Your job contains 1 sequence.
>007789
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK
WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQLRKEA
EARAEELKKSKQVTKPMNNLKKQGGQLQKGGFERGSNRSGGGSANDDGDSDNMRGRKLEN
GHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDP
KKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKEEVFSSDSESEED
EEVGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEALVR
ILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACD
TFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDN
EPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLT
KFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007789
(589 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2118701 - symbol:AT4G30600 species:3702 "Arabi... 1073 1.2e-210 2
DICTYBASE|DDB_G0277377 - symbol:srpR "signal recognition ... 739 3.1e-106 3
FB|FBgn0010391 - symbol:Gtp-bp "GTP-binding protein" spec... 748 2.4e-104 3
UNIPROTKB|F1NXV4 - symbol:SRPR "Uncharacterized protein" ... 731 2.7e-101 3
MGI|MGI:1914648 - symbol:Srpr "signal recognition particl... 727 2.4e-100 3
RGD|1311504 - symbol:Srpr "signal recognition particle re... 727 1.7e-99 3
UNIPROTKB|Q3MHE8 - symbol:SRPR "Signal recognition partic... 726 3.0e-98 3
UNIPROTKB|P08240 - symbol:SRPR "Signal recognition partic... 727 2.7e-97 3
UNIPROTKB|F1S754 - symbol:SRPR "Uncharacterized protein" ... 726 2.7e-97 3
ZFIN|ZDB-GENE-030219-11 - symbol:srpr "signal recognition... 744 7.0e-97 3
UNIPROTKB|P06625 - symbol:SRPR "Signal recognition partic... 718 2.4e-96 3
WB|WBGene00009521 - symbol:F38A1.8 species:6239 "Caenorha... 714 1.3e-93 3
UNIPROTKB|F1PLH3 - symbol:SRPR "Signal recognition partic... 726 2.1e-93 3
UNIPROTKB|J9NTJ9 - symbol:SRPR "Signal recognition partic... 726 2.3e-92 3
UNIPROTKB|J9P788 - symbol:SRPR "Signal recognition partic... 726 5.3e-89 3
UNIPROTKB|F1MNJ2 - symbol:SRPR "Signal recognition partic... 602 3.2e-85 3
ASPGD|ASPL0000006202 - symbol:AN6627 species:162425 "Emer... 490 2.3e-70 4
POMBASE|SPBC3B9.03 - symbol:SPBC3B9.03 "signal recognitio... 464 1.1e-58 3
CGD|CAL0003010 - symbol:orf19.3952 species:5476 "Candida ... 499 2.6e-51 2
SGD|S000002700 - symbol:SRP101 "Signal recognition partic... 274 1.4e-27 3
TIGR_CMR|CJE_1340 - symbol:CJE_1340 "signal recognition p... 282 3.8e-24 1
TIGR_CMR|GSU_0642 - symbol:GSU_0642 "signal recognition p... 296 5.4e-24 1
TIGR_CMR|CJE_0809 - symbol:CJE_0809 "signal recognition p... 288 4.5e-23 1
TIGR_CMR|CBU_1903 - symbol:CBU_1903 "signal recognition p... 248 4.4e-22 2
TIGR_CMR|CHY_1434 - symbol:CHY_1434 "signal recognition p... 274 5.0e-22 2
TIGR_CMR|CBU_0450 - symbol:CBU_0450 "signal recognition p... 269 1.0e-20 1
TIGR_CMR|BA_3985 - symbol:BA_3985 "signal recognition par... 239 1.2e-20 2
UNIPROTKB|Q97QD2 - symbol:ffh "Signal recognition particl... 270 1.3e-20 1
TIGR_CMR|BA_3983 - symbol:BA_3983 "signal recognition par... 267 1.5e-20 1
TIGR_CMR|CHY_1442 - symbol:CHY_1442 "signal recognition p... 246 3.4e-20 1
TAIR|locus:2150620 - symbol:CPSRP54 "chloroplast signal r... 267 3.5e-20 1
TIGR_CMR|CPS_4073 - symbol:CPS_4073 "signal recognition p... 262 4.7e-20 2
TAIR|locus:2028563 - symbol:AT1G48900 species:3702 "Arabi... 260 1.4e-19 1
DICTYBASE|DDB_G0275455 - symbol:srp54 "signal recognition... 260 1.9e-19 1
NCBI_NP|NP_355632.2 - symbol:ffh "signal recognition part... 259 2.2e-19 1
WB|WBGene00009012 - symbol:F21D5.7 species:6239 "Caenorha... 257 3.2e-19 1
TAIR|locus:2037803 - symbol:ATHSRP54A "signal recognition... 256 3.6e-19 1
TIGR_CMR|SO_1356 - symbol:SO_1356 "signal recognition par... 255 3.9e-19 1
TIGR_CMR|APH_1227 - symbol:APH_1227 "signal recognition p... 234 7.0e-19 1
TIGR_CMR|NSE_0545 - symbol:NSE_0545 "signal recognition p... 234 7.0e-19 1
SGD|S000006292 - symbol:SRP54 "Signal recognition particl... 253 1.2e-18 1
POMBASE|SPCC188.06c - symbol:srp54 "signal recognition pa... 252 1.4e-18 1
UNIPROTKB|P0AGD7 - symbol:ffh species:83333 "Escherichia ... 250 2.4e-18 2
FB|FBgn0010747 - symbol:Srp54k "Signal recognition partic... 249 3.7e-18 1
TIGR_CMR|APH_0349 - symbol:APH_0349 "signal recognition p... 236 5.9e-18 2
TIGR_CMR|VC_0560 - symbol:VC_0560 "signal recognition par... 244 7.4e-18 1
TIGR_CMR|SPO_1339 - symbol:SPO_1339 "signal recognition p... 241 7.6e-18 1
TIGR_CMR|ECH_0475 - symbol:ECH_0475 "signal recognition p... 240 1.7e-17 2
UNIPROTKB|G3V4F7 - symbol:SRP54 "Signal recognition parti... 240 1.8e-17 1
UNIPROTKB|Q2T9U1 - symbol:SRP54 "Signal recognition parti... 240 2.8e-17 1
UNIPROTKB|P61010 - symbol:SRP54 "Signal recognition parti... 240 2.8e-17 1
UNIPROTKB|P61011 - symbol:SRP54 "Signal recognition parti... 240 2.8e-17 1
UNIPROTKB|F2Z5M9 - symbol:SRP54 "Uncharacterized protein"... 240 2.8e-17 1
UNIPROTKB|Q4R965 - symbol:SRP54 "Signal recognition parti... 240 2.8e-17 1
UNIPROTKB|Q5R4R6 - symbol:SRP54 "Signal recognition parti... 240 2.8e-17 1
TIGR_CMR|VC_0147 - symbol:VC_0147 "signal recognition par... 235 3.9e-17 1
RGD|2323636 - symbol:Fam177a1 "family with sequence simil... 238 4.5e-17 1
RGD|621390 - symbol:Srp54 "signal recognition particle 54... 238 4.6e-17 1
ZFIN|ZDB-GENE-040426-818 - symbol:srp54 "signal recogniti... 238 4.6e-17 1
UNIPROTKB|P10121 - symbol:ftsY "SRP receptor" species:833... 236 7.5e-17 1
TIGR_CMR|ECH_1111 - symbol:ECH_1111 "signal recognition p... 223 7.7e-17 1
UNIPROTKB|Q97QH0 - symbol:ftsY "Signal recognition partic... 234 7.7e-17 1
UNIPROTKB|E1C6G6 - symbol:SRP54 "Uncharacterized protein"... 236 7.8e-17 1
GENEDB_PFALCIPARUM|PF14_0477 - symbol:PF14_0477 "signal r... 235 9.8e-17 1
UNIPROTKB|Q8IKX4 - symbol:PF14_0477 "Signal recognition p... 235 9.8e-17 1
UNIPROTKB|P83749 - symbol:ftsY "Signal recognition partic... 220 1.2e-16 1
UNIPROTKB|O07347 - symbol:ffh "Signal recognition particl... 234 1.3e-16 2
TIGR_CMR|SPO_3246 - symbol:SPO_3246 "signal recognition p... 227 8.2e-16 1
UNIPROTKB|P66842 - symbol:ftsY "Signal recognition partic... 224 1.0e-15 1
UNIPROTKB|P66844 - symbol:ffh "Signal recognition particl... 225 1.1e-15 2
TAIR|locus:2157809 - symbol:AT5G49500 "AT5G49500" species... 223 2.1e-15 1
TIGR_CMR|CPS_0157 - symbol:CPS_0157 "signal recognition p... 214 2.0e-14 1
TIGR_CMR|SO_4586 - symbol:SO_4586 "signal recognition par... 213 3.0e-14 1
CGD|CAL0003314 - symbol:SRP54 species:5476 "Candida albic... 213 3.6e-14 1
TIGR_CMR|GSU_1132 - symbol:GSU_1132 "signal recognition p... 207 4.1e-14 1
TIGR_CMR|NSE_0540 - symbol:NSE_0540 "signal recognition p... 181 8.0e-11 1
UNIPROTKB|Q722L6 - symbol:LMOf2365_0717 "Putative flagell... 175 3.0e-10 1
TIGR_CMR|CJE_0061 - symbol:CJE_0061 "flagellar biosynthet... 166 4.2e-09 1
TIGR_CMR|CHY_1010 - symbol:CHY_1010 "flagellar biosynthes... 141 1.3e-06 1
UNIPROTKB|Q81SE2 - symbol:BA_1718 "Putative flagellar bio... 124 5.6e-05 1
TIGR_CMR|BA_1718 - symbol:BA_1718 "flagellar biosynthetic... 124 5.6e-05 1
UNIPROTKB|Q48GG0 - symbol:flhF "Flagellar biosynthesis pr... 118 0.00069 1
UNIPROTKB|Q8ECD1 - symbol:flhF "Flagellar polar localizat... 117 0.00094 1
TIGR_CMR|SO_3212 - symbol:SO_3212 "flagellar biosynthetic... 117 0.00094 1
>TAIR|locus:2118701 [details] [associations]
symbol:AT4G30600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006605 "protein targeting" evidence=ISS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005783 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003924
EMBL:AL161577 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
HOGENOM:HOG000201671 OMA:LILWSSC EMBL:AY065066 EMBL:AY133612
IPI:IPI00534083 PIR:A85358 RefSeq:NP_194789.1 UniGene:At.4581
HSSP:P83749 ProteinModelPortal:Q9M0A0 SMR:Q9M0A0 STRING:Q9M0A0
PaxDb:Q9M0A0 PRIDE:Q9M0A0 EnsemblPlants:AT4G30600.1 GeneID:829183
KEGG:ath:AT4G30600 TAIR:At4g30600 InParanoid:Q9M0A0
PhylomeDB:Q9M0A0 ProtClustDB:CLSN2685629 ArrayExpress:Q9M0A0
Genevestigator:Q9M0A0 Uniprot:Q9M0A0
Length = 634
Score = 1073 (382.8 bits), Expect = 1.2e-210, Sum P(2) = 1.2e-210
Identities = 218/258 (84%), Positives = 231/258 (89%)
Query: 332 KADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXX 391
+A LE + R+ + AAME+ALVRILTPRRSIDILRDVHAAKEQRKPY
Sbjct: 377 EASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGV 436
Query: 392 XXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPA 451
KSTNLAKVAYWL QHKVSVMMAACDTFRSGAVEQLRTHARRLQ+PIFEKGYEKDPA
Sbjct: 437 NGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 496
Query: 452 IVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDA 511
+VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLI LN PDLVLFVGEALVGNDA
Sbjct: 497 VVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDA 556
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
VDQLSKFNQKL+DLS+S NP+LIDGILLTKFDTIDDKVGAALSMVY+SG+PVMFVGCGQS
Sbjct: 557 VDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQS 616
Query: 572 YTDLKKLNVKSIVKTLLK 589
YTDLKKLNVK+IVKTLLK
Sbjct: 617 YTDLKKLNVKAIVKTLLK 634
Score = 986 (352.1 bits), Expect = 1.2e-210, Sum P(2) = 1.2e-210
Identities = 215/367 (58%), Positives = 249/367 (67%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
MLEQLLIFTRGGLILWTCKE+GNALKGSPIDTLIRSCLLEERSG SFNYD+ GAAYTLK
Sbjct: 1 MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTDYSDFDEMFRQXXXXX 120
WTFHN+LGLVFVAVYQRILHLLYVDDLL+M+KQSFSE+YDPKR Y DFDE FRQ
Sbjct: 61 WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120
Query: 121 XXXXXXXXXSKQVTKPMNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRGR--KL 178
+KQV KP+ + + + L
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVSTL 180
Query: 179 ENGHSNVGNVEIEE-SRVTG-VANGKENTSSNIGAFDVSKLQKLRNKG--GK----KTDT 230
NGHSN GN ++E+ S+ T +ANGKENTSSN+ A D+SKLQKLR+KG G+ KTD+
Sbjct: 181 TNGHSN-GNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDS 238
Query: 231 VVSKGSN-PDPKKKITKKNRVWDDSPP-ESKLDFTDPAGGNGSN--IEVEAADHGESMMD 286
+ +K S +P KK TKKNRVWDD+ P +SKLDFTD NG+N +++ AAD GESMMD
Sbjct: 239 IGNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMD 298
Query: 287 KXXXXXXXXXXXXXXXXGKHNKP-DAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDR 345
K G KP AKK GWFSS+FQSI GKANL++ DL PALKALK+R
Sbjct: 299 KEEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKER 358
Query: 346 LMTKNVA 352
LMTKNVA
Sbjct: 359 LMTKNVA 365
>DICTYBASE|DDB_G0277377 [details] [associations]
symbol:srpR "signal recognition particle receptor
alpha subunit" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA;ISS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 dictyBase:DDB_G0277377 GO:GO:0005525
GO:GO:0005789 GO:GO:0003924 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005785 GO:GO:0005047
HSSP:P08240 RefSeq:XP_642799.1 ProteinModelPortal:Q54ZR7
STRING:Q54ZR7 EnsemblProtists:DDB0252680 GeneID:8620992
KEGG:ddi:DDB_G0277377 OMA:LILWSSC ProtClustDB:CLSZ2846855
Uniprot:Q54ZR7
Length = 615
Score = 739 (265.2 bits), Expect = 3.1e-106, Sum P(3) = 3.1e-106
Identities = 147/237 (62%), Positives = 185/237 (78%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVS 413
ME+ + RILTP+R+IDILR+V A K +R PY KSTNLAKV YWL +
Sbjct: 379 MEDTITRILTPKRNIDILREVQAVKGKR-PYSIVFSGVNGVGKSTNLAKVCYWLTANGYK 437
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
M+AACDTFRSGA+EQL+THA RL V +FE+GY KD A VA++AI A G DVVL+DT
Sbjct: 438 CMLAACDTFRSGAIEQLKTHADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDT 497
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
GRMQ+NEPLM+ALSKL+ NN DLVLFVGEALVGND VDQL+KF++ L+ L+++ +
Sbjct: 498 TGRMQNNEPLMKALSKLVNQNNVDLVLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHI 557
Query: 534 --IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
IDGI+LTKFDTIDDKVGAA+SMVY +G P++F+G GQ+YTDLK++N+KS+VK+LL
Sbjct: 558 RTIDGIILTKFDTIDDKVGAAISMVYSTGHPILFLGTGQNYTDLKRMNIKSVVKSLL 614
Score = 249 (92.7 bits), Expect = 3.1e-106, Sum P(3) = 3.1e-106
Identities = 54/112 (48%), Positives = 74/112 (66%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ I T+GG++LW+ KE +KGSPI++LI+ LLEERS SF DS Y+LK
Sbjct: 1 MLDSFTILTKGGIVLWS-KEFAK-IKGSPINSLIKKVLLEERSAETSFQIDS----YSLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDP---KRTDYSDF 109
WTF NE L+FV VYQ+I LLY+++LL +K+ F ++Y K + SDF
Sbjct: 55 WTFSNEFDLIFVVVYQKIFTLLYIEELLTTVKKRFIKMYKDLLLKLKESSDF 106
Score = 97 (39.2 bits), Expect = 3.1e-106, Sum P(3) = 3.1e-106
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 176 RKLENGHSNVGNVEIEE-SRVTGVANGKENTSSNIGAF--DVSKLQKLRNKGGKKTDTVV 232
R+ +N +N+ ++ ++ S + ++G ++ ++ GA + + ++ N G KK V
Sbjct: 180 RRKQNKANNINDISSDDDSDDSDSSSGSDSEENSNGATKNQQTDVARIENSGYKKK---V 236
Query: 233 SKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXXX 290
+ KK R W+D K L+ + + NG+ I E MD
Sbjct: 237 KDTPDKQASSSTGKKARTWEDGKLSKKELEALNRSDNSNGTEIVREKIQKFNIDMD---- 292
Query: 291 XXXXXXXXXXXXXGKHNKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKN 350
++ +AK F F + G +DK DLEP L K L KN
Sbjct: 293 ---------VSSSDDDDEEEAKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKLHLTKKN 343
Query: 351 VA 352
VA
Sbjct: 344 VA 345
Score = 37 (18.1 bits), Expect = 6.3e-100, Sum P(3) = 6.3e-100
Identities = 14/71 (19%), Positives = 27/71 (38%)
Query: 208 NIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAG 267
N A +++K++ K +K + + N + DDS S D + +
Sbjct: 155 NERAIKEGRVEKVKRKEQEKKEKAERRKQNKANNINDISSDDDSDDSDSSSGSDSEENSN 214
Query: 268 GNGSNIEVEAA 278
G N + + A
Sbjct: 215 GATKNQQTDVA 225
>FB|FBgn0010391 [details] [associations]
symbol:Gtp-bp "GTP-binding protein" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007409
"axonogenesis" evidence=IEP] [GO:0050708 "regulation of protein
secretion" evidence=IEP] [GO:0005785 "signal recognition particle
receptor complex" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005789 GO:GO:0005811 EMBL:AE014298
GO:GO:0003924 GO:GO:0003723 GO:GO:0007409 GO:GO:0050708
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 OMA:LILWSSC EMBL:AY061329
EMBL:S65640 RefSeq:NP_524887.2 UniGene:Dm.129
ProteinModelPortal:Q9U5L1 SMR:Q9U5L1 IntAct:Q9U5L1 MINT:MINT-765133
STRING:Q9U5L1 PaxDb:Q9U5L1 EnsemblMetazoa:FBtr0073480 GeneID:47251
KEGG:dme:Dmel_CG2522 CTD:47251 FlyBase:FBgn0010391
GeneTree:ENSGT00550000074936 InParanoid:Q9U5L1 OrthoDB:EOG4W0VV7
PhylomeDB:Q9U5L1 GenomeRNAi:47251 NextBio:838983 Bgee:Q9U5L1
GermOnline:CG2522 Uniprot:Q9U5L1
Length = 614
Score = 748 (268.4 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 152/259 (58%), Positives = 192/259 (74%)
Query: 344 DRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 403
D + ++ A+ E+LVRIL+P+R IDI+RD +K +PY KSTNLAK+
Sbjct: 356 DSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNGRPYTIIFCGVNGVGKSTNLAKI 415
Query: 404 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDP 450
+WL+++ +V++AACDTFR+GAVEQLRTH R L V ++EKGY KD
Sbjct: 416 CFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALHPAAKHDGRNMVQLYEKGYGKDA 475
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
A +A EAI+ A DVVLVDTAGRMQDNEPLMR+LSKLI +NNPDLVLFVGEALVGN+
Sbjct: 476 AGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLSKLIKVNNPDLVLFVGEALVGNE 535
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
AVDQL KFNQ LAD SS+ NP +IDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ
Sbjct: 536 AVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQ 595
Query: 571 SYTDLKKLNVKSIVKTLLK 589
+Y DLK +NV ++V +L+K
Sbjct: 596 TYADLKAINVNAVVNSLMK 614
Score = 193 (73.0 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 46/116 (39%), Positives = 71/116 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ ++IFT+GG++LW GN+ S I++LIR +LEER+ A + Y+ A K
Sbjct: 1 MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK 58
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY-DPKRTDYSDFDEMFRQ 115
NEL LV+ A++Q+++ L Y+D LA M+ +F E Y D + D DFD +R+
Sbjct: 59 --LDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRR 112
Score = 126 (49.4 bits), Expect = 2.4e-104, Sum P(3) = 2.4e-104
Identities = 49/160 (30%), Positives = 71/160 (44%)
Query: 205 TSSNIGAFDVSKLQKLRNK--GGKKTDTVVSKGSNPDPKKKITKKNRVWD---DSPPESK 259
T S + + K +KLR K KKT SK S P+ K KK RVWD +S +
Sbjct: 177 TGSPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE---KAGKKPRVWDLGGNSKDAAL 233
Query: 260 LDFT--DPAGGNGSNIEVEAADHGESMM-DKXXXXXXXXXXXXXXXXGK-HNKPDAKK-- 313
LD + P NI E + ++ D G+ + +KK
Sbjct: 234 LDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEADNEDASSEGEAEEQVQSKKGK 293
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA 353
G S F+ I G + ADL+PAL+ ++D L++KNVA+
Sbjct: 294 RGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVAS 333
Score = 52 (23.4 bits), Expect = 1.5e-96, Sum P(3) = 1.5e-96
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGN 269
K + N+ K TV S D KK + K+ + ++PP SK + P G+
Sbjct: 129 KTMRSYNESQKSKKTVASMIQ--DDKKPVEKRVNI-QEAPPPSKSQPSSPPTGS 179
>UNIPROTKB|F1NXV4 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
OMA:LILWSSC GeneTree:ENSGT00550000074936 EMBL:AADN02042027
IPI:IPI00593518 Ensembl:ENSGALT00000001579 Uniprot:F1NXV4
Length = 644
Score = 731 (262.4 bits), Expect = 2.7e-101, Sum P(3) = 2.7e-101
Identities = 149/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++EALV+IL P+R +D+LRDV A+ R+PY KSTNLAK+++WL+++
Sbjct: 394 ALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGF 453
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V ++EKGY KD A +A EAI
Sbjct: 454 SVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRTMVQLYEKGYGKDAAGIAMEAIS 513
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 514 YARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFN 573
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 574 KALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 633
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 634 AKAVVAALMK 643
Score = 172 (65.6 bits), Expect = 2.7e-101, Sum P(3) = 2.7e-101
Identities = 42/101 (41%), Positives = 62/101 (61%)
Query: 1 MLEQLLIFTRGGLILWTCKEL-GNALKGS-PIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GGL+LW + + G A + P++ LIRS LL+ER G SF ++ A T
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVRGPASAATAPVNALIRSVLLQERGGNNSFTHE----ALT 56
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 57 LKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKY 97
Score = 135 (52.6 bits), Expect = 2.7e-101, Sum P(3) = 2.7e-101
Identities = 51/194 (26%), Positives = 79/194 (40%)
Query: 174 RGRKLENGHS-NVGNVEIEESRVTGVANGKEN-TSSNIGAFDVSKLQKLRNKGGKKTDTV 231
+G K E + N + + A KE T I + + K K G+K+
Sbjct: 173 KGSKKEGNEAVTASNKTAPGEKQSSAAGDKEELTKDEILQKNREEFFKRHMKAGEKS--- 229
Query: 232 VSKGSNPDPKKKITKKNRVWDDSPPESK-LDFTDPA-GGNGSNIEVEAADHGESMMDKXX 289
SK PD +K+ KK RVWD +K LD+++ GN +E D ++ D+
Sbjct: 230 -SKSPKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPMEDFDPDMALRDRNR 288
Query: 290 X--------XXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPAL 339
+KP KK G M + + G +L + D++P L
Sbjct: 289 EPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTRQDMDPVL 348
Query: 340 KALKDRLMTKNVAA 353
+ +KD L+ KNVAA
Sbjct: 349 EKMKDHLIAKNVAA 362
Score = 37 (18.1 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 216 KLQKLRNKGGKKTDTVVSKGSN 237
K++ +NKG KK SN
Sbjct: 166 KVKNKKNKGSKKEGNEAVTASN 187
>MGI|MGI:1914648 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005785 "signal recognition particle
receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 MGI:MGI:1914648 GO:GO:0005525 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:AK004967 EMBL:AK038017 EMBL:BC012512 EMBL:BC021839
IPI:IPI00119695 RefSeq:NP_080406.1 UniGene:Mm.284688
ProteinModelPortal:Q9DBG7 SMR:Q9DBG7 STRING:Q9DBG7
PhosphoSite:Q9DBG7 PaxDb:Q9DBG7 PRIDE:Q9DBG7
Ensembl:ENSMUST00000034541 GeneID:67398 KEGG:mmu:67398
UCSC:uc009osy.1 InParanoid:Q9DBG7 NextBio:324466 Bgee:Q9DBG7
Genevestigator:Q9DBG7 GermOnline:ENSMUSG00000032042 Uniprot:Q9DBG7
Length = 636
Score = 727 (261.0 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 148/250 (59%), Positives = 187/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++
Sbjct: 386 ALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 445
Query: 413 SVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 446 SVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIA 505
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 506 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 565
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 566 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 625
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 626 AKAVVAALMK 635
Score = 179 (68.1 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 123 (48.4 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 49/187 (26%), Positives = 76/187 (40%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
RG K E + + + +G++ G EN + K ++ K GK D S
Sbjct: 170 RGAKKEGSDGTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAA 353
+ KNVAA
Sbjct: 348 IAKNVAA 354
>RGD|1311504 [details] [associations]
symbol:Srpr "signal recognition particle receptor ('docking
protein')" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005047 "signal recognition particle
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:1311504 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 CTD:6734 HOGENOM:HOG000201671
HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:BC105782 IPI:IPI00362579 RefSeq:NP_001029322.1
UniGene:Rn.18349 SMR:Q3KRC3 STRING:Q3KRC3
Ensembl:ENSRNOT00000015177 GeneID:315548 KEGG:rno:315548
UCSC:RGD:1311504 InParanoid:Q3KRC3 NextBio:669402
Genevestigator:Q3KRC3 Uniprot:Q3KRC3
Length = 636
Score = 727 (261.0 bits), Expect = 1.7e-99, Sum P(3) = 1.7e-99
Identities = 148/250 (59%), Positives = 187/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++
Sbjct: 386 ALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 445
Query: 413 SVMMAACDTFRSGAVEQLRTHARRL-------------QVPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 446 SVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIA 505
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 506 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 565
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 566 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 625
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 626 AKAVVAALMK 635
Score = 179 (68.1 bits), Expect = 1.7e-99, Sum P(3) = 1.7e-99
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 115 (45.5 bits), Expect = 1.7e-99, Sum P(3) = 1.7e-99
Identities = 48/187 (25%), Positives = 75/187 (40%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVS 233
+G K E + + + +G+ G EN + K ++ K GK D S
Sbjct: 170 KGSKKEGSDGPLATSKTAPAEKSGLPVGPENGELSKEELIRRKREEFIQKHGKGLDKS-S 228
Query: 234 KGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAADHGESMMDKXXX 290
K + D PK+K K RVW+ +K LD++ P NG+ + D
Sbjct: 229 KSTKSDIPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGPGG 287
Query: 291 XXXXXXXXXXXXXG--KHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALKDRL 346
G ++ KP A K G M + + G +L + D+E L ++D L
Sbjct: 288 QLQDLDCSSSDDEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHL 347
Query: 347 MTKNVAA 353
+ KNVAA
Sbjct: 348 IAKNVAA 354
>UNIPROTKB|Q3MHE8 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
EMBL:BC105264 IPI:IPI00695733 RefSeq:NP_001068590.1 UniGene:Bt.5518
HSSP:P08240 ProteinModelPortal:Q3MHE8 SMR:Q3MHE8 STRING:Q3MHE8
PRIDE:Q3MHE8 GeneID:281504 KEGG:bta:281504 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 InParanoid:Q3MHE8
OrthoDB:EOG4W0XCP NextBio:20805473 Uniprot:Q3MHE8
Length = 639
Score = 726 (260.6 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 148/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 389 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 448
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 449 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIA 508
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 509 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 568
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 569 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 628
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 629 AKAVVAALMK 638
Score = 179 (68.1 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 104 (41.7 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 47/190 (24%), Positives = 72/190 (37%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAA 353
D L+ KNVAA
Sbjct: 348 DHLIAKNVAA 357
Score = 52 (23.4 bits), Expect = 8.8e-93, Sum P(3) = 8.8e-93
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>UNIPROTKB|P08240 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005047 "signal recognition particle binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006613
"cotranslational protein targeting to membrane" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0016021 Reactome:REACT_116125 GO:GO:0006987 EMBL:CH471065
GO:GO:0006412 GO:GO:0003924 SUPFAM:SSF64356 eggNOG:COG0552
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
PDB:2GO5 PDBsum:2GO5 PDB:2FH5 PDBsum:2FH5 CTD:6734
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X06272 EMBL:AK312377 EMBL:AP001318 EMBL:BC001162 EMBL:BC009110
EMBL:BC013583 IPI:IPI00385267 PIR:A29440 RefSeq:NP_001171313.1
RefSeq:NP_003130.2 UniGene:Hs.368376 ProteinModelPortal:P08240
SMR:P08240 IntAct:P08240 MINT:MINT-1404634 STRING:P08240
PhosphoSite:P08240 DMDM:20455516 PaxDb:P08240 PRIDE:P08240
DNASU:6734 Ensembl:ENST00000332118 GeneID:6734 KEGG:hsa:6734
UCSC:uc001qdh.3 GeneCards:GC11M126132 HGNC:HGNC:11307 MIM:182180
neXtProt:NX_P08240 PharmGKB:PA36131 InParanoid:P08240 OMA:KEGSDGP
ChiTaRS:SRPR EvolutionaryTrace:P08240 GenomeRNAi:6734 NextBio:26272
ArrayExpress:P08240 Bgee:P08240 CleanEx:HS_SRPR
Genevestigator:P08240 GermOnline:ENSG00000182934 Uniprot:P08240
Length = 638
Score = 727 (261.0 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 148/250 (59%), Positives = 187/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ +++PY KSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
Score = 179 (68.1 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 94 (38.1 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 45/191 (23%), Positives = 76/191 (39%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKPVPAEKSGLPVGPEN-GVELSKEELIRRKREEFIQKHGRGMEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
+K + D PK+K K RVW+ +K LD++ P NG+ + D G
Sbjct: 229 -NKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTT-NGTPEAALSEDINLIRGTGS 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEGAAQNS-TKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAA 353
+D L+ KNVAA
Sbjct: 346 RDHLIAKNVAA 356
>UNIPROTKB|F1S754 [details] [associations]
symbol:SRPR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:CU466237 EMBL:FP102836 EMBL:GACC01000039
Ensembl:ENSSSCT00000016593 Uniprot:F1S754
Length = 638
Score = 726 (260.6 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 148/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPENHGGRTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
Score = 179 (68.1 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 95 (38.5 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 43/190 (22%), Positives = 71/190 (37%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E + + + +GV G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKEGSDGPLATSKAVPTEKSGVPVGPEN-GVELSKEELIRRKREEFIQKHGRGVEKS 228
Query: 232 VSKGSNPDPKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
+ PK+K K RVW S + LD++ P NG+ D G
Sbjct: 229 GKSTKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGPG 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP + K G M + + G +L + D+E L ++
Sbjct: 288 GQLQDLDCSSSDDEGATQNS-TKPSSTKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMR 346
Query: 344 DRLMTKNVAA 353
D L+ KNVAA
Sbjct: 347 DHLIAKNVAA 356
>ZFIN|ZDB-GENE-030219-11 [details] [associations]
symbol:srpr "signal recognition particle receptor
(docking protein)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
ZFIN:ZDB-GENE-030219-11 GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356
GO:GO:0006614 SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
CTD:6734 GeneTree:ENSGT00550000074936 EMBL:CU469519 IPI:IPI00799782
RefSeq:XP_697518.3 UniGene:Dr.79180 Ensembl:ENSDART00000086823
GeneID:569063 KEGG:dre:569063 NextBio:20889487 Uniprot:E7EZW6
Length = 650
Score = 744 (267.0 bits), Expect = 7.0e-97, Sum P(3) = 7.0e-97
Identities = 150/250 (60%), Positives = 189/250 (75%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++++LV+IL P+R +DILRDV A+ QRKP+ KSTNLAK++YWL+++
Sbjct: 400 ALQDSLVQILQPKRRVDILRDVLEARSQRKPFVITFCGVNGVGKSTNLAKISYWLIENGF 459
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
+V++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 460 TVLIAACDTFRAGAVEQLRTHQRRLNSLHPPEKHGGQPAVQLFEKGYGKDAAGIAMEAIA 519
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVL+DTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 520 FARNQGFDVVLIDTAGRMQDNAPLMTALAKLIAVNTPDLVLFVGEALVGNEAVDQLVKFN 579
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVG GQ+Y+DL+ LN
Sbjct: 580 RALADHSKSDKPRLIDGIVLTKFDTIDDKVGAAISMTYITGQPIVFVGTGQTYSDLRSLN 639
Query: 580 VKSIVKTLLK 589
+++V L+K
Sbjct: 640 ARAVVSALMK 649
Score = 146 (56.5 bits), Expect = 7.0e-97, Sum P(3) = 7.0e-97
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 1 MLEQLLIFTRGGLILWTCKELG--NALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYT 58
ML+ IF++GG++LW + G + G P++ LIRS +L+ERSG F +++ +
Sbjct: 1 MLDFFAIFSKGGIVLWCFQGAGVTESFTG-PVNALIRSVILQERSGNNFFTHNTL----S 55
Query: 59 LKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
LK+ NE LVFV +Q L L YVD + ++ F + Y
Sbjct: 56 LKYKLDNEFELVFVVGFQANLMLKYVDKFIDDVQLHFRDRY 96
Score = 106 (42.4 bits), Expect = 7.0e-97, Sum P(3) = 7.0e-97
Identities = 43/188 (22%), Positives = 82/188 (43%)
Query: 176 RKLENGHSNVGNVEIEESRVTGVAN---G----KENTSSNIGAFDVSKLQKLRNKGGKKT 228
+ +ENG ++ EIE +R ++ G K + S K+ ++ + GGK +
Sbjct: 195 KAVENGSESLTQDEIERNRAKFISKQLGGGKPEKPSKSPKPQGKPKGKVNRVWDMGGKSS 254
Query: 229 DTVVSKGSNPDPKKKITKKNRVWDDSPPESKLDFTDPAGGNGSNIEVEAADHGESMMDKX 288
+ G+N + ++ +D+ E + + G+ ++ E++D + +++
Sbjct: 255 GELDYSGTNGNNSNDAKSED---NDATAEPAIQ-VESMKGDLRGVDYESSDDEDEEVEEE 310
Query: 289 XXXXXXXXXXXXXXXGKHNKPDAKKTGWFSSMF---QSIAGKANLDKADLEPALKALKDR 345
K AK++G F MF + + G NL + D+EP L +KD
Sbjct: 311 EKKVVVTNT---------KKTGAKRSG-FGGMFGMLKGLVGSKNLTQEDMEPVLDKMKDH 360
Query: 346 LMTKNVAA 353
L+ KNVAA
Sbjct: 361 LIAKNVAA 368
>UNIPROTKB|P06625 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0005785 "signal
recognition particle receptor complex" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR007222
InterPro:IPR011012 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF04086 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005789 GO:GO:0003924
SUPFAM:SSF64356 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 Reactome:REACT_146484 GO:GO:0005047
HOGENOM:HOG000201671 HOVERGEN:HBG047566 OrthoDB:EOG4W0XCP
EMBL:X03184 PIR:A24570 ProteinModelPortal:P06625 SMR:P06625
STRING:P06625 PRIDE:P06625 InParanoid:P06625 Uniprot:P06625
Length = 638
Score = 718 (257.8 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 146/250 (58%), Positives = 185/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVE +RTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
Score = 179 (68.1 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 94 (38.1 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAA 353
+D L+ KNVAA
Sbjct: 346 RDHLIAKNVAA 356
>WB|WBGene00009521 [details] [associations]
symbol:F38A1.8 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] [GO:0005785 "signal recognition
particle receptor complex" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0018996 GO:GO:0003924 GO:GO:0048477
SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 GeneTree:ENSGT00550000074936
OMA:KEGSDGP EMBL:FO080472 EMBL:FO081324 EMBL:FO081776
RefSeq:NP_741303.2 ProteinModelPortal:G4RYA5 SMR:G4RYA5
EnsemblMetazoa:F38A1.8 GeneID:185438 KEGG:cel:CELE_F38A1.8
CTD:185438 WormBase:F38A1.8 NextBio:928280 Uniprot:G4RYA5
Length = 625
Score = 714 (256.4 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 147/243 (60%), Positives = 185/243 (76%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A+ E+LV++LTP+ +DILRDV AK +PY KSTNLAK+ +WL ++K
Sbjct: 382 AVRESLVQLLTPKHRVDILRDVIEAKRDGRPYVIVFCGVNGVGKSTNLAKITFWLTENKH 441
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRNGS 466
V++AA DTFR+GAVEQLRTHAR L V + E+GY KDPA +A AI++A
Sbjct: 442 RVLIAAGDTFRAGAVEQLRTHARYLNDLHKNSVLLHEQGYGKDPAGLAAAAIKKAAEQDF 501
Query: 467 DVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
DVVLVDTAGRMQDNEPLMR L+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LA+ +
Sbjct: 502 DVVLVDTAGRMQDNEPLMRELAKLIRVNEPDLVLFVGEALVGNEAVDQLVKFNEALANHA 561
Query: 527 S-SPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
S P+LIDGI+LTKFDTIDDKVGAA+SM Y++G P++FVGCGQ+Y+DL+ LNV ++V
Sbjct: 562 SPGQKPRLIDGIVLTKFDTIDDKVGAAVSMTYITGQPIVFVGCGQTYSDLRNLNVGAVVH 621
Query: 586 TLL 588
+LL
Sbjct: 622 SLL 624
Score = 139 (54.0 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 39/126 (30%), Positives = 62/126 (49%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
M+E IFT+GG+ LW +E + + LI+ L+EER + YT+K
Sbjct: 1 MIELFSIFTKGGVCLWNYQEGDYNFTEAINNELIKGTLMEERGNSGQKKVGN----YTMK 56
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSF----SE-------IYDPKRTDYSDF 109
+ NE ++F+ +YQ I++L Y + LL ++ SF SE + P Y +F
Sbjct: 57 FQLDNEYNVIFLVIYQTIVNLNYAEKLLNLVVDSFRGEFSENLREETALTTPPSNIYGNF 116
Query: 110 DEMFRQ 115
DE F +
Sbjct: 117 DETFHE 122
Score = 112 (44.5 bits), Expect = 1.3e-93, Sum P(3) = 1.3e-93
Identities = 41/158 (25%), Positives = 68/158 (43%)
Query: 204 NTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKG-SNPDPKKKITKKNRVW--DDSPPESK- 259
N++S G+ D L++ K + KG P K K+ RVW P + K
Sbjct: 194 NSASPPGSPDEEVLRRRDQMFKKMSGNTKKKGPEEPTSPKPKGKQARVWALSGKPADVKN 253
Query: 260 LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPD---AKKTG- 315
LD +DP + + + E ESM ++ + D K++G
Sbjct: 254 LDRSDPKENDENAADEEKNRFVESMKEQIGTLKGDLKSLQESDDEDEDDNDQQVVKQSGG 313
Query: 316 WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA 353
WFS M + + G+ L DL P ++ +++ L+ KNVA+
Sbjct: 314 WFS-MIKGLVGEKKLSAEDLNPLIEKMRENLILKNVAS 350
>UNIPROTKB|F1PLH3 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047 CTD:6734
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 RefSeq:XP_546411.3
Ensembl:ENSCAFT00000016629 GeneID:489293 KEGG:cfa:489293
Uniprot:F1PLH3
Length = 638
Score = 726 (260.6 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 148/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 388 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 447
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 448 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIA 507
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 508 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 567
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 568 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 627
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 628 AKAVVAALMK 637
Score = 143 (55.4 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWASRGASLGFLGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 94 (38.1 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 170 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 228
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 229 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 286
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 287 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 345
Query: 343 KDRLMTKNVAA 353
+D L+ KNVAA
Sbjct: 346 RDHLIAKNVAA 356
>UNIPROTKB|J9NTJ9 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 EMBL:AAEX03003376 EMBL:AAEX03003378
EMBL:AAEX03003377 EMBL:AAEX03003379 Ensembl:ENSCAFT00000045313
Uniprot:J9NTJ9
Length = 637
Score = 726 (260.6 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 148/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 387 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 446
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 447 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIA 506
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 507 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 566
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 567 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 626
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 627 AKAVVAALMK 636
Score = 133 (51.9 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + G +D S +ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWF-QGVSACCFGG-LDVSETSSSFQERGGNNSFTHE----ALTLK 54
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 55 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 93
Score = 94 (38.1 bits), Expect = 2.3e-92, Sum P(3) = 2.3e-92
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 169 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 227
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 228 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 285
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 286 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 344
Query: 343 KDRLMTKNVAA 353
+D L+ KNVAA
Sbjct: 345 RDHLIAKNVAA 355
>UNIPROTKB|J9P788 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9615 "Canis lupus familiaris" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0005785 "signal recognition particle receptor
complex" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005047 "signal recognition particle binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005785 GO:GO:0005047
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:AAEX03003376
EMBL:AAEX03003378 EMBL:AAEX03003377 EMBL:AAEX03003379
Ensembl:ENSCAFT00000047935 Uniprot:J9P788
Length = 773
Score = 726 (260.6 bits), Expect = 5.3e-89, Sum P(3) = 5.3e-89
Identities = 148/250 (59%), Positives = 186/250 (74%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 523 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 582
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 583 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHAGRTMVQLFEKGYGKDAAGIAMEAIA 642
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 643 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 702
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLN 579
+ LAD S + P+LIDGI+LTKFDTIDDKVGAA+SM Y++ P++FVG GQ+Y DL+ LN
Sbjct: 703 RALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLN 762
Query: 580 VKSIVKTLLK 589
K++V L+K
Sbjct: 763 AKAVVAALMK 772
Score = 101 (40.6 bits), Expect = 5.3e-89, Sum P(3) = 5.3e-89
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 17 TCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLKWTFHNELGLVFVAVYQ 76
TC+ + T R+ EER G SF ++ A TLK+ N+ LVFV +Q
Sbjct: 151 TCRRRSGHTEVGARRTGPRARAAEERGGNNSFTHE----ALTLKYKLDNQFELVFVVGFQ 206
Query: 77 RILHLLYVDDLLAMMKQSFSEIY 99
+IL L YVD L+ + + F + Y
Sbjct: 207 KILTLTYVDKLIDDVHRLFRDKY 229
Score = 94 (38.1 bits), Expect = 5.3e-89, Sum P(3) = 5.3e-89
Identities = 46/191 (24%), Positives = 76/191 (39%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDV--SKLQKLRNKGGKKTDTV 231
+G K E+ + + + +G+ G EN + ++ K ++ K G+ +
Sbjct: 305 KGAKKESSDGPLATGKAVPAEKSGLPAGPEN-GVELSKEELIRRKREEFIQKHGRGLEKS 363
Query: 232 VSKGSNPD-PKKKITKKNRVWDDSPPESK--LDFTDPAGGNGSNIEVEAAD----HGESM 284
SK + D PK+K K RVW +K LD++ P NG+ D G
Sbjct: 364 -SKSTKSDAPKEKGKKAPRVWALGGCANKEVLDYSAPTT-NGAPDAAPPEDINLIRGTGP 421
Query: 285 MDKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKAL 342
+ +KP A K G M + + G +L + D+E L +
Sbjct: 422 GGQLQDLDCSSSDDEETAQNA-SKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKM 480
Query: 343 KDRLMTKNVAA 353
+D L+ KNVAA
Sbjct: 481 RDHLIAKNVAA 491
>UNIPROTKB|F1MNJ2 [details] [associations]
symbol:SRPR "Signal recognition particle receptor subunit
alpha" species:9913 "Bos taurus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005047
"signal recognition particle binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 SUPFAM:SSF64356 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005785 GO:GO:0005047 IPI:IPI00695733
GeneTree:ENSGT00550000074936 OMA:KEGSDGP EMBL:DAAA02063109
Ensembl:ENSBTAT00000018762 Uniprot:F1MNJ2
Length = 598
Score = 602 (217.0 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 127/210 (60%), Positives = 155/210 (73%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
A++E+LV+IL P+R +D+LRD+ A+ ++PY KSTNLAK+++WLL++
Sbjct: 389 ALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGF 448
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQ-------------VPIFEKGYEKDPAIVAKEAIQ 459
SV++AACDTFR+GAVEQLRTH RRL V +FEKGY KD A +A EAI
Sbjct: 449 SVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIA 508
Query: 460 EATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFN 519
A G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN
Sbjct: 509 FARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFN 568
Query: 520 QKLADLSSSPNPQLIDGILLTKFDTIDDKV 549
+ LAD S + P+LIDGI+LTKFDTIDDKV
Sbjct: 569 RALADHSMAQTPRLIDGIVLTKFDTIDDKV 598
Score = 179 (68.1 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGAAYTLK 60
ML+ IF++GGL+LW + + ++ G P++ LIRS LL+ER G SF ++ A TLK
Sbjct: 1 MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 55
Query: 61 WTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
+ N+ LVFV +Q+IL L YVD L+ + + F + Y
Sbjct: 56 YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94
Score = 104 (41.7 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 47/190 (24%), Positives = 72/190 (37%)
Query: 174 RGRKLENGHSNVGNVEIEESRVTGVANGKENTSSNIGAFDVS-KLQKLRNKGGKKTDTVV 232
+G K E + + + +G+ G EN + K ++ K G+ +
Sbjct: 171 KGAKKEGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIRRKREEFIQKHGRGMEKS- 229
Query: 233 SKGSNPD-PKKKITKKNRVW--DDSPPESKLDFTDPAGGNGSNIEVEAAD----HGESMM 285
SK S D PK+K K RVW S + LD++ P NG+ D G
Sbjct: 230 SKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTT-NGAPEAAPPEDINLIRGTGP- 287
Query: 286 DKXXXXXXXXXXXXXXXXGKHNKPDAKK--TGWFSSMFQSIAGKANLDKADLEPALKALK 343
+ KP A K G M + + G +L + D+E L ++
Sbjct: 288 GRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESVLDKMR 347
Query: 344 DRLMTKNVAA 353
D L+ KNVAA
Sbjct: 348 DHLIAKNVAA 357
Score = 52 (23.4 bits), Expect = 9.2e-80, Sum P(3) = 9.2e-80
Identities = 31/136 (22%), Positives = 51/136 (37%)
Query: 206 SSNIGAFDVSKLQKLRNKGGKKTDTVV-SKGSNPDPKKKITKKNRVWDDSPPESKLDFTD 264
SS I A K + K K +++ ++G P K K KKN+ + L +
Sbjct: 127 SSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKKEGSDGPLATSK 186
Query: 265 PAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXG-----KHNKPDA-KKTGWFS 318
A S + V ++GE + + G K +K DA K+ G +
Sbjct: 187 AAPAEKSGLPV-GPENGEELSKEEQIRRKREEFIQKHGRGMEKSSKSSKSDAPKEKGKKA 245
Query: 319 SMFQSIAGKANLDKAD 334
++ G AN + D
Sbjct: 246 PRVWALGGSANKEVLD 261
>ASPGD|ASPL0000006202 [details] [associations]
symbol:AN6627 species:162425 "Emericella nidulans"
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005785
"signal recognition particle receptor complex" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0045047 "protein targeting to ER" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005047 "signal
recognition particle binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 Pfam:PF04086
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 EMBL:BN001301 SUPFAM:SSF64356
EMBL:AACD01000110 eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364
KO:K13431 GO:GO:0005785 GO:GO:0005047 HOGENOM:HOG000201671
OrthoDB:EOG42Z7ZQ RefSeq:XP_664231.1 ProteinModelPortal:Q5AYK3
STRING:Q5AYK3 EnsemblFungi:CADANIAT00007408 GeneID:2870372
KEGG:ani:AN6627.2 OMA:THETGRR Uniprot:Q5AYK3
Length = 636
Score = 490 (177.5 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 109/253 (43%), Positives = 152/253 (60%)
Query: 352 AAMEEALVRILTPRRSIDILRDVHAAKEQRK-----PYXXXXXXXXXXXKSTNLAKVAYW 406
+AME +L +ILTP S+D+L ++ + K PY KSTNL K+ Y+
Sbjct: 390 SAMESSLRKILTPTSSLDLLHEIDTVTKANKQGTSRPYVISIVGVNGVGKSTNLGKICYF 449
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ----------VPIFEKGYEKDPAIVAKE 456
LLQ+ +++AACDTFRSGAVEQLR HAR L+ V ++EKGY KD A VAK+
Sbjct: 450 LLQNNYRILIAACDTFRSGAVEQLRVHARNLKELSARENVGAVELYEKGYGKDAANVAKD 509
Query: 457 AIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLS 516
A++ N DVVL+DTAGR +++ LM +L K P+ + VGEALVG D+V Q
Sbjct: 510 AVEYGAANNFDVVLIDTAGRRHNDQRLMSSLEKFAKFAQPNKIFMVGEALVGTDSVMQAR 569
Query: 517 KFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
FNQ + N +DG +++K DT+ D VG +SMV+ +G P++F+G GQ Y DL+
Sbjct: 570 NFNQAFG---TGRN---LDGFIISKCDTVGDMVGTLVSMVHATGIPIVFLGVGQHYGDLR 623
Query: 577 KLNVKSIVKTLLK 589
L+V V L+K
Sbjct: 624 GLSVPWAVNLLMK 636
Score = 131 (51.2 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGLASFNYDSAGA----A 56
MLE I + G++LW+ K + +++L+ +EE++ L + +
Sbjct: 1 MLEAFEILSTSGVVLWS-KSYA-PVGAHVVNSLVNDVFIEEKAQLQNATNSVSPIFKKEK 58
Query: 57 YTLKWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIY 99
YTLKW + L+FVAVYQ +LHL ++D LL + F ++Y
Sbjct: 59 YTLKWRKSKDFNLIFVAVYQSLLHLGWIDKLLDNISTIFVDLY 101
Score = 83 (34.3 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEALVRI 361
+ ++I G L +ADLE LKA++D L+ KNVA EA VR+
Sbjct: 326 LLRNIVGGKILTEADLEKPLKAMEDHLLKKNVA--REAAVRL 365
Score = 48 (22.0 bits), Expect = 2.3e-70, Sum P(4) = 2.3e-70
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 229 DTVVSKGSNPDPKKKITKKNRVWD-----DSPPESKLDFTDPA 266
D V KG P KK+ RVWD D LD++ PA
Sbjct: 221 DEQVRKGKTPKSGKKL----RVWDADGLADEDDGRVLDYSAPA 259
>POMBASE|SPBC3B9.03 [details] [associations]
symbol:SPBC3B9.03 "signal recognition particle receptor
alpha subunit Srp101 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISM] [GO:0005047
"signal recognition particle binding" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005785 "signal recognition particle receptor complex"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR007222 InterPro:IPR011012 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPBC3B9.03
GO:GO:0005525 GO:GO:0005829 GO:GO:0005634 EMBL:CU329671
GO:GO:0003924 GenomeReviews:CU329671_GR SUPFAM:SSF64356
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 KO:K13431
GO:GO:0005785 GO:GO:0005047 HSSP:Q6MTB9 HOGENOM:HOG000201671
PIR:T40342 RefSeq:NP_596660.1 ProteinModelPortal:O43032
STRING:O43032 EnsemblFungi:SPBC3B9.03.1 GeneID:2540909
KEGG:spo:SPBC3B9.03 OMA:PVEANND OrthoDB:EOG42Z7ZQ NextBio:20802024
Uniprot:O43032
Length = 547
Score = 464 (168.4 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 98/244 (40%), Positives = 143/244 (58%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAA-KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHK 411
A + L +ILTP S+D+L + + K + +PY KST LAK+AYWLL +
Sbjct: 311 AFRDRLTQILTPSTSLDLLHSIRSVRKNENRPYTISLIGVNGVGKSTTLAKIAYWLLSNN 370
Query: 412 VSVMMAACDTFRSGAVEQLRTHARRLQ------VPIFEKGYEKDPAIVAKEAIQEATRNG 465
+++AACDTFRSGA+EQL H + LQ + +F +GY KD + V K A++ A +N
Sbjct: 371 FRILVAACDTFRSGAIEQLGVHVKNLQSLKGSSIELFAQGYGKDSSFVVKNAVEYAKQNS 430
Query: 466 SDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADL 525
DV+L+DTAGR +++ LM +L K D + V EALVG D++ Q F A L
Sbjct: 431 FDVILIDTAGRRHNDQRLMGSLEKFTKATKLDKIFQVAEALVGTDSLAQAKHFQ---ASL 487
Query: 526 SSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVK 585
P +DG +++K DT+ VG + MVY P++FVG GQ+Y+DL+ L+V +V
Sbjct: 488 YHRP----LDGFIISKVDTVGQLVGVMVGMVYAVRVPIIFVGIGQTYSDLRTLSVDWVVD 543
Query: 586 TLLK 589
L+K
Sbjct: 544 QLMK 547
Score = 87 (35.7 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLL-EERSGLASFNYDSAGAAYTL 59
M++ I +GG++LW K+ + + + L L E+R+ + +D YT+
Sbjct: 1 MIDLFAIVNKGGIVLW--KKTNSLVNLKCLQVLFHEAFLSEQRTVNNTVTFDR----YTM 54
Query: 60 KWTFHNELGLVFVAVYQRILHLLYVDDLLAMMKQSFSEIYDPKRTD 105
++ + +VFV V+Q + + Y LL F ++ K D
Sbjct: 55 QYQEATQYSIVFVVVFQDLKCMAYSQSLLNSAHNIFLNLFKEKLED 100
Score = 81 (33.6 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 36/156 (23%), Positives = 60/156 (38%)
Query: 200 NGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPESK 259
N + S + A + + +K +N+ K SK +N PKK K+ R WDD E +
Sbjct: 126 NETDTKSLPVEANNDNSARK-KNEYEMKKKGAQSKQTNA-PKKG-KKQLRKWDDQITEEE 182
Query: 260 ---LDFTDPAGGNGSNIEVEAADHGESMMDKXXXXXXXXXXXXXXXXGKHNKPDAKKTGW 316
L+++ A ++ +K + K
Sbjct: 183 QAALNYSSQASSASQTVDNSQLSSIVGNNNKFQKTGSGDVIISDLEMDPNQTISNKSASS 242
Query: 317 FSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA 352
S+F ++ G L + DL P LK +++ L KNVA
Sbjct: 243 AFSLFSNLIGGKYLKEEDLSPILKQMQEHLTKKNVA 278
>CGD|CAL0003010 [details] [associations]
symbol:orf19.3952 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045047 "protein targeting to ER" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005047 "signal recognition
particle binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR007222 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF04086 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 CGD:CAL0003010 GO:GO:0005525
GO:GO:0003924 EMBL:AACQ01000012 eggNOG:COG0552 GO:GO:0006614
SUPFAM:SSF47364 KO:K13431 GO:GO:0005785 GO:GO:0005047
RefSeq:XP_721861.1 ProteinModelPortal:Q5AK68 STRING:Q5AK68
GeneID:3636513 KEGG:cal:CaO19.3952 Uniprot:Q5AK68
Length = 535
Score = 499 (180.7 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 112/275 (40%), Positives = 161/275 (58%)
Query: 330 LDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKE-QRKPYXXXX 388
+DK ++ L A K M A+ + L +ILTP S D+L D+ E +PY
Sbjct: 269 IDK--IKTKLSANKKVTMAVYKQALTDELTKILTPNVSTDLLHDIKRNAELNTRPYVISV 326
Query: 389 XXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL----------- 437
KSTNLAK+A+W LQ+ ++V++ ACDTFRSGAVEQL+ H L
Sbjct: 327 VGVNGVGKSTNLAKLAFWFLQNNLNVLICACDTFRSGAVEQLKVHVNNLNRLNEASTNTK 386
Query: 438 -QVPIFEKGYEKDPAIV--AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN 494
++ IFEKGY +V AK+A+Q A N D+VL+DTAGR N LM L K
Sbjct: 387 SRIDIFEKGYGSGDHVVQTAKQAVQYAEENKFDIVLIDTAGRTHSNAKLMAPLKKFGDAA 446
Query: 495 NPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALS 554
NP+ ++ VGEALVG D+V+Q + FN+ N + +D +++K DT+ D VG ++
Sbjct: 447 NPNKIIMVGEALVGTDSVEQATNFNKAFG------NKRTLDFFIISKVDTVGDLVGTMIN 500
Query: 555 MVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
MV + P++FVG GQ+YTD+K+L+VK +V+ L+K
Sbjct: 501 MVMATNVPILFVGTGQTYTDIKRLSVKQVVEMLMK 535
Score = 51 (23.0 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV 351
+G+FS + + G N+D+ K +++L+TKN+
Sbjct: 228 SGFFSKISSYLGGTINVDEVS-----KKFREQLITKNI 260
>SGD|S000002700 [details] [associations]
symbol:SRP101 "Signal recognition particle (SRP) receptor
alpha subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005525
"GTP binding" evidence=IEA;IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA;IC;TAS]
[GO:0005047 "signal recognition particle binding" evidence=ISS;IMP]
[GO:0005785 "signal recognition particle receptor complex"
evidence=TAS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA;IDA] [GO:0045047 "protein targeting to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR011012
InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SGD:S000002700 GO:GO:0005525
EMBL:BK006938 GO:GO:0017111 SUPFAM:SSF64356 EMBL:U51031
eggNOG:COG0552 GO:GO:0006614 SUPFAM:SSF47364 RefSeq:NP_010578.3
GeneID:851886 KEGG:sce:YDR292C KO:K13431 RefSeq:NP_010582.3
GeneID:851890 KEGG:sce:YDR296W GO:GO:0005785 TCDB:3.A.5.8.1
GO:GO:0005047 PDB:1NRJ PDBsum:1NRJ HOGENOM:HOG000201671
GeneTree:ENSGT00550000074936 OrthoDB:EOG42Z7ZQ EMBL:M77274
PIR:S70121 ProteinModelPortal:P32916 SMR:P32916 DIP:DIP-1672N
IntAct:P32916 MINT:MINT-364995 STRING:P32916 PaxDb:P32916
PeptideAtlas:P32916 EnsemblFungi:YDR292C CYGD:YDR292c OMA:HVENLAQ
EvolutionaryTrace:P32916 NextBio:969862 Genevestigator:P32916
GermOnline:YDR292C InterPro:IPR015284 Pfam:PF09201 Uniprot:P32916
Length = 621
Score = 274 (101.5 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 60/152 (39%), Positives = 89/152 (58%)
Query: 439 VPIFEKGYEKDPAI--VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNP 496
V +FE GY + +AK+AI+ + D+VL+DTAGR ++ LM L P
Sbjct: 475 VELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMSPLKSFADQAKP 534
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D ++ VGEALVG D+V Q FN N +D +++K DT+ + +G ++MV
Sbjct: 535 DKIIMVGEALVGTDSVQQAKNFNDAFG---KGRN---LDFFIISKCDTVGEMLGTMVNMV 588
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
Y +G P++FVG GQ+YTDL+ L+VK V TL+
Sbjct: 589 YATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 620
Score = 201 (75.8 bits), Expect = 5.6e-19, Sum P(3) = 5.6e-19
Identities = 49/128 (38%), Positives = 74/128 (57%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAK----EQRK--PYXXXXXXXXXXXKSTNLAKVAYW 406
++ +AL +ILTP S+D+LR++ + + E+ K PY KSTNL+K+A+W
Sbjct: 361 SLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIVGVNGVGKSTNLSKLAFW 420
Query: 407 LLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE---KGYEKDPAIVAKEAIQ--EA 461
LLQ+ V++ ACDTFRSGAVEQLR H L + + +G + + ++ EA
Sbjct: 421 LLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGSKNKRGKTGNDYVELFEA 480
Query: 462 TRNGSDVV 469
GSD+V
Sbjct: 481 GYGGSDLV 488
Score = 97 (39.2 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 218 QKLRNKGGKKTDTVVSKGSNPDPKKKITKKNRVWDDSPPE--SKLDFTDPAGGNGSNIEV 275
+KLR+ GKK T N +K + + D+ E +KLDF+ N S + +
Sbjct: 189 KKLRDTKGKKQST-----GNVGSGRKWGRDGGMLDEMNHEDAAKLDFSSSNSHNSSQVAL 243
Query: 276 EAADHGESMMDKXXXXXXXXXXXXXXXXGKHNK----PDAKKTGWFSSMF----QSIAGK 327
++ + +S D+ ++ +AK +G+ S+ F + + G
Sbjct: 244 DSTINKDSFGDRTEGGDFLIKEIDDLLSSHKDEITSGNEAKNSGYVSTAFGFLQKHVLGN 303
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDIL 371
++++DL+ L+ L +L+TKNVA EA LT + S D++
Sbjct: 304 KTINESDLKSVLEKLTQQLITKNVAP--EA-ADYLTQQVSHDLV 344
Score = 48 (22.0 bits), Expect = 1.4e-27, Sum P(3) = 1.4e-27
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 1 MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCL---LEERSGLASFNYD 51
M +QL +FT G +L+ LG I++ I + + + +A+ N D
Sbjct: 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTD 54
>TIGR_CMR|CJE_1340 [details] [associations]
symbol:CJE_1340 "signal recognition particle-docking
protein FtsY" species:195099 "Campylobacter jejuni RM1221"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005737 GO:GO:0003924
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0031226
eggNOG:COG0552 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HOGENOM:HOG000036277
RefSeq:YP_179327.1 ProteinModelPortal:Q5HTQ8 STRING:Q5HTQ8
GeneID:3231847 KEGG:cjr:CJE1340 PATRIC:20044480 OMA:DLVTPKQ
BioCyc:CJEJ195099:GJC0-1366-MONOMER Uniprot:Q5HTQ8
Length = 288
Score = 282 (104.3 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 79/264 (29%), Positives = 134/264 (50%)
Query: 342 LKDRLMTKNVA-AMEEALVRILTPRRSI---DILRDV-----HAAKE--QRKPYXXXXXX 390
L++ L+ +V+ + E ++ L P+ + D+ R + + KE Q KP+
Sbjct: 31 LEEILLEADVSYEIVEEIIYYLPPQNEVKKEDLKRVMGSYFLYEKKETNQEKPFVELILG 90
Query: 391 XXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
K+T++AK+AY V++ ACDTFR+GA+EQL+ A+++ V I DP
Sbjct: 91 VNGAGKTTSIAKLAYLYKNQNQKVILGACDTFRAGAIEQLKLWAQKVDVDIVLTAQGHDP 150
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN------PDLVLFVGE 504
+ VA + I +A D V++DTAGR+Q+ + L L K++ ++N P + V +
Sbjct: 151 SAVAFDTISKAKAKDFDRVIIDTAGRLQNQKNLAHELEKIVRISNKALEGAPHRKILVLD 210
Query: 505 ALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVM 564
GN + Q FN+ + +DG+++TK D K GA S+ P+
Sbjct: 211 GTQGNAGILQAKAFNELVK----------LDGVIITKLDGTA-KGGALFSIARELELPIF 259
Query: 565 FVGCGQSYTDLKKLNVKSIVKTLL 588
+VG G+ TDL++ N + + TLL
Sbjct: 260 YVGVGEQMTDLQEFNANAYLDTLL 283
>TIGR_CMR|GSU_0642 [details] [associations]
symbol:GSU_0642 "signal recognition particle protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867
RefSeq:NP_951699.1 ProteinModelPortal:Q74FG7 GeneID:2685362
KEGG:gsu:GSU0642 PATRIC:22024031 BioCyc:GSUL243231:GH27-644-MONOMER
Uniprot:Q74FG7
Length = 452
Score = 296 (109.3 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 72/193 (37%), Positives = 112/193 (58%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T+ K+A L + ++ D +R A+EQL+T R+L V +F+ ++DP + +
Sbjct: 114 KTTSCGKLARLLKGQRRRPLLVPADVYRPAAIEQLKTLGRQLSVEVFDSRADQDPVDICR 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
EA++ AT NG DVV++DTAGR Q +E LM L ++ P +LFV +A+ G +AV+
Sbjct: 174 EALRYATLNGFDVVILDTAGRHQIDEYLMNELVRIKEAAEPREILFVADAMTGQEAVNVA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
S FN +L D++ G++LTK D D K GAALS+ V+G PV VG G+ L
Sbjct: 234 SGFNDRL-DIT---------GVVLTKLDG-DAKGGAALSIRAVTGKPVKLVGVGEKLDAL 282
Query: 576 KKLNVKSIVKTLL 588
+ + +V +L
Sbjct: 283 EVFHADRLVSRIL 295
>TIGR_CMR|CJE_0809 [details] [associations]
symbol:CJE_0809 "signal recognition particle protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
OMA:DSGKTEQ PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_178813.1
ProteinModelPortal:Q5HV72 STRING:Q5HV72 GeneID:3230759
KEGG:cjr:CJE0809 PATRIC:20043363 BioCyc:CJEJ195099:GJC0-824-MONOMER
Uniprot:Q5HV72
Length = 445
Score = 288 (106.4 bits), Expect = 4.5e-23, P = 4.5e-23
Identities = 73/193 (37%), Positives = 107/193 (55%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T+ K+A +L V++AACD R AVEQLR ++ +F EKDP VAK
Sbjct: 108 KTTSTIKLANYLKLRNKKVLVAACDLQRLAAVEQLRQLCEANEIELFFIENEKDPIRVAK 167
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
EA+++A + DV+LVDTAGR+ +E LM L + + NPD + +V +A+ G D V
Sbjct: 168 EALKKAESSMVDVLLVDTAGRLAIDEALMNELKAVKDVLNPDEIFYVADAMSGQDGVKTA 227
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+ FN+ L N I G++L+KFD D K G AL + G P+ F+G G+ DL
Sbjct: 228 ASFNEAL-------N---ISGVILSKFDA-DTKGGVALGIAKQIGIPLRFIGVGEKVADL 276
Query: 576 KKLNVKSIVKTLL 588
+ IV ++
Sbjct: 277 EVFIPDRIVSRIM 289
>TIGR_CMR|CBU_1903 [details] [associations]
symbol:CBU_1903 "signal recognition particle-docking
protein FtsY" species:227377 "Coxiella burnetii RSA 493"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0051301 GO:GO:0003924 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:NRIPDEL
RefSeq:NP_820880.1 HSSP:P10121 ProteinModelPortal:Q83AI3 SMR:Q83AI3
PRIDE:Q83AI3 GeneID:1209816 KEGG:cbu:CBU_1903 PATRIC:17932545
BioCyc:CBUR227377:GJ7S-1878-MONOMER Uniprot:Q83AI3
Length = 324
Score = 248 (92.4 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 78/272 (28%), Positives = 130/272 (47%)
Query: 325 AGKANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTP-RRSIDILRDVHAAKEQRKP 383
A ++ L+ + A K+L D + A++ L+ IL P ++ ++I P
Sbjct: 74 ATQSILNNLSQQVARKSLSDPKAL--IDALKIELLNILEPCQKHLEI---------SASP 122
Query: 384 YXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFE 443
+ K+T +AK+A++ K VM+AA DTFR+ A+EQL+T +R P+
Sbjct: 123 FVILTVGVNGVGKTTTIAKLAHFYQSQKKRVMLAAGDTFRAAAIEQLQTWGQRNNAPVIA 182
Query: 444 KGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLN---NPDL-- 498
+ D A V +A++ AT D+++ DTAGR+ LM L+K+ + NPD
Sbjct: 183 QQPGADSASVIYDAMEAATARHYDLLIADTAGRLHTQSHLMDELAKIKRVMKKINPDAPH 242
Query: 499 -VLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
L V +A G +A++Q +F++ + + GI +TK D K G ++
Sbjct: 243 ETLLVLDAGTGQNAINQAEQFHEHIG----------LTGIAITKLDGTA-KGGVIFAIAK 291
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
P+ F+G G+ DLK N K + L K
Sbjct: 292 KMQLPIRFIGMGEKIEDLKPFNAKEFIAALFK 323
Score = 37 (18.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 305 KHNKPDAKKTGWFSSMFQSI 324
K+N+ K GW + +S+
Sbjct: 13 KNNETSKPKKGWLGRLNESL 32
>TIGR_CMR|CHY_1434 [details] [associations]
symbol:CHY_1434 "signal recognition particle protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005048 "signal
sequence binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI RefSeq:YP_360266.1
ProteinModelPortal:Q3AC68 SMR:Q3AC68 STRING:Q3AC68 GeneID:3728502
KEGG:chy:CHY_1434 PATRIC:21275999
BioCyc:CHYD246194:GJCN-1433-MONOMER Uniprot:Q3AC68
Length = 446
Score = 274 (101.5 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 66/181 (36%), Positives = 101/181 (55%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T AK+AY L + ++ A D +R A++QL+ + VP+F G E+ P +AK
Sbjct: 114 KTTTAAKLAYLLKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMG-EQSPVDIAK 172
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
+I A N + V++DTAGR+ NE LM L K+ + +P +L V +A+ G DAV+
Sbjct: 173 ASINFAKSNLKNYVIIDTAGRLHINEELMDELKKIKDVVHPHEILLVVDAMTGQDAVNVA 232
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
FN +L + G++LTK D D K GAALS+ V+G P+ F G G+ +L
Sbjct: 233 KSFNDELG----------LTGVILTKLDG-DTKGGAALSVKAVTGCPIKFAGMGEKIENL 281
Query: 576 K 576
+
Sbjct: 282 E 282
Score = 44 (20.5 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNV 351
+F+ + GK L + D+ AL+ ++ L+ +V
Sbjct: 13 VFKKLKGKGRLTEEDVNLALREVRIALLEADV 44
>TIGR_CMR|CBU_0450 [details] [associations]
symbol:CBU_0450 "signal recognition particle protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
RefSeq:NP_819486.1 ProteinModelPortal:Q83E79 PRIDE:Q83E79
GeneID:1208334 KEGG:cbu:CBU_0450 PATRIC:17929591
BioCyc:CBUR227377:GJ7S-448-MONOMER Uniprot:Q83E79
Length = 461
Score = 269 (99.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 72/236 (30%), Positives = 121/236 (51%)
Query: 356 EALVRILTPRRSIDILRD--VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQ-HKV 412
EALV+++ + +L D V + P K+T +AK+A WLL+ K
Sbjct: 72 EALVKVVQDELT-HLLGDELVEINLNAQPPIVIVMAGLQGSGKTTTVAKLARWLLEIQKK 130
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
SVM+A+ D +R A++QL T A ++ F ++ P +AK A+++A + DV+++D
Sbjct: 131 SVMVASADVYRPAAIQQLETLASQINAIFFPTQADQKPVEIAKAALKQAEKQFMDVLILD 190
Query: 473 TAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQ 532
TAGR+ + LM + + P +L V ++++G DA + FN L P
Sbjct: 191 TAGRLHIDNVLMEEMKAISDAVTPTEILLVVDSMMGQDAANVAKSFNDTL------P--- 241
Query: 533 LIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ G++LTK D D + GAALSM ++ P+ FVG G+ L+ + + +L
Sbjct: 242 -LTGVILTKLDG-DTRGGAALSMRMITQKPIKFVGVGEKIDALEPFHPNRMASRIL 295
>TIGR_CMR|BA_3985 [details] [associations]
symbol:BA_3985 "signal recognition particle-docking protein
FtsY" species:198094 "Bacillus anthracis str. Ames" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 HSSP:P83749 HOGENOM:HOG000036277
RefSeq:NP_846227.1 RefSeq:YP_020624.1 RefSeq:YP_029949.1
ProteinModelPortal:Q81WJ0 SMR:Q81WJ0 DNASU:1086789
EnsemblBacteria:EBBACT00000008913 EnsemblBacteria:EBBACT00000016260
EnsemblBacteria:EBBACT00000019469 GeneID:1086789 GeneID:2817443
GeneID:2848220 KEGG:ban:BA_3985 KEGG:bar:GBAA_3985 KEGG:bat:BAS3698
OMA:LVYRYRK BioCyc:BANT260799:GJAJ-3756-MONOMER
BioCyc:BANT261594:GJ7F-3873-MONOMER Uniprot:Q81WJ0
Length = 329
Score = 239 (89.2 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 80/282 (28%), Positives = 133/282 (47%)
Query: 316 WFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNV-------AAMEEALVRILTPRRSI 368
+F + + + G A++ + + + LK+ + +N+ A + E L+ I +
Sbjct: 51 FFEELEEILIG-ADVGVSTVMELIDQLKEEVQRRNIQDPREVQAVISEKLIEIY--KGDS 107
Query: 369 DILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVE 428
D +V+ K+ K+T + K+A+ SV++AA DTFR+GA+E
Sbjct: 108 DFTNEVNMQKDGLT--VVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRAGAIE 165
Query: 429 QLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALS 488
QL R+ V + ++G DPA V +A+Q A DV+L DTAGR+Q+ LM+ L
Sbjct: 166 QLEVWGDRVGVEVIKQGSGSDPAAVMYDAVQAAKARNVDVLLCDTAGRLQNKVNLMKELE 225
Query: 489 KLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKF 542
K+ + P VL V +A G + + Q F + + N + GI+LTK
Sbjct: 226 KVKRVIEREVPGAPHEVLLVIDATTGQNGLSQAKTFRE-------ATN---VTGIVLTKL 275
Query: 543 DTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIV 584
D K G L++ PV FVG G+ DL++ + + V
Sbjct: 276 DGTA-KGGIVLAIRNEMDVPVKFVGLGEQMDDLQQFDPEQYV 316
Score = 46 (21.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 214 VSKLQKLRNKGGKKTDTVVSK 234
+S +KL+ K K+TDTV K
Sbjct: 1 MSFFKKLKEKISKQTDTVTEK 21
>UNIPROTKB|Q97QD2 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347
PIR:F95149 RefSeq:NP_345751.1 ProteinModelPortal:Q97QD2
EnsemblBacteria:EBSTRT00000025249 GeneID:931801 KEGG:spn:SP_1287
PATRIC:19706973 Uniprot:Q97QD2
Length = 523
Score = 270 (100.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 80/279 (28%), Positives = 138/279 (49%)
Query: 312 KKTGWFS-SMFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDI 370
+K G S S Q + L + + AL +KD + A+ ++ L P + I
Sbjct: 18 RKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIK 77
Query: 371 LRD-----------VHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHK-VSVMMAA 418
+ D K + P K+T K+A L + + +M A
Sbjct: 78 IVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIA 137
Query: 419 CDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAI-VAKEAIQEATRNGSDVVLVDTAGRM 477
D +R A++QL+T +++ VP+F G E PA+ + ++ +++A N +D VL+DTAGR+
Sbjct: 138 ADIYRPAAIDQLKTLGQQIDVPVFALGTEV-PAVEIVRQGLEQAQTNHNDYVLIDTAGRL 196
Query: 478 QDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGI 537
Q +E LM L + L P+ +L V +A++G +A + +FN +L + G+
Sbjct: 197 QIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLE----------VTGV 246
Query: 538 LLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLK 576
+LTK D D + GAALS+ +++G P+ F G G+ TD++
Sbjct: 247 ILTKIDG-DTRGGAALSVRHITGKPIKFTGTGEKITDIE 284
>TIGR_CMR|BA_3983 [details] [associations]
symbol:BA_3983 "signal recognition particle protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 RefSeq:NP_846225.1 RefSeq:YP_020622.1
RefSeq:YP_029947.1 HSSP:O07347 ProteinModelPortal:Q81WJ2 SMR:Q81WJ2
EnsemblBacteria:EBBACT00000009811 EnsemblBacteria:EBBACT00000016655
EnsemblBacteria:EBBACT00000023730 GeneID:1087538 GeneID:2820002
GeneID:2848277 KEGG:ban:BA_3983 KEGG:bar:GBAA_3983 KEGG:bat:BAS3696
BioCyc:BANT260799:GJAJ-3754-MONOMER
BioCyc:BANT261594:GJ7F-3871-MONOMER Uniprot:Q81WJ2
Length = 449
Score = 267 (99.0 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 64/194 (32%), Positives = 106/194 (54%)
Query: 396 KSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T K+A L + H M+ A D +R A++QL T ++L +P+F G + P +A
Sbjct: 114 KTTTTGKLANLLRKKHNRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIA 173
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
K+AI +A + D VL+DTAG + +E LM L+K+ + PD + V +A+ G DAV+
Sbjct: 174 KQAIAKAKEDHHDYVLIDTAGHLHIDEELMDELAKVKEVAKPDEIFLVVDAMTGQDAVNV 233
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
F+++L + G++LTK D D + GAALS+ V+ P+ F G G+
Sbjct: 234 AQSFHEQLG----------LTGVVLTKLDG-DTRGGAALSIKAVTNTPIKFAGMGEKLDA 282
Query: 575 LKKLNVKSIVKTLL 588
L+ + + + +L
Sbjct: 283 LEAFHPERMASRIL 296
>TIGR_CMR|CHY_1442 [details] [associations]
symbol:CHY_1442 "signal recognition particle-docking
protein FtsY" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047
"signal recognition particle binding" evidence=ISS] [GO:0009306
"protein secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0031226
eggNOG:COG0552 KO:K03110 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 RefSeq:YP_360274.1 ProteinModelPortal:Q3AC60
SMR:Q3AC60 STRING:Q3AC60 GeneID:3728659 KEGG:chy:CHY_1442
PATRIC:21276015 HOGENOM:HOG000036277 OMA:NRIPDEL
BioCyc:CHYD246194:GJCN-1441-MONOMER Uniprot:Q3AC60
Length = 303
Score = 246 (91.7 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 65/198 (32%), Positives = 104/198 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T + K+AY+ Q V++AA DTFR+ A+EQL ++ P+ ++ DPA VA
Sbjct: 114 KTTTIGKLAYYFKQQGKQVLLAAGDTFRAAAIEQLEIWGNKVGCPVIKQKEGSDPAAVAF 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGN 509
+A++ A DV+++DTAGR+ LM L K+ + PD VL V +A G
Sbjct: 174 DAVKAAIARKIDVLIIDTAGRLHTKTNLMEELRKVKRVIERELPGAPDEVLLVLDATTGQ 233
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
+A+ Q+ FN+ L DL+ G++LTK D K G + + P+ F+G G
Sbjct: 234 NALSQVEYFNKAL-DLT---------GLVLTKLDGTA-KGGVIIGIKSSYQIPIKFIGVG 282
Query: 570 QSYTDLKKLNVKSIVKTL 587
+ DL+ + + V+ L
Sbjct: 283 EKMDDLRPFDPQEFVEAL 300
>TAIR|locus:2150620 [details] [associations]
symbol:CPSRP54 "chloroplast signal recognition particle
54 kDa subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005048 "signal sequence binding" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0006617 "SRP-dependent cotranslational protein targeting to
membrane, signal sequence recognition" evidence=ISS] [GO:0008312
"7S RNA binding" evidence=IEA;ISS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0045038 "protein import into chloroplast
thylakoid membrane" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080085 "signal recognition particle, chloroplast targeting"
evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0003924
GO:GO:0006184 EMBL:AL162873 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 PDB:2HUG PDB:3UI2 PDBsum:2HUG
PDBsum:3UI2 TCDB:3.A.5.1.2 GO:GO:0080085 eggNOG:COG0541 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 EMBL:Z21970 EMBL:AF092168
EMBL:AY050999 EMBL:BT000976 IPI:IPI00538977 PIR:S36637
RefSeq:NP_196014.1 UniGene:At.435 ProteinModelPortal:P37107
SMR:P37107 DIP:DIP-752N IntAct:P37107 MINT:MINT-126488
STRING:P37107 PaxDb:P37107 PRIDE:P37107 ProMEX:P37107
EnsemblPlants:AT5G03940.1 GeneID:830273 KEGG:ath:AT5G03940
GeneFarm:1888 TAIR:At5g03940 HOGENOM:HOG000036164 InParanoid:P37107
OMA:DSGKTEQ PhylomeDB:P37107 ProtClustDB:CLSN2686225
EvolutionaryTrace:P37107 Genevestigator:P37107 GermOnline:AT5G03940
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 Uniprot:P37107
Length = 564
Score = 267 (99.0 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 66/181 (36%), Positives = 104/181 (57%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T AK+A +L + S M+ A D +R A++QL ++ VP++ G + PA +AK
Sbjct: 189 KTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAK 248
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
+ ++EA +N DVV++DTAGR+Q ++ +M L + NP VL V +A+ G +A +
Sbjct: 249 QGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALV 308
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
+ FN ++ I G +LTK D D + GAALS+ VSG P+ VG G+ DL
Sbjct: 309 TTFNVEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDL 357
Query: 576 K 576
+
Sbjct: 358 E 358
>TIGR_CMR|CPS_4073 [details] [associations]
symbol:CPS_4073 "signal recognition particle protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=ISS] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_270728.1
ProteinModelPortal:Q47WU4 SMR:Q47WU4 STRING:Q47WU4 GeneID:3519232
KEGG:cps:CPS_4073 PATRIC:21471017
BioCyc:CPSY167879:GI48-4086-MONOMER Uniprot:Q47WU4
Length = 463
Score = 262 (97.3 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 66/194 (34%), Positives = 106/194 (54%)
Query: 396 KSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T++AK+A +L + K V++ + D +R A++QL T A + V F ++ P +A
Sbjct: 113 KTTSVAKLAKFLTEREKKKVLVVSADVYRPAAIKQLETLAEEISVGFFPSDIKQKPIDIA 172
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
AI A +N DV++VDTAGR+ +E +M + +L NP LF +A+ G DA +
Sbjct: 173 NAAIDHAKKNFYDVLIVDTAGRLHIDENMMAEIQQLHAAINPIETLFTVDAMTGQDAANT 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
FN L P + GI+LTK D D + GAALS+ +++G P+ F+G G+
Sbjct: 233 AKAFNDAL------P----LTGIILTKTDG-DARGGAALSIRHITGKPIKFMGVGEKIEA 281
Query: 575 LKKLNVKSIVKTLL 588
L+ + I +L
Sbjct: 282 LEPFHPDRIASRIL 295
Score = 41 (19.5 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 10/59 (16%), Positives = 30/59 (50%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVA--AMEEALVRILTPRRSIDILRDV 374
S ++I+G+ L + +++ L+ ++ L+ +VA + E + ++ D+ + +
Sbjct: 10 SKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVIREFIAKVKEKAVGTDVSKSL 68
>TAIR|locus:2028563 [details] [associations]
symbol:AT1G48900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0003924 GO:GO:0006184 EMBL:AC084414 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 ProtClustDB:CLSN2686827
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 EMBL:U12127
EMBL:AY054273 EMBL:AY052331 EMBL:AF446864 IPI:IPI00531486
PIR:G96526 RefSeq:NP_564535.1 UniGene:At.23838
ProteinModelPortal:P49967 SMR:P49967 STRING:P49967 PaxDb:P49967
PRIDE:P49967 EnsemblPlants:AT1G48900.1 GeneID:841312
KEGG:ath:AT1G48900 GeneFarm:1889 TAIR:At1g48900 InParanoid:P49967
OMA:NVQHMSK PhylomeDB:P49967 Genevestigator:P49967
GermOnline:AT1G48900 Uniprot:P49967
Length = 495
Score = 260 (96.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 59/193 (30%), Positives = 99/193 (51%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T K AY+ + + DTFR+GA +QL+ +A + ++P + E DP +A
Sbjct: 114 KTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAV 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E + + D+++VDT+GR + L + ++ PDLV+FV ++ +G A DQ
Sbjct: 174 EGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F Q +A + +++TK D K G ALS V + +PV+F+G G+ +
Sbjct: 234 QAFKQSVA----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEF 282
Query: 576 KKLNVKSIVKTLL 588
+ +VK V LL
Sbjct: 283 EVFDVKPFVSRLL 295
>DICTYBASE|DDB_G0275455 [details] [associations]
symbol:srp54 "signal recognition particle 54 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 dictyBase:DDB_G0275455 GO:GO:0005525 GO:GO:0045335
GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 OMA:GQQVVKI RefSeq:XP_643640.1
HSSP:P61011 ProteinModelPortal:Q75K18 STRING:Q75K18
EnsemblProtists:DDB0232373 GeneID:8620227 KEGG:ddi:DDB_G0275455
Uniprot:Q75K18
Length = 542
Score = 260 (96.6 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 71/271 (26%), Positives = 131/271 (48%)
Query: 319 SMFQSIAGKANL-DKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAA 377
SM I + N+ DK L+ L R + K V E L+R+L P + + +
Sbjct: 45 SMSLIIQMRKNIKDKIKLDQMAAGLNKRKIIKQVVFDE--LIRLLDP--GVPLWKPTKG- 99
Query: 378 KEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL 437
K K+T++ K+AY+ + S + DTFR+GA +Q+R +A +
Sbjct: 100 ----KSNIVMFVGLQGAGKTTSVTKLAYFYKKKGFSTAIVCADTFRAGAFDQVRHNAAKA 155
Query: 438 QVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPD 497
++ + EKDP +VA+ + ++G+++++VDT+GR + + L + ++ PD
Sbjct: 156 KIHYYGSETEKDPVVVARTGVDIFKKDGTEIIIVDTSGRHKQDSELFEEMKQIETAVKPD 215
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVY 557
+FV ++ +G A +Q + F + + I++TK D + G A+S V
Sbjct: 216 NCIFVMDSSIGQAAYEQATAFRSSVK----------VGSIIITKMDG-NSMGGGAISAVA 264
Query: 558 VSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ P++F+G G+ TDL+ + + V LL
Sbjct: 265 ATNTPIIFIGTGEHLTDLELFDPSTFVSKLL 295
>NCBI_NP|NP_355632.2 [details] [associations]
symbol:ffh "signal recognition particle protein"
species:176299 "Agrobacterium fabrum str. C58" [GO:0009306 "protein
secretion" evidence=ISS] REFSEQ:NC_003062 Ncbi:NP_355632
Length = 523
Score = 259 (96.2 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 82/259 (31%), Positives = 126/259 (48%)
Query: 331 DKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXX 390
+KA LK++K M V + + LV +L + I D+HAA P
Sbjct: 57 EKAVGAAVLKSIKPGQMV--VKIVHDELVEMLGTE-GVSI--DLHAAA----PVVIMMVG 107
Query: 391 XXXXXKSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKD 449
K+T K+A L K V+MA+ DT R A EQLR + V +
Sbjct: 108 LQGSGKTTTTGKIAKRLTDRDKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQS 167
Query: 450 PAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGN 509
P +A A+Q A G DVV++DTAGR +EPLM ++ + +NP +L V ++L G
Sbjct: 168 PTDIAARAVQAAKLGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQ 227
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
DAV+ F++++ I G++LT+ D D + GAALSM V+G P+ +G G
Sbjct: 228 DAVNLARNFDERVG----------ITGLVLTRMDG-DGRGGAALSMRAVTGKPIKLIGIG 276
Query: 570 QSYTDLKKLNVKSIVKTLL 588
+ +L + + + I +L
Sbjct: 277 ERMNELDEFHPRRIADRIL 295
>WB|WBGene00009012 [details] [associations]
symbol:F21D5.7 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008312 "7S
RNA binding" evidence=IEA] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0006915 GO:GO:0002119 GO:GO:0003924
GO:GO:0006184 GO:GO:0000003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 EMBL:Z68161 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
OMA:GQQVVKI GO:GO:0048500 EMBL:Z54271 PIR:A88763 PIR:T21140
RefSeq:NP_501507.1 HSSP:P70722 ProteinModelPortal:G5EE80 SMR:G5EE80
EnsemblMetazoa:F21D5.7.1 EnsemblMetazoa:F21D5.7.2 GeneID:259584
KEGG:cel:CELE_F21D5.7 CTD:259584 WormBase:F21D5.7 NextBio:952170
Uniprot:G5EE80
Length = 496
Score = 257 (95.5 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 61/193 (31%), Positives = 106/193 (54%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP +A
Sbjct: 114 KTTTCTKMAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSEIDPVKIAA 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ T+ G ++++VDT+GR + L + ++ PD V+FV +A +G Q
Sbjct: 174 EGVEKFTQEGFEIIIVDTSGRHKQEASLFEEMLQVSNAVTPDNVVFVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F+Q + D++S +++TK D+ K G ALS V V+ +PV+F+G G+ D
Sbjct: 234 RAFSQTV-DVAS---------VIITKLDS-HAKGGGALSAVAVTKSPVIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ KS V+ LL
Sbjct: 283 EIFKPKSFVQKLL 295
>TAIR|locus:2037803 [details] [associations]
symbol:ATHSRP54A "signal recognition particle 54 kDa
subunit" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;ISS] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0051607
"defense response to virus" evidence=RCA] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003924 GO:GO:0006184 EMBL:AC007591 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 EMBL:L19997
EMBL:AF344329 EMBL:AY086187 IPI:IPI00526094 PIR:S42550
RefSeq:NP_563970.1 UniGene:At.24597 ProteinModelPortal:P37106
SMR:P37106 DIP:DIP-59002N STRING:P37106 PaxDb:P37106 PRIDE:P37106
EnsemblPlants:AT1G15310.1 GeneID:838100 KEGG:ath:AT1G15310
TAIR:At1g15310 eggNOG:COG0541 HOGENOM:HOG000036165
InParanoid:P37106 KO:K03106 OMA:KVIPPQM PhylomeDB:P37106
ProtClustDB:CLSN2686827 Genevestigator:P37106 GermOnline:AT1G15310
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
Uniprot:P37106
Length = 479
Score = 256 (95.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 65/235 (27%), Positives = 115/235 (48%)
Query: 354 MEEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVS 413
+E+A+ + L R +D + A K+ KP K+T K AY+ +
Sbjct: 75 IEQAIFKELC--RMLDPGKPAFAPKKA-KPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYK 131
Query: 414 VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDT 473
+ DTFR+GA +QL+ +A + ++P + E DP +A E + + D+++VDT
Sbjct: 132 AALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDT 191
Query: 474 AGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQL 533
+GR + L + ++ PDLV+FV ++ +G A +Q F + ++
Sbjct: 192 SGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVS---------- 241
Query: 534 IDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+ +++TK D K G ALS V + +PV+F+G G+ + + +VK V LL
Sbjct: 242 VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295
>TIGR_CMR|SO_1356 [details] [associations]
symbol:SO_1356 "signal recognition particle protein Ffh"
species:211586 "Shewanella oneidensis MR-1" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR001251
PROSITE:PS50191 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 HSSP:O07347 RefSeq:NP_716976.1
ProteinModelPortal:Q8EH73 GeneID:1169177 KEGG:son:SO_1356
PATRIC:23522366 Uniprot:Q8EH73
Length = 457
Score = 255 (94.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 66/194 (34%), Positives = 104/194 (53%)
Query: 396 KSTNLAKVAYWL-LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T++AK+ L +HK SV++ + D +R A++QL T A + V F + P +A
Sbjct: 113 KTTSVAKLGKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIA 172
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
K AI A DVV++DTAGR+ +E +M + L P LFV +A+ G DA +
Sbjct: 173 KAAIAHAKLKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANT 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
FN+ L P + G++LTK D D + GAALS+ +++G P+ F+G G+
Sbjct: 233 AKAFNEAL------P----LTGVILTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTDA 281
Query: 575 LKKLNVKSIVKTLL 588
L+ + I +L
Sbjct: 282 LEPFHPDRIASRIL 295
>TIGR_CMR|APH_1227 [details] [associations]
symbol:APH_1227 "signal recognition particle-docking
protein FtsY" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_505757.1 ProteinModelPortal:Q2GIP4 STRING:Q2GIP4
GeneID:3931129 KEGG:aph:APH_1227 PATRIC:20951240
BioCyc:APHA212042:GHPM-1232-MONOMER Uniprot:Q2GIP4
Length = 305
Score = 234 (87.4 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 61/200 (30%), Positives = 104/200 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +AK+A+ ++ +SV++ ACDTFR+ AVEQL A R+ PI D A VA
Sbjct: 116 KTTTVAKLAHKFMKKNMSVIIGACDTFRAAAVEQLNVWAERISCPIVTGTIGADAASVAY 175
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGN 509
+ ++ A + DVV++DTAGR+ +++ LM L+K+ + P ++ V +A +G
Sbjct: 176 KTVERAVKEPFDVVIIDTAGRLHNHKNLMEELAKICRVIRRHDEKAPHDIILVLDATIGQ 235
Query: 510 DAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCG 569
+ Q+ F+ D + G++LTK D K G L + + +G G
Sbjct: 236 NTFTQVEMFSS-FVD---------VGGLILTKLDGTA-KGGVVLRVSQKYNLMIHAIGTG 284
Query: 570 QSYTDLKKLNVKSIVKTLLK 589
+ DL+ + + K+LL+
Sbjct: 285 EGIEDLEDFSATNFAKSLLE 304
>TIGR_CMR|NSE_0545 [details] [associations]
symbol:NSE_0545 "signal recognition particle-docking
protein FtsY" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0006184 GO:GO:0017111 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_506428.1
ProteinModelPortal:Q2GDL8 STRING:Q2GDL8 GeneID:3931766
KEGG:nse:NSE_0545 PATRIC:22681139 OMA:RIISQNQ
BioCyc:NSEN222891:GHFU-564-MONOMER Uniprot:Q2GDL8
Length = 309
Score = 234 (87.4 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 328 ANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAK---EQRKPY 384
A++ E +K +K ++ K+ ++E+ V+ +T R + + D + K Q P
Sbjct: 48 ADIGPTVTERIIKTVK-KIKVKDGESLEQ--VKSIT-REEMKKVLDPTSKKLIFPQTGPQ 103
Query: 385 XXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEK 444
K+T + K+AY +Q +VM+AACD FR+ A+EQLR A R F
Sbjct: 104 VIVFCGVNGNGKTTTIGKLAYKFIQENKTVMIAACDLFRAAAIEQLRFWAERASATFFSS 163
Query: 445 GYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLM-------RALSKLIYLNNPD 497
K+ + A +A+++A + DV++VDT+GR+ LM R LSKL+ + P+
Sbjct: 164 ETSKNASGTAYKALEKALEDKVDVLIVDTSGRLHTQNDLMEELKKICRVLSKLMP-SAPN 222
Query: 498 LVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFD-TIDDKVGAALSMV 556
V+ +A G +A++Q+ F + N + G+++TK D T V A++
Sbjct: 223 EVILALDASTGQNALNQVQVFKDAV-------N---LTGLVVTKLDGTSKGGVIVAIAER 272
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK 589
Y + + FVG G+ TDL++ + V LL+
Sbjct: 273 YPN-LGIYFVGTGEKITDLEEFSPSEFVDALLE 304
>SGD|S000006292 [details] [associations]
symbol:SRP54 "Signal recognition particle (SRP) subunit
(homolog of mammalian SRP54)" species:4932 "Saccharomyces
cerevisiae" [GO:0008312 "7S RNA binding" evidence=IEA;IDA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA;IMP] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=IC;ISA] [GO:0005525 "GTP binding"
evidence=IEA;ISA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005048 "signal sequence binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005096 "GTPase activator activity"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0045047
"protein targeting to ER" evidence=IPI] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA;IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 SGD:S000006292
GO:GO:0005525 GO:GO:0005096 GO:GO:0043547 GO:GO:0003924
GO:GO:0006184 EMBL:BK006949 EMBL:U51033 GO:GO:0005048 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824 OrthoDB:EOG4TMV9N
EMBL:X16908 EMBL:M55517 EMBL:X51614 PIR:S69073 RefSeq:NP_015413.1
ProteinModelPortal:P20424 SMR:P20424 DIP:DIP-2943N IntAct:P20424
MINT:MINT-484768 STRING:P20424 PaxDb:P20424 PeptideAtlas:P20424
EnsemblFungi:YPR088C GeneID:856203 KEGG:sce:YPR088C CYGD:YPR088c
OMA:TAGRHKE NextBio:981405 Genevestigator:P20424 GermOnline:YPR088C
Uniprot:P20424
Length = 541
Score = 253 (94.1 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 61/193 (31%), Positives = 106/193 (54%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T+ K+A + + V + DTFR+GA +QL+ +A R ++P + E DPA VA+
Sbjct: 122 KTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAE 181
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E I + + D+++VDT+GR E L + + ++ + P+ + V +A +G A +Q
Sbjct: 182 EGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQ-AAEQQ 240
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
SK ++ +D + I+LTK D + G A+S V + P++F+G G+ DL
Sbjct: 241 SKAFKESSDFGA---------IILTKMDG-HARGGGAISAVAATNTPIIFIGTGEHIHDL 290
Query: 576 KKLNVKSIVKTLL 588
+K + KS + LL
Sbjct: 291 EKFSPKSFISKLL 303
>POMBASE|SPCC188.06c [details] [associations]
symbol:srp54 "signal recognition particle subunit Srp54"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IMP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IMP] [GO:0008312 "7S RNA binding" evidence=IMP]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 PomBase:SPCC188.06c
GO:GO:0005525 GO:GO:0005783 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003924 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
OMA:GQQVVKI EMBL:X51613 EMBL:M55518 PIR:A33644 RefSeq:NP_588209.1
ProteinModelPortal:P21565 MINT:MINT-4687605 STRING:P21565
PRIDE:P21565 EnsemblFungi:SPCC188.06c.1 GeneID:2539290
KEGG:spo:SPCC188.06c OrthoDB:EOG4TMV9N NextBio:20800457
Uniprot:P21565
Length = 522
Score = 252 (93.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 60/193 (31%), Positives = 104/193 (53%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+A + + + A DTFR+GA +QL+ +A + +VP F E DP ++AK
Sbjct: 114 KTTTCSKLALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETDPVVIAK 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E + + + DV++VDT+GR Q + L + ++ PD + + +A +G A Q
Sbjct: 174 EGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQ- 232
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
SK ++ AD + +++TK D K G ALS V + P++F+G G+ DL
Sbjct: 233 SKAFKETADFGA---------VIITKLDG-HAKGGGALSAVAATKTPIVFIGTGEHINDL 282
Query: 576 KKLNVKSIVKTLL 588
++ + +S + LL
Sbjct: 283 ERFSPRSFISKLL 295
>UNIPROTKB|P0AGD7 [details] [associations]
symbol:ffh species:83333 "Escherichia coli K-12"
[GO:0048500 "signal recognition particle" evidence=IEA;IMP]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IMP;IDA] [GO:0006612
"protein targeting to membrane" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISS;IMP;IDA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA;IMP]
[GO:0003723 "RNA binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006612 GO:GO:0003924 GO:GO:0008312 PDB:2XXA PDBsum:2XXA
TCDB:3.A.5.1.1 GO:GO:0006614 SUPFAM:SSF47364 PDB:2XKV PDBsum:2XKV
EMBL:X01818 PDB:2J28 PDBsum:2J28 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI PIR:E65039
RefSeq:NP_417101.1 RefSeq:YP_490833.1 PDB:1DUL PDB:1HQ1 PDB:2PXB
PDB:2PXD PDB:2PXE PDB:2PXF PDB:2PXK PDB:2PXL PDB:2PXP PDB:2PXQ
PDB:2PXT PDB:2PXU PDB:2PXV PDB:3LQX PDBsum:1DUL PDBsum:1HQ1
PDBsum:2PXB PDBsum:2PXD PDBsum:2PXE PDBsum:2PXF PDBsum:2PXK
PDBsum:2PXL PDBsum:2PXP PDBsum:2PXQ PDBsum:2PXT PDBsum:2PXU
PDBsum:2PXV PDBsum:3LQX ProteinModelPortal:P0AGD7 SMR:P0AGD7
DIP:DIP-31865N IntAct:P0AGD7 MINT:MINT-1218614 PRIDE:P0AGD7
EnsemblBacteria:EBESCT00000004690 EnsemblBacteria:EBESCT00000014850
GeneID:12933092 GeneID:947102 KEGG:ecj:Y75_p2558 KEGG:eco:b2610
PATRIC:32120619 EchoBASE:EB0296 EcoGene:EG10300
ProtClustDB:PRK10867 BioCyc:EcoCyc:EG10300-MONOMER
BioCyc:ECOL316407:JW5414-MONOMER EvolutionaryTrace:P0AGD7
Genevestigator:P0AGD7 GO:GO:0048500 Uniprot:P0AGD7
Length = 453
Score = 250 (93.1 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 63/194 (32%), Positives = 106/194 (54%)
Query: 396 KSTNLAKVAYWLLQ-HKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T++ K+ +L + HK V++ + D +R A++QL T A ++ V F + P +
Sbjct: 113 KTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIV 172
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
A++EA DV+LVDTAGR+ +E +M + ++ NP LFV +A+ G DA +
Sbjct: 173 NAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANT 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
FN+ L P + G++LTK D D + GAALS+ +++G P+ F+G G+
Sbjct: 233 AKAFNEAL------P----LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEA 281
Query: 575 LKKLNVKSIVKTLL 588
L+ + I +L
Sbjct: 282 LEPFHPDRIASRIL 295
Score = 38 (18.4 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 199 ANGKENTSSNIGAFDVSKLQKLRNKGGKKTDTVVSKGS--NPDPKKKI 244
A G+EN + N+ A + + +G KT +V G KKK+
Sbjct: 85 AMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKV 132
>FB|FBgn0010747 [details] [associations]
symbol:Srp54k "Signal recognition particle protein 54k"
species:7227 "Drosophila melanogaster" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISS] [GO:0008312 "7S RNA binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0005048 "signal sequence binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0005048
GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 HSSP:P70722 EMBL:AY094660
ProteinModelPortal:Q8T3P8 SMR:Q8T3P8 STRING:Q8T3P8 PaxDb:Q8T3P8
PRIDE:Q8T3P8 FlyBase:FBgn0010747 InParanoid:Q8T3P8
OrthoDB:EOG44TMQ3 ChiTaRS:Srp54k ArrayExpress:Q8T3P8 Bgee:Q8T3P8
Uniprot:Q8T3P8
Length = 569
Score = 249 (92.7 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/193 (29%), Positives = 100/193 (51%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T K+AY + + DTFR+GA +Q++ +A + ++P + E DP ++A+
Sbjct: 114 KTTTCTKLAYHYQKRNWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQ 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
+ + R G ++++VDT+GR + E L + + +PD ++FV +A +G Q
Sbjct: 174 DGVDMFKREGFEMIIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D+ S +++TK D K G ALS V + +P++F+G G+ DL
Sbjct: 234 KAFKDKV-DIGS---------VIITKLDG-HAKGGGALSAVAATQSPIIFIGTGEHIDDL 282
Query: 576 KKLNVKSIVKTLL 588
+ K V LL
Sbjct: 283 EPFKTKPFVSKLL 295
>TIGR_CMR|APH_0349 [details] [associations]
symbol:APH_0349 "signal recognition particle protein"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_504956.1 ProteinModelPortal:Q2GKZ5 STRING:Q2GKZ5
GeneID:3930944 KEGG:aph:APH_0349 PATRIC:20949288
BioCyc:APHA212042:GHPM-378-MONOMER Uniprot:Q2GKZ5
Length = 449
Score = 236 (88.1 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 67/196 (34%), Positives = 105/196 (53%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV---PIFEKGYEKDPAI 452
K+TN KVA L + + ++A+ D +R A EQL+ A + + PI E E+ P
Sbjct: 113 KTTNTVKVALRLKKDSKNPLVASLDVYRPAAREQLKVLADGVGIDSLPIVE---EQKPLD 169
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
+AK A++EA G DVVL+DTAGR+ N+ ++ L + +P ++ V ++L+G DAV
Sbjct: 170 IAKRAMREARLKGHDVVLLDTAGRLHINQDMIDELKCVKKEVSPAEIVLVVDSLMGQDAV 229
Query: 513 DQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
+ KFN++L I G + T+ D D + GA LSM V+G P+ F+ G+
Sbjct: 230 TMVRKFNEELG----------ITGTIFTRADG-DPRGGAILSMKLVAGCPIKFMSTGEKP 278
Query: 573 TDLKKLNVKSIVKTLL 588
DL I + +L
Sbjct: 279 EDLDDFYPDRIARRML 294
Score = 50 (22.7 bits), Expect = 5.9e-18, Sum P(2) = 5.9e-18
Identities = 13/63 (20%), Positives = 30/63 (47%)
Query: 314 TGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTK--NVAAMEEALVRILTPRRSIDIL 371
T FSS Q ++GK + D + ++ + L+ N+ ++E + + + D++
Sbjct: 6 TKGFSSALQRLSGKREISSKDFDLVIEDITQALLDADVNLGVVDEFIENVKSKIVGGDVV 65
Query: 372 RDV 374
+ V
Sbjct: 66 KGV 68
>TIGR_CMR|VC_0560 [details] [associations]
symbol:VC_0560 "signal recognition particle protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR004780
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 PIR:H82306 RefSeq:NP_230211.1
HSSP:P07019 ProteinModelPortal:Q9KUG1 SMR:Q9KUG1 DNASU:2615237
GeneID:2615237 KEGG:vch:VC0560 PATRIC:20080238 Uniprot:Q9KUG1
Length = 461
Score = 244 (91.0 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 64/194 (32%), Positives = 102/194 (52%)
Query: 396 KSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T++ K++ L + K V++ + D +R A++QL T A L V F ++ P +A
Sbjct: 113 KTTSVGKLSKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIA 172
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
AI A + DV++VDTAGR+ +E +M + L NP LFV +A+ G DA D
Sbjct: 173 NAAIDHAKKKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAADT 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
F L P + G++LTK D D + GAALS+ +++G P+ F+G G+
Sbjct: 233 AKAFGDAL------P----LTGVILTKVDG-DARGGAALSVRHITGKPIKFIGVGEKTDA 281
Query: 575 LKKLNVKSIVKTLL 588
L+ + I +L
Sbjct: 282 LEPFHPDRIASRIL 295
>TIGR_CMR|SPO_1339 [details] [associations]
symbol:SPO_1339 "signal recognition particle-docking
protein FtsY" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] [GO:0048501 "signal recognition particle, plasma
membrane targeting" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003924 GO:GO:0031226 HOGENOM:HOG000036278 KO:K03110
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 OMA:ADMGVET
RefSeq:YP_166581.1 ProteinModelPortal:Q5LTS4 SMR:Q5LTS4
GeneID:3192959 KEGG:sil:SPO1339 PATRIC:23375989 Uniprot:Q5LTS4
Length = 390
Score = 241 (89.9 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 345 RLMTKNVAAM-EEALVRILTPRRSIDILRDVHAAKEQRKPYXXXXXXXXXXXKSTNLAKV 403
+L T+ + A+ + + RI+ P + R + ++P K+T + K+
Sbjct: 153 KLSTQEIKALLAQEITRIMEP-----VARPMPLYP--KRPQVVLVVGVNGSGKTTTIGKL 205
Query: 404 AYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATR 463
A V++AA DTFR+ AVEQL+ R VP+ DPA +A +A+ A
Sbjct: 206 ASQFKAAGKKVVIAAGDTFRAAAVEQLQVWGDRAGVPVLTAPEGSDPASLAFDAMTRAQE 265
Query: 464 NGSDVVLVDTAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSK 517
+G+D++L+DTAGR+Q+ LM L+K++ + P L V +A G +A+ Q+
Sbjct: 266 DGADLLLIDTAGRLQNRADLMEELAKIVRVIRKKDDTAPHNTLLVLDATTGQNAISQVET 325
Query: 518 FNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKK 577
F QKLAD+S G+++TK D K G +S+ G P+ +G G+ DL
Sbjct: 326 F-QKLADVS---------GLVMTKLDGTA-KGGILVSLADRFGLPIHAIGVGEQIDDLAP 374
Query: 578 LNVKSIVKTL 587
+ + L
Sbjct: 375 FDPEDFAAAL 384
>TIGR_CMR|ECH_0475 [details] [associations]
symbol:ECH_0475 "signal recognition particle protein"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005048 "signal sequence
binding" evidence=ISS] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
[GO:0048501 "signal recognition particle, plasma membrane
targeting" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
TIGRFAMs:TIGR00959 OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500
RefSeq:YP_507291.1 ProteinModelPortal:Q2GGZ2 STRING:Q2GGZ2
GeneID:3927281 KEGG:ech:ECH_0475 PATRIC:20576422
BioCyc:ECHA205920:GJNR-477-MONOMER Uniprot:Q2GGZ2
Length = 448
Score = 240 (89.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 63/196 (32%), Positives = 103/196 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQV---PIFEKGYEKDPAI 452
K+T AK+A L K V+MA+ D +R A +QL +++ V PI E + P
Sbjct: 112 KTTTTAKLALKLKNKKKEVVMASLDVYRPAAQKQLEILGKQIDVQTLPIIEN---QAPID 168
Query: 453 VAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAV 512
+ K A+ A + DV+++DTAGR+ ++ +M L + L +P V+ V ++++G DA+
Sbjct: 169 IVKRAMDNAQQANCDVLILDTAGRLHVDQVMMEELRAIKDLTSPSEVILVVDSMIGQDAI 228
Query: 513 DQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
+ FN + I GI+LT+ D D + GAALSM G+P+ F+ G+
Sbjct: 229 NVAKSFNDNIG----------ITGIILTRIDG-DSRGGAALSMKMSVGSPIKFIANGEKL 277
Query: 573 TDLKKLNVKSIVKTLL 588
+DL + I K +L
Sbjct: 278 SDLDDFYPERIAKRIL 293
Score = 41 (19.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 352 AAMEEALVRILTPRRSIDILRD-VHAAKEQ 380
AAMEE V +L S+ +++D + KE+
Sbjct: 29 AAMEEVKVALLEADVSLAVVKDFISNVKEK 58
>UNIPROTKB|G3V4F7 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 Pfam:PF00448 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0048500 EMBL:AL049776
HGNC:HGNC:11301 ChiTaRS:SRP54 ProteinModelPortal:G3V4F7 SMR:G3V4F7
Ensembl:ENST00000555557 ArrayExpress:G3V4F7 Bgee:G3V4F7
Uniprot:G3V4F7
Length = 440
Score = 240 (89.5 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 50 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 109
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 110 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 169
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 170 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 218
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 219 EPFKTQPFISKLL 231
>UNIPROTKB|Q2T9U1 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9913 "Bos taurus" [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0008312 "7S RNA binding" evidence=ISS] [GO:0019003 "GDP
binding" evidence=ISS] [GO:0030942 "endoplasmic reticulum signal
peptide binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0043021 "ribonucleoprotein complex
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 EMBL:BC111270
IPI:IPI00698247 RefSeq:NP_001033290.1 UniGene:Bt.36654 HSSP:Q6MTB9
ProteinModelPortal:Q2T9U1 SMR:Q2T9U1 STRING:Q2T9U1 PRIDE:Q2T9U1
Ensembl:ENSBTAT00000025405 GeneID:614017 KEGG:bta:614017 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 InParanoid:Q2T9U1
OMA:GQQVVKI OrthoDB:EOG45MN54 NextBio:20898897 Uniprot:Q2T9U1
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|P61010 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=ISS;IMP] [GO:0042493 "response to drug"
evidence=ISS] [GO:0045047 "protein targeting to ER"
evidence=ISS;IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0008144 "drug binding"
evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISS] [GO:0006616 "SRP-dependent
cotranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=IMP]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] Reactome:REACT_86357
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005829 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
SUPFAM:SSF47364 GO:GO:0006616 GO:GO:0005786 GO:GO:0006617
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 Reactome:REACT_146484
GO:GO:0030942 PDB:2J37 PDBsum:2J37 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 EMBL:X16318 PIR:S05197 RefSeq:NP_001003272.1
UniGene:Cfa.3810 PDB:2GO5 PDBsum:2GO5 ProteinModelPortal:P61010
SMR:P61010 STRING:P61010 PRIDE:P61010 Ensembl:ENSCAFT00000021158
GeneID:403953 KEGG:cfa:403953 InParanoid:P61010
EvolutionaryTrace:P61010 NextBio:20817443 Uniprot:P61010
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|P61011 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0008144 "drug
binding" evidence=IDA] [GO:0006617 "SRP-dependent cotranslational
protein targeting to membrane, signal sequence recognition"
evidence=ISS] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IDA] [GO:0008312 "7S RNA binding" evidence=IDA]
[GO:0006616 "SRP-dependent cotranslational protein targeting to
membrane, translocation" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IDA]
[GO:0042493 "response to drug" evidence=IDA] [GO:0045047 "protein
targeting to ER" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IC;TAS] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_17015 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005829 GO:GO:0005730
GO:GO:0042493 GO:GO:0006412 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0043021 GO:GO:0019003
TCDB:3.A.5.9.1 GO:GO:0008312 SUPFAM:SSF47364 GO:GO:0006616
GO:GO:0005786 GO:GO:0006617 eggNOG:COG0541 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0030942 PDB:1MFQ PDBsum:1MFQ CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI OrthoDB:EOG45MN54 EMBL:X86373 EMBL:U51920 EMBL:AK300824
EMBL:AK312853 EMBL:AL049776 EMBL:BC000652 EMBL:BC003389
IPI:IPI00009822 IPI:IPI00929464 PIR:S54143 RefSeq:NP_001139754.1
RefSeq:NP_003127.1 UniGene:Hs.167535 PDB:1QB2 PDBsum:1QB2
ProteinModelPortal:P61011 SMR:P61011 IntAct:P61011 STRING:P61011
PhosphoSite:P61011 DMDM:46577650 PaxDb:P61011 PRIDE:P61011
DNASU:6729 Ensembl:ENST00000216774 Ensembl:ENST00000546080
Ensembl:ENST00000556994 GeneID:6729 KEGG:hsa:6729 UCSC:uc001wso.3
GeneCards:GC14P035452 HGNC:HGNC:11301 HPA:HPA048977 MIM:604857
neXtProt:NX_P61011 PharmGKB:PA36125 InParanoid:P61011
PhylomeDB:P61011 ChiTaRS:SRP54 EvolutionaryTrace:P61011
GenomeRNAi:6729 NextBio:26248 ArrayExpress:P61011 Bgee:P61011
CleanEx:HS_SRP54 Genevestigator:P61011 GermOnline:ENSG00000100883
Uniprot:P61011
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|F2Z5M9 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008144
"drug binding" evidence=IEA] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005634 GO:GO:0042493 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:CU469145
RefSeq:XP_001927834.3 ProteinModelPortal:F2Z5M9 SMR:F2Z5M9
PRIDE:F2Z5M9 Ensembl:ENSSSCT00000002187 GeneID:100154361
KEGG:ssc:100154361 Uniprot:F2Z5M9
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|Q4R965 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9541 "Macaca fascicularis" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0008144 "drug binding" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030942 "endoplasmic reticulum signal peptide binding"
evidence=ISS] [GO:0042493 "response to drug" evidence=ISS]
[GO:0045047 "protein targeting to ER" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 GO:GO:0005525 GO:GO:0005634 GO:GO:0042493
GO:GO:0016607 GO:GO:0008144 GO:GO:0003924 GO:GO:0006184
GO:GO:0019003 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0045047 GO:GO:0005786 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 HOVERGEN:HBG061072 EMBL:AB168231
ProteinModelPortal:Q4R965 SMR:Q4R965 PRIDE:Q4R965 Uniprot:Q4R965
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|Q5R4R6 [details] [associations]
symbol:SRP54 "Signal recognition particle 54 kDa protein"
species:9601 "Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005786 "signal recognition
particle, endoplasmic reticulum targeting" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=ISS] [GO:0008144 "drug
binding" evidence=ISS] [GO:0008312 "7S RNA binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] [GO:0030942 "endoplasmic
reticulum signal peptide binding" evidence=ISS] [GO:0042493
"response to drug" evidence=ISS] [GO:0045047 "protein targeting to
ER" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0006184 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0045047 GO:GO:0005786 KO:K03106
Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942
CTD:6729 HOVERGEN:HBG061072 EMBL:CR861178 RefSeq:NP_001126912.1
UniGene:Pab.3814 ProteinModelPortal:Q5R4R6 SMR:Q5R4R6 PRIDE:Q5R4R6
GeneID:100173929 KEGG:pon:100173929 InParanoid:Q5R4R6
Uniprot:Q5R4R6
Length = 504
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>TIGR_CMR|VC_0147 [details] [associations]
symbol:VC_0147 "signal recognition particle-docking protein
FtsY" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0051301 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0031226 KO:K03110
ProtClustDB:PRK10416 GO:GO:0006614 SUPFAM:SSF47364
TIGRFAMs:TIGR00064 OMA:VEAVAIQ HSSP:P10121 PIR:B82360
RefSeq:NP_229805.1 ProteinModelPortal:Q9KVJ6 SMR:Q9KVJ6
DNASU:2614855 GeneID:2614855 KEGG:vch:VC0147 PATRIC:20079332
Uniprot:Q9KVJ6
Length = 391
Score = 235 (87.8 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 74/241 (30%), Positives = 113/241 (46%)
Query: 356 EALVRILTPRRSIDILRDVH---AAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKV 412
EAL +L + +IL V ++KPY K+T + K+A
Sbjct: 158 EALYGLLKEEMA-EILSQVEQPLVIDTEKKPYVILMVGVNGVGKTTTIGKLAKQFQAQGK 216
Query: 413 SVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVD 472
VM+AA DTFR+ AVEQL+ R QVP+ + D A V +AI+ A G DVV+ D
Sbjct: 217 KVMLAAGDTFRAAAVEQLQVWGERNQVPVIAQHTGADSASVIYDAIEAAKARGIDVVIAD 276
Query: 473 TAGRMQDNEPLMRALSKLIYL------NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLS 526
TAGR+Q+ LM L K++ + + P ++ +A G +A+ Q F+ D++
Sbjct: 277 TAGRLQNKSNLMEELRKIVRVMKKIDDSAPHEIMLTLDAGTGQNAISQAKLFS----DVA 332
Query: 527 SSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKT 586
P I GI LTK D K G ++ P+ ++G G+ DL+ + +
Sbjct: 333 ----P--ITGITLTKLDGTA-KGGVIFAIADQFQIPIRYIGVGEKIDDLRPFATQEFIDA 385
Query: 587 L 587
L
Sbjct: 386 L 386
>RGD|2323636 [details] [associations]
symbol:Fam177a1 "family with sequence similarity 177, member A1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:2323636 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GeneTree:ENSGT00550000074824
IPI:IPI00387699 PRIDE:F1M7P5 Ensembl:ENSRNOT00000052076
ArrayExpress:F1M7P5 Uniprot:F1M7P5
Length = 500
Score = 238 (88.8 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>RGD|621390 [details] [associations]
symbol:Srp54 "signal recognition particle 54A" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003924 "GTPase activity" evidence=IEA;ISO] [GO:0005525 "GTP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA;ISO] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008312 "7S RNA binding" evidence=IEA;ISO]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA;ISO] [GO:0030942 "endoplasmic reticulum signal peptide
binding" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEA;ISO] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA;ISO] [GO:0045047 "protein targeting to ER"
evidence=ISO] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
RGD:621390 GO:GO:0005525 GO:GO:0042493 GO:GO:0016607 GO:GO:0008144
GO:GO:0003924 GO:GO:0043021 GO:GO:0019003 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786 eggNOG:COG0541
HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729 HOVERGEN:HBG061072
OMA:GQQVVKI EMBL:BC079117 IPI:IPI00391089 RefSeq:NP_446323.1
UniGene:Rn.24880 ProteinModelPortal:Q6AYB5 SMR:Q6AYB5 STRING:Q6AYB5
PRIDE:Q6AYB5 Ensembl:ENSRNOT00000049937 GeneID:116650
KEGG:rno:116650 UCSC:RGD:621390 InParanoid:Q6AYB5 NextBio:619403
ArrayExpress:Q6AYB5 Genevestigator:Q6AYB5
GermOnline:ENSRNOG00000032776 Uniprot:Q6AYB5
Length = 504
Score = 238 (88.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>ZFIN|ZDB-GENE-040426-818 [details] [associations]
symbol:srp54 "signal recognition particle 54"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004125 InterPro:IPR006325
InterPro:IPR013822 InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 PROSITE:PS00300 SMART:SM00382 SMART:SM00962
SMART:SM00963 ZFIN:ZDB-GENE-040426-818 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 CTD:6729
GeneTree:ENSGT00550000074824 HOVERGEN:HBG061072 OMA:GQQVVKI
OrthoDB:EOG45MN54 GO:GO:0048500 HSSP:P70722 EMBL:BX088587
EMBL:BC045474 EMBL:BC067588 IPI:IPI00483938 RefSeq:NP_957282.1
UniGene:Dr.7990 SMR:Q7ZVN5 STRING:Q7ZVN5 Ensembl:ENSDART00000018678
Ensembl:ENSDART00000133424 GeneID:393963 KEGG:dre:393963
InParanoid:Q7ZVN5 NextBio:20814934 Uniprot:Q7ZVN5
Length = 504
Score = 238 (88.8 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 53/193 (27%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DTFR+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAA 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKSENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>UNIPROTKB|P10121 [details] [associations]
symbol:ftsY "SRP receptor" species:83333 "Escherichia coli
K-12" [GO:0006184 "GTP catabolic process" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031226 "intrinsic to
plasma membrane" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA;IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005829 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 GO:GO:0031226 EMBL:X04398
PIR:S03130 RefSeq:NP_417921.1 RefSeq:YP_491970.1 PDB:1FTS PDB:2QY9
PDB:2XXA PDB:2YHS PDBsum:1FTS PDBsum:2QY9 PDBsum:2XXA PDBsum:2YHS
ProteinModelPortal:P10121 SMR:P10121 DIP:DIP-9709N IntAct:P10121
MINT:MINT-1247716 TCDB:3.A.5.1.1 PRIDE:P10121
EnsemblBacteria:EBESCT00000004496 EnsemblBacteria:EBESCT00000016891
GeneID:12933505 GeneID:947978 KEGG:ecj:Y75_p3714 KEGG:eco:b3464
PATRIC:32122372 EchoBASE:EB0342 EcoGene:EG10346 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 OMA:AETNAEY ProtClustDB:PRK10416
BioCyc:EcoCyc:EG10346-MONOMER BioCyc:ECOL316407:JW3429-MONOMER
EvolutionaryTrace:P10121 Genevestigator:P10121 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 Uniprot:P10121
Length = 497
Score = 236 (88.1 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 66/215 (30%), Positives = 101/215 (46%)
Query: 379 EQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQ 438
E + P+ K+T + K+A Q SVM+AA DTFR+ AVEQL+ +R
Sbjct: 289 EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNN 348
Query: 439 VPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN--- 495
+P+ + D A V +AIQ A DV++ DTAGR+Q+ LM L K++ +
Sbjct: 349 IPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLD 408
Query: 496 ---PDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAA 552
P V+ +A G +AV Q F++ + + GI LTK D K G
Sbjct: 409 VEAPHEVMLTIDASTGQNAVSQAKLFHEAVG----------LTGITLTKLDGTA-KGGVI 457
Query: 553 LSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
S+ G P+ ++G G+ DL+ ++ L
Sbjct: 458 FSVADQFGIPIRYIGVGERIEDLRPFKADDFIEAL 492
>TIGR_CMR|ECH_1111 [details] [associations]
symbol:ECH_1111 "signal recognition particle-docking
protein FtsY" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006184 GO:GO:0017111
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416
GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_507895.1
ProteinModelPortal:Q2GF88 STRING:Q2GF88 GeneID:3927733
KEGG:ech:ECH_1111 PATRIC:20577558 OMA:ADMGVET
BioCyc:ECHA205920:GJNR-1114-MONOMER Uniprot:Q2GF88
Length = 310
Score = 223 (83.6 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 70/254 (27%), Positives = 120/254 (47%)
Query: 342 LKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKE-QRKPYXXXXXXXXXXXKSTNL 400
L +L + M++ V+ +IL V KP+ K+T +
Sbjct: 63 LTQKLASTKFNEMDDNTVKQKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTTTI 122
Query: 401 AKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQE 460
K+A+ V++AACDTFR+ A EQL ++++ P+ D A +A +A+Q+
Sbjct: 123 GKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVNFPVVTGNQGADAASIAYQAMQQ 182
Query: 461 ATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL-----NN-PDLVLFVGEALVGNDAVDQ 514
A +DV+L+DTAGR+ +++ LM L+K+ + NN P V+ + +A G +AV+Q
Sbjct: 183 ALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAVNQ 242
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
+ F Q + N I G+++TK D K G + + + +G G+S
Sbjct: 243 VDAFLQFV-------N---ISGLIITKLDGTA-KGGVVIRIAQKYKLNIHAIGIGESVEQ 291
Query: 575 LKKLNVKSIVKTLL 588
L+ + K LL
Sbjct: 292 LQDFSAKEFAAGLL 305
>UNIPROTKB|Q97QH0 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 HSSP:P83749 PIR:D95144
RefSeq:NP_345709.1 ProteinModelPortal:Q97QH0
EnsemblBacteria:EBSTRT00000026851 GeneID:931757 KEGG:spn:SP_1244
PATRIC:19706881 OMA:DEGKSVI Uniprot:Q97QH0
Length = 429
Score = 234 (87.4 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 66/201 (32%), Positives = 106/201 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEK-DPAIVA 454
K+T++ K+A+ Q VM+ A DTFR+GAV QL RR+ VP+ G EK DPA V
Sbjct: 238 KTTSIGKLAHRYKQAGKKVMLVAADTFRAGAVAQLAEWGRRVDVPVVT-GPEKADPASVV 296
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKL------IYLNNPDLVLFVGEALVG 508
+ ++ A G D++++DTAGR+Q+ + LM L K+ + P +A G
Sbjct: 297 FDGMERAVTEGIDILMIDTAGRLQNKDNLMAELEKIGRIIKRVVPEAPHETFLALDASTG 356
Query: 509 NDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGC 568
+A+ Q +F+ K+ L+ GI+LTK D + G L++ PV +G
Sbjct: 357 QNALVQAKEFS-KITPLT---------GIVLTKIDGTA-RGGVVLAIREELNIPVKLIGF 405
Query: 569 GQSYTDLKKLNVKSIVKTLLK 589
G+ D+ + N ++ +K LL+
Sbjct: 406 GEKIDDIGEFNSENFMKGLLE 426
>UNIPROTKB|E1C6G6 [details] [associations]
symbol:SRP54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0030942
"endoplasmic reticulum signal peptide binding" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005634 GO:GO:0042493 GO:GO:0008144 GO:GO:0003924
GO:GO:0043021 GO:GO:0019003 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 TIGRFAMs:TIGR01425 GO:GO:0030942 CTD:6729
GeneTree:ENSGT00550000074824 OMA:GQQVVKI EMBL:AADN02003392
IPI:IPI00581279 RefSeq:XP_421238.1 ProteinModelPortal:E1C6G6
PRIDE:E1C6G6 Ensembl:ENSGALT00000016327 GeneID:423322
KEGG:gga:423322 NextBio:20825811 Uniprot:E1C6G6
Length = 504
Score = 236 (88.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 52/193 (26%), Positives = 101/193 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T +K+AY+ + + DT+R+GA +QL+ +A + ++P + E DP I+A
Sbjct: 114 KTTTCSKLAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAS 173
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +++ ++++VDT+GR + + L + ++ PD +++V +A +G Q
Sbjct: 174 EGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQA 233
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F K+ D++S +++TK D K G ALS V + +P++F+G G+ D
Sbjct: 234 KAFKDKV-DVAS---------VIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHIDDF 282
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 283 EPFKTQPFISKLL 295
>GENEDB_PFALCIPARUM|PF14_0477 [details] [associations]
symbol:PF14_0477 "signal recognition particle
54 kDa protein, putative" species:5833 "Plasmodium falciparum"
[GO:0005048 "signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 235 (87.8 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 58/194 (29%), Positives = 101/194 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T K A++ + + DTFR+GA +QL+ +A ++++P + E DP +A
Sbjct: 114 KTTTCTKYAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIAT 173
Query: 456 EAIQEATRNGSDVVLVDTAGR-MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
+ + ++ D+++VD++GR Q+NE L + ++ P+ ++FV ++ +G DQ
Sbjct: 174 DGVNAFLKDKYDLIIVDSSGRHKQENE-LFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQ 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
F ++ L S I++TK D K G ALS V +G P+ F+G G+ D
Sbjct: 233 AMAFKNSVS-LGS---------IIITKIDG-HAKGGGALSAVAATGCPITFIGTGEHVND 281
Query: 575 LKKLNVKSIVKTLL 588
+K KS V LL
Sbjct: 282 FEKFEAKSFVSRLL 295
>UNIPROTKB|Q8IKX4 [details] [associations]
symbol:PF14_0477 "Signal recognition particle SRP54,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005048
"signal sequence binding" evidence=ISS] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0003924 GO:GO:0006184 EMBL:AE014187 GO:GO:0005048
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 HOGENOM:HOG000036165
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 TIGRFAMs:TIGR01425
GO:GO:0048500 HSSP:P70722 RefSeq:XP_001348651.1
ProteinModelPortal:Q8IKX4 EnsemblProtists:PF14_0477:mRNA
GeneID:812059 KEGG:pfa:PF14_0477 EuPathDB:PlasmoDB:PF3D7_1450100
OMA:QMANALP ProtClustDB:CLSZ2514463 Uniprot:Q8IKX4
Length = 500
Score = 235 (87.8 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 58/194 (29%), Positives = 101/194 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T K A++ + + DTFR+GA +QL+ +A ++++P + E DP +A
Sbjct: 114 KTTTCTKYAHYYQKKGFKTALVCADTFRAGAFDQLKQNAAKVKIPFYGSYSEVDPVKIAT 173
Query: 456 EAIQEATRNGSDVVLVDTAGR-MQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
+ + ++ D+++VD++GR Q+NE L + ++ P+ ++FV ++ +G DQ
Sbjct: 174 DGVNAFLKDKYDLIIVDSSGRHKQENE-LFEEMIQVENSIQPEEIIFVIDSHIGQSCHDQ 232
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
F ++ L S I++TK D K G ALS V +G P+ F+G G+ D
Sbjct: 233 AMAFKNSVS-LGS---------IIITKIDG-HAKGGGALSAVAATGCPITFIGTGEHVND 281
Query: 575 LKKLNVKSIVKTLL 588
+K KS V LL
Sbjct: 282 FEKFEAKSFVSRLL 295
>UNIPROTKB|P83749 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0006184
GO:GO:0017111 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
EMBL:AY484668 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2IYL PDB:2J7P PDB:2Q9A
PDB:2Q9B PDB:2Q9C PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW
PDBsum:2IYL PDBsum:2J7P PDBsum:2Q9A PDBsum:2Q9B PDBsum:2Q9C
PDBsum:2XKV ProteinModelPortal:P83749 SMR:P83749 IntAct:P83749
EvolutionaryTrace:P83749 Uniprot:P83749
Length = 304
Score = 220 (82.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 70/248 (28%), Positives = 116/248 (46%)
Query: 353 AMEEALVRILTPRRSIDILRDVHAAKEQRKPYX-----XXXXXXXXXXKSTNLAKVAYWL 407
A++E LV +L P LR + ++ KP K+T +AK+ +
Sbjct: 67 AVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYY 126
Query: 408 LQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSD 467
VM A DTFR+ QL +RL +P+ + DPA +A +A+Q G D
Sbjct: 127 QNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYD 186
Query: 468 VVLVDTAGRMQDNEPLMRALSKL---IYLNNPDL---VLFVGEALVGNDAVDQLSKFNQK 521
++ VDTAGR+ LM L K+ I +P+ V V +A+ G + ++Q KF++
Sbjct: 187 LLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEA 246
Query: 522 LADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVK 581
+ + G+++TK D K G + +V P+ FVG G+ DL+ + +
Sbjct: 247 VG----------LTGVIVTKLDGTA-KGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPE 295
Query: 582 SIVKTLLK 589
+ V+ LL+
Sbjct: 296 AFVEALLE 303
>UNIPROTKB|O07347 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:271 "Thermus aquaticus" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 GO:GO:0008312
GO:GO:0006614 SUPFAM:SSF47364 PDB:1OKK PDB:1RJ9 PDB:2CNW PDB:2J7P
PDB:2XKV PDBsum:1OKK PDBsum:1RJ9 PDBsum:2CNW PDBsum:2J7P
PDBsum:2XKV PDB:1RY1 PDBsum:1RY1 GO:GO:0005786 Gene3D:1.10.260.30
SUPFAM:SSF47446 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
EMBL:U82109 PDB:1FFH PDB:1JPJ PDB:1JPN PDB:1LS1 PDB:1NG1 PDB:1O87
PDB:2C03 PDB:2C04 PDB:2FFH PDB:2IY3 PDB:2J45 PDB:2J46 PDB:2NG1
PDB:3NG1 PDBsum:1FFH PDBsum:1JPJ PDBsum:1JPN PDBsum:1LS1
PDBsum:1NG1 PDBsum:1O87 PDBsum:2C03 PDBsum:2C04 PDBsum:2FFH
PDBsum:2IY3 PDBsum:2J45 PDBsum:2J46 PDBsum:2NG1 PDBsum:3NG1
ProteinModelPortal:O07347 SMR:O07347 IntAct:O07347
EvolutionaryTrace:O07347 Uniprot:O07347
Length = 430
Score = 234 (87.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 60/175 (34%), Positives = 95/175 (54%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T AK+A + ++ A DT R A EQLR ++ VP+ E + P + +
Sbjct: 111 KTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRR 170
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
++A D++LVDTAGR+Q +EPLM L++L + PD VL V +A+ G +A+
Sbjct: 171 RVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVA 230
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
F++K+ + G++LTK D D + GAALS +V+G P+ F G +
Sbjct: 231 RAFDEKVG----------VTGLVLTKLDG-DARGGAALSARHVTGKPIYFAGVSE 274
Score = 38 (18.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 324 IAGKANLDKADLEPALKALKDRLMTKNV 351
+ G+ + + DL+ L+ ++ LM +V
Sbjct: 16 LRGRGRITEEDLKATLREIRRALMDADV 43
>TIGR_CMR|SPO_3246 [details] [associations]
symbol:SPO_3246 "signal recognition particle protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0005048 "signal sequence binding"
evidence=ISS] [GO:0006617 "SRP-dependent cotranslational protein
targeting to membrane, signal sequence recognition" evidence=ISS]
[GO:0009306 "protein secretion" evidence=ISS] [GO:0048501 "signal
recognition particle, plasma membrane targeting" evidence=ISS]
HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR004780 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364
GO:GO:0005786 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959
OMA:GQQVVKI ProtClustDB:PRK10867 RefSeq:YP_168449.1
ProteinModelPortal:Q5LNF9 GeneID:3195205 KEGG:sil:SPO3246
PATRIC:23379937 Uniprot:Q5LNF9
Length = 510
Score = 227 (85.0 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 76/258 (29%), Positives = 127/258 (49%)
Query: 339 LKALKDRL----MTKNVAAMEEALVRILTPRRSIDILR---DVHAAKEQRKPYXXXXXXX 391
+KA++D+ +TK+V ++ +V+I+ +D+LR D K P
Sbjct: 52 VKAVQDKATGQAVTKSVTPGQQ-VVKIVHDTL-VDVLRGAEDPGKLKIDNPPAPILMVGL 109
Query: 392 XXXXKSTNLAKVAYWLLQHK-VSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDP 450
K+T AK+A L + + V+MA+ D +R A++QL ++ V + P
Sbjct: 110 QGGGKTTTTAKLAKRLKEREGKKVLMASLDVYRPAAMDQLAVLGAQIGVDTLPIVPGQKP 169
Query: 451 AIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
+AK A Q+A G DV ++DTAGR+ ++ LM+ + + + P L V + L G
Sbjct: 170 VDIAKRAKQQAMMGGYDVYMLDTAGRLHIDQVLMQEVEDVRNVVTPRETLLVVDGLTGQV 229
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
AV+ +F+ K+ I G++LT+ D D + GAALSM V+G P+ FVG G+
Sbjct: 230 AVEVAEEFDAKIG----------ISGVVLTRMDG-DGRGGAALSMRAVTGKPIRFVGLGE 278
Query: 571 SYTDLKKLNVKSIVKTLL 588
L+ + I +L
Sbjct: 279 KMDALETFEPERIAGRIL 296
>UNIPROTKB|P66842 [details] [associations]
symbol:ftsY "Signal recognition particle receptor FtsY"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005886 GO:GO:0005737 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006184 EMBL:BX842581 GO:GO:0017111 eggNOG:COG0552
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 PIR:A70748 RefSeq:NP_217437.1
RefSeq:NP_337502.1 RefSeq:YP_006516374.1 ProteinModelPortal:P66842
SMR:P66842 TCDB:3.A.5.2.2 PhosSite:P12071727 PRIDE:P66842
EnsemblBacteria:EBMYCT00000000121 EnsemblBacteria:EBMYCT00000072194
GeneID:13317714 GeneID:887205 GeneID:925285 KEGG:mtc:MT2989
KEGG:mtu:Rv2921c KEGG:mtv:RVBD_2921c PATRIC:18128342
TubercuList:Rv2921c OMA:FIGIGEN Uniprot:P66842
Length = 422
Score = 224 (83.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 84/272 (30%), Positives = 122/272 (44%)
Query: 333 ADLEPALKA-----LKDRLMTKNV-------AAMEEALVRILTPRRSIDILRDVHAAKEQ 380
ADL PA A L+ RL + NV A + + L+ L P +D R + A
Sbjct: 165 ADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQP--GMD--RSIRALPHA 220
Query: 381 RKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVP 440
P K+T + K+A L+ V++ A DTFR+ A +QL+T A R+
Sbjct: 221 GHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAA 280
Query: 441 IFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL----NNP 496
+ DPA VA +A+ + G+DVVL+DTAGR+ LM L K+ + +
Sbjct: 281 VVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASV 340
Query: 497 DLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMV 556
D VL V +A +G + + Q F + + D+S G +LTK D K G +
Sbjct: 341 DEVLLVLDATIGQNGLAQARVFAE-VVDIS---------GAVLTKLDGTA-KGGIVFRVQ 389
Query: 557 YVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
G PV VG G+ DL + V LL
Sbjct: 390 QELGVPVKLVGLGEGPDDLAPFEPAAFVDALL 421
>UNIPROTKB|P66844 [details] [associations]
symbol:ffh "Signal recognition particle protein"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00306
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00382 SMART:SM00962 SMART:SM00963 GO:GO:0005525
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003924
GO:GO:0006184 EMBL:BX842581 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 TCDB:3.A.5.2.2 GO:GO:0005786 eggNOG:COG0541
KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446 HOGENOM:HOG000036164
PANTHER:PTHR11564:SF7 TIGRFAMs:TIGR00959 OMA:GQQVVKI
ProtClustDB:PRK10867 PIR:D70747 RefSeq:NP_217432.1
RefSeq:NP_337496.1 RefSeq:YP_006516369.1 ProteinModelPortal:P66844
SMR:P66844 PRIDE:P66844 EnsemblBacteria:EBMYCT00000003158
EnsemblBacteria:EBMYCT00000069261 GeneID:13317709 GeneID:888242
GeneID:925291 KEGG:mtc:MT2984 KEGG:mtu:Rv2916c KEGG:mtv:RVBD_2916c
PATRIC:18128328 TubercuList:Rv2916c Uniprot:P66844
Length = 525
Score = 225 (84.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 67/187 (35%), Positives = 93/187 (49%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIF--------EKGYE 447
K+T K+A L + ++ ACD R AV QL+ R VP+F E G
Sbjct: 113 KTTLAGKLAARLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-P 171
Query: 448 KDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALV 507
DP VA + EA DVV+VDTAGR+ +E LM + + NPD VLFV +A++
Sbjct: 172 GDPVAVAAAGLAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMI 231
Query: 508 GNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVG 567
G DAV + F + + G+ LTK D D + GAALS+ V+G P++F
Sbjct: 232 GQDAVTTAAAFGEGVG----------FTGVALTKLDG-DARGGAALSVREVTGVPILFAS 280
Query: 568 CGQSYTD 574
G+ D
Sbjct: 281 TGEKLED 287
Score = 44 (20.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 13/64 (20%), Positives = 32/64 (50%)
Query: 318 SSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAA-MEEALV-RILTPRRSIDILRDVH 375
++ Q + GK L AD++ + ++ L+ +V+ + A + RI R ++ ++
Sbjct: 10 TAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALN 69
Query: 376 AAKE 379
A++
Sbjct: 70 PAQQ 73
>TAIR|locus:2157809 [details] [associations]
symbol:AT5G49500 "AT5G49500" species:3702 "Arabidopsis
thaliana" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005786 "signal recognition particle, endoplasmic reticulum
targeting" evidence=ISS] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0006617
"SRP-dependent cotranslational protein targeting to membrane,
signal sequence recognition" evidence=ISS] [GO:0008312 "7S RNA
binding" evidence=IEA;ISS] [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR000897 InterPro:IPR004125
InterPro:IPR006325 InterPro:IPR013822 InterPro:IPR022941
Pfam:PF00448 Pfam:PF02881 Pfam:PF02978 PROSITE:PS00300
SMART:SM00962 SMART:SM00963 GO:GO:0005525 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003924 GO:GO:0006184 EMBL:AB023033
GO:GO:0008312 GO:GO:0006614 SUPFAM:SSF47364 GO:GO:0005786
eggNOG:COG0541 HOGENOM:HOG000036165 KO:K03106
ProtClustDB:CLSN2686827 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 EMBL:U12126 IPI:IPI00534798 RefSeq:NP_199761.1
UniGene:At.29781 ProteinModelPortal:P49966 SMR:P49966 IntAct:P49966
STRING:P49966 PRIDE:P49966 GeneID:835010 KEGG:ath:AT5G49500
TAIR:At5g49500 InParanoid:P49966 Genevestigator:P49966
GermOnline:AT5G49500 Uniprot:P49966
Length = 497
Score = 223 (83.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 50/173 (28%), Positives = 88/173 (50%)
Query: 416 MAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAG 475
+ DTFR+GA +QL+ +A + ++P + DP +A E + + D+++VDT+G
Sbjct: 136 LVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSG 195
Query: 476 RMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLID 535
R + L + ++ PDLV+FV ++ +G A +Q F Q +A +
Sbjct: 196 RHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVA----------VG 245
Query: 536 GILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTLL 588
+++TK D K G LS V + +PV+F+G G+ + + + K V LL
Sbjct: 246 AVIITKMDG-HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLL 297
>TIGR_CMR|CPS_0157 [details] [associations]
symbol:CPS_0157 "signal recognition particle-docking
protein FtsY" species:167879 "Colwellia psychrerythraea 34H"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0031226
eggNOG:COG0552 HOGENOM:HOG000036278 KO:K03110 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:YP_266925.1
ProteinModelPortal:Q48AI8 SMR:Q48AI8 STRING:Q48AI8 GeneID:3519649
KEGG:cps:CPS_0157 PATRIC:21463731 OMA:VEAVAIQ
BioCyc:CPSY167879:GI48-260-MONOMER Uniprot:Q48AI8
Length = 481
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 69/279 (24%), Positives = 123/279 (44%)
Query: 320 MFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEA-----LVRILTPRRSIDILRDV 374
+F+ + L +E +K ++ + N +++A L++I + D+ + +
Sbjct: 212 LFEELETHLLLADVGVETTMKIIESLTQSANRKQLKDASALYDLLKIELKKVIEDVSQPL 271
Query: 375 HAAKEQRKPYXXXXXXXXXXXKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 434
E P+ K+T + K+A SVM+AA DTFR+ AVEQL+
Sbjct: 272 -VIPEDDGPFVILMVGVNGVGKTTTIGKLAKQFQAQGKSVMLAAGDTFRAAAVEQLQVWG 330
Query: 435 RRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL- 493
R +P+ + D A V +AI A D+++ DTAGR+Q+ LM L K++ +
Sbjct: 331 ERNNIPVIAQHTGADSASVIFDAISAAKARKVDIIIADTAGRLQNKAHLMEELKKVVRVM 390
Query: 494 -----NNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDK 548
N P V+ +A G +A+ Q F++ + + G+ +TK D K
Sbjct: 391 KKLDVNAPHEVMLTLDAGTGQNALSQTKLFDEAVG----------LTGLTITKLDGTA-K 439
Query: 549 VGAALSMVYVSGAPVMFVGCGQSYTDLKKLNVKSIVKTL 587
G ++ P+ ++G G+ DL+ N + L
Sbjct: 440 GGVIFAVADKHSIPIRYLGVGEGIDDLRPFNSDDFIDAL 478
>TIGR_CMR|SO_4586 [details] [associations]
symbol:SO_4586 "signal recognition particle-docking protein
FtsY" species:211586 "Shewanella oneidensis MR-1" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0005047 "signal recognition
particle binding" evidence=ISS] [GO:0009306 "protein secretion"
evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004390 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0005737 GO:GO:0003924 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0031226 HOGENOM:HOG000036278
KO:K03110 GO:GO:0006614 SUPFAM:SSF47364 TIGRFAMs:TIGR00064
HSSP:P10121 RefSeq:NP_720102.1 ProteinModelPortal:Q8E8S5 SMR:Q8E8S5
GeneID:1172171 KEGG:son:SO_4586 PATRIC:23528839 OMA:PDNANGP
Uniprot:Q8E8S5
Length = 510
Score = 213 (80.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 67/257 (26%), Positives = 117/257 (45%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTP--RRSIDILRDVHAAKEQRKPYXXXXXXXXXXXK 396
+K+L + K + E AL +L ++++D + + P+ K
Sbjct: 258 IKSLTEHASRKQLKDAE-ALYDLLRDEMQKTLDPVAIPLVPENANGPFVILMVGVNGVGK 316
Query: 397 STNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKE 456
+T + K+A + SVM+AA DTFR+ AVEQL+ +R +P+ + D A V +
Sbjct: 317 TTTIGKLAKQYQRQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVVAQHTGADSASVLFD 376
Query: 457 AIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN------PDLVLFVGEALVGND 510
A+Q A DV++ DTAGR+Q+ LM L K++ + P V+ +A G +
Sbjct: 377 ALQAAKARKIDVLIADTAGRLQNKSHLMEELKKVVRVMKKLDPEAPHEVMLTLDASTGQN 436
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
A+ Q F + + + G+ ++K D K G ++ P+ ++G G+
Sbjct: 437 AISQAQLFQEAVG----------VTGMTISKLDGTA-KGGVVFAIADKFKIPLRYIGVGE 485
Query: 571 SYTDLKKLNVKSIVKTL 587
DL+ N K + L
Sbjct: 486 QIDDLRTFNSKEFIDAL 502
>CGD|CAL0003314 [details] [associations]
symbol:SRP54 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005048
"signal sequence binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] HAMAP:MF_00306 InterPro:IPR000897 InterPro:IPR003593
InterPro:IPR004125 InterPro:IPR006325 InterPro:IPR013822
InterPro:IPR022941 Pfam:PF00448 Pfam:PF02881 Pfam:PF02978
PROSITE:PS00300 SMART:SM00382 SMART:SM00962 SMART:SM00963
CGD:CAL0003314 GO:GO:0005525 GO:GO:0003924 GO:GO:0006184
EMBL:AACQ01000049 EMBL:AACQ01000048 GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 KO:K03106 Gene3D:1.10.260.30 SUPFAM:SSF47446
TIGRFAMs:TIGR01425 GO:GO:0048500 RefSeq:XP_717868.1
RefSeq:XP_717934.1 ProteinModelPortal:Q5A885 STRING:Q5A885
GeneID:3640377 GeneID:3640507 KEGG:cal:CaO19.10753
KEGG:cal:CaO19.3243 Uniprot:Q5A885
Length = 556
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 55/193 (28%), Positives = 94/193 (48%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T+ K+A + + V + DTFR+GA +QL+ +A + +P + E DP +A
Sbjct: 131 KTTSCTKLAVYYKKRGFKVGLVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVKIAF 190
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQL 515
E +Q+ + D+++VDT+GR + E L + ++ P + V + +G A Q
Sbjct: 191 EGVQKFKQEKFDIIIVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQA 250
Query: 516 SKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTDL 575
F + S N I+LTK D K G A+S V + P++F+G G+ DL
Sbjct: 251 RAFKE-------SSN---FGSIILTKMDG-HAKGGGAISAVAATKTPIVFIGTGEHVGDL 299
Query: 576 KKLNVKSIVKTLL 588
+ + + LL
Sbjct: 300 EIFKPTTFISKLL 312
>TIGR_CMR|GSU_1132 [details] [associations]
symbol:GSU_1132 "signal recognition particle-docking
protein FtsY" species:243231 "Geobacter sulfurreducens PCA"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0005047 "signal
recognition particle binding" evidence=ISS] [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_00920 InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR004390 InterPro:IPR013822
Pfam:PF00448 Pfam:PF02881 PROSITE:PS00300 SMART:SM00382
SMART:SM00962 SMART:SM00963 GO:GO:0005525 GO:GO:0005737
GO:GO:0003924 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0031226
HOGENOM:HOG000036278 KO:K03110 ProtClustDB:PRK10416 GO:GO:0006614
SUPFAM:SSF47364 TIGRFAMs:TIGR00064 RefSeq:NP_952185.1
ProteinModelPortal:Q74E32 SMR:Q74E32 GeneID:2686843
KEGG:gsu:GSU1132 PATRIC:22025026 OMA:HLMAELE
BioCyc:GSUL243231:GH27-1142-MONOMER Uniprot:Q74E32
Length = 350
Score = 207 (77.9 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 70/258 (27%), Positives = 112/258 (43%)
Query: 339 LKALKDRLMTKNVAAMEEALVRILTPRRSIDILRDVHAAKEQ-RKPYXXXXXXXXXXXKS 397
++ L+ RL ++N EAL L + RD H P+ K+
Sbjct: 105 IRGLEQRL-SRNELKDGEALREALKEDIHGRLARDAHQLDVTGASPFVIMVIGVNGVGKT 163
Query: 398 TNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEA 457
T + K+A V++AA DTFR+ A EQL+ R V + DP+ V ++
Sbjct: 164 TTIGKLAARFTAQGKKVILAAGDTFRAAAAEQLQIWGERTGVDVIRHKEGADPSAVVFDS 223
Query: 458 IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNN------PDLVLFVGEALVGNDA 511
I+ A G+D+++VDTAGR+ LM L K+ + + P L V +A G +A
Sbjct: 224 IKAAVARGADILIVDTAGRLHTKVNLMEELKKVRRIMSREIPGAPHETLLVLDAATGQNA 283
Query: 512 VDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQS 571
+ Q F + + GI LTK D K G +++ PV ++G G+
Sbjct: 284 LSQAKLFKEAAQ----------VTGIALTKLDGTA-KGGIVVAICNEFRIPVRYIGVGEG 332
Query: 572 YTDLKKLNVKSIVKTLLK 589
DL+ + V+ L +
Sbjct: 333 IDDLRDFDPSQFVEALFQ 350
>TIGR_CMR|NSE_0540 [details] [associations]
symbol:NSE_0540 "signal recognition particle protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006617 "SRP-dependent
cotranslational protein targeting to membrane, signal sequence
recognition" evidence=ISS] [GO:0048501 "signal recognition
particle, plasma membrane targeting" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR004125
InterPro:IPR004780 InterPro:IPR013822 Pfam:PF00448 Pfam:PF02881
Pfam:PF02978 SMART:SM00382 SMART:SM00962 SMART:SM00963
GO:GO:0005525 GO:GO:0003924 GO:GO:0006184 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0008312 GO:GO:0006614
SUPFAM:SSF47364 eggNOG:COG0541 KO:K03106 Gene3D:1.10.260.30
SUPFAM:SSF47446 HOGENOM:HOG000036164 PANTHER:PTHR11564:SF7
OMA:GQQVVKI ProtClustDB:PRK10867 GO:GO:0048500 RefSeq:YP_506423.1
ProteinModelPortal:Q2GDM3 STRING:Q2GDM3 GeneID:3931977
KEGG:nse:NSE_0540 PATRIC:22681129
BioCyc:NSEN222891:GHFU-559-MONOMER Uniprot:Q2GDM3
Length = 449
Score = 181 (68.8 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 55/189 (29%), Positives = 101/189 (53%)
Query: 396 KSTNLAKVAYWLLQH-KVSVMMAACDTFRSGAVEQLRTHARRLQV---PIFEKGYEKDPA 451
K+T AK+A + + K ++++++ D +R A +QL A+++ V PI E G + D A
Sbjct: 113 KTTTAAKLALLIRKKFKKNILLSSVDIYRPAARKQLEILAKQIDVDTVPIVE-GEDVD-A 170
Query: 452 IVAKEA-IQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGND 510
IV K + + G DV++VDTAGR Q + LM L + P + V +A++G D
Sbjct: 171 IVKKTLDLFNNSHEGYDVLMVDTAGRSQIDSVLMEELKVIKNRLQPSEIFQVLDAMMGQD 230
Query: 511 AVDQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
+++ F+ ++ G+++++ D+ D +VG+ LS+ G P+ F G G+
Sbjct: 231 SLNVARTFHSEIGTT----------GVIVSRLDS-DARVGSVLSVRQSVGLPIRFCGAGE 279
Query: 571 SYTDLKKLN 579
DL++ +
Sbjct: 280 RVNDLEEFH 288
>UNIPROTKB|Q722L6 [details] [associations]
symbol:LMOf2365_0717 "Putative flagellar biosynthesis
protein FlhF" species:265669 "Listeria monocytogenes serotype 4b
str. F2365" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000897 InterPro:IPR020006 Pfam:PF00448 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
TIGRFAMs:TIGR03499 RefSeq:YP_013321.1 ProteinModelPortal:Q722L6
STRING:Q722L6 GeneID:2797398 KEGG:lmf:LMOf2365_0717 PATRIC:20322642
HOGENOM:HOG000254016 OMA:QFHGKKK ProtClustDB:PRK12726
Uniprot:Q722L6
Length = 407
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 57/180 (31%), Positives = 94/180 (52%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T L K+ + LL+ +V DTFRSGAVEQ + +A +L V + PA + +
Sbjct: 219 KTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELI---VATSPAEL-E 274
Query: 456 EAIQEATR-NGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQ 514
EA+Q T N D +L+DT GR E + +S + +PDL F + G + D
Sbjct: 275 EAVQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSS--GMKSADV 332
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD 574
++ KLA++ P IDG ++TK D ++G +++ + PV+++ GQ+ T+
Sbjct: 333 MTIL-PKLAEI-----P--IDGFIITKMDETT-RIGDLYTVMQETNLPVLYMTDGQNITE 383
>TIGR_CMR|CJE_0061 [details] [associations]
symbol:CJE_0061 "flagellar biosynthetic protein FlhF"
species:195099 "Campylobacter jejuni RM1221" [GO:0001539 "ciliary
or flagellar motility" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0017111 GO:GO:0043064 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
RefSeq:YP_178086.1 ProteinModelPortal:Q5HX99 STRING:Q5HX99
GeneID:3230824 KEGG:cjr:CJE0061 PATRIC:20041827 OMA:KVATNEY
BioCyc:CJEJ195099:GJC0-65-MONOMER Uniprot:Q5HX99
Length = 484
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 75/291 (25%), Positives = 131/291 (45%)
Query: 307 NKPDAKKTGWFSSMFQSIAGKANLDKADLEPALKALKDRLMTKNVAAMEEALVRILTPRR 366
+K +A+K F SI +A + LE L+A+ + AAM+ + R
Sbjct: 206 DKAEARKNLIIPPEFASIYKQAK-ESGMLENHLEAIMKATIENMPAAMKTN--KDAVQRY 262
Query: 367 SIDILRDVHAAKEQ---RKPYXXXXXXXXXXXKSTNLAKVA----YWLLQHKVSVMMAAC 419
+LR++ + + +K K+T LAK+A Y ++K ++
Sbjct: 263 FHSLLRNILPCRVESDIKKQKIMMLVGPTGVGKTTTLAKLAFRYAYGDKRYKTGII--TL 320
Query: 420 DTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAKEAIQEATRNGSDVVLVDTAGRMQD 479
DT+R GAVEQL +A+ +++PI + KD EAI+ N +V+LVDT G Q
Sbjct: 321 DTYRIGAVEQLFQYAKMMKLPIIDSIEPKD----LDEAIKSL--NNCEVILVDTIGNSQY 374
Query: 480 NEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSSSPNPQLIDGILL 539
++ + + + +N ++ V + N + L + + + L+ ID +++
Sbjct: 375 DQSKLAKTKEFLMHSNAEID--VNLVVSANTKQEDLMEIYKNFSFLN-------IDTLII 425
Query: 540 TKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYTD-LKKLNVKSIVKTLLK 589
TKFD G S+VY + P+ F GQ D L+ N +V +L+
Sbjct: 426 TKFDETK-VFGNIFSLVYETNIPLSFFSIGQEVPDDLEVANSDFLVHCILE 475
>TIGR_CMR|CHY_1010 [details] [associations]
symbol:CHY_1010 "flagellar biosynthesis protein FlhF"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0009426 "bacterial-type flagellum basal body, distal rod"
evidence=ISS] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 SMART:SM00962 GO:GO:0005525 GO:GO:0019861
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017111 GO:GO:0006614
eggNOG:COG1419 KO:K02404 RefSeq:YP_359857.1
ProteinModelPortal:Q3ADC7 STRING:Q3ADC7 GeneID:3728496
KEGG:chy:CHY_1010 PATRIC:21275153 HOGENOM:HOG000254735 OMA:IVESIRI
ProtClustDB:PRK05703 BioCyc:CHYD246194:GJCN-1009-MONOMER
Uniprot:Q3ADC7
Length = 350
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/182 (26%), Positives = 89/182 (48%)
Query: 396 KSTNLAKVAYWLLQHKVS-VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVA 454
K+T LAK+A L H+ + DTFR GAVEQL+ + + L + G P +
Sbjct: 169 KTTTLAKIAGRLAIHEEKPIRFITLDTFRVGAVEQLKIYGKYLGTTVKVAG---SPMELW 225
Query: 455 KEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYL--NNPDLVLFVGEALVGNDAV 512
+ A+Q+ +N + + +DTAGR + ++ L+ + D+ L + + DA
Sbjct: 226 R-AVQK--QNEGETIFIDTAGRPSKKQNQIQELAGFLEAVKKEKDIYLVISATVKPEDA- 281
Query: 513 DQLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSY 572
++++K D S P + ++TK D D K G ++++ P++++G GQ+
Sbjct: 282 EKIAK------DFS----PCGFNKFIVTKIDETD-KFGVLINLIVKFKKPIVYLGVGQNV 330
Query: 573 TD 574
D
Sbjct: 331 PD 332
>UNIPROTKB|Q81SE2 [details] [associations]
symbol:BA_1718 "Putative flagellar biosynthetic protein
FlhF" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 GO:GO:0005525 GO:GO:0019861 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0017111 GO:GO:0006614 KO:K02404
RefSeq:NP_844153.1 ProteinModelPortal:Q81SE2 DNASU:1086348
EnsemblBacteria:EBBACT00000010753 GeneID:1086348 KEGG:ban:BA_1718
PATRIC:18781034 HOGENOM:HOG000133114 ProtClustDB:PRK06731
Uniprot:Q81SE2
Length = 270
Score = 124 (48.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T LAK+A+ K +V D R G V+QL+ + + + FE +D A + +
Sbjct: 88 KTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIG---FEVIAVRDEAAMTR 144
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV-LFVGEALVGNDAVDQ 514
D +L+DTAG+ + + + + PD + L + ++ D ++
Sbjct: 145 ALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEI 204
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
++ F D+ IDGI+ TKFD G L + VS AP++ + GQ
Sbjct: 205 ITNFK----DIH-------IDGIVFTKFDETASS-GELLKIPAVSSAPIVLMTDGQ 248
>TIGR_CMR|BA_1718 [details] [associations]
symbol:BA_1718 "flagellar biosynthetic protein FlhF,
putative" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000897 InterPro:IPR003593 Pfam:PF00448
SMART:SM00382 GO:GO:0005525 GO:GO:0019861 EMBL:AE016879
GenomeReviews:AE016879_GR GO:GO:0017111 GO:GO:0006614 KO:K02404
RefSeq:NP_844153.1 ProteinModelPortal:Q81SE2 DNASU:1086348
EnsemblBacteria:EBBACT00000010753 GeneID:1086348 KEGG:ban:BA_1718
PATRIC:18781034 HOGENOM:HOG000133114 ProtClustDB:PRK06731
Uniprot:Q81SE2
Length = 270
Score = 124 (48.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 396 KSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIVAK 455
K+T LAK+A+ K +V D R G V+QL+ + + + FE +D A + +
Sbjct: 88 KTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIG---FEVIAVRDEAAMTR 144
Query: 456 EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLV-LFVGEALVGNDAVDQ 514
D +L+DTAG+ + + + + PD + L + ++ D ++
Sbjct: 145 ALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEI 204
Query: 515 LSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQ 570
++ F D+ IDGI+ TKFD G L + VS AP++ + GQ
Sbjct: 205 ITNFK----DIH-------IDGIVFTKFDETASS-GELLKIPAVSSAPIVLMTDGQ 248
>UNIPROTKB|Q48GG0 [details] [associations]
symbol:flhF "Flagellar biosynthesis protein FlhF"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0001539 "ciliary or flagellar motility" evidence=ISS]
[GO:0009288 "bacterial-type flagellum" evidence=ISS] [GO:0009296
"flagellum assembly" evidence=ISS] InterPro:IPR000897
InterPro:IPR003593 InterPro:IPR020006 Pfam:PF00448 SMART:SM00382
SMART:SM00962 GO:GO:0005525 GO:GO:0005886 GO:GO:0017111
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0009296 GO:GO:0001539
GO:GO:0009288 GO:GO:0006614 eggNOG:COG1419 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:YP_275523.1 ProteinModelPortal:Q48GG0
STRING:Q48GG0 GeneID:3559389 KEGG:psp:PSPPH_3365 PATRIC:19976136
Uniprot:Q48GG0
Length = 442
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 396 KSTNLAKVA--YWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
K+T LAK+A Y L ++ + + D+FR GA EQL+T R L VP+ DP
Sbjct: 235 KTTTLAKLAARYVLKYGPQNIALVSMDSFRIGAQEQLKTLGRILNVPVTHV----DPGQS 290
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMR 485
+A++ R VVL+DTAG +Q ++P +R
Sbjct: 291 LVQALEPLLRKR--VVLIDTAG-LQASDPALR 319
>UNIPROTKB|Q8ECD1 [details] [associations]
symbol:flhF "Flagellar polar localization control system
flagellar assembly determinant GTPase FlhF" species:211586
"Shewanella oneidensis MR-1" [GO:0001539 "ciliary or flagellar
motility" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 GO:GO:0009296 GO:GO:0001539 GO:GO:0006614 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:NP_718767.1 ProteinModelPortal:Q8ECD1
GeneID:1170905 KEGG:son:SO_3212 PATRIC:23526108 Uniprot:Q8ECD1
Length = 458
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 396 KSTNLAKVAYWLLQHKVS--VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
K+T+LAK+A H + V + D +R GA EQL T+ + + P+ ++ ++ +
Sbjct: 254 KTTSLAKLAARFAAHHGADQVALITTDHYRIGAYEQLATYGKIMGCPV-KQAHD----LA 308
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVD 513
E I RN +VL+DTAG Q + L + L L + + ++ + G V
Sbjct: 309 ELEQILYQFRNRK-LVLIDTAGMGQRDMRLYQQLDNLTANSRIPIRSYLVLSATGQRRVL 367
Query: 514 QLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
Q + + K LS G++LTK D GA LS++ SG P+ +V GQ
Sbjct: 368 QDAVNHFKRIPLS---------GVVLTKLDESVSLAGA-LSVLIQSGLPLSYVTDGQRVP 417
Query: 574 -DLK 576
D+K
Sbjct: 418 EDMK 421
>TIGR_CMR|SO_3212 [details] [associations]
symbol:SO_3212 "flagellar biosynthetic protein FlhF"
species:211586 "Shewanella oneidensis MR-1" [GO:0001539 "ciliary or
flagellar motility" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0009296 "flagellum assembly" evidence=ISS]
InterPro:IPR000897 InterPro:IPR003593 InterPro:IPR020006
Pfam:PF00448 SMART:SM00382 SMART:SM00962 GO:GO:0005525
GO:GO:0005886 GO:GO:0019861 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 GO:GO:0009296 GO:GO:0001539 GO:GO:0006614 KO:K02404
HOGENOM:HOG000254735 ProtClustDB:PRK05703 TIGRFAMs:TIGR03499
OMA:EPRQAWR RefSeq:NP_718767.1 ProteinModelPortal:Q8ECD1
GeneID:1170905 KEGG:son:SO_3212 PATRIC:23526108 Uniprot:Q8ECD1
Length = 458
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 396 KSTNLAKVAYWLLQHKVS--VMMAACDTFRSGAVEQLRTHARRLQVPIFEKGYEKDPAIV 453
K+T+LAK+A H + V + D +R GA EQL T+ + + P+ ++ ++ +
Sbjct: 254 KTTSLAKLAARFAAHHGADQVALITTDHYRIGAYEQLATYGKIMGCPV-KQAHD----LA 308
Query: 454 AKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVD 513
E I RN +VL+DTAG Q + L + L L + + ++ + G V
Sbjct: 309 ELEQILYQFRNRK-LVLIDTAGMGQRDMRLYQQLDNLTANSRIPIRSYLVLSATGQRRVL 367
Query: 514 QLSKFNQKLADLSSSPNPQLIDGILLTKFDTIDDKVGAALSMVYVSGAPVMFVGCGQSYT 573
Q + + K LS G++LTK D GA LS++ SG P+ +V GQ
Sbjct: 368 QDAVNHFKRIPLS---------GVVLTKLDESVSLAGA-LSVLIQSGLPLSYVTDGQRVP 417
Query: 574 -DLK 576
D+K
Sbjct: 418 EDMK 421
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 589 515 0.00088 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 84
No. of states in DFA: 610 (65 KB)
Total size of DFA: 271 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.55u 0.15s 41.70t Elapsed: 00:00:02
Total cpu time: 41.56u 0.15s 41.71t Elapsed: 00:00:02
Start: Mon May 20 18:10:35 2013 End: Mon May 20 18:10:37 2013