHTTCCCCCC
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH-----HHHHhcccCCCCc
Confidence 776544333334456678999999988889999999999999999999 8999865432211 1111122222334
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
...+..+.+++..|++.||++|||++++++.|+.+..
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 4556789999999999999999999999999987653
No 68
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5e-43 Score=349.28 Aligned_cols=270 Identities=17% Similarity=0.299 Sum_probs=213.9
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++||||+++++++.....+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999976 789999999976543 344567999999999999999999999887655678999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++.........+++..++.++.|++.||+|||+.+....+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999876544456999999999999999999999865223459999999999999999999999999988
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
....... ......++..|+|||.+.+..++.++||||||+++|||+||+.||......... ..+.. ......+.
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~i~~-~~~~~~~~ 238 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA----GKIRE-GKFRRIPY 238 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHH-TCCCCCCT
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHH----HHHhh-cccccCCc
Confidence 6643221 111234678899999999989999999999999999999999999764322111 11111 11122334
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..+..+.+++..||+.||++||++.|++++++..++..
T Consensus 239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 45678999999999999999999999999998876543
No 69
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.4e-42 Score=352.67 Aligned_cols=263 Identities=24% Similarity=0.419 Sum_probs=213.4
Q ss_pred hccCccccccccCCCccEEEEEec--------CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSR 378 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 378 (589)
.++|...+.||+|+||.||+|... ++..||||++...........+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 467888999999999999999863 46789999998765555667899999999999 89999999999844
Q ss_pred CCCeEEEEEEeCCCCChHHHhhhhcCC------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCC
Q 007788 379 GRGECFLIYDFAPKGKLSKYLDQEEGS------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVE 446 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~ 446 (589)
.+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+.+ |+||||||+
T Consensus 113 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~ 186 (334)
T 2pvf_A 113 -DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-----CIHRDLAAR 186 (334)
T ss_dssp -SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGG
T ss_pred -CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCccc
Confidence 46789999999999999999865421 234899999999999999999999988 999999999
Q ss_pred CeeecCCCceEEccccccccccCCcee-eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHH
Q 007788 447 KVLIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRL 524 (589)
Q Consensus 447 Nill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~ 524 (589)
||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 266 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH
Confidence 999999999999999999876543321 2233446778999999988889999999999999999999 99998654321
Q ss_pred HHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 525 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
. ....+........+...+..+.+++..||+.||++||++.|++++|+.+...
T Consensus 267 ~-----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 267 E-----LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp H-----HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H-----HHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 1111112222233445567899999999999999999999999999987654
No 70
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-42 Score=351.00 Aligned_cols=259 Identities=23% Similarity=0.471 Sum_probs=205.1
Q ss_pred ccCccccccccCCCccEEEEEecC-----CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRD-----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|...+.||+|+||.||+|.... +..||||++...........|.+|++++++++||||+++++++. ..+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS--KYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe--cCCCc
Confidence 467778899999999999998753 34699999987654555678999999999999999999999984 45789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dikp~NIl~~~~~~~kl~Dfg~ 193 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANMN-----YVHRDLAARNILVNSNLVCKVSDFGL 193 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred EEEEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCChheEEECCCCcEEECCCCc
Confidence 999999999999999976532 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-----~~~~~~~~~~ 268 (333)
T 1mqb_A 194 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-----VMKAINDGFR 268 (333)
T ss_dssp -----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHHHHHTTCC
T ss_pred chhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHHCCCc
Confidence 987654321 11223345678999999999999999999999999999999 999996543211 1111222222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+...+..+.+++..||+.||++||++.+++++|+.+...
T Consensus 269 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 233445567899999999999999999999999999876544
No 71
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-42 Score=357.49 Aligned_cols=253 Identities=22% Similarity=0.338 Sum_probs=207.9
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCch-----HHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-----EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
.++|...+.||+|+||.||+|... +|+.||||++....... ....+.+|+.++.+++||||+++++++.. .+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~ 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN--RT 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SS
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe--CC
Confidence 357888999999999999999976 68999999997654321 34678999999999999999999999843 57
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC----ceE
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF----NPL 457 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~----~~k 457 (589)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+|
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~~~~~~~vk 159 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTKK-----IAHFDLKPENIMLLDKNIPIPHIK 159 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEESCTTSSSCCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEeCCCCCccCEE
Confidence 8999999999999999997543 4899999999999999999999988 99999999999998877 799
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
|+|||+++....... .....+|+.|+|||++.+..++.++|||||||++|||++|..||.+...... +..+...
T Consensus 160 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~----~~~i~~~ 233 (361)
T 2yab_A 160 LIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET----LANITAV 233 (361)
T ss_dssp ECCCSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH----HHHHHTT
T ss_pred EEecCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhc
Confidence 999999987654321 2334588999999999999999999999999999999999999976433211 1111111
Q ss_pred ccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 538 NLKGKFSE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 538 ~~~~~~~~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.. ..+. ..+..+.+++..|+..||++|||+.|++++-+..
T Consensus 234 ~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 234 SY--DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp CC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred CC--CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 11 1121 2356788999999999999999999999876643
No 72
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.4e-42 Score=352.43 Aligned_cols=275 Identities=22% Similarity=0.383 Sum_probs=220.7
Q ss_pred ccCHHHHHHhhccCccccccccCCCccEEEEEe------cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccc
Q 007788 298 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTL------RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIR 370 (589)
Q Consensus 298 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~ 370 (589)
.+...++....++|...+.||+|+||.||+|.. .+++.||||++...........+.+|++++.++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 455566777788999999999999999999984 356899999998766555567899999999999 7999999
Q ss_pred eeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCC------------CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCe
Q 007788 371 LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGS------------SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAI 438 (589)
Q Consensus 371 l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~i 438 (589)
+++++... ....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+.+ |
T Consensus 96 ~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-----i 169 (316)
T 2xir_A 96 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-----C 169 (316)
T ss_dssp EEEEECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-----C
T ss_pred EEEEEecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-----c
Confidence 99998543 34689999999999999999865421 123889999999999999999999988 9
Q ss_pred EecCCCCCCeeecCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCC
Q 007788 439 VHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSL 516 (589)
Q Consensus 439 vH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~ 516 (589)
+||||||+||+++.++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987644322 22233446778999999999999999999999999999998 999
Q ss_pred CcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 517 VLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 517 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
||....... .....+........+......+.+++..||+.||++|||+.|++++|+.+.+.
T Consensus 250 p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 250 PYPGVKIDE----EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp SSTTCCCSH----HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcccchhH----HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 986532111 11111111222223334556789999999999999999999999999987654
No 73
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.5e-42 Score=357.24 Aligned_cols=258 Identities=19% Similarity=0.259 Sum_probs=199.9
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+++.. +++.||||++..... ....+.+|+.++++++||||+++++++.. .+..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEee--CCEEEEE
Confidence 357888899999999999999986 789999999976532 23468899999999999999999999954 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc--eEEcccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN--PLIADCGLH 464 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~--~kl~DfGla 464 (589)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++
T Consensus 95 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~~-----ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a 165 (361)
T 3uc3_A 95 MEYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSMQ-----ICHRDLKLENTLLDGSPAPRLKICDFGYS 165 (361)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCSCCCCGGGEEECSSSSCCEEECCCCCC
T ss_pred EEeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEcCCCCceEEEeecCcc
Confidence 99999999999997654 3899999999999999999999988 999999999999987766 999999998
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCc-chhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTER-SDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
+...... ......+|+.|+|||++.+..++.+ +|||||||++|||++|+.||...............+.........
T Consensus 166 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 166 KSSVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD 243 (361)
T ss_dssp -----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT
T ss_pred ccccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC
Confidence 7543221 1223457889999999988887666 899999999999999999997654322222223333332222222
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
....+..+.+++.+||+.||++|||+.|++++-+...
T Consensus 244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 244 DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 2234567899999999999999999999999977643
No 74
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-42 Score=342.84 Aligned_cols=255 Identities=25% Similarity=0.430 Sum_probs=197.8
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCc---hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK---SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|+..+.||+|+||.||+|... ++.||||++...... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 82 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK--EPNLC 82 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC--C--CE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec--CCceE
Confidence 357888899999999999999985 889999998754322 224678999999999999999999999843 46789
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC--------CCce
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ--------QFNP 456 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~--------~~~~ 456 (589)
+||||+++++|.+++... .+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++. ++.+
T Consensus 83 lv~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~--~~~i~H~dikp~Nil~~~~~~~~~~~~~~~ 155 (271)
T 3dtc_A 83 LVMEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEA--IVPIIHRDLKSSNILILQKVENGDLSNKIL 155 (271)
T ss_dssp EEEECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSS--SSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred EEEEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCC--CCceeecCCchHHEEEecccccccccCcce
Confidence 999999999999998633 4899999999999999999999876 234899999999999986 7789
Q ss_pred EEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc
Q 007788 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536 (589)
Q Consensus 457 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 536 (589)
||+|||++........ ....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ......
T Consensus 156 kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~ 228 (271)
T 3dtc_A 156 KITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV----AYGVAM 228 (271)
T ss_dssp EECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH----HHHHHT
T ss_pred EEccCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHhhhc
Confidence 9999999986654322 234578899999999998999999999999999999999999976433211 112222
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 537 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.......+...+..+.+++..||+.||++|||+.|++++|+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 2233334455567899999999999999999999999999853
No 75
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=353.40 Aligned_cols=253 Identities=17% Similarity=0.237 Sum_probs=209.1
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... +++.||+|.+... ......+.+|+.++++++||||+++++++.+ .+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFES--MEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE--TTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEec--CCEEEEE
Confidence 367888999999999999999976 6899999998754 3445678899999999999999999999854 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC--CCceEEcccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ--QFNPLIADCGLH 464 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfGla 464 (589)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 80 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~g-----ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a 151 (321)
T 1tki_A 80 FEFISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSHN-----IGHFDIRPENIIYQTRRSSTIKIIEFGQA 151 (321)
T ss_dssp ECCCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESSSSCCCEEECCCTTC
T ss_pred EEeCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC-----CCcCCCCHHHEEEccCCCCCEEEEECCCC
Confidence 99999999999997543 24899999999999999999999988 999999999999987 789999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
+....... .....+++.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...... .+
T Consensus 152 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~--~~ 223 (321)
T 1tki_A 152 RQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ----IIENIMNAEYT--FD 223 (321)
T ss_dssp EECCTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHTCCC--CC
T ss_pred eECCCCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH----HHHHHHcCCCC--CC
Confidence 87755432 223457889999999998889999999999999999999999997643321 11222222111 11
Q ss_pred H----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 545 E----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 545 ~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
. ..+..+.+++.+|++.||++|||+.|++++-+...
T Consensus 224 ~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 263 (321)
T 1tki_A 224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhcc
Confidence 1 23567899999999999999999999999887543
No 76
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-42 Score=346.68 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=197.6
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|+..+ .||||+++.... ....+.|.+|++++++++||||+++++++. .+..++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---APQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---CCccEEE
Confidence 4578888999999999999998753 599999976543 344577999999999999999999999763 3467999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 98 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~-----i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAKS-----IIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred EEecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccccCccceEEECCCCCEEEccceeccc
Confidence 99999999999997543 34899999999999999999999988 99999999999999999999999999976
Q ss_pred ccCCc-eeeeecCCccccccCccccc---CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 467 LADDI-VFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 467 ~~~~~-~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
..... ........++..|+|||.+. +..++.++||||||+++|||++|+.||........................
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTS
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhh
Confidence 54321 11223345788999999986 566888999999999999999999999754321111111111000001112
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
....++..+.+++..||+.||++|||+.++++.|+.+.+
T Consensus 250 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 250 VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 233456789999999999999999999999999998764
No 77
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.9e-43 Score=356.97 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=206.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCc----EEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|...+.||+|+||.||+|... +++ .||+|.+...........+.+|+.++++++||||+++++++. .+..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP---GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC---BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcc
Confidence 46778899999999999999965 444 388888865543344456788999999999999999999984 2568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++....+ .+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEEHG-----MVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSGG---GSCTTHHHHHHHHHHHHHHHHHHTT-----CCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred EEEEEeCCCCCHHHHHHHccc---cCCHHHHHHHHHHHHHHHHHHHhCC-----CCCCccchheEEECCCCeEEECCCCc
Confidence 999999999999999976532 4889999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 464 HKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 464 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
++....... .......++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+......
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 236 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA-----EVPDLLEKGERL 236 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT-----HHHHHHHTTCBC
T ss_pred ccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH-----HHHHHHHcCCCC
Confidence 987654321 12233456678999999999999999999999999999999 99999754321 112222222222
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..+...+..+.+++..||+.||++||+++|++++|+.+....
T Consensus 237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 333445567889999999999999999999999999886543
No 78
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=349.16 Aligned_cols=269 Identities=23% Similarity=0.381 Sum_probs=204.5
Q ss_pred HhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc--CCCCccceeeeeecCCC--C
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL--RHENIIRLRGFCCSRGR--G 381 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l--~H~niv~l~g~~~~~~~--~ 381 (589)
...++|...+.||+|+||.||+|+.. ++.||||++... ....+..|.+++... +||||+++++++..... .
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 34578999999999999999999986 899999998643 233455566665554 89999999999865433 5
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCC---CCCCCeEecCCCCCCeeecCCCceEE
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE---VNKPAIVHRNLSVEKVLIDQQFNPLI 458 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~---~~~~~ivH~dlk~~Nill~~~~~~kl 458 (589)
..++||||+++|+|.+++... .+++..++.++.|++.||+|||+.. ..++.|+||||||+|||++.++.+||
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred ceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 789999999999999999654 3899999999999999999999871 00123999999999999999999999
Q ss_pred ccccccccccCCceee---eecCCccccccCcccccCCCCCCc------chhhhHHHHHHHHHhC----------CCCcc
Q 007788 459 ADCGLHKLLADDIVFS---VLKTSAAMGYLAPEYVTTGRFTER------SDIFAFGVIILQILTG----------SLVLT 519 (589)
Q Consensus 459 ~DfGla~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~------~Dv~s~Gvvl~elltg----------~~p~~ 519 (589)
+|||+++......... .....+|+.|+|||.+.+..+..+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999997664432211 123468889999999988776665 9999999999999999 55554
Q ss_pred hhHHHHHhhhhHHHhh-ccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccc
Q 007788 520 SSMRLAAESATFENFI-DRNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 584 (589)
Q Consensus 520 ~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~ 584 (589)
...............+ ........+ ..+...+.+++..||+.||++|||+.|++++|+.+.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 3211111111111111 112222222 3678889999999999999999999999999999887654
No 79
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-42 Score=359.88 Aligned_cols=259 Identities=23% Similarity=0.439 Sum_probs=198.4
Q ss_pred cCccccccccCCCccEEEEEec--CC--cEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLR--DG--TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.|...+.||+|+||.||+|.+. ++ ..||||.++.........+|.+|+.++++++||||++++++|... .+..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-SSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CCCeEE
Confidence 4566789999999999999864 22 468999997665556678899999999999999999999987543 356789
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++
T Consensus 169 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp EEECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTCCEEECCC----
T ss_pred EEECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHCC-----EecCccchheEEECCCCCEEEeeccccc
Confidence 9999999999999975432 4889999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCcee---eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 466 LLADDIVF---SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 466 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
........ ......++..|+|||.+.+..++.++||||||+++|||+| |..||....... ....+......
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-----~~~~~~~~~~~ 315 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----ITVYLLQGRRL 315 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-----HHHHHHTTCCC
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-----HHHHHHcCCCC
Confidence 66443211 1223446678999999999999999999999999999999 556664432111 11111111122
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..+...+..+.+++..||+.||++||++.|++++|+.+...
T Consensus 316 ~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 316 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 23344567899999999999999999999999999987643
No 80
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.7e-43 Score=366.78 Aligned_cols=263 Identities=13% Similarity=0.224 Sum_probs=213.7
Q ss_pred HHHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeec
Q 007788 301 LEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCS 377 (589)
Q Consensus 301 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 377 (589)
+.++....++|...+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|+.+++.++|||||++++++.
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~- 139 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ- 139 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-
Confidence 4556667789999999999999999999986 589999999965221 112235789999999999999999999985
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
+.+..++||||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 140 -~~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~g-----ivHrDLKp~NILl~~~g~ik 208 (410)
T 3v8s_A 140 -DDRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMG-----FIHRDVKPDNMLLDKSGHLK 208 (410)
T ss_dssp -CSSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEE
T ss_pred -ECCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCCHHHeeECCCCCEE
Confidence 457899999999999999999753 2889999999999999999999988 99999999999999999999
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCC----CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHH
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR----FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 533 (589)
|+|||+++..............||+.|+|||++.+.. ++.++|||||||++|||+||+.||......... ..
T Consensus 209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~----~~ 284 (410)
T 3v8s_A 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY----SK 284 (410)
T ss_dssp ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HH
T ss_pred EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHH----HH
Confidence 9999999877655444444567899999999998765 789999999999999999999999765432222 22
Q ss_pred hhccc--cCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhh
Q 007788 534 FIDRN--LKGKFSESEAAKLGKMALVCTHEDPEN--RPTMEAVIEELTVA 579 (589)
Q Consensus 534 ~~~~~--~~~~~~~~~~~~l~~l~~~C~~~dp~~--RPs~~evl~~L~~~ 579 (589)
+.... +........+..+.+++..|++.+|.+ ||+++|+++|-+..
T Consensus 285 i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~ 334 (410)
T 3v8s_A 285 IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK 334 (410)
T ss_dssp HHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred HHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence 22111 111111234567889999999999988 99999999987764
No 81
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.6e-42 Score=347.45 Aligned_cols=259 Identities=20% Similarity=0.326 Sum_probs=201.0
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|...+|+.||||++..... ......+.+|++++++++||||+++++++. +.+..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH--SERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC--CSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc--cCCEEEEE
Confidence 367888999999999999999998899999999975532 233467889999999999999999999984 45789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 98 ~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~-----ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 98 FEFMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQHR-----ILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp EECCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EcCCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCchHhEEECCCCCEEEccCcCcee
Confidence 999974 8888887543 24899999999999999999999988 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH-------------
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE------------- 532 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~------------- 532 (589)
...... ......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 169 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 169 FGIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp TTSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred cCCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence 653321 2233457889999999876 5689999999999999999999999965432111111000
Q ss_pred ----HhhccccC--CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 533 ----NFIDRNLK--GKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 533 ----~~~~~~~~--~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
...+.... ... .+....++.+++..|++.||++|||++|++++-+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 304 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence 00000000 000 11224578899999999999999999999987654
No 82
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.2e-42 Score=355.28 Aligned_cols=256 Identities=19% Similarity=0.312 Sum_probs=207.7
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC----CchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS----CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|..+ +|+.||||++.... .......+.+|+.++++++||||+++++++.+ .+..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~ 101 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--DGML 101 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCEE
Confidence 57888999999999999999975 68999999986432 11235679999999999999999999999854 4789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc---eEEcc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---PLIAD 460 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 460 (589)
++||||+++|+|.+++.........+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-----ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-----IIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECSSSTTCCEEECC
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCChHHeEEecCCCCCcEEEec
Confidence 9999999999999988765433445899999999999999999999988 999999999999987654 99999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+......
T Consensus 177 fg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~i~~~~~~ 250 (351)
T 3c0i_A 177 FGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIKGKYK 250 (351)
T ss_dssp CTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-----HHHHHHHTCCC
T ss_pred CcceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-----HHHHHHcCCCC
Confidence 999987654322 122345889999999999999999999999999999999999999764321 11122221111
Q ss_pred CCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 541 GKFSE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 541 ~~~~~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
... ..+..+.+++.+||+.||++|||+.|++++-+..
T Consensus 251 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~ 291 (351)
T 3c0i_A 251 --MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291 (351)
T ss_dssp --CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred --CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence 111 2356789999999999999999999999876643
No 83
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.5e-43 Score=369.12 Aligned_cols=270 Identities=16% Similarity=0.217 Sum_probs=215.0
Q ss_pred cCHHHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeee
Q 007788 299 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFC 375 (589)
Q Consensus 299 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 375 (589)
..+.++...+++|+..+.||+|+||.||+|+.+ +++.||||++..... ......+.+|+.++.+++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 445667777899999999999999999999987 588999999975321 11223488999999999999999999998
Q ss_pred ecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc
Q 007788 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 376 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
.+ .+..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.
T Consensus 144 ~~--~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~g-----iiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 144 QD--DNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQLH-----YVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp EC--SSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSC
T ss_pred ee--CCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eEecccCHHHeeEcCCCC
Confidence 54 578999999999999999998643 24999999999999999999999988 999999999999999999
Q ss_pred eEEccccccccccCCceeeeecCCccccccCccccc-----CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh
Q 007788 456 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT 530 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~ 530 (589)
+||+|||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||............
T Consensus 214 vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i 293 (437)
T 4aw2_A 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293 (437)
T ss_dssp EEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred EEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh
Confidence 999999999876554443444457899999999987 567899999999999999999999999765432222111
Q ss_pred HHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCC--CCCHHHHHHHHHhh
Q 007788 531 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPEN--RPTMEAVIEELTVA 579 (589)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~--RPs~~evl~~L~~~ 579 (589)
......... .......+..+.+++.+|+..+|++ ||+++|++++-+..
T Consensus 294 ~~~~~~~~~-p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~ 343 (437)
T 4aw2_A 294 MNHKERFQF-PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFS 343 (437)
T ss_dssp HTHHHHCCC-CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred hhccccccC-CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence 111000011 1111224567889999999888888 99999999987653
No 84
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=353.00 Aligned_cols=260 Identities=24% Similarity=0.419 Sum_probs=207.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCc----EEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGT----LVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++|+..+.||+|+||.||+|... +++ .||+|.+...........+.+|+.++++++||||+++++++.. +..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~ 91 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---STV 91 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES---SSE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec---CCc
Confidence 57888899999999999999964 444 4688888765555566789999999999999999999999864 347
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++|+||+++|+|.+++..... .+++..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dikp~NIl~~~~~~~kL~DfG~ 163 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDRR-----LVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred eEEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhCC-----CcCCCCCHHHEEEcCCCCEEEccCcc
Confidence 899999999999999987543 4899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 464 HKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 464 a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+......
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~~~~~ 238 (327)
T 3lzb_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----EISSILEKGERL 238 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCC
T ss_pred eeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCC
Confidence 987644321 12233445778999999999999999999999999999999 99999654321 122233333333
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 584 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~ 584 (589)
..+...+..+.+++..||+.||++||++.|+++.|+.+.....
T Consensus 239 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 281 (327)
T 3lzb_A 239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQ 281 (327)
T ss_dssp CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence 3445566789999999999999999999999999998876543
No 85
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=349.94 Aligned_cols=249 Identities=18% Similarity=0.254 Sum_probs=197.1
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||+||+|... +|+.||||++..... ......+..|+..+.++ +||||++++++|.+ .+..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~--~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE--GGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe--CCEEEE
Confidence 57889999999999999999986 799999999865432 23334566666666655 89999999999954 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+ +++|.+++..... .++|..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 135 v~e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHSQG-----LVHLDVKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp EEECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred EEecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----EecCCCCHHHEEECCCCCEEEccceeee
Confidence 99999 7799999877643 4999999999999999999999988 9999999999999999999999999988
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
...... ......+|++|+|||++.+ .++.++|||||||++|||++|..|+........ +...........
T Consensus 206 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------~~~~~~~~~~~~ 275 (311)
T 3p1a_A 206 ELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ-------LRQGYLPPEFTA 275 (311)
T ss_dssp ECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH-------HTTTCCCHHHHT
T ss_pred ecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH-------HhccCCCccccc
Confidence 765432 2233457899999998876 799999999999999999999777655432211 111111101111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..+..+.+++..|++.||++|||++|++++-+.
T Consensus 276 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (311)
T 3p1a_A 276 GLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308 (311)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHhCccc
Confidence 235678999999999999999999999987654
No 86
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.5e-43 Score=381.33 Aligned_cols=261 Identities=25% Similarity=0.431 Sum_probs=215.0
Q ss_pred HHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 304 VESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 304 l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
++...++|...+.||+|+||.||+|.+.++..||||+++.... ..++|.+|++++++++||||+++++++.+ +..
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~ 336 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI 336 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee---ccc
Confidence 3344567888899999999999999998888999999986542 34679999999999999999999999843 568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlkp~NIll~~~~~~kl~DFG~ 409 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERMN-----YVHRDLRAANILVGENLVCKVADFGL 409 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred eEeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCCCHhhEEEcCCCcEEEccccc
Confidence 999999999999999976432 24899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
++..............++..|+|||.+.+..++.++|||||||+||||+| |+.||....... ....+....+..
T Consensus 410 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-----~~~~i~~~~~~~ 484 (535)
T 2h8h_A 410 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQVERGYRMP 484 (535)
T ss_dssp TTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-----HHHHHHTTCCCC
T ss_pred ceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCC
Confidence 98765432222223445678999999999999999999999999999999 899986543211 111222223333
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+..++..+.+++..||+.||++|||++++++.|+.+..
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 445567789999999999999999999999999997654
No 87
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3e-42 Score=351.13 Aligned_cols=269 Identities=22% Similarity=0.374 Sum_probs=216.5
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeee
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFC 375 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 375 (589)
+++....++|...+.||+|+||.||+|... +++.||||++...........|.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 445556788999999999999999999864 36889999998665555567899999999999999999999998
Q ss_pred ecCCCCeEEEEEEeCCCCChHHHhhhhcC------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCee
Q 007788 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEG------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVL 449 (589)
Q Consensus 376 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nil 449 (589)
. ..+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||+
T Consensus 98 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dikp~NIl 170 (322)
T 1p4o_A 98 S--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-----FVHRDLAARNCM 170 (322)
T ss_dssp C--SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-----CBCSCCSGGGEE
T ss_pred c--cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCccceEE
Confidence 4 34678999999999999999976421 1234789999999999999999999988 999999999999
Q ss_pred ecCCCceEEccccccccccCCceee-eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHh
Q 007788 450 IDQQFNPLIADCGLHKLLADDIVFS-VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAE 527 (589)
Q Consensus 450 l~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~ 527 (589)
++.++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~- 249 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV- 249 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH-
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH-
Confidence 9999999999999998665433221 122345678999999999899999999999999999999 7888865432111
Q ss_pred hhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 528 SATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+... .....+...+..+.+++..||+.||++|||+.|++++|+.....
T Consensus 250 ---~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 250 ---LRFVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp ---HHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred ---HHHHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1111111 11223345567799999999999999999999999999986543
No 88
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-42 Score=343.92 Aligned_cols=257 Identities=24% Similarity=0.381 Sum_probs=210.5
Q ss_pred ccCcccc-ccccCCCccEEEEEec---CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSEVN-LLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
++|...+ .||+|+||.||+|... ++..||||+++..........+.+|++++++++||||+++++++. .+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ---AEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE---SSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec---CCCcE
Confidence 4455555 8999999999999864 678899999987655556678999999999999999999999983 24689
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 86 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~kl~Dfg~~ 157 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEKN-----FVHRDLAARNVLLVNRHYAKISDFGLS 157 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHCC-----EeeCCCchheEEEcCCCCEEECcccce
Confidence 9999999999999997543 34899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceee--eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 465 KLLADDIVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 465 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
.......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~i~~~~~~ 232 (287)
T 1u59_A 158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRM 232 (287)
T ss_dssp EECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----HHHHHHTTCCC
T ss_pred eeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHhcCCcC
Confidence 8765432211 222345788999999988889999999999999999999 999996543211 11222222223
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
..+...+..+.+++..||+.||++||++.+++++|+.+-.
T Consensus 233 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 233 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 3445567789999999999999999999999999997643
No 89
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2e-42 Score=352.56 Aligned_cols=271 Identities=23% Similarity=0.355 Sum_probs=201.0
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEecCC----cEEEEEEeccCC-CchHHHHHHHHHHHHhccCCCCccceeeeee
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDG----TLVAIRSINVTS-CKSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~l~~~~-~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 376 (589)
+++....++|...+.||+|+||.||+|..... ..||||++.... .....+.|.+|++++++++||||+++++++.
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence 34445567899999999999999999997643 279999997653 2345678999999999999999999999986
Q ss_pred cCCCC----eEEEEEEeCCCCChHHHhhhhcC--CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee
Q 007788 377 SRGRG----ECFLIYDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 450 (589)
Q Consensus 377 ~~~~~----~~~lv~Ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill 450 (589)
..... ..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+||++
T Consensus 96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-----ivH~Dikp~NIli 170 (323)
T 3qup_A 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-----FIHRDLAARNCML 170 (323)
T ss_dssp CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEE
T ss_pred ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-----cccCCCCcceEEE
Confidence 54221 23899999999999999976542 2235899999999999999999999988 9999999999999
Q ss_pred cCCCceEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhh
Q 007788 451 DQQFNPLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAES 528 (589)
Q Consensus 451 ~~~~~~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~ 528 (589)
++++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 171 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-- 248 (323)
T 3qup_A 171 AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-- 248 (323)
T ss_dssp CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--
T ss_pred cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--
Confidence 9999999999999987644322 12223445678999999999999999999999999999999 8999865432211
Q ss_pred hhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 529 ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+. .......+...+..+.+++..||+.||++|||+.++++.|+.+...
T Consensus 249 --~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 249 --YNYLI-GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp --HHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --HHHHh-cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111 1222233445567899999999999999999999999999876543
No 90
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=350.40 Aligned_cols=267 Identities=24% Similarity=0.416 Sum_probs=214.6
Q ss_pred hccCccccccccCCCccEEEEEe-----cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-----RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
.++|+..+.||+|+||.||+|.+ .+++.||||++.... ......|.+|++++++++||||+++++++.......
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35678889999999999999984 368999999997654 455678999999999999999999999986655557
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.++||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTKR-----YIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEEEETTEEEECCCT
T ss_pred eEEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCC-----EeccCCCcceEEEcCCCcEEEecCc
Confidence 8999999999999999986532 4899999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCceee--eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH-----------hhh
Q 007788 463 LHKLLADDIVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA-----------ESA 529 (589)
Q Consensus 463 la~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~-----------~~~ 529 (589)
++.......... .....++..|+|||.+.+..++.++||||||+++|||+||..|+........ ...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 998775443221 1223456679999999988899999999999999999999998864321110 001
Q ss_pred hHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+.+.+........+...+..+.+++..||+.||++|||+.|+++.|+.+...+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 122233333233344556778999999999999999999999999999887643
No 91
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=346.32 Aligned_cols=256 Identities=23% Similarity=0.391 Sum_probs=199.0
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 388 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~E 388 (589)
++|+..+.||+|+||.||+|... ++.||||++... .....|.+|++++++++||||+++++++. +..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL----NPVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT----TTTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc----CCcEEEEE
Confidence 46778899999999999999985 788999998643 34568999999999999999999999884 34789999
Q ss_pred eCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc-eEEccccccccc
Q 007788 389 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN-PLIADCGLHKLL 467 (589)
Q Consensus 389 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~-~kl~DfGla~~~ 467 (589)
|+++|+|.+++..... ...+++..++.++.|+++||+|||+.+ ...|+||||||+||+++.++. +||+|||++...
T Consensus 80 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~--~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~ 156 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQ--PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156 (307)
T ss_dssp CCTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCS--SSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred cCCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCC--CCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence 9999999999976532 224789999999999999999999831 112999999999999998886 799999999765
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (589)
... .....++..|+|||.+.+..++.++||||||+++|||+||+.||........ ..................
T Consensus 157 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 229 (307)
T 2eva_A 157 QTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWAVHNGTRPPLIKNL 229 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHHHHTTCCCCCBTTC
T ss_pred ccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHHHhcCCCCCccccc
Confidence 432 1234578899999999999999999999999999999999999964321110 000111111122233345
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
+..+.+++.+||+.||++|||+++++++|+.+.+.
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999987654
No 92
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=378.64 Aligned_cols=250 Identities=25% Similarity=0.402 Sum_probs=204.6
Q ss_pred ccccCCCccEEEEEec---CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEEeCCC
Q 007788 316 LLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAPK 392 (589)
Q Consensus 316 ~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~Ey~~~ 392 (589)
.||+|+||.||+|.++ ++..||||+++.........+|.+|++++++++|||||+++++|.. +..++||||+++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---CCeEEEEEeCCC
Confidence 7999999999999874 5678999999876555567789999999999999999999999853 458999999999
Q ss_pred CChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccccCCce
Q 007788 393 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 472 (589)
Q Consensus 393 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 472 (589)
|+|.+++.... ..+++..++.|+.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++.......
T Consensus 420 g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~-----iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 420 GPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEKN-----FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp CBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred CcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999997543 34999999999999999999999988 99999999999999999999999999987654321
Q ss_pred e--eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHHHHH
Q 007788 473 F--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAA 549 (589)
Q Consensus 473 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (589)
. ......+++.|+|||++.+..++.++|||||||++|||+| |+.||...... .....+........+..++.
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~ 566 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPP 566 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-----HHHHHHHTTCCCCCCTTCCH
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCH
Confidence 1 1122334578999999999999999999999999999998 99999754321 12222333333344556678
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 550 KLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 550 ~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
.+.+++..||+.||++||++.++++.|+.+-.
T Consensus 567 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 567 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 89999999999999999999999999987643
No 93
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.5e-42 Score=349.14 Aligned_cols=263 Identities=21% Similarity=0.380 Sum_probs=192.9
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++. ..+..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIH--TENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEEC--CTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEE--ECCeEEEE
Confidence 457888899999999999999975 689999999976654444467889999999999999999999984 45789999
Q ss_pred EEeCCCCChHHHhhhhcC--CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 387 YDFAPKGKLSKYLDQEEG--SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
|||++ |+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-----ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-----ILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCChHHeEEcCCCCEEECcCccc
Confidence 99998 699999876532 2235899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc-------
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID------- 536 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~------- 536 (589)
+....... ......+|..|+|||.+.+. .++.++|||||||++|||+||+.||................-.
T Consensus 156 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 156 RAFGIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp EETTSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred eecCCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence 87643221 12234578899999998764 6899999999999999999999999754332111111100000
Q ss_pred ---------cccC------------CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 537 ---------RNLK------------GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 537 ---------~~~~------------~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+... ..........+.+++..|++.||++|||++|++++-+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~ 298 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhh
Confidence 0000 000112345789999999999999999999999886643
No 94
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.7e-42 Score=359.34 Aligned_cols=264 Identities=15% Similarity=0.209 Sum_probs=205.3
Q ss_pred hhccCccccccccCCCccEEEEEecC------CcEEEEEEeccCCCchH----------HHHHHHHHHHHhccCCCCccc
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSE----------EAEFVKGLYLLTSLRHENIIR 370 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~----------~~~~~~e~~~l~~l~H~niv~ 370 (589)
..++|...+.||+|+||.||+|.+.+ ++.||||++........ ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34678889999999999999999864 47899999876531100 123445666778889999999
Q ss_pred eeeeeecCCC--CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCe
Q 007788 371 LRGFCCSRGR--GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKV 448 (589)
Q Consensus 371 l~g~~~~~~~--~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Ni 448 (589)
+++++..... ...++||||+ +++|.+++.... ..+++..++.|+.||+.||+|||+.+ |+||||||+||
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~-----iiHrDlkp~Ni 183 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEHE-----YVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eEEecCCHHHE
Confidence 9999865422 4579999999 999999998653 24999999999999999999999988 99999999999
Q ss_pred eec--CCCceEEccccccccccCCceeee------ecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcch
Q 007788 449 LID--QQFNPLIADCGLHKLLADDIVFSV------LKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTS 520 (589)
Q Consensus 449 ll~--~~~~~kl~DfGla~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~ 520 (589)
|++ .++.+||+|||+++.+........ ....+|+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999 889999999999987654322111 223488899999999999999999999999999999999999975
Q ss_pred hHHHHH--------hhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 521 SMRLAA--------ESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 521 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...... ....+..+++..+.. ...+..+.+++..||+.||++||+++++++.|+.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 264 NLKDPKYVRDSKIRYRENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp GTTCHHHHHHHHHHHHHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhhhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 322111 111223333333221 12346789999999999999999999999999876543
No 95
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-42 Score=350.86 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=206.4
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-----hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-----SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++++++||||+++++++.. .+.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 88 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN--KTD 88 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCE
Confidence 56888899999999999999976 6899999999765322 135679999999999999999999999854 578
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC----ceEE
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF----NPLI 458 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~----~~kl 458 (589)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSLQ-----IAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESCSSSSSCCEEE
T ss_pred EEEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHCC-----eEcCCCCHHHEEEecCCCCCCCEEE
Confidence 999999999999999997543 4899999999999999999999988 99999999999999887 7999
Q ss_pred ccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc
Q 007788 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538 (589)
Q Consensus 459 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 538 (589)
+|||+++....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+....
T Consensus 160 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~~~~~~ 233 (326)
T 2y0a_A 160 IDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANVSAVN 233 (326)
T ss_dssp CCCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHHTC
T ss_pred EECCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHHhcC
Confidence 99999987654321 22345888999999999999999999999999999999999999754322111 1111111
Q ss_pred cCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 539 LKGKFS----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 539 ~~~~~~----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+ ...+..+.+++..|++.||++|||+.|++++-+..
T Consensus 234 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 276 (326)
T 2y0a_A 234 --YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276 (326)
T ss_dssp --CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTS
T ss_pred --CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCcc
Confidence 1111 12346788999999999999999999999886643
No 96
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.1e-42 Score=343.96 Aligned_cols=260 Identities=23% Similarity=0.427 Sum_probs=206.5
Q ss_pred ccCccccccccCCCccEEEEEecC----CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.+|...+.||+|+||.||+|...+ ...||||.+...........|.+|+.++++++||||++++++|... .+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-CCceE
Confidence 467778999999999999998642 3368999998765555667899999999999999999999987543 45788
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 104 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASKK-----FVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp EEEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred EEEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCchheEEECCCCCEEECccccc
Confidence 9999999999999997543 24899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCce---eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCC-CcchhHHHHHhhhhHHHhhccccC
Q 007788 465 KLLADDIV---FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL-VLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 465 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
+....... .......+++.|+|||.+.+..++.++||||||+++|||++|.. ||....... ....+.....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~ 250 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----ITVYLLQGRR 250 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-----HHHHHHTTCC
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-----HHHHHhcCCC
Confidence 87654322 12233456678999999999999999999999999999999555 443322111 1111111112
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+...+..+.+++..||+.||++|||++|+++.|+.+...
T Consensus 251 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 251 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 222334456799999999999999999999999999987654
No 97
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.4e-42 Score=361.51 Aligned_cols=255 Identities=21% Similarity=0.276 Sum_probs=207.2
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|++++++++||||+++++++. +.+..++
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~l 87 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS--EEGHHYL 87 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE--CSSEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE--ECCEEEE
Confidence 467889999999999999999865 789999999976543 234467899999999999999999999985 4578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec---CCCceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ +++.+||+|||
T Consensus 88 v~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~g-----ivHrDlKp~NIll~~~~~~~~vkL~DFG 158 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQMG-----VVHRNLKPENLLLASKLKGAAVKLADFG 158 (444)
T ss_dssp EECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred EEEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEEeccCCCCcEEEccCc
Confidence 999999999999997653 3899999999999999999999998 99999999999998 56789999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC--
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK-- 540 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 540 (589)
++........ ......+|+.|+|||++.+..++.++||||+||++|||++|+.||......... ..+......
T Consensus 159 ~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~----~~i~~~~~~~~ 233 (444)
T 3soa_A 159 LAIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY----QQIKAGAYDFP 233 (444)
T ss_dssp SCBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----HHHHHTCCCCC
T ss_pred eeEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH----HHHHhCCCCCC
Confidence 9987654322 223456889999999999999999999999999999999999999765332211 111111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.......+..+.+++..|++.||++|||+.|++++-+.
T Consensus 234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~ 271 (444)
T 3soa_A 234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271 (444)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTT
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence 11112345678999999999999999999999987654
No 98
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-42 Score=347.01 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=207.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+ .+..++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~~~l 83 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD--AQQIFM 83 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC--SSEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe--CCEEEE
Confidence 57888999999999999999976 799999999975421 1234568899999999999999999999844 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 84 v~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 84 IMDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSKD-----IIYRDLKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp EECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCChheEEEcCCCCEEEeecCcce
Confidence 999999999999998653 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... ..+.
T Consensus 155 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~--~~p~ 224 (318)
T 1fot_A 155 YVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----YEKILNAEL--RFPP 224 (318)
T ss_dssp ECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHCCC--CCCT
T ss_pred ecCCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCC--CCCC
Confidence 76542 2234688999999999999999999999999999999999999976533221 222222222 2334
Q ss_pred HHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHh
Q 007788 546 SEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTV 578 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~ 578 (589)
.....+.+++.+|++.||++|| +++|++++-+.
T Consensus 225 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f 262 (318)
T 1fot_A 225 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262 (318)
T ss_dssp TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccc
Confidence 4556789999999999999999 89999987664
No 99
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.7e-42 Score=354.62 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=208.1
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|..+ +|+.||||++..... ......+.+|++++++++||||+++++++.+ .+..++
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~--~~~~~l 105 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYL 105 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 467899999999999999999976 689999999976543 3344678999999999999999999999854 478899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC---CceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 106 v~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~Dlkp~NIll~~~~~~~~~kl~DfG 176 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSNG-----IVHRNLKPENLLLASKAKGAAVKLADFG 176 (362)
T ss_dssp EECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCchHHEEEecCCCCCCEEEeecC
Confidence 999999999999987543 4899999999999999999999988 9999999999999865 459999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC-
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG- 541 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 541 (589)
++........ .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.......
T Consensus 177 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~~~ 250 (362)
T 2bdw_A 177 LAIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY----AQIKAGAYDYP 250 (362)
T ss_dssp TCBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCC
T ss_pred cceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCCCCC
Confidence 9987654321 22356889999999999999999999999999999999999999764332111 1111111111
Q ss_pred -CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 -KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 -~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
......+..+.+++..||+.||++||++.|++++-+..
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 11123456789999999999999999999999886643
No 100
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.6e-42 Score=346.92 Aligned_cols=268 Identities=20% Similarity=0.353 Sum_probs=211.7
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecC--CCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--GRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~~~ 384 (589)
.++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++... .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46788999999999999999997 478999999987643 44567899999999999999999999998632 235789
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++|+|.+++.........+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-----YAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999875444456999999999999999999999988 999999999999999999999999998
Q ss_pred ccccCCcee--------eeecCCccccccCcccccCCC---CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHH
Q 007788 465 KLLADDIVF--------SVLKTSAAMGYLAPEYVTTGR---FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 465 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 533 (589)
......... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... .....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---DSVAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---SCHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---chhhH
Confidence 765321100 001223578899999987654 6899999999999999999999996532211 11111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcccc
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVMA 584 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~~ 584 (589)
.+............+..+.+++..||+.||.+||++.+++++|+.+.+...
T Consensus 259 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 259 AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 111122222233456689999999999999999999999999998877643
No 101
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-42 Score=355.07 Aligned_cols=267 Identities=21% Similarity=0.366 Sum_probs=214.6
Q ss_pred HHhhccCccccccccCCCccEEEEEecC------CcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeec
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTLRD------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCS 377 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~ 377 (589)
+...++|...+.||+|+||.||+|.... ...||||.+...........+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3345788889999999999999999642 2489999998765555667899999999999 89999999999843
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcC----------CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCC
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEG----------SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEK 447 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~N 447 (589)
.+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 122 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dlkp~N 194 (333)
T 2i1m_A 122 --GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-----CIHRDVAARN 194 (333)
T ss_dssp --SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGG
T ss_pred --CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-----cccCCcccce
Confidence 4678999999999999999976431 1235899999999999999999999988 9999999999
Q ss_pred eeecCCCceEEccccccccccCCcee-eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHH
Q 007788 448 VLIDQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLA 525 (589)
Q Consensus 448 ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~ 525 (589)
|+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 99999999999999999866443221 2223345678999999999899999999999999999999 888886532211
Q ss_pred HhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 526 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.....+........+...+..+.+++..||+.||++|||+.|+++.|+.+...
T Consensus 275 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 275 ----KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp ----HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 11222222222233344466889999999999999999999999999987654
No 102
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=363.16 Aligned_cols=265 Identities=19% Similarity=0.242 Sum_probs=213.0
Q ss_pred cCHHHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeee
Q 007788 299 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFC 375 (589)
Q Consensus 299 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 375 (589)
+.++++....++|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+.+|..++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445666677899999999999999999999986 799999999975321 12224588999999999999999999998
Q ss_pred ecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc
Q 007788 376 CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 376 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
.+ .+..++||||+++|+|.+++..... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.
T Consensus 131 ~~--~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~g-----iiHrDLKp~NILld~~g~ 200 (412)
T 2vd5_A 131 QD--ENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRLG-----YVHRDIKPDNILLDRCGH 200 (412)
T ss_dssp EC--SSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSC
T ss_pred ee--CCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecccCHHHeeecCCCC
Confidence 44 5789999999999999999986532 4899999999999999999999988 999999999999999999
Q ss_pred eEEccccccccccCCceeeeecCCccccccCccccc-------CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhh
Q 007788 456 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-------TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~ 528 (589)
+||+|||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||.........
T Consensus 201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~- 279 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETY- 279 (412)
T ss_dssp EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-
T ss_pred EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHH-
Confidence 999999999877654433333456899999999987 456899999999999999999999999765432221
Q ss_pred hhHHHhhccc--cC-CCCCHHHHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHh
Q 007788 529 ATFENFIDRN--LK-GKFSESEAAKLGKMALVCTHEDPENR---PTMEAVIEELTV 578 (589)
Q Consensus 529 ~~~~~~~~~~--~~-~~~~~~~~~~l~~l~~~C~~~dp~~R---Ps~~evl~~L~~ 578 (589)
..++... .. .......+..+.+++.+|++ +|++| |+++|+++|-+.
T Consensus 280 ---~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff 331 (412)
T 2vd5_A 280 ---GKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF 331 (412)
T ss_dssp ---HHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred ---HHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence 1111111 11 11123346678999999999 99998 699999988664
No 103
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.7e-42 Score=355.35 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=204.2
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..... ......+..|.+++..+ +||||+++++++.. .+..
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~--~~~~ 99 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT--PDRL 99 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe--CCEE
Confidence 467889999999999999999976 689999999975421 22345678899999988 69999999999844 5789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDKG-----IIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCHHHEEECCCCCEEEccccc
Confidence 99999999999999998764 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... ..
T Consensus 171 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~--~~ 243 (353)
T 3txo_A 171 CKEGICNGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDEV--VY 243 (353)
T ss_dssp CBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CC
T ss_pred eeecccCCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCC--CC
Confidence 986433221 22334588999999999988999999999999999999999999976543222 222222222 23
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHHHh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTM------EAVIEELTV 578 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~------~evl~~L~~ 578 (589)
+......+.+++..|++.||++||++ .|++++-+.
T Consensus 244 p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f 284 (353)
T 3txo_A 244 PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284 (353)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGG
T ss_pred CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcc
Confidence 33455678999999999999999998 888877654
No 104
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=359.46 Aligned_cols=266 Identities=21% Similarity=0.286 Sum_probs=215.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++........++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57888899999999999999986 58999999998655444567788999999999999999999998766556789999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee----cCCCceEEccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI----DQQFNPLIADCGL 463 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill----~~~~~~kl~DfGl 463 (589)
||+++|+|.+++..... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG-----IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-----EEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999986542 223899999999999999999999988 9999999999999 7888899999999
Q ss_pred cccccCCceeeeecCCccccccCcccccC--------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTT--------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 535 (589)
++....... .....+|..|+|||++.+ ..++.++|||||||++|||+||+.||............+..++
T Consensus 163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp CEECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred ceEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 987654332 123457889999999865 5678899999999999999999999964321111111111111
Q ss_pred ccc-----------------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 536 DRN-----------------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 536 ~~~-----------------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
... .....+......+.+++..|++.||++||+++|+++.++.+-..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 110 11133477888999999999999999999999999999877554
No 105
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=5.4e-42 Score=343.65 Aligned_cols=258 Identities=21% Similarity=0.365 Sum_probs=200.4
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCc-hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|...+|+.||||++...... .....+.+|++++++++||||+++++++.. .+..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT--KKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--SSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--CCeEEEEE
Confidence 468888999999999999999988999999999765422 223678899999999999999999999854 46899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++ +|.+++....+ .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 80 e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDRR-----VLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp ECCSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred EecCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 99975 99999876432 4899999999999999999999988 999999999999999999999999999865
Q ss_pred cCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh-----------
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI----------- 535 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~----------- 535 (589)
..... ......+|..|+|||.+.+. .++.++|||||||++|||+||+.||................-
T Consensus 151 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 151 GIPVR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp CC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred Ccccc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhh
Confidence 43221 22234578889999998764 589999999999999999999999975432211111111000
Q ss_pred -----ccccCC-------CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 536 -----DRNLKG-------KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 536 -----~~~~~~-------~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
++.... ......+..+.+++.+|++.||++|||++|++++-+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 284 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence 000000 0112245678899999999999999999999987654
No 106
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.1e-42 Score=346.55 Aligned_cols=273 Identities=24% Similarity=0.398 Sum_probs=206.7
Q ss_pred HHHHHHhhccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeee
Q 007788 301 LEEVESATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFC 375 (589)
Q Consensus 301 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~ 375 (589)
++++....++|...+.||+|+||.||+|... .+..||||++..... ......|.+|+.++++++||||+++++++
T Consensus 26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 3445556678899999999999999999864 345899999976543 33456799999999999999999999998
Q ss_pred ecCCCC---eEEEEEEeCCCCChHHHhhhhc--CCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee
Q 007788 376 CSRGRG---ECFLIYDFAPKGKLSKYLDQEE--GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 450 (589)
Q Consensus 376 ~~~~~~---~~~lv~Ey~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill 450 (589)
...... ..++||||+++|+|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+||++
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dikp~NIli 180 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-----FLHRDLAARNCML 180 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-----CCCCCCSGGGEEE
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCcceEEE
Confidence 654322 4599999999999999995432 22345999999999999999999999988 9999999999999
Q ss_pred cCCCceEEccccccccccCCcee-eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhh
Q 007788 451 DQQFNPLIADCGLHKLLADDIVF-SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAES 528 (589)
Q Consensus 451 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~ 528 (589)
+.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-- 258 (313)
T 3brb_A 181 RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-- 258 (313)
T ss_dssp CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--
T ss_pred cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--
Confidence 99999999999999876443211 2223345678999999999999999999999999999999 8888865432111
Q ss_pred hhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 529 ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
...+........+...+..+.+++..||+.||++||++.+++++|+.+.+..
T Consensus 259 ---~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 259 ---YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp ---HHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---HHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111112222334455678999999999999999999999999999886544
No 107
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.9e-42 Score=351.23 Aligned_cols=256 Identities=21% Similarity=0.378 Sum_probs=207.3
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCc--hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.+.|...+.||+|+||.||+|.. .+++.||||++...... .....|.+|++++++++||||+++++++.. .+..+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~ 130 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAW 130 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCeEE
Confidence 35688889999999999999996 47999999999765322 233678999999999999999999999865 46899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||++ |+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 131 lv~e~~~-g~l~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kL~DfG~a 201 (348)
T 1u5q_A 131 LVMEYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHN-----MIHRDVKAGNILLSEPGLVKLGDFGSA 201 (348)
T ss_dssp EEEECCS-EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred EEEecCC-CCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHEEECCCCCEEEeeccCc
Confidence 9999997 688888865432 4899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCccccc---CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
+..... ....+|+.|+|||++. .+.++.++|||||||++|||++|+.||........ ...+.......
T Consensus 202 ~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~----~~~~~~~~~~~ 272 (348)
T 1u5q_A 202 SIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----LYHIAQNESPA 272 (348)
T ss_dssp BSSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSCCCC
T ss_pred eecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcCCCC
Confidence 876542 2345788999999984 56789999999999999999999999965432211 11111111111
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
......+..+.+++..||+.||++|||+++++++.+......
T Consensus 273 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 273 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 222344567889999999999999999999999887665443
No 108
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-41 Score=342.03 Aligned_cols=259 Identities=19% Similarity=0.339 Sum_probs=202.3
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++.+ .+..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--CCEEEEE
Confidence 46888899999999999999976 689999999976543 3344678899999999999999999999854 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++ ++.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~e~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~-----ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSRN-----VLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EECCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 999975 6666665433 24999999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCccccccCcccccCCC-CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc-------
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN------- 538 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~------- 538 (589)
...... ......+|..|+|||.+.+.. ++.++|||||||++|||++|+.|+............+.......
T Consensus 151 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 151 FGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp CCSCCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTT
T ss_pred cCCccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence 643321 223345788899999998766 79999999999999999999988643322111111111100000
Q ss_pred -----------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 539 -----------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 539 -----------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
............+.+++..|++.||++|||++|++++-+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 287 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence 00011123456788999999999999999999999886654
No 109
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=354.52 Aligned_cols=257 Identities=17% Similarity=0.267 Sum_probs=204.8
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|+..+.||+|+||.||+|+.+ +++.||||+++.... ......+..|..++.++ +|||||++++++. +.+..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~--~~~~~ 128 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ--TESRL 128 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE--CSSEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE--ECCEE
Confidence 457888999999999999999976 688999999976532 22234578899999887 8999999999884 45789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|..++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 129 ~lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHERG-----IIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp EEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEeccCCHHHEEECCCCCEEEeecce
Confidence 99999999999999998654 3899999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH-----HhhhhHHHhhccc
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA-----AESATFENFIDRN 538 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~-----~~~~~~~~~~~~~ 538 (589)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+....
T Consensus 200 a~~~~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~ 278 (396)
T 4dc2_A 200 CKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 278 (396)
T ss_dssp CBCCCCTTC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC
T ss_pred eeecccCCC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc
Confidence 986322211 2234568899999999999999999999999999999999999996421110 0011112222222
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHHHh
Q 007788 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTM------EAVIEELTV 578 (589)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~------~evl~~L~~ 578 (589)
. ..+...+..+.+++..|++.||++||++ .|++++-+.
T Consensus 279 ~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 279 I--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp C--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred c--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 2 2344456778999999999999999984 788877554
No 110
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=354.02 Aligned_cols=254 Identities=20% Similarity=0.286 Sum_probs=208.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++.+++||||+++++++.+ .+..++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~--~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFED--KYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC--SSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe--CCEEEEE
Confidence 357889999999999999999976 68999999997654 3345678999999999999999999999854 5789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC--CCceEEcccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ--QFNPLIADCGLH 464 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~--~~~~kl~DfGla 464 (589)
|||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++
T Consensus 127 ~E~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~~~~~vkL~DFG~a 198 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEHS-----IVHLDIKPENIMCETKKASSVKIIDFGLA 198 (387)
T ss_dssp EECCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESSTTCCCEEECCCTTC
T ss_pred EEcCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeecccchHHeEEecCCCCceEEEecccc
Confidence 99999999999997543 24899999999999999999999988 999999999999974 577999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc--cCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN--LKGK 542 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 542 (589)
+........ ....+|+.|+|||++.+..++.++|||||||++|||+||+.||......... ..+.... ....
T Consensus 199 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~----~~i~~~~~~~~~~ 272 (387)
T 1kob_A 199 TKLNPDEIV--KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL----QNVKRCDWEFDED 272 (387)
T ss_dssp EECCTTSCE--EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHHCCCCCCSS
T ss_pred eecCCCcce--eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCcc
Confidence 877654322 2235788999999999999999999999999999999999999764332111 1111111 1111
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.....+..+.+++..||+.||++|||+.|++++-+.
T Consensus 273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (387)
T 1kob_A 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308 (387)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence 223446678999999999999999999999987654
No 111
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=9.9e-42 Score=354.16 Aligned_cols=250 Identities=19% Similarity=0.242 Sum_probs=199.2
Q ss_pred cccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEEeCC
Q 007788 313 EVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFAP 391 (589)
Q Consensus 313 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~Ey~~ 391 (589)
..+.||+|+||.||+|... +|+.||+|++.... ......|.+|++++++++||||+++++++.. .+..++||||++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E~~~ 169 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFES--KNDIVLVMEYVD 169 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEEEEECCT
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE--CCEEEEEEeCCC
Confidence 3578999999999999975 68999999998654 3455689999999999999999999999954 478999999999
Q ss_pred CCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee--cCCCceEEccccccccccC
Q 007788 392 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI--DQQFNPLIADCGLHKLLAD 469 (589)
Q Consensus 392 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill--~~~~~~kl~DfGla~~~~~ 469 (589)
+|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||+++....
T Consensus 170 ~~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 170 GGELFDRIIDESY---NLTELDTILFMKQICEGIRHMHQMY-----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp TCEEHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred CCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 9999999875432 4899999999999999999999988 9999999999999 5678999999999987654
Q ss_pred CceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC--CCCHHH
Q 007788 470 DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--KFSESE 547 (589)
Q Consensus 470 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 547 (589)
... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ +..+....... ......
T Consensus 242 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~ 315 (373)
T 2x4f_A 242 REK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET----LNNILACRWDLEDEEFQDI 315 (373)
T ss_dssp TCB--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCSCSGGGTTS
T ss_pred ccc--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhccCCCChhhhccC
Confidence 332 2234588899999999998999999999999999999999999976543221 12222211111 111234
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+..+.+++..|++.||++|||+.|++++-+..
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 56789999999999999999999999976643
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-41 Score=350.73 Aligned_cols=249 Identities=17% Similarity=0.270 Sum_probs=208.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ......+.+|++++++++||||+++++++.+ .+..++
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~l 118 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD--NSNLYM 118 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc--CCEEEE
Confidence 57888899999999999999976 689999999965421 2234678899999999999999999999854 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 119 v~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSLD-----LIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp EEECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccccCccceEEECCCCCEEEcccccce
Confidence 999999999999998654 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
...... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... ..+.
T Consensus 190 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~--~~p~ 259 (350)
T 1rdq_E 190 RVKGRT----WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSGKV--RFPS 259 (350)
T ss_dssp ECSSCB----CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CCCT
T ss_pred eccCCc----ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH----HHHHHcCCC--CCCC
Confidence 765432 234578899999999999999999999999999999999999976533221 122222221 2334
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPT-----MEAVIEELTV 578 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs-----~~evl~~L~~ 578 (589)
..+..+.+++..|++.||++||+ ++|++++-+.
T Consensus 260 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f 297 (350)
T 1rdq_E 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCc
Confidence 45677899999999999999998 9999987664
No 113
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=351.35 Aligned_cols=256 Identities=18% Similarity=0.328 Sum_probs=204.5
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCC--CCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRH--ENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~~~ 384 (589)
.++|+..+.||+|+||.||+|...+++.||||++..... ......|.+|+.++.+++| |||+++++++.. .+..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~--~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT--DQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee--CCEEE
Confidence 456888999999999999999998999999999976543 3344679999999999986 999999999854 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||| +.+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++ ++.+||+|||++
T Consensus 86 lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~~-----iiHrDikp~NIll~-~~~~kl~DFG~a 154 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIV-DGMLKLIDFGIA 154 (343)
T ss_dssp EEEC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred EEEe-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCcceEEEE-CCcEEEeecccc
Confidence 9999 46889999998653 4899999999999999999999988 99999999999997 578999999999
Q ss_pred ccccCCcee-eeecCCccccccCcccccC-----------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH
Q 007788 465 KLLADDIVF-SVLKTSAAMGYLAPEYVTT-----------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE 532 (589)
Q Consensus 465 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 532 (589)
+........ ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 155 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~ 231 (343)
T 3dbq_A 155 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLH 231 (343)
T ss_dssp CCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHH
T ss_pred cccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HHHHH
Confidence 877543221 1224468899999999865 67899999999999999999999999653221 12233
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 533 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..++.......+......+.+++..||+.||.+|||+.|++++.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 44444444444444456789999999999999999999999987764
No 114
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-41 Score=340.80 Aligned_cols=257 Identities=22% Similarity=0.318 Sum_probs=201.4
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|... ++..||+|++...........+.+|++++++++||||+++++++.. .+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--YHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec--CCeEEEEE
Confidence 46888899999999999999975 6899999999876555556789999999999999999999999853 57899999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEcccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGLH 464 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfGla 464 (589)
||+++|+|.+++.........+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-----VVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-----EEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999999765333345999999999999999999999988 9999999999999 45688999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... ......++..|+|||.+. +.++.++||||||+++|||++|+.||............ ......... ..
T Consensus 175 ~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~--~~~~~~~~~-~~ 248 (285)
T 3is5_A 175 ELFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA--TYKEPNYAV-EC 248 (285)
T ss_dssp CC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHCCCCCCC---
T ss_pred eecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh--ccCCccccc-cc
Confidence 8765432 123445788999999875 57899999999999999999999999754322111110 011111110 01
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
......+.+++..|++.||++|||+.|++++-+.
T Consensus 249 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f 282 (285)
T 3is5_A 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282 (285)
T ss_dssp CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred CcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHh
Confidence 1134578899999999999999999999987553
No 115
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.6e-41 Score=342.34 Aligned_cols=265 Identities=19% Similarity=0.326 Sum_probs=201.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC--CchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|+.++++++||||+++++++.. .+..++
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 109 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNI 109 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCcEEE
Confidence 56888899999999999999974 78999999997533 23445679999999999999999999999865 468999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.........+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-----VMHRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECCC----
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-----eeCCCCcHHHEEEcCCCCEEEEecccee
Confidence 99999999999999764433446899999999999999999999988 9999999999999999999999999988
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ .....+...........
T Consensus 185 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 261 (310)
T 2wqm_A 185 FFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY--SLCKKIEQCDYPPLPSD 261 (310)
T ss_dssp ---------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH--HHHHHHHTTCSCCCCTT
T ss_pred eecCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH--HHHHHhhcccCCCCccc
Confidence 6644321 12234577889999999999999999999999999999999999965421110 01111111111111123
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..+..+.+++..||+.||++|||++++++.|+.+++..
T Consensus 262 ~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 262 HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 44567999999999999999999999999999887654
No 116
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.2e-42 Score=352.69 Aligned_cols=254 Identities=18% Similarity=0.263 Sum_probs=205.8
Q ss_pred HhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCC
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 381 (589)
...++|...+.||+|+||.||+|+.+ +|+.||||+++.... ......+..|..++..+ +||||+++++++.+ .+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--~~ 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--KE 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC--SS
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe--CC
Confidence 34578999999999999999999986 689999999975421 22345678899999877 89999999999844 57
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~g~vkL~DF 162 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSKG-----IVYRDLKLDNILLDKDGHIKIADF 162 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCCChhhEEECCCCCEEEeEC
Confidence 8999999999999999998654 3899999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
|+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+.... .
T Consensus 163 G~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~i~~~~--~ 235 (345)
T 1xjd_A 163 GMCKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF----HSIRMDN--P 235 (345)
T ss_dssp TTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCC--C
T ss_pred hhhhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH----HHHHhCC--C
Confidence 99986432211 223456889999999999999999999999999999999999999765332211 1121111 1
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHH
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTME-AVIEELT 577 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~-evl~~L~ 577 (589)
..+...+..+.+++..|++.||++||++. |++++-+
T Consensus 236 ~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~ 272 (345)
T 1xjd_A 236 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272 (345)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcc
Confidence 23334566789999999999999999998 7776544
No 117
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-41 Score=348.34 Aligned_cols=258 Identities=17% Similarity=0.179 Sum_probs=204.8
Q ss_pred ccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++++ +||||+++++++.. .+..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPC--GKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEE--TTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEec--CCccEEE
Confidence 5688889999999999999996 4789999999875532 23588999999999 99999999999855 4688999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc-----eEEccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN-----PLIADC 461 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Df 461 (589)
|||+ +++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+||
T Consensus 84 ~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~-----iiHrDlkp~Nill~~~~~~~~~~~kl~DF 154 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSKN-----LIYRDVKPENFLIGRPGNKTQQVIHIIDF 154 (330)
T ss_dssp EECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred EEeC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence 9999 999999998653 24999999999999999999999988 999999999999999887 999999
Q ss_pred cccccccCCcee------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh
Q 007788 462 GLHKLLADDIVF------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535 (589)
Q Consensus 462 Gla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 535 (589)
|+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++|+.||........ ...+..+.
T Consensus 155 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~ 233 (330)
T 2izr_A 155 ALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERYQKIG 233 (330)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHHHHHH
T ss_pred ccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHHHHHH
Confidence 999876443211 12345688999999999999999999999999999999999999975321100 00011111
Q ss_pred ccccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 536 DRNLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 536 ~~~~~~~---~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
....... .....+ .+.+++..||+.||.+||+++++++.|+.+...
T Consensus 234 ~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 234 DTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 1000000 001123 899999999999999999999999999876544
No 118
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-41 Score=340.48 Aligned_cols=261 Identities=23% Similarity=0.389 Sum_probs=208.2
Q ss_pred cCccccccccCCCccEEEEEecC----CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLRD----GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.|...+.||+|+||.||+|...+ +..||+|++.........+.|.+|+.++++++||||+++++++... ....++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP-EGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-CCCcEE
Confidence 34556889999999999998642 3379999998765555667899999999999999999999998543 234589
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+.+|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++
T Consensus 101 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQK-----FVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp EECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred EEecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 999999999999997643 34899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCce---eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 466 LLADDIV---FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 466 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
....... .......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... .....+.......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~----~~~~~~~~~~~~~ 248 (298)
T 3pls_A 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF----DLTHFLAQGRRLP 248 (298)
T ss_dssp TTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG----GHHHHHHTTCCCC
T ss_pred cccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH----HHHHHhhcCCCCC
Confidence 6644321 11223446778999999999999999999999999999999776664332211 1122222222223
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+...+..+.+++..||+.||++|||++++++.|+.+....
T Consensus 249 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 249 QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 34445678999999999999999999999999999876543
No 119
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.1e-42 Score=344.45 Aligned_cols=254 Identities=19% Similarity=0.392 Sum_probs=202.5
Q ss_pred hccCccccccccCCCccEEEEEecC-C-------cEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRD-G-------TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG 379 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 379 (589)
.++|...+.||+|+||.||+|.... + ..||+|++.... ....+.|.+|++++++++||||+++++++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVC-- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECC--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe--
Confidence 3578888999999999999998652 3 579999997654 3455789999999999999999999999954
Q ss_pred CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc----
Q 007788 380 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---- 455 (589)
Q Consensus 380 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---- 455 (589)
.+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~ 155 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEENT-----LIHGNVCAKNILLIREEDRKTG 155 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEEEECCBGGGT
T ss_pred CCCCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhCC-----eECCCcCcceEEEecCCccccc
Confidence 4678999999999999999986542 3899999999999999999999988 999999999999998887
Q ss_pred ----eEEccccccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh
Q 007788 456 ----PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT 530 (589)
Q Consensus 456 ----~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~ 530 (589)
+||+|||++....... ...++..|+|||.+.+ ..++.++||||||+++|||++|..|+............
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~ 230 (289)
T 4fvq_A 156 NPPFIKLSDPGISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF 230 (289)
T ss_dssp BCCEEEECCCCSCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred ccceeeeccCcccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH
Confidence 9999999987654322 2346778999999987 67999999999999999999976665443221111111
Q ss_pred HHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 531 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
... ....+...+..+.+++..||+.||++|||++|++++|+.+-...
T Consensus 231 ----~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 231 ----YED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ----HHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ----hhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111 11112223456889999999999999999999999999876543
No 120
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.8e-41 Score=346.28 Aligned_cols=253 Identities=20% Similarity=0.329 Sum_probs=198.4
Q ss_pred hccCccccccccCCCccEEEEEe----cCCcEEEEEEeccCCC---chHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL----RDGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~l~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.++++++||||+++++++.. .
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT--G 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--S
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--C
Confidence 35788899999999999999997 4789999999976532 2234567889999999999999999999854 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~~-----ivH~Dlkp~Nill~~~~~~kl~D 164 (327)
T 3a62_A 94 GKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQKG-----IIYRDLKPENIMLNHQGHVKLTD 164 (327)
T ss_dssp SCEEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCTTTEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EEcccCCHHHeEECCCCcEEEEe
Confidence 78999999999999999998654 3889999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
||+++....... ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||........ ...+.....
T Consensus 165 fg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~- 238 (327)
T 3a62_A 165 FGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT----IDKILKCKL- 238 (327)
T ss_dssp CSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTCC-
T ss_pred CCcccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCC-
Confidence 999876433221 12334578899999999999999999999999999999999999976533221 122222211
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTV 578 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~ 578 (589)
..+......+.+++..||+.||++|| ++.|++++-+.
T Consensus 239 -~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f 280 (327)
T 3a62_A 239 -NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280 (327)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred -CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence 23344566789999999999999999 88899987664
No 121
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-41 Score=337.51 Aligned_cols=254 Identities=22% Similarity=0.378 Sum_probs=205.9
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
+.++|...+.||+|+||.||+|... ++..||||++..... ......+.+|+.++++++||||+++++++.. .+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 84 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD--ATRV 84 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec--CCEE
Confidence 3467888999999999999999876 578999999865321 1224578899999999999999999999854 4789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~-----i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSKR-----VIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp EEEECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTT-----CEECCCCGGGEEECTTSCEEECSCCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EecccCChHhEEEcCCCCEEEEeccc
Confidence 99999999999999998654 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
+....... .....++..|+|||.+.+..++.++||||||+++|||++|+.||......... ..+.. .....
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~--~~~~~ 226 (279)
T 3fdn_A 156 SVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY----KRISR--VEFTF 226 (279)
T ss_dssp ESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHH--TCCCC
T ss_pred cccCCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH----HHHHh--CCCCC
Confidence 86654332 22345788899999999999999999999999999999999999754322111 11111 11223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
+......+.+++..|++.||++|||++|++++-+...
T Consensus 227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 3345567889999999999999999999999987544
No 122
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.5e-43 Score=353.72 Aligned_cols=260 Identities=21% Similarity=0.323 Sum_probs=190.9
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhc--cCCCCccceeeeeecCCCC--eEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS--LRHENIIRLRGFCCSRGRG--ECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~~~--~~~ 384 (589)
++|...+.||+|+||.||+|+.. |+.||||++... ....+..|.+++.. ++||||+++++++...... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57888999999999999999875 889999998643 34567788888877 7999999999998654322 689
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhc--------CCCCCCCCeEecCCCCCCeeecCCCce
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH--------SSEVNKPAIVHRNLSVEKVLIDQQFNP 456 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~~~ivH~dlk~~Nill~~~~~~ 456 (589)
+||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~-----ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-----IAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC------CCCSCCCGGGC-CCTTCCC
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC-----EeeCcCCHHHeEECCCCCE
Confidence 999999999999999654 3788889999999999999999 666 9999999999999999999
Q ss_pred EEccccccccccCCceee---eecCCccccccCcccccCC------CCCCcchhhhHHHHHHHHHhC----------CCC
Q 007788 457 LIADCGLHKLLADDIVFS---VLKTSAAMGYLAPEYVTTG------RFTERSDIFAFGVIILQILTG----------SLV 517 (589)
Q Consensus 457 kl~DfGla~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~s~Gvvl~elltg----------~~p 517 (589)
||+|||+++......... .....+|+.|+|||.+.+. .++.++|||||||++|||+|| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 999999997665433211 1223578899999998876 344689999999999999999 666
Q ss_pred cchhHHHHHh-hhhHHHhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 518 LTSSMRLAAE-SATFENFIDRNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 518 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
|......... ......+.........+ ......+.+++..||+.||++|||+.|+++.|+.+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 6433211111 11112222333333333 266778999999999999999999999999999887654
No 123
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.1e-41 Score=347.84 Aligned_cols=261 Identities=23% Similarity=0.418 Sum_probs=207.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCcE--EEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTL--VAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 384 (589)
++|...+.||+|+||.||+|... ++.. ||||.+...........+.+|++++.++ +||||+++++++.. .+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE--TTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee--CCceE
Confidence 56888899999999999999975 5654 4999987654445556799999999999 89999999999854 47899
Q ss_pred EEEEeCCCCChHHHhhhhc------------CCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC
Q 007788 385 LIYDFAPKGKLSKYLDQEE------------GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~ 452 (589)
+||||+++|+|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-----FIHRDLAARNILVGE 177 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCccceEEEcC
Confidence 9999999999999997653 22345999999999999999999999988 999999999999999
Q ss_pred CCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhH
Q 007788 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATF 531 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 531 (589)
++.+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 178 ~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~----- 250 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----- 250 (327)
T ss_dssp GGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----
T ss_pred CCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH-----
Confidence 9999999999987443211 1222345678999999988889999999999999999998 9999965432211
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
...+........+...+..+.+++.+||+.||++|||++|++++|+.+....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 251 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 1112222222334455678999999999999999999999999999876543
No 124
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.3e-41 Score=347.66 Aligned_cols=256 Identities=16% Similarity=0.271 Sum_probs=205.7
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 384 (589)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|..++.++ +||||+++++++.. .+..+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~--~~~~~ 86 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLF 86 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe--CCEEE
Confidence 56888899999999999999986 689999999976532 23446688999999988 89999999999844 57899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 87 lv~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~~g~~kL~DFG~a 157 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHERG-----IIYRDLKLDNVLLDSEGHIKLTDYGMC 157 (345)
T ss_dssp EEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCHHHEEECCCCCEEEEecccc
Confidence 9999999999999998653 3899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHH-----HHhhhhHHHhhcccc
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL-----AAESATFENFIDRNL 539 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 539 (589)
+....... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...... .........+.....
T Consensus 158 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~ 236 (345)
T 3a8x_A 158 KEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236 (345)
T ss_dssp BCSCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC
T ss_pred ccccCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC
Confidence 86432211 223446889999999999999999999999999999999999999642110 000111122222221
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCH------HHHHHHHHh
Q 007788 540 KGKFSESEAAKLGKMALVCTHEDPENRPTM------EAVIEELTV 578 (589)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~------~evl~~L~~ 578 (589)
..+...+..+.+++..|++.||++||++ .|++++-+.
T Consensus 237 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 237 --RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred --CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 2344456778999999999999999985 788877554
No 125
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-41 Score=339.39 Aligned_cols=252 Identities=23% Similarity=0.433 Sum_probs=207.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeec---------
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS--------- 377 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------- 377 (589)
.++|+..+.||+|+||.||+|... +++.||||++.... ..+.+|++++.+++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 357888999999999999999986 79999999997543 246789999999999999999998743
Q ss_pred -----CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC
Q 007788 378 -----RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452 (589)
Q Consensus 378 -----~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~ 452 (589)
......++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSKK-----LINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eeeccCCHHHEEEcC
Confidence 113457999999999999999976532 34899999999999999999999988 999999999999999
Q ss_pred CCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH
Q 007788 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE 532 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 532 (589)
++.+||+|||++........ .....+++.|+|||.+.+..++.++||||||+++|||++|..|+...... ..
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~------~~ 229 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF------FT 229 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH------HH
T ss_pred CCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH------HH
Confidence 99999999999887654321 22345788999999999999999999999999999999999988643221 11
Q ss_pred HhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 533 NFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
......+ +...+..+.+++..||+.||++||++.|++++|+.+....
T Consensus 230 ~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 230 DLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred Hhhcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 1112222 2233456889999999999999999999999999887654
No 126
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-41 Score=346.53 Aligned_cols=264 Identities=19% Similarity=0.370 Sum_probs=208.9
Q ss_pred hccCccccccccCCCccEEEEEec------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
.++|...+.||+|+||.||+|.+. ++..||||++..........+|.+|+.++++++||||+++++++.. .+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--SL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--CC
Confidence 467888999999999999999842 5778999999765555566789999999999999999999999854 46
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCC---CCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGS---SNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFN 455 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~ 455 (589)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++. +..
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-----i~H~dlkp~NIli~~~~~~~~ 181 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-----FIHRDIAARNCLLTCPGPGRV 181 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEESCSSTTCC
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-----eecCcCCHhHEEEecCCCcce
Confidence 789999999999999999875422 235899999999999999999999988 999999999999984 456
Q ss_pred eEEccccccccccCCce-eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHH
Q 007788 456 PLIADCGLHKLLADDIV-FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 533 (589)
+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... ...
T Consensus 182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~ 256 (327)
T 2yfx_A 182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----VLE 256 (327)
T ss_dssp EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHH
T ss_pred EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH-----HHH
Confidence 99999999876543221 12223446778999999998899999999999999999998 888986543211 111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
.+........+...+..+.+++..||+.||++||++.+++++|+.+.+..
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 257 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 12222222334445678999999999999999999999999999877653
No 127
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.4e-41 Score=342.13 Aligned_cols=260 Identities=15% Similarity=0.169 Sum_probs=206.1
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|++.+.++ +|+|++++++++.. ....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~--~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQE--GLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEE--TTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCC--CceeEE
Confidence 35688889999999999999996 5799999999875432 23578899999999 79999999998844 478899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc-----eEEcc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN-----PLIAD 460 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~-----~kl~D 460 (589)
||||+ +++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|
T Consensus 84 v~e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~NIl~~~~~~~~~~~~kl~D 154 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEKS-----LVYRDIKPDNFLIGRPNSKNANMIYVVD 154 (298)
T ss_dssp EEECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCCGGGEEECCSSSTTTTCEEECC
T ss_pred EEEec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEeccCCCCCCCeEEEEE
Confidence 99999 9999999986532 4899999999999999999999988 999999999999987776 99999
Q ss_pred ccccccccCCcee------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHh
Q 007788 461 CGLHKLLADDIVF------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENF 534 (589)
Q Consensus 461 fGla~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 534 (589)
||+++........ ......+|..|+|||.+.+..++.++||||||+++|||++|+.||........ ......+
T Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~ 233 (298)
T 1csn_A 155 FGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERI 233 (298)
T ss_dssp CTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHH
T ss_pred CccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHH
Confidence 9999876543211 12344578899999999999999999999999999999999999975321000 0000111
Q ss_pred hccccCC---CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 535 IDRNLKG---KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 535 ~~~~~~~---~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
....... ......+..+.+++..||+.||++||+++++++.|+.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 234 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000000 00112356799999999999999999999999999987654
No 128
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-41 Score=341.87 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=207.3
Q ss_pred HhhccCcccc-ccccCCCccEEEEEec---CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 306 SATQCFSEVN-LLGKGNFSSVYKGTLR---DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 306 ~~~~~f~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
...++|...+ .||+|+||.||+|.+. +++.||||++..... ....++|.+|++++++++||||+++++++. .
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---~ 89 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE---A 89 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE---S
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC---C
Confidence 3446677777 9999999999999653 478899999976543 333578999999999999999999999983 3
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 90 ESWMLVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEESN-----FVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEEETTEEEECC
T ss_pred CCcEEEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEcCCCCcceEEEeCCCcEEEcc
Confidence 56899999999999999997643 3899999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCceee--eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhcc
Q 007788 461 CGLHKLLADDIVFS--VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 461 fGla~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
||++.......... .....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+..
T Consensus 161 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~ 235 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEK 235 (291)
T ss_dssp CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHT
T ss_pred CCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHc
Confidence 99998765433221 222345678999999988889999999999999999999 999997543221 1122222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
......+...+..+.+++..||+.||++||++.++++.|+.+-.
T Consensus 236 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 236 GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 22233344566789999999999999999999999999987643
No 129
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.1e-41 Score=353.97 Aligned_cols=255 Identities=19% Similarity=0.331 Sum_probs=203.8
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccC--CCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLR--HENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~~~l 385 (589)
.+|...+.||+|+||.||+|...+++.||||++..... ......|.+|+.++.+++ ||||+++++++.. .+..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~--~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT--DQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec--CCEEEE
Confidence 46888999999999999999988899999999976543 344578999999999996 5999999999854 467999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||| +.+++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++
T Consensus 134 v~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~-----ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp EEE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTTT-----CCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred EEe-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 999 56889999998653 4889999999999999999999988 99999999999996 5899999999998
Q ss_pred cccCCcee-eeecCCccccccCcccccC-----------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHH
Q 007788 466 LLADDIVF-SVLKTSAAMGYLAPEYVTT-----------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 466 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 533 (589)
........ ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+..
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~~ 279 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISKLHA 279 (390)
T ss_dssp CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH---HHHHHH
T ss_pred cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH---HHHHHH
Confidence 77543221 1234568899999999865 46899999999999999999999999653221 122334
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 534 FIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 534 ~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+++.......+......+.+++..||+.||++|||+.|++++.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~ 325 (390)
T 2zmd_A 280 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325 (390)
T ss_dssp HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence 4444433333333456789999999999999999999999887654
No 130
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.2e-41 Score=341.60 Aligned_cols=260 Identities=17% Similarity=0.254 Sum_probs=200.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|+.++.+++||||+++++++.. .+..+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--~~~~~ 110 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--DGQLY 110 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee--CCeEE
Confidence 467888999999999999999976 789999999976532 2234678999999999999999999999855 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 111 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAAG-----ATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred EEEEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCc-----CCcCCCChHHEEEcCCCCEEEecCccC
Confidence 9999999999999998653 4899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC--CC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK--GK 542 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 542 (589)
...............++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+..... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~ 256 (309)
T 2h34_A 182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM-----GAHINQAIPRPST 256 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-----HHHHHSCCCCGGG
T ss_pred ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH-----HHHhccCCCCccc
Confidence 87655433233345578889999999999999999999999999999999999976543211 111111110 01
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHhhhccc
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRP-TMEAVIEELTVAAPVM 583 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RP-s~~evl~~L~~~~~~~ 583 (589)
.....+..+.+++.+||+.||++|| +++++++.|+.+....
T Consensus 257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 2233456789999999999999999 9999999999765543
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-41 Score=349.18 Aligned_cols=266 Identities=16% Similarity=0.223 Sum_probs=204.8
Q ss_pred HHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC----CchHHHHHHHHHHHHhccCCCCccceeeeeecC
Q 007788 304 VESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS----CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR 378 (589)
Q Consensus 304 l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~----~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 378 (589)
+....++|...+.||+|+||.||+|... ++..||+|++.... .......+.+|++++++++||||+++++++.+
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~- 99 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED- 99 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-
Confidence 3445678999999999999999999975 68899999986532 23445789999999999999999999999954
Q ss_pred CCCeEEEEEEeCCCCChHHHhhhhcCC------------------------------------CCCCCHHHHHHHHHHHH
Q 007788 379 GRGECFLIYDFAPKGKLSKYLDQEEGS------------------------------------SNVLDWSTRVSIIIGIA 422 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia 422 (589)
.+..++||||+++|+|.+++...... ...+++..++.|+.|++
T Consensus 100 -~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 100 -EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp -SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 57899999999999999998521100 11235677889999999
Q ss_pred HHhHHhcCCCCCCCCeEecCCCCCCeeecCCC--ceEEccccccccccC---CceeeeecCCccccccCcccccC--CCC
Q 007788 423 KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF--NPLIADCGLHKLLAD---DIVFSVLKTSAAMGYLAPEYVTT--GRF 495 (589)
Q Consensus 423 ~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~--~~kl~DfGla~~~~~---~~~~~~~~~~~~~~y~aPE~~~~--~~~ 495 (589)
.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.... ..........+|+.|+|||.+.+ ..+
T Consensus 179 ~~l~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 179 SALHYLHNQG-----ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHHTT-----EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHHCC-----ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCC
Confidence 9999999988 99999999999998776 899999999986533 11222334568889999999875 678
Q ss_pred CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 007788 496 TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF--SESEAAKLGKMALVCTHEDPENRPTMEAVI 573 (589)
Q Consensus 496 ~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~C~~~dp~~RPs~~evl 573 (589)
+.++||||||+++|||++|+.||........ ...+......... .......+.+++..|++.||++||++.|++
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVNDADT----ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCChHHH----HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999999999975433211 1222222221111 122456789999999999999999999999
Q ss_pred HHHHhhh
Q 007788 574 EELTVAA 580 (589)
Q Consensus 574 ~~L~~~~ 580 (589)
++-+...
T Consensus 330 ~hp~~~~ 336 (345)
T 3hko_A 330 QHPWISQ 336 (345)
T ss_dssp HSHHHHT
T ss_pred cChhhcc
Confidence 9876543
No 132
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.7e-42 Score=350.35 Aligned_cols=251 Identities=21% Similarity=0.319 Sum_probs=204.5
Q ss_pred ccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.+++.++||||+++++++.. .+..++
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~l 86 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT--PTDIVM 86 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 5788889999999999999997 4789999999864321 1123568899999999999999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+ +|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.
T Consensus 87 v~E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~g-----ivH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRHK-----IVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp EECCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHT-----CCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred EEECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCchhhEEEcCCCCEEEEEeccce
Confidence 99999 789999987654 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... .....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||......... ..+ .. .....+
T Consensus 157 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i-~~-~~~~~p 228 (336)
T 3h4j_B 157 IMTDGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----KKV-NS-CVYVMP 228 (336)
T ss_dssp TTTTSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----CCC-CS-SCCCCC
T ss_pred eccCCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----HHH-Hc-CCCCCc
Confidence 7654332 223457889999999988776 78999999999999999999999754221100 000 00 011223
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+..+.+++.+|++.||.+|||++|++++-+..
T Consensus 229 ~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 263 (336)
T 3h4j_B 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263 (336)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhc
Confidence 34556789999999999999999999999988754
No 133
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=349.69 Aligned_cols=254 Identities=21% Similarity=0.306 Sum_probs=192.8
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..++|...+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++.+++||||+++++++.. .+..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFET--PTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEec--CCeEEE
Confidence 3467888999999999999999986 58899999997543 34568899999999999999999999954 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 126 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dikp~NIll~~~~~~~~~kl~Dfg 196 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHENG-----IVHRDLKPENLLYATPAPDAPLKIADFG 196 (349)
T ss_dssp EECCCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred EEEeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEecCCCcccEEEecCCCCCCEEEccCc
Confidence 999999999999997543 4899999999999999999999988 999999999999975 8899999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC--
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK-- 540 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 540 (589)
+++....... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+......
T Consensus 197 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 197 LSKIVEHQVL--MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRILNCEYYFI 271 (349)
T ss_dssp ------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---HHHHHHTTCCCCC
T ss_pred cccccCcccc--cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---HHHHHHhCCCccC
Confidence 9987654321 2234578899999999999999999999999999999999999965432111 11222221111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.......+..+.+++.+|++.||++|||+.|++++-+..
T Consensus 272 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 310 (349)
T 2w4o_A 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310 (349)
T ss_dssp TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence 111234566789999999999999999999999886643
No 134
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=350.18 Aligned_cols=265 Identities=16% Similarity=0.185 Sum_probs=200.2
Q ss_pred ccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCCch----------HHHHHHHHHHHHhccCCCCccceeee
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKS----------EEAEFVKGLYLLTSLRHENIIRLRGF 374 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~----------~~~~~~~e~~~l~~l~H~niv~l~g~ 374 (589)
++|...+.||+|+||.||+|... ++..||||++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57888899999999999999985 57889999987653211 11346778889999999999999999
Q ss_pred eecC--CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC
Q 007788 375 CCSR--GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452 (589)
Q Consensus 375 ~~~~--~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~ 452 (589)
+... +....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHENE-----YVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEES
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeCCCcCHHHEEEcc
Confidence 8652 246789999999 999999998654 4999999999999999999999988 999999999999998
Q ss_pred CC--ceEEccccccccccCCceee------eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHH
Q 007788 453 QF--NPLIADCGLHKLLADDIVFS------VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524 (589)
Q Consensus 453 ~~--~~kl~DfGla~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~ 524 (589)
++ .+||+|||+++.+....... .....++..|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 99999999998764332111 12345788999999999999999999999999999999999999643211
Q ss_pred HHhhhhHHHhhccccCC-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 525 AAESATFENFIDRNLKG-----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 525 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
................. ......+..+.+++..||+.||++||+++++++.|+......
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 267 PVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred cHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 11111111111100000 000133457999999999999999999999999999876443
No 135
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=350.84 Aligned_cols=253 Identities=18% Similarity=0.312 Sum_probs=203.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++|||||++++++.. .+..++
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~--~~~~~l 92 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD--EEDMFM 92 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCEEEE
Confidence 56888899999999999999976 688999999865321 2334678899999999999999999999854 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 93 v~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQR-----IIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp EECCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCcHHHeEECCCCCEEEeccceee
Confidence 999999999999997643 4899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccC---CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......+.. ....
T Consensus 164 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~~~~--~~~~ 238 (384)
T 4fr4_A 164 MLPRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFET--TVVT 238 (384)
T ss_dssp ECCTTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHHHHH--CCCC
T ss_pred eccCCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHHHhh--cccC
Confidence 765432 2234568899999999874 4589999999999999999999999964321110 011111111 1122
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHH
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPT-MEAVIEELT 577 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs-~~evl~~L~ 577 (589)
.+...+..+.+++..||+.||++||+ ++++.++-+
T Consensus 239 ~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~ 274 (384)
T 4fr4_A 239 YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPY 274 (384)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGG
T ss_pred CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChh
Confidence 34445678999999999999999998 787776544
No 136
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4e-41 Score=339.78 Aligned_cols=255 Identities=20% Similarity=0.380 Sum_probs=211.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
+.|...+.||+|+||.||+|... +++.||||++...........+.+|+.++++++||||+++++++.. .+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 99 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWIIM 99 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEEEE
Confidence 56888899999999999999865 6899999999876555566789999999999999999999999865 46789999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++++|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 100 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 169 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEK-----KIHRDIKAANVLLSEHGEVKLADFGVAGQL 169 (303)
T ss_dssp ECCTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EeCCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCChheEEECCCCCEEEeecccceec
Confidence 999999999998642 4899999999999999999999988 999999999999999999999999999876
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (589)
..... ......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ..+............
T Consensus 170 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~ 243 (303)
T 3a7i_A 170 TDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL-----FLIPKNNPPTLEGNY 243 (303)
T ss_dssp BTTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HHHHHSCCCCCCSSC
T ss_pred Ccccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH-----HHhhcCCCCCCcccc
Confidence 54322 223345788899999999999999999999999999999999999754322111 111111122223344
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
+..+.+++..||+.||++|||+.|++++.+....
T Consensus 244 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 5678999999999999999999999998776543
No 137
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.2e-41 Score=348.41 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=206.8
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|...+.||+|+||.||+|+.+ +++.||||+++.... ......+..|..++..+ +||||+++++++. +.+..
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~--~~~~~ 96 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--TMDRL 96 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE--CSSEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE--cCCEE
Confidence 467888999999999999999986 488999999975421 23345688899999988 7999999999884 35789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~g~vkL~DFG~ 167 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSKG-----IIYRDLKLDNVMLDSEGHIKIADFGM 167 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEeccCCHHHEEEcCCCcEEEEeCCc
Confidence 99999999999999998654 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+...... ...+..... ..
T Consensus 168 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~--~~ 240 (353)
T 2i0e_A 168 CKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHNV--AY 240 (353)
T ss_dssp CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CC
T ss_pred ccccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhCCC--CC
Confidence 986432211 22344688999999999999999999999999999999999999976533221 222222222 23
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCC-----HHHHHHHHHh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPT-----MEAVIEELTV 578 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs-----~~evl~~L~~ 578 (589)
+...+..+.+++..|++.||++||+ ++|++++-+.
T Consensus 241 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f 280 (353)
T 2i0e_A 241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280 (353)
T ss_dssp CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence 4455678999999999999999995 6888877543
No 138
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6e-41 Score=344.38 Aligned_cols=264 Identities=20% Similarity=0.319 Sum_probs=208.1
Q ss_pred HHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhc--cCCCCccceeeeeecCCC--
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTS--LRHENIIRLRGFCCSRGR-- 380 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~~-- 380 (589)
....++|...+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 34457899999999999999999998 4899999998643 34567888888887 789999999999865432
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhc--------CCCCCCCCeEecCCCCCCeeecC
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH--------SSEVNKPAIVHRNLSVEKVLIDQ 452 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~~~ivH~dlk~~Nill~~ 452 (589)
...++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-----ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-----IAHRDLKSKNILVKK 182 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-----EECSCCSGGGEEECT
T ss_pred ceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-----eeeCCCCHHHEEECC
Confidence 2789999999999999999753 3899999999999999999999 555 999999999999999
Q ss_pred CCceEEccccccccccCCcee---eeecCCccccccCcccccCCC------CCCcchhhhHHHHHHHHHhC---------
Q 007788 453 QFNPLIADCGLHKLLADDIVF---SVLKTSAAMGYLAPEYVTTGR------FTERSDIFAFGVIILQILTG--------- 514 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~s~Gvvl~elltg--------- 514 (589)
++.+||+|||++......... ......++..|+|||.+.+.. ++.++||||||+++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~ 262 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence 999999999999766543321 123345788999999987753 33689999999999999999
Q ss_pred -CCCcchhHHHHHhhhhH-HHhhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 515 -SLVLTSSMRLAAESATF-ENFIDRNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 515 -~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..||............+ ..+.........+ ......+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 263 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 67775432111001111 1122222222222 366788999999999999999999999999999887653
No 139
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.4e-41 Score=334.88 Aligned_cols=256 Identities=22% Similarity=0.299 Sum_probs=208.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE--ESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc--CCEEEE
Confidence 467888999999999999999976 689999999976542 3344678899999999999999999999843 577899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc---eEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---PLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG 462 (589)
||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||
T Consensus 83 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSNG-----IVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 999999999999987654 3899999999999999999999988 999999999999987655 9999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc--C
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL--K 540 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~ 540 (589)
++........ .....++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .+..... .
T Consensus 154 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~ 227 (284)
T 3kk8_A 154 LAIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA----QIKAGAYDYP 227 (284)
T ss_dssp TCEECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----HHHHTCCCCC
T ss_pred eeEEcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH----HHHhccccCC
Confidence 9977654332 223467889999999999999999999999999999999999997643322111 1111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.......+..+.+++..|++.||++|||+.|++++-+...
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence 1111234567899999999999999999999999876544
No 140
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.5e-42 Score=346.16 Aligned_cols=256 Identities=18% Similarity=0.273 Sum_probs=197.1
Q ss_pred ccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCC--eE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG--EC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--~~ 383 (589)
++|+..+.||+|+||.||+|.. .+++.||||++..... ......|.+|++++.+++||||+++++++...... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788889999999999999997 4789999999976542 23346789999999999999999999988654322 35
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG-----IIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred EEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 99999999999999998654 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 464 HKLLADDIV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 464 a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
++....... .......+++.|+|||.+.+..++.++||||||+++|||+||+.||........... ........
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~----~~~~~~~~ 238 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ----HVREDPIP 238 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHCCCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HhcCCCCC
Confidence 987654321 122234578899999999999999999999999999999999999976433221111 11111000
Q ss_pred --CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 542 --KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 542 --~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
......+..+.+++.+||+.||++||+..+++++-.
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 276 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHH
Confidence 001123567899999999999999998777765543
No 141
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=339.80 Aligned_cols=263 Identities=21% Similarity=0.344 Sum_probs=201.1
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCC----chHHHHHHHHHHHHhcc---CCCCccceeeeeecCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC----KSEEAEFVKGLYLLTSL---RHENIIRLRGFCCSRG 379 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~----~~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~~ 379 (589)
.++|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.+++++ +||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 57899999999999999999996 4789999999974331 11123566777766666 5999999999986543
Q ss_pred CC---eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCce
Q 007788 380 RG---ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNP 456 (589)
Q Consensus 380 ~~---~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~ 456 (589)
.+ ..++||||+. |+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHANC-----IVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCTTTEEECTTSCE
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEcCCCCE
Confidence 22 5789999997 599999976543 24899999999999999999999998 9999999999999999999
Q ss_pred EEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc
Q 007788 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536 (589)
Q Consensus 457 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 536 (589)
||+|||+++...... ......+|+.|+|||.+.+..++.++|||||||++|||++|+.||................-.
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 237 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGL 237 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999999998765432 223345788999999999999999999999999999999999999764432221111111000
Q ss_pred c--------------ccC--CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 537 R--------------NLK--GKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 537 ~--------------~~~--~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
+ ... ... .+.....+.+++.+|++.||++|||+.|++++-+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~ 302 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccC
Confidence 0 000 000 0123567889999999999999999999998866543
No 142
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-41 Score=363.02 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=199.4
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC--CchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|+..+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++.. .+..+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~~ 224 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLC 224 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE--TTEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee--CCEEE
Confidence 467889999999999999999975 68999999997542 23344578899999999999999999999954 46899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcC-CCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+
T Consensus 225 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~g-----iiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 225 FVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEKN-----VVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp EEECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHTC-----CCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred EEEeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcCC-----EEECCCCHHHEEECCCCCEEEccCCC
Confidence 9999999999999997654 38999999999999999999997 77 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
++....... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... ..
T Consensus 296 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~--~~ 368 (446)
T 4ejn_A 296 CKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEEI--RF 368 (446)
T ss_dssp CCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCC--CC
T ss_pred ceeccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHHhCCC--CC
Confidence 986433221 22345688999999999999999999999999999999999999976433211 111222211 23
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTVA 579 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~~ 579 (589)
+...+..+.+++..||+.||++|| +++|++++-+..
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~ 409 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence 334556789999999999999999 999999876653
No 143
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.5e-41 Score=352.60 Aligned_cols=262 Identities=16% Similarity=0.305 Sum_probs=203.3
Q ss_pred hccCccccccccC--CCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKG--NFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|+..+.||+| +||.||+|+.. +|+.||||++..... ......+.+|++++++++|||||++++++.. .+..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE--CCEE
Confidence 3578889999999 99999999986 799999999976543 2334678889999999999999999999964 4789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~-----ivHrDlkp~NIll~~~~~~kl~dfg~ 174 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHMG-----YVHRSVKASHILISVDGKVYLSGLRS 174 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEcCCCCEEEccccc
Confidence 999999999999999986532 24899999999999999999999988 99999999999999999999999998
Q ss_pred cccccCCcee------eeecCCccccccCcccccC--CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh----H
Q 007788 464 HKLLADDIVF------SVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT----F 531 (589)
Q Consensus 464 a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~----~ 531 (589)
+......... ......+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+.......... .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 254 (389)
T 3gni_B 175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV 254 (389)
T ss_dssp CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----
T ss_pred ceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 8654322111 1112357788999999987 57899999999999999999999999653211110000 0
Q ss_pred HHhhccc------------------------------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 007788 532 ENFIDRN------------------------------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575 (589)
Q Consensus 532 ~~~~~~~------------------------------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~ 575 (589)
....+.. ............+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000 0001123345678999999999999999999999988
Q ss_pred HHh
Q 007788 576 LTV 578 (589)
Q Consensus 576 L~~ 578 (589)
-+.
T Consensus 335 p~f 337 (389)
T 3gni_B 335 SFF 337 (389)
T ss_dssp GGG
T ss_pred HHH
Confidence 543
No 144
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-41 Score=338.16 Aligned_cols=254 Identities=22% Similarity=0.419 Sum_probs=202.1
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
.++|+..+.||+|+||.||+|... |+.||||++.... ..+.|.+|++++++++||||+++++++... .+..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CCceEEEE
Confidence 357888899999999999999885 8899999997543 456799999999999999999999987543 34689999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 95 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGNN-----FVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp CCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred ecCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhCC-----ccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 99999999999976532 23789999999999999999999988 999999999999999999999999998765
Q ss_pred cCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSES 546 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (589)
.... ....++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+........+..
T Consensus 168 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~ 238 (278)
T 1byg_A 168 SSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDG 238 (278)
T ss_dssp ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTT
T ss_pred cccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCccc
Confidence 4321 12345778999999998899999999999999999998 99998654221 11111222222334445
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.+..+.+++..||+.||++||++.|+++.|+.+...
T Consensus 239 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 239 CPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 567899999999999999999999999999988654
No 145
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.4e-41 Score=335.30 Aligned_cols=259 Identities=19% Similarity=0.304 Sum_probs=208.6
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|... +++.||||++...........+.+|+.++++++||||+++++++.+ .+..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE--GNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc--CCEEEEE
Confidence 357888999999999999999976 7899999999765545556789999999999999999999999854 4788999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGIG-----ITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp EECCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhCC-----eeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 99999999999986542 4899999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCcee-eeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 467 LADDIVF-SVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 467 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... ......++..|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....+..........
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDWKEKKTYLNPW 231 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH---HHHHHHTTCTTSTTG
T ss_pred cCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHhhhcccccCch
Confidence 6432211 1233457888999999987765 7799999999999999999999965432111 111111111111112
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+..+.+++..|++.||++|||++|++++.+...
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (276)
T 2yex_A 232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (276)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred hhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence 334567889999999999999999999998866543
No 146
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.3e-41 Score=351.82 Aligned_cols=258 Identities=21% Similarity=0.349 Sum_probs=194.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|+..+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++.++. ||||+++++++...+....+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 468999999999999999999975 789999999865432 344567889999999997 99999999999766556799
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 88 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSGG-----LLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCC-----EEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 9999997 6999998753 3899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCc--------------------eeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHH
Q 007788 465 KLLADDI--------------------VFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMR 523 (589)
Q Consensus 465 ~~~~~~~--------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~ 523 (589)
+...... ........+|..|+|||++.+ ..++.++|||||||++|||++|+.||.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8653210 111223468889999999886 6789999999999999999999999975432
Q ss_pred HHHhhhhHHHhhc-----------------------------cccCCCC-------------CHHHHHHHHHHHHHhccc
Q 007788 524 LAAESATFENFID-----------------------------RNLKGKF-------------SESEAAKLGKMALVCTHE 561 (589)
Q Consensus 524 ~~~~~~~~~~~~~-----------------------------~~~~~~~-------------~~~~~~~l~~l~~~C~~~ 561 (589)
......... .+. ....... .......+.+++.+|++.
T Consensus 237 ~~~~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 237 MNQLERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 221111110 000 0000000 002245788999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 007788 562 DPENRPTMEAVIEELT 577 (589)
Q Consensus 562 dp~~RPs~~evl~~L~ 577 (589)
||++|||++|++++-+
T Consensus 316 dP~~R~t~~e~l~Hp~ 331 (388)
T 3oz6_A 316 NPNKRISANDALKHPF 331 (388)
T ss_dssp SGGGSCCHHHHTTSTT
T ss_pred CcccCCCHHHHhCCHH
Confidence 9999999999999855
No 147
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.4e-41 Score=350.08 Aligned_cols=259 Identities=18% Similarity=0.314 Sum_probs=208.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... +++.||+|++...........+.+|+.++++++||||+++++++.. .+..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--CCEEEEE
Confidence 367888999999999999999986 7899999999876555556789999999999999999999999865 4789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
|||+++|+|.+++.... .+++..+..++.+++.||+|||+. + |+||||||+||+++.++.+||+|||++.
T Consensus 110 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 180 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKHK-----IMHRDVKPSNILVNSRGEIKLCDFGVSG 180 (360)
T ss_dssp ECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred EECCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhCC-----EEcCCccHHHEEECCCCCEEEEECCCCc
Confidence 99999999999998754 389999999999999999999985 6 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhh-----------------
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES----------------- 528 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~----------------- 528 (589)
...... .....++..|+|||++.+..++.++||||||+++|||+||+.||..........
T Consensus 181 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3eqc_A 181 QLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP 257 (360)
T ss_dssp HHHHHC-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------
T ss_pred cccccc---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCc
Confidence 553321 123457889999999999999999999999999999999999996432111000
Q ss_pred ---------------------hhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 529 ---------------------ATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 529 ---------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...................+..+.+++..||+.||++|||++|++++-+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 330 (360)
T 3eqc_A 258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330 (360)
T ss_dssp ----------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred ccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence 0000111111111111223567899999999999999999999999877543
No 148
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.6e-41 Score=334.46 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=185.2
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++.+ .+..++
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 90 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS--KDEIIM 90 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSCEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCeEEE
Confidence 46888899999999999999864 789999999976532 2334678899999999999999999999854 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+ +++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.
T Consensus 91 v~e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~-----i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp EEECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred Eehhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CeeccCChHhEEECCCCCEEEeecccce
Confidence 99999 778888886543 4899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... .....++..|+|||.+.+..+ +.++||||||+++|||++|+.||......... ..+.... ...+
T Consensus 161 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~--~~~~ 232 (275)
T 2eue_A 161 IMTDGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF----KNISNGV--YTLP 232 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTC--CCCC
T ss_pred eccCccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCC--CCCC
Confidence 6654322 223457888999999988765 78999999999999999999999764322111 1111111 1233
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+..+.+++.+|++.||++|||++|++++-+.-.
T Consensus 233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence 345567899999999999999999999999877543
No 149
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.1e-41 Score=373.08 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=203.3
Q ss_pred cccccCCCccEEEEEec---CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEEeC
Q 007788 315 NLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYDFA 390 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~Ey~ 390 (589)
+.||+|+||.||+|.+. .++.||||+++.... ....++|.+|++++.+++|||||+++++|.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCEEEEEEcc
Confidence 47999999999999753 468899999976532 3345789999999999999999999999843 4588999999
Q ss_pred CCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccccCC
Q 007788 391 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADD 470 (589)
Q Consensus 391 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~ 470 (589)
++|+|.+++.... .+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 452 ~~g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~~-----iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 452 ELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEESN-----FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522 (635)
T ss_dssp TTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred CCCCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHCC-----EeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence 9999999997543 4899999999999999999999988 999999999999999999999999999876543
Q ss_pred ce--eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccCCCCCHHH
Q 007788 471 IV--FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLKGKFSESE 547 (589)
Q Consensus 471 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (589)
.. .......+++.|+|||++.+..++.++|||||||++|||+| |+.||...... .....+........+..+
T Consensus 523 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~ 597 (635)
T 4fl3_A 523 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCPAGC 597 (635)
T ss_dssp ------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCTTC
T ss_pred ccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCCC
Confidence 21 12223345678999999999999999999999999999999 99999764332 122223333333445566
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
+..+.+++..||+.||++||++.++++.|+.+-.
T Consensus 598 ~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 598 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 7889999999999999999999999999987643
No 150
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-41 Score=345.04 Aligned_cols=265 Identities=25% Similarity=0.439 Sum_probs=197.3
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHH--HhccCCCCccceeeeee---cCCCCe
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYL--LTSLRHENIIRLRGFCC---SRGRGE 382 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~--l~~l~H~niv~l~g~~~---~~~~~~ 382 (589)
.++|...+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++. ......
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788889999999999999987 68999999997432 3344444444 55689999999998553 223346
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC----CCCCeEecCCCCCCeeecCCCceEE
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV----NKPAIVHRNLSVEKVLIDQQFNPLI 458 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~~~ivH~dlk~~Nill~~~~~~kl 458 (589)
.++||||+++|+|.+++.... .+|..++.++.||+.||+|||+... ..+.|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 789999999999999997543 6899999999999999999998800 0112999999999999999999999
Q ss_pred ccccccccccCCce-------eeeecCCccccccCcccccC-------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHH
Q 007788 459 ADCGLHKLLADDIV-------FSVLKTSAAMGYLAPEYVTT-------GRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524 (589)
Q Consensus 459 ~DfGla~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~ 524 (589)
+|||+++.+..... .......+|..|+|||++.+ ..++.++|||||||++|||+||+.|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221 11223458889999999987 45677999999999999999998877532211
Q ss_pred HHh-------------hhhHHHhh-ccccCCCC------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 525 AAE-------------SATFENFI-DRNLKGKF------SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 525 ~~~-------------~~~~~~~~-~~~~~~~~------~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
... .......+ ........ ....+..+.+++..||+.||++|||++|+++.|+.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 000 00011111 11111111 234677899999999999999999999999999987643
No 151
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.6e-41 Score=353.25 Aligned_cols=257 Identities=17% Similarity=0.225 Sum_probs=195.3
Q ss_pred ccCccc-cccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhc-cCCCCccceeeeeec--CCCCeE
Q 007788 309 QCFSEV-NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTS-LRHENIIRLRGFCCS--RGRGEC 383 (589)
Q Consensus 309 ~~f~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~--~~~~~~ 383 (589)
++|... +.||+|+||.||+|... +|+.||||++... ..+.+|++++.+ .+||||+++++++.. .+.+..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 345554 68999999999999976 6899999998632 246678887744 589999999998743 224568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCceEEcc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIAD 460 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 460 (589)
++||||+++|+|.+++..... ..+++..+..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSIN-----IAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCcCcceEEEecCCCCccEEEEe
Confidence 999999999999999976432 34999999999999999999999988 999999999999998 78999999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
||+++...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||...............+......
T Consensus 208 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~ 285 (400)
T 1nxk_A 208 FGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285 (400)
T ss_dssp CTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC
T ss_pred cccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc
Confidence 99998665332 1223457889999999999999999999999999999999999997543221111111111111111
Q ss_pred --CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 541 --GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 541 --~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.......+..+.+++..||+.||++|||+.|++++.+...
T Consensus 286 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 1111334567899999999999999999999999977643
No 152
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.8e-41 Score=364.34 Aligned_cols=261 Identities=17% Similarity=0.269 Sum_probs=210.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|+.+ +|+.||||++..... ......+..|++++++++||||+++++++.. .+..+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~--~~~l~ 261 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET--KTDLC 261 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee--CCEEE
Confidence 467888999999999999999986 699999999975421 1234678899999999999999999998843 57899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++|+|.+++.........+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-----IvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-----IIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-----CcccCCChHHEEEeCCCCEEEeeccee
Confidence 999999999999999865543456999999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...............+.... ...+
T Consensus 337 ~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~--~~~p 413 (543)
T 3c4z_A 337 VELKAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA--VTYP 413 (543)
T ss_dssp EECCTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC--CCCC
T ss_pred eeccCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc--cCCC
Confidence 87654322 12234688999999999999999999999999999999999999976432111111112222221 1234
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHHh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTM-----EAVIEELTV 578 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~-----~evl~~L~~ 578 (589)
...+..+.+++..|++.||++||++ ++++++-+.
T Consensus 414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff 452 (543)
T 3c4z_A 414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452 (543)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGG
T ss_pred cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccc
Confidence 4556788999999999999999965 778766443
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.1e-41 Score=344.07 Aligned_cols=250 Identities=20% Similarity=0.293 Sum_probs=182.4
Q ss_pred ccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEEEEEEeCC
Q 007788 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYDFAP 391 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~Ey~~ 391 (589)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.++.++. ||||+++++++.+ .+..++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~--~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHD--QLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc--CCEEEEEEEccC
Confidence 478999999999999986 6899999999643 3456789999999997 9999999999954 578999999999
Q ss_pred CCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC---ceEEcccccccccc
Q 007788 392 KGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF---NPLIADCGLHKLLA 468 (589)
Q Consensus 392 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~---~~kl~DfGla~~~~ 468 (589)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++...
T Consensus 90 ~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 90 GGELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDVG-----VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp SCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 999999998653 4899999999999999999999988 99999999999998765 89999999998664
Q ss_pred CCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh---hhhHHHhhccccCCCC--
Q 007788 469 DDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE---SATFENFIDRNLKGKF-- 543 (589)
Q Consensus 469 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~-- 543 (589)
.... ......+|..|+|||.+.+..++.++|||||||++|||++|+.||......... ......+.........
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (325)
T 3kn6_A 161 PDNQ-PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA 239 (325)
T ss_dssp C-----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH
T ss_pred CCCC-cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc
Confidence 4322 222345688899999999999999999999999999999999999764321110 1111122211111110
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
....+..+.+++..|++.||++|||++|++++-+..
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~ 275 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGC
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhc
Confidence 123467899999999999999999999999887653
No 154
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=343.00 Aligned_cols=261 Identities=19% Similarity=0.346 Sum_probs=192.8
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeec------CC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCS------RG 379 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~------~~ 379 (589)
..+|...+.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++. ||||+++++++.. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 457888999999999999999975 78999999986553 445567899999999996 9999999998842 23
Q ss_pred CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEc
Q 007788 380 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIA 459 (589)
Q Consensus 380 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~ 459 (589)
....++||||+. |+|.+++..... ...+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQK---PPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTSS---SCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---CCEEEccCCcccEEECCCCCEEEe
Confidence 346899999995 799999876432 235999999999999999999999875 459999999999999999999999
Q ss_pred cccccccccCCceee-----------eecCCccccccCcccc---cCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH
Q 007788 460 DCGLHKLLADDIVFS-----------VLKTSAAMGYLAPEYV---TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLA 525 (589)
Q Consensus 460 DfGla~~~~~~~~~~-----------~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~ 525 (589)
|||+++......... .....+++.|+|||.+ .+..++.++||||||+++|||+||+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 999998765432211 1133477889999998 56678999999999999999999999996543211
Q ss_pred HhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 526 AESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
.................+.+++..||+.||++||++.|++++|+.+...
T Consensus 261 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 --------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp -------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111112222334588999999999999999999999999988754
No 155
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.7e-41 Score=337.60 Aligned_cols=259 Identities=17% Similarity=0.296 Sum_probs=192.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHH-HHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|+..+.||+|+||.||+|... +|+.||||++..........+ +.++...++.++||||+++++++.. .+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~--~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--EGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--cCCEEE
Confidence 467888999999999999999974 789999999976644333333 4445556888899999999999954 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
||||++ |+|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-----VIHRDVKPSNVLINALGQVKMCDFGIS 157 (290)
T ss_dssp EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-----CCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-----eecCCCCHHHEEECCCCCEEEeecCCc
Confidence 999997 599888876433345699999999999999999999987 7 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccc----cCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYV----TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
+....... .....+++.|+|||.+ .+..++.++||||||+++|||+||+.||....... ............
T Consensus 158 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~ 232 (290)
T 3fme_A 158 GYLVDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPSP 232 (290)
T ss_dssp --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCCC
T ss_pred cccccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH---HHHHHHhccCCC
Confidence 87654322 2233578889999996 55678999999999999999999999997532211 111222222222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.......+..+.+++..|++.||++|||+.|++++-+..
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~ 271 (290)
T 3fme_A 233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 271 (290)
T ss_dssp CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence 222234466789999999999999999999999976654
No 156
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-40 Score=332.03 Aligned_cols=251 Identities=18% Similarity=0.275 Sum_probs=205.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFED--NTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCeEEEE
Confidence 457888999999999999999976 57899999997654 2345679999999999999999999999854 5789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGL 463 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfGl 463 (589)
|||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+
T Consensus 85 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~ 155 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKLN-----VAHRDLKPENFLFLTDSPDSPLKLIDFGL 155 (277)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EeccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCCCCHHHEEEecCCCCCcEEEEeccc
Confidence 99999999999997654 3899999999999999999999988 9999999999999 8889999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
+........ .....+++.|+|||.+.+ .++.++||||||+++|||++|+.||......... ..+..... ..
T Consensus 156 ~~~~~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~--~~ 226 (277)
T 3f3z_A 156 AARFKPGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVM----LKIREGTF--TF 226 (277)
T ss_dssp CEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCC--CC
T ss_pred ceeccCccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhCCC--CC
Confidence 987654332 223457889999998865 4899999999999999999999999764332111 11111111 11
Q ss_pred CH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 544 SE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 544 ~~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+. ..+..+.+++..|++.||++|||+.|++++-+..
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~ 266 (277)
T 3f3z_A 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266 (277)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 22 2356789999999999999999999999876643
No 157
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.5e-41 Score=349.42 Aligned_cols=244 Identities=21% Similarity=0.328 Sum_probs=191.7
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHH-HhccCCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYL-LTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
++|+..+.||+|+||.||+|+.+ +++.||||++..... ......+..|..+ ++.++||||+++++++.. .+..+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~--~~~~~ 115 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLY 115 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC--SSEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe--CCEEE
Confidence 57888999999999999999986 588999999976542 2233456677766 577899999999999854 57899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 116 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~g-----ivHrDlkp~NIll~~~g~ikL~DFG~a 186 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSLN-----IVYRDLKPENILLDSQGHIVLTDFGLC 186 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred EEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCHHHEEECCCCCEEEeeCccc
Confidence 9999999999999998654 3889999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...++.... ..+
T Consensus 187 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~--~~~ 259 (373)
T 2r5t_A 187 KENIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM----YDNILNKPL--QLK 259 (373)
T ss_dssp GGGBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH----HHHHHHSCC--CCC
T ss_pred cccccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH----HHHHHhccc--CCC
Confidence 86432211 22344688999999999999999999999999999999999999976543222 222222222 123
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHH
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTME 570 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~ 570 (589)
......+.+++..|++.||++||++.
T Consensus 260 ~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 260 PNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp SSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred CCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 34456789999999999999999974
No 158
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.3e-41 Score=336.38 Aligned_cols=252 Identities=18% Similarity=0.337 Sum_probs=204.6
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|... +++.||||++..... .....++.+|+..+.++ +||||+++++++.+ .+..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--~~~~~ 87 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--DDHML 87 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE--TTEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEE
Confidence 467889999999999999999986 799999999986532 34557788999999999 89999999999854 46899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC------------
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ------------ 452 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~------------ 452 (589)
+||||+++|+|.+++.........+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dikp~NIl~~~~~~~~~~~~~~~ 162 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-----LVHMDIKPSNIFISRTSIPNAASEEGD 162 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEC-------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-----EeecCCCHHHEEEcCCCCCcccccccc
Confidence 999999999999999875433345899999999999999999999988 999999999999984
Q ss_pred -------CCceEEccccccccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHH
Q 007788 453 -------QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRL 524 (589)
Q Consensus 453 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~ 524 (589)
...+||+|||.+....... ...++..|+|||.+.+. .++.++||||||+++|||++|..++......
T Consensus 163 ~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~ 237 (289)
T 1x8b_A 163 EDDWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW 237 (289)
T ss_dssp -------CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH
T ss_pred cccccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH
Confidence 4479999999998765432 23478889999999876 5668999999999999999999876543221
Q ss_pred HHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 525 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+.. ......+...+..+.+++..||+.||++|||+.|++++-+..
T Consensus 238 -------~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 284 (289)
T 1x8b_A 238 -------HEIRQ-GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284 (289)
T ss_dssp -------HHHHT-TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred -------HHHHc-CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence 11111 111223334456799999999999999999999999876643
No 159
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.5e-41 Score=342.42 Aligned_cols=252 Identities=21% Similarity=0.337 Sum_probs=206.6
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCch-----HHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-----EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
.++|...+.||+|+||.||+|... +|+.||||++....... ....+.+|+.++.+++||||+++++++.. .+
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN--RT 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SS
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec--CC
Confidence 356888999999999999999976 68999999997654221 35679999999999999999999999854 47
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC----ceE
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF----NPL 457 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~----~~k 457 (589)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+|
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~-----ivH~dikp~NIl~~~~~~~~~~~k 159 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTKK-----IAHFDLKPENIMLLDKNIPIPHIK 159 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEESCTTSSSCCEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCChHHEEEecCCCCcCCEE
Confidence 8999999999999999997543 4899999999999999999999988 99999999999999888 799
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
|+|||++........ .....+++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+...
T Consensus 160 l~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~i~~~ 233 (321)
T 2a2a_A 160 LIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL----ANITSV 233 (321)
T ss_dssp ECCCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH----HHHHTT
T ss_pred EccCccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhc
Confidence 999999987654321 22345788999999999999999999999999999999999999754322111 111111
Q ss_pred ccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 538 NLKGKFSE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 538 ~~~~~~~~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.. ..+. ..+..+.+++..|++.||++|||+.|++++-+.
T Consensus 234 ~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~ 276 (321)
T 2a2a_A 234 SY--DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (321)
T ss_dssp CC--CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred cc--ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 11 1111 234578999999999999999999999987654
No 160
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=345.12 Aligned_cols=260 Identities=18% Similarity=0.351 Sum_probs=196.6
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~ 387 (589)
++|...+.||+|+||.||+|... +++.||||++...........+.+|++++++++||||+++++++.. .+..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--SSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee--CCEEEEEe
Confidence 46888899999999999999986 7899999999765433323356679999999999999999999854 47789999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
||++ |+|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 80 e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQK-----VLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp ECCS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----EEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred cccc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 9997 599999876542 4899999999999999999999988 999999999999999999999999999865
Q ss_pred cCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh-----------
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI----------- 535 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~----------- 535 (589)
..... ......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||................-
T Consensus 151 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 151 SIPTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhh
Confidence 43221 2223456888999999876 5689999999999999999999999976432211111100000
Q ss_pred ------c---cccCCC----CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 536 ------D---RNLKGK----FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 536 ------~---~~~~~~----~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
. +..... ........+.+++..|++.||++|||++|++++-+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 0 000000 01123457889999999999999999999999877543
No 161
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.6e-41 Score=345.90 Aligned_cols=262 Identities=18% Similarity=0.259 Sum_probs=205.6
Q ss_pred cCHHHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-----CCCcccee
Q 007788 299 LNLEEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-----HENIIRLR 372 (589)
Q Consensus 299 ~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~ 372 (589)
+++.+.....++|...+.||+|+||.||+|+.. +++.||||++... ......+..|++++.++. ||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 344444455688999999999999999999974 7899999999743 344567788999999986 99999999
Q ss_pred eeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC
Q 007788 373 GFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ 452 (589)
Q Consensus 373 g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~ 452 (589)
+++.. .+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 103 ~~~~~--~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 103 GKFMY--YDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKMS-----LTHTDLKPENILLDD 172 (360)
T ss_dssp EEEEE--TTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEESC
T ss_pred ceeeE--CCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCcccEEEcc
Confidence 99855 46899999999 9999999986542 24899999999999999999999988 999999999999975
Q ss_pred -------------------------CCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHH
Q 007788 453 -------------------------QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVI 507 (589)
Q Consensus 453 -------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvv 507 (589)
++.+||+|||+++...... ....+|+.|+|||++.+..++.++|||||||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 7899999999998654422 23457889999999999999999999999999
Q ss_pred HHHHHhCCCCcchhHHHHHhhhhHHHhh--------------------ccc-----cCCCC-C---------------HH
Q 007788 508 ILQILTGSLVLTSSMRLAAESATFENFI--------------------DRN-----LKGKF-S---------------ES 546 (589)
Q Consensus 508 l~elltg~~p~~~~~~~~~~~~~~~~~~--------------------~~~-----~~~~~-~---------------~~ 546 (589)
+|||+||+.||........... +.... +.. ..... . ..
T Consensus 249 l~ell~g~~pf~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 327 (360)
T 3llt_A 249 LAELYTGSLLFRTHEHMEHLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII 327 (360)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHC
T ss_pred HHHHHHCCCCCCCCcHHHHHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccc
Confidence 9999999999965322111000 00000 000 00000 0 00
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 547 EAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 547 ~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
....+.+++..||+.||++|||++|++++-+
T Consensus 328 ~~~~l~~li~~~L~~dP~~Rpta~elL~hp~ 358 (360)
T 3llt_A 328 KHELFCDFLYSILQIDPTLRPSPAELLKHKF 358 (360)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred hHHHHHHHHHHHhcCChhhCCCHHHHhcCcc
Confidence 1256789999999999999999999997644
No 162
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=346.08 Aligned_cols=249 Identities=19% Similarity=0.314 Sum_probs=205.1
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-------hHHHHHHHHHHHHhccCCCCccceeeeeecC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-------SEEAEFVKGLYLLTSLRHENIIRLRGFCCSR 378 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 378 (589)
..++|...+.||+|+||.||+|... +++.||||++...... .....+.+|++++++++||||+++++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 3568999999999999999999964 7899999999765321 123457789999999999999999999843
Q ss_pred CCCeEEEEEEeCCCC-ChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 379 GRGECFLIYDFAPKG-KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
.+..++||||+..| +|.+++.... .+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 101 -~~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 101 -QGFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp -SSEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTSCEE
T ss_pred -CCEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEEeccCHHHEEEcCCCcEE
Confidence 57899999999877 9999997543 3899999999999999999999988 99999999999999999999
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 536 (589)
|+|||+++....... .....+|+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..
T Consensus 171 L~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------~~ 238 (335)
T 3dls_A 171 LIDFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------VE 238 (335)
T ss_dssp ECCCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------TT
T ss_pred EeecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------Hh
Confidence 999999987654432 122457889999999988776 78999999999999999999999653221 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 537 RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 537 ~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
... ..+...+..+.+++..||+.||++|||++|++++-+...
T Consensus 239 ~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 239 AAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp TCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred hcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 111 112223557899999999999999999999999877543
No 163
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.5e-41 Score=357.42 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=206.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++.. .+..++
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~--~~~~~l 93 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST--PSDIFM 93 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEE
Confidence 56788899999999999999976 799999999975421 1234578899999999999999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDLkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 94 VMEYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRHM-----VVHRDLKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp EEECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTTT-----EECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CCcccccHHHEEEecCCCeEEEeccchh
Confidence 999999999999997543 4899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... .....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ...+.+... ..+
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~~~~--~~p 236 (476)
T 2y94_A 165 MMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL----FKKICDGIF--YTP 236 (476)
T ss_dssp ECCTTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH----HHHHHTTCC--CCC
T ss_pred hcccccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH----HHHHhcCCc--CCC
Confidence 7654322 223457889999999988765 6899999999999999999999975432211 122222211 123
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
......+.+++..|++.||++|||++|++++-+..
T Consensus 237 ~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~ 271 (476)
T 2y94_A 237 QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271 (476)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence 33456789999999999999999999999986654
No 164
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.8e-40 Score=352.83 Aligned_cols=258 Identities=17% Similarity=0.279 Sum_probs=198.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCC----CC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 381 (589)
.++|+..+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++.... ..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999865 689999999975432 344567889999999999999999999985432 24
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~~-----iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCChHhEEEeCCCCEEEEEE
Confidence 67999999976 46666642 2889999999999999999999998 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH----------
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF---------- 531 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~---------- 531 (589)
|+++....... .....+|+.|+|||++.+..|+.++|||||||++|||++|+.||.+...........
T Consensus 209 G~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~ 286 (464)
T 3ttj_A 209 GLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286 (464)
T ss_dssp CCC-----CCC--C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred EeeeecCCCcc--cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 99987654321 233467889999999999999999999999999999999999997643221111111
Q ss_pred --------HHhhccc---------------cCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 532 --------ENFIDRN---------------LKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 532 --------~~~~~~~---------------~~~~~---~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+... ..... .......+.+++.+|++.||++|||++|++++-+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~ 360 (464)
T 3ttj_A 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360 (464)
T ss_dssp HTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred HHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhh
Confidence 0111100 00000 012256789999999999999999999999987653
No 165
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-40 Score=332.88 Aligned_cols=255 Identities=23% Similarity=0.367 Sum_probs=201.8
Q ss_pred cCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecC--CCCeEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--GRGECFL 385 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~~~l 385 (589)
.|...+.||+|+||.||+|... ++..||+|++..... ....+.+.+|+.++++++||||+++++++... .....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3566778999999999999875 688999999976542 34457799999999999999999999987542 2456899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-CCCceEEcccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-QQFNPLIADCGLH 464 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfGla 464 (589)
||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ ++|+||||||+||+++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~---~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTRT---PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTSS---SCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcCC---CCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 999999999999998653 3899999999999999999999875 4599999999999998 7899999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
........ ....+++.|+|||.+. +.++.++||||||+++|||++|+.||.......... ..+.........+
T Consensus 180 ~~~~~~~~---~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~ 252 (290)
T 1t4h_A 180 TLKRASFA---KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIY---RRVTSGVKPASFD 252 (290)
T ss_dssp GGCCTTSB---EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHH---HHHTTTCCCGGGG
T ss_pred cccccccc---ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHH---HHHhccCCccccC
Confidence 76554322 2345788999999876 469999999999999999999999996532211111 1111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
......+.+++..||+.||++|||++|++++-+.
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f 286 (290)
T 1t4h_A 253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhhCccc
Confidence 2223568999999999999999999999987654
No 166
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=351.88 Aligned_cols=259 Identities=19% Similarity=0.295 Sum_probs=205.0
Q ss_pred ccCccccccccCCCccEEEEEe----cCCcEEEEEEeccCCC---chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCC
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL----RDGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGR 380 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~l~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 380 (589)
++|...+.||+|+||.||+|+. .+++.||||+++.... ......+.+|++++.++ +||||+++++++.. .
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~ 131 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--E 131 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--T
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--C
Confidence 5788899999999999999997 3789999999875321 12234577899999999 69999999998854 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~D 202 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKLG-----IIYRDIKLENILLDSNGHVVLTD 202 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEESC
T ss_pred ceEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEECCCCcEEEee
Confidence 68899999999999999998654 3899999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCC--CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG--RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 538 (589)
||+++..............+|+.|+|||++.+. .++.++|||||||++|||+||+.||...............+...
T Consensus 203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~- 281 (355)
T 1vzo_A 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS- 281 (355)
T ss_dssp SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-
T ss_pred CCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhcc-
Confidence 999986643322222334588999999999863 47899999999999999999999996432111111111111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhh
Q 007788 539 LKGKFSESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTVAA 580 (589)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~~~ 580 (589)
....+......+.+++.+||+.||++|| +++|++++.+...
T Consensus 282 -~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 282 -EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred -CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 1233445566789999999999999999 9999999877643
No 167
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-41 Score=345.94 Aligned_cols=261 Identities=17% Similarity=0.310 Sum_probs=205.6
Q ss_pred hhccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHH-HhccCCCCccceeeeeecCCCCeEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYL-LTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
..++|+..+.||+|+||.||+|.. .+|+.||||++..........++..|... ++.++||||+++++++.. .+..+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~--~~~~~ 126 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--EGDVW 126 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC--SSCEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe--CCcEE
Confidence 456788889999999999999997 47999999999876545555666666665 778899999999999854 46799
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
+||||+++ +|.+++.........+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||+|||+
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~-----ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 200 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-----VIHRDVKPSNVLINALGQVKMCDFGI 200 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC-----CCCCSCCSTTEEECSTTCEEECCCSH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-----eecCCCCHHHEEECCCCCEEEeeCCC
Confidence 99999975 99999876433344699999999999999999999986 6 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCccccc----CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVT----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 539 (589)
++....... .....++..|+|||++. ...++.++|||||||++|||+||+.||....... ..+...+....
T Consensus 201 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~ 275 (340)
T 3an0_A 201 SGYLVDSVA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPS 275 (340)
T ss_dssp HHHHSCHHH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCC
T ss_pred ceecccccc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH---HHHHHHhcCCC
Confidence 986643221 12245788999999964 3468999999999999999999999997532111 11122222221
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
........+..+.+++..||+.||++||++.|++++-+...
T Consensus 276 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 316 (340)
T 3an0_A 276 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316 (340)
T ss_dssp CCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccc
Confidence 11122334677999999999999999999999998866543
No 168
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.8e-41 Score=364.21 Aligned_cols=260 Identities=20% Similarity=0.313 Sum_probs=211.0
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
..++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++.+++|||||++++++.+ .+..
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~--~~~l 259 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KDAL 259 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee--CCEE
Confidence 3567899999999999999999986 799999999965321 2234568899999999999999999998844 5789
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~g-----IvHrDLKPeNILld~~g~vKL~DFGl 332 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRER-----IVYRDLKPENILLDDHGHIRISDLGL 332 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----EeccCCchheEEEeCCCCeEEEeccc
Confidence 999999999999999976432 24899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .+...+. .....+
T Consensus 333 a~~~~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~-~i~~~i~-~~~~~~ 408 (576)
T 2acx_A 333 AVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVK-EVPEEY 408 (576)
T ss_dssp CEECCTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH-HHHHHHH-HCCCCC
T ss_pred ceecccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH-HHHHHhh-cccccC
Confidence 987754432 233468999999999999899999999999999999999999997642211101 1111111 112223
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRP-----TMEAVIEELTVA 579 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RP-----s~~evl~~L~~~ 579 (589)
+...+..+.+++..|++.||++|| +++|+++|-+..
T Consensus 409 p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~ 449 (576)
T 2acx_A 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449 (576)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence 444567899999999999999999 789999886643
No 169
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.3e-41 Score=370.59 Aligned_cols=261 Identities=21% Similarity=0.378 Sum_probs=210.6
Q ss_pred HhhccCccccccccCCCccEEEEEec----CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLR----DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
...++|...+.||+|+||.||+|.+. .+..||||++...........|.+|+.++++++||||+++++++.+ +
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---~ 463 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---N 463 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---S
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---C
Confidence 34577888999999999999999874 2568999998766545556789999999999999999999999832 4
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g-----ivHrDikp~NILl~~~~~vkL~DF 535 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLESKR-----FVHRDIAARNVLVSSNDCVKLGDF 535 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEEEETTEEEECCC
T ss_pred ceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccchHhEEEeCCCCEEEEec
Confidence 6899999999999999997653 24899999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
|+++..............+++.|+|||.+.+..++.++||||||+++|||++ |..||.+...... ... +.....
T Consensus 536 G~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~----~~~-i~~~~~ 610 (656)
T 2j0j_A 536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV----IGR-IENGER 610 (656)
T ss_dssp CCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----HHH-HHHTCC
T ss_pred CCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH----HHH-HHcCCC
Confidence 9998876544333334456778999999998899999999999999999997 8899875432211 111 111222
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
...+...+..+.+++..||+.||++|||+.|+++.|+.+...
T Consensus 611 ~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 233445567899999999999999999999999999987543
No 170
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.2e-41 Score=335.64 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=199.6
Q ss_pred ccCccccccccCCCccEEEEEec--CCc--EEEEEEeccCC--CchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR--DGT--LVAIRSINVTS--CKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~l~~~~--~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
++|+..+.||+|+||.||+|.+. +++ .||||+++... .....+.|.+|++++.+++||||+++++++.. +.
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 94 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---PP 94 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---SS
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc---CC
Confidence 57888899999999999999864 333 68999987543 23455789999999999999999999999854 34
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESKR-----FIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEEEETTEEEECCCT
T ss_pred ceeeEecccCCCHHHHHHhccC---CcCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCchheEEEcCCCCEEEcccc
Confidence 7899999999999999986542 3899999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCcee--eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhhcccc
Q 007788 463 LHKLLADDIVF--SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFIDRNL 539 (589)
Q Consensus 463 la~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 539 (589)
++......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~~~~~~~~~ 242 (291)
T 1u46_A 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ----ILHKIDKEGE 242 (291)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTSCC
T ss_pred ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH----HHHHHHccCC
Confidence 99876543221 1223346678999999998889999999999999999999 999997543221 1122222222
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
....+...+..+.+++..||+.||++|||+.++++.|+.+.+.
T Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 243 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 2233445567899999999999999999999999999987654
No 171
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=336.59 Aligned_cols=259 Identities=17% Similarity=0.272 Sum_probs=199.5
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||.||+|... +|+.||||++...... .....+.+|++++++++||||+++++++.. .+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR--KRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--CCeEEEE
Confidence 57888999999999999999986 5899999998765432 334678899999999999999999999954 4788999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 151 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKHN-----CIHRDVKPENILITKHSVIKLCDFGFARL 151 (311)
T ss_dssp EECCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHCC-----CcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence 99999999999886543 3899999999999999999999988 99999999999999999999999999987
Q ss_pred ccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH----------Hhh
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE----------NFI 535 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~----------~~~ 535 (589)
...... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.............. ...
T Consensus 152 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (311)
T 4agu_A 152 LTGPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230 (311)
T ss_dssp CC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred ccCccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence 653322 1223457888999999876 5689999999999999999999999975432211110000 000
Q ss_pred c-c------ccC---CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 536 D-R------NLK---GKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 536 ~-~------~~~---~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
. . ... ... .+..+..+.+++..||+.||++|||++|++++-+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 289 (311)
T 4agu_A 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289 (311)
T ss_dssp HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence 0 0 000 000 012355688999999999999999999999886543
No 172
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.4e-40 Score=334.19 Aligned_cols=256 Identities=16% Similarity=0.300 Sum_probs=209.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++.. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 91 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVF 91 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc--CCEEE
Confidence 357888899999999999999986 588999999875432 3345678999999999999999999999854 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRNR-----VIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EEEECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999999987653 3899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
........ ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+.... ...+
T Consensus 163 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~ 235 (294)
T 2rku_A 163 TKVEYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKNE--YSIP 235 (294)
T ss_dssp EECCSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTC--CCCC
T ss_pred eecccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhcc--CCCc
Confidence 87643221 12234578889999999998899999999999999999999999976432211 11111111 1223
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
......+.+++..||+.||++|||++|++++.+....
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 3445678999999999999999999999998776443
No 173
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-40 Score=332.37 Aligned_cols=251 Identities=22% Similarity=0.364 Sum_probs=207.1
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++.. .+..++
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 91 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD--RKRIYL 91 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc--CCEEEE
Confidence 56888899999999999999976 688999999865321 1224678999999999999999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHERK-----VIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCHHHEEEcCCCCEEEecccccc
Confidence 999999999999998654 3899999999999999999999988 9999999999999999999999999987
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
...... .....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+.... ...+.
T Consensus 163 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~--~~~~~ 233 (284)
T 2vgo_A 163 HAPSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----HRRIVNVD--LKFPP 233 (284)
T ss_dssp ECSSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTC--CCCCT
T ss_pred cCcccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----HHHHhccc--cCCCC
Confidence 654322 1234578889999999999999999999999999999999999975432211 11122211 12334
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+..+.+++..|++.||++||+++|++++-+..
T Consensus 234 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~ 267 (284)
T 2vgo_A 234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267 (284)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence 4556789999999999999999999999886654
No 174
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-40 Score=332.95 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=203.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-----hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCe
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-----SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 382 (589)
++|...+.||+|+||.||+|... +++.||||++...... .....+.+|+.++++++||||+++++++.. .+.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~ 82 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN--KTD 82 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC--CCe
Confidence 56888999999999999999986 6899999998765321 135689999999999999999999999854 478
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC----ceEE
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF----NPLI 458 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~----~~kl 458 (589)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSKR-----IAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEESCSSSSSCCEEE
T ss_pred EEEEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCChHHEEEecCCCCCCceEE
Confidence 999999999999999997653 3899999999999999999999988 99999999999999877 8999
Q ss_pred ccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccc
Q 007788 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRN 538 (589)
Q Consensus 459 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 538 (589)
+|||++........ .....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+....
T Consensus 154 ~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~ 227 (283)
T 3bhy_A 154 IDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET----LTNISAVN 227 (283)
T ss_dssp CCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTC
T ss_pred EecccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH----HHHhHhcc
Confidence 99999987654321 2234578889999999999999999999999999999999999975432211 11111111
Q ss_pred cCCCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 539 LKGKFS----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 539 ~~~~~~----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
...+ ...+..+.+++.+|++.||++||++.|++++-+.
T Consensus 228 --~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 269 (283)
T 3bhy_A 228 --YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269 (283)
T ss_dssp --CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHH
T ss_pred --cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHH
Confidence 1111 1234578999999999999999999999987553
No 175
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=334.17 Aligned_cols=255 Identities=21% Similarity=0.367 Sum_probs=186.4
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ......+.+|+.++.+++||||+++++++.. .+..+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 87 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED--SNYVY 87 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC--SSEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc--CCeEE
Confidence 35788889999999999999997 4789999999965321 1223678999999999999999999999854 57899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSHG-----ILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp EEEECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHEEEcCCCCEEEEeecce
Confidence 9999999999999997643 34899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
........ ......+++.|+|||.+.+..++.++||||||+++|||++|+.||....... ......... ...+
T Consensus 160 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~--~~~~ 232 (278)
T 3cok_A 160 TQLKMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN----TLNKVVLAD--YEMP 232 (278)
T ss_dssp EECC-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------CCSSC--CCCC
T ss_pred eeccCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH----HHHHHhhcc--cCCc
Confidence 87643221 1223457888999999999899999999999999999999999996532111 111111111 1123
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...+..+.+++.+|++.||++|||+++++++-+..
T Consensus 233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~ 267 (278)
T 3cok_A 233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMS 267 (278)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC
T ss_pred cccCHHHHHHHHHHcccCHhhCCCHHHHhcCcccc
Confidence 33456789999999999999999999999876644
No 176
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1e-40 Score=335.26 Aligned_cols=263 Identities=14% Similarity=0.201 Sum_probs=204.0
Q ss_pred hhccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+|++++.+++|++++..++++... .+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEE-TTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCC-CCceEE
Confidence 347899999999999999999996 5789999998765432 23578899999999999999888877543 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfG 462 (589)
||||+ +++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||
T Consensus 83 v~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~-----ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSKN-----FIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 99999 9999999975432 4999999999999999999999988 9999999999999 789999999999
Q ss_pred ccccccCCcee------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc
Q 007788 463 LHKLLADDIVF------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536 (589)
Q Consensus 463 la~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 536 (589)
+++........ ......++..|+|||.+.+..++.++|||||||++|||++|+.||........ ......+..
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 232 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISE 232 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh-hhhhhhhhc
Confidence 99876543221 12234578899999999999999999999999999999999999975321100 000111111
Q ss_pred cccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 537 RNLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 537 ~~~~~~---~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
...... .....+..+.+++..||+.||++|||++++++.|+.+.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 233 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 111000 01122467999999999999999999999999999876643
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=346.08 Aligned_cols=260 Identities=15% Similarity=0.192 Sum_probs=203.7
Q ss_pred ccCccccccccCCCccEEEEEecC---------CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccc---------
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRD---------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIR--------- 370 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~--------- 370 (589)
++|...+.||+|+||.||+|.... ++.||||++... ..+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578888999999999999999763 789999998754 25789999999999999998
Q ss_pred ------eeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCC
Q 007788 371 ------LRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLS 444 (589)
Q Consensus 371 ------l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk 444 (589)
+++++.. ..+..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+.+ |+|||||
T Consensus 116 ~~~i~~~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dik 186 (352)
T 2jii_A 116 LLAIPTCMGFGVH-QDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENE-----YVHGNVT 186 (352)
T ss_dssp TCSCCCCCEEEEE-TTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT-----CBCSCCC
T ss_pred ccCccchhhcccc-CCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCC-----ccCCCCC
Confidence 5666644 246889999999 999999998652 124999999999999999999999988 9999999
Q ss_pred CCCeeecCCC--ceEEccccccccccCCceee------eecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCC
Q 007788 445 VEKVLIDQQF--NPLIADCGLHKLLADDIVFS------VLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSL 516 (589)
Q Consensus 445 ~~Nill~~~~--~~kl~DfGla~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~ 516 (589)
|+||+++.++ .+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 89999999998765432111 122357889999999999999999999999999999999999
Q ss_pred CcchhHHHHHhhh-hHHHhhccc--cCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 517 VLTSSMRLAAESA-TFENFIDRN--LKG--KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 517 p~~~~~~~~~~~~-~~~~~~~~~--~~~--~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
||........... ....+.... +.. ......+..+.+++..||+.||++||+++++++.|+.+....
T Consensus 267 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 9976531111111 111111110 000 000123567999999999999999999999999999876553
No 178
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.8e-42 Score=356.43 Aligned_cols=250 Identities=14% Similarity=0.181 Sum_probs=192.9
Q ss_pred hhccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCC--CchHHHHHHHHH---HHHhccCCCCcccee-------e
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTS--CKSEEAEFVKGL---YLLTSLRHENIIRLR-------G 373 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~--~~~~~~~~~~e~---~~l~~l~H~niv~l~-------g 373 (589)
..++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.|.+|+ +.+++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 346788889999999999999996 469999999997532 234557889999 556666899999998 4
Q ss_pred eeecCCC----------C-----eEEEEEEeCCCCChHHHhhhhcCC---CCCCCHHHHHHHHHHHHHHhHHhcCCCCCC
Q 007788 374 FCCSRGR----------G-----ECFLIYDFAPKGKLSKYLDQEEGS---SNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435 (589)
Q Consensus 374 ~~~~~~~----------~-----~~~lv~Ey~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 435 (589)
++..... + ..++||||+ +|+|.+++...... ...++|..++.|+.||+.||+|||+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--- 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--- 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 4432210 1 378999999 68999999864321 123556888999999999999999988
Q ss_pred CCeEecCCCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCC-----------CCCCcchhhhH
Q 007788 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-----------RFTERSDIFAF 504 (589)
Q Consensus 436 ~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~s~ 504 (589)
|+||||||+|||++.++.+||+|||+++.... ......+ +.|+|||++.+. .++.++|||||
T Consensus 227 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSl 299 (377)
T 3byv_A 227 --LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299 (377)
T ss_dssp --EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred --eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHH
Confidence 99999999999999999999999999986443 2223445 889999999887 89999999999
Q ss_pred HHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 505 GVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 505 Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
||++|||+||+.||........ ...+.. . ....+..+.+++..||+.||++|||+.|++++-+
T Consensus 300 G~il~elltg~~Pf~~~~~~~~----~~~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 362 (377)
T 3byv_A 300 GLVIYWIWCADLPITKDAALGG----SEWIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE 362 (377)
T ss_dssp HHHHHHHHHSSCCC------CC----SGGGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred HHHHHHHHHCCCCCcccccccc----hhhhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence 9999999999999965432211 111111 0 1123457889999999999999999999998644
No 179
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.4e-41 Score=341.62 Aligned_cols=260 Identities=20% Similarity=0.333 Sum_probs=195.6
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
..++|...+.||+|+||.||+|... +++.||||++...... .....+.+|++++++++||||+++++++.. .+..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 109 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--NHRLH 109 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE--TTEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec--CCEEE
Confidence 4568999999999999999999865 7899999999765432 234568899999999999999999999854 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-----CCCceEEc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-----QQFNPLIA 459 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-----~~~~~kl~ 459 (589)
+||||++ |+|.+++.... .+++..+..|+.||+.||+|||+.+ |+||||||+|||++ +++.+||+
T Consensus 110 lv~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~~~kl~ 179 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSRR-----CLHRDLKPQNLLLSVSDASETPVLKIG 179 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred EEEecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----EECCCCCHHHEEEecCCCCccceEEEC
Confidence 9999997 59999997653 3899999999999999999999988 99999999999994 55569999
Q ss_pred cccccccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc-
Q 007788 460 DCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR- 537 (589)
Q Consensus 460 DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~- 537 (589)
|||+++....... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||................-.+
T Consensus 180 Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 180 DFGLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258 (329)
T ss_dssp CTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred cCCCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCc
Confidence 9999987643221 22234568889999999875 48999999999999999999999997643322111111110000
Q ss_pred ------------------ccCCCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 538 ------------------NLKGKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 538 ------------------~~~~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...... .......+.+++..|++.||++|||++|++++-+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~ 323 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccC
Confidence 000000 011346788999999999999999999999886654
No 180
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.4e-40 Score=334.38 Aligned_cols=262 Identities=15% Similarity=0.201 Sum_probs=206.7
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|+. .+++.||||++..... ..++.+|+.++.+++|++++..++++... .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEE-TTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCC-CCceEEE
Confidence 46788899999999999999997 5799999999876542 23588999999999999988888777543 4678999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGL 463 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfGl 463 (589)
|||+ +++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 154 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSKN-----FIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154 (296)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence 9999 9999999975432 4999999999999999999999988 9999999999999 5889999999999
Q ss_pred cccccCCcee------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 464 HKLLADDIVF------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 464 a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
++........ ......++..|+|||.+.+..++.++|||||||++|||++|+.||........ ...+..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 233 (296)
T 3uzp_A 155 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEK 233 (296)
T ss_dssp CEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-SSHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-hhhhhhhccc
Confidence 9876543221 12334578899999999999999999999999999999999999975321000 0001111111
Q ss_pred ccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 538 NLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 538 ~~~~~---~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..... .....+..+.+++..||+.||++|||+.++++.|+.+....
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 10000 01123467999999999999999999999999999876543
No 181
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.7e-40 Score=340.27 Aligned_cols=255 Identities=16% Similarity=0.299 Sum_probs=209.1
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||++... +++.||+|++..... ......+.+|+.++++++||||+++++++.+ .+..+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 117 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED--NDFVF 117 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec--CCeEE
Confidence 467888899999999999999976 588999999875432 3445678999999999999999999999954 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 118 lv~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRNR-----VIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp EEECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CEecCCCchhEEEcCCCCEEEeeccCc
Confidence 9999999999999987653 3899999999999999999999988 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
........ ......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ..+..... ..+
T Consensus 189 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~--~~~ 261 (335)
T 2owb_A 189 TKVEYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY----LRIKKNEY--SIP 261 (335)
T ss_dssp EECCSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCC--CCC
T ss_pred eecccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH----HHHhcCCC--CCC
Confidence 87643221 122345788899999999988999999999999999999999999754322111 11111111 123
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
......+.+++.+||+.||++||+++|++++-+...
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 344567889999999999999999999999876543
No 182
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=331.30 Aligned_cols=256 Identities=24% Similarity=0.329 Sum_probs=201.9
Q ss_pred cCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLIYD 388 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv~E 388 (589)
+|....+||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE--NGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--CCcEEEEEE
Confidence 3455568999999999999974 68899999997654 3445679999999999999999999999954 468899999
Q ss_pred eCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC-CCceEEccccccccc
Q 007788 389 FAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-QFNPLIADCGLHKLL 467 (589)
Q Consensus 389 y~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~-~~~~kl~DfGla~~~ 467 (589)
|+++++|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++...
T Consensus 100 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~ 173 (295)
T 2clq_A 100 QVPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDNQ-----IVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173 (295)
T ss_dssp CCSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEEETTTCCEEECCTTTCEES
T ss_pred eCCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhCC-----EEccCCChhhEEEECCCCCEEEeeccccccc
Confidence 9999999999986532 234778999999999999999999988 999999999999998 899999999999876
Q ss_pred cCCceeeeecCCccccccCcccccCCC--CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 468 ADDIVFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 468 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
..... ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||......... .............+.
T Consensus 174 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~~ 249 (295)
T 2clq_A 174 AGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKVGMFKVHPEIPE 249 (295)
T ss_dssp CC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHHHHHCCCCCCCT
T ss_pred CCCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhhccccccccccc
Confidence 53221 122345788999999987654 889999999999999999999999653221111 011111122223344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..+..+.+++..||+.||++||++.|++++-+.
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~ 282 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGG
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 556788999999999999999999999987554
No 183
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.8e-40 Score=335.24 Aligned_cols=253 Identities=23% Similarity=0.394 Sum_probs=204.6
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.. .+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYES--TTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhccc--CCEEEEE
Confidence 357888999999999999999976 78999999998653 2334578899999999999999999999854 5789999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGL 463 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfGl 463 (589)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++ ++++.+||+|||+
T Consensus 85 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dikp~NIl~~~~~~~~~~kl~Dfg~ 155 (304)
T 2jam_A 85 MQLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHENG-----IVHRDLKPENLLYLTPEENSKIMITDFGL 155 (304)
T ss_dssp ECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCSCCGGGCEESSSSTTCCEEBCSCST
T ss_pred EEcCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCHHHEEEecCCCCCCEEEccCCc
Confidence 99999999999997654 3899999999999999999999988 9999999999999 7889999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc--CC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL--KG 541 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 541 (589)
+....... .....++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+..... ..
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~ 228 (304)
T 2jam_A 156 SKMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL----FEKIKEGYYEFES 228 (304)
T ss_dssp TCCCCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHCCCCCCT
T ss_pred ceecCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCc
Confidence 87654321 1123477889999999999999999999999999999999999975433211 111111111 11
Q ss_pred CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 ~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
......+..+.+++..|++.||++||++.|++++.+..
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~ 266 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccc
Confidence 22234457799999999999999999999999886653
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=342.64 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=197.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC----C
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----G 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----~ 381 (589)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++..... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888999999999999999975 799999999965432 3345678999999999999999999999854321 3
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+ +++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAAG-----IIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCcCHHHEEEcCCCCEEEEee
Confidence 569999999 88999999753 3899999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH--------
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-------- 532 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~-------- 532 (589)
|+++..... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+............
T Consensus 173 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~ 248 (367)
T 1cm8_A 173 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248 (367)
T ss_dssp TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred ecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 999876542 223457888999999887 6799999999999999999999999975432211111000
Q ss_pred -----------Hhhcc--ccC----CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 533 -----------NFIDR--NLK----GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 533 -----------~~~~~--~~~----~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..+.. ... ..........+.+++.+|++.||++|||++|++++-+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f 311 (367)
T 1cm8_A 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311 (367)
T ss_dssp HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred HHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHH
Confidence 00000 000 01112335678999999999999999999999998654
No 185
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-40 Score=350.76 Aligned_cols=258 Identities=21% Similarity=0.284 Sum_probs=197.1
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-------chHHHHHHHHHHHHhccCCCCccceeeeeecC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-------KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR 378 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~ 378 (589)
..++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999875 689999999975421 1122358899999999999999999999743
Q ss_pred CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC---Cc
Q 007788 379 GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FN 455 (589)
Q Consensus 379 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~---~~ 455 (589)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.
T Consensus 212 --~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~-----ivHrDlkp~NIll~~~~~~~~ 280 (419)
T 3i6u_A 212 --EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCL 280 (419)
T ss_dssp --SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEESSSSSSCC
T ss_pred --CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCChHhEEEecCCCcce
Confidence 46899999999999999987543 4899999999999999999999988 9999999999999754 45
Q ss_pred eEEccccccccccCCceeeeecCCccccccCcccccC---CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH
Q 007788 456 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT---GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE 532 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 532 (589)
+||+|||+++....... .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ...
T Consensus 281 ~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~----~~~ 354 (419)
T 3i6u_A 281 IKITDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLK 354 (419)
T ss_dssp EEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC----CHH
T ss_pred EEEeecccceecCCCcc--ccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH----HHH
Confidence 99999999987754322 223457889999999864 568889999999999999999999996532110 111
Q ss_pred HhhccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhcc
Q 007788 533 NFIDRNLKGKFS---ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPV 582 (589)
Q Consensus 533 ~~~~~~~~~~~~---~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~ 582 (589)
..+........+ ...+..+.+++.+|++.||++|||++|++++-+...+.
T Consensus 355 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 407 (419)
T 3i6u_A 355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407 (419)
T ss_dssp HHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred HHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence 111111111111 12356789999999999999999999999987765443
No 186
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=341.66 Aligned_cols=262 Identities=22% Similarity=0.300 Sum_probs=199.1
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCch----HHHHHHHHHHHHhccCCCCccceeeeeecCCCC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS----EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG 381 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 381 (589)
..++|...+.||+|+||.||+|... +|+.||||++....... ....+.+|++++++++||||+++++++. ..+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~ 85 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFG--HKS 85 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEEC--CTT
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEe--eCC
Confidence 4568999999999999999999976 68999999997543211 1246889999999999999999999984 456
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~kl~Df 156 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQHW-----ILHRDLKPNNLLLDENGVLKLADF 156 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHCC-----EECCCCCHHHEEEcCCCCEEEEec
Confidence 78999999986 8988887543 24888899999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc-
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL- 539 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 539 (589)
|+++....... ......+|+.|+|||.+.+. .++.++|||||||++|||++|..||............+.....+..
T Consensus 157 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 157 GLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235 (346)
T ss_dssp GGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChh
Confidence 99987654321 22334578899999998764 4899999999999999999999998765432221111111100000
Q ss_pred ----------------CCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 540 ----------------KGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 540 ----------------~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
....+ ......+.+++..|++.||++|||+.|++++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 00001 223467999999999999999999999999877643
No 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.2e-40 Score=339.53 Aligned_cols=262 Identities=19% Similarity=0.315 Sum_probs=202.1
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCC------C
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG------R 380 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~ 380 (589)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++.... .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57888999999999999999984 789999999865543 223457889999999999999999999986543 3
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++ +|.+.+..... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~-----ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNK-----ILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTSCEEECC
T ss_pred ceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHCC-----eeCCCCCHHHEEEcCCCCEEEcc
Confidence 568999999975 78777765432 4899999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCc---eeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhc
Q 007788 461 CGLHKLLADDI---VFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFID 536 (589)
Q Consensus 461 fGla~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 536 (589)
||+++...... ........+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||............ .....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i-~~~~~ 246 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI-SQLCG 246 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHHhC
Confidence 99998664221 112233457888999998876 45899999999999999999999999764332111110 00000
Q ss_pred ---cccC----------------C-CCC-HH------HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 537 ---RNLK----------------G-KFS-ES------EAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 537 ---~~~~----------------~-~~~-~~------~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
+... . ... .. ....+.+++.+|++.||++|||++|++++-+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 0000 0 000 00 1345889999999999999999999999877644
No 188
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.3e-41 Score=348.61 Aligned_cols=261 Identities=18% Similarity=0.277 Sum_probs=199.4
Q ss_pred HHhhccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCC----
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---- 379 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---- 379 (589)
+...++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++||||+++++++....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567899999999999999999987 4799999999875432 2336899999999999999999885432
Q ss_pred --------------------------------CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHH
Q 007788 380 --------------------------------RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGY 427 (589)
Q Consensus 380 --------------------------------~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~ 427 (589)
....++||||++ |+|.+.+.........+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 234789999998 58888887543334569999999999999999999
Q ss_pred hcCCCCCCCCeEecCCCCCCeeec-CCCceEEccccccccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHH
Q 007788 428 LHSSEVNKPAIVHRNLSVEKVLID-QQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFG 505 (589)
Q Consensus 428 LH~~~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~G 505 (589)
||+.+ |+||||||+||+++ .++.+||+|||+++...... ......++..|+|||.+.+. .++.++||||+|
T Consensus 157 LH~~g-----i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 157 IHSLG-----ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHTTT-----EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHCc-----CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 99988 99999999999998 68899999999998764432 22234568889999998775 489999999999
Q ss_pred HHHHHHHhCCCCcchhHHHHHhhhhHH--------Hh--hccc--------cCC-----CCCHHHHHHHHHHHHHhcccC
Q 007788 506 VIILQILTGSLVLTSSMRLAAESATFE--------NF--IDRN--------LKG-----KFSESEAAKLGKMALVCTHED 562 (589)
Q Consensus 506 vvl~elltg~~p~~~~~~~~~~~~~~~--------~~--~~~~--------~~~-----~~~~~~~~~l~~l~~~C~~~d 562 (589)
|++|||++|+.||.+............ .+ .++. ... ..+...+..+.+++.+|++.|
T Consensus 230 ~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 999999999999976433221111110 00 0000 000 012234567899999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 007788 563 PENRPTMEAVIEELTV 578 (589)
Q Consensus 563 p~~RPs~~evl~~L~~ 578 (589)
|++|||+.|++++-+.
T Consensus 310 P~~R~t~~e~l~hp~f 325 (383)
T 3eb0_A 310 PDLRINPYEAMAHPFF 325 (383)
T ss_dssp GGGSCCHHHHHTSGGG
T ss_pred hhhCCCHHHHhcCHHH
Confidence 9999999999987553
No 189
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-40 Score=345.35 Aligned_cols=271 Identities=17% Similarity=0.260 Sum_probs=205.9
Q ss_pred ccCHHHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCc----------hHHHHHHHHHHHHhccCCCC
Q 007788 298 RLNLEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK----------SEEAEFVKGLYLLTSLRHEN 367 (589)
Q Consensus 298 ~~~~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~----------~~~~~~~~e~~~l~~l~H~n 367 (589)
+..++++....++|...+.||+|+||.||+|...+|+.||||++...... ...+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 34567888899999999999999999999999888999999998654321 12367999999999999999
Q ss_pred ccceeeeeecC---CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCC
Q 007788 368 IIRLRGFCCSR---GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLS 444 (589)
Q Consensus 368 iv~l~g~~~~~---~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk 444 (589)
|+++++++... .....++||||++ |+|.+++.... ..+++..+..++.||+.||+|||+.+ |+|||||
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dlk 161 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEAG-----VVHRDLH 161 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCC
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCc-----CEecCCC
Confidence 99999998643 2346899999997 68888887543 24899999999999999999999988 9999999
Q ss_pred CCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHH
Q 007788 445 VEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMR 523 (589)
Q Consensus 445 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~ 523 (589)
|+||+++.++.+||+|||+++...... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....
T Consensus 162 p~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 162 PGNILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp GGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred hHHEEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 999999999999999999997554332 2223457788999999877 6789999999999999999999999975432
Q ss_pred HHHhhhh-------------------HHHhhccccCCC-------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 524 LAAESAT-------------------FENFIDRNLKGK-------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 524 ~~~~~~~-------------------~~~~~~~~~~~~-------~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
....... ..+.+....... ........+.+++..|++.||++|||+.|++++-+
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 2111110 011111111100 01122456889999999999999999999999866
Q ss_pred hh
Q 007788 578 VA 579 (589)
Q Consensus 578 ~~ 579 (589)
..
T Consensus 320 f~ 321 (362)
T 3pg1_A 320 FE 321 (362)
T ss_dssp GT
T ss_pred hh
Confidence 43
No 190
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=342.20 Aligned_cols=254 Identities=13% Similarity=0.196 Sum_probs=202.1
Q ss_pred hhccCccccccccCCCccEEEEE------ecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccC---CCCccceeeeeec
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGT------LRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR---HENIIRLRGFCCS 377 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~ 377 (589)
..++|...+.||+|+||.||+|. ..+++.||||++... ...++..|++++.+++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 45778889999999999999994 446889999999754 2446778888888886 9999999999854
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcC-CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC----
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEG-SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---- 452 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---- 452 (589)
.+..++||||+++|+|.+++..... ....++|..++.|+.||+.||+|||+.+ |+||||||+|||++.
T Consensus 139 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-----ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 139 --QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-----IIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp --SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCSGGGEEECGGGTC
T ss_pred --CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-----eecCCCCHHHEEecccccC
Confidence 4678999999999999999986432 2345999999999999999999999988 999999999999998
Q ss_pred -------CCceEEccccccccccC-CceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHH
Q 007788 453 -------QFNPLIADCGLHKLLAD-DIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL 524 (589)
Q Consensus 453 -------~~~~kl~DfGla~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~ 524 (589)
++.+||+|||+++.+.. ..........+|.+|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 89999999999975532 1112334556899999999999999999999999999999999999999654221
Q ss_pred HHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHhhhc
Q 007788 525 AAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENR-PTMEAVIEELTVAAP 581 (589)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~R-Ps~~evl~~L~~~~~ 581 (589)
. .. +....... ...+.+.+++..|++.+|.+| |+++++.+.|+..-+
T Consensus 292 ~---~~----~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 292 E---CK----PEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp E---EE----ECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred c---ee----echhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0 00 11111111 124567789999999999999 678888877776543
No 191
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.5e-41 Score=350.33 Aligned_cols=257 Identities=13% Similarity=0.064 Sum_probs=186.2
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHH---HHHhccCCCCcccee-------ee
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGL---YLLTSLRHENIIRLR-------GF 374 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~ 374 (589)
...|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+ ..++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345778899999999999999975 789999999987653 23345677774 55555 799988754 33
Q ss_pred eecCCC---------------CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHH------HHHHHHHHHHhHHhcCCCC
Q 007788 375 CCSRGR---------------GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR------VSIIIGIAKGIGYLHSSEV 433 (589)
Q Consensus 375 ~~~~~~---------------~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~ 433 (589)
+..... ...++||||++ |+|.+++..... .+.+..+ +.++.||+.||+|||+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~- 214 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSKG- 214 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-
Confidence 322211 34799999998 899999987532 2455566 788899999999999988
Q ss_pred CCCCeEecCCCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccC--CCCCCcchhhhHHHHHHHH
Q 007788 434 NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQI 511 (589)
Q Consensus 434 ~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvvl~el 511 (589)
|+||||||+|||++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 215 ----ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 215 ----LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp ----EEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred ----CccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 999999999999999999999999999876532 224456688999999987 6799999999999999999
Q ss_pred HhCCCCcchhHHHHHhhhh---HHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 512 LTGSLVLTSSMRLAAESAT---FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 512 ltg~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
+||+.||............ .................+..+.+++.+||+.||++|||+.|++++-+.
T Consensus 287 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f 356 (371)
T 3q60_A 287 WCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF 356 (371)
T ss_dssp HHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHH
T ss_pred HhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHH
Confidence 9999999765321110000 000001111111123446789999999999999999999999987654
No 192
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.5e-41 Score=343.39 Aligned_cols=254 Identities=19% Similarity=0.308 Sum_probs=201.3
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|+..+.||+|+||.||+|..+ +|+.||||++..... .+.+|++++.++ +||||+++++++. +.+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~--~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYD--DGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEE--CSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEE--cCCEEEE
Confidence 467889999999999999999976 689999999976542 234678888888 7999999999984 4578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC----CceEEccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ----FNPLIADC 461 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~----~~~kl~Df 461 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ +.+||+||
T Consensus 94 v~E~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~g-----ivHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQG-----VVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp EECCCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 999999999999997543 4899999999999999999999998 9999999999998543 35999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc--
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL-- 539 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 539 (589)
|+++....... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+.....
T Consensus 165 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~i~~~~~~~ 242 (342)
T 2qr7_A 165 GFAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-PEEILARIGSGKFSL 242 (342)
T ss_dssp TTCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-HHHHHHHHHHCCCCC
T ss_pred CCcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-HHHHHHHHccCCccc
Confidence 99987654321 1223457889999999988889999999999999999999999997531100 0111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 540 KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 540 ~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
........+..+.+++..|++.||++||++.|++++-+..
T Consensus 243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~ 282 (342)
T 2qr7_A 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282 (342)
T ss_dssp CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence 1112234567789999999999999999999999987763
No 193
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.9e-40 Score=336.78 Aligned_cols=257 Identities=18% Similarity=0.299 Sum_probs=197.8
Q ss_pred ccCccc-cccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEV-NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~l 385 (589)
+.|... +.||+|+||.||+|... +++.||||++.... ......+.+|++++.++ +||||+++++++.. .+..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~--~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE--EDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--CCEEEE
Confidence 456663 78999999999999965 78999999997654 34456789999999985 79999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc---eEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---PLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 159 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNKG-----IAHRDLKPENILCEHPNQVSPVKICDFD 159 (316)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEESCSSSSCSEEECCTT
T ss_pred EEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCC-----ceeCCCCHHHEEEccCCCcCceEEEEcc
Confidence 999999999999998754 3899999999999999999999988 999999999999998776 9999999
Q ss_pred ccccccCCce------eeeecCCccccccCcccccC-----CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHH------
Q 007788 463 LHKLLADDIV------FSVLKTSAAMGYLAPEYVTT-----GRFTERSDIFAFGVIILQILTGSLVLTSSMRLA------ 525 (589)
Q Consensus 463 la~~~~~~~~------~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~------ 525 (589)
++........ .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 239 (316)
T 2ac3_A 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239 (316)
T ss_dssp CCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC---
T ss_pred CccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc
Confidence 9876542211 11123347889999999875 558899999999999999999999996532100
Q ss_pred ----H-hhhhHHHhhccccCCCCCH----HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 526 ----A-ESATFENFIDRNLKGKFSE----SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 526 ----~-~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
. .......+..... ..+. ..+..+.+++.+|++.||++|||+.|++++-+..
T Consensus 240 ~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~ 300 (316)
T 2ac3_A 240 EACPACQNMLFESIQEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300 (316)
T ss_dssp -CCHHHHHHHHHHHHHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred ccchhHHHHHHHHHhccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence 0 0001111111111 1222 2356789999999999999999999999986653
No 194
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=340.30 Aligned_cols=264 Identities=21% Similarity=0.368 Sum_probs=203.8
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCC
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRG 379 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 379 (589)
.++....++|...+.||+|+||.||+|... +++.||||++.... .....+.+|+.++.++ +||||+++++++....
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 344456788999999999999999999974 78999999997553 2345788999999999 7999999999986542
Q ss_pred ----CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc
Q 007788 380 ----RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 380 ----~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
.+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQHK-----VIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEECTTCC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCcHHHEEEcCCCC
Confidence 4678999999999999999986532 24899999999999999999999988 999999999999999999
Q ss_pred eEEccccccccccCCceeeeecCCccccccCccccc-----CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh
Q 007788 456 PLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT 530 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~ 530 (589)
+||+|||++........ ......++..|+|||.+. +..++.++||||||+++|||++|+.||.........
T Consensus 168 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--- 243 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL--- 243 (326)
T ss_dssp EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---
T ss_pred EEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH---
Confidence 99999999887643221 122345788899999987 567899999999999999999999999654322111
Q ss_pred HHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 531 FENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+.............+..+.+++..||+.||++||++++++++-+..
T Consensus 244 -~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~ 291 (326)
T 2x7f_A 244 -FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291 (326)
T ss_dssp -HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHH
T ss_pred -HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHh
Confidence 111111111111223456789999999999999999999999876543
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.3e-40 Score=327.44 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=198.5
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++++++||||+++++++.. .+..++
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 88 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST--PTDFFM 88 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec--CCeEEE
Confidence 57888899999999999999986 799999999865321 2234578899999999999999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRHM-----VVHRDLKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp EEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHC-----SSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred EEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCChhhEEECCCCCEEEeeccccc
Confidence 999999999999997653 3899999999999999999999988 9999999999999999999999999998
Q ss_pred cccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFS 544 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (589)
....... .....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ...+.... ...+
T Consensus 160 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~--~~~~ 231 (276)
T 2h6d_A 160 MMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL----FKKIRGGV--FYIP 231 (276)
T ss_dssp CCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCC--CCCC
T ss_pred ccCCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----HHHhhcCc--ccCc
Confidence 7654321 123457788999999988765 6899999999999999999999975432211 11111111 1123
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 545 ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 545 ~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
......+.+++..|++.||++|||++|++++-+.
T Consensus 232 ~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~ 265 (276)
T 2h6d_A 232 EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWF 265 (276)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence 3345678999999999999999999999998665
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.1e-40 Score=335.19 Aligned_cols=253 Identities=16% Similarity=0.241 Sum_probs=201.6
Q ss_pred ccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||.||+|.. .+++.||||++... ....+.+|++++.+++ ||||+++++++........++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 6788899999999999999986 47899999998743 2457899999999997 9999999999976556788999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC-ceEEccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF-NPLIADCGLHK 465 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~-~~kl~DfGla~ 465 (589)
|||+++++|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSMG-----IMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhCC-----eeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 999999999999852 788999999999999999999988 99999999999999776 89999999998
Q ss_pred cccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh---------hhhHHHhh
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE---------SATFENFI 535 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~---------~~~~~~~~ 535 (589)
....... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......... .....+.+
T Consensus 180 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (330)
T 3nsz_A 180 FYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257 (330)
T ss_dssp ECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred EcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHH
Confidence 7654322 223457788999999887 66899999999999999999999999532111000 00111111
Q ss_pred ccc-----------------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 536 DRN-----------------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 536 ~~~-----------------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+.. ............+.+++..|++.||++|||++|++++-+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~ 324 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 324 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGT
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHh
Confidence 100 00111122467789999999999999999999999886653
No 197
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8.3e-40 Score=349.68 Aligned_cols=261 Identities=16% Similarity=0.276 Sum_probs=187.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCC---CCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---RGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---~~~~ 383 (589)
++|...+.||+|+||.||+|... +++.||||++..... ....+.+.+|++++++++|||||++++++.... ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57889999999999999999876 789999999975432 334567899999999999999999999985432 2568
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+ +|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~~-----iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSAG-----ILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhCC-----cCCCCCChhhEEECCCCCEeeccccc
Confidence 9999998 579999987543 4999999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCce--------------------------eeeecCCccccccCcccc-cCCCCCCcchhhhHHHHHHHHHh---
Q 007788 464 HKLLADDIV--------------------------FSVLKTSAAMGYLAPEYV-TTGRFTERSDIFAFGVIILQILT--- 513 (589)
Q Consensus 464 a~~~~~~~~--------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~s~Gvvl~ellt--- 513 (589)
++....... .......+|..|+|||++ ....++.++|||||||++|||+|
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 987642210 112334568889999976 45679999999999999999999
Q ss_pred --------CCCCcchhHHHH----------------HhhhhHHHhh-----------------------cc---ccC---
Q 007788 514 --------GSLVLTSSMRLA----------------AESATFENFI-----------------------DR---NLK--- 540 (589)
Q Consensus 514 --------g~~p~~~~~~~~----------------~~~~~~~~~~-----------------------~~---~~~--- 540 (589)
|+.+|.+..... .....+..++ .. ...
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 555554321100 0000000000 00 000
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
....+.....+.+|+.+||+.||++|||++|++++-+..
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~ 401 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhh
Confidence 000112356788999999999999999999999987653
No 198
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.7e-40 Score=337.15 Aligned_cols=260 Identities=22% Similarity=0.373 Sum_probs=200.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-hHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||.||+|... +|+.||||++...... .....+.+|++++++++||||+++++++.. .+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 102 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK--KKRWYLV 102 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec--CCEEEEE
Confidence 57888899999999999999986 5899999998765433 334668899999999999999999999954 4788999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~-----ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp EECCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EecCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHCC-----EEccCcChheEEEcCCCcEEEEeCCCcee
Confidence 99999999988865443 3899999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH----------HH--
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF----------EN-- 533 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~----------~~-- 533 (589)
...... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||............. ..
T Consensus 174 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (331)
T 4aaa_A 174 LAAPGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred ecCCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHh
Confidence 643321 22234578889999999875 68999999999999999999999997543221111000 00
Q ss_pred --------hhccccCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 534 --------FIDRNLKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 534 --------~~~~~~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+......+ +..+..+.+++.+||+.||++|||++|++++-+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 312 (331)
T 4aaa_A 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM 312 (331)
T ss_dssp HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence 00000111111 123567999999999999999999999998876543
No 199
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=6e-40 Score=330.55 Aligned_cols=258 Identities=21% Similarity=0.380 Sum_probs=199.2
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecC--------
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR-------- 378 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-------- 378 (589)
.++|+..+.||+|+||.||+|... +++.||||++... ......+.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467889999999999999999975 7899999999653 34456789999999999999999999988643
Q ss_pred ---CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc
Q 007788 379 ---GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN 455 (589)
Q Consensus 379 ---~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~ 455 (589)
..+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQG-----IIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhCC-----eecccCCHHhEEEcCCCC
Confidence 2357899999999999999998643 24788999999999999999999988 999999999999999999
Q ss_pred eEEccccccccccCCc-------------eeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchh
Q 007788 456 PLIADCGLHKLLADDI-------------VFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSS 521 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~ 521 (589)
+||+|||++....... ........++..|+|||.+.+. .++.++||||||+++|||++ |+...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998764321 1112234577889999999764 68999999999999999998 44332
Q ss_pred HHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 522 MRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.........+.. .........+...+..+.+++..||+.||++|||++|++++-+..
T Consensus 232 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~ 288 (303)
T 1zy4_A 232 MERVNILKKLRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP 288 (303)
T ss_dssp HHHHHHHHHHHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred hhHHHHHHhccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence 221111111111 111222233445566789999999999999999999999986654
No 200
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=329.52 Aligned_cols=259 Identities=18% Similarity=0.239 Sum_probs=205.1
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC---chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC---KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~ 383 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++...+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367899999999999999999975 689999999975421 2345679999999999999999999999876656788
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||++++ |.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-----i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQG-----IVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCCcccEEEcCCCcEEeecccc
Confidence 9999999876 777776543 235899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCc-eeeeecCCccccccCcccccCCC--CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 464 HKLLADDI-VFSVLKTSAAMGYLAPEYVTTGR--FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 464 a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
+....... ........++..|+|||.+.+.. ++.++||||||+++|||++|+.||........ ...+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~i~~~~-- 229 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL----FENIGKGS-- 229 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHCC--
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH----HHHHhcCC--
Confidence 98764321 11223445788999999987644 37799999999999999999999976432211 11111111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+......+.+++.+||+.||++|||++|++++.+...
T Consensus 230 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 230 YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 1223345567889999999999999999999999876543
No 201
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=331.82 Aligned_cols=257 Identities=19% Similarity=0.356 Sum_probs=203.0
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+|+.++.+++||||+++++++.. .+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFK--NTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEE
Confidence 3567889999999999999999976 58999999997643 23568899999999999999999999865 467899
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 102 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFMR-----KIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp EEECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EeecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----CcCCCcCHHHEEECCCCCEEEeecccch
Confidence 999999999999997543 24899999999999999999999988 9999999999999999999999999997
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCH
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSE 545 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (589)
....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.......... .... ........+.
T Consensus 174 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~ 249 (314)
T 3com_A 174 QLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPT--NPPPTFRKPE 249 (314)
T ss_dssp ECBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHH--SCCCCCSSGG
T ss_pred hhhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhc--CCCcccCCcc
Confidence 6654322 2233457888999999999999999999999999999999999997543221110 0000 0111111223
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 546 SEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 546 ~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
..+..+.+++..||+.||.+|||+.+++++-+...
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~ 284 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhc
Confidence 34567899999999999999999999998766543
No 202
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.2e-40 Score=354.49 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=205.3
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++.. .+..++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l 98 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED--SSSFYI 98 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--CCEEEE
Confidence 357889999999999999999976 789999999864321 2345678999999999999999999999854 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec---CCCceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID---QQFNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~---~~~~~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||
T Consensus 99 v~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKHN-----IVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred EEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeccCchHHEEEecCCCCCCEEEEECC
Confidence 999999999999987654 3899999999999999999999988 99999999999995 56679999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC-
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG- 541 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 541 (589)
+++...... ......+|+.|+|||++.+ .++.++||||+||++|||++|+.||......... ..+.......
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~ 242 (486)
T 3mwu_A 170 LSTCFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAFD 242 (486)
T ss_dssp CTTTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCSC
T ss_pred cCeECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCC
Confidence 998765432 2234568899999999875 5999999999999999999999999765432211 1111111111
Q ss_pred -CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 -KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 -~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
......+..+.+++..||+.||++|||+.|++++-+..
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~ 281 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHH
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhc
Confidence 11123456789999999999999999999999987654
No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-40 Score=342.28 Aligned_cols=261 Identities=20% Similarity=0.323 Sum_probs=204.3
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCC---CCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG---RGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~---~~~~ 383 (589)
.++|+..+.||+|+||.||+|... +++.||||++...........+.+|++++.+++||||+++++++.... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457888999999999999999975 688999999986554555578999999999999999999999985432 2468
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+. |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSAN-----VLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCChHhEEECCCCCEEEEeCcc
Confidence 99999997 5999998653 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCceee--eecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH--------
Q 007788 464 HKLLADDIVFS--VLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE-------- 532 (589)
Q Consensus 464 a~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~-------- 532 (589)
++......... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 98765432211 123467889999998765 4589999999999999999999999965432211111000
Q ss_pred -----------Hhhccc-cCCCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 533 -----------NFIDRN-LKGKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 533 -----------~~~~~~-~~~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...... .....+ ......+.+++.+|++.||++|||+.|++++-+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 318 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence 000000 000011 12346788999999999999999999999987653
No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.2e-40 Score=341.22 Aligned_cols=258 Identities=23% Similarity=0.362 Sum_probs=206.3
Q ss_pred HHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-------hHHHHHHHHHHHHhcc-CCCCccceeee
Q 007788 304 VESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-------SEEAEFVKGLYLLTSL-RHENIIRLRGF 374 (589)
Q Consensus 304 l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-------~~~~~~~~e~~~l~~l-~H~niv~l~g~ 374 (589)
.....++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445678999999999999999999986 7999999998765321 1235678999999999 79999999999
Q ss_pred eecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC
Q 007788 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 454 (589)
Q Consensus 375 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~ 454 (589)
+.. .+..++||||+++++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++
T Consensus 169 ~~~--~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~g-----i~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 169 YES--SSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHANN-----IVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEB--SSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTC
T ss_pred Eee--CCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEECCCC
Confidence 854 478999999999999999998653 3899999999999999999999988 99999999999999999
Q ss_pred ceEEccccccccccCCceeeeecCCccccccCcccccC------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhh
Q 007788 455 NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAES 528 (589)
Q Consensus 455 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~ 528 (589)
.+||+|||++........ .....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~- 314 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML- 314 (365)
T ss_dssp CEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-
T ss_pred CEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH-
Confidence 999999999887654321 233567889999998863 35888999999999999999999999754322111
Q ss_pred hhHHHhhccccCCCCC--HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 529 ATFENFIDRNLKGKFS--ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 529 ~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..+.........+ ...+..+.+++..|++.||++|||+.|++++-+.
T Consensus 315 ---~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f 363 (365)
T 2y7j_A 315 ---RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363 (365)
T ss_dssp ---HHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred ---HHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence 1111111111000 1224568999999999999999999999987553
No 205
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.3e-40 Score=338.08 Aligned_cols=261 Identities=20% Similarity=0.288 Sum_probs=205.4
Q ss_pred HHhhccCccc-cccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccC-CCCccceeeeeecCCC
Q 007788 305 ESATQCFSEV-NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGR 380 (589)
Q Consensus 305 ~~~~~~f~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~ 380 (589)
+...++|... +.||+|+||.||+|... +++.||||++..... ......+.+|+.++.+++ ||||+++++++. ..
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~--~~ 101 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE--NT 101 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE--CS
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE--eC
Confidence 3344567766 88999999999999976 689999999976432 334568899999999995 699999999984 45
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCceE
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPL 457 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~~k 457 (589)
+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+|
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~g-----ivH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQNN-----IVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEESCBTTBCCEE
T ss_pred CeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCcCChHHEEEecCCCCCcEE
Confidence 78999999999999999986532 235899999999999999999999988 999999999999998 78999
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
|+|||+++....... .....+++.|+|||.+.+..++.++||||||+++|||++|+.||............ .. ...
T Consensus 175 L~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-~~-~~~ 250 (327)
T 3lm5_A 175 IVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI-SQ-VNV 250 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HH-TCC
T ss_pred EeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH-Hh-ccc
Confidence 999999987654321 22345788999999999999999999999999999999999999764332211111 11 111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 538 NLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 538 ~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.............+.+++..|++.||++|||++|++++-+.
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~ 291 (327)
T 3lm5_A 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291 (327)
T ss_dssp CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhh
Confidence 11122223456678999999999999999999999988664
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.4e-40 Score=333.77 Aligned_cols=255 Identities=19% Similarity=0.327 Sum_probs=200.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|+..+.||+|+||.||+|... +++.||+|++.... ......|.+|++++++++||||+++++++.. .+..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYH--DGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--C-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee--CCeEEEE
Confidence 467888999999999999999986 58999999987654 3445689999999999999999999999854 4678999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 95 ~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSKR-----IIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp EECCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred EEeCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcCC-----cccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 999999999999876432 3899999999999999999999988 99999999999999999999999998754
Q ss_pred ccCCceeeeecCCccccccCcccc-----cCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc-C
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYV-----TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL-K 540 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~ 540 (589)
...... ......++..|+|||.+ .+..++.++||||||+++|||++|+.||......... ........ .
T Consensus 167 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~ 241 (302)
T 2j7t_A 167 NLKTLQ-KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL----LKIAKSDPPT 241 (302)
T ss_dssp HHHHHH-C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH----HHHHHSCCCC
T ss_pred cccccc-ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH----HHHhccCCcc
Confidence 322111 11233578889999998 4667899999999999999999999999754322111 11111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
...+...+..+.+++..||+.||++|||+.|++++-+.
T Consensus 242 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 279 (302)
T 2j7t_A 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279 (302)
T ss_dssp CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTT
T ss_pred cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHH
Confidence 11233445678999999999999999999999986543
No 207
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.4e-39 Score=336.64 Aligned_cols=269 Identities=18% Similarity=0.236 Sum_probs=195.3
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
++.....++|...+.||+|+||.||+|... +|+.||||++..... ....+.++++.+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 455667789999999999999999999985 689999999865432 22356778888999999999999999864321
Q ss_pred -----CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhc--CCCCCCCCeEecCCCCCCeeecC-
Q 007788 381 -----GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLH--SSEVNKPAIVHRNLSVEKVLIDQ- 452 (589)
Q Consensus 381 -----~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~~~ivH~dlk~~Nill~~- 452 (589)
...++||||+++ +|.+.+.........+++..+..++.|++.||+||| +.+ |+||||||+|||++.
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-----ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-----VCHRDIKPHNVLVNEA 167 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-----CBCSCCCGGGEEEETT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-----eecCcCCHHHEEEeCC
Confidence 237899999976 666555443333445899999999999999999999 777 999999999999997
Q ss_pred CCceEEccccccccccCCceeeeecCCccccccCcccccCCC-CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
++.+||+|||+++....... .....+|..|+|||++.+.. ++.++|||||||++|||+||+.||.............
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 245 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245 (360)
T ss_dssp TTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHH
Confidence 89999999999987654332 22345788899999987654 8999999999999999999999997543221111111
Q ss_pred H----------Hhhccc----------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 532 E----------NFIDRN----------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 532 ~----------~~~~~~----------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
. ..+++. ............+.+++..|++.||++|||+.|++++-+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 320 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence 0 000000 000111224678999999999999999999999999876543
No 208
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.3e-40 Score=365.01 Aligned_cols=253 Identities=19% Similarity=0.278 Sum_probs=207.8
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCC--CchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCe
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTS--CKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGE 382 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~--~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 382 (589)
..++|...+.||+|+||.||+|+.. +++.||||+++... .......+..|..++..+ +||||+++++++ .+.+.
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~--~~~~~ 416 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF--QTMDR 416 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC--BCSSE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE--EeCCE
Confidence 4567999999999999999999976 68899999997532 123345678899999988 799999999988 44578
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~g-----IiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSKG-----IIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTS-----EECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC-----eEeccCChhhEEEcCCCcEEEeecc
Confidence 999999999999999998764 3899999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCC
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGK 542 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (589)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... .+..+..... .
T Consensus 488 la~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~----~~~~i~~~~~--~ 560 (674)
T 3pfq_A 488 MCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----LFQSIMEHNV--A 560 (674)
T ss_dssp TCEECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHSSCC--C
T ss_pred eeeccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH----HHHHHHhCCC--C
Confidence 9986432221 2234568999999999999999999999999999999999999997654322 2223333222 2
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCH-----HHHHHHHH
Q 007788 543 FSESEAAKLGKMALVCTHEDPENRPTM-----EAVIEELT 577 (589)
Q Consensus 543 ~~~~~~~~l~~l~~~C~~~dp~~RPs~-----~evl~~L~ 577 (589)
++...+..+.+++..|++.||++||++ +||+++-+
T Consensus 561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~f 600 (674)
T 3pfq_A 561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 600 (674)
T ss_dssp CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGG
T ss_pred CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCcc
Confidence 344566789999999999999999997 78876644
No 209
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.8e-40 Score=339.32 Aligned_cols=257 Identities=17% Similarity=0.273 Sum_probs=195.4
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCC----CC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~ 381 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|+.+++.++||||+++++++.... ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357888999999999999999875 689999999976432 334567889999999999999999999985432 13
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~~-----ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHCC-----eecccCCHHHEEEcCCCCEEEEEe
Confidence 78999999974 78888752 2889999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH----------
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF---------- 531 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~---------- 531 (589)
|+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||.+...........
T Consensus 172 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 249 (371)
T 2xrw_A 172 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 249 (371)
T ss_dssp CC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHH
T ss_pred eccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998765432 1223457888999999999999999999999999999999999997543321111100
Q ss_pred --------HHhhc---------------cccCCCC---CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 532 --------ENFID---------------RNLKGKF---SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 532 --------~~~~~---------------~~~~~~~---~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..... ....... .......+.+++.+|++.||++|||++|++++-+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 322 (371)
T 2xrw_A 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322 (371)
T ss_dssp HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence 00000 0000000 12236788999999999999999999999998764
No 210
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.7e-41 Score=337.79 Aligned_cols=265 Identities=22% Similarity=0.353 Sum_probs=187.1
Q ss_pred HhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
...++|...+.||+|+||.||+|... +++.||||++..........++.+|+.++.+++||||+++++++.. .+..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 89 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV--KDELW 89 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES--SSCEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee--cCCcE
Confidence 34578889999999999999999864 6899999998765544455678999999999999999999999854 46789
Q ss_pred EEEEeCCCCChHHHhhhhc----CCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 385 LIYDFAPKGKLSKYLDQEE----GSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+||||+++++|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~kl~d 164 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-----QIHRDVKAGNILLGEDGSVQIAD 164 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEECTTCCEEECC
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCCCCChhhEEEcCCCCEEEEe
Confidence 9999999999999997521 12345899999999999999999999988 99999999999999999999999
Q ss_pred ccccccccCCcee----eeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhh
Q 007788 461 CGLHKLLADDIVF----SVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFI 535 (589)
Q Consensus 461 fGla~~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 535 (589)
||++......... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||................
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~- 243 (303)
T 2vwi_A 165 FGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND- 243 (303)
T ss_dssp CHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSS-
T ss_pred ccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccC-
Confidence 9998765432111 1123357888999999876 568999999999999999999999997543211110000000
Q ss_pred cccc-----CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 536 DRNL-----KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 536 ~~~~-----~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.+.. ........+..+.+++..||+.||++||++.|++++-+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~ 291 (303)
T 2vwi_A 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291 (303)
T ss_dssp CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC
T ss_pred CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence 0000 001112234578899999999999999999999987554
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.1e-40 Score=354.76 Aligned_cols=254 Identities=23% Similarity=0.342 Sum_probs=203.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc------------hHHHHHHHHHHHHhccCCCCccceeee
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK------------SEEAEFVKGLYLLTSLRHENIIRLRGF 374 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~------------~~~~~~~~e~~~l~~l~H~niv~l~g~ 374 (589)
.++|...+.||+|+||.||+|... +++.||||++...... .....+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467899999999999999999976 6889999999764321 234678999999999999999999999
Q ss_pred eecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCC
Q 007788 375 CCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQF 454 (589)
Q Consensus 375 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~ 454 (589)
+. +.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 115 ~~--~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~ 183 (504)
T 3q5i_A 115 FE--DKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKHN-----IVHRDIKPENILLENKN 183 (504)
T ss_dssp EE--CSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEESSTT
T ss_pred EE--cCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eEeCCCcHHHEEEecCC
Confidence 94 4578999999999999999997654 3899999999999999999999988 99999999999998776
Q ss_pred ---ceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 455 ---NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 455 ---~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
.+||+|||+++...... ......+|+.|+|||++. +.++.++||||+||++|||++|+.||........ .
T Consensus 184 ~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~ 256 (504)
T 3q5i_A 184 SLLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI----I 256 (504)
T ss_dssp CCSSEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----H
T ss_pred CCccEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH----H
Confidence 69999999998765442 223445889999999987 4699999999999999999999999976533211 1
Q ss_pred HHhhccccCCCC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 532 ENFIDRNLKGKF--SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 532 ~~~~~~~~~~~~--~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+......... ....+..+.+++..|++.||.+|||++|++++-+..
T Consensus 257 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 306 (504)
T 3q5i_A 257 KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306 (504)
T ss_dssp HHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred HHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence 111111111100 012356789999999999999999999999987753
No 212
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.9e-40 Score=353.48 Aligned_cols=254 Identities=20% Similarity=0.317 Sum_probs=200.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|...+.||+|+||.||+|... ++..||||++..... ......+.+|+.++++++||||+++++++.. .+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED--KRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEEE
Confidence 357888999999999999999976 689999999976532 2334678999999999999999999999954 578999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC---CceEEcccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FNPLIADCG 462 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~---~~~kl~DfG 462 (589)
||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.. +.+||+|||
T Consensus 114 v~e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 114 VMECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKHN-----IVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 999999999999987654 3899999999999999999999988 9999999999999764 559999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC-
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG- 541 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 541 (589)
+++...... ......+|+.|+|||++. +.++.++||||+||++|||++|+.||......... ..+.......
T Consensus 185 ~a~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~~~~~ 257 (494)
T 3lij_A 185 LSAVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEIL----RKVEKGKYTFD 257 (494)
T ss_dssp TCEECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCC
T ss_pred CCeECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCC
Confidence 998765432 223346889999999886 56999999999999999999999999765432211 1111111111
Q ss_pred -CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 -KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 -~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
......+..+.+++..|++.||++|||+.|++++-+..
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~ 296 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence 11123456788999999999999999999999886643
No 213
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.5e-40 Score=337.78 Aligned_cols=262 Identities=18% Similarity=0.341 Sum_probs=184.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHH-HHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLY-LLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|...+.||+|+||.||+|... +|+.||||++..........++..|+. +++.++||||+++++++.. .+..++|
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~--~~~~~lv 99 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR--EGDCWIC 99 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe--CCceEEE
Confidence 57788899999999999999985 789999999987654445556666666 6777899999999999854 4788999
Q ss_pred EEeCCCCChHHHhhhhc-CCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 387 YDFAPKGKLSKYLDQEE-GSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
|||+++ +|.+++.... .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-----ivH~dlkp~NIll~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-----IIHRDIKPSNILLDRSGNIKLCDFGIS 173 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-----CCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-----EeECCCCHHHEEEcCCCCEEEccCCCc
Confidence 999975 8888876421 1234589999999999999999999997 7 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccc----cCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYV----TTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
+....... .....++..|+|||.+ .+..++.++||||||+++|||++|+.||..................+.+.
T Consensus 174 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 251 (327)
T 3aln_A 174 GQLVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLS 251 (327)
T ss_dssp CC--------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCC
T ss_pred eecccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCC
Confidence 87654321 2233578889999998 45678999999999999999999999997543211100000000001111
Q ss_pred CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 541 GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 541 ~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
..........+.+++..||+.||++||++.|++++.+...
T Consensus 252 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM 291 (327)
T ss_dssp CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence 1111234567999999999999999999999998766543
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-40 Score=356.20 Aligned_cols=254 Identities=21% Similarity=0.338 Sum_probs=207.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++++++||||+++++++.. .+..+
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~ 102 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED--KGYFY 102 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCEEE
Confidence 357888999999999999999986 789999999965432 3345679999999999999999999999854 57899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADC 461 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~Df 461 (589)
+||||+.+|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+||
T Consensus 103 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKNK-----IVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp EEECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred EEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 9999999999999997543 4899999999999999999999988 9999999999999 56789999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
|+++...... ......+|+.|+|||++.+ .++.++||||+||++|||++|+.||........ ...+.......
T Consensus 174 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~ 246 (484)
T 3nyv_A 174 GLSTHFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI----LKKVEKGKYTF 246 (484)
T ss_dssp THHHHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCC
T ss_pred eeeEEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCC
Confidence 9998765432 1223457889999999876 699999999999999999999999976543221 11121111111
Q ss_pred C--CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 K--FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 ~--~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
. .....+..+.+++..|++.||++|||+.|++++-+..
T Consensus 247 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~ 286 (484)
T 3nyv_A 247 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286 (484)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhc
Confidence 1 1123456789999999999999999999999987754
No 215
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-39 Score=336.51 Aligned_cols=261 Identities=19% Similarity=0.281 Sum_probs=202.6
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecC---CCCeE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR---GRGEC 383 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---~~~~~ 383 (589)
.++|...+.||+|+||.||+|... +|+.||||++...........+.+|++++++++||||+++++++... .....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357888899999999999999976 68999999997655455567789999999999999999999987542 13578
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+. |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~-----ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGSN-----VIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999997 6999998753 3899999999999999999999988 99999999999999999999999999
Q ss_pred cccccCCcee---------eeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh---
Q 007788 464 HKLLADDIVF---------SVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT--- 530 (589)
Q Consensus 464 a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~--- 530 (589)
++........ ......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9876532211 1122357888999998764 67899999999999999999999999754321111000
Q ss_pred -----------------HHHhhccccC-CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 531 -----------------FENFIDRNLK-GKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 531 -----------------~~~~~~~~~~-~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+.+..... ... ....+..+.+++.+|++.||++|||++|++++-+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 310 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 0011100000 000 112356788999999999999999999999986643
No 216
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.1e-40 Score=346.90 Aligned_cols=257 Identities=21% Similarity=0.316 Sum_probs=196.3
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCC----CCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG----RGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~~ 383 (589)
.+|...+.||+|+||.||+|+.. +|+.||||++..... .+.+|++++++++|||||++++++.... ....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 35778899999999999999986 689999999865431 2346999999999999999999885421 1236
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC-CceEEcccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ-FNPLIADCG 462 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~-~~~kl~DfG 462 (589)
++||||+++ +|.+.+.........+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-----EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCChhhEEEeCCCCeEEeccch
Confidence 789999976 677766543323346999999999999999999999988 9999999999999965 568999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH--------H
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE--------N 533 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~--------~ 533 (589)
+++...... ......+|..|+|||++.+. .++.++|||||||++|||++|+.||.+..........+. .
T Consensus 203 ~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 203 SAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp TCEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred hhhhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 998764432 12234578889999998765 799999999999999999999999975432211111110 0
Q ss_pred h--hccccCC-C------------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 534 F--IDRNLKG-K------------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 534 ~--~~~~~~~-~------------~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
+ ..+.... . +....+..+.+++.+|++.||++||++.|++++-+.
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f 340 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhh
Confidence 0 0111000 0 112235678999999999999999999999988665
No 217
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-39 Score=343.15 Aligned_cols=258 Identities=18% Similarity=0.231 Sum_probs=201.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhcc------CCCCccceeeeeecCCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL------RHENIIRLRGFCCSRGR 380 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~ 380 (589)
..+|+..+.||+|+||.||+|... +++.||||++... .....++.+|++++..+ .|+||+++++++.. .
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~--~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--R 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE--T
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc--C
Confidence 356888999999999999999875 5899999999754 33446778888888777 57799999999854 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc--eEE
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN--PLI 458 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~--~kl 458 (589)
+..++||||+. ++|.+++..... ..+++..+..|+.||+.||+|||+.+ |+||||||+|||++.++. +||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlKp~NILl~~~~~~~vkL 243 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKNR-----IIHCDLKPENILLKQQGRSGIKV 243 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHHT-----EECSCCSGGGEEESSTTSCCEEE
T ss_pred CeEEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----eecCCCCHHHeEEccCCCcceEE
Confidence 78999999996 699999976542 24899999999999999999999988 999999999999999887 999
Q ss_pred ccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhh--------
Q 007788 459 ADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESAT-------- 530 (589)
Q Consensus 459 ~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~-------- 530 (589)
+|||++...... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 244 ~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~ 319 (429)
T 3kvw_A 244 IDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS 319 (429)
T ss_dssp CCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred eecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 999999765432 22346788899999999999999999999999999999999999754322111100
Q ss_pred ---------HHHhhccccCC------------------------------C------CCHHHHHHHHHHHHHhcccCCCC
Q 007788 531 ---------FENFIDRNLKG------------------------------K------FSESEAAKLGKMALVCTHEDPEN 565 (589)
Q Consensus 531 ---------~~~~~~~~~~~------------------------------~------~~~~~~~~l~~l~~~C~~~dp~~ 565 (589)
...+++..-.. . ........+.+++.+||+.||++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~ 399 (429)
T 3kvw_A 320 QKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV 399 (429)
T ss_dssp HHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhh
Confidence 01111100000 0 00011456889999999999999
Q ss_pred CCCHHHHHHHHHhhhc
Q 007788 566 RPTMEAVIEELTVAAP 581 (589)
Q Consensus 566 RPs~~evl~~L~~~~~ 581 (589)
|||++|++++-+....
T Consensus 400 Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 400 RMTPGQALRHPWLRRR 415 (429)
T ss_dssp SCCHHHHHTSTTTC--
T ss_pred CCCHHHHhCChhhccC
Confidence 9999999998775443
No 218
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.9e-40 Score=338.51 Aligned_cols=257 Identities=16% Similarity=0.355 Sum_probs=205.4
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCch----------------HHHHHHHHHHHHhccCCCCccce
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKS----------------EEAEFVKGLYLLTSLRHENIIRL 371 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~----------------~~~~~~~e~~~l~~l~H~niv~l 371 (589)
.++|...+.||+|+||.||+|.. +++.||||++....... ....|.+|+.++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36788899999999999999999 89999999997542111 11689999999999999999999
Q ss_pred eeeeecCCCCeEEEEEEeCCCCChHHH------hhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcC-CCCCCCCeEecCCC
Q 007788 372 RGFCCSRGRGECFLIYDFAPKGKLSKY------LDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHS-SEVNKPAIVHRNLS 444 (589)
Q Consensus 372 ~g~~~~~~~~~~~lv~Ey~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~~ivH~dlk 444 (589)
++++.. .+..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ .+ |+|||||
T Consensus 109 ~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~-----i~H~dl~ 179 (348)
T 2pml_X 109 EGIITN--YDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEKN-----ICHRDVK 179 (348)
T ss_dssp SEEEES--SSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTSC-----EECCCCC
T ss_pred EEEEee--CCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccCC-----EeecCCC
Confidence 999854 4789999999999999999 54321 3459999999999999999999998 77 9999999
Q ss_pred CCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCC-CCCC-cchhhhHHHHHHHHHhCCCCcchhH
Q 007788 445 VEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTE-RSDIFAFGVIILQILTGSLVLTSSM 522 (589)
Q Consensus 445 ~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~s~Gvvl~elltg~~p~~~~~ 522 (589)
|+||+++.++.+||+|||.+...... ......++..|+|||.+.+. .++. ++||||||+++|||++|+.||....
T Consensus 180 p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 180 PSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp GGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999876544 23345678899999999887 5666 9999999999999999999997543
Q ss_pred HHHHhhhhHHHhhccccCCC-----------------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 523 RLAAESATFENFIDRNLKGK-----------------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.... ....+........ .....+..+.+++..||+.||++|||+.|++++-+...
T Consensus 257 ~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 328 (348)
T 2pml_X 257 SLVE---LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328 (348)
T ss_dssp CSHH---HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred cHHH---HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence 2100 1111111111100 01345678899999999999999999999998766443
No 219
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.2e-39 Score=328.19 Aligned_cols=260 Identities=20% Similarity=0.383 Sum_probs=200.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
++|+..+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++.. .+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec--CCceEEE
Confidence 57888899999999999999986 789999999875432 2223578899999999999999999999854 4689999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
|||++ ++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 81 ~e~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~-----i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp EECCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTSCEEECSTTHHHH
T ss_pred EEccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCCCCHHHeEEcCCCCEEECcchhhhh
Confidence 99997 699999976532 24889999999999999999999988 99999999999999999999999999876
Q ss_pred ccCCceeeeecCCccccccCcccccCCC-CCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc--------
Q 007788 467 LADDIVFSVLKTSAAMGYLAPEYVTTGR-FTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR-------- 537 (589)
Q Consensus 467 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-------- 537 (589)
...... ......++..|+|||.+.+.. ++.++||||||+++|||+||+.||................-.+
T Consensus 153 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 153 FGVPVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp HCCCSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccCCcc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHh
Confidence 543221 112335678899999998765 7999999999999999999999997643322111111110000
Q ss_pred ----ccCCCC-----------CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 538 ----NLKGKF-----------SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 538 ----~~~~~~-----------~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
...... ....+..+.+++.+|++.||++|||+.|++++-+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~ 288 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhh
Confidence 000000 012346788999999999999999999999876653
No 220
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-39 Score=327.17 Aligned_cols=255 Identities=23% Similarity=0.322 Sum_probs=205.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--------chHHHHHHHHHHHHhccC-CCCccceeeeeec
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--------KSEEAEFVKGLYLLTSLR-HENIIRLRGFCCS 377 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--------~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~ 377 (589)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888899999999999999986 689999999975431 122356889999999996 9999999999843
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
.+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 96 --~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dl~p~Nil~~~~~~~k 164 (298)
T 1phk_A 96 --NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIK 164 (298)
T ss_dssp --SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEECTTCCEE
T ss_pred --CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCcceEEEcCCCcEE
Confidence 578999999999999999998653 3899999999999999999999988 99999999999999999999
Q ss_pred EccccccccccCCceeeeecCCccccccCccccc------CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT------TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
|+|||++....... ......++..|+|||.+. ...++.++||||||+++|||++|+.||.........
T Consensus 165 l~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---- 238 (298)
T 1phk_A 165 LTDFGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML---- 238 (298)
T ss_dssp ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----
T ss_pred EecccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHH----
Confidence 99999998765432 122345788899999885 456889999999999999999999999654322111
Q ss_pred HHhhccccCC--CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 532 ENFIDRNLKG--KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 532 ~~~~~~~~~~--~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
..+....... ......+..+.+++..|++.||++|||+.|++++-+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~ 288 (298)
T 1phk_A 239 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288 (298)
T ss_dssp HHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhh
Confidence 1111111111 11134567899999999999999999999999876543
No 221
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.9e-39 Score=343.88 Aligned_cols=262 Identities=19% Similarity=0.280 Sum_probs=197.0
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC---Ce
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR---GE 382 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---~~ 382 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++..... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999975 688999999976432 3345678999999999999999999999864422 56
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.++||||+. |+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~g-----ivHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHESG-----IIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----CCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999986 59999997542 4899999999999999999999998 9999999999999999999999999
Q ss_pred ccccccCCcee---------------------eeecCCccccccCcccc-cCCCCCCcchhhhHHHHHHHHHhCCCCcc-
Q 007788 463 LHKLLADDIVF---------------------SVLKTSAAMGYLAPEYV-TTGRFTERSDIFAFGVIILQILTGSLVLT- 519 (589)
Q Consensus 463 la~~~~~~~~~---------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~s~Gvvl~elltg~~p~~- 519 (589)
+++........ ......+|..|+|||++ ....++.++|||||||++|||++|..|+.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 99876543211 12345678899999986 55669999999999999999998544432
Q ss_pred ----------hhHH-------------HHHhhhh-----------------------HHHhhccc-cCCCCC-----HHH
Q 007788 520 ----------SSMR-------------LAAESAT-----------------------FENFIDRN-LKGKFS-----ESE 547 (589)
Q Consensus 520 ----------~~~~-------------~~~~~~~-----------------------~~~~~~~~-~~~~~~-----~~~ 547 (589)
+... ....... ....+... ...... +..
T Consensus 255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T 3n9x_A 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334 (432)
T ss_dssp SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence 1100 0000000 00000000 000000 123
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 548 AAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 548 ~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
+..+.+++.+||+.||++|||++|++++-+..
T Consensus 335 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~ 366 (432)
T 3n9x_A 335 SDDGINLLESMLKFNPNKRITIDQALDHPYLK 366 (432)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGT
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcChhhh
Confidence 56788999999999999999999999986643
No 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=337.77 Aligned_cols=265 Identities=24% Similarity=0.326 Sum_probs=200.7
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR 380 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 380 (589)
+++....++|+..+.||+|+||.||+|..++ .||+|++..... ......|.+|+.++++++||||+++++++.. .
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS--P 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC--S
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec--C
Confidence 3444456788899999999999999999864 499999875432 2233467889999999999999999999954 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcc
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIAD 460 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~D 460 (589)
+..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++ ++.+||+|
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~-----i~H~dlkp~NIl~~-~~~~~l~D 172 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAKG-----ILHKDLKSKNVFYD-NGKVVITD 172 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCSTTEEEC---CCEECC
T ss_pred CceEEEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccCCChhhEEEe-CCCEEEee
Confidence 67899999999999999997643 24899999999999999999999988 99999999999998 67999999
Q ss_pred ccccccccCCce----eeeecCCccccccCcccccC---------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh
Q 007788 461 CGLHKLLADDIV----FSVLKTSAAMGYLAPEYVTT---------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE 527 (589)
Q Consensus 461 fGla~~~~~~~~----~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~ 527 (589)
||+++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 252 (319)
T 2y4i_B 173 FGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII 252 (319)
T ss_dssp CSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH
T ss_pred cCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999876532111 11223347788999999874 35788999999999999999999999754322111
Q ss_pred hhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 528 SATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
..+.............+..+.+++..||+.||++|||++++++.|+.+....
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 253 ----WQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ----HHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ----HHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111111111233456899999999999999999999999999887653
No 223
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.8e-39 Score=329.34 Aligned_cols=260 Identities=18% Similarity=0.320 Sum_probs=204.4
Q ss_pred HHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-chHHHHHHHHHHHHhccC--CCCccceeeeeecCCCC
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLR--HENIIRLRGFCCSRGRG 381 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~ 381 (589)
....++|...+.||+|+||.||+|...+++.||||++..... ......+.+|++++.+++ ||||+++++++.. .+
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~--~~ 101 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT--DQ 101 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC--SS
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec--CC
Confidence 344577899999999999999999998899999999976543 344578999999999997 5999999999854 46
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||| +.+++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||++++ +.+||+||
T Consensus 102 ~~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 102 YIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHG-----IVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp EEEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEEET-TEEEECCC
T ss_pred EEEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCcccEEEEC-CeEEEeec
Confidence 7999999 56889999998653 4899999999999999999999988 999999999999975 89999999
Q ss_pred cccccccCCcee-eeecCCccccccCcccccC-----------CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhh
Q 007788 462 GLHKLLADDIVF-SVLKTSAAMGYLAPEYVTT-----------GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESA 529 (589)
Q Consensus 462 Gla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~ 529 (589)
|+++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .
T Consensus 171 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~ 247 (313)
T 3cek_A 171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---S 247 (313)
T ss_dssp SSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH---H
T ss_pred cccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH---H
Confidence 999876543221 1223457889999999875 468889999999999999999999996542211 1
Q ss_pred hHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 530 TFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.....++.......+......+.+++..||+.||++||++.|++++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~ 298 (313)
T 3cek_A 248 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298 (313)
T ss_dssp HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHC
T ss_pred HHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccC
Confidence 223334433333333344567899999999999999999999999877544
No 224
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.9e-39 Score=334.80 Aligned_cols=256 Identities=20% Similarity=0.316 Sum_probs=185.5
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecC----CCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR----GRG 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~~~ 381 (589)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|++++++++||||+++++++... ...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 367889999999999999999864 789999999975432 33456788999999999999999999998542 124
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++|+||+ +++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~g-----ivH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSAD-----IIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeeCCCCHhhEEECCCCCEEEeec
Confidence 679999999 78999988642 4899999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH---------
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF--------- 531 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~--------- 531 (589)
|+++..... .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.+...........
T Consensus 177 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 177 GLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred ccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 999875432 223457888999999887 678999999999999999999999997543221111100
Q ss_pred ----------HHhhccccC-CCCC-----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 532 ----------ENFIDRNLK-GKFS-----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 532 ----------~~~~~~~~~-~~~~-----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
..++..... .... ......+.+++.+|++.||++|||+.|++++-+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~ 315 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhh
Confidence 011110000 0000 1124568899999999999999999999988654
No 225
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.5e-39 Score=345.85 Aligned_cols=260 Identities=16% Similarity=0.206 Sum_probs=201.7
Q ss_pred hccCccccccccCCCccEEEEEe-cCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTL-RDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~lv 386 (589)
.++|...+.||+|+||.||+|.. .+++.||||++...... .++..|++++..++|++.+..+.++.. ..+..++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~-~~~~~~lv 81 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGV-EGDYNVLV 81 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEE-ETTEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEe-eCCEEEEE
Confidence 36788899999999999999996 47899999988765422 357889999999987555555444432 34678999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee---cCCCceEEccccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---DQQFNPLIADCGL 463 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---~~~~~~kl~DfGl 463 (589)
|||+ +++|.+++..... .+++..++.|+.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+
T Consensus 82 me~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~g-----IvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSKS-----FLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-----EeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 9999 9999999985432 4999999999999999999999988 9999999999999 6889999999999
Q ss_pred cccccCCcee------eeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 464 HKLLADDIVF------SVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 464 a~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
++.+...... ......+|..|+|||.+.+..++.++|||||||+||||++|+.||........ ...+..+...
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~ 231 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEK 231 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhc
Confidence 9876543221 11245688899999999999999999999999999999999999975321100 0001111111
Q ss_pred ccCCC---CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhc
Q 007788 538 NLKGK---FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAP 581 (589)
Q Consensus 538 ~~~~~---~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~ 581 (589)
..... .....+.++.+++..||+.||++||++.++++.|+.+..
T Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 232 KVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 10000 001224678999999999999999999999999988754
No 226
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=340.42 Aligned_cols=264 Identities=23% Similarity=0.340 Sum_probs=188.5
Q ss_pred ccCcc-ccccccCCCccEEEEEec---CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 309 QCFSE-VNLLGKGNFSSVYKGTLR---DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 309 ~~f~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
+.|.. .++||+|+||.||+|..+ +++.||||++..... ...+.+|+.++++++||||+++++++........+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34554 458999999999999975 578999999975432 23688999999999999999999999776677899
Q ss_pred EEEEeCCCCChHHHhhhhcC-----CCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee----cCCCc
Q 007788 385 LIYDFAPKGKLSKYLDQEEG-----SSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI----DQQFN 455 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill----~~~~~ 455 (589)
+||||+. |+|.+++..... ....+++..++.|+.||+.||+|||+.+ |+||||||+|||+ +.++.
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-----ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-----VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-----EeCCCcCHHHeEEecCCCCCCc
Confidence 9999996 588888764321 1224899999999999999999999988 9999999999999 77899
Q ss_pred eEEccccccccccCCce--eeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHh-----
Q 007788 456 PLIADCGLHKLLADDIV--FSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAE----- 527 (589)
Q Consensus 456 ~kl~DfGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~----- 527 (589)
+||+|||+++....... .......+|+.|+|||++.+. .++.++|||||||++|||+||+.||.........
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 250 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccch
Confidence 99999999987654221 122335678899999999874 5899999999999999999999999643211000
Q ss_pred hhhHHHhhc---------------------------cccCCCCC---------HHHHHHHHHHHHHhcccCCCCCCCHHH
Q 007788 528 SATFENFID---------------------------RNLKGKFS---------ESEAAKLGKMALVCTHEDPENRPTMEA 571 (589)
Q Consensus 528 ~~~~~~~~~---------------------------~~~~~~~~---------~~~~~~l~~l~~~C~~~dp~~RPs~~e 571 (589)
...+..++. ........ ......+.+++..|++.||++|||++|
T Consensus 251 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e 330 (405)
T 3rgf_A 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQ 330 (405)
T ss_dssp HHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHH
T ss_pred HHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 000000000 00000000 001456789999999999999999999
Q ss_pred HHHHHHhhhc
Q 007788 572 VIEELTVAAP 581 (589)
Q Consensus 572 vl~~L~~~~~ 581 (589)
++++-+....
T Consensus 331 ~L~hp~f~~~ 340 (405)
T 3rgf_A 331 AMQDPYFLED 340 (405)
T ss_dssp HHTSGGGTSS
T ss_pred HhcChhhccC
Confidence 9999887553
No 227
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-39 Score=341.14 Aligned_cols=255 Identities=19% Similarity=0.267 Sum_probs=200.8
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC--------CCCccceeeeeecC-
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR--------HENIIRLRGFCCSR- 378 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~~~- 378 (589)
++|...+.||+|+||.||+|+.. +++.||||++... ......+.+|++++++++ |+||+++++++...
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 67889999999999999999865 6899999999743 344567889999999985 78899999988532
Q ss_pred -CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCC--
Q 007788 379 -GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQF-- 454 (589)
Q Consensus 379 -~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~-- 454 (589)
.....++||||+ +++|.+++..... ..+++..++.|+.||+.||+|||+. + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~g-----ivHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKCR-----IIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-----EECCCCSGGGEEECCCHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHeeEeccchh
Confidence 345789999999 6677776654431 3489999999999999999999997 7 99999999999999775
Q ss_pred -----------------------------------------------ceEEccccccccccCCceeeeecCCccccccCc
Q 007788 455 -----------------------------------------------NPLIADCGLHKLLADDIVFSVLKTSAAMGYLAP 487 (589)
Q Consensus 455 -----------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aP 487 (589)
.+||+|||++...... .....+|..|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aP 262 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCC
Confidence 7999999999876543 2234578899999
Q ss_pred ccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHH-----HHhhhhHHHhhc------------------cc------
Q 007788 488 EYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRL-----AAESATFENFID------------------RN------ 538 (589)
Q Consensus 488 E~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~------------------~~------ 538 (589)
|++.+..++.++|||||||++|||+||+.||...... ......+..... ..
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 9999999999999999999999999999999642110 000000000000 00
Q ss_pred -------------cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 539 -------------LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 539 -------------~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
-....+......+.+++.+||+.||++|||++|++++-+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 394 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 394 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGG
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcc
Confidence 001235677888999999999999999999999998755
No 228
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.9e-40 Score=341.87 Aligned_cols=257 Identities=17% Similarity=0.270 Sum_probs=194.8
Q ss_pred ccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCC----CeEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----GECF 384 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----~~~~ 384 (589)
.+|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++..... ...+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 46888899999999999999998777799998865432 12368999999999999999999864322 2378
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-CCCceEEccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-QQFNPLIADCGL 463 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-~~~~~kl~DfGl 463 (589)
+||||++++.+ +.+.........+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+
T Consensus 115 lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-----ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 115 LVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-----ICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 99999987544 433322222345999999999999999999999988 99999999999999 799999999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCC-CCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHH----------
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTG-RFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFE---------- 532 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~---------- 532 (589)
++...... ......+|..|+|||.+.+. .++.++|||||||++|||++|+.||.+............
T Consensus 189 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 189 AKILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp CEECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 98764432 12344578889999998765 589999999999999999999999976432211111100
Q ss_pred HhhccccC--------C-----CCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 533 NFIDRNLK--------G-----KFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 533 ~~~~~~~~--------~-----~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
...++... . ......+..+.+++.+||+.||++|||+.|++++-+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 325 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhh
Confidence 00011100 0 0111245679999999999999999999999988654
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.3e-39 Score=330.30 Aligned_cols=262 Identities=19% Similarity=0.353 Sum_probs=202.1
Q ss_pred hhccCccccccccCCCccEEEEEe--cCCcEEEEEEeccCCCc-hHHHHHHHHHHHHhcc---CCCCccceeeeeec---
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTL--RDGTLVAIRSINVTSCK-SEEAEFVKGLYLLTSL---RHENIIRLRGFCCS--- 377 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~l~~~~~~-~~~~~~~~e~~~l~~l---~H~niv~l~g~~~~--- 377 (589)
+.++|...+.||+|+||.||+|.. .+|+.||||++...... .....+.+|+.+++++ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 36889999999754321 1123456677666655 89999999999852
Q ss_pred CCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceE
Q 007788 378 RGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPL 457 (589)
Q Consensus 378 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~k 457 (589)
......++||||++ |+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~g-----i~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSHR-----VVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCGGGEEECTTCCEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCHHHeEEcCCCCEE
Confidence 13457899999997 699999976542 24899999999999999999999988 99999999999999999999
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR 537 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 537 (589)
|+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||++|+.||..................+
T Consensus 161 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (326)
T 1blx_A 161 LADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLP 238 (326)
T ss_dssp ECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 99999998765332 1223457888999999999999999999999999999999999997643322211111100000
Q ss_pred --------------cc-------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 538 --------------NL-------KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 538 --------------~~-------~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.. ........+..+.+++.+||+.||++|||+.|++++-+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 300 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccc
Confidence 00 001112345678899999999999999999999987543
No 230
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=330.05 Aligned_cols=259 Identities=18% Similarity=0.307 Sum_probs=195.1
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecC---------
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--------- 378 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--------- 378 (589)
++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 57888899999999999999986 58999999997653 44557899999999999999999999987432
Q ss_pred ---CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-CCC
Q 007788 379 ---GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-QQF 454 (589)
Q Consensus 379 ---~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-~~~ 454 (589)
..+..++||||++ |+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++ +++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSAN-----VLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTT-----CBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhCC-----EecCCCCHHHEEEcCCCC
Confidence 2367899999997 6999998642 4889999999999999999999988 99999999999997 567
Q ss_pred ceEEccccccccccCCcee--eeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 455 NPLIADCGLHKLLADDIVF--SVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 455 ~~kl~DfGla~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
.+||+|||+++........ ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||.............
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999999876532211 1123345778999998865 678999999999999999999999997543221111100
Q ss_pred H-----------Hh-------hccccC-CCC-----CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 532 E-----------NF-------IDRNLK-GKF-----SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 532 ~-----------~~-------~~~~~~-~~~-----~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
. ++ +..... ... ....+..+.+++.+|++.||++|||++|++++-+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 310 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHH
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccc
Confidence 0 00 000000 000 112356789999999999999999999999986654
No 231
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.7e-39 Score=329.34 Aligned_cols=253 Identities=21% Similarity=0.296 Sum_probs=196.4
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-------chHHHHHHHHHHHHhccCCCCccceeeeeecCC
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-------KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRG 379 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-------~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~ 379 (589)
.++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 86 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-- 86 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence 357889999999999999999975 689999999875421 1223458899999999999999999999843
Q ss_pred CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc---e
Q 007788 380 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---P 456 (589)
Q Consensus 380 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---~ 456 (589)
+..++||||+++++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +
T Consensus 87 -~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 87 -EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHENG-----IIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp -SSEEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEESSSSSSCCE
T ss_pred -CceEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCCHHHEEEecCCCCCeE
Confidence 34899999999999999987543 4899999999999999999999988 999999999999987664 9
Q ss_pred EEccccccccccCCceeeeecCCccccccCccccc---CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHH
Q 007788 457 LIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFEN 533 (589)
Q Consensus 457 kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 533 (589)
||+|||+++....... .....++..|+|||++. ...++.++||||||+++|||++|+.||....... ....
T Consensus 157 kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~ 230 (322)
T 2ycf_A 157 KITDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV----SLKD 230 (322)
T ss_dssp EECCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS----CHHH
T ss_pred EEccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH----HHHH
Confidence 9999999987654321 11234788899999874 5678999999999999999999999996542211 1111
Q ss_pred hhccccCCCCC---HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 534 FIDRNLKGKFS---ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 534 ~~~~~~~~~~~---~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
.+........+ ...+..+.+++..||+.||++||++.|++++-+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~ 278 (322)
T 2ycf_A 231 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278 (322)
T ss_dssp HHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred HHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCc
Confidence 11111110001 1235678999999999999999999999976543
No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.2e-39 Score=328.02 Aligned_cols=253 Identities=16% Similarity=0.240 Sum_probs=201.3
Q ss_pred ccCccccccccCCCccEEEEEe-c-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC------ccceeeeeecCCC
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTL-R-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN------IIRLRGFCCSRGR 380 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 380 (589)
++|+..+.||+|+||.||+|.. . +++.||||++... ......+.+|++++.+++|++ ++++++++.. .
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~--~ 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH--H 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE--T
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc--C
Confidence 5788889999999999999987 3 6899999999753 334567889999998887654 9999999854 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC--------
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-------- 452 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~-------- 452 (589)
+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-----ivH~Dlkp~Nil~~~~~~~~~~~ 161 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSNK-----LTHTDLKPENILFVQSDYTEAYN 161 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCCGGGEEESCCCEEEEEC
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHCC-----CcCCCCCHHHEEEeccccccccC
Confidence 6899999999 8899999976542 34889999999999999999999988 999999999999987
Q ss_pred -----------CCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchh
Q 007788 453 -----------QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521 (589)
Q Consensus 453 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~ 521 (589)
++.+||+|||+++..... .....+|..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 162 PKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp ----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 678999999999865432 22345788999999999999999999999999999999999999653
Q ss_pred HHHHHhhhhHHHhhc--------------------------------------c-ccCCCCCHHHHHHHHHHHHHhcccC
Q 007788 522 MRLAAESATFENFID--------------------------------------R-NLKGKFSESEAAKLGKMALVCTHED 562 (589)
Q Consensus 522 ~~~~~~~~~~~~~~~--------------------------------------~-~~~~~~~~~~~~~l~~l~~~C~~~d 562 (589)
....... .+..... + .............+.+++..||+.|
T Consensus 238 ~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 316 (339)
T 1z57_A 238 DSKEHLA-MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316 (339)
T ss_dssp CHHHHHH-HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred ChHHHHH-HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence 2211100 0000000 0 0001123355778999999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 007788 563 PENRPTMEAVIEELTV 578 (589)
Q Consensus 563 p~~RPs~~evl~~L~~ 578 (589)
|++|||+.|++++-+.
T Consensus 317 P~~Rpt~~ell~hp~f 332 (339)
T 1z57_A 317 PAKRITLREALKHPFF 332 (339)
T ss_dssp TTTSCCHHHHTTSGGG
T ss_pred cccccCHHHHhcCHHH
Confidence 9999999999987543
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.6e-39 Score=335.06 Aligned_cols=255 Identities=19% Similarity=0.308 Sum_probs=197.3
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCC----
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG---- 381 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~---- 381 (589)
.++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++++++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888899999999999999975 689999999976543 33356788999999999999999999998543221
Q ss_pred eEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccc
Q 007788 382 ECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADC 461 (589)
Q Consensus 382 ~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 461 (589)
..++||||+. ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-----ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSAG-----VVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCC-----CcCCCcCHHHeEECCCCCEEEEec
Confidence 2399999997 688888742 3899999999999999999999988 999999999999999999999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH---------
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF--------- 531 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~--------- 531 (589)
|+++..... .....+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264 (371)
T ss_dssp TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHH
Confidence 999865432 234457889999999887 678999999999999999999999997543221111100
Q ss_pred ----------HHhhccccCCC------CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 532 ----------ENFIDRNLKGK------FSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 532 ----------~~~~~~~~~~~------~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
........... ........+.+++..|++.||++|||++|++++-+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 327 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence 00000000000 011235678999999999999999999999998764
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.7e-39 Score=322.81 Aligned_cols=255 Identities=21% Similarity=0.323 Sum_probs=204.2
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEE
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~ 384 (589)
..++|...+.||+|+||.||+|... +++.||||++..... ......+.+|++++++++||||+++++++.. .+..+
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 97 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED--SSSFY 97 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC--CCeEE
Confidence 3468999999999999999999986 789999999975432 3345679999999999999999999999854 47899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC---CceEEccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ---FNPLIADC 461 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~---~~~kl~Df 461 (589)
+||||+++++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.+ +.+||+||
T Consensus 98 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKHN-----IVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred EEEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeccCCChhhEEEecCCCcccEEEecc
Confidence 9999999999999987654 3899999999999999999999988 9999999999999764 46999999
Q ss_pred cccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC
Q 007788 462 GLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG 541 (589)
Q Consensus 462 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 541 (589)
|++........ .....++..|+|||.+.+ .++.++||||||+++|||++|+.||......... ..+.......
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~ 241 (287)
T 2wei_A 169 GLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----KRVETGKYAF 241 (287)
T ss_dssp TGGGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHCCCCC
T ss_pred CcceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH----HHHHcCCCCC
Confidence 99987654321 112236778999998875 5899999999999999999999999764332111 1111111111
Q ss_pred CC--CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 542 KF--SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 542 ~~--~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
.. ....+..+.+++..|++.||++|||+.|++++-+..
T Consensus 242 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~ 281 (287)
T 2wei_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281 (287)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHH
T ss_pred CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHh
Confidence 11 123456789999999999999999999999876543
No 235
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.6e-39 Score=341.08 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=188.4
Q ss_pred CccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEEEEEe
Q 007788 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLIYDF 389 (589)
Q Consensus 311 f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv~Ey 389 (589)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++. +.+..++||||
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--~~~~~~lv~E~ 90 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSET--TDRFLYIALEL 90 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE--CSSEEEEEECC
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEe--cCCeEEEEEec
Confidence 4446789999999998777778999999998653 234678899999886 8999999999884 45789999999
Q ss_pred CCCCChHHHhhhhcCCCCC---CCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCC-------------
Q 007788 390 APKGKLSKYLDQEEGSSNV---LDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ------------- 453 (589)
Q Consensus 390 ~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~------------- 453 (589)
+. |+|.+++......... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-----IIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-----ccccCCChHhEEEecCcccccccccCCCc
Confidence 95 6999999865432211 133456789999999999999988 9999999999999754
Q ss_pred CceEEccccccccccCCcee---eeecCCccccccCcccccC-------CCCCCcchhhhHHHHHHHHHh-CCCCcchhH
Q 007788 454 FNPLIADCGLHKLLADDIVF---SVLKTSAAMGYLAPEYVTT-------GRFTERSDIFAFGVIILQILT-GSLVLTSSM 522 (589)
Q Consensus 454 ~~~kl~DfGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~ 522 (589)
+.+||+|||+++........ ......+|++|+|||++.+ ..++.++|||||||++|||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999877543211 1223468899999999875 568999999999999999999 899986543
Q ss_pred HHHHhhhhHHHhhc-cccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 523 RLAAESATFENFID-RNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 523 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
... ......... +..........+..+.+++.+||+.||++|||+.|++++-+.
T Consensus 245 ~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f 299 (434)
T 2rio_A 245 SRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299 (434)
T ss_dssp THH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred hhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence 211 111111111 111122245677889999999999999999999999986543
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=328.98 Aligned_cols=254 Identities=19% Similarity=0.320 Sum_probs=197.9
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeeecCCC----Ce
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGR----GE 382 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~----~~ 382 (589)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+|+.++++++||||+++++++..... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999975 689999999976542 3335678999999999999999999999854321 13
Q ss_pred EEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 383 CFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 383 ~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.++||||++ ++|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~~-----ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSAG-----VVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHTT-----CCCSSCCGGGEEECTTCCEEECSTT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEeECCCCcEEEeecc
Confidence 599999997 688887742 3899999999999999999999988 9999999999999999999999999
Q ss_pred ccccccCCceeeeecCCccccccCcccccC-CCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH----------
Q 007788 463 LHKLLADDIVFSVLKTSAAMGYLAPEYVTT-GRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF---------- 531 (589)
Q Consensus 463 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~---------- 531 (589)
+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.+...........
T Consensus 172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247 (353)
T ss_dssp CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHH
T ss_pred cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99865432 223457888999999887 678999999999999999999999997543221111000
Q ss_pred ---------HHhhc---cccC---CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 532 ---------ENFID---RNLK---GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 532 ---------~~~~~---~~~~---~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
...+. .... .......+..+.+++.+|++.||++|||++|++++-+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 309 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence 00000 0000 01123446789999999999999999999999988664
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.2e-39 Score=329.28 Aligned_cols=258 Identities=17% Similarity=0.215 Sum_probs=177.3
Q ss_pred hccCccc-cccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecC--CCCeE
Q 007788 308 TQCFSEV-NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSR--GRGEC 383 (589)
Q Consensus 308 ~~~f~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~~ 383 (589)
.++|... ++||+|+||.||+|... +|+.||||++.... .. ..+....+..++||||+++++++... .....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KA---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 3567774 46999999999999986 68999999986531 11 12223345667999999999988542 23457
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCceEEcc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIAD 460 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 460 (589)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~~-----ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSHN-----IAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHTT-----EECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----eecCCCCHHHEEEEecCCCceEEEec
Confidence 999999999999999986532 35999999999999999999999988 999999999999986 45599999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcc--c
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDR--N 538 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~--~ 538 (589)
||+++...... .....+++.|+|||++.+..++.++||||||+++|||++|+.||...............+... .
T Consensus 175 fg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 251 (336)
T 3fhr_A 175 FGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251 (336)
T ss_dssp CTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------C
T ss_pred cccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccc
Confidence 99998665332 223456888999999988889999999999999999999999997654322111111111111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 539 LKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 539 ~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
.........+..+.+++..|++.||++|||++|++++.+...
T Consensus 252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 111112344667899999999999999999999999877543
No 238
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.2e-39 Score=333.42 Aligned_cols=258 Identities=19% Similarity=0.294 Sum_probs=202.4
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-----------CCCccceeeeee
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-----------HENIIRLRGFCC 376 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~ 376 (589)
++|...+.||+|+||.||+|... +++.||||++... ......+.+|++++.+++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 57888899999999999999974 7899999999753 334567889999998886 899999999986
Q ss_pred cCC--CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeec--
Q 007788 377 SRG--RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLID-- 451 (589)
Q Consensus 377 ~~~--~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~-- 451 (589)
... ....++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~-----ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRCG-----IIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-----EECSCCSGGGEEEEEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcCC-----EEecCCChHHeEEecc
Confidence 532 22689999999 8999999986432 2489999999999999999999997 7 99999999999994
Q ss_pred ----CCCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHH-
Q 007788 452 ----QQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAA- 526 (589)
Q Consensus 452 ----~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~- 526 (589)
..+.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 244 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred CCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC
Confidence 4458999999999876543 2234678899999999999999999999999999999999999974321100
Q ss_pred -hhhhHHHhhc---------------------c-------------------ccCCCCCHHHHHHHHHHHHHhcccCCCC
Q 007788 527 -ESATFENFID---------------------R-------------------NLKGKFSESEAAKLGKMALVCTHEDPEN 565 (589)
Q Consensus 527 -~~~~~~~~~~---------------------~-------------------~~~~~~~~~~~~~l~~l~~~C~~~dp~~ 565 (589)
....+..++. . ......+......+.+++..||+.||++
T Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 0000000000 0 0011345677889999999999999999
Q ss_pred CCCHHHHHHHHHhhh
Q 007788 566 RPTMEAVIEELTVAA 580 (589)
Q Consensus 566 RPs~~evl~~L~~~~ 580 (589)
|||++|++++-+...
T Consensus 325 Rpt~~ell~hp~f~~ 339 (373)
T 1q8y_A 325 RADAGGLVNHPWLKD 339 (373)
T ss_dssp CBCHHHHHTCGGGTT
T ss_pred cCCHHHHhhChhhhc
Confidence 999999999876543
No 239
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-38 Score=329.86 Aligned_cols=258 Identities=18% Similarity=0.255 Sum_probs=200.2
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CC-----CccceeeeeecCC
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HE-----NIIRLRGFCCSRG 379 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~ 379 (589)
..++|...+.||+|+||.||+|... +++.||||+++.. .....++..|++++..++ |+ +|+++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-- 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-- 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE--
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc--
Confidence 3568889999999999999999976 6889999999743 334567788888888885 55 49999998854
Q ss_pred CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec--CCCceE
Q 007788 380 RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID--QQFNPL 457 (589)
Q Consensus 380 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~--~~~~~k 457 (589)
.+..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+.. .+|+||||||+|||++ .++.+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATPE---LSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTSTT---TCEECCCCSGGGEEESSTTSCCEE
T ss_pred CCceEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccCC---CCEEcCCCCcccEEEecCCCCcEE
Confidence 478999999996 599999986542 24899999999999999999999521 2399999999999994 578899
Q ss_pred EccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH------
Q 007788 458 IADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF------ 531 (589)
Q Consensus 458 l~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~------ 531 (589)
|+|||+++..... .....+|+.|+|||++.+..++.++|||||||++|||+||+.||.............
T Consensus 202 L~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~ 277 (382)
T 2vx3_A 202 IVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277 (382)
T ss_dssp ECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSC
T ss_pred EEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999876542 223567888999999999999999999999999999999999997543221111100
Q ss_pred -----------HHhhccccC-----------------------------------------CCCCHHHHHHHHHHHHHhc
Q 007788 532 -----------ENFIDRNLK-----------------------------------------GKFSESEAAKLGKMALVCT 559 (589)
Q Consensus 532 -----------~~~~~~~~~-----------------------------------------~~~~~~~~~~l~~l~~~C~ 559 (589)
..+++.... ......+...+.+++.+||
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 357 (382)
T 2vx3_A 278 PAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRML 357 (382)
T ss_dssp CHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhc
Confidence 001100000 0012234568899999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 007788 560 HEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 560 ~~dp~~RPs~~evl~~L~~ 578 (589)
+.||++|||++|++++-+.
T Consensus 358 ~~dP~~Rpta~e~L~hp~f 376 (382)
T 2vx3_A 358 DYDPKTRIQPYYALQHSFF 376 (382)
T ss_dssp CSCTTTSCCHHHHTTSGGG
T ss_pred CCChhhCCCHHHHhcCccc
Confidence 9999999999999988664
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.8e-39 Score=330.46 Aligned_cols=251 Identities=20% Similarity=0.349 Sum_probs=202.3
Q ss_pred HHHHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCch-----HHHHHHHHHHHHhccC--CCCccceeee
Q 007788 303 EVESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKS-----EEAEFVKGLYLLTSLR--HENIIRLRGF 374 (589)
Q Consensus 303 ~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~-----~~~~~~~e~~~l~~l~--H~niv~l~g~ 374 (589)
+.....++|...+.||+|+||.||+|... +++.||||++....... ....+.+|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445678999999999999999999864 78999999997653221 2245678999999996 5999999999
Q ss_pred eecCCCCeEEEEEEeCCC-CChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-C
Q 007788 375 CCSRGRGECFLIYDFAPK-GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-Q 452 (589)
Q Consensus 375 ~~~~~~~~~~lv~Ey~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-~ 452 (589)
+.. .+..++||||+.+ ++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++ +
T Consensus 117 ~~~--~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~-----ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 117 FER--PDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNCG-----VLHRDIKDENILIDLN 185 (320)
T ss_dssp EEC--SSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEEETT
T ss_pred Eec--CCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCC-----cEeCCCCHHHEEEeCC
Confidence 954 4789999999986 89999998653 3899999999999999999999988 99999999999999 7
Q ss_pred CCceEEccccccccccCCceeeeecCCccccccCcccccCCCC-CCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRF-TERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
++.+||+|||+++...... .....++..|+|||++.+..+ +.++||||||+++|||++|+.||........
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~----- 257 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR----- 257 (320)
T ss_dssp TTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH-----
T ss_pred CCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc-----
Confidence 8999999999998765432 223457888999999887665 6789999999999999999999976432111
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVA 579 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~ 579 (589)
... ......+..+.+++.+||+.||++|||++|++++-+..
T Consensus 258 -----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~ 298 (320)
T 3a99_A 258 -----GQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298 (320)
T ss_dssp -----CCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred -----ccc--cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhc
Confidence 111 11223345788999999999999999999999876543
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=325.23 Aligned_cols=250 Identities=21% Similarity=0.354 Sum_probs=196.8
Q ss_pred HHhhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc-----hHHHHHHHHHHHHhcc----CCCCccceeee
Q 007788 305 ESATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK-----SEEAEFVKGLYLLTSL----RHENIIRLRGF 374 (589)
Q Consensus 305 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~-----~~~~~~~~e~~~l~~l----~H~niv~l~g~ 374 (589)
....++|...+.||+|+||.||+|... +++.||||++...... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 334578999999999999999999874 7899999999755321 1223456788888888 89999999999
Q ss_pred eecCCCCeEEEEEEe-CCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeec-C
Q 007788 375 CCSRGRGECFLIYDF-APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLID-Q 452 (589)
Q Consensus 375 ~~~~~~~~~~lv~Ey-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~-~ 452 (589)
+.. .+..++|||| +.+++|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++ .
T Consensus 107 ~~~--~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~ 175 (312)
T 2iwi_A 107 FET--QEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSRG-----VVHRDIKDENILIDLR 175 (312)
T ss_dssp C-------CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHHT-----EECCCCSGGGEEEETT
T ss_pred Eec--CCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----eeecCCChhhEEEeCC
Confidence 844 4678999999 78999999998754 3899999999999999999999988 99999999999999 8
Q ss_pred CCceEEccccccccccCCceeeeecCCccccccCcccccCCCCC-CcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH
Q 007788 453 QFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFT-ERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF 531 (589)
Q Consensus 453 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~ 531 (589)
++.+||+|||++....... .....++..|+|||++.+..+. .++||||||+++|||++|+.||.......
T Consensus 176 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------ 246 (312)
T 2iwi_A 176 RGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL------ 246 (312)
T ss_dssp TTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH------
T ss_pred CCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh------
Confidence 8999999999998765532 2234578889999998876664 58999999999999999999997543211
Q ss_pred HHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 532 ENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 532 ~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
... ...+......+.+++.+||+.||++|||++|++++-+...
T Consensus 247 ----~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~ 289 (312)
T 2iwi_A 247 ----EAE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289 (312)
T ss_dssp ----HTC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC
T ss_pred ----hhc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcC
Confidence 111 1123334567899999999999999999999998766543
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.6e-38 Score=324.32 Aligned_cols=254 Identities=15% Similarity=0.229 Sum_probs=199.8
Q ss_pred ccCccccccccCCCccEEEEEec-CC-cEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC------ccceeeeeecCCC
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DG-TLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN------IIRLRGFCCSRGR 380 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 380 (589)
++|...+.||+|+||.||+|... ++ +.||||+++.. ......+.+|+.++++++|++ ++.+++++.. .
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--~ 94 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--H 94 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE--T
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee--C
Confidence 57888999999999999999975 34 78999999753 344567888999999997766 8888888854 4
Q ss_pred CeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeee----------
Q 007788 381 GECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLI---------- 450 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill---------- 450 (589)
+..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+|||+
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~-----ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHENQ-----LTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTTT-----EECCCCCGGGEEESCCCEEEEEC
T ss_pred CeEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC-----cccCCCCHHHEEEeccccccccc
Confidence 6899999999 6677777765432 34899999999999999999999988 9999999999999
Q ss_pred ---------cCCCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchh
Q 007788 451 ---------DQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521 (589)
Q Consensus 451 ---------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~ 521 (589)
+.++.+||+|||+++...... ....+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 678899999999998654422 2346788999999999999999999999999999999999999754
Q ss_pred HHHHHhhhhHHHhhc----------------------------------c-----ccCCCCCHHHHHHHHHHHHHhcccC
Q 007788 522 MRLAAESATFENFID----------------------------------R-----NLKGKFSESEAAKLGKMALVCTHED 562 (589)
Q Consensus 522 ~~~~~~~~~~~~~~~----------------------------------~-----~~~~~~~~~~~~~l~~l~~~C~~~d 562 (589)
........ +..... . .............+.+++.+||+.|
T Consensus 243 ~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 243 ENREHLVM-MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp SHHHHHHH-HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHH-HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 32111000 000000 0 0000112344668999999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 007788 563 PENRPTMEAVIEELTVA 579 (589)
Q Consensus 563 p~~RPs~~evl~~L~~~ 579 (589)
|++|||++|++++-+..
T Consensus 322 P~~Rpt~~e~l~hp~f~ 338 (355)
T 2eu9_A 322 PAQRITLAEALLHPFFA 338 (355)
T ss_dssp TTTSCCHHHHTTSGGGG
T ss_pred hhhCcCHHHHhcChhhc
Confidence 99999999999886644
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=322.66 Aligned_cols=255 Identities=16% Similarity=0.305 Sum_probs=181.7
Q ss_pred hccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHH-HHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAE-FVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~-~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
.++|+..+.||+|+||.||+|... +|+.||||++..........+ +.++..+++.++||||+++++++.. .+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT--NTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--CCcEEE
Confidence 357888899999999999999986 789999999987654333333 4445567888899999999999854 468999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCC-CCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSS-EVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
||||+ ++.+..+..... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 102 v~e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~-----i~H~dlkp~Nil~~~~~~~kl~dfg~~ 172 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKHG-----VIHRDVKPSNILLDERGQIKLCDFGIS 172 (318)
T ss_dssp EECCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhCC-----EEeCCCCHHHEEECCCCCEEEEECCCc
Confidence 99999 555555554332 2489999999999999999999985 7 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCccccc-----CCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhcccc
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVT-----TGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNL 539 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 539 (589)
........ .....++..|+|||.+. ...++.++||||||+++|||++|+.||........ ..........
T Consensus 173 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 247 (318)
T 2dyl_A 173 GRLVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE---VLTKVLQEEP 247 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHHSCC
T ss_pred hhccCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH---HHHHHhccCC
Confidence 76644321 22345788899999984 45688999999999999999999999965321111 1111111111
Q ss_pred C-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 007788 540 K-GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELTV 578 (589)
Q Consensus 540 ~-~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~ 578 (589)
. .......+..+.+++..||+.||.+||+++|++++-+.
T Consensus 248 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (318)
T 2dyl_A 248 PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287 (318)
T ss_dssp CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence 0 11112245678999999999999999999999987553
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=332.91 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=187.2
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEEEE
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECFLI 386 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~lv 386 (589)
..+|...+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +|||||++++++.+ .+..++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~--~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKD--RQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEec--CCEEEEE
Confidence 4567888999999999976665668999999999754322 356799999999 79999999998854 4788999
Q ss_pred EEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC-----CCceEEccc
Q 007788 387 YDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ-----QFNPLIADC 461 (589)
Q Consensus 387 ~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Df 461 (589)
|||++ |+|.+++...... +.+..++.++.||+.||+|||+.+ |+||||||+|||++. ...+||+||
T Consensus 97 ~E~~~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~-----ivHrDlKp~NIll~~~~~~~~~~~kL~DF 167 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSLN-----IVHRDLKPHNILISMPNAHGKIKAMISDF 167 (432)
T ss_dssp EECCS-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHTT-----CCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred EECCC-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHCc-----CEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence 99996 6999999865432 444456789999999999999988 999999999999943 346789999
Q ss_pred cccccccCCce--eeeecCCccccccCccccc---CCCCCCcchhhhHHHHHHHHHh-CCCCcchhHHHHHhhhhHHHhh
Q 007788 462 GLHKLLADDIV--FSVLKTSAAMGYLAPEYVT---TGRFTERSDIFAFGVIILQILT-GSLVLTSSMRLAAESATFENFI 535 (589)
Q Consensus 462 Gla~~~~~~~~--~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 535 (589)
|+++....... .......+|++|+|||++. ...++.++|||||||++|||+| |..||........ ....
T Consensus 168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-----~~~~ 242 (432)
T 3p23_A 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-----NILL 242 (432)
T ss_dssp TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-----HHHT
T ss_pred cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-----HHHh
Confidence 99987653321 1223456899999999997 4567889999999999999999 8888864422111 1111
Q ss_pred cc-ccC-CCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 007788 536 DR-NLK-GKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEELT 577 (589)
Q Consensus 536 ~~-~~~-~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~ 577 (589)
.. ... ..........+.+++..||+.||++|||+.|++++-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~ 286 (432)
T 3p23_A 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286 (432)
T ss_dssp TCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTT
T ss_pred ccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCcc
Confidence 11 011 1112345666889999999999999999999997644
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5e-38 Score=343.11 Aligned_cols=257 Identities=21% Similarity=0.291 Sum_probs=201.0
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeec----CCCCeE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCS----RGRGEC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~~ 383 (589)
++|...+.||+|+||.||+|... +|+.||||++...........|.+|++++++++||||+++++++.. ...+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 67889999999999999999975 6899999999876555566789999999999999999999998743 124677
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCc---eEEcc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFN---PLIAD 460 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 460 (589)
++||||+++|+|.+++..... ...+++..++.|+.|++.||+|||+.+ |+||||||+||+++.++. +||+|
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~g-----IVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHENR-----IIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHTT-----BCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred EEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCHHHeEeecCCCceeEEEcc
Confidence 999999999999999986542 234888999999999999999999988 999999999999997765 89999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhH------HHh
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATF------ENF 534 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~------~~~ 534 (589)
||++........ .....++..|+|||.+.+..++.++||||||+++|||++|+.||........+.... ...
T Consensus 168 FG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 168 LGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp CCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred cccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence 999987754432 223467889999999999999999999999999999999999996542222111100 000
Q ss_pred hcccc------------CCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 007788 535 IDRNL------------KGKFSESEAAKLGKMALVCTHEDPENRPTMEAVI 573 (589)
Q Consensus 535 ~~~~~------------~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl 573 (589)
..... ........+..+.+++..|++.||++|||+.|++
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00000 1123445678899999999999999999998854
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-37 Score=310.98 Aligned_cols=232 Identities=11% Similarity=0.090 Sum_probs=182.4
Q ss_pred ccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
++|...+.||+|+||.||+|... +++.||||++..... ......|.+|+..+.+++||||+++++++.. .+..++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--~~~~~l 108 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT--RAGGLV 108 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE--CCcEEE
Confidence 56888899999999999999986 589999999986543 2334789999999999999999999999854 478999
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++... ....+..+|+.|++.||+|||+.+ |+||||||+|||++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~g-----ivH~Dikp~NIll~~~g~~kl~~~~--- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRAG-----VALSIDHPSRVRVSIDGDVVLAYPA--- 174 (286)
T ss_dssp EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSGGGEEEETTSCEEECSCC---
T ss_pred EEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCC-----CccCCCCcccEEEcCCCCEEEEecc---
Confidence 99999999999999532 345568899999999999999998 9999999999999999999998543
Q ss_pred cccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCC--CC
Q 007788 466 LLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKG--KF 543 (589)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 543 (589)
|++ .++.++|||||||++|||+||+.||............ ...+...... ..
T Consensus 175 ------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~~~~~~~~~~~~~~ 228 (286)
T 3uqc_A 175 ------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-ERDTAGQPIEPADI 228 (286)
T ss_dssp ------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-CBCTTSCBCCHHHH
T ss_pred ------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-HHHhccCCCChhhc
Confidence 443 3688999999999999999999999754321100000 0000000000 01
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhhccc
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAAPVM 583 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~~~~ 583 (589)
....+..+.+++.+||+.||++| |+.|+++.|+.+....
T Consensus 229 ~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 229 DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 12235678999999999999999 9999999999877553
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-37 Score=346.02 Aligned_cols=240 Identities=18% Similarity=0.244 Sum_probs=192.0
Q ss_pred ccCccccccccCCCccEEEEEec--CCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeeeeecCCCC---eE
Q 007788 309 QCFSEVNLLGKGNFSSVYKGTLR--DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRG---EC 383 (589)
Q Consensus 309 ~~f~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~---~~ 383 (589)
++|.+.+.||+|+||.||+|.+. +|+.||||++...........|.+|++++.+++||||+++++++...... ..
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67888999999999999999975 68999999997655445567899999999999999999999998654321 26
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGL 463 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGl 463 (589)
++||||+++++|.+++.. .++|..++.|+.||+.||+|||+.+ |+||||||+|||++.+ .+||+|||+
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~g-----iiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSIG-----LVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEECSS-CEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC-----CeecccChHHeEEeCC-cEEEEeccc
Confidence 999999999999987753 3899999999999999999999988 9999999999999986 899999999
Q ss_pred cccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCC
Q 007788 464 HKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKF 543 (589)
Q Consensus 464 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (589)
++..... ....+|++|+|||++.++ ++.++|||||||++|||++|..|+...... .......
T Consensus 228 a~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~~~~~~ 289 (681)
T 2pzi_A 228 VSRINSF-----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD------------GLPEDDP 289 (681)
T ss_dssp CEETTCC-----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS------------SCCTTCH
T ss_pred chhcccC-----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc------------ccccccc
Confidence 9876543 234588999999998765 488999999999999999998887542110 0000001
Q ss_pred CHHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHh
Q 007788 544 SESEAAKLGKMALVCTHEDPENRPT-MEAVIEELTV 578 (589)
Q Consensus 544 ~~~~~~~l~~l~~~C~~~dp~~RPs-~~evl~~L~~ 578 (589)
.......+.+++.+||+.||++||+ ++++...|..
T Consensus 290 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 290 VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 1223467889999999999999995 5555555543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.3e-37 Score=307.28 Aligned_cols=234 Identities=17% Similarity=0.245 Sum_probs=181.2
Q ss_pred ccCccc-cccccCCCccEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHH-hccCCCCccceeeeeec--CCCCeE
Q 007788 309 QCFSEV-NLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLL-TSLRHENIIRLRGFCCS--RGRGEC 383 (589)
Q Consensus 309 ~~f~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~--~~~~~~ 383 (589)
++|... +.||+|+||.||+|... +++.||||++... ..+.+|+.++ +..+||||+++++++.. ......
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 445555 78999999999999974 7899999998642 3567788887 55689999999998854 224578
Q ss_pred EEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecC---CCceEEcc
Q 007788 384 FLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQ---QFNPLIAD 460 (589)
Q Consensus 384 ~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~---~~~~kl~D 460 (589)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~-----i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSIN-----IAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHTT-----EECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC-----cccCCCCHHHEEEecCCCCCcEEEec
Confidence 999999999999999987532 35999999999999999999999988 999999999999998 78999999
Q ss_pred ccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccC
Q 007788 461 CGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSSMRLAAESATFENFIDRNLK 540 (589)
Q Consensus 461 fGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 540 (589)
||++.... +..++.++|||||||++|||+||+.||....................
T Consensus 164 fg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-- 218 (299)
T 3m2w_A 164 FGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ-- 218 (299)
T ss_dssp CTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--
T ss_pred cccccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--
Confidence 99886432 23467899999999999999999999975433211110000000000
Q ss_pred CCCC----HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhh
Q 007788 541 GKFS----ESEAAKLGKMALVCTHEDPENRPTMEAVIEELTVAA 580 (589)
Q Consensus 541 ~~~~----~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~L~~~~ 580 (589)
...+ ...+..+.+++..||+.||++|||+.|++++.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence 0111 123567999999999999999999999999877543
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-37 Score=326.16 Aligned_cols=248 Identities=15% Similarity=0.137 Sum_probs=183.8
Q ss_pred hhccCccccccccCCCccEEEEEec-CCcEEEEEEeccCCCc--hHHHHHHHHHHHHhccCC-CCccceeee--------
Q 007788 307 ATQCFSEVNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSCK--SEEAEFVKGLYLLTSLRH-ENIIRLRGF-------- 374 (589)
Q Consensus 307 ~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~~--~~~~~~~~e~~~l~~l~H-~niv~l~g~-------- 374 (589)
.+..|...+.||+|+||.||+|.+. +|+.||||++...... ...+.|.+|+.++..++| +|...+..+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 3445777789999999999999964 7999999998844322 224679999999999987 322221111
Q ss_pred -------------eecCC---CCeEEEEEEeCCCCChHHHhhhh---cCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCC
Q 007788 375 -------------CCSRG---RGECFLIYDFAPKGKLSKYLDQE---EGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNK 435 (589)
Q Consensus 375 -------------~~~~~---~~~~~lv~Ey~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ 435 (589)
+.... ....+++|+++ +++|.+++... ......++|..++.|+.||+.||+|||+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--- 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--- 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence 11100 12356677765 68999988532 122335888999999999999999999988
Q ss_pred CCeEecCCCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccc----------cCCCCCCcchhhhHH
Q 007788 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYV----------TTGRFTERSDIFAFG 505 (589)
Q Consensus 436 ~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~s~G 505 (589)
|+||||||+|||++.++.+||+|||+++..... .....+ +.|+|||++ .+..++.++||||||
T Consensus 232 --iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 232 --LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp --EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred --cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 999999999999999999999999998865543 233445 889999999 556688999999999
Q ss_pred HHHHHHHhCCCCcchhHHHHHhhhhHHHhhccccCCCCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 007788 506 VIILQILTGSLVLTSSMRLAAESATFENFIDRNLKGKFSESEAAKLGKMALVCTHEDPENRPTMEAVIEE 575 (589)
Q Consensus 506 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~C~~~dp~~RPs~~evl~~ 575 (589)
|++|||+||+.||........ ....+.. .. ..+..+.+++..||+.||++||++.|++++
T Consensus 305 vil~elltg~~Pf~~~~~~~~----~~~~~~~--~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 305 LAIYWIWCADLPNTDDAALGG----SEWIFRS--CK----NIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHHHHSSCCCCTTGGGSC----SGGGGSS--CC----CCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHCCCCCCCcchhhh----HHHHHhh--cc----cCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999999999976533211 1111111 01 224679999999999999999998888765
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.2e-35 Score=304.43 Aligned_cols=244 Identities=16% Similarity=0.203 Sum_probs=186.3
Q ss_pred hccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-------chHHHHHHHHHHHHhccC---------CCCccce
Q 007788 308 TQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-------KSEEAEFVKGLYLLTSLR---------HENIIRL 371 (589)
Q Consensus 308 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~e~~~l~~l~---------H~niv~l 371 (589)
.++|...+.||+|+||.||+|+. +|+.||||++..... ......+.+|++++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45678889999999999999998 689999999986532 223367889999988886 6666666
Q ss_pred eeeeecC----------------------------CCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHH
Q 007788 372 RGFCCSR----------------------------GRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAK 423 (589)
Q Consensus 372 ~g~~~~~----------------------------~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 423 (589)
.+.+... +.+..++||||+++|++.+.+.. ..+++..+..|+.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 6553211 25689999999999977766643 23899999999999999
Q ss_pred HhHHhc-CCCCCCCCeEecCCCCCCeeecCCC--------------------ceEEccccccccccCCceeeeecCCccc
Q 007788 424 GIGYLH-SSEVNKPAIVHRNLSVEKVLIDQQF--------------------NPLIADCGLHKLLADDIVFSVLKTSAAM 482 (589)
Q Consensus 424 ~L~~LH-~~~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~ 482 (589)
||+||| +.+ |+||||||+|||++.++ .+||+|||+++...... ..+|.
T Consensus 173 aL~~lH~~~~-----ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~------~~gt~ 241 (336)
T 2vuw_A 173 SLAVAEASLR-----FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGI------VVFCD 241 (336)
T ss_dssp HHHHHHHHHC-----CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTE------EECCC
T ss_pred HHHHHHHhCC-----EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCc------EEEee
Confidence 999999 887 99999999999999887 89999999998765432 25788
Q ss_pred cccCcccccCCCCCCcchhhhHHHH-HHHHHhCCCCcchhHHHHHhhhhHHHhhcc-cc----CCCCCHHHHHHHHHHHH
Q 007788 483 GYLAPEYVTTGRFTERSDIFAFGVI-ILQILTGSLVLTSSMRLAAESATFENFIDR-NL----KGKFSESEAAKLGKMAL 556 (589)
Q Consensus 483 ~y~aPE~~~~~~~~~~~Dv~s~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~l~~l~~ 556 (589)
.|+|||++.+.. +.++||||+|++ .+++++|..||........ ....+... .. ........+..+.+++.
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~ 317 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHY---LTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHR 317 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHH---HHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhH---HHHhhhhhhccCcccchhhhhhcCHHHHHHHH
Confidence 899999998766 889999998777 7788999999864311000 11111111 01 11113457888999999
Q ss_pred HhcccCCCCCCCHHHHH-HHHH
Q 007788 557 VCTHEDPENRPTMEAVI-EELT 577 (589)
Q Consensus 557 ~C~~~dp~~RPs~~evl-~~L~ 577 (589)
+|++.| |++|++ ++-+
T Consensus 318 ~~L~~d-----sa~e~l~~Hp~ 334 (336)
T 2vuw_A 318 TMLNFS-----SATDLLCQHSL 334 (336)
T ss_dssp HGGGSS-----SHHHHHHHCGG
T ss_pred HHhccC-----CHHHHHhcCCC
Confidence 999976 999998 6643
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.5e-29 Score=275.68 Aligned_cols=187 Identities=12% Similarity=0.012 Sum_probs=128.0
Q ss_pred ccccCCCccEEEEE-ecCCcEEEEEEeccCCC---------chHHHHHHHHHHHHhcc-CCCCccceeeeeecCCCCeEE
Q 007788 316 LLGKGNFSSVYKGT-LRDGTLVAIRSINVTSC---------KSEEAEFVKGLYLLTSL-RHENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 316 ~lg~G~~g~Vy~~~-~~~~~~vavK~l~~~~~---------~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~~~ 384 (589)
..+.|+.|.++.++ .-.|+.++||++..... ....++|.+|+++|+++ .|+||+++++++. +.+..|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e--d~~~~y 318 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE--NAQSGW 318 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE--CSSEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--ECCEEE
Confidence 35666666666554 23588999999975421 12235799999999999 6999999999984 457899
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccc
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLH 464 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla 464 (589)
|||||++|++|.++|.... +++.. +|+.||+.||+|+|+.+ ||||||||+|||+++++.+||+|||+|
T Consensus 319 LVMEyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH~~G-----IIHRDIKPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 319 LVMEKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALEKQG-----FWHDDVRPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp EEEECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHHHTT-----CEESCCCGGGEEECTTSCEEECCCTTE
T ss_pred EEEecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHHHCC-----ceeccCchHhEEECCCCCEEEeecccC
Confidence 9999999999999997653 35543 58999999999999998 999999999999999999999999999
Q ss_pred ccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCc
Q 007788 465 KLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVL 518 (589)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~ 518 (589)
+....... ......||++|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 387 r~~~~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 387 VTTPQDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ESCC---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred eeCCCCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 87654322 1223458899999999875 5677899999999998887665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.6e-26 Score=250.41 Aligned_cols=184 Identities=14% Similarity=0.148 Sum_probs=142.3
Q ss_pred cccccccCCCccEEEEEecCCcEEEEEEeccCCCc-h------HHHHHHHHHHHHhccCCCCccceeeeeecCCCCeEEE
Q 007788 313 EVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-S------EEAEFVKGLYLLTSLRHENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 313 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-~------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~~~l 385 (589)
..+.||+|+||.||+|.. .++.+++|+....... . ..+.|.+|++++++++||||+++..++... +..++
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~~~l 416 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL--DNKRI 416 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET--TTTEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC--CccEE
Confidence 357899999999999955 4778888886543321 1 134589999999999999999666666533 45699
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
||||+++++|.+++.. ++.++.|+++||+|||+.+ |+||||||+|||+++ .+||+|||+++
T Consensus 417 VmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~g-----IiHrDiKp~NILl~~--~~kL~DFGla~ 477 (540)
T 3en9_A 417 MMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKND-----VIHNDLTTSNFIFDK--DLYIIDFGLGK 477 (540)
T ss_dssp EEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTT-----EECTTCCTTSEEESS--SEEECCCTTCE
T ss_pred EEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCc-----CccCCCCHHHEEECC--eEEEEECccCE
Confidence 9999999999999975 4579999999999999988 999999999999999 99999999999
Q ss_pred cccCCceee------eecCCccccccCcccccC--CCCCCcchhhhHHHHHHHHHhCCCCc
Q 007788 466 LLADDIVFS------VLKTSAAMGYLAPEYVTT--GRFTERSDIFAFGVIILQILTGSLVL 518 (589)
Q Consensus 466 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvvl~elltg~~p~ 518 (589)
......... .....+|+.|+|||++.. ..|+..+|+|+..+-.++-+.++.+|
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 875432111 123457889999999987 56888899999998888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.7e-23 Score=207.95 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=123.0
Q ss_pred HHHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCc-----------------hHHHHHHHHHHHHhcc
Q 007788 301 LEEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCK-----------------SEEAEFVKGLYLLTSL 363 (589)
Q Consensus 301 ~~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~-----------------~~~~~~~~e~~~l~~l 363 (589)
+..+......|...+.||+|+||.||+|...+|+.||||.++..... .....+.+|+.+++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455556677778999999999999999978999999999653211 1345789999999999
Q ss_pred CCCCccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCC
Q 007788 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNL 443 (589)
Q Consensus 364 ~H~niv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dl 443 (589)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||+|||+.+ |+||||
T Consensus 162 ~--~-~~v~~~~~~---~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~g-----iiHrDl 219 (282)
T 1zar_A 162 Q--G-LAVPKVYAW---EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHRG-----IVHGDL 219 (282)
T ss_dssp T--T-SSSCCEEEE---ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHTT-----EECSCC
T ss_pred c--C-CCcCeEEec---cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHCC-----CEeCCC
Confidence 9 5 666665532 45699999999999998 421 123469999999999999988 999999
Q ss_pred CCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccC
Q 007788 444 SVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTT 492 (589)
Q Consensus 444 k~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 492 (589)
||+|||++ ++.+||+|||+++.. ..|+|||++..
T Consensus 220 kp~NILl~-~~~vkl~DFG~a~~~--------------~~~~a~e~l~r 253 (282)
T 1zar_A 220 SQYNVLVS-EEGIWIIDFPQSVEV--------------GEEGWREILER 253 (282)
T ss_dssp STTSEEEE-TTEEEECCCTTCEET--------------TSTTHHHHHHH
T ss_pred CHHHEEEE-CCcEEEEECCCCeEC--------------CCCCHHHHHHH
Confidence 99999999 999999999998643 23788998743
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=3.9e-19 Score=174.28 Aligned_cols=146 Identities=14% Similarity=0.146 Sum_probs=109.1
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEe-cCCcE--EEEEEeccCCCc-----------------------hHHHHHHH
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTL-RDGTL--VAIRSINVTSCK-----------------------SEEAEFVK 355 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~l~~~~~~-----------------------~~~~~~~~ 355 (589)
..+.....-|...+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+
T Consensus 40 ~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (258)
T 1zth_A 40 YKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEK 119 (258)
T ss_dssp HHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHH
T ss_pred HHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHH
Confidence 33333333456778999999999999998 68989 999997643211 11236889
Q ss_pred HHHHHhccCCCCc--cceeeeeecCCCCeEEEEEEeCCC-C----ChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHh
Q 007788 356 GLYLLTSLRHENI--IRLRGFCCSRGRGECFLIYDFAPK-G----KLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYL 428 (589)
Q Consensus 356 e~~~l~~l~H~ni--v~l~g~~~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~L 428 (589)
|++.+.++.|+++ ..++++ +..++||||+.+ | +|.++... .++.....++.|++.||+||
T Consensus 120 E~~~l~~l~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 120 EFRNLERAKEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHH
Confidence 9999999988864 333332 245899999942 4 66665432 12345678999999999999
Q ss_pred c-CCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 429 H-SSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 429 H-~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
| +.+ |+||||||.|||+++ .++|+|||+|...
T Consensus 187 H~~~g-----ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-----LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-----EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-----EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 887 999999999999998 9999999998754
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.75 E-value=9.3e-19 Score=198.47 Aligned_cols=113 Identities=41% Similarity=0.672 Sum_probs=104.9
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|++|+|++|+|+|.+|..|++|++|+.|+|++|+|+|.+|.+|++|++|+.|||++|+|+|.+|..+..+++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcccCchh--HhhccCCccccCCCCCCCCCC
Q 007788 119 VQNNTLSGIVPSA--LKRLNGGFQFQNNPGLCGDGI 152 (589)
Q Consensus 119 l~~N~l~g~~p~~--~~~~~~~~~~~~n~~~c~~~~ 152 (589)
|++|+|+|.+|.. +..+. ...+.+||++||.++
T Consensus 711 ls~N~l~g~iP~~~~~~~~~-~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFP-PAKFLNNPGLCGYPL 745 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSC-GGGGCSCTEEESTTS
T ss_pred CcCCcccccCCCchhhccCC-HHHhcCCchhcCCCC
Confidence 9999999999975 33333 357889999999753
No 256
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.70 E-value=1.1e-17 Score=159.89 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=118.8
Q ss_pred cccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeecc
Q 007788 17 IVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLS 96 (589)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls 96 (589)
..++...|.|...... ..+..+++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 35 ~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 35 AELRLNNNEFTVLEAT-GIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp SEEECCSSCCCEECCC-CCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CEEEcCCCcCCccCch-hhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 3445555555433211 234459999999999999998888899999999999999999998888889999999999999
Q ss_pred CccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCccc
Q 007788 97 FNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRAC 158 (589)
Q Consensus 97 ~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~ 158 (589)
+|+|++..|..|..+++|+.|+|++|+|++..|..+..+.. .+.+.+|++.|+|.+..+..+
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~ 177 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEW 177 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHH
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHH
Confidence 99999988999999999999999999999998988887654 467899999999987765543
No 257
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.69 E-value=2.3e-17 Score=157.55 Aligned_cols=142 Identities=21% Similarity=0.195 Sum_probs=117.0
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... .+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 110 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPG--AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLL 110 (220)
T ss_dssp TCCEEECCSSCCCEECTT--SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCcCCCcCHh--HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEE
Confidence 444455555555432221 234489999999999999988899999999999999999999965555679999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCccc
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRAC 158 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~ 158 (589)
|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+.. .+.+.+|++.|+|.+.++..+
T Consensus 111 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~ 176 (220)
T 2v9t_B 111 LNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADY 176 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred CCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHH
Confidence 9999999988999999999999999999999988877776653 567899999999988776544
No 258
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=5.2e-17 Score=151.69 Aligned_cols=120 Identities=25% Similarity=0.328 Sum_probs=107.4
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
.++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..|.+|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 30 ~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 30 PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 357999999999999 8899999999999999999999988888999999999999999999988888999999999999
Q ss_pred ccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCcccc
Q 007788 119 VQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRACT 159 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~~ 159 (589)
|++|+|++..+..+..+.. .+.+.+|+|.|+|.+.++..+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~ 151 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWV 151 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHH
Confidence 9999999877777766643 5678999999999887766544
No 259
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=6e-17 Score=165.14 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=101.0
Q ss_pred HHHHHhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCC-------------chHHHHHHHHHHHHhccCCCCc
Q 007788 302 EEVESATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSC-------------KSEEAEFVKGLYLLTSLRHENI 368 (589)
Q Consensus 302 ~~l~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~-------------~~~~~~~~~e~~~l~~l~H~ni 368 (589)
..+.....-|++.+.||+|++|.||+|...+|+.||||+++.... ......+..+.++.....|+|+
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 333333344888999999999999999999999999999864211 0011122233333333334444
Q ss_pred cceeeeeecCC----CCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCC
Q 007788 369 IRLRGFCCSRG----RGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLS 444 (589)
Q Consensus 369 v~l~g~~~~~~----~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk 444 (589)
++++....... ....++||||+++++|.++... .....++.|++.+|.|||+.+ |||||||
T Consensus 168 ~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~g-----IVHrDLK 232 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKHG-----LIHGDFN 232 (397)
T ss_dssp HHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHTT-----EECSCCS
T ss_pred HHHHhcCCCCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHCC-----CcCCCCC
Confidence 44332111000 0123699999999888665421 123468899999999999988 9999999
Q ss_pred CCCeeecCCC----------ceEEccccccccc
Q 007788 445 VEKVLIDQQF----------NPLIADCGLHKLL 467 (589)
Q Consensus 445 ~~Nill~~~~----------~~kl~DfGla~~~ 467 (589)
|.|||+++++ .+.|+||+-+...
T Consensus 233 p~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 233 EFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999998876 3899999976543
No 260
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.64 E-value=5.5e-16 Score=148.97 Aligned_cols=134 Identities=25% Similarity=0.235 Sum_probs=108.3
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... .+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 41 ~L~~L~Ls~n~i~~~~~~--~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPG--VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp TCSEEECCSSCCCCCCTT--TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEEcCCCccCccCHH--HhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 344445555555433221 234489999999999999866556789999999999999999977677789999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+.. .+.+.+|++.|+|.
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999 88999999999999999999999877776766543 46788999999985
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=1.6e-16 Score=148.25 Aligned_cols=117 Identities=24% Similarity=0.324 Sum_probs=104.3
Q ss_pred ccceEEEccCcccccCCCc-cccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 40 LCFVVLQLCCNQLTGNIPA-QIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
.+|+.|+|++|+|++..|. .|+.+++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3799999999999977664 489999999999999999998899999999999999999999988888899999999999
Q ss_pred ccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCc
Q 007788 119 VQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLR 156 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~ 156 (589)
|++|+|++.+|..+..+.. .+.+.+|++.|+|.+..+.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~ 148 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA 148 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH
Confidence 9999999999988877654 4678899999999876544
No 262
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.62 E-value=8.3e-16 Score=149.87 Aligned_cols=121 Identities=26% Similarity=0.214 Sum_probs=95.5
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.
T Consensus 80 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 159 (251)
T 3m19_A 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159 (251)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCE
Confidence 34788888888888888766677888888888888888888666666788888999999999988666667888889999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCC-CCCccCcc
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCG-DGIASLRA 157 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~-~~~~~l~~ 157 (589)
|+|++|+|++..|..+..+.. .+.+.+|++.|. |.+..+..
T Consensus 160 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~ 203 (251)
T 3m19_A 160 LSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQ 203 (251)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHH
T ss_pred EECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHH
Confidence 999999998877777766543 467889999998 66554443
No 263
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.61 E-value=6.9e-16 Score=155.67 Aligned_cols=111 Identities=31% Similarity=0.445 Sum_probs=96.6
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+. |+.|+|++|++++.+|..|+.+++|+.|+|++|++++.+|. +..+++|++|+|++|+|+|.+|..+..+++|+.|+
T Consensus 197 l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 274 (313)
T 1ogq_A 197 LN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274 (313)
T ss_dssp CC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEE
T ss_pred Cc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEE
Confidence 55 99999999999988899999999999999999999977665 88899999999999999999999999999999999
Q ss_pred ccCCcCcccCchhHhhcc--CCccccCCCCCCCCCC
Q 007788 119 VQNNTLSGIVPSALKRLN--GGFQFQNNPGLCGDGI 152 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~--~~~~~~~n~~~c~~~~ 152 (589)
|++|+++|.+|.. ..+. ..+.+.+|+++||.++
T Consensus 275 Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 275 VSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTTS
T ss_pred CcCCcccccCCCC-ccccccChHHhcCCCCccCCCC
Confidence 9999999999976 3333 2467889999998644
No 264
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.61 E-value=1e-15 Score=152.60 Aligned_cols=121 Identities=27% Similarity=0.249 Sum_probs=96.7
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|
T Consensus 98 ~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 177 (290)
T 1p9a_G 98 TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTL 177 (290)
T ss_dssp TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEE
Confidence 47888999999999987767788889999999999999987666677888999999999999985555567788999999
Q ss_pred eccCCcCcccCchhHhhcc--CCccccCCCCCCCCCCccCcccc
Q 007788 118 DVQNNTLSGIVPSALKRLN--GGFQFQNNPGLCGDGIASLRACT 159 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~--~~~~~~~n~~~c~~~~~~l~~~~ 159 (589)
+|++|+|+ .+|..+.... ..+.+.+|||.|+|.+..+..+.
T Consensus 178 ~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~~~l~~wl 220 (290)
T 1p9a_G 178 LLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEILYFRRWL 220 (290)
T ss_dssp ECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGGHHHHHHH
T ss_pred ECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCccHHHHHHH
Confidence 99999998 5666655443 24578899999999876665443
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.60 E-value=1.6e-15 Score=171.80 Aligned_cols=83 Identities=31% Similarity=0.507 Sum_probs=70.7
Q ss_pred CCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--Cc
Q 007788 62 SLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GF 139 (589)
Q Consensus 62 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~ 139 (589)
.+++|+.|||++|+|+|.+|.+|++|++|+.|+|++|+|+|.+|..++++++|+.|||++|+|+|.+|..+..+.. .+
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 3567888999999999999999999999999999999999999999999999999999999999999988887754 34
Q ss_pred cccCC
Q 007788 140 QFQNN 144 (589)
Q Consensus 140 ~~~~n 144 (589)
.+.+|
T Consensus 710 ~ls~N 714 (768)
T 3rgz_A 710 DLSNN 714 (768)
T ss_dssp ECCSS
T ss_pred ECcCC
Confidence 55555
No 266
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.58 E-value=4.6e-15 Score=140.21 Aligned_cols=135 Identities=21% Similarity=0.181 Sum_probs=107.7
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... .+..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|+++++|+.|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNG--VFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp TCSEEECCSSCCCCCCTT--TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcEEEcCCCccCcCChh--hhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 344455555555422221 234589999999999999976666789999999999999999976666789999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|++|+|++..+..+..+++|+.|+|++|++++..+..+..+.. .+.+.+|++.|.++
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999999777777899999999999999999877766665543 46788999998874
No 267
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.58 E-value=6.1e-15 Score=145.55 Aligned_cols=114 Identities=26% Similarity=0.281 Sum_probs=77.8
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|+++++|+.|+|++|+|++..|..+..+++|+.|
T Consensus 107 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 186 (272)
T 3rfs_A 107 KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDL 186 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEE
Confidence 36777777777777776655666777777777777777776555556777777777777777776665566777777777
Q ss_pred eccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 118 DVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
+|++|++++..|..+..+.. .+.+.+|++.|.|+
T Consensus 187 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 187 RLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 77777777766655554433 35566777777654
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.58 E-value=2.1e-15 Score=140.65 Aligned_cols=115 Identities=23% Similarity=0.175 Sum_probs=98.5
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... ..+..+++|+.|+|++|+|++.+|..|+.+++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 30 ~l~~L~l~~n~i~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSD-GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TCSEEECCSCCCCSBCCS-CSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccCCc-cccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 444555555555433221 1244599999999999999999999999999999999999999998888899999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCch
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPS 130 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~ 130 (589)
|++|+|++.+|..+..+++|+.|+|++|.+++..+-
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999999999999999999999999999999987764
No 269
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.57 E-value=1.7e-15 Score=167.73 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=110.2
Q ss_pred hhcccceEEEccCcccc-cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLT-GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|++. +.+|..|..+++|+.|+|++|+|++..|.+|++|++|+.|+|++|+|++..|..|..+++|+
T Consensus 466 ~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~ 545 (635)
T 4g8a_A 466 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545 (635)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCC
T ss_pred ccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCC
Confidence 34899999999999854 46788999999999999999999999999999999999999999999988889999999999
Q ss_pred eeeccCCcCcccCchhHhhccC---CccccCCCCCCCCCCccCcccc
Q 007788 116 FLDVQNNTLSGIVPSALKRLNG---GFQFQNNPGLCGDGIASLRACT 159 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~~~~~~~---~~~~~~n~~~c~~~~~~l~~~~ 159 (589)
.|||++|+|++..|..+..+.. .+.+.+|||.|+|.+.++..+.
T Consensus 546 ~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl 592 (635)
T 4g8a_A 546 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWI 592 (635)
T ss_dssp EEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred EEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHHH
Confidence 9999999999999998876632 4678999999999987776554
No 270
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.57 E-value=2.7e-15 Score=151.31 Aligned_cols=121 Identities=27% Similarity=0.401 Sum_probs=98.5
Q ss_pred ccccccccccccchh--hhhhhhhHhhcccceEEEccC-cccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCC
Q 007788 14 GKIIVFKEFSNKIFV--IIFQIQLKVILLCFVVLQLCC-NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKL 90 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L 90 (589)
+.|..++...+.|.. .++. .+..+++|++|+|++ |++++.+|..|+++++|++|+|++|+++|.+|..|+++++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~--~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPS--SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCG--GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred ceEEEEECCCCCccCCcccCh--hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 445555444444332 2211 233489999999994 99999999999999999999999999999999999999999
Q ss_pred CeeeccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhcc
Q 007788 91 KRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 91 ~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 136 (589)
++|+|++|+|+|.+|..+..+++|+.|+|++|+++|.+|..+..+.
T Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC
T ss_pred CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh
Confidence 9999999999999999999999999999999999999998887665
No 271
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.56 E-value=1.3e-14 Score=143.01 Aligned_cols=115 Identities=30% Similarity=0.289 Sum_probs=90.4
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++..|..|+.+++|+.|+|++|+|++..+..|+.+++|+.|+|++|++++..|..|..+++|+.
T Consensus 106 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 185 (270)
T 2o6q_A 106 DQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKT 185 (270)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred ccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCE
Confidence 34788888888888888776777888888888888888888655556788888888888888888666667888888888
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|+|++|++++..+..+..+.. .+.+.+|||.|+|.
T Consensus 186 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 186 LKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 888888888766666655543 46788899999885
No 272
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=8.2e-15 Score=134.67 Aligned_cols=113 Identities=22% Similarity=0.210 Sum_probs=97.6
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
.++|+.|+|++|++++..+..|+.+++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 46899999999999977777889999999999999999976666789999999999999999987777789999999999
Q ss_pred ccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 119 VQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|++|++++..+..+..+.. .+.+.+|++.|.++
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999999777666665543 46788999999875
No 273
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.56 E-value=6.8e-15 Score=151.46 Aligned_cols=117 Identities=25% Similarity=0.344 Sum_probs=93.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhh-h---hcCC
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPES-L---ANNA 112 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~---~~l~ 112 (589)
..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++ +|.. | ..++
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~ 163 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR-FPVELIKDGNKLP 163 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCGGGTC----CT
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe-eCHHHhcCcccCC
Confidence 347888888888888887767778888888888888888887778888888999999999999885 4544 4 5688
Q ss_pred CCceeeccCCcCcccCchhHhhcc----CCccccCCCCCCCCCCcc
Q 007788 113 ELLFLDVQNNTLSGIVPSALKRLN----GGFQFQNNPGLCGDGIAS 154 (589)
Q Consensus 113 ~L~~l~l~~N~l~g~~p~~~~~~~----~~~~~~~n~~~c~~~~~~ 154 (589)
+|+.|||++|+|++..+..+..+. ..+.+.+|||.|+|.+..
T Consensus 164 ~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~ 209 (361)
T 2xot_A 164 KLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQ 209 (361)
T ss_dssp TCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHH
T ss_pred cCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHH
Confidence 899999999999876666776664 347889999999997654
No 274
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.54 E-value=1e-14 Score=144.85 Aligned_cols=118 Identities=25% Similarity=0.257 Sum_probs=97.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++..+..|+.+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..+..+++|+.
T Consensus 126 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 205 (285)
T 1ozn_A 126 RGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMT 205 (285)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred hCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccE
Confidence 34888889999998888666667888899999999999988655567888999999999999999888888999999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCcc
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIAS 154 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~ 154 (589)
|+|++|++++..+..+..+.. .+.+.+|++.|+|.+..
T Consensus 206 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~ 245 (285)
T 1ozn_A 206 LYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARP 245 (285)
T ss_dssp EECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHH
T ss_pred eeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHH
Confidence 999999999877777766653 46788999999987654
No 275
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=1.6e-14 Score=131.89 Aligned_cols=89 Identities=26% Similarity=0.213 Sum_probs=55.6
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 45666666666666555666666666666666666666544445566666666666666666544445666666666666
Q ss_pred cCCcCcccC
Q 007788 120 QNNTLSGIV 128 (589)
Q Consensus 120 ~~N~l~g~~ 128 (589)
++|.+++..
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 666666443
No 276
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=153.54 Aligned_cols=121 Identities=22% Similarity=0.237 Sum_probs=107.2
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.
T Consensus 182 ~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 259 (440)
T 3zyj_A 182 EGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVE 259 (440)
T ss_dssp TTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCE
T ss_pred hcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCE
Confidence 34899999999999999 666 4899999999999999999988999999999999999999999988999999999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCcccc
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRACT 159 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~~ 159 (589)
|+|++|+|++..+..+..+.. .+.+.+|||.|+|.+.++..+.
T Consensus 260 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~ 304 (440)
T 3zyj_A 260 INLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWI 304 (440)
T ss_dssp EECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHH
T ss_pred EECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHH
Confidence 999999999887777766543 4678999999999987765443
No 277
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.52 E-value=2.7e-14 Score=144.90 Aligned_cols=98 Identities=24% Similarity=0.240 Sum_probs=66.8
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|+++ .+|+.++.+++|+.|+|++|++.+.+|..++++++|+.|+|++|++.+.+|..+..+++|+.|+
T Consensus 205 l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp CTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 666777777777766 3555666677777777777666666776677777777777777666666776666677777777
Q ss_pred ccCCcCcccCchhHhhccC
Q 007788 119 VQNNTLSGIVPSALKRLNG 137 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~ 137 (589)
|++|++.|.+|..+..+..
T Consensus 284 L~~n~~~~~iP~~l~~L~~ 302 (328)
T 4fcg_A 284 LRGCVNLSRLPSLIAQLPA 302 (328)
T ss_dssp CTTCTTCCCCCGGGGGSCT
T ss_pred CCCCCchhhccHHHhhccC
Confidence 7777776677766665543
No 278
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.52 E-value=8.3e-15 Score=147.14 Aligned_cols=120 Identities=21% Similarity=0.238 Sum_probs=102.3
Q ss_pred hhcccceEEEccCccccc-CCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLTG-NIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..+..+++|+
T Consensus 147 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 226 (306)
T 2z66_A 147 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226 (306)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCC
T ss_pred ccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCC
Confidence 348889999999999987 5788899999999999999999988888999999999999999999977777888899999
Q ss_pred eeeccCCcCcccCchhHhhcc---CCccccCCCCCCCCCCccCc
Q 007788 116 FLDVQNNTLSGIVPSALKRLN---GGFQFQNNPGLCGDGIASLR 156 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~~~~~~---~~~~~~~n~~~c~~~~~~l~ 156 (589)
.|+|++|++++..|..+..+. ..+.+.+|++.|+|.+..+.
T Consensus 227 ~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~ 270 (306)
T 2z66_A 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFL 270 (306)
T ss_dssp EEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHH
T ss_pred EeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHH
Confidence 999999999998888777653 24678899999998765443
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.52 E-value=1.2e-14 Score=160.41 Aligned_cols=122 Identities=18% Similarity=0.177 Sum_probs=106.4
Q ss_pred hhcccceEEEccCccccc-CCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLTG-NIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g-~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|++++ .+|..|+.+++|+.|+|++|++++..|..|+++++|+.|+|++|++++.+|..+..+++|+
T Consensus 445 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred cCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 348999999999999998 4788999999999999999999998899999999999999999999998899999999999
Q ss_pred eeeccCCcCcccCchhHhhccC---CccccCCCCCCCCCCccCcccc
Q 007788 116 FLDVQNNTLSGIVPSALKRLNG---GFQFQNNPGLCGDGIASLRACT 159 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~~~~~~~---~~~~~~n~~~c~~~~~~l~~~~ 159 (589)
.|+|++|+|+ .+|..+..+.. .+.+.+||+.|+|.+.++..+.
T Consensus 525 ~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 525 TLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQWV 570 (606)
T ss_dssp EEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTTT
T ss_pred EEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHHHHH
Confidence 9999999999 56766766642 4678999999999886655443
No 280
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.52 E-value=2.1e-14 Score=152.56 Aligned_cols=115 Identities=24% Similarity=0.231 Sum_probs=103.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|+.
T Consensus 296 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 375 (455)
T 3v47_A 296 SHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKE 375 (455)
T ss_dssp TTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccE
Confidence 34899999999999999888999999999999999999999888899999999999999999999888999999999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|+|++|++++..+..+..+.. .+.+.+|++.|+|+
T Consensus 376 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 376 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred EECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999999877766665543 46789999999987
No 281
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=3.3e-14 Score=130.26 Aligned_cols=87 Identities=25% Similarity=0.195 Sum_probs=52.8
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|+|++.+|..|+++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 45666666666666555666666666666666666666433334566666666666666666444344666666666666
Q ss_pred cCCcCcc
Q 007788 120 QNNTLSG 126 (589)
Q Consensus 120 ~~N~l~g 126 (589)
++|.++.
T Consensus 113 ~~N~~~c 119 (174)
T 2r9u_A 113 YNNPWDC 119 (174)
T ss_dssp CSSCBCT
T ss_pred CCCCccc
Confidence 6666653
No 282
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.51 E-value=3.7e-15 Score=170.65 Aligned_cols=117 Identities=26% Similarity=0.261 Sum_probs=90.3
Q ss_pred cccceEEEccCcccc-----cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCC
Q 007788 39 LLCFVVLQLCCNQLT-----GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAE 113 (589)
Q Consensus 39 l~~l~~L~L~~n~l~-----g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 113 (589)
+++|+.|+|++|.++ +..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++
T Consensus 450 ~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~ 527 (844)
T 3j0a_A 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--AN 527 (844)
T ss_dssp CTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SC
T ss_pred CCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--cc
Confidence 566666666666665 34445677888888888888888887788888888888888888888866555554 78
Q ss_pred CceeeccCCcCcccCchhHhhccCCccccCCCCCCCCCCccCccc
Q 007788 114 LLFLDVQNNTLSGIVPSALKRLNGGFQFQNNPGLCGDGIASLRAC 158 (589)
Q Consensus 114 L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n~~~c~~~~~~l~~~ 158 (589)
|+.|||++|+|+|.+|..+..+. .+.+.+||+.|+|.+..+..+
T Consensus 528 L~~L~Ls~N~l~~~~~~~~~~L~-~l~l~~Np~~C~c~~~~f~~~ 571 (844)
T 3j0a_A 528 LEILDISRNQLLAPNPDVFVSLS-VLDITHNKFICECELSTFINW 571 (844)
T ss_dssp CCEEEEEEECCCCCCSCCCSSCC-EEEEEEECCCCSSSCCSHHHH
T ss_pred ccEEECCCCcCCCCChhHhCCcC-EEEecCCCcccccccHHHHHH
Confidence 88888888888888888776543 467899999999988766544
No 283
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=4.6e-14 Score=128.73 Aligned_cols=112 Identities=26% Similarity=0.304 Sum_probs=97.7
Q ss_pred ceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccC
Q 007788 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQN 121 (589)
Q Consensus 42 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~ 121 (589)
.+.|++++|.|+ .+|..+. ++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887664 8999999999999988899999999999999999999977777789999999999999
Q ss_pred CcCcccCchhHhhccC--CccccCCCCCCCCC-CccCc
Q 007788 122 NTLSGIVPSALKRLNG--GFQFQNNPGLCGDG-IASLR 156 (589)
Q Consensus 122 N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~-~~~l~ 156 (589)
|+|++..|..+..+.. .+.+.+|++.|.|. +..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~ 125 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLS 125 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHH
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHH
Confidence 9999888877776654 56789999999985 54443
No 284
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.49 E-value=5.4e-14 Score=134.05 Aligned_cols=123 Identities=20% Similarity=0.074 Sum_probs=101.0
Q ss_pred EEeeccccccccc-----------ccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccC
Q 007788 5 YFLDECGIHGKII-----------VFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQH 73 (589)
Q Consensus 5 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~ 73 (589)
..|..|.|+.... .++...|.|...... .+..+++|+.|+|++|+|++..|..|+.+++|+.|+|++
T Consensus 37 L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 37 LRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEG--AFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp EECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTT--TTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred EEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHH--HhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 4566666665422 124444444432221 234599999999999999988888899999999999999
Q ss_pred CcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccCCcCcccCc
Q 007788 74 NRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVP 129 (589)
Q Consensus 74 N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p 129 (589)
|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999889999999999999999999998889999999999999999999998765
No 285
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=2.2e-14 Score=152.32 Aligned_cols=119 Identities=22% Similarity=0.237 Sum_probs=105.5
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++ +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.
T Consensus 193 ~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 270 (452)
T 3zyi_A 193 EGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVE 270 (452)
T ss_dssp TTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCE
Confidence 348999999999999994 55 5899999999999999999988999999999999999999999988999999999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCcc
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRA 157 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~ 157 (589)
|+|++|+|++..+..+..+.. .+.+.+|||.|+|.+..+..
T Consensus 271 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~ 313 (452)
T 3zyi_A 271 LNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAW 313 (452)
T ss_dssp EECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHH
T ss_pred EECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHHH
Confidence 999999999877777666543 46789999999998876543
No 286
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.49 E-value=6.1e-14 Score=136.58 Aligned_cols=97 Identities=26% Similarity=0.239 Sum_probs=56.7
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 55666666666666655555566666666666666666654445556666666666666666644444455566666666
Q ss_pred ccCCcCcccCchhHhhc
Q 007788 119 VQNNTLSGIVPSALKRL 135 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~ 135 (589)
|++|+|++..|..+..+
T Consensus 138 Ls~N~l~~~~~~~~~~l 154 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKL 154 (251)
T ss_dssp CCSSCCCCCCTTTTTTC
T ss_pred CcCCcCCccCHHHcCcC
Confidence 66666665554444433
No 287
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.46 E-value=6.7e-14 Score=124.62 Aligned_cols=89 Identities=26% Similarity=0.247 Sum_probs=49.0
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCC-ChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGT-IPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~l 117 (589)
+++|+.|+|++|++++. ..++.+++|+.|+|++|++++.+|..++++++|+.|+|++|++++. .|..+..+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 55555555555555533 4455555555555555555554555555555555555555555532 22455555555555
Q ss_pred eccCCcCcccCc
Q 007788 118 DVQNNTLSGIVP 129 (589)
Q Consensus 118 ~l~~N~l~g~~p 129 (589)
++++|++++..+
T Consensus 119 ~l~~N~l~~~~~ 130 (149)
T 2je0_A 119 DLFNCEVTNLND 130 (149)
T ss_dssp ECTTCGGGGSTT
T ss_pred eCcCCcccchHH
Confidence 555555554443
No 288
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.46 E-value=5.7e-14 Score=154.88 Aligned_cols=121 Identities=23% Similarity=0.271 Sum_probs=104.6
Q ss_pred hhcccceEEEccCcccccC---CCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCC
Q 007788 37 VILLCFVVLQLCCNQLTGN---IPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAE 113 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~---~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~ 113 (589)
..+++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+..+++
T Consensus 446 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 525 (606)
T 3t6q_A 446 DGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKG 525 (606)
T ss_dssp TTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCS
T ss_pred hCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcccc
Confidence 3488999999999999873 3367899999999999999999888999999999999999999999999999999999
Q ss_pred CceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCccc
Q 007788 114 LLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRAC 158 (589)
Q Consensus 114 L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~ 158 (589)
| .|+|++|++++.+|..+..+.. .+.+.+||+.|+|....+..+
T Consensus 526 L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w 571 (606)
T 3t6q_A 526 I-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEW 571 (606)
T ss_dssp C-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHH
T ss_pred c-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHH
Confidence 9 9999999999998888776643 578899999999986554433
No 289
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=6.6e-14 Score=143.22 Aligned_cols=110 Identities=19% Similarity=0.266 Sum_probs=57.8
Q ss_pred EEccCc-ccccCCCccccCCCCCCeEeccC-CcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccCC
Q 007788 45 LQLCCN-QLTGNIPAQIGSLKSLSVLTLQH-NRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNN 122 (589)
Q Consensus 45 L~L~~n-~l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N 122 (589)
+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 355554 555 3455 55555555555554 5555444455555555555555555555555555555555555555555
Q ss_pred cCcccCchhHhhcc-CCccccCCCCCCCCCCccCc
Q 007788 123 TLSGIVPSALKRLN-GGFQFQNNPGLCGDGIASLR 156 (589)
Q Consensus 123 ~l~g~~p~~~~~~~-~~~~~~~n~~~c~~~~~~l~ 156 (589)
+|++..|..+..+. ..+.+.+|++.|+|.+..+.
T Consensus 91 ~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~ 125 (347)
T 2ifg_A 91 ALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQ 125 (347)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHH
T ss_pred ccceeCHHHcccCCceEEEeeCCCccCCCccHHHH
Confidence 55544444333221 12345555556665544433
No 290
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.45 E-value=2e-13 Score=127.31 Aligned_cols=110 Identities=17% Similarity=0.145 Sum_probs=91.7
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|.. ++ ..+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 32 ~l~~L~L~~n~i~~-ip--~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 108 (193)
T 2wfh_A 32 DVTELYLDGNQFTL-VP--KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLS 108 (193)
T ss_dssp TCCEEECCSSCCCS-CC--GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCcCch-hH--HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEE
Confidence 34444444444432 21 1334599999999999999988888999999999999999999988888999999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCccc
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 109 LHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 999999966666799999999999999999864
No 291
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.45 E-value=1.7e-13 Score=124.56 Aligned_cols=89 Identities=27% Similarity=0.266 Sum_probs=69.7
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCC-hhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI-PESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~l 117 (589)
+++|+.|+|++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|+.|+|++|+|++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 78888888888888854 67788888888888888888777777777888888888888888531 2677788888888
Q ss_pred eccCCcCcccCc
Q 007788 118 DVQNNTLSGIVP 129 (589)
Q Consensus 118 ~l~~N~l~g~~p 129 (589)
++++|++++..+
T Consensus 126 ~l~~N~l~~~~~ 137 (168)
T 2ell_A 126 DLFNCEVTNLND 137 (168)
T ss_dssp ECCSSGGGTSTT
T ss_pred EeeCCcCcchHH
Confidence 888888886655
No 292
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.45 E-value=1.9e-13 Score=131.09 Aligned_cols=105 Identities=27% Similarity=0.223 Sum_probs=90.7
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
.++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 39 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 39 PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 47899999999999998899999999999999999999865556789999999999999999977777789999999999
Q ss_pred ccCCcCcccCchhHhhccC--CccccCC
Q 007788 119 VQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
|++|+|+ .+|..+..+.. .+.+.+|
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N 145 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQN 145 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSS
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCC
Confidence 9999999 77877766543 2344444
No 293
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.44 E-value=5.5e-14 Score=155.71 Aligned_cols=84 Identities=18% Similarity=0.261 Sum_probs=65.9
Q ss_pred ccccCCCccccCCCCCCeEeccCCcCCcc-----------------CCcccc--CCCCCCeeeccCccccCCChhhhhcC
Q 007788 51 QLTGNIPAQIGSLKSLSVLTLQHNRLNGG-----------------IPDSLG--NLGKLKRLDLSFNSLFGTIPESLANN 111 (589)
Q Consensus 51 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-----------------~p~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l 111 (589)
+|+| ||..|+++++|++|+|++|+|+|. +|++++ +|++|++|+|++|++.|.+|+.++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4445 777788888888888888888875 888877 88888888888888888888888888
Q ss_pred CCCceeeccCCc-Ccc-cCchhHhhc
Q 007788 112 AELLFLDVQNNT-LSG-IVPSALKRL 135 (589)
Q Consensus 112 ~~L~~l~l~~N~-l~g-~~p~~~~~~ 135 (589)
++|+.|+|++|+ ++| .+|..+..+
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L 298 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQAL 298 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHH
T ss_pred CCCCEEECcCCCCCccccchHHHHhh
Confidence 888888888887 887 777776654
No 294
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=1.9e-13 Score=125.15 Aligned_cols=112 Identities=25% Similarity=0.289 Sum_probs=96.3
Q ss_pred ceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccC
Q 007788 42 FVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQN 121 (589)
Q Consensus 42 l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~ 121 (589)
-+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 8888775 8999999999999988899999999999999999999976666688999999999999
Q ss_pred CcCcccCchhHhhccC--CccccCCCCCCCCC-CccCc
Q 007788 122 NTLSGIVPSALKRLNG--GFQFQNNPGLCGDG-IASLR 156 (589)
Q Consensus 122 N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~-~~~l~ 156 (589)
|+|++..+..+..+.. .+.+.+|++.|.|. +..++
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~ 128 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLR 128 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHH
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccccHHHHH
Confidence 9999877766776654 46789999999985 44333
No 295
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.44 E-value=2e-13 Score=125.39 Aligned_cols=113 Identities=21% Similarity=0.165 Sum_probs=91.8
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... .+..+++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..|..|.++++|+.|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHG--VFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TCSEEECCSSCCCCCCTT--TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcEEEeCCCcccEeCHH--HhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 344445444554422211 234489999999999999977667789999999999999999977777789999999999
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCc
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVP 129 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p 129 (589)
|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666667889999999999999998776
No 296
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.43 E-value=1.7e-13 Score=139.03 Aligned_cols=96 Identities=22% Similarity=0.270 Sum_probs=65.5
Q ss_pred cccceEEEccCcccccCCCccccC---------CCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhh
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGS---------LKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~---------l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 109 (589)
+++|++|+|++|++.+.+|..++. +++|+.|+|++|+|+ .+|..++++++|+.|+|++|++++ +|+.+.
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhc
Confidence 667777777776666677766544 677777777777776 667667777777777777777773 555666
Q ss_pred cCCCCceeeccCCcCcccCchhHhhcc
Q 007788 110 NNAELLFLDVQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 110 ~l~~L~~l~l~~N~l~g~~p~~~~~~~ 136 (589)
.+++|+.|+|++|++.+.+|..+..+.
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 777777777777777777666655543
No 297
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.43 E-value=2.9e-13 Score=128.93 Aligned_cols=107 Identities=21% Similarity=0.120 Sum_probs=90.0
Q ss_pred cccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCc
Q 007788 19 FKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFN 98 (589)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 98 (589)
++...|+|...... .+..+++|++|+|++|+|+...+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 61 L~Ls~N~i~~~~~~--~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 138 (220)
T 2v9t_B 61 IDLSNNQISELAPD--AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN 138 (220)
T ss_dssp EECCSSCCCEECTT--TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EECCCCcCCCcCHH--HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCC
Confidence 34445555432221 2344999999999999999665567899999999999999999988999999999999999999
Q ss_pred cccCCChhhhhcCCCCceeeccCCcCccc
Q 007788 99 SLFGTIPESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 99 ~l~g~~p~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
+|++..+..|..+++|+.|+|++|.+...
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 139 KLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99988778899999999999999999763
No 298
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.42 E-value=9.7e-14 Score=155.58 Aligned_cols=102 Identities=35% Similarity=0.439 Sum_probs=87.2
Q ss_pred cchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCC
Q 007788 25 KIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 104 (589)
.||..++. |++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|.+|++|++|+.|+|++|.|+ .+
T Consensus 238 ~l~~~~~~------l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 238 NISANIFK------YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp CCCGGGGG------CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CC
T ss_pred CCChhhcC------CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-cc
Confidence 45555554 888999999999998 88888999999999999999998 78999999999999999999987 78
Q ss_pred hhhhhcCCCCceeeccCCcCcccCchhHhhc
Q 007788 105 PESLANNAELLFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 105 p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 135 (589)
|..|+.+++|+.|+|++|+|+|.+|..+..+
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 339 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEK 339 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHH
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhc
Confidence 8889999999999999999998888877543
No 299
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.42 E-value=2.9e-13 Score=133.72 Aligned_cols=98 Identities=26% Similarity=0.305 Sum_probs=76.8
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccC-CChhhhhcCCCCce
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFG-TIPESLANNAELLF 116 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~ 116 (589)
.+++|++|+|++|.+++..|..|+++++|+.|+|++|++++..+..++++++|+.|+|++|++++ .+|..+..+++|+.
T Consensus 74 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~ 153 (276)
T 2z62_A 74 SLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEH 153 (276)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCE
T ss_pred CCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCE
Confidence 37888888888888887777788888888888888888886666678888888888888888876 36788888888888
Q ss_pred eeccCCcCcccCchhHhhc
Q 007788 117 LDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~ 135 (589)
|+|++|++++..+..+..+
T Consensus 154 L~Ls~N~l~~~~~~~~~~l 172 (276)
T 2z62_A 154 LDLSSNKIQSIYCTDLRVL 172 (276)
T ss_dssp EECCSSCCCEECGGGGHHH
T ss_pred EECCCCCCCcCCHHHhhhh
Confidence 8888888887766655443
No 300
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.42 E-value=2.2e-13 Score=148.86 Aligned_cols=118 Identities=23% Similarity=0.297 Sum_probs=107.0
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCC-ccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLN-GGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|+++ +.+|..++.+++|+.|+|++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 44899999999999999999999999999999999999998 68999999999999999999999988899999999999
Q ss_pred eeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCcc
Q 007788 116 FLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIAS 154 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~ 154 (589)
.|+|++|++++.+|..+..+.. .+.+.+|++.|+|+...
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 9999999999988887776654 46789999999987543
No 301
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.42 E-value=2e-13 Score=150.91 Aligned_cols=123 Identities=17% Similarity=0.083 Sum_probs=81.3
Q ss_pred ccccccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCC
Q 007788 12 IHGKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLK 91 (589)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 91 (589)
|+..+..+|...|.|...... .+..|++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|+
T Consensus 50 lp~~~~~LdLs~N~i~~l~~~--~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~ 127 (635)
T 4g8a_A 50 LPFSTKNLDLSFNPLRHLGSY--SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 127 (635)
T ss_dssp SCTTCCEEECTTSCCCEECTT--TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCC
T ss_pred CCcCCCEEEeeCCCCCCCCHH--HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCC
Confidence 344555566666665533221 234477777777777777766666777777777777777777755555677777777
Q ss_pred eeeccCccccCCChhhhhcCCCCceeeccCCcCccc-CchhHhhcc
Q 007788 92 RLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGI-VPSALKRLN 136 (589)
Q Consensus 92 ~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~-~p~~~~~~~ 136 (589)
+|+|++|+|++..|..|+++++|+.|+|++|++++. +|..+..+.
T Consensus 128 ~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 128 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred EEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 777777777755555677777777777777777653 455555443
No 302
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.42 E-value=1.3e-13 Score=147.40 Aligned_cols=127 Identities=19% Similarity=0.158 Sum_probs=107.9
Q ss_pred cccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccC
Q 007788 23 SNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFG 102 (589)
Q Consensus 23 ~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g 102 (589)
.+.+|..++. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++
T Consensus 213 ~~~~~~~~~~------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 286 (477)
T 2id5_A 213 LDTMTPNCLY------GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV 286 (477)
T ss_dssp CCEECTTTTT------TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE
T ss_pred ccccCccccc------CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccce
Confidence 3445554444 5589999999999995444689999999999999999998888889999999999999999999
Q ss_pred CChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccC
Q 007788 103 TIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASL 155 (589)
Q Consensus 103 ~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l 155 (589)
..|..|..+++|+.|+|++|+|++..+..+..+.. .+.+.+|++.|+|.+.++
T Consensus 287 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~ 341 (477)
T 2id5_A 287 VEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWV 341 (477)
T ss_dssp ECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHH
T ss_pred ECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhH
Confidence 99999999999999999999999877776655543 567899999999987654
No 303
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=8.3e-14 Score=157.86 Aligned_cols=81 Identities=22% Similarity=0.289 Sum_probs=71.9
Q ss_pred CCccccCCCCCCeEeccCCcCCc-----------------cCCcccc--CCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 56 IPAQIGSLKSLSVLTLQHNRLNG-----------------GIPDSLG--NLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 56 ~p~~~~~l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
||..|++|++|+.|+|++|+|+| .+|++++ +|++|+.|+|++|++.|.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78889999999999999999998 4899988 9999999999999999999999999999999
Q ss_pred eeccCCc-Ccc-cCchhHhhcc
Q 007788 117 LDVQNNT-LSG-IVPSALKRLN 136 (589)
Q Consensus 117 l~l~~N~-l~g-~~p~~~~~~~ 136 (589)
|+|++|+ |+| .+|..+..+.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~ 541 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLA 541 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHH
T ss_pred EECcCCCCcccccchHHHHhhh
Confidence 9999998 998 8888777654
No 304
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.41 E-value=4.9e-13 Score=149.49 Aligned_cols=121 Identities=23% Similarity=0.250 Sum_probs=98.3
Q ss_pred hhcccceEEEccCcccccCCC--------ccccCCCCCCeEeccCCcCCccCCc-cccCCCCCCeeeccCccccCCChhh
Q 007788 37 VILLCFVVLQLCCNQLTGNIP--------AQIGSLKSLSVLTLQHNRLNGGIPD-SLGNLGKLKRLDLSFNSLFGTIPES 107 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p--------~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~ 107 (589)
..+++|+.|+|++|++++..+ ..|+++++|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+|++..|..
T Consensus 501 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 579 (680)
T 1ziw_A 501 EGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLGLNNLNTLPASV 579 (680)
T ss_dssp TTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred ccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECCCCCCCcCCHhH
Confidence 348889999999998886422 24788899999999999999 5554 6899999999999999999766667
Q ss_pred hhcCCCCceeeccCCcCcccCchhHh-hcc--CCccccCCCCCCCCCC-ccCccc
Q 007788 108 LANNAELLFLDVQNNTLSGIVPSALK-RLN--GGFQFQNNPGLCGDGI-ASLRAC 158 (589)
Q Consensus 108 ~~~l~~L~~l~l~~N~l~g~~p~~~~-~~~--~~~~~~~n~~~c~~~~-~~l~~~ 158 (589)
|..+++|+.|+|++|+|++..|..+. .+. ..+.+.+|||.|+|.. .++..+
T Consensus 580 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~ 634 (680)
T 1ziw_A 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNW 634 (680)
T ss_dssp TTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECC
T ss_pred hCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHH
Confidence 88999999999999999998888765 343 2567899999999985 665544
No 305
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.41 E-value=7.6e-13 Score=130.45 Aligned_cols=94 Identities=24% Similarity=0.236 Sum_probs=48.3
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 45555555555555544444455555555555555555544444455555555555555555544444445555555555
Q ss_pred ccCCcCcccCchhH
Q 007788 119 VQNNTLSGIVPSAL 132 (589)
Q Consensus 119 l~~N~l~g~~p~~~ 132 (589)
|++|++++..|..+
T Consensus 164 l~~n~l~~~~~~~~ 177 (272)
T 3rfs_A 164 LSYNQLQSLPEGVF 177 (272)
T ss_dssp CCSSCCCCCCTTTT
T ss_pred CCCCCcCccCHHHh
Confidence 55555554444333
No 306
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.40 E-value=5e-13 Score=145.29 Aligned_cols=91 Identities=31% Similarity=0.292 Sum_probs=53.0
Q ss_pred cceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeecc
Q 007788 41 CFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQ 120 (589)
Q Consensus 41 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~ 120 (589)
.|+.|+|++|+|++ +|. |+.|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 35556666666653 444 566666666666666666 556666666666666666666664 45 55556666666666
Q ss_pred CCcCcccC-chhHhhcc
Q 007788 121 NNTLSGIV-PSALKRLN 136 (589)
Q Consensus 121 ~N~l~g~~-p~~~~~~~ 136 (589)
+|+|++.+ |..+..+.
T Consensus 517 ~N~l~~~~~p~~l~~l~ 533 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCP 533 (567)
T ss_dssp SSCCCSSSTTGGGGGCT
T ss_pred CCCCCCCCCcHHHhcCC
Confidence 66666554 55555443
No 307
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.39 E-value=6.1e-13 Score=118.34 Aligned_cols=96 Identities=23% Similarity=0.268 Sum_probs=87.0
Q ss_pred cccceEEEccCcccc-cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLT-GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.++|+.|+|++|.++ +.+|..++.+++|+.|+|++|++++. ..++++++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 578999999999999 89999999999999999999999965 789999999999999999998899999999999999
Q ss_pred eccCCcCccc-CchhHhhcc
Q 007788 118 DVQNNTLSGI-VPSALKRLN 136 (589)
Q Consensus 118 ~l~~N~l~g~-~p~~~~~~~ 136 (589)
++++|++++. .|..+..+.
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~ 113 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLE 113 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCT
T ss_pred ECCCCcCCChHHHHHHhhCC
Confidence 9999999974 346666554
No 308
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.39 E-value=4e-13 Score=138.16 Aligned_cols=93 Identities=22% Similarity=0.114 Sum_probs=63.0
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 36667777777777776555667777777777777777775555566777777777777777776666667777777777
Q ss_pred eccCCcCcccCch
Q 007788 118 DVQNNTLSGIVPS 130 (589)
Q Consensus 118 ~l~~N~l~g~~p~ 130 (589)
+|++|+|++..+.
T Consensus 142 ~L~~N~l~~l~~~ 154 (361)
T 2xot_A 142 YLSQNQISRFPVE 154 (361)
T ss_dssp ECCSSCCCSCCGG
T ss_pred ECCCCcCCeeCHH
Confidence 7777777654433
No 309
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.38 E-value=1.2e-12 Score=123.41 Aligned_cols=94 Identities=23% Similarity=0.237 Sum_probs=85.0
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|++|+|++|++++..+..|+.+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+..+++|+.
T Consensus 73 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 152 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQY 152 (208)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccE
Confidence 44899999999999999776677899999999999999999777777899999999999999999777667899999999
Q ss_pred eeccCCcCcccCch
Q 007788 117 LDVQNNTLSGIVPS 130 (589)
Q Consensus 117 l~l~~N~l~g~~p~ 130 (589)
|+|++|.+.+..|.
T Consensus 153 L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 153 IWLHDNPWDCTCPG 166 (208)
T ss_dssp EECCSCCBCCCTTT
T ss_pred EEecCCCeecCCCC
Confidence 99999999987763
No 310
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.38 E-value=1.2e-12 Score=128.81 Aligned_cols=100 Identities=23% Similarity=0.235 Sum_probs=76.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|++|+|++|+++...+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.
T Consensus 58 ~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 137 (270)
T 2o6q_A 58 HRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137 (270)
T ss_dssp SSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE
Confidence 34788888888888888555556678888888888888888666666788888888888888888777777788888888
Q ss_pred eeccCCcCcccCchhHhhcc
Q 007788 117 LDVQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~ 136 (589)
|+|++|++++..+..+..+.
T Consensus 138 L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 138 LSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCT
T ss_pred EECCCCcCCccCHhHccCCc
Confidence 88888888876665555443
No 311
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.38 E-value=2.9e-13 Score=149.91 Aligned_cols=117 Identities=12% Similarity=0.218 Sum_probs=100.5
Q ss_pred ccccccchhhhhhhhhHhhcccceEEEccCcccccC-----------------CCcccc--CCCCCCeEeccCCcCCccC
Q 007788 20 KEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGN-----------------IPAQIG--SLKSLSVLTLQHNRLNGGI 80 (589)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~L~~N~l~g~~ 80 (589)
|.+++ ||..+.. +++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|.+
T Consensus 193 n~l~~-ip~~l~~------l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 193 NNITF-VSKAVMR------LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp CEEEE-ECGGGGG------CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred CCCcc-CCHHHhc------ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 35555 7766655 99999999999999986 999999 9999999999999999999
Q ss_pred CccccCCCCCCeeeccCcc-ccC-CChhhhhcC------CCCceeeccCCcCcccCch--hHhhccC--CccccCC
Q 007788 81 PDSLGNLGKLKRLDLSFNS-LFG-TIPESLANN------AELLFLDVQNNTLSGIVPS--ALKRLNG--GFQFQNN 144 (589)
Q Consensus 81 p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l------~~L~~l~l~~N~l~g~~p~--~~~~~~~--~~~~~~n 144 (589)
|.+|+++++|+.|+|++|+ |+| .+|..++.+ ++|+.|+|++|+++ .+|. .+..+.. .+.+.+|
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 9999999999999999998 999 899998887 89999999999999 7887 7776653 2344444
No 312
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.38 E-value=9.6e-13 Score=130.97 Aligned_cols=95 Identities=31% Similarity=0.316 Sum_probs=59.5
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|+|++. |.. +.+++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 53 ~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L 129 (290)
T 1p9a_G 53 PYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129 (290)
T ss_dssp TCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEE
Confidence 366677777777766643 322 56666666666666666 566666666666666666666665555566666666666
Q ss_pred eccCCcCcccCchhHhhc
Q 007788 118 DVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~ 135 (589)
+|++|+|++..+..+..+
T Consensus 130 ~L~~N~l~~~~~~~~~~l 147 (290)
T 1p9a_G 130 YLKGNELKTLPPGLLTPT 147 (290)
T ss_dssp ECTTSCCCCCCTTTTTTC
T ss_pred ECCCCCCCccChhhcccc
Confidence 666666665555444433
No 313
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.38 E-value=5.2e-13 Score=145.84 Aligned_cols=115 Identities=27% Similarity=0.335 Sum_probs=95.2
Q ss_pred hhcccceEEEccCcccccCCCc-cccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLTGNIPA-QIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|+
T Consensus 400 ~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~ 476 (562)
T 3a79_B 400 KNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQ 476 (562)
T ss_dssp TTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCS
T ss_pred cCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCC
Confidence 4488888999999988875665 578888899999999998887777665 78999999999999 7898888999999
Q ss_pred eeeccCCcCcccCchh-HhhccC--CccccCCCCCCCCCCccC
Q 007788 116 FLDVQNNTLSGIVPSA-LKRLNG--GFQFQNNPGLCGDGIASL 155 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~-~~~~~~--~~~~~~n~~~c~~~~~~l 155 (589)
.|+|++|+|++ +|.. +..+.. .+.+.+|++.|+|++.++
T Consensus 477 ~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 477 ELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp EEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred EEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 99999999995 5554 665543 467899999999987655
No 314
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.38 E-value=5.4e-13 Score=144.21 Aligned_cols=116 Identities=25% Similarity=0.300 Sum_probs=97.9
Q ss_pred HhhcccceEEEccCcccccCCCc-cccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCC
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPA-QIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAEL 114 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L 114 (589)
+..+++|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 370 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L 446 (520)
T 2z7x_B 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL 446 (520)
T ss_dssp HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCC
Confidence 34588999999999999986776 488899999999999999988887765 79999999999999 889988899999
Q ss_pred ceeeccCCcCcccCchh-HhhccC--CccccCCCCCCCCCCccC
Q 007788 115 LFLDVQNNTLSGIVPSA-LKRLNG--GFQFQNNPGLCGDGIASL 155 (589)
Q Consensus 115 ~~l~l~~N~l~g~~p~~-~~~~~~--~~~~~~n~~~c~~~~~~l 155 (589)
+.|+|++|+|++ +|.. +..+.. .+.+.+|++.|+|.+.++
T Consensus 447 ~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 447 QELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp CEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred CEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 999999999995 5554 655543 467899999999987666
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.37 E-value=3.5e-13 Score=144.22 Aligned_cols=107 Identities=27% Similarity=0.264 Sum_probs=64.3
Q ss_pred cccceEEEccCcccccCCCcccc-CCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIG-SLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
+++|+.|+|++|.|++.+|..+. .+++|+.|+|++|+|++. | .+..+++|+.|+|++|+|++ +|+.+..+++|+.|
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L 219 (487)
T 3oja_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWI 219 (487)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEE
T ss_pred CCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEE
Confidence 66666666666666666666554 566666666666666644 2 23346667777777777664 33446666677777
Q ss_pred eccCCcCcccCchhHhhccC--CccccCCCCCCC
Q 007788 118 DVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCG 149 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~ 149 (589)
+|++|+|++ +|..+..+.. .+.+.+|++.|+
T Consensus 220 ~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 220 SLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp ECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred EecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 777777765 4444433322 345566666654
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.36 E-value=1.5e-12 Score=129.13 Aligned_cols=98 Identities=26% Similarity=0.260 Sum_probs=74.0
Q ss_pred cccceEEEccCcc-cccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQ-LTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
+++|+.|+|++|. ++...|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..+..+..+++|+.|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 7778888888886 665556778888888888888888887667777888888888888888886655667778888888
Q ss_pred eccCCcCcccCchhHhhcc
Q 007788 118 DVQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~ 136 (589)
+|++|++++..+..+..+.
T Consensus 159 ~l~~n~l~~~~~~~~~~l~ 177 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLH 177 (285)
T ss_dssp ECCSSCCCEECTTTTTTCT
T ss_pred ECCCCcccccCHHHhcCcc
Confidence 8888888766665555443
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.36 E-value=1.7e-12 Score=128.19 Aligned_cols=131 Identities=17% Similarity=0.101 Sum_probs=105.8
Q ss_pred ccccccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCC
Q 007788 12 IHGKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLK 91 (589)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~ 91 (589)
++..+..++...|.|...... .+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+
T Consensus 26 l~~~l~~L~ls~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (276)
T 2z62_A 26 LPFSTKNLDLSFNPLRHLGSY--SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (276)
T ss_dssp SCTTCCEEECTTCCCCEECTT--TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCCccEEECCCCcccccCHh--HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCcccc
Confidence 444555566665555433221 234489999999999999987778999999999999999999988888999999999
Q ss_pred eeeccCccccCCChhhhhcCCCCceeeccCCcCccc-CchhHhhccC--CccccCC
Q 007788 92 RLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGI-VPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 92 ~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~--~~~~~~n 144 (589)
.|+|++|++++..+..+..+++|+.|+|++|++++. +|..+..+.. .+.+.+|
T Consensus 104 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 999999999977666899999999999999999874 6888877654 3445555
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.35 E-value=1.7e-12 Score=121.38 Aligned_cols=95 Identities=20% Similarity=0.154 Sum_probs=72.1
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|.++ . ++.++.+++|+.|+|++|++++..|..|+.|++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 778888888888655 3 34678888888888888888877788888888888888888888877788888888888888
Q ss_pred ccCCcCcccCchhHhhcc
Q 007788 119 VQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~ 136 (589)
|++|++-+.+| .+..+.
T Consensus 143 L~~n~~i~~~~-~l~~l~ 159 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLP 159 (197)
T ss_dssp CCSCTBCCCCG-GGGGCS
T ss_pred ccCCCCccccH-hhcCCC
Confidence 88887333455 344443
No 319
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=9.9e-13 Score=134.42 Aligned_cols=95 Identities=22% Similarity=0.161 Sum_probs=83.9
Q ss_pred cchhhhhhhhhHhhcccceEEEccC-cccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCC
Q 007788 25 KIFVIIFQIQLKVILLCFVVLQLCC-NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGT 103 (589)
Q Consensus 25 ~~~~~~~~~~~~~~l~~l~~L~L~~-n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 103 (589)
.||. +.. +++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|++|++|+.|+|++|+|++.
T Consensus 23 ~ip~-l~~------~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 95 (347)
T 2ifg_A 23 SLHH-LPG------AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESL 95 (347)
T ss_dssp TTTT-SCS------CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCC
T ss_pred ccCC-CCC------CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcccee
Confidence 4666 544 89999999996 999988888999999999999999999999999999999999999999999966
Q ss_pred ChhhhhcCCCCceeeccCCcCccc
Q 007788 104 IPESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 104 ~p~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
.|..+..++ |+.|+|++|+|...
T Consensus 96 ~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 96 SWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp CSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CHHHcccCC-ceEEEeeCCCccCC
Confidence 555565555 99999999999854
No 320
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.34 E-value=5.5e-13 Score=151.13 Aligned_cols=117 Identities=18% Similarity=0.231 Sum_probs=100.3
Q ss_pred ccccccchhhhhhhhhHhhcccceEEEccCccccc-----------------CCCcccc--CCCCCCeEeccCCcCCccC
Q 007788 20 KEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTG-----------------NIPAQIG--SLKSLSVLTLQHNRLNGGI 80 (589)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g-----------------~~p~~~~--~l~~L~~L~L~~N~l~g~~ 80 (589)
|.+.+ ||..+.. |++|+.|+|++|+|+| .+|+.++ +|++|+.|+|++|++.|.+
T Consensus 435 N~L~~-IP~~l~~------L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~i 507 (876)
T 4ecn_A 435 NRITF-ISKAIQR------LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQL 507 (876)
T ss_dssp CEEEE-ECGGGGG------CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSC
T ss_pred Ccccc-hhHHHhc------CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccC
Confidence 34444 7766555 9999999999999998 4999988 9999999999999999999
Q ss_pred CccccCCCCCCeeeccCcc-ccC-CChhhhhcCC-------CCceeeccCCcCcccCch--hHhhccC--CccccCC
Q 007788 81 PDSLGNLGKLKRLDLSFNS-LFG-TIPESLANNA-------ELLFLDVQNNTLSGIVPS--ALKRLNG--GFQFQNN 144 (589)
Q Consensus 81 p~~~~~l~~L~~L~ls~N~-l~g-~~p~~~~~l~-------~L~~l~l~~N~l~g~~p~--~~~~~~~--~~~~~~n 144 (589)
|..|++|++|+.|+|++|+ |+| .+|..++.++ +|+.|+|++|+|+ .+|. .+..+.. .+.+.+|
T Consensus 508 P~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N 583 (876)
T 4ecn_A 508 PDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHN 583 (876)
T ss_dssp CGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTS
T ss_pred hHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCC
Confidence 9999999999999999998 999 8999888776 9999999999999 7888 7776654 3445555
No 321
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.34 E-value=3.3e-12 Score=138.93 Aligned_cols=112 Identities=21% Similarity=0.287 Sum_probs=92.9
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccc------------------cCCCCCCeeeccC
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSL------------------GNLGKLKRLDLSF 97 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~------------------~~l~~L~~L~ls~ 97 (589)
...+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+++ .+|..+ +++++|+.|+|++
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~ 460 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISR 460 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCS
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCC
Confidence 445889999999999998 78888888888888888888887 344332 2688999999999
Q ss_pred ccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCC
Q 007788 98 NSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDG 151 (589)
Q Consensus 98 N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~ 151 (589)
|+|+ .+|+ ...+++|+.|+|++|+|++.+|..+..+.. .+.+.+|++.|+|+
T Consensus 461 N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 461 NKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9998 7886 567999999999999999999888877654 56789999999986
No 322
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.34 E-value=2.4e-12 Score=139.93 Aligned_cols=92 Identities=28% Similarity=0.381 Sum_probs=86.1
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCC-hhhhhcCCCC
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI-PESLANNAEL 114 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L 114 (589)
+..|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++.+ |..++.+++|
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L 535 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL 535 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC
Confidence 344999999999999999 899999999999999999999996 78 8999999999999999999887 9999999999
Q ss_pred ceeeccCCcCcccCch
Q 007788 115 LFLDVQNNTLSGIVPS 130 (589)
Q Consensus 115 ~~l~l~~N~l~g~~p~ 130 (589)
+.|+|++|+|++.+|.
T Consensus 536 ~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 536 VLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CEEECTTSGGGGSSSC
T ss_pred CEEEecCCcCCCCccH
Confidence 9999999999987764
No 323
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.33 E-value=1.5e-12 Score=118.33 Aligned_cols=96 Identities=28% Similarity=0.326 Sum_probs=86.0
Q ss_pred cccceEEEccCcccc-cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLT-GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.++|+.|+|++|+++ +.+|..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 578999999999999 89999999999999999999999965 789999999999999999998899999999999999
Q ss_pred eccCCcCcccCc-hhHhhcc
Q 007788 118 DVQNNTLSGIVP-SALKRLN 136 (589)
Q Consensus 118 ~l~~N~l~g~~p-~~~~~~~ 136 (589)
+|++|++++..+ ..+..+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~ 120 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLE 120 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCS
T ss_pred eccCCccCcchhHHHHhcCC
Confidence 999999997532 5555443
No 324
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.33 E-value=1e-12 Score=147.36 Aligned_cols=106 Identities=28% Similarity=0.344 Sum_probs=94.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+..|+.|+|++|.+. .+|..+.+|++|+.|+|++|+|+ .+|.+|++|++|+.|+|++|+|+ .+|..|+.|++|+.
T Consensus 221 ~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 297 (727)
T 4b8c_D 221 YDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKY 297 (727)
T ss_dssp -CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSE
T ss_pred ccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCE
Confidence 34899999999999999 88988889999999999999999 89999999999999999999999 88999999999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPG 146 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~ 146 (589)
|+|++|.|+ .+|..+..+.. .+.+.+|+.
T Consensus 298 L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 298 FYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp EECCSSCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred EECCCCCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 999999998 77877776654 455666653
No 325
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.32 E-value=2.5e-12 Score=128.95 Aligned_cols=97 Identities=23% Similarity=0.299 Sum_probs=56.0
Q ss_pred cccceEEEccCcccccCCC-ccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccC-CChhhhhcCCCCce
Q 007788 39 LLCFVVLQLCCNQLTGNIP-AQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFG-TIPESLANNAELLF 116 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p-~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~ 116 (589)
+++|+.|+|++|++++..+ ..+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++ .+|..+..+++|+.
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 5556666666666654433 355556666666666666665555555666666666666666654 35555555666666
Q ss_pred eeccCCcCcccCchhHhhc
Q 007788 117 LDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~ 135 (589)
|+|++|++++..|..+..+
T Consensus 180 L~Ls~n~l~~~~~~~~~~l 198 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSL 198 (306)
T ss_dssp EECTTSCCCEECTTTTTTC
T ss_pred EECCCCCcCCcCHHHhcCC
Confidence 6666666665555554443
No 326
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.32 E-value=2.2e-12 Score=142.16 Aligned_cols=121 Identities=17% Similarity=0.079 Sum_probs=78.0
Q ss_pred ccccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCee
Q 007788 14 GKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRL 93 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 93 (589)
..+..++...|.|...... .+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.+|++|++|++|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 109 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSY--SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENL 109 (606)
T ss_dssp TTCCEEECTTSCCCEECTT--TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEE
T ss_pred CCcCEEECCCCCcCEeChh--hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEE
Confidence 3444445555544432221 23346777777777777776666677777777777777777776667777777777777
Q ss_pred eccCccccCCChhhhhcCCCCceeeccCCcCcc-cCchhHhhcc
Q 007788 94 DLSFNSLFGTIPESLANNAELLFLDVQNNTLSG-IVPSALKRLN 136 (589)
Q Consensus 94 ~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~~~~~~ 136 (589)
+|++|++++..|..++++++|+.|+|++|++++ .+|..+..+.
T Consensus 110 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~ 153 (606)
T 3vq2_A 110 VAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLT 153 (606)
T ss_dssp ECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCT
T ss_pred EccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcC
Confidence 777777775555667777777777777777765 4566665554
No 327
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.32 E-value=2.9e-12 Score=135.98 Aligned_cols=94 Identities=23% Similarity=0.150 Sum_probs=88.0
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|.+|+++++|++|+|++|+|++..+..+..+++|+.
T Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 320 WGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 34899999999999999888999999999999999999999988999999999999999999999766667899999999
Q ss_pred eeccCCcCcccCch
Q 007788 117 LDVQNNTLSGIVPS 130 (589)
Q Consensus 117 l~l~~N~l~g~~p~ 130 (589)
|+|++|++++..|.
T Consensus 400 L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 400 IWLHTNPWDCSCPR 413 (455)
T ss_dssp EECCSSCBCCCTTT
T ss_pred EEccCCCcccCCCc
Confidence 99999999999883
No 328
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.31 E-value=3.2e-12 Score=140.54 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=96.0
Q ss_pred ccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCC
Q 007788 24 NKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGT 103 (589)
Q Consensus 24 ~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 103 (589)
..+|..++. .+++|++|+|++|.+++..|..|+.+++|+.|+|++|.|++..|..|+++++|++|+|++|+|++.
T Consensus 64 ~~lp~~~~~-----~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l 138 (597)
T 3oja_B 64 RKLPAALLD-----SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSL 138 (597)
T ss_dssp SEECTHHHH-----HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcCHHHHc-----cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCC
Confidence 355555443 489999999999999988888999999999999999999988888889999999999999999965
Q ss_pred ChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCC
Q 007788 104 IPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 104 ~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
.|..|..+++|+.|+|++|++++..|..+..+.. .+.+.+|
T Consensus 139 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 139 PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS
T ss_pred CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC
Confidence 5556789999999999999999988887776654 3344444
No 329
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.30 E-value=2.9e-12 Score=130.04 Aligned_cols=93 Identities=22% Similarity=0.195 Sum_probs=69.3
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..++.+++|+.|+|++|+|+ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 56777777777777666677777777777777777777666667777777777777777777 67777777777777777
Q ss_pred cCCcCcccCchhHh
Q 007788 120 QNNTLSGIVPSALK 133 (589)
Q Consensus 120 ~~N~l~g~~p~~~~ 133 (589)
++|++++..+..+.
T Consensus 272 ~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 272 HTNNITKVGVNDFC 285 (332)
T ss_dssp CSSCCCBCCTTSSS
T ss_pred CCCCCCccChhHcc
Confidence 77777766555543
No 330
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.29 E-value=2.7e-12 Score=137.13 Aligned_cols=120 Identities=23% Similarity=0.182 Sum_probs=76.9
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|...... .+..+++|+.|+|++|.+++..|..|+++++|+.|+|++|+|++..+..|+++++|+.|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQD--EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp TCSEEECCSSCCCEECTT--TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCcEEECCCCccceECHh--HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 344444444444432211 233467777777777777766677777777777777777777754444567777777777
Q ss_pred ccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhcc
Q 007788 95 LSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 95 ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 136 (589)
|++|++++..|..|..+++|+.|+|++|++++..|..+..+.
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 152 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLN 152 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCT
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCC
Confidence 777777766666777777777777777777766665555443
No 331
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.29 E-value=8.5e-12 Score=114.27 Aligned_cols=88 Identities=23% Similarity=0.218 Sum_probs=71.3
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChh--hhhcCCCCce
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPE--SLANNAELLF 116 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~ 116 (589)
.++|+.|+|++|+|++. ..|+.+++|+.|+|++|+|++..|..++.+++|+.|+|++|+|+ .+|. .+..+++|+.
T Consensus 41 ~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 41 LDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 34899999999999865 57888999999999999998543344588899999999999986 6776 7888889999
Q ss_pred eeccCCcCcccCch
Q 007788 117 LDVQNNTLSGIVPS 130 (589)
Q Consensus 117 l~l~~N~l~g~~p~ 130 (589)
|+|++|.++. +|.
T Consensus 118 L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 118 LCILRNPVTN-KKH 130 (176)
T ss_dssp EECCSSGGGG-STT
T ss_pred EEecCCCCCC-cHh
Confidence 9999999884 454
No 332
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.28 E-value=7.3e-12 Score=130.10 Aligned_cols=115 Identities=19% Similarity=0.150 Sum_probs=93.8
Q ss_pred cchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCC
Q 007788 25 KIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTI 104 (589)
Q Consensus 25 ~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~ 104 (589)
.+|..++ ..+++|++|+|++|.+++..|..|+.+++|+.|+|++|++++..|..|+++++|+.|+|++|+++...
T Consensus 59 ~l~~~~~-----~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 133 (390)
T 3o6n_A 59 KLPAALL-----DSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 133 (390)
T ss_dssp EECTHHH-----HHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hCChhHh-----cccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCC
Confidence 4555443 34899999999999999877789999999999999999999888888999999999999999999444
Q ss_pred hhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCC
Q 007788 105 PESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 105 p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
+..|..+++|+.|+|++|++++..|..+..+.. .+.+.+|
T Consensus 134 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 134 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred HHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 444688999999999999999888877765543 2344444
No 333
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.27 E-value=1.7e-12 Score=130.55 Aligned_cols=88 Identities=22% Similarity=0.203 Sum_probs=70.3
Q ss_pred cccceEEEccCcccccCCCccc--cCCCCCCeEeccCCcCCccCCccccCC-----CCCCeeeccCccccCCChhhhhcC
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQI--GSLKSLSVLTLQHNRLNGGIPDSLGNL-----GKLKRLDLSFNSLFGTIPESLANN 111 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~--~~l~~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l 111 (589)
+++|+.|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 7788888888888888888765 7788888888888888865 7777776 788888888888887777788888
Q ss_pred CCCceeeccCCcCccc
Q 007788 112 AELLFLDVQNNTLSGI 127 (589)
Q Consensus 112 ~~L~~l~l~~N~l~g~ 127 (589)
++|+.|+|++|++.|.
T Consensus 173 ~~L~~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 173 PALSTLDLSDNPELGE 188 (312)
T ss_dssp SSCCEEECCSCTTCHH
T ss_pred CCCCEEECCCCCcCcc
Confidence 8888888888887765
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.27 E-value=2.1e-12 Score=130.04 Aligned_cols=86 Identities=21% Similarity=0.181 Sum_probs=45.4
Q ss_pred cccceEEEccCcccccCCCccccCC-----CCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCC--Chhhh--h
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSL-----KSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGT--IPESL--A 109 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~--~p~~~--~ 109 (589)
+++|+.|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|+.|+|++|++.|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 55555555555555544 4444444 5555555555555554445555555555555555555543 22333 4
Q ss_pred cCCCCceeeccCCcCc
Q 007788 110 NNAELLFLDVQNNTLS 125 (589)
Q Consensus 110 ~l~~L~~l~l~~N~l~ 125 (589)
.+++|+.|+|++|+++
T Consensus 199 ~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 199 KFPTLQVLALRNAGME 214 (312)
T ss_dssp SCTTCCEEECTTSCCC
T ss_pred cCCCCCEEECCCCcCc
Confidence 5555555555555555
No 335
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.27 E-value=8.5e-12 Score=137.15 Aligned_cols=116 Identities=21% Similarity=0.133 Sum_probs=95.2
Q ss_pred ccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccC
Q 007788 18 VFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSF 97 (589)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~ 97 (589)
.++...|.|...... .+..+++|++|+|++|.|++..|..|+++++|+.|+|++|+|++..|..|+++++|+.|+|++
T Consensus 79 ~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~ 156 (597)
T 3oja_B 79 LLNLNDLQIEEIDTY--AFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSN 156 (597)
T ss_dssp EEECTTSCCCEECTT--TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EEECCCCCCCCCChH--HhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeC
Confidence 345555554433221 234599999999999999998888999999999999999999965555579999999999999
Q ss_pred ccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhc
Q 007788 98 NSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 98 N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 135 (589)
|.|++..|..|..+++|+.|+|++|++++..+..+..+
T Consensus 157 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 194 (597)
T 3oja_B 157 NNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSL 194 (597)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTC
T ss_pred CcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhh
Confidence 99999988899999999999999999998765555444
No 336
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.27 E-value=8.8e-12 Score=126.37 Aligned_cols=92 Identities=33% Similarity=0.408 Sum_probs=51.0
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|.++ .+|..+. ++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 170 l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 170 MKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp CTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 566666666666665 3444332 4555555555555555555555555555555555555554444555555555555
Q ss_pred ccCCcCcccCchhHhh
Q 007788 119 VQNNTLSGIVPSALKR 134 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~ 134 (589)
|++|+++ .+|..+..
T Consensus 247 L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 247 LNNNKLV-KVPGGLAD 261 (330)
T ss_dssp CCSSCCS-SCCTTTTT
T ss_pred CCCCcCc-cCChhhcc
Confidence 5555555 44444433
No 337
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.25 E-value=1.7e-11 Score=114.52 Aligned_cols=103 Identities=15% Similarity=0.219 Sum_probs=70.6
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|.++ .+| .+..+++|+.|+|++|+++ .++.+..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 667777777777777 555 5777777777777777655 334677777777777777777766677777777777777
Q ss_pred ccCCcCcccCchhHhhccC--CccccCCC
Q 007788 119 VQNNTLSGIVPSALKRLNG--GFQFQNNP 145 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~~--~~~~~~n~ 145 (589)
|++|++++..|..+..+.. .+.+.+|.
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 7777777766666665543 23444443
No 338
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.25 E-value=7.6e-12 Score=139.81 Aligned_cols=96 Identities=24% Similarity=0.229 Sum_probs=54.1
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|++|+|++|++++..|..|+++++|++|+|++|++++..+.+|+++++|++|+|++|++++..|..|.++++|+.|
T Consensus 47 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 126 (680)
T 1ziw_A 47 RYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITL 126 (680)
T ss_dssp GGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEE
T ss_pred CCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEE
Confidence 35556666666666665555555556666666666666653333345556666666666665554444555555556666
Q ss_pred eccCCcCcccCchhHh
Q 007788 118 DVQNNTLSGIVPSALK 133 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~ 133 (589)
+|++|++++..|..+.
T Consensus 127 ~Ls~n~l~~~~~~~~~ 142 (680)
T 1ziw_A 127 DLSHNGLSSTKLGTQV 142 (680)
T ss_dssp ECCSSCCSCCCCCSSS
T ss_pred ECCCCcccccCchhhc
Confidence 6666555555554443
No 339
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.24 E-value=5.3e-12 Score=127.29 Aligned_cols=109 Identities=27% Similarity=0.256 Sum_probs=76.2
Q ss_pred hcccceEEEccCcccccCCCccc-cCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQI-GSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
.+++|+.|+|++|.+++..|..+ ..+++|+.|+|++|++++. | ....+++|+.|+|++|+|++ +|+.+..+++|+.
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~ 218 (317)
T 3o53_A 142 CRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTW 218 (317)
T ss_dssp GGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSE
T ss_pred ccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccE
Confidence 37778888888888877666665 3677888888888887743 3 33457888888888888884 4555778888888
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCCCCCCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGD 150 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~ 150 (589)
|+|++|++++ +|..+..+.. .+.+.+|++.|++
T Consensus 219 L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 219 ISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp EECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred EECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcC
Confidence 8888888874 5555544432 3566777777654
No 340
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.24 E-value=7.1e-12 Score=138.04 Aligned_cols=112 Identities=21% Similarity=0.045 Sum_probs=69.2
Q ss_pred ccccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCee
Q 007788 14 GKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRL 93 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L 93 (589)
..+..+|...|.|...... .+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~--~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 110 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNT--TFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHL 110 (606)
T ss_dssp TTCCEEECTTCCCSEECTT--TSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEE
T ss_pred CcCcEEEccCCccCcCChh--HhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEe
Confidence 3444444444444432211 22346667777777777766666667777777777777777766666666677777777
Q ss_pred eccCccccCCChhhhhcCCCCceeeccCCcCccc
Q 007788 94 DLSFNSLFGTIPESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 94 ~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
+|++|++++..|..+.++++|+.|+|++|++++.
T Consensus 111 ~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~ 144 (606)
T 3t6q_A 111 FFIQTGISSIDFIPLHNQKTLESLYLGSNHISSI 144 (606)
T ss_dssp ECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCC
T ss_pred eccccCcccCCcchhccCCcccEEECCCCccccc
Confidence 7777766654455666666666666666666653
No 341
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=2.4e-11 Score=118.91 Aligned_cols=147 Identities=14% Similarity=0.057 Sum_probs=109.5
Q ss_pred HhhccCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEE
Q 007788 306 SATQCFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 306 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 384 (589)
.....|.....++.|+.+.||++... +..+++|+...... .....+.+|.++++.+. |..+.++++++.. .+..+
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~ 86 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERH--DGWSN 86 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE--TTEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEec--CCceE
Confidence 34456777778888888999999865 67899999865321 11235788999998884 6778889888754 46789
Q ss_pred EEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC-------------------------------
Q 007788 385 LIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV------------------------------- 433 (589)
Q Consensus 385 lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~------------------------------- 433 (589)
+||||++|.+|.+.+.. ......++.+++++|+.||+...
T Consensus 87 lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 99999999999876321 11234688999999999997210
Q ss_pred -----------------------CCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 434 -----------------------NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 434 -----------------------~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
..+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 11458999999999999876566799998764
No 342
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.22 E-value=1.7e-11 Score=140.34 Aligned_cols=98 Identities=24% Similarity=0.223 Sum_probs=76.2
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCcc--ccCCCCCCeeeccCccccCCCh-hhhhcCCCC
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDS--LGNLGKLKRLDLSFNSLFGTIP-ESLANNAEL 114 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~--~~~l~~L~~L~ls~N~l~g~~p-~~~~~l~~L 114 (589)
.|++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. |++|++|+.|+|++|++++..| ..|+++++|
T Consensus 71 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L 150 (844)
T 3j0a_A 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSL 150 (844)
T ss_dssp SCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSC
T ss_pred CCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCC
Confidence 3778888888888888777888888888888888888888766665 7788888888888888876644 567888888
Q ss_pred ceeeccCCcCcccCchhHhhc
Q 007788 115 LFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 115 ~~l~l~~N~l~g~~p~~~~~~ 135 (589)
+.|+|++|++++..|..+..+
T Consensus 151 ~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 151 KSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp CEEEEESSCCCCCCSGGGHHH
T ss_pred CEEECCCCcCCeeCHHHcccc
Confidence 888888888887777766554
No 343
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.22 E-value=1.5e-11 Score=134.19 Aligned_cols=95 Identities=20% Similarity=0.248 Sum_probs=89.3
Q ss_pred hhcccceEEEccCcccc-cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 37 VILLCFVVLQLCCNQLT-GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
..+++|+.|+|++|.++ +.+|..++.+++|+.|+|++|++++..|..|+++++|+.|+|++|+|++..|..+..+++|+
T Consensus 442 ~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 521 (570)
T 2z63_A 442 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQ 521 (570)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCc
Confidence 34899999999999998 68999999999999999999999998899999999999999999999988888899999999
Q ss_pred eeeccCCcCcccCchh
Q 007788 116 FLDVQNNTLSGIVPSA 131 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~ 131 (589)
.|++++|.+++..|..
T Consensus 522 ~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 522 KIWLHTNPWDCSCPRI 537 (570)
T ss_dssp EEECCSSCBCCCTTTT
T ss_pred EEEecCCcccCCCcch
Confidence 9999999999988853
No 344
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.21 E-value=9.4e-12 Score=133.12 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=95.9
Q ss_pred Eeeccccccccc----------ccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCc
Q 007788 6 FLDECGIHGKII----------VFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNR 75 (589)
Q Consensus 6 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~ 75 (589)
.|.+|.|++... .++...|.|...++. .+...+++|+.|+|++|.|++. | .+..+++|+.|+|++|+
T Consensus 126 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 126 YLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA-ELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNK 202 (487)
T ss_dssp ECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGG-GGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSC
T ss_pred ECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChH-HHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCC
Confidence 456666665432 124444444433322 1223489999999999999976 3 34569999999999999
Q ss_pred CCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccCCcCc-ccCchhHhhc
Q 007788 76 LNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLS-GIVPSALKRL 135 (589)
Q Consensus 76 l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~-g~~p~~~~~~ 135 (589)
|++ +|+.++.+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.+. +.+|..+..+
T Consensus 203 l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l 261 (487)
T 3oja_A 203 LAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (487)
T ss_dssp CCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTC
T ss_pred CCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhC
Confidence 996 66679999999999999999995 7888999999999999999998 6677666544
No 345
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.21 E-value=1.7e-11 Score=130.09 Aligned_cols=98 Identities=22% Similarity=0.161 Sum_probs=80.3
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++..|..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 56888888888888877888888888888888888888877788888888888888888888666666888888888888
Q ss_pred cCCcCcccCchhHhhccC
Q 007788 120 QNNTLSGIVPSALKRLNG 137 (589)
Q Consensus 120 ~~N~l~g~~p~~~~~~~~ 137 (589)
++|++++..+..+..+..
T Consensus 155 ~~N~l~~~~~~~~~~l~~ 172 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPS 172 (452)
T ss_dssp CSCCCCEECTTTTTTCTT
T ss_pred CCCCcceeCHhHHhcCCc
Confidence 888888766666655543
No 346
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.21 E-value=3.4e-11 Score=125.02 Aligned_cols=99 Identities=23% Similarity=0.252 Sum_probs=87.1
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCcc-ccCCCCCCeeeccCccccCCChhhhhcCCCC
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDS-LGNLGKLKRLDLSFNSLFGTIPESLANNAEL 114 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L 114 (589)
+..+++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|.. |+++++|++|+|++|++++..|..+..+++|
T Consensus 89 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (390)
T 3o6n_A 89 FAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSL 167 (390)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTC
T ss_pred ccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCC
Confidence 344999999999999999888888999999999999999999 56655 6999999999999999998888889999999
Q ss_pred ceeeccCCcCcccCchhHhhc
Q 007788 115 LFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 115 ~~l~l~~N~l~g~~p~~~~~~ 135 (589)
+.|++++|++++.....+..+
T Consensus 168 ~~L~l~~n~l~~~~~~~l~~L 188 (390)
T 3o6n_A 168 QNLQLSSNRLTHVDLSLIPSL 188 (390)
T ss_dssp CEEECCSSCCSBCCGGGCTTC
T ss_pred CEEECCCCcCCcccccccccc
Confidence 999999999997654444433
No 347
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.19 E-value=2.3e-11 Score=132.28 Aligned_cols=96 Identities=27% Similarity=0.306 Sum_probs=73.0
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|+.|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 56788888888888777777888888888888888888777777888888888888888888776667888888888888
Q ss_pred cCCcCccc-CchhHhhc
Q 007788 120 QNNTLSGI-VPSALKRL 135 (589)
Q Consensus 120 ~~N~l~g~-~p~~~~~~ 135 (589)
++|++++. +|..+..+
T Consensus 106 s~n~l~~~~~~~~~~~l 122 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNL 122 (549)
T ss_dssp TTCCCSSSCSSCSCTTC
T ss_pred CCCcccccchhhhhhcc
Confidence 88888753 45444444
No 348
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.19 E-value=1.1e-11 Score=126.94 Aligned_cols=106 Identities=25% Similarity=0.268 Sum_probs=82.0
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
.++|+.|+|++|++++..+..|+++++|+.|+|++|++++..|..|+++++|++|+|++|+|++..+..+..+++|+.|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 35788999999999876666888899999999999999887788888999999999999999865555588889999999
Q ss_pred ccCCcCcccCc-hhHhhccC--CccccCC
Q 007788 119 VQNNTLSGIVP-SALKRLNG--GFQFQNN 144 (589)
Q Consensus 119 l~~N~l~g~~p-~~~~~~~~--~~~~~~n 144 (589)
|++|++++..+ ..+..+.. .+.+.+|
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCC
Confidence 99999885444 34544432 2344454
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.18 E-value=1.2e-11 Score=119.32 Aligned_cols=86 Identities=21% Similarity=0.194 Sum_probs=49.3
Q ss_pred cceEEEccCcccccCCCccccCCCCCCeEeccCCc-CCccCCccccCCCCCCeeeccC-ccccCCChhhhhcCCCCceee
Q 007788 41 CFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNR-LNGGIPDSLGNLGKLKRLDLSF-NSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 41 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+|+.|+|++|++++..+..|+++++|+.|+|++|+ +++..|.+|.++++|+.|+|++ |+|++..|..|..+++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45566666666664444455666666666666664 5543344555666666666665 666544444555566666666
Q ss_pred ccCCcCcc
Q 007788 119 VQNNTLSG 126 (589)
Q Consensus 119 l~~N~l~g 126 (589)
+++|++++
T Consensus 112 l~~n~l~~ 119 (239)
T 2xwt_C 112 IFNTGLKM 119 (239)
T ss_dssp EEEECCCS
T ss_pred CCCCCCcc
Confidence 66666654
No 350
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.18 E-value=3.3e-11 Score=110.36 Aligned_cols=103 Identities=19% Similarity=0.151 Sum_probs=82.2
Q ss_pred hcccceEEEccCcccccCCCccccCCC-CCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLK-SLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
.+.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|+|++. +.|+++++|+.|+|++|+|++..|..+..+++|+.
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 3788999999999999 5665 55554 999999999999964 68999999999999999999655556699999999
Q ss_pred eeccCCcCcccCch--hHhhccC--CccccCCC
Q 007788 117 LDVQNNTLSGIVPS--ALKRLNG--GFQFQNNP 145 (589)
Q Consensus 117 l~l~~N~l~g~~p~--~~~~~~~--~~~~~~n~ 145 (589)
|+|++|+++ .+|. .+..+.. .+.+.+|+
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~ 124 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNP 124 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSG
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCC
Confidence 999999996 4555 5555433 23444443
No 351
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.18 E-value=1.6e-11 Score=123.30 Aligned_cols=97 Identities=19% Similarity=0.144 Sum_probs=78.6
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCcc--CC--ccccCCCCCCeeeccCccccCCChh----hhh
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGG--IP--DSLGNLGKLKRLDLSFNSLFGTIPE----SLA 109 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~--~p--~~~~~l~~L~~L~ls~N~l~g~~p~----~~~ 109 (589)
.+++|++|+|++|++++..|..|+.+++|++|+|++|++.+. +| ..++++++|++|+|++|+|+ .+|. .+.
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 488899999999999888888899999999999999998763 32 23478899999999999997 4454 257
Q ss_pred cCCCCceeeccCCcCcccCchhHhhc
Q 007788 110 NNAELLFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 110 ~l~~L~~l~l~~N~l~g~~p~~~~~~ 135 (589)
.+++|+.|||++|++++..|..+..+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhc
Confidence 78999999999999998877666544
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.18 E-value=2.3e-11 Score=131.32 Aligned_cols=85 Identities=28% Similarity=0.305 Sum_probs=51.5
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccC-CChhhhhcCCCCcee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFG-TIPESLANNAELLFL 117 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~l 117 (589)
+++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+|++|++++ .+|..++++++|+.|
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 120 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEE
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEE
Confidence 566666666666666555556666666666666666666 45544 56666666666666655 355666666666666
Q ss_pred eccCCcCcc
Q 007788 118 DVQNNTLSG 126 (589)
Q Consensus 118 ~l~~N~l~g 126 (589)
+|++|++++
T Consensus 121 ~L~~n~l~~ 129 (520)
T 2z7x_B 121 GLSTTHLEK 129 (520)
T ss_dssp EEEESSCCG
T ss_pred EecCcccch
Confidence 666666654
No 353
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.17 E-value=3e-11 Score=127.57 Aligned_cols=97 Identities=23% Similarity=0.199 Sum_probs=71.6
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..|.+|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45777788888877776677777888888888888877666677777788888888888877555556777777888888
Q ss_pred cCCcCcccCchhHhhcc
Q 007788 120 QNNTLSGIVPSALKRLN 136 (589)
Q Consensus 120 ~~N~l~g~~p~~~~~~~ 136 (589)
++|++++..+..+..+.
T Consensus 144 ~~N~i~~~~~~~~~~l~ 160 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIP 160 (440)
T ss_dssp CSCCCCEECTTTTTTCT
T ss_pred CCCcccccCHHHhhhCc
Confidence 88877766665555443
No 354
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.17 E-value=9.2e-13 Score=123.29 Aligned_cols=103 Identities=21% Similarity=0.323 Sum_probs=84.3
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|++++ +| .++.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|
T Consensus 46 ~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L 120 (198)
T 1ds9_A 46 TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVL 120 (198)
T ss_dssp HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE
T ss_pred cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEE
Confidence 38999999999999996 77 8999999999999999999 789888889999999999999995 56 68889999999
Q ss_pred eccCCcCcccCc-hhHhhccC--CccccCCC
Q 007788 118 DVQNNTLSGIVP-SALKRLNG--GFQFQNNP 145 (589)
Q Consensus 118 ~l~~N~l~g~~p-~~~~~~~~--~~~~~~n~ 145 (589)
+|++|++++..+ ..+..+.. .+.+.+|+
T Consensus 121 ~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 121 YMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred ECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 999999986433 34544432 23445554
No 355
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.17 E-value=3.7e-11 Score=122.97 Aligned_cols=119 Identities=24% Similarity=0.152 Sum_probs=92.1
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeee
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLD 94 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ 94 (589)
.+..++...|.|..... ..+..+++|+.|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 53 ~L~~L~l~~n~i~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 53 AVKSLDLSNNRITYISN--SDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp TCCEEECTTSCCCEECT--TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cCcEEECCCCcCcccCH--HHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 44455555555543222 1234589999999999999988888899999999999999999954444489999999999
Q ss_pred ccCccccCCChh--hhhcCCCCceeeccCC-cCcccCchhHhhcc
Q 007788 95 LSFNSLFGTIPE--SLANNAELLFLDVQNN-TLSGIVPSALKRLN 136 (589)
Q Consensus 95 ls~N~l~g~~p~--~~~~l~~L~~l~l~~N-~l~g~~p~~~~~~~ 136 (589)
|++|+++ .+|. .+..+++|+.|++++| .+++..|..+..+.
T Consensus 131 L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 174 (353)
T 2z80_A 131 LLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT 174 (353)
T ss_dssp CTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred CCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCC
Confidence 9999999 5565 7889999999999999 47766666665543
No 356
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.16 E-value=4.9e-11 Score=130.11 Aligned_cols=95 Identities=27% Similarity=0.189 Sum_probs=71.5
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|+|+ .+|.. .+++|+.|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 56778888888888666677888888888888888888777777888888888888888877 56665 6778888888
Q ss_pred cCCcCcc-cCchhHhhccC
Q 007788 120 QNNTLSG-IVPSALKRLNG 137 (589)
Q Consensus 120 ~~N~l~g-~~p~~~~~~~~ 137 (589)
++|++++ .+|..+..+..
T Consensus 129 s~N~l~~l~~p~~~~~l~~ 147 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTK 147 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTT
T ss_pred CCCCccccCchHhhcccCc
Confidence 8888876 34566665543
No 357
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.15 E-value=9.7e-11 Score=118.63 Aligned_cols=94 Identities=31% Similarity=0.368 Sum_probs=61.4
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|++|+|++|++++..+..|+++++|++|+|++|++++..|.+|+++++|++|+|++|+|+ .+|..+. ++|+.|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45667777777777555556777777777777777777666667777777777777777766 5555443 56666666
Q ss_pred cCCcCcccCchhHhhcc
Q 007788 120 QNNTLSGIVPSALKRLN 136 (589)
Q Consensus 120 ~~N~l~g~~p~~~~~~~ 136 (589)
++|++++..+..+..+.
T Consensus 129 ~~n~l~~~~~~~~~~l~ 145 (330)
T 1xku_A 129 HENEITKVRKSVFNGLN 145 (330)
T ss_dssp CSSCCCBBCHHHHTTCT
T ss_pred CCCcccccCHhHhcCCc
Confidence 66666665555554443
No 358
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.15 E-value=1.7e-12 Score=121.46 Aligned_cols=91 Identities=20% Similarity=0.139 Sum_probs=81.9
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCCh--hhhhcCCC
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIP--ESLANNAE 113 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p--~~~~~l~~ 113 (589)
+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++ +| .++++++|+.|+|++|++++ +| +.+..+++
T Consensus 66 ~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~ 141 (198)
T 1ds9_A 66 LSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDK 141 (198)
T ss_dssp HHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTT
T ss_pred cccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCC
Confidence 345999999999999999 789888889999999999999996 66 79999999999999999994 44 47999999
Q ss_pred CceeeccCCcCcccCch
Q 007788 114 LLFLDVQNNTLSGIVPS 130 (589)
Q Consensus 114 L~~l~l~~N~l~g~~p~ 130 (589)
|+.|++++|++++.+|.
T Consensus 142 L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 142 LEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp CSEEEECSCHHHHHHHT
T ss_pred CCEEEecCCcccccccc
Confidence 99999999999988765
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.14 E-value=1.3e-10 Score=115.60 Aligned_cols=84 Identities=33% Similarity=0.402 Sum_probs=60.5
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|++++. +. ++.+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++ + +.+..+++|+.|
T Consensus 66 ~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L 139 (291)
T 1h6t_A 66 YLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESL 139 (291)
T ss_dssp GCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEE
T ss_pred cCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEE
Confidence 377777888888877754 33 7777777777777777774 43 37777777777777777774 3 457777777777
Q ss_pred eccCCcCccc
Q 007788 118 DVQNNTLSGI 127 (589)
Q Consensus 118 ~l~~N~l~g~ 127 (589)
++++|++++.
T Consensus 140 ~l~~n~l~~~ 149 (291)
T 1h6t_A 140 YLGNNKITDI 149 (291)
T ss_dssp ECCSSCCCCC
T ss_pred EccCCcCCcc
Confidence 7777777754
No 360
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.13 E-value=1.6e-11 Score=123.28 Aligned_cols=123 Identities=19% Similarity=0.122 Sum_probs=87.8
Q ss_pred ccccccccchhhhhhhhhHhhcccceEEEccCcccccC--CC--ccccCCCCCCeEeccCCcCCccCCc----cccCCCC
Q 007788 18 VFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGN--IP--AQIGSLKSLSVLTLQHNRLNGGIPD----SLGNLGK 89 (589)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~--~p--~~~~~l~~L~~L~L~~N~l~g~~p~----~~~~l~~ 89 (589)
.++...|.|...... .+..+++|++|+|++|++.+. ++ ..++.+++|++|+|++|+|+ .+|. .++++++
T Consensus 149 ~L~Ls~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 149 VLSIAQAHSPAFSCE--QVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQ 225 (310)
T ss_dssp EEEEECCSSCCCCTT--SCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCC
T ss_pred EEEeeCCCcchhhHH--HhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCC
Confidence 345555555333221 233489999999999998763 22 23478999999999999998 3444 2578899
Q ss_pred CCeeeccCccccCCChhhhhcC---CCCceeeccCCcCcccCchhHhhccCCccccCC
Q 007788 90 LKRLDLSFNSLFGTIPESLANN---AELLFLDVQNNTLSGIVPSALKRLNGGFQFQNN 144 (589)
Q Consensus 90 L~~L~ls~N~l~g~~p~~~~~l---~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~n 144 (589)
|++|+|++|+|++.+|+.+..+ ++|+.|+|++|+|+ .+|..+..--..+.+.+|
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N 282 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSN 282 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSC
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCC
Confidence 9999999999998888888777 69999999999999 566654321123444444
No 361
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.13 E-value=4.7e-11 Score=129.30 Aligned_cols=88 Identities=24% Similarity=0.283 Sum_probs=45.1
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCC-------CeeeccCccccCCChhhhhcC
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKL-------KRLDLSFNSLFGTIPESLANN 111 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L-------~~L~ls~N~l~g~~p~~~~~l 111 (589)
+++|+.|+|++|+|++ +|. |+ ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+
T Consensus 159 l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l 229 (571)
T 3cvr_A 159 PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSL 229 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGS
T ss_pred CCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcC
Confidence 3445555555555543 444 33 45555555555555 4444 333 44 55555555555 455555555
Q ss_pred CCCceeeccCCcCcccCchhHhhc
Q 007788 112 AELLFLDVQNNTLSGIVPSALKRL 135 (589)
Q Consensus 112 ~~L~~l~l~~N~l~g~~p~~~~~~ 135 (589)
++|+.|+|++|+|++.+|..+..+
T Consensus 230 ~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 230 DPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CTTEEEECCSSSCCHHHHHHHHHH
T ss_pred CCCCEEEeeCCcCCCcCHHHHHHh
Confidence 566666666666665555555443
No 362
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.13 E-value=6.5e-11 Score=119.29 Aligned_cols=112 Identities=19% Similarity=0.181 Sum_probs=90.0
Q ss_pred ccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCcc
Q 007788 20 KEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNS 99 (589)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~ 99 (589)
+...|.|....+. .+...+++|+.|+|++|++++. |. ...+++|+.|+|++|+|+ .+|+.+..+++|+.|+|++|+
T Consensus 150 ~Ls~N~l~~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 150 DLKLNEIDTVNFA-ELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNK 225 (317)
T ss_dssp ECTTSCCCEEEGG-GGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSC
T ss_pred ECCCCCCCcccHH-HHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCc
Confidence 4445555433222 1223489999999999999965 43 446999999999999999 577779999999999999999
Q ss_pred ccCCChhhhhcCCCCceeeccCCcCc-ccCchhHhhcc
Q 007788 100 LFGTIPESLANNAELLFLDVQNNTLS-GIVPSALKRLN 136 (589)
Q Consensus 100 l~g~~p~~~~~l~~L~~l~l~~N~l~-g~~p~~~~~~~ 136 (589)
|+ .+|..+..+++|+.|+|++|+++ +.+|..+..+.
T Consensus 226 l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~ 262 (317)
T 3o53_A 226 LV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262 (317)
T ss_dssp CC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCH
T ss_pred cc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccc
Confidence 99 68999999999999999999999 77777766543
No 363
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.11 E-value=1.4e-10 Score=117.60 Aligned_cols=94 Identities=23% Similarity=0.315 Sum_probs=65.2
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|.+|+++++|++|+|++|+++ .+|..+. ++|+.|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 45777777777777666667777777777777777777666777777777777777777777 5665554 66777777
Q ss_pred cCCcCcccCchhHhhcc
Q 007788 120 QNNTLSGIVPSALKRLN 136 (589)
Q Consensus 120 ~~N~l~g~~p~~~~~~~ 136 (589)
++|++++..+..+..+.
T Consensus 131 ~~n~i~~~~~~~~~~l~ 147 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLR 147 (332)
T ss_dssp CSSCCCCCCSGGGSSCS
T ss_pred CCCccCccCHhHhCCCc
Confidence 77777765555554443
No 364
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.09 E-value=1.2e-10 Score=113.55 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=94.4
Q ss_pred ccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC--ccceeeeeecCCCCeEEEEEEeCCCCCh
Q 007788 318 GKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN--IIRLRGFCCSRGRGECFLIYDFAPKGKL 395 (589)
Q Consensus 318 g~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lv~Ey~~~gsL 395 (589)
+.|..+.||++...+|..+++|...... ...+..|+.+++.+.+.+ +.+++++... .+..++||||++|.+|
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~--~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTE--AGRDWLLLGEVPGQDL 102 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEEC--SSCEEEEEECCSSEET
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccC--CCCCEEEEEecCCccc
Confidence 4556699999988778889999976431 235678888888886444 4557776643 3568999999999888
Q ss_pred HHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC------------------------------------------
Q 007788 396 SKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV------------------------------------------ 433 (589)
Q Consensus 396 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~------------------------------------------ 433 (589)
. ... .+ ...++.++++.|+.||+...
T Consensus 103 ~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 103 L--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp T--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred C--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 4 211 11 23577888888888886430
Q ss_pred -----------CCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 434 -----------NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 434 -----------~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 01239999999999999887667799999865
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.08 E-value=1.5e-10 Score=116.20 Aligned_cols=87 Identities=29% Similarity=0.414 Sum_probs=66.2
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++ +|. ++.+++|+.|+|++|++++ +|. ++++++|+.|+|++|++++ +|. +..+++|+.
T Consensus 104 ~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~ 177 (308)
T 1h6u_A 104 AGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTT 177 (308)
T ss_dssp TTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCE
T ss_pred cCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCE
Confidence 347888888888888885 443 7888888888888888885 333 7788888888888888885 444 778888888
Q ss_pred eeccCCcCcccCc
Q 007788 117 LDVQNNTLSGIVP 129 (589)
Q Consensus 117 l~l~~N~l~g~~p 129 (589)
|+|++|++++..+
T Consensus 178 L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 178 LKADDNKISDISP 190 (308)
T ss_dssp EECCSSCCCCCGG
T ss_pred EECCCCccCcChh
Confidence 8888888876544
No 366
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.07 E-value=8.4e-11 Score=113.27 Aligned_cols=119 Identities=18% Similarity=0.141 Sum_probs=89.4
Q ss_pred ccccccccccccchhhhhhhhhHhhcccceEEEccCcc-cccCCCccccCCCCCCeEeccC-CcCCccCCccccCCCCCC
Q 007788 14 GKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQ-LTGNIPAQIGSLKSLSVLTLQH-NRLNGGIPDSLGNLGKLK 91 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~-l~g~~p~~~~~l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~ 91 (589)
..+..++...|.|...... .+..+++|+.|+|++|. +++..+..|.++++|++|+|++ |+|++..|..|.++++|+
T Consensus 31 ~~l~~L~l~~n~l~~i~~~--~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSH--AFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TTCCEEEEESCCCSEECTT--TTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred CcccEEEEeCCcceEECHH--HccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 3444444444444322211 23348899999999996 8866666899999999999998 999976667889999999
Q ss_pred eeeccCccccCCChhhhhcCCCCc---eeeccCC-cCcccCchhHhhcc
Q 007788 92 RLDLSFNSLFGTIPESLANNAELL---FLDVQNN-TLSGIVPSALKRLN 136 (589)
Q Consensus 92 ~L~ls~N~l~g~~p~~~~~l~~L~---~l~l~~N-~l~g~~p~~~~~~~ 136 (589)
.|+|++|++++ +|+ +..+++|+ .|++++| ++++..+..+..+.
T Consensus 109 ~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~ 155 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLC 155 (239)
T ss_dssp EEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTB
T ss_pred EEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchh
Confidence 99999999995 776 88888888 9999999 88877776666554
No 367
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.07 E-value=4.6e-10 Score=114.39 Aligned_cols=103 Identities=23% Similarity=0.280 Sum_probs=71.0
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|.+++. |. +..+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++ + +.+..+++|+.|
T Consensus 219 ~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L 292 (347)
T 4fmz_A 219 NMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSL 292 (347)
T ss_dssp GCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEE
T ss_pred cCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEE
Confidence 377777777777777743 33 7777777777777777774 3 457777777777777777774 3 356777777777
Q ss_pred eccCCcCcccCchhHhhccC--CccccCCCC
Q 007788 118 DVQNNTLSGIVPSALKRLNG--GFQFQNNPG 146 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~ 146 (589)
++++|++++..|..+..+.. .+.+.+|+.
T Consensus 293 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 293 FLNNNQLGNEDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp ECCSSCCCGGGHHHHHTCTTCSEEECCSSSC
T ss_pred ECcCCcCCCcChhHhhccccCCEEEccCCcc
Confidence 77777777777776665543 344555543
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.07 E-value=2.5e-10 Score=111.64 Aligned_cols=99 Identities=27% Similarity=0.321 Sum_probs=73.6
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+++|+.|+|++|++++. |. ++.+++|+.|+|++|++++ +|... . ++|+.|+|++|+|++ +| .+..+++|+.|
T Consensus 61 ~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L 133 (263)
T 1xeu_A 61 FFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEIL 133 (263)
T ss_dssp GCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEE
T ss_pred hCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEE
Confidence 388899999999999854 44 8889999999999999985 55433 3 888888888888885 44 58888888888
Q ss_pred eccCCcCcccCchhHhhccC--CccccCCC
Q 007788 118 DVQNNTLSGIVPSALKRLNG--GFQFQNNP 145 (589)
Q Consensus 118 ~l~~N~l~g~~p~~~~~~~~--~~~~~~n~ 145 (589)
+|++|++++. | .+..+.. .+.+.+|.
T Consensus 134 ~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 134 SIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp ECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred ECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 8888888865 3 3444432 23445553
No 369
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.06 E-value=3.7e-10 Score=115.81 Aligned_cols=147 Identities=14% Similarity=0.218 Sum_probs=105.2
Q ss_pred cccccccCCCccEEEEEecCCcEEEEEEec--cCCCchHHHHHHHHHHHHhccC--CCCccceeeeeecCCC-CeEEEEE
Q 007788 313 EVNLLGKGNFSSVYKGTLRDGTLVAIRSIN--VTSCKSEEAEFVKGLYLLTSLR--HENIIRLRGFCCSRGR-GECFLIY 387 (589)
Q Consensus 313 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~--~~~~~~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~-~~~~lv~ 387 (589)
..+.|+.|.++.||+....+ ..+++|+.. ..........+.+|.++++.+. +..+.++++++.+... +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998765 577888775 3321122346788999998886 4568888888743311 4578999
Q ss_pred EeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC----------------------------------
Q 007788 388 DFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV---------------------------------- 433 (589)
Q Consensus 388 Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~---------------------------------- 433 (589)
||+++..+.+... ..++...+..++.++++.|+.||+...
T Consensus 121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999987743211 136788889999999999999997311
Q ss_pred -------------------CCCCeEecCCCCCCeeecCCCc--eEEcccccccc
Q 007788 434 -------------------NKPAIVHRNLSVEKVLIDQQFN--PLIADCGLHKL 466 (589)
Q Consensus 434 -------------------~~~~ivH~dlk~~Nill~~~~~--~kl~DfGla~~ 466 (589)
..+.++|||+++.||++++++. +.|.||+.+..
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 0256999999999999997753 58999998764
No 370
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.06 E-value=2.3e-10 Score=123.86 Aligned_cols=73 Identities=32% Similarity=0.354 Sum_probs=40.8
Q ss_pred cceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeecc
Q 007788 41 CFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQ 120 (589)
Q Consensus 41 ~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~ 120 (589)
+|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 55666666666654 444 45556666666666653 554 34555566666666554 444 33 555555555
Q ss_pred CCcCc
Q 007788 121 NNTLS 125 (589)
Q Consensus 121 ~N~l~ 125 (589)
+|+|+
T Consensus 189 ~N~L~ 193 (571)
T 3cvr_A 189 TNLLE 193 (571)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 55555
No 371
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.06 E-value=3.1e-10 Score=112.79 Aligned_cols=100 Identities=29% Similarity=0.375 Sum_probs=74.2
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|++++ +| .++.+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. +.+..+++|+.
T Consensus 87 ~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 160 (291)
T 1h6t_A 87 ANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 160 (291)
T ss_dssp TTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE
Confidence 348888888888888885 34 48888888888888888885 3 4688888888888888888854 57888888888
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
|+|++|++++..| +..+.. .+.+.+|
T Consensus 161 L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 161 LSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEccCCccccchh--hcCCCccCEEECCCC
Confidence 8888888887655 444432 2344444
No 372
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.06 E-value=5.1e-10 Score=112.20 Aligned_cols=85 Identities=27% Similarity=0.413 Sum_probs=61.3
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++ +|. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 7777888888887774 344 7777778888888887774 33 57777777777777777774 443 77777777777
Q ss_pred ccCCcCcccCc
Q 007788 119 VQNNTLSGIVP 129 (589)
Q Consensus 119 l~~N~l~g~~p 129 (589)
|++|++++..+
T Consensus 136 l~~n~l~~~~~ 146 (308)
T 1h6u_A 136 LDLNQITNISP 146 (308)
T ss_dssp CCSSCCCCCGG
T ss_pred CCCCccCcCcc
Confidence 77777776544
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.06 E-value=4.8e-10 Score=122.59 Aligned_cols=86 Identities=30% Similarity=0.387 Sum_probs=50.4
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.|++|+.|+|++|+|++ +| .++.|++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. +.+..+++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 35666666666666653 23 45666666666666666663 2 3456666666666666666643 455566666666
Q ss_pred eccCCcCcccCc
Q 007788 118 DVQNNTLSGIVP 129 (589)
Q Consensus 118 ~l~~N~l~g~~p 129 (589)
+|++|+|++..|
T Consensus 159 ~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 159 SLEDNQISDIVP 170 (605)
T ss_dssp ECCSSCCCCCGG
T ss_pred ECcCCcCCCchh
Confidence 666666665544
No 374
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.05 E-value=2.6e-10 Score=124.93 Aligned_cols=89 Identities=27% Similarity=0.289 Sum_probs=65.2
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+
T Consensus 220 ~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 220 PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 3567777777777774 55 44567777777777777 5665 5677788888888887 6777788888888888
Q ss_pred ccCCcCcccCchhHhhcc
Q 007788 119 VQNNTLSGIVPSALKRLN 136 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~~~ 136 (589)
|++|++++.+|..+..+.
T Consensus 291 L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 291 LEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSCCCCHHHHHHHHHHH
T ss_pred ecCCCCCCcCHHHHHhcc
Confidence 888888877777776654
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.05 E-value=5.3e-10 Score=109.33 Aligned_cols=99 Identities=23% Similarity=0.245 Sum_probs=73.6
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|.++ .+| .++.+++|+.|+|++|+|++ +|+ ++++++|+.|+|++|+|++ +|... . ++|+.
T Consensus 38 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~ 110 (263)
T 1xeu_A 38 KELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSR 110 (263)
T ss_dssp HHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCE
T ss_pred hhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccc-c-CcccE
Confidence 34888999999999888 566 68888999999999999985 444 8888999999999999885 55433 3 88999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
|+|++|++++. | .+..+.. .+.+.+|
T Consensus 111 L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N 138 (263)
T 1xeu_A 111 LFLDNNELRDT-D-SLIHLKNLEILSIRNN 138 (263)
T ss_dssp EECCSSCCSBS-G-GGTTCTTCCEEECTTS
T ss_pred EEccCCccCCC-h-hhcCcccccEEECCCC
Confidence 99999998864 3 3444432 2344444
No 376
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.03 E-value=1.2e-10 Score=120.65 Aligned_cols=88 Identities=22% Similarity=0.232 Sum_probs=42.8
Q ss_pred ccceEEEccCcccc-cCCC---ccccCCCCCCeEeccCCcCC--c---cCCccccCCCCCCeeeccCcccc----CCChh
Q 007788 40 LCFVVLQLCCNQLT-GNIP---AQIGSLKSLSVLTLQHNRLN--G---GIPDSLGNLGKLKRLDLSFNSLF----GTIPE 106 (589)
Q Consensus 40 ~~l~~L~L~~n~l~-g~~p---~~~~~l~~L~~L~L~~N~l~--g---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~ 106 (589)
++|+.|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45555555555554 2333 23444555555555555554 2 23334445555555555555553 34445
Q ss_pred hhhcCCCCceeeccCCcCccc
Q 007788 107 SLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 107 ~~~~l~~L~~l~l~~N~l~g~ 127 (589)
.+..+++|+.|+|++|++++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHH
T ss_pred HHccCCCcCEEECCCCCCchh
Confidence 555555555555555555443
No 377
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.02 E-value=5e-10 Score=122.45 Aligned_cols=101 Identities=27% Similarity=0.285 Sum_probs=81.5
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
+..|++|+.|+|++|+|++ + +.+..|++|+.|+|++|+|++. +.|+.|++|+.|+|++|+|++..| +..+++|+
T Consensus 105 l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 178 (605)
T 1m9s_A 105 LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQ 178 (605)
T ss_dssp STTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCC
T ss_pred hccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCC
Confidence 3448999999999999995 4 4689999999999999999964 679999999999999999997665 89999999
Q ss_pred eeeccCCcCcccCchhHhhccC--CccccCC
Q 007788 116 FLDVQNNTLSGIVPSALKRLNG--GFQFQNN 144 (589)
Q Consensus 116 ~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n 144 (589)
.|+|++|+|++. | .+..+.. .+.+.+|
T Consensus 179 ~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 179 NLYLSKNHISDL-R-ALAGLKNLDVLELFSQ 207 (605)
T ss_dssp EEECCSSCCCBC-G-GGTTCTTCSEEECCSE
T ss_pred EEECcCCCCCCC-h-HHccCCCCCEEEccCC
Confidence 999999999974 3 3444433 2344444
No 378
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.00 E-value=8.8e-11 Score=119.14 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=61.3
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCC-cCCc-cCCccccCCCCCCeeeccCc-cccCC-ChhhhhcCC
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHN-RLNG-GIPDSLGNLGKLKRLDLSFN-SLFGT-IPESLANNA 112 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N-~l~g-~~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~ 112 (589)
..+++|+.|+|++|.+++..|..++.+++|+.|+|++| .+++ .+|..+.++++|+.|+|++| ++++. +|..+..++
T Consensus 115 ~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~ 194 (336)
T 2ast_B 115 SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 194 (336)
T ss_dssp TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred hhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcc
Confidence 33666667777766666666666666666777777666 5664 25555666666777777666 66643 556666666
Q ss_pred -CCceeeccCC--cCc-ccCchhHhhc
Q 007788 113 -ELLFLDVQNN--TLS-GIVPSALKRL 135 (589)
Q Consensus 113 -~L~~l~l~~N--~l~-g~~p~~~~~~ 135 (589)
+|+.|+|++| .++ +.+|..+..+
T Consensus 195 ~~L~~L~l~~~~~~~~~~~l~~~~~~~ 221 (336)
T 2ast_B 195 ETITQLNLSGYRKNLQKSDLSTLVRRC 221 (336)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHC
T ss_pred cCCCEEEeCCCcccCCHHHHHHHHhhC
Confidence 6777777666 344 3444444443
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.00 E-value=5e-10 Score=119.16 Aligned_cols=83 Identities=31% Similarity=0.426 Sum_probs=54.6
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| ++.+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 337 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeE
Confidence 6667777777777774333 6667777777777777765333 6667777777777777775544 56666777777
Q ss_pred ccCCcCccc
Q 007788 119 VQNNTLSGI 127 (589)
Q Consensus 119 l~~N~l~g~ 127 (589)
+++|++++.
T Consensus 338 l~~n~l~~~ 346 (466)
T 1o6v_A 338 FYNNKVSDV 346 (466)
T ss_dssp CCSSCCCCC
T ss_pred CCCCccCCc
Confidence 777766654
No 380
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.98 E-value=2.2e-09 Score=109.36 Aligned_cols=82 Identities=24% Similarity=0.438 Sum_probs=45.2
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++ + +.+..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLN 271 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEE
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEE
Confidence 5555666666665553322 5555566666666666553 332 5555566666666665553 2 3455555666666
Q ss_pred ccCCcCcc
Q 007788 119 VQNNTLSG 126 (589)
Q Consensus 119 l~~N~l~g 126 (589)
+++|++++
T Consensus 272 l~~n~l~~ 279 (347)
T 4fmz_A 272 VGSNQISD 279 (347)
T ss_dssp CCSSCCCC
T ss_pred ccCCccCC
Confidence 66665554
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.96 E-value=1.7e-10 Score=117.06 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=95.8
Q ss_pred ccccccchhhhhhhhhHhhcccceEEEccCc-cccc-CCCccccCCCCCCeEeccCC-cCCcc-CCccccCCC-CCCeee
Q 007788 20 KEFSNKIFVIIFQIQLKVILLCFVVLQLCCN-QLTG-NIPAQIGSLKSLSVLTLQHN-RLNGG-IPDSLGNLG-KLKRLD 94 (589)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n-~l~g-~~p~~~~~l~~L~~L~L~~N-~l~g~-~p~~~~~l~-~L~~L~ 94 (589)
+...+.+...... .+..+++|+.|+|++| .+++ .+|..+.++++|+.|+|++| ++++. +|..+.+++ +|+.|+
T Consensus 124 ~L~~~~l~~~~~~--~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~ 201 (336)
T 2ast_B 124 SLEGLRLSDPIVN--TLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLN 201 (336)
T ss_dssp ECTTCBCCHHHHH--HHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEE
T ss_pred eCcCcccCHHHHH--HHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEE
Confidence 4444444433322 2344899999999999 7886 37778899999999999999 99965 788889999 999999
Q ss_pred ccCc--ccc-CCChhhhhcCCCCceeeccCCc-CcccCchhHhhccC--CccccCCC
Q 007788 95 LSFN--SLF-GTIPESLANNAELLFLDVQNNT-LSGIVPSALKRLNG--GFQFQNNP 145 (589)
Q Consensus 95 ls~N--~l~-g~~p~~~~~l~~L~~l~l~~N~-l~g~~p~~~~~~~~--~~~~~~n~ 145 (589)
|++| .++ +.+|..+..+++|+.|+|++|. +++..+..+..+.. .+.+.+|.
T Consensus 202 l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 202 LSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred eCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 9999 565 5688889999999999999999 77777777766643 23445554
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.96 E-value=1.7e-09 Score=114.63 Aligned_cols=87 Identities=24% Similarity=0.256 Sum_probs=53.7
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+++|+.|+|++|++++ +| ++.+++|+.|+|++|++++. .++.+++|+.|+|++|+|++ +| +..+++|+.|+
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 5566666666666664 34 56666666666666666643 26666666666666666665 45 56666666666
Q ss_pred ccCCcCcccCchhHhh
Q 007788 119 VQNNTLSGIVPSALKR 134 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~ 134 (589)
+++|++++..+..+..
T Consensus 240 l~~N~l~~~~~~~l~~ 255 (457)
T 3bz5_A 240 CSVNPLTELDVSTLSK 255 (457)
T ss_dssp CCSSCCSCCCCTTCTT
T ss_pred eeCCcCCCcCHHHCCC
Confidence 6666666655444433
No 383
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.95 E-value=4.1e-10 Score=115.67 Aligned_cols=95 Identities=24% Similarity=0.201 Sum_probs=69.6
Q ss_pred cccceEEEccCcccccCCC----ccccCCC-CCCeEeccCCcCCccCCccccCC-----CCCCeeeccCccccCCChhhh
Q 007788 39 LLCFVVLQLCCNQLTGNIP----AQIGSLK-SLSVLTLQHNRLNGGIPDSLGNL-----GKLKRLDLSFNSLFGTIPESL 108 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~ 108 (589)
..+|+.|+|++|.+++..+ ..+..++ +|+.|+|++|++++..+..++.+ ++|+.|+|++|+|++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 4558888888888886655 6677777 78888888888887667766665 788888888888887766654
Q ss_pred hcC-----CCCceeeccCCcCcccCchhHh
Q 007788 109 ANN-----AELLFLDVQNNTLSGIVPSALK 133 (589)
Q Consensus 109 ~~l-----~~L~~l~l~~N~l~g~~p~~~~ 133 (589)
... ++|+.|+|++|++++..+..+.
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 130 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFK 130 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHH
Confidence 443 7788888888888776665554
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.94 E-value=6.6e-10 Score=117.61 Aligned_cols=80 Identities=30% Similarity=0.416 Sum_probs=39.8
Q ss_pred cceEEEccCcccccCCCccccCC-CCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 41 CFVVLQLCCNQLTGNIPAQIGSL-KSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 41 ~l~~L~L~~n~l~g~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
+|+.|+|++|++++ +| .+ ++|+.|+|++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|+.|++
T Consensus 298 ~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L 364 (454)
T 1jl5_A 298 NLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHV 364 (454)
T ss_dssp TCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEEC
T ss_pred cCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEEC
Confidence 44445555554443 11 12 355555555555553 4433 355555555555555 3444 2455555555
Q ss_pred cCCcCcc--cCchhHh
Q 007788 120 QNNTLSG--IVPSALK 133 (589)
Q Consensus 120 ~~N~l~g--~~p~~~~ 133 (589)
++|++++ .+|..+.
T Consensus 365 ~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 365 EYNPLREFPDIPESVE 380 (454)
T ss_dssp CSSCCSSCCCCCTTCC
T ss_pred CCCCCCcCCCChHHHH
Confidence 5555555 4454443
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.94 E-value=3.6e-10 Score=117.10 Aligned_cols=133 Identities=15% Similarity=0.145 Sum_probs=101.6
Q ss_pred ccccccccccccch-hhhhhh-hhHhhcccceEEEccCcccc--c---CCCccccCCCCCCeEeccCCcCC----ccCCc
Q 007788 14 GKIIVFKEFSNKIF-VIIFQI-QLKVILLCFVVLQLCCNQLT--G---NIPAQIGSLKSLSVLTLQHNRLN----GGIPD 82 (589)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~l~~L~L~~n~l~--g---~~p~~~~~l~~L~~L~L~~N~l~----g~~p~ 82 (589)
..+..++...|.|. ..+... ..+..+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|+++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 55556666666664 222211 13445889999999999998 4 45558899999999999999997 68999
Q ss_pred cccCCCCCCeeeccCccccCC----Chhhhhc--CCCCceeeccCCcCcc----cCchhH-hhccC--CccccCCCC
Q 007788 83 SLGNLGKLKRLDLSFNSLFGT----IPESLAN--NAELLFLDVQNNTLSG----IVPSAL-KRLNG--GFQFQNNPG 146 (589)
Q Consensus 83 ~~~~l~~L~~L~ls~N~l~g~----~p~~~~~--l~~L~~l~l~~N~l~g----~~p~~~-~~~~~--~~~~~~n~~ 146 (589)
.+..+++|+.|+|++|+|++. +|..+.. +++|+.|+|++|++++ .+|..+ ..+.. .+.+.+|+.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 999999999999999999976 6777744 9999999999999998 477776 33433 345556543
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.92 E-value=1.8e-09 Score=114.18 Aligned_cols=77 Identities=29% Similarity=0.349 Sum_probs=37.7
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeec
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDV 119 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l 119 (589)
++|+.|+|++|++++ +|.. .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ ++|+.|++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L 180 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAA 180 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEEC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEEC
Confidence 455555555555553 2221 1455555555555553 44 35555555555555555553 34322 34555555
Q ss_pred cCCcCcc
Q 007788 120 QNNTLSG 126 (589)
Q Consensus 120 ~~N~l~g 126 (589)
++|++++
T Consensus 181 ~~n~l~~ 187 (454)
T 1jl5_A 181 GNNQLEE 187 (454)
T ss_dssp CSSCCSS
T ss_pred cCCcCCc
Confidence 5555554
No 387
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.91 E-value=3.6e-09 Score=112.44 Aligned_cols=101 Identities=30% Similarity=0.403 Sum_probs=83.2
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+++|+.|+|++|.+++..| ++.+++|+.|+|++|++++. |. +..+++|+.|+|++|++++..| +..+++|+.
T Consensus 240 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 313 (466)
T 1o6v_A 240 ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTY 313 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSE
T ss_pred hcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCE
Confidence 448999999999999997655 89999999999999999964 43 8999999999999999997544 889999999
Q ss_pred eeccCCcCcccCchhHhhccC--CccccCCC
Q 007788 117 LDVQNNTLSGIVPSALKRLNG--GFQFQNNP 145 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~ 145 (589)
|+|++|++++..| +..+.. .+.+.+|.
T Consensus 314 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 314 LTLYFNNISDISP--VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCCEEECCSSC
T ss_pred EECcCCcCCCchh--hccCccCCEeECCCCc
Confidence 9999999998876 444332 34555553
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.89 E-value=4e-09 Score=115.54 Aligned_cols=73 Identities=33% Similarity=0.434 Sum_probs=43.5
Q ss_pred CCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--Cccc
Q 007788 64 KSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQF 141 (589)
Q Consensus 64 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~ 141 (589)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+.. .+.+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 456666666666663 55 34466666666666666 4554 4566777777777777 55666655543 2344
Q ss_pred cCCC
Q 007788 142 QNNP 145 (589)
Q Consensus 142 ~~n~ 145 (589)
.+|+
T Consensus 292 ~~N~ 295 (622)
T 3g06_A 292 EGNP 295 (622)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 5554
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.89 E-value=8.9e-10 Score=112.55 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=80.5
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCc-cccCCCCCCe-eeccCccccCCChhhhhcCCCCce
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPD-SLGNLGKLKR-LDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~-~~~~l~~L~~-L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
.++|+.|+|++|+|+...+..|++|++|+.|+|++|++.+.+|. +|.+|++|.. +++++|+|++..|..|..+++|+.
T Consensus 29 ~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~ 108 (350)
T 4ay9_X 29 PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 108 (350)
T ss_dssp CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCE
T ss_pred CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccc
Confidence 35799999999999955456899999999999999999877775 6789998875 677789999777889999999999
Q ss_pred eeccCCcCcccCchhH
Q 007788 117 LDVQNNTLSGIVPSAL 132 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~ 132 (589)
|++++|++++..+..+
T Consensus 109 L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 109 LLISNTGIKHLPDVHK 124 (350)
T ss_dssp EEEEEECCSSCCCCTT
T ss_pred ccccccccccCCchhh
Confidence 9999999997666544
No 390
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.87 E-value=3.4e-09 Score=112.20 Aligned_cols=86 Identities=23% Similarity=0.186 Sum_probs=69.2
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCC-----
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNA----- 112 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~----- 112 (589)
.+++|+.|+|++|++++. .++.+++|+.|+|++|+|++ +| ++.+++|+.|+|++|+|++..+..+.++.
T Consensus 189 ~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCI 262 (457)
T ss_dssp TCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECT
T ss_pred cCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEecc
Confidence 488999999999999965 38899999999999999997 77 88999999999999999986555554444
Q ss_pred --CCceeeccCCcCcccCc
Q 007788 113 --ELLFLDVQNNTLSGIVP 129 (589)
Q Consensus 113 --~L~~l~l~~N~l~g~~p 129 (589)
+|+.|++++|++.|.+|
T Consensus 263 ~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 263 QTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp TCCCSCCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCccc
Confidence 45666666666666666
No 391
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=1.6e-09 Score=108.25 Aligned_cols=192 Identities=16% Similarity=0.158 Sum_probs=119.9
Q ss_pred ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCC--ccceeeeeecCC-CCeEEEEEEe
Q 007788 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HEN--IIRLRGFCCSRG-RGECFLIYDF 389 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~-~~~~~lv~Ey 389 (589)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+..... ....|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3568899999999864 45888875432 33467889999998873 332 334444332111 1234889999
Q ss_pred CCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCC-------------------------------------
Q 007788 390 APKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSE------------------------------------- 432 (589)
Q Consensus 390 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------- 432 (589)
++|.+|.+.... .++..++..++.++++.|+.||+..
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999888654321 2566777788888888888888521
Q ss_pred ----------------CCCCCeEecCCCCCCeeecC--CCceEEccccccccccCCceeeeecC----Ccc-------cc
Q 007788 433 ----------------VNKPAIVHRNLSVEKVLIDQ--QFNPLIADCGLHKLLADDIVFSVLKT----SAA-------MG 483 (589)
Q Consensus 433 ----------------~~~~~ivH~dlk~~Nill~~--~~~~kl~DfGla~~~~~~~~~~~~~~----~~~-------~~ 483 (589)
...+.++|+|+++.||++++ +..+.|.||+.+.............. .+. .+
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 11345899999999999998 45678999998765332110000000 000 00
Q ss_pred c--cC-cccccCCCCCCcchhhhHHHHHHHHHhCCCCcch
Q 007788 484 Y--LA-PEYVTTGRFTERSDIFAFGVIILQILTGSLVLTS 520 (589)
Q Consensus 484 y--~a-PE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~ 520 (589)
| .. |+... ......+.|++|.++|++.+|..++..
T Consensus 252 Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 252 YKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 1 11 11111 011235899999999999999877643
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.79 E-value=3.1e-09 Score=109.03 Aligned_cols=129 Identities=19% Similarity=0.129 Sum_probs=97.0
Q ss_pred eEEeecccccccccc----------cccccccchhhhhhh--hhHhhcc-cceEEEccCcccccCCCccccCC-----CC
Q 007788 4 FYFLDECGIHGKIIV----------FKEFSNKIFVIIFQI--QLKVILL-CFVVLQLCCNQLTGNIPAQIGSL-----KS 65 (589)
Q Consensus 4 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~--~~~~~l~-~l~~L~L~~n~l~g~~p~~~~~l-----~~ 65 (589)
|+.|..|++++.+.. +|...|.|....... ..+..++ +|+.|+|++|++++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 566777777765433 355555554332210 1334467 89999999999998888888775 99
Q ss_pred CCeEeccCCcCCccCCccccC----C-CCCCeeeccCccccCCChhhhhc-----CCCCceeeccCCcCcccCchhH
Q 007788 66 LSVLTLQHNRLNGGIPDSLGN----L-GKLKRLDLSFNSLFGTIPESLAN-----NAELLFLDVQNNTLSGIVPSAL 132 (589)
Q Consensus 66 L~~L~L~~N~l~g~~p~~~~~----l-~~L~~L~ls~N~l~g~~p~~~~~-----l~~L~~l~l~~N~l~g~~p~~~ 132 (589)
|+.|+|++|++++..+..++. + ++|+.|+|++|+|++..+..+.. .++|+.|+|++|+++...+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 999999999999877775554 4 89999999999999877766554 3699999999999997555444
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=6.8e-09 Score=100.66 Aligned_cols=83 Identities=23% Similarity=0.235 Sum_probs=56.4
Q ss_pred EEccCcccc---cCCCccccCCCCCCeEeccCCcCCc--cCCccccCCCCCCeeeccCccccCCChhhhhcCC--CCcee
Q 007788 45 LQLCCNQLT---GNIPAQIGSLKSLSVLTLQHNRLNG--GIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNA--ELLFL 117 (589)
Q Consensus 45 L~L~~n~l~---g~~p~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~l 117 (589)
++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 566777333 2222233567788888888888887 5666777788888888888888754 3344444 78888
Q ss_pred eccCCcCcccCc
Q 007788 118 DVQNNTLSGIVP 129 (589)
Q Consensus 118 ~l~~N~l~g~~p 129 (589)
+|++|.+++.+|
T Consensus 226 ~L~~Npl~~~~~ 237 (267)
T 3rw6_A 226 WLDGNSLCDTFR 237 (267)
T ss_dssp ECTTSTTGGGCS
T ss_pred EccCCcCccccC
Confidence 888888877666
No 394
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.72 E-value=6.7e-09 Score=105.99 Aligned_cols=119 Identities=18% Similarity=0.093 Sum_probs=88.0
Q ss_pred ccccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCc-cccCCCCCCe-EeccCCcCCccCCccccCCCCCC
Q 007788 14 GKIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPA-QIGSLKSLSV-LTLQHNRLNGGIPDSLGNLGKLK 91 (589)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~-~~~~l~~L~~-L~L~~N~l~g~~p~~~~~l~~L~ 91 (589)
..+..++...|+|..... ..+..|++|+.|+|++|++.+.+|. .|.++++|+. +++++|+|++..|..|.++++|+
T Consensus 30 ~~l~~L~Ls~N~i~~i~~--~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~ 107 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQK--GAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQ 107 (350)
T ss_dssp TTCSEEEEESCCCSEECT--TSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCC
T ss_pred CCCCEEEccCCcCCCcCH--HHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccc
Confidence 345556666666542221 1234599999999999999877775 7899999875 67788999987788999999999
Q ss_pred eeeccCccccCCChhhhhcCCCCceeeccC-CcCcccCchhHhh
Q 007788 92 RLDLSFNSLFGTIPESLANNAELLFLDVQN-NTLSGIVPSALKR 134 (589)
Q Consensus 92 ~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~-N~l~g~~p~~~~~ 134 (589)
.|++++|+|++..+..+....++..|++.+ |++....+..+..
T Consensus 108 ~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~ 151 (350)
T 4ay9_X 108 YLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151 (350)
T ss_dssp EEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTT
T ss_pred cccccccccccCCchhhcccchhhhhhhccccccccccccchhh
Confidence 999999999976666666677777888754 5666444444443
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.68 E-value=3.7e-09 Score=102.50 Aligned_cols=80 Identities=28% Similarity=0.309 Sum_probs=65.8
Q ss_pred hhcccceEEEccCccccc--CCCccccCCCCCCeEeccCCcCCccCCccccCCC--CCCeeeccCccccCCChh------
Q 007788 37 VILLCFVVLQLCCNQLTG--NIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLG--KLKRLDLSFNSLFGTIPE------ 106 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~--~L~~L~ls~N~l~g~~p~------ 106 (589)
..+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+++.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 458899999999999997 5667788899999999999999964 4455555 899999999999987763
Q ss_pred -hhhcCCCCceee
Q 007788 107 -SLANNAELLFLD 118 (589)
Q Consensus 107 -~~~~l~~L~~l~ 118 (589)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 467788888887
No 396
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66 E-value=1.2e-07 Score=95.45 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=98.5
Q ss_pred cCccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCC----CCccceeeeeecCCCCeEEE
Q 007788 310 CFSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH----ENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 310 ~f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H----~niv~l~g~~~~~~~~~~~l 385 (589)
.....+.++.|....||+. |..+++|+... ......+..|.+++..+.+ ..+.+++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~------~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ------SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE------CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec------CCcEE
Confidence 4555678999999999998 56688887643 2223568889988888865 223444443 34589
Q ss_pred EEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC--------------------------------
Q 007788 386 IYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV-------------------------------- 433 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-------------------------------- 433 (589)
||||++|.++...... .++...+..++.++++.|+.||+...
T Consensus 105 vme~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 105 IMKYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 9999999888643311 25566677778888888888885332
Q ss_pred --------------------------CCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 434 --------------------------NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 434 --------------------------~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
..+.++|+|+++.||+++++..+.|.||+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 123469999999999999976679999998754
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.65 E-value=8.9e-09 Score=109.06 Aligned_cols=88 Identities=26% Similarity=0.232 Sum_probs=41.5
Q ss_pred cccceEEEccCcccccCCCccc-cCCC----CCCeEeccCCcCCc----cCCccccCCCCCCeeeccCccccCCChhhhh
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQI-GSLK----SLSVLTLQHNRLNG----GIPDSLGNLGKLKRLDLSFNSLFGTIPESLA 109 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~-~~l~----~L~~L~L~~N~l~g----~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~ 109 (589)
+++|+.|+|++|.++...+..+ ..++ +|+.|+|++|+++. .+|..+.++++|+.|+|++|.+++..+..+.
T Consensus 55 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 134 (461)
T 1z7x_W 55 NPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLC 134 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHH
Confidence 4555555555555543322222 2233 45555555555552 3455555555555555555555433333222
Q ss_pred c-----CCCCceeeccCCcCcc
Q 007788 110 N-----NAELLFLDVQNNTLSG 126 (589)
Q Consensus 110 ~-----l~~L~~l~l~~N~l~g 126 (589)
. +++|+.|+|++|++++
T Consensus 135 ~~l~~~~~~L~~L~L~~n~l~~ 156 (461)
T 1z7x_W 135 EGLLDPQCRLEKLQLEYCSLSA 156 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHhcCCCcceEEECCCCCCCH
Confidence 2 2345555555555554
No 398
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.64 E-value=4.1e-09 Score=111.71 Aligned_cols=94 Identities=23% Similarity=0.150 Sum_probs=54.2
Q ss_pred cccceEEEccCcccccC----CCccccCCCCCCeEeccCCcCCccCCccccC-----CCCCCeeeccCccccCC----Ch
Q 007788 39 LLCFVVLQLCCNQLTGN----IPAQIGSLKSLSVLTLQHNRLNGGIPDSLGN-----LGKLKRLDLSFNSLFGT----IP 105 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p 105 (589)
+++|+.|+|++|+++.. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 55666666666666643 4555566666666666666665433333332 24666666666666644 44
Q ss_pred hhhhcCCCCceeeccCCcCcccCchhH
Q 007788 106 ESLANNAELLFLDVQNNTLSGIVPSAL 132 (589)
Q Consensus 106 ~~~~~l~~L~~l~l~~N~l~g~~p~~~ 132 (589)
..+..+++|+.|+|++|++++..+..+
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l 361 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVREL 361 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHH
T ss_pred HHHhhCCCccEEEccCCccccccHHHH
Confidence 555556666666666666655444433
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.60 E-value=1.3e-08 Score=104.55 Aligned_cols=112 Identities=19% Similarity=0.135 Sum_probs=77.5
Q ss_pred cccccccccccchhhhhhhhhHhhcccceEEEccCcccccCCCccc-----cCCCCCCeEeccCCcCCc----cCCcccc
Q 007788 15 KIIVFKEFSNKIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQI-----GSLKSLSVLTLQHNRLNG----GIPDSLG 85 (589)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~-----~~l~~L~~L~L~~N~l~g----~~p~~~~ 85 (589)
.+..+|...|.|...-.. .+...+.+|+.|+|++|+|+..-...+ ...++|+.|+|++|+|+. .++..+.
T Consensus 102 ~L~~L~Ls~n~l~~~~~~-~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLR-TLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp CEEEEECTTCCCCHHHHH-HTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CceEEEecCCCCCHHHHH-HHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 444556666666433222 234447788888888888875433333 346788888999888874 3555667
Q ss_pred CCCCCCeeeccCccccCC----ChhhhhcCCCCceeeccCCcCccc
Q 007788 86 NLGKLKRLDLSFNSLFGT----IPESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 86 ~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
.+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 788888999998888742 355677778888899998888754
No 400
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.52 E-value=2.8e-07 Score=90.97 Aligned_cols=144 Identities=16% Similarity=0.200 Sum_probs=93.0
Q ss_pred cccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCC---CccceeeeeecCCCCeEEEEEEe
Q 007788 313 EVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE---NIIRLRGFCCSRGRGECFLIYDF 389 (589)
Q Consensus 313 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~Ey 389 (589)
..+.|+.|.++.||++...+|+.++||+..... ......|..|.+.|+.+++. .+.+++++. ..++||||
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------~~~lvme~ 91 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAMEW 91 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEEEC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------CcEEEEEe
Confidence 356799999999999999899999999965432 22235689999999999865 577777653 25899999
Q ss_pred CCCCChHH-----------HhhhhcCC-----------------CCCCCHHHHH---HH-----------------HHHH
Q 007788 390 APKGKLSK-----------YLDQEEGS-----------------SNVLDWSTRV---SI-----------------IIGI 421 (589)
Q Consensus 390 ~~~gsL~~-----------~l~~~~~~-----------------~~~l~~~~~~---~i-----------------~~~i 421 (589)
++++.+.. .||..... ...-+|.... ++ ...+
T Consensus 92 l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~ 171 (288)
T 3d1u_A 92 VDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLV 171 (288)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHH
T ss_pred cccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 99987531 12332111 0012454321 00 1111
Q ss_pred HHHhHHhcC--CCCCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 422 AKGIGYLHS--SEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 422 a~~L~~LH~--~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
-+.++.|.. .....+.++|+|+.+.||++++ +.+.|.|| .+.
T Consensus 172 ~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 172 EKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 122222321 0123577999999999999998 45889999 554
No 401
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.46 E-value=9.5e-07 Score=88.11 Aligned_cols=139 Identities=22% Similarity=0.144 Sum_probs=92.4
Q ss_pred ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCC---CccceeeeeecCCCCeEEEEEEeC
Q 007788 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHE---NIIRLRGFCCSRGRGECFLIYDFA 390 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~~~lv~Ey~ 390 (589)
.+.++.|....||+. |..+++|+-.. ......+..|.+++..+.+. .+.+++.++.. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~-~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-TTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-CCCceEEEEecc
Confidence 355788888899987 46678887421 23446788999999998753 35566666532 245678999999
Q ss_pred CCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC-------------------------------------
Q 007788 391 PKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV------------------------------------- 433 (589)
Q Consensus 391 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~------------------------------------- 433 (589)
+|..+.+.... .++...+..++.++++.|+.||+...
T Consensus 96 ~G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 96 QGQILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CSEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred CCeECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 99888663211 13344445555555555555553210
Q ss_pred ------------------CCCCeEecCCCCCCeeecC---CCce-EEcccccccc
Q 007788 434 ------------------NKPAIVHRNLSVEKVLIDQ---QFNP-LIADCGLHKL 466 (589)
Q Consensus 434 ------------------~~~~ivH~dlk~~Nill~~---~~~~-kl~DfGla~~ 466 (589)
..+.++|+|+++.||+++. ++.+ .|.||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999997 4554 7999997653
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.45 E-value=4.7e-08 Score=100.37 Aligned_cols=116 Identities=20% Similarity=0.188 Sum_probs=86.2
Q ss_pred ccccccccchhhhhhhhhH----hhcccceEEEccCccccc----CCCccccCCCCCCeEeccCCcCCc----cCCcccc
Q 007788 18 VFKEFSNKIFVIIFQIQLK----VILLCFVVLQLCCNQLTG----NIPAQIGSLKSLSVLTLQHNRLNG----GIPDSLG 85 (589)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~----~~l~~l~~L~L~~n~l~g----~~p~~~~~l~~L~~L~L~~N~l~g----~~p~~~~ 85 (589)
.+|...|.|...-.. .+. ...++|+.|+|++|.|+. .++..+..+++|++|+|++|+|+. .++..+.
T Consensus 130 ~L~Ls~n~l~~~~~~-~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~ 208 (372)
T 3un9_A 130 KLGLQLNSLGPEACK-DLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLD 208 (372)
T ss_dssp EEECCSSCCCHHHHH-HHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGG
T ss_pred HhhcCCCCCCHHHHH-HHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHh
Confidence 346666666433221 111 125789999999999975 255566889999999999999985 3466778
Q ss_pred CCCCCCeeeccCccccCC----ChhhhhcCCCCceeeccCCcCcccCchhHhh
Q 007788 86 NLGKLKRLDLSFNSLFGT----IPESLANNAELLFLDVQNNTLSGIVPSALKR 134 (589)
Q Consensus 86 ~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~ 134 (589)
.+++|+.|+|++|+|+.. ++..+..+++|+.|||++|.|+..-...+..
T Consensus 209 ~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 209 RNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp GCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred cCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 889999999999999853 4556667899999999999998655445544
No 403
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=1.7e-06 Score=84.38 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=93.5
Q ss_pred ccccCCCc-cEEEEEec-CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEEEEEEeCCC
Q 007788 316 LLGKGNFS-SVYKGTLR-DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFLIYDFAPK 392 (589)
Q Consensus 316 ~lg~G~~g-~Vy~~~~~-~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~lv~Ey~~~ 392 (589)
.+..|..| .||+.... ++..+++|+-.. ....++..|...|+.+. +--+.++++++.+ .+..++|||++++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~--~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT--PDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE--TTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE--CCeEEEEEEeeCC
Confidence 35556555 58988765 467788898653 23456788988888774 3346677887744 3678999999999
Q ss_pred CChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCC---------------------------------------
Q 007788 393 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEV--------------------------------------- 433 (589)
Q Consensus 393 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~--------------------------------------- 433 (589)
.++.+...... ..+..++.+++..|+.||+...
T Consensus 105 ~~~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 105 KTAFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp EEHHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred ccccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 88876653211 1223455666666666664210
Q ss_pred --------------CCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 434 --------------NKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 434 --------------~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
..+.++|+|+.+.|||+++++.+-|.||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 12347999999999999987777799999765
No 404
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.29 E-value=2.1e-06 Score=87.67 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=90.2
Q ss_pred ccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC--ccceeeeeecCCCCeEEEEEEe
Q 007788 312 SEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN--IIRLRGFCCSRGRGECFLIYDF 389 (589)
Q Consensus 312 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~~~~~~~lv~Ey 389 (589)
...+.++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++.... +..++||||
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-g~~~lv~e~ 115 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-SLTYCISRR 115 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-SCEEEEEEC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-CCeEEEEEe
Confidence 3456788999999999886 5788899987432 24778888888886433 456666664332 568999999
Q ss_pred CCCCChHHH------------------hhhhcCCC----------------------------CCCCHHHH------HHH
Q 007788 390 APKGKLSKY------------------LDQEEGSS----------------------------NVLDWSTR------VSI 417 (589)
Q Consensus 390 ~~~gsL~~~------------------l~~~~~~~----------------------------~~l~~~~~------~~i 417 (589)
+++.++.+. ||...... ....|... ...
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 998655321 11111000 00112111 011
Q ss_pred HHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccc
Q 007788 418 IIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLL 467 (589)
Q Consensus 418 ~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~ 467 (589)
...+...++++.... ..+.++|+|+++.||+++++..+.|.||+.+..-
T Consensus 196 ~~~~~~l~~~l~~lp-~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 196 AQALDELMLWAEDCP-EVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHGGGCC-CCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhhCC-CCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 112222223332211 2356899999999999988777889999987653
No 405
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=2.2e-06 Score=86.43 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=80.7
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCC-eeeccCccccCCChhhhhcCCCCce
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLK-RLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
.+++|+.|+|++|+++...+..|.+|++|+.|+|.+| ++..-+.+|.+|++|+ .|+|++ +++..-+.+|.++++|+.
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp HCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred hcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 4899999999999999554568999999999999999 8855566899999999 999999 777455688999999999
Q ss_pred eeccCCcCcccCchhHhh
Q 007788 117 LDVQNNTLSGIVPSALKR 134 (589)
Q Consensus 117 l~l~~N~l~g~~p~~~~~ 134 (589)
|++++|+++...+.+|..
T Consensus 302 l~l~~n~i~~I~~~aF~~ 319 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGN 319 (329)
T ss_dssp EEECSSCCCEECTTTTCT
T ss_pred EEeCCCccCccchhhhcC
Confidence 999999999665555543
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.10 E-value=5.9e-07 Score=98.18 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=53.2
Q ss_pred cccceEEEcc----CcccccC-----CCccccCCCCCCeEeccC--CcCCccCCccccC-CCCCCeeeccCccccC-CCh
Q 007788 39 LLCFVVLQLC----CNQLTGN-----IPAQIGSLKSLSVLTLQH--NRLNGGIPDSLGN-LGKLKRLDLSFNSLFG-TIP 105 (589)
Q Consensus 39 l~~l~~L~L~----~n~l~g~-----~p~~~~~l~~L~~L~L~~--N~l~g~~p~~~~~-l~~L~~L~ls~N~l~g-~~p 105 (589)
+++|+.|+|+ +|++++. ++..+.++++|+.|+|++ |.+++..+..++. +++|+.|+|++|++++ .++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 6666666664 5666643 333355566666666653 2355554444443 6677777777777765 344
Q ss_pred hhhhcCCCCceeeccCCcCccc
Q 007788 106 ESLANNAELLFLDVQNNTLSGI 127 (589)
Q Consensus 106 ~~~~~l~~L~~l~l~~N~l~g~ 127 (589)
..+..+++|+.|+|++|++++.
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHhcCcccCeeeccCCCCcHH
Confidence 4556667777777777776543
No 407
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=1e-06 Score=80.84 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=69.2
Q ss_pred hHhhcccceEEEccCc-ccccC----CCccccCCCCCCeEeccCCcCCcc----CCccccCCCCCCeeeccCccccCC--
Q 007788 35 LKVILLCFVVLQLCCN-QLTGN----IPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFNSLFGT-- 103 (589)
Q Consensus 35 ~~~~l~~l~~L~L~~n-~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~-- 103 (589)
.....++|+.|+|++| .++.. +...+...++|++|+|++|+|+.. +...+...+.|++|+|++|+|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3344778999999998 87632 345567778899999999988742 444555668899999999988753
Q ss_pred --ChhhhhcCCCCceeec--cCCcCccc
Q 007788 104 --IPESLANNAELLFLDV--QNNTLSGI 127 (589)
Q Consensus 104 --~p~~~~~l~~L~~l~l--~~N~l~g~ 127 (589)
+...+...++|+.|+| ++|.+...
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 4566777788999999 78888754
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08 E-value=4.5e-06 Score=85.02 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=53.4
Q ss_pred ccc-ccCCCccEEEEEec-------CCcEEEEEEeccCCC--chHHHHHHHHHHHHhccC-C--CCccceeeeeecCC-C
Q 007788 315 NLL-GKGNFSSVYKGTLR-------DGTLVAIRSINVTSC--KSEEAEFVKGLYLLTSLR-H--ENIIRLRGFCCSRG-R 380 (589)
Q Consensus 315 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~l~~~~~--~~~~~~~~~e~~~l~~l~-H--~niv~l~g~~~~~~-~ 380 (589)
+.| +.|....+|+.... ++..+++|+...... ......+..|..+++.+. + -.+.++++++.+.. .
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 78888999998765 267788887654320 001134667777777764 2 35667777763321 1
Q ss_pred CeEEEEEEeCCCCChHH
Q 007788 381 GECFLIYDFAPKGKLSK 397 (589)
Q Consensus 381 ~~~~lv~Ey~~~gsL~~ 397 (589)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999877653
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=1.2e-06 Score=80.50 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=64.5
Q ss_pred cccceEEEccCcccccC----CCccccCCCCCCeEeccCCcCCcc----CCccccCCCCCCeeec--cCccccCC----C
Q 007788 39 LLCFVVLQLCCNQLTGN----IPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDL--SFNSLFGT----I 104 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l--s~N~l~g~----~ 104 (589)
.++|+.|+|++|.|+.. +...+...++|+.|+|++|+|+.. +..++...++|+.|+| ++|.|+.. +
T Consensus 64 ~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l 143 (185)
T 1io0_A 64 NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI 143 (185)
T ss_dssp CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH
T ss_pred CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH
Confidence 57788888888888632 334455667888888888888743 5566777788888888 77888743 3
Q ss_pred hhhhhcCCCCceeeccCCcCc
Q 007788 105 PESLANNAELLFLDVQNNTLS 125 (589)
Q Consensus 105 p~~~~~l~~L~~l~l~~N~l~ 125 (589)
...+...++|+.|+|++|.+.
T Consensus 144 ~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 144 ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEeccCCCCC
Confidence 445666788888888888875
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.07 E-value=8.5e-07 Score=96.93 Aligned_cols=92 Identities=15% Similarity=0.057 Sum_probs=75.7
Q ss_pred HhhcccceEEEccC--cccccCCCccccC-CCCCCeEeccCCcCCc-cCCccccCCCCCCeeeccCccccCC-Chhhhhc
Q 007788 36 KVILLCFVVLQLCC--NQLTGNIPAQIGS-LKSLSVLTLQHNRLNG-GIPDSLGNLGKLKRLDLSFNSLFGT-IPESLAN 110 (589)
Q Consensus 36 ~~~l~~l~~L~L~~--n~l~g~~p~~~~~-l~~L~~L~L~~N~l~g-~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~ 110 (589)
...+++|+.|+|++ |.+++..+..++. +++|+.|+|++|++++ .+|..+.++++|+.|+|++|.|++. ++..+..
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~ 511 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTK 511 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHH
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHh
Confidence 44599999999985 3477666665554 8999999999999997 4566678899999999999999865 4555677
Q ss_pred CCCCceeeccCCcCccc
Q 007788 111 NAELLFLDVQNNTLSGI 127 (589)
Q Consensus 111 l~~L~~l~l~~N~l~g~ 127 (589)
+++|+.|+|++|+++..
T Consensus 512 l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 512 LPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CSSCCEEEEESCBCCTT
T ss_pred cCccCeeECcCCcCCHH
Confidence 99999999999999864
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.89 E-value=4.6e-06 Score=84.94 Aligned_cols=64 Identities=19% Similarity=0.248 Sum_probs=36.1
Q ss_pred CCCCCCeEeccCCcCCccCCcccc---CCCCCCeeeccCccccCC----ChhhhhcCCCCceeeccCCcCc
Q 007788 62 SLKSLSVLTLQHNRLNGGIPDSLG---NLGKLKRLDLSFNSLFGT----IPESLANNAELLFLDVQNNTLS 125 (589)
Q Consensus 62 ~l~~L~~L~L~~N~l~g~~p~~~~---~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~l~l~~N~l~ 125 (589)
.+++|+.|+|++|++++..+..+. .+++|+.|+|+.|+|++. ++..+..+++|+.|+|++|.++
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 356666666666666543333332 356666666666666542 3333445566666666666655
No 412
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=5.1e-05 Score=78.42 Aligned_cols=76 Identities=9% Similarity=-0.049 Sum_probs=47.8
Q ss_pred ccccccCCCccEEEEEec-CCcEEEEEEeccCCC------chHHHHHHHHHHHHhccCC--CCc-cceeeeeecCCCCeE
Q 007788 314 VNLLGKGNFSSVYKGTLR-DGTLVAIRSINVTSC------KSEEAEFVKGLYLLTSLRH--ENI-IRLRGFCCSRGRGEC 383 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~l~~~~~------~~~~~~~~~e~~~l~~l~H--~ni-v~l~g~~~~~~~~~~ 383 (589)
.+.||.|.++.||++... +++.++||....... ......+..|.+++..+.. +.. .+++.+. . +..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~--~~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--T--EMA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--T--TTT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--C--Ccc
Confidence 457899999999999764 467899998653211 0112346678888877632 333 3555432 2 345
Q ss_pred EEEEEeCCCC
Q 007788 384 FLIYDFAPKG 393 (589)
Q Consensus 384 ~lv~Ey~~~g 393 (589)
++||||+++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 7999999864
No 413
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.80 E-value=0.00017 Score=72.60 Aligned_cols=144 Identities=13% Similarity=0.240 Sum_probs=77.2
Q ss_pred cccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhcc-----CCCCcccee-e-eeecCCCCeEEEEE
Q 007788 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSL-----RHENIIRLR-G-FCCSRGRGECFLIY 387 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g-~~~~~~~~~~~lv~ 387 (589)
+.|+.|..+.||+....+|. +++|+.... . .+...|..++..+ ..|.++... | ++. ...+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~--~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~-~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRP--E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYS-KHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSC--H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCE-EETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEE-EECCEEEEEE
Confidence 44666778999999876554 888988642 1 2223344444333 234444311 1 111 1235678999
Q ss_pred EeCCCCChH--------------HHhhhhcCC---C-------CCCCHHHHH----------------------------
Q 007788 388 DFAPKGKLS--------------KYLDQEEGS---S-------NVLDWSTRV---------------------------- 415 (589)
Q Consensus 388 Ey~~~gsL~--------------~~l~~~~~~---~-------~~l~~~~~~---------------------------- 415 (589)
||++|..+. ..+|..... . ..-.|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 112221110 0 112343211
Q ss_pred ---HHHHHHHHHhHHhcCC-------C-CCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 416 ---SIIIGIAKGIGYLHSS-------E-VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 416 ---~i~~~ia~~L~~LH~~-------~-~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
.+...+..++++|+.. . ...+.++|||+++.||+++.++.+.|.||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111233456666530 0 012449999999999999888889999999764
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.76 E-value=3.7e-06 Score=91.83 Aligned_cols=92 Identities=17% Similarity=0.170 Sum_probs=65.1
Q ss_pred hhcccceEEEcc--C----cccccC-----CCccccCCCCCCeEeccCCcCCccCCccccC-CCCCCeeeccCccccCCC
Q 007788 37 VILLCFVVLQLC--C----NQLTGN-----IPAQIGSLKSLSVLTLQHNRLNGGIPDSLGN-LGKLKRLDLSFNSLFGTI 104 (589)
Q Consensus 37 ~~l~~l~~L~L~--~----n~l~g~-----~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~-l~~L~~L~ls~N~l~g~~ 104 (589)
..+++|+.|+|+ + |+++.. ++..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..
T Consensus 394 ~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 394 RNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred hhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 347888888888 4 566632 122366778888888876 666666666665 788888888888887655
Q ss_pred hhhh-hcCCCCceeeccCCcCcccCc
Q 007788 105 PESL-ANNAELLFLDVQNNTLSGIVP 129 (589)
Q Consensus 105 p~~~-~~l~~L~~l~l~~N~l~g~~p 129 (589)
+..+ ..+++|+.|+|++|.+++..+
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~~~~~ 498 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFGDKAL 498 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCCHHHH
T ss_pred HHHHHhcCCCcCEEECcCCCCcHHHH
Confidence 5555 568888888888888854433
No 415
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=3e-05 Score=77.93 Aligned_cols=88 Identities=13% Similarity=0.005 Sum_probs=73.9
Q ss_pred cchhhhhhhhhHhhcccceEEEccCcccccCCCccccCCCCCC-eEeccCCcCCccCCccccCCCCCCeeeccCccccCC
Q 007788 25 KIFVIIFQIQLKVILLCFVVLQLCCNQLTGNIPAQIGSLKSLS-VLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGT 103 (589)
Q Consensus 25 ~~~~~~~~~~~~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~ 103 (589)
.||...|. .|.+|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|+|+.|+++..
T Consensus 240 ~I~~~aF~-----~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 240 TIPDFTFA-----QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp EECTTTTT-----TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred eecHhhhh-----CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 55555554 4999999999998 8755556999999999 999999 78755568999999999999999999965
Q ss_pred ChhhhhcCCCCceeec
Q 007788 104 IPESLANNAELLFLDV 119 (589)
Q Consensus 104 ~p~~~~~l~~L~~l~l 119 (589)
-+..|.++++|+.++.
T Consensus 313 ~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 313 GDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTTTTCTTCCCCEEEC
T ss_pred chhhhcCCcchhhhcc
Confidence 5668999999999874
No 416
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73 E-value=0.00018 Score=71.44 Aligned_cols=140 Identities=20% Similarity=0.205 Sum_probs=90.6
Q ss_pred ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccC---CCCccceeeeeecCCCCeEEEEEEeC
Q 007788 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR---HENIIRLRGFCCSRGRGECFLIYDFA 390 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~~~lv~Ey~ 390 (589)
.+.|+.|....+|+.... +..+++|+.... ....|..|.+.|+.+. ...+.++++++.. .+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~--~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNS--QGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC--SSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec--CCceEEEEEec
Confidence 456899999999999864 667888987532 3456888888888773 3667888887743 36789999999
Q ss_pred CCCChHH-----------HhhhhcC-C-----------------CCCCCHHHHH---HHH--HH--------------HH
Q 007788 391 PKGKLSK-----------YLDQEEG-S-----------------SNVLDWSTRV---SII--IG--------------IA 422 (589)
Q Consensus 391 ~~gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~--~~--------------ia 422 (589)
++..+.. .||.... . ...-+|.... ++. .+ +.
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9876521 2333221 0 0012565321 111 11 11
Q ss_pred -HHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccc
Q 007788 423 -KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCG 462 (589)
Q Consensus 423 -~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfG 462 (589)
.....|... ...|.++|+|+.+.||+++.++ +.|.||.
T Consensus 194 ~~l~~~L~~~-~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKH-NPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTC-CCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccC-CCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 112334322 1357799999999999999887 8899974
No 417
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=0.00018 Score=70.69 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=55.0
Q ss_pred CccccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCC---CCccceeeeeecCCCCeEEEEE
Q 007788 311 FSEVNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH---ENIIRLRGFCCSRGRGECFLIY 387 (589)
Q Consensus 311 f~~~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~~~~~~~lv~ 387 (589)
....+.+|.|..+.||+.++.||+.|+||+..... ......|..|.+.|+.+.- -.+.+++++. .-++||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------~~~lv~ 89 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------DRTLAM 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------TTEEEE
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc------CceEEE
Confidence 34456789999999999999999999999875443 2223457789888887742 2344555432 237899
Q ss_pred EeCCCCCh
Q 007788 388 DFAPKGKL 395 (589)
Q Consensus 388 Ey~~~gsL 395 (589)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987653
No 418
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.59 E-value=1.7e-05 Score=86.59 Aligned_cols=86 Identities=19% Similarity=0.164 Sum_probs=51.3
Q ss_pred hcccceEEEccCcccccCCCcccc-CCCCCCeEeccCC-cCCcc-CCccccCCCCCCeeeccCccccCCChhhhh----c
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIG-SLKSLSVLTLQHN-RLNGG-IPDSLGNLGKLKRLDLSFNSLFGTIPESLA----N 110 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~-~l~~L~~L~L~~N-~l~g~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~ 110 (589)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 466677777777766665555554 4667777777666 44422 333344566677777776666654444433 3
Q ss_pred CCCCceeeccCCc
Q 007788 111 NAELLFLDVQNNT 123 (589)
Q Consensus 111 l~~L~~l~l~~N~ 123 (589)
+++|+.|+|++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 4466666666665
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.48 E-value=0.00034 Score=72.79 Aligned_cols=78 Identities=13% Similarity=0.101 Sum_probs=46.3
Q ss_pred CCeEecCCCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCC---CCCCcchhhhHHHHHHHHH
Q 007788 436 PAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTG---RFTERSDIFAFGVIILQIL 512 (589)
Q Consensus 436 ~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~s~Gvvl~ell 512 (589)
+.++|||+++.|||++.++ ++|.||+.+..-.........-..-...|.+|+..... ......++......+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 3499999999999999876 99999998765432110000000001235666554311 1112345567888888877
Q ss_pred hC
Q 007788 513 TG 514 (589)
Q Consensus 513 tg 514 (589)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.15 E-value=0.00058 Score=58.28 Aligned_cols=36 Identities=22% Similarity=0.114 Sum_probs=17.8
Q ss_pred CCCeeeccCccccCCChhhhhcCCCCceeeccCCcC
Q 007788 89 KLKRLDLSFNSLFGTIPESLANNAELLFLDVQNNTL 124 (589)
Q Consensus 89 ~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~l~~N~l 124 (589)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 345555555555533333344455555555555555
No 421
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.14 E-value=0.00067 Score=67.01 Aligned_cols=71 Identities=4% Similarity=-0.070 Sum_probs=41.3
Q ss_pred ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCc-cceeeeeecCCCCeEEEEEEeC-C
Q 007788 314 VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI-IRLRGFCCSRGRGECFLIYDFA-P 391 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lv~Ey~-~ 391 (589)
.+.|+.|....+|+. ..+++|+....... ......|..++..+....+ .++++++ . +.-++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~~--~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHVD--P--ATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEEC--T--TTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEEE--C--CCCEEEEeecCC
Confidence 467888999999998 45788887643211 0112356666655532222 4555543 2 2236899999 5
Q ss_pred CCCh
Q 007788 392 KGKL 395 (589)
Q Consensus 392 ~gsL 395 (589)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 422
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.13 E-value=6.4e-05 Score=76.42 Aligned_cols=83 Identities=14% Similarity=0.227 Sum_probs=62.2
Q ss_pred cccceEEEccCcccccCCCccc---cCCCCCCeEeccCCcCCcc----CCccccCCCCCCeeeccCccccCCChhhhhc-
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQI---GSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFNSLFGTIPESLAN- 110 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~---~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~- 110 (589)
+++|++|+|++|.++...+..+ ..+++|+.|+|+.|+|++. ++..+.++++|+.|+|++|.++...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 6789999998888875444333 3588999999999999863 5556677899999999999988443333443
Q ss_pred CCCCceeeccCCc
Q 007788 111 NAELLFLDVQNNT 123 (589)
Q Consensus 111 l~~L~~l~l~~N~ 123 (589)
+ ...++++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 3568888877
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.13 E-value=0.00014 Score=65.20 Aligned_cols=84 Identities=10% Similarity=0.074 Sum_probs=63.0
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCc-CCccCCccccCC----CCCCeeeccCc-cccCCChhhhhcCCC
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNR-LNGGIPDSLGNL----GKLKRLDLSFN-SLFGTIPESLANNAE 113 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~l----~~L~~L~ls~N-~l~g~~p~~~~~l~~ 113 (589)
-.|+.|||+++.++..=-..+..+++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++ +++..=-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 469999999998875433567899999999999985 764222234543 47999999986 476432345778999
Q ss_pred CceeeccCCc
Q 007788 114 LLFLDVQNNT 123 (589)
Q Consensus 114 L~~l~l~~N~ 123 (589)
|+.|+|++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 424
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.11 E-value=0.0029 Score=62.96 Aligned_cols=163 Identities=13% Similarity=0.022 Sum_probs=84.9
Q ss_pred cCHHHHHHhhccCcc-----ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC--ccce
Q 007788 299 LNLEEVESATQCFSE-----VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN--IIRL 371 (589)
Q Consensus 299 ~~~~~l~~~~~~f~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l 371 (589)
++.+++......|.. .+.|+.|....+|+....+| .+++|........ ..+..|..++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~---~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEK---NDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---C---CHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCH---HHHHHHHHHHHHHHHCCCCCCcc
Confidence 455666655555654 23466788889999987766 5778887652111 23445666655553111 2333
Q ss_pred eeee----ecCCCCeEEEEEEeCCCCChHH--------------HhhhhcCC---C--CC---CCHHHHHHH--------
Q 007788 372 RGFC----CSRGRGECFLIYDFAPKGKLSK--------------YLDQEEGS---S--NV---LDWSTRVSI-------- 417 (589)
Q Consensus 372 ~g~~----~~~~~~~~~lv~Ey~~~gsL~~--------------~l~~~~~~---~--~~---l~~~~~~~i-------- 417 (589)
+... .....+..+++++|++|..+.. .+|..... . .. ..|.....-
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 3211 0001245689999999865321 12221100 0 00 124331110
Q ss_pred ----HHHHHHHhHHhcCCC--CCCCCeEecCCCCCCeeecCCCceEEccccccc
Q 007788 418 ----IIGIAKGIGYLHSSE--VNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHK 465 (589)
Q Consensus 418 ----~~~ia~~L~~LH~~~--~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~ 465 (589)
...+.+.+++++... .....++|+|+.+.|||++++..+.|.||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 111334445554210 123458999999999999987666899998764
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.09 E-value=0.0077 Score=59.94 Aligned_cols=162 Identities=9% Similarity=0.070 Sum_probs=86.8
Q ss_pred cCHHHHHHhhccCcc-----ccccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCC--CCccce
Q 007788 299 LNLEEVESATQCFSE-----VNLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRH--ENIIRL 371 (589)
Q Consensus 299 ~~~~~l~~~~~~f~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H--~niv~l 371 (589)
++.+++....+.|.. ...++ |....||+....+|+.+++|....... ....+..|..++..+.. -.+.++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecce
Confidence 444555544444432 23466 788899998877787899999864321 23345567777666632 123444
Q ss_pred eee---eecCCCCeEEEEEEeCCCCChH-----HH---------hhhhcC-----CCCCCCHHHH---------------
Q 007788 372 RGF---CCSRGRGECFLIYDFAPKGKLS-----KY---------LDQEEG-----SSNVLDWSTR--------------- 414 (589)
Q Consensus 372 ~g~---~~~~~~~~~~lv~Ey~~~gsL~-----~~---------l~~~~~-----~~~~l~~~~~--------------- 414 (589)
+.. ......+..++||||++|..+. .+ +|.... ....+++...
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 432 0001134568899999885432 11 121111 0112333211
Q ss_pred -------HHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 415 -------VSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 415 -------~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
...+..++..++-+-.. .....++|||+++.||+++ + .+.|.||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWRE-DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCS-CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 01111222222222111 1234589999999999999 4 889999987653
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.00089 Score=57.11 Aligned_cols=65 Identities=23% Similarity=0.343 Sum_probs=37.7
Q ss_pred eeeccCcccc-CCChhhhhcCCCCceeeccCCcCcccCchhHhhccC--CccccCCCCCCCCCCccCccc
Q 007788 92 RLDLSFNSLF-GTIPESLANNAELLFLDVQNNTLSGIVPSALKRLNG--GFQFQNNPGLCGDGIASLRAC 158 (589)
Q Consensus 92 ~L~ls~N~l~-g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~--~~~~~~n~~~c~~~~~~l~~~ 158 (589)
.++.+++.|+ ..+|..+ -++|+.|+|++|+|+...+..|..+.. .+.+.+|||.|+|.+..+..+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~w 79 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAW 79 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHH
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHH
Confidence 5566666665 2344332 135777777777777555555555432 355667777777766554443
No 427
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.95 E-value=0.0032 Score=57.92 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=67.3
Q ss_pred CChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecCCCCCCeeecCCCceEEccccccccccCCce
Q 007788 393 GKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQFNPLIADCGLHKLLADDIV 472 (589)
Q Consensus 393 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~~~~~~~ 472 (589)
-+|.+.|...+. ++++.++|.++.|.+++|.-+-... .+ ..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 33 vSL~eIL~~~~~---PlsEEqaWALc~Qc~~~L~~~~~~~--~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ---PINEEQAWAVCYQCCGSLRAAARRR--QP--RHRVRSAAQIRVWRDGAVTLAP-AADD------- 97 (229)
T ss_dssp EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CC--CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcCC---CcCHHHHHHHHHHHHHHHHhhhhcc--cC--CceecCCcceEEecCCceeccc-cccc-------
Confidence 489999987764 5999999999999999988762111 00 1222346889999999998874 2111
Q ss_pred eeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCC
Q 007788 473 FSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLV 517 (589)
Q Consensus 473 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p 517 (589)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0111267888764 3457888999999999988765443
No 428
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.95 E-value=0.00094 Score=68.89 Aligned_cols=90 Identities=21% Similarity=0.135 Sum_probs=54.5
Q ss_pred ccceEEEccCcccccCCCccccCCCCCCeEeccCCcCC-----ccCCccccCCCCCCeeeccCccccCCChhhhhcCCCC
Q 007788 40 LCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLN-----GGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAEL 114 (589)
Q Consensus 40 ~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~-----g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L 114 (589)
.+|+.+.|. |+++..-+..|.+|++|+.++|.+|.+. -.-+.+|.+|++|+.++|. |+++-.-...|.++.+|
T Consensus 248 ~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSC
T ss_pred CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCc
Confidence 567777773 4455333457777777777777777664 2334567777777777777 34553333456667777
Q ss_pred ceeeccCCcCcccCchhH
Q 007788 115 LFLDVQNNTLSGIVPSAL 132 (589)
Q Consensus 115 ~~l~l~~N~l~g~~p~~~ 132 (589)
+.++|.+| ++..-+.+|
T Consensus 326 ~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp CEEEECTT-CCEECTTSS
T ss_pred cEEEECcc-ccEEcHHhC
Confidence 77777544 443333333
No 429
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.89 E-value=0.0073 Score=60.35 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=26.7
Q ss_pred CCeEecCCCCCCeeecCC----CceEEcccccccc
Q 007788 436 PAIVHRNLSVEKVLIDQQ----FNPLIADCGLHKL 466 (589)
Q Consensus 436 ~~ivH~dlk~~Nill~~~----~~~kl~DfGla~~ 466 (589)
+.++|||+.+.|||++.+ ..+.|.||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 459999999999999875 6789999998764
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.86 E-value=0.0027 Score=66.01 Aligned_cols=73 Identities=18% Similarity=0.264 Sum_probs=48.6
Q ss_pred ccccccCCCccEEEEEecC--------CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCc-cceeeeeecCCCCeEE
Q 007788 314 VNLLGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI-IRLRGFCCSRGRGECF 384 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~~~ 384 (589)
.+.|+.|....+|+....+ +..+++|+..... ....+..|..++..+...++ .++++.+ . + .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~--~--~--g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIF--S--G--G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEE--T--T--E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEe--C--C--C
Confidence 3567888889999998753 5789999884321 11345678888887743333 5666655 2 1 3
Q ss_pred EEEEeCCCCCh
Q 007788 385 LIYDFAPKGKL 395 (589)
Q Consensus 385 lv~Ey~~~gsL 395 (589)
+|+||+++.+|
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986443
No 431
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79 E-value=0.0033 Score=64.02 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=80.4
Q ss_pred cccccCCCccEEEEEec--------CCcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEEE
Q 007788 315 NLLGKGNFSSVYKGTLR--------DGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECFL 385 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~l 385 (589)
+.|..|-...+|+.... +++.+++|+..... .....+.+|.++++.+. +.-..++++++ .+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--~~~~~~~rE~~vl~~L~~~gv~P~ll~~~--~~----g~ 127 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--QGVDSLVLESVMFAILAERSLGPQLYGVF--PE----GR 127 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE--TT----EE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--chHHHHHHHHHHHHHHHhcCCCCeEEEEc--CC----cc
Confidence 45777888899999875 24789999864321 22345668888887774 32235666655 32 28
Q ss_pred EEEeCCCCChHHH-----------------hhhhcC-CCCCCC--HHHHHHHHHHHHH-------------------HhH
Q 007788 386 IYDFAPKGKLSKY-----------------LDQEEG-SSNVLD--WSTRVSIIIGIAK-------------------GIG 426 (589)
Q Consensus 386 v~Ey~~~gsL~~~-----------------l~~~~~-~~~~l~--~~~~~~i~~~ia~-------------------~L~ 426 (589)
||||++|.+|..- ||.... ...... |.+..++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 9999998655311 111111 011222 3333334433211 122
Q ss_pred ----HhcCCCCCCCCeEecCCCCCCeeecCC----CceEEccccccc
Q 007788 427 ----YLHSSEVNKPAIVHRNLSVEKVLIDQQ----FNPLIADCGLHK 465 (589)
Q Consensus 427 ----~LH~~~~~~~~ivH~dlk~~Nill~~~----~~~kl~DfGla~ 465 (589)
+|.... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~-~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTP-SPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSC-CCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcC-CCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 232222 23468999999999999876 789999998765
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.73 E-value=0.00059 Score=62.38 Aligned_cols=87 Identities=9% Similarity=0.078 Sum_probs=63.3
Q ss_pred hcccceEEEccCc-cccc----CCCccccCCCCCCeEeccCCcCCcc----CCccccCCCCCCeeeccCccccCC----C
Q 007788 38 ILLCFVVLQLCCN-QLTG----NIPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFNSLFGT----I 104 (589)
Q Consensus 38 ~l~~l~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N~l~g~----~ 104 (589)
.-+.|+.|+|++| ++.. .+-..+..-+.|+.|+|++|+|... |-..+..-+.|+.|+|++|+|+.. +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3567999999986 7652 1345567778999999999999842 333344457899999999999843 2
Q ss_pred hhhhhcCCCCceeeccCCcC
Q 007788 105 PESLANNAELLFLDVQNNTL 124 (589)
Q Consensus 105 p~~~~~l~~L~~l~l~~N~l 124 (589)
-..+...+.|+.|+|++|..
T Consensus 119 a~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSS
T ss_pred HHHHhhCCceeEEECCCCcC
Confidence 33466677899999987643
No 433
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.36 E-value=0.018 Score=57.71 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=27.7
Q ss_pred CCCeEecCCCCCCeeecCCCceEEcccccccc
Q 007788 435 KPAIVHRNLSVEKVLIDQQFNPLIADCGLHKL 466 (589)
Q Consensus 435 ~~~ivH~dlk~~Nill~~~~~~kl~DfGla~~ 466 (589)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45699999999999999888899999987653
No 434
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.26 E-value=0.0059 Score=62.04 Aligned_cols=73 Identities=14% Similarity=0.086 Sum_probs=42.1
Q ss_pred cccccCCCccEEEEEecC---------CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCC-ccceeeeeecCCCCeEE
Q 007788 315 NLLGKGNFSSVYKGTLRD---------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHEN-IIRLRGFCCSRGRGECF 384 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~n-iv~l~g~~~~~~~~~~~ 384 (589)
..|+.|....+|+....+ +..+++|+...... ...+...|.+++..+...+ ..++++.. . + +
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~--~ 110 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD--ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--G--G 110 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG--GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T--E
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc--ceecHHHHHHHHHHHHhcCCCCceEEec--C--C--c
Confidence 457788888999998754 26788888754321 1112346677776664323 34565543 2 2 6
Q ss_pred EEEEeCCCCCh
Q 007788 385 LIYDFAPKGKL 395 (589)
Q Consensus 385 lv~Ey~~~gsL 395 (589)
+||||+++..+
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.17 E-value=0.0046 Score=63.64 Aligned_cols=95 Identities=11% Similarity=0.029 Sum_probs=75.2
Q ss_pred hhcccceEEEccCcccc-----cCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcC
Q 007788 37 VILLCFVVLQLCCNQLT-----GNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANN 111 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~-----g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l 111 (589)
..|++|+.|+|.+|.+. ..-+..|.+|++|+.++|. |.++-.-..+|.+|++|+.++|.+| ++..-+.+|.++
T Consensus 268 ~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 268 YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 34999999999998775 2345689999999999999 4587455668999999999999765 664445678889
Q ss_pred CCCceeeccCCcCcccCchhHhh
Q 007788 112 AELLFLDVQNNTLSGIVPSALKR 134 (589)
Q Consensus 112 ~~L~~l~l~~N~l~g~~p~~~~~ 134 (589)
+|+.|++++|.+....+..+..
T Consensus 346 -~L~~l~l~~n~~~~l~~~~F~~ 367 (401)
T 4fdw_A 346 -GIKEVKVEGTTPPQVFEKVWYG 367 (401)
T ss_dssp -CCCEEEECCSSCCBCCCSSCCC
T ss_pred -CCCEEEEcCCCCcccccccccC
Confidence 9999999999887555444443
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.13 E-value=0.025 Score=59.11 Aligned_cols=73 Identities=15% Similarity=0.038 Sum_probs=46.0
Q ss_pred cccccCCCccEEEEEecC-CcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCc-cceeeeeecCCCCeEEEEEEeCCC
Q 007788 315 NLLGKGNFSSVYKGTLRD-GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENI-IRLRGFCCSRGRGECFLIYDFAPK 392 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~~-~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~~~lv~Ey~~~ 392 (589)
+.|+.|-...+|+....+ +..+++|+....... . .+-..|..++..+...++ .++++++ . + ..||||+++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~-idR~~E~~vl~~L~~~gl~P~ll~~~--~--~--G~v~e~I~G 185 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-I-INREREKKISCILYNKNIAKKIYVFF--T--N--GRIEEFMDG 185 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-C-SCHHHHHHHHHHHTTSSSBCCEEEEE--T--T--EEEEECCCS
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-h-cCHHHHHHHHHHHHhcCCCCCEEEEe--C--C--eEEEEeeCC
Confidence 567888889999999875 578889987543211 1 112467778887764444 4666665 2 2 259999987
Q ss_pred CCh
Q 007788 393 GKL 395 (589)
Q Consensus 393 gsL 395 (589)
.+|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.07 E-value=0.0016 Score=59.46 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=64.6
Q ss_pred cccceEEEccCcccccC----CCccccCCCCCCeEeccCCcCCcc----CCccccCCCCCCeeeccCc---cccC----C
Q 007788 39 LLCFVVLQLCCNQLTGN----IPAQIGSLKSLSVLTLQHNRLNGG----IPDSLGNLGKLKRLDLSFN---SLFG----T 103 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~ls~N---~l~g----~ 103 (589)
-+.|+.|+|++|+|... +-+.+..-+.|+.|+|++|+|+.. |-.++..-+.|+.|+|++| .+.. .
T Consensus 69 N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ 148 (197)
T 1pgv_A 69 SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMD 148 (197)
T ss_dssp CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHH
T ss_pred CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHH
Confidence 46799999999999832 333455668999999999999842 3334555577999999875 3332 2
Q ss_pred ChhhhhcCCCCceeeccCCcCc
Q 007788 104 IPESLANNAELLFLDVQNNTLS 125 (589)
Q Consensus 104 ~p~~~~~l~~L~~l~l~~N~l~ 125 (589)
+...+...+.|+.|+++.|...
T Consensus 149 ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 149 MMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhCCCcCeEeccCCCcc
Confidence 4566778899999999988764
No 438
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.17 E-value=0.07 Score=54.51 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=81.2
Q ss_pred cccccCCCccEEEEEecC--------CcEEEEEEeccCCCc----------hHH-------HHHHHHHHHHhccC-CCCc
Q 007788 315 NLLGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCK----------SEE-------AEFVKGLYLLTSLR-HENI 368 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~----------~~~-------~~~~~e~~~l~~l~-H~ni 368 (589)
+.|..|-...+|+...++ ...|.+++.-..... ..+ .....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999998764 367888887543210 001 12235777777774 3335
Q ss_pred cceeeeeecCCCCeEEEEEEeCCCCChHH--H---------------hhhhcC-CCCCCC--HHHHHHHHHHHH------
Q 007788 369 IRLRGFCCSRGRGECFLIYDFAPKGKLSK--Y---------------LDQEEG-SSNVLD--WSTRVSIIIGIA------ 422 (589)
Q Consensus 369 v~l~g~~~~~~~~~~~lv~Ey~~~gsL~~--~---------------l~~~~~-~~~~l~--~~~~~~i~~~ia------ 422 (589)
.++++++ . + .+|+||+++-+|.. + +|.... ...... |....++..++.
T Consensus 138 Pkl~~~~--~--~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 211 (401)
T 3f2s_A 138 PKLYGIF--P--Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTE 211 (401)
T ss_dssp CCEEEEE--T--T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCS
T ss_pred CeEEEEe--C--C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcc
Confidence 5676665 2 1 28999999754421 1 111110 111223 223333332221
Q ss_pred --------------------HHhHHhcCCCCCCCCeEecCCCCCCeeecCC------CceEEccccccc
Q 007788 423 --------------------KGIGYLHSSEVNKPAIVHRNLSVEKVLIDQQ------FNPLIADCGLHK 465 (589)
Q Consensus 423 --------------------~~L~~LH~~~~~~~~ivH~dlk~~Nill~~~------~~~kl~DfGla~ 465 (589)
.--++|...+ ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 212 ~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~-~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 212 ESRIKKLHKLLSYNLPLELENLRSLLESTP-SPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSC-CCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHhhcC-CCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1112333322 34468999999999999887 789999998764
No 439
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.61 E-value=0.039 Score=56.43 Aligned_cols=79 Identities=11% Similarity=0.025 Sum_probs=42.9
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++-.=..+|.+|++|+.+.+..| ++-.-..+|.++.+|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 556666666544 44222345666666666666533 44222345666666666666555 4422234566666666666
Q ss_pred cc
Q 007788 119 VQ 120 (589)
Q Consensus 119 l~ 120 (589)
+.
T Consensus 373 lp 374 (394)
T 4fs7_A 373 LP 374 (394)
T ss_dssp EE
T ss_pred EC
Confidence 54
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.90 E-value=0.027 Score=50.33 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=46.5
Q ss_pred CCCCeEeccCCcCCccCCccccCCCCCCeeeccCcc-ccCCChhhhhcC----CCCceeeccCCc-Cc
Q 007788 64 KSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNS-LFGTIPESLANN----AELLFLDVQNNT-LS 125 (589)
Q Consensus 64 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~l~l~~N~-l~ 125 (589)
.+|+.|||+++.++..==..+.+|++|+.|+|+++. ++..==..+..+ ++|+.|+|+++. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 579999999999875433457889999999999985 664322345554 379999999974 65
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.83 E-value=0.15 Score=52.04 Aligned_cols=79 Identities=9% Similarity=0.092 Sum_probs=36.1
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+..|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-..+|.+|.+|+.++|..| ++-.-..+|.++.+|+.+.
T Consensus 264 c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 264 CAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp CSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 555555555544322 223345555555555553 3333222234555555555555433 3311123455555555555
Q ss_pred cc
Q 007788 119 VQ 120 (589)
Q Consensus 119 l~ 120 (589)
+.
T Consensus 341 ip 342 (394)
T 4gt6_A 341 IP 342 (394)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 442
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.40 E-value=0.18 Score=51.89 Aligned_cols=74 Identities=12% Similarity=-0.015 Sum_probs=46.1
Q ss_pred ccccccCCCccEEEEEecC--------CcEEEEEEeccCCCchHHHHHHHHHHHHhccC-CCCccceeeeeecCCCCeEE
Q 007788 314 VNLLGKGNFSSVYKGTLRD--------GTLVAIRSINVTSCKSEEAEFVKGLYLLTSLR-HENIIRLRGFCCSRGRGECF 384 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~~~ 384 (589)
.+.+..|-...+|+....+ +..+++|+....... ..+-.+|.++++.+. +.-..++++.+ . + +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~--~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK--FYDSKVELDVFRYLSNINIAPNIIADF--P--E--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C--CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--T--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch--hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--C--C
Confidence 3457778888999998763 578999987543211 112245666666663 22244555543 2 2 6
Q ss_pred EEEEeCCCCCh
Q 007788 385 LIYDFAPKGKL 395 (589)
Q Consensus 385 lv~Ey~~~gsL 395 (589)
.||||++|..|
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998654
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.09 E-value=0.14 Score=51.82 Aligned_cols=83 Identities=8% Similarity=0.011 Sum_probs=51.0
Q ss_pred hcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCcee
Q 007788 38 ILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFL 117 (589)
Q Consensus 38 ~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l 117 (589)
.+..|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++-.-..+|.+|++|+.+.+.+|.++-.-...|.++.+|+.+
T Consensus 238 ~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i 315 (379)
T 4h09_A 238 GMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSV 315 (379)
T ss_dssp TCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEE
T ss_pred CCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEE
Confidence 3667777777655 54233446677777777777543 442333456777777777777776663333466677777777
Q ss_pred eccCC
Q 007788 118 DVQNN 122 (589)
Q Consensus 118 ~l~~N 122 (589)
+|.+|
T Consensus 316 ~lp~~ 320 (379)
T 4h09_A 316 TLPTA 320 (379)
T ss_dssp ECCTT
T ss_pred EcCcc
Confidence 77543
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.98 E-value=0.099 Score=53.37 Aligned_cols=86 Identities=9% Similarity=0.137 Sum_probs=66.5
Q ss_pred hhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCce
Q 007788 37 VILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLF 116 (589)
Q Consensus 37 ~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~ 116 (589)
..+.+|+.+.+. +.++..-...|.++++|+.++|..| ++-.-..+|.+|.+|+.+.|..+ ++-.-..+|.++.+|+.
T Consensus 285 ~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~ 361 (394)
T 4gt6_A 285 MNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNN 361 (394)
T ss_dssp TTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCE
T ss_pred ccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCE
Confidence 348899999996 4566343458999999999999865 66344568999999999999765 66233467999999999
Q ss_pred eeccCCcCc
Q 007788 117 LDVQNNTLS 125 (589)
Q Consensus 117 l~l~~N~l~ 125 (589)
+++.+|...
T Consensus 362 i~~~~~~~~ 370 (394)
T 4gt6_A 362 IEYSGSRSQ 370 (394)
T ss_dssp EEESSCHHH
T ss_pred EEECCceee
Confidence 999887643
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.31 E-value=0.35 Score=31.85 Aligned_cols=12 Identities=8% Similarity=0.346 Sum_probs=4.9
Q ss_pred chhhHHHHHHHH
Q 007788 210 VLAAVTSVTVIL 221 (589)
Q Consensus 210 iia~v~~~~v~l 221 (589)
+.+++++.++++
T Consensus 13 IA~gVVgGv~~~ 24 (44)
T 2ks1_B 13 IATGMVGALLLL 24 (44)
T ss_dssp STHHHHHHHHHH
T ss_pred EEeehhHHHHHH
Confidence 344444433333
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=90.93 E-value=0.2 Score=51.06 Aligned_cols=78 Identities=13% Similarity=0.073 Sum_probs=60.1
Q ss_pred HhhcccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCc
Q 007788 36 KVILLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELL 115 (589)
Q Consensus 36 ~~~l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~ 115 (589)
+..+.+|+.++|.++ ++-.-...|.++++|+.++|..| ++-.-..+|.+|++|+.+++..| ++ .+...|.++++|+
T Consensus 316 F~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~ 391 (394)
T 4fs7_A 316 FESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFK 391 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEE
T ss_pred hcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCc
Confidence 345899999999755 77333568999999999999877 77444568999999999999865 44 4556788887776
Q ss_pred ee
Q 007788 116 FL 117 (589)
Q Consensus 116 ~l 117 (589)
.+
T Consensus 392 ~I 393 (394)
T 4fs7_A 392 WI 393 (394)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 447
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=90.83 E-value=0.34 Score=48.89 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=62.3
Q ss_pred cccceEEEccCcccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCccccCCChhhhhcCCCCceee
Q 007788 39 LLCFVVLQLCCNQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFNSLFGTIPESLANNAELLFLD 118 (589)
Q Consensus 39 l~~l~~L~L~~n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~l~ 118 (589)
+.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.++
T Consensus 216 ~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~ 292 (379)
T 4h09_A 216 GKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVV 292 (379)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEE
T ss_pred ccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccc
Confidence 667777777655 44244457788888888888765 55334556778888888888654 4423334677788888888
Q ss_pred ccCCcCcccCchhHhh
Q 007788 119 VQNNTLSGIVPSALKR 134 (589)
Q Consensus 119 l~~N~l~g~~p~~~~~ 134 (589)
+.+|.++..-..+|..
T Consensus 293 l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 293 MDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECCTTCCEECTTTTTT
T ss_pred ccccccceehhhhhcC
Confidence 8888777444444443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=90.17 E-value=0.34 Score=31.85 Aligned_cols=12 Identities=33% Similarity=0.321 Sum_probs=4.8
Q ss_pred chhhHHHHHHHH
Q 007788 210 VLAAVTSVTVIL 221 (589)
Q Consensus 210 iia~v~~~~v~l 221 (589)
+.+++++.++++
T Consensus 12 IA~gVVgGv~~v 23 (44)
T 2l2t_A 12 IAAGVIGGLFIL 23 (44)
T ss_dssp HHHHHHHHHHHH
T ss_pred EEEeehHHHHHH
Confidence 334444433333
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.67 E-value=0.5 Score=30.96 Aligned_cols=7 Identities=29% Similarity=0.434 Sum_probs=2.6
Q ss_pred hhhhhhh
Q 007788 229 FFRYRRH 235 (589)
Q Consensus 229 ~~~~rr~ 235 (589)
++.+||+
T Consensus 33 ~~~RRR~ 39 (44)
T 2jwa_A 33 ILIKRRQ 39 (44)
T ss_dssp HHHHHHC
T ss_pred hheehhh
Confidence 3333333
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.51 E-value=0.089 Score=53.95 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=24.4
Q ss_pred eEecCCCCCCeee------cCCCceEEcccccccc
Q 007788 438 IVHRNLSVEKVLI------DQQFNPLIADCGLHKL 466 (589)
Q Consensus 438 ivH~dlk~~Nill------~~~~~~kl~DfGla~~ 466 (589)
++|+|+.+.|||+ +++..+.++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999987754
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.85 E-value=4.1 Score=37.22 Aligned_cols=119 Identities=9% Similarity=0.152 Sum_probs=78.8
Q ss_pred cCCCCccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCCCCCeEecC
Q 007788 363 LRHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIGYLHSSEVNKPAIVHRN 442 (589)
Q Consensus 363 l~H~niv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~~ivH~d 442 (589)
..||+.+.. .+- .+.+.+.+.|+.- .+...|-.-. .++...+++++..|+..-+++++. +|--
T Consensus 42 ~~~~~Fl~~-~I~--e~eD~v~~~y~~~--~~~~~f~~ik-----~~~~~eKlr~l~ni~~l~~~~~~r-------~tf~ 104 (215)
T 4ann_A 42 QHSPYFIDA-ELT--ELRDSFQIHYDIN--DNHTPFDNIK-----SFTKNEKLRYLLNIKNLEEVNRTR-------YTFV 104 (215)
T ss_dssp SCCTTBCCE-EEE--ECSSEEEEEECCC--TTSEEGGGGG-----GSCHHHHHHHHHHGGGGGGGGGSS-------EECC
T ss_pred ccCCcccce-EEE--EcccEEEEEEEcC--cccCCHHHHH-----hcCHHHHHHHHHHHHHHHHHhcCc-------eEEE
Confidence 368888865 233 2334555545443 3333332211 277889999999999988777653 7888
Q ss_pred CCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchh
Q 007788 443 LSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521 (589)
Q Consensus 443 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~ 521 (589)
|.|+|++++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|...
T Consensus 105 L~P~NL~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 105 LAPDELFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp CSGGGEEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EecceEEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999887764322 222 1222333445788899999998888543
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.26 E-value=0.14 Score=53.46 Aligned_cols=60 Identities=10% Similarity=0.120 Sum_probs=16.9
Q ss_pred ccccccCCCccEEEEEecC-CcEEEE------EEeccCCC-chHHHHHHHHHHHHhccCCCCccceeeeee
Q 007788 314 VNLLGKGNFSSVYKGTLRD-GTLVAI------RSINVTSC-KSEEAEFVKGLYLLTSLRHENIIRLRGFCC 376 (589)
Q Consensus 314 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~l~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 376 (589)
.+.|| ||.||+|.+.. ...||| |..+.... ......|.+|..++.+.+|||+++.++|..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34565 99999999864 467888 76654322 233356888999999999999999988764
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=80.11 E-value=4.9 Score=36.85 Aligned_cols=117 Identities=9% Similarity=0.109 Sum_probs=77.4
Q ss_pred CCCCccceeeeeecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHHHHHHHHHHHHhH-HhcCCCCCCCCeEecC
Q 007788 364 RHENIIRLRGFCCSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTRVSIIIGIAKGIG-YLHSSEVNKPAIVHRN 442 (589)
Q Consensus 364 ~H~niv~l~g~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~~~ivH~d 442 (589)
.||+. .. .+- .+.+.+.+.|+.-+++.=...+. .++...|++++..|+.... +++. -+|--
T Consensus 48 ~~~~f-~~-~I~--~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~-------r~tf~ 109 (219)
T 4ano_A 48 VDPCI-VR-DID--VSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSAR-------RLIFI 109 (219)
T ss_dssp SCSSS-EE-EEE--ECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSS-------SEECC
T ss_pred cCCCC-Ce-EEE--EeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhC-------ceeEE
Confidence 67777 22 222 33466666666554432233332 2778899999999998877 6665 37888
Q ss_pred CCCCCeeecCCCceEEccccccccccCCceeeeecCCccccccCcccccCCCCCCcchhhhHHHHHHHHHhCCCCcchh
Q 007788 443 LSVEKVLIDQQFNPLIADCGLHKLLADDIVFSVLKTSAAMGYLAPEYVTTGRFTERSDIFAFGVIILQILTGSLVLTSS 521 (589)
Q Consensus 443 lk~~Nill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvvl~elltg~~p~~~~ 521 (589)
|.|+|+++|.++.+++.-.|+-.. ++|.- .++.-=.-.+=+++..++.++..|...
T Consensus 110 l~P~NL~f~~~~~p~i~hRGi~~~------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 110 VCPENLMFNRALEPFFLHVGVKES------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp CCGGGEEECTTCCEEESCCEETTT------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EeCceEEEeCCCcEEEEEcCCccc------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999999998876432 23321 122222445778888889888877544
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=76.11 E-value=2.6 Score=26.73 Aligned_cols=6 Identities=33% Similarity=0.346 Sum_probs=2.3
Q ss_pred chhhHH
Q 007788 210 VLAAVT 215 (589)
Q Consensus 210 iia~v~ 215 (589)
.+++++
T Consensus 12 aIAGiV 17 (38)
T 2k1k_A 12 EIVAVI 17 (38)
T ss_dssp HHHHHH
T ss_pred ceeeee
Confidence 344433
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=61.45 E-value=3.6 Score=25.43 Aligned_cols=7 Identities=29% Similarity=0.605 Sum_probs=2.8
Q ss_pred chhhHHH
Q 007788 210 VLAAVTS 216 (589)
Q Consensus 210 iia~v~~ 216 (589)
+++++++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3344444
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=50.43 E-value=1.4e+02 Score=29.05 Aligned_cols=138 Identities=9% Similarity=0.098 Sum_probs=71.1
Q ss_pred cccccCCCccEEEEEecCCcEEEEEEeccCCCchHHHHHHHHHHHHhccCCCCccceeee-------------e------
Q 007788 315 NLLGKGNFSSVYKGTLRDGTLVAIRSINVTSCKSEEAEFVKGLYLLTSLRHENIIRLRGF-------------C------ 375 (589)
Q Consensus 315 ~~lg~G~~g~Vy~~~~~~~~~vavK~l~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~-------------~------ 375 (589)
+..-.|. +.||.+.. ++..|+||... ....+-|..++...-.+.-|+.--+.-. +
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 4444454 56666666 57788999542 2222334444444444555542211100 0
Q ss_pred -ecCCCCeEEEEEEeCCCCChHHHhhhhcCCCCCCCHHHH--HHHHHH--HHHHhHHhcCCCCCCCCeEecCCCCCCeee
Q 007788 376 -CSRGRGECFLIYDFAPKGKLSKYLDQEEGSSNVLDWSTR--VSIIIG--IAKGIGYLHSSEVNKPAIVHRNLSVEKVLI 450 (589)
Q Consensus 376 -~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~~l~~~~~--~~i~~~--ia~~L~~LH~~~~~~~~ivH~dlk~~Nill 450 (589)
.....+..+++|||.+|..|.+.-+. .|... .+.+.+ -.-+++.+..+....|-+.+.-=.+.|||+
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~--------~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTT--------SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSS--------SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred HHHhhcccceehhhhcCCCccccchhh--------hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 00012356799999997665543221 11111 122232 234566666654322322323357899999
Q ss_pred cCCCc-eEEcccccccc
Q 007788 451 DQQFN-PLIADCGLHKL 466 (589)
Q Consensus 451 ~~~~~-~kl~DfGla~~ 466 (589)
+++.. +.++|-+.+..
T Consensus 221 ~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 221 SERGATVVPIDSKIIPL 237 (342)
T ss_dssp ESBTTCEEECSCCCCCC
T ss_pred eCCCCeEEEEcCCcccc
Confidence 87655 88999988754
No 457
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=35.71 E-value=21 Score=23.34 Aligned_cols=12 Identities=8% Similarity=0.232 Sum_probs=6.2
Q ss_pred hhhhhhhhhhcc
Q 007788 228 IFFRYRRHKQKI 239 (589)
Q Consensus 228 ~~~~~rr~k~~~ 239 (589)
..+....++++.
T Consensus 29 l~~~~~~RRR~~ 40 (44)
T 2jwa_A 29 VVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHCS
T ss_pred HHHHhheehhhh
Confidence 345555555554
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.56 E-value=3.6e+02 Score=28.63 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=45.8
Q ss_pred EEEeCCCCChHHHhh----------hhcCCCC---CCCHHHHHHHHHHHHH--HhHHhcCCCCCCCCeEecCCCCCCeee
Q 007788 386 IYDFAPKGKLSKYLD----------QEEGSSN---VLDWSTRVSIIIGIAK--GIGYLHSSEVNKPAIVHRNLSVEKVLI 450 (589)
Q Consensus 386 v~Ey~~~gsL~~~l~----------~~~~~~~---~l~~~~~~~i~~~ia~--~L~~LH~~~~~~~~ivH~dlk~~Nill 450 (589)
+.|++++.++.+.+. ....... ...|..+..++..+|- -+.|+=.- +|=.++|||+
T Consensus 416 lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---------gDRH~~NILl 486 (614)
T 3ls8_A 416 FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---------GDRHLDNLLL 486 (614)
T ss_dssp EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC---------CCCCTTSEEE
T ss_pred eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec---------cCCCCcceeE
Confidence 358888766655543 2221111 1235566666666553 46666432 5788999999
Q ss_pred cCCCceEEccccccc
Q 007788 451 DQQFNPLIADCGLHK 465 (589)
Q Consensus 451 ~~~~~~kl~DfGla~ 465 (589)
+.+|++.=+|||..-
T Consensus 487 d~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 487 TKTGKLFHIDFGYIL 501 (614)
T ss_dssp CTTSCEEECCCSSCT
T ss_pred cCCCCEeeeehHHhh
Confidence 999999999999864
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.53 E-value=1.2e+02 Score=23.50 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=31.1
Q ss_pred cccccCCCccccCCCCCCeEeccCCcCCccCCccccCCCCCCeeeccCc
Q 007788 50 NQLTGNIPAQIGSLKSLSVLTLQHNRLNGGIPDSLGNLGKLKRLDLSFN 98 (589)
Q Consensus 50 n~l~g~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~ls~N 98 (589)
..++..-...|.++++|+.+.|-.+ ++-.=..+|.+|.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455333457888888888877654 33233456778888888887654
No 460
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.80 E-value=1.3e+02 Score=20.61 Aligned_cols=16 Identities=31% Similarity=0.310 Sum_probs=7.0
Q ss_pred CcccchhhHHHHHHHH
Q 007788 206 PQIAVLAAVTSVTVIL 221 (589)
Q Consensus 206 ~~~~iia~v~~~~v~l 221 (589)
+...++.++.++++++
T Consensus 11 p~wiIi~svl~GLllL 26 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLL 26 (54)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 4444444444444333
No 461
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=23.60 E-value=1.2e+02 Score=20.73 Aligned_cols=15 Identities=13% Similarity=0.231 Sum_probs=6.2
Q ss_pred CcccchhhHHHHHHH
Q 007788 206 PQIAVLAAVTSVTVI 220 (589)
Q Consensus 206 ~~~~iia~v~~~~v~ 220 (589)
+...++.++.+++++
T Consensus 8 p~WiIi~svl~GLLL 22 (54)
T 2l8s_A 8 PLWVILLSAFAGLLL 22 (54)
T ss_dssp CTHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHH
Confidence 334444444444333
No 462
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=22.72 E-value=88 Score=18.94 Aligned_cols=8 Identities=38% Similarity=0.982 Sum_probs=3.0
Q ss_pred Hhhhhhhh
Q 007788 227 LIFFRYRR 234 (589)
Q Consensus 227 ~~~~~~rr 234 (589)
+.+|+-||
T Consensus 27 flywrgrr 34 (40)
T 2l9u_A 27 FLYWRGRR 34 (40)
T ss_dssp HHHHHHHH
T ss_pred eEEEcccc
Confidence 33333333
Done!